-- dump date   	20140619_155355
-- class       	Genbank::Feature
-- table       	feature
-- table       	main
-- field 1	id
-- field 2	type
-- field 3	name
-- field 4	contig
-- field 5	start_pos
-- field 6	end_pos
-- field 7	strand
-- field 8	description
-- field 9	chrom_position
-- field 10	organism
-- field 11	GeneID
-- header
-- id	type	name	contig	start_pos	end_pos	strand	description	chrom_position	organism	GeneID
362242000001	SEQ_END	SEQ_END	NC_005916.1	174155	174155	DR	NC_005916.1; contig end	174155..174155	Mycobacterium ulcerans Agy99	<NULL_VALUE>
362242000002	SEQ_END	SEQ_END	NC_008611.1	5631606	5631606	DR	NC_008611.1; contig end	5631606..5631606	Mycobacterium ulcerans Agy99	<NULL_VALUE>
YP_025523.1	CDS	rep	NC_005916.1	1	1107	D	MUP001, rep, len: 368 aa. Probable rep, similar to the Rep proteins on several Mycobacterial plasmids e.g. O32860 Rep of the plasmid pJAZ38 from Mycobacterium fortuitum (see Gavigan et al., 1997) (368 aa), fasta scores: opt: 1692, E(): 1.7e-96, (68.306% identity in 366 aa overlap); and Q938A1 RepA of the plasmid pVT2 from Mycobacterium avium (391 aa), fasta scores: opt: 1283, E(): 2.6e-71, (55.556% identity in 360 aa overlap); and Q48888 Rep of the plasmid pLR7 from Mycobacterium avium (360 aa). Also weakly similar to Q9ZHK2 Putative replication protein of the plasmid pSOX from Rhodococcus sp. X309 (368 aa), fasta scores: opt: 272, E(): 4.1e-09, (36.022% identity in 372 aa overlap). Contains Prosite match to entry PS50310 Alanine-rich region.; replication protein Rep	1..1107	Mycobacterium ulcerans Agy99	2846617
YP_025524.1	CDS	MUP002c	NC_005916.1	1117	1431	R	MUP002c, -, len: 104 aa. Hypothetical protein.; hypothetical protein	complement(1117..1431)	Mycobacterium ulcerans Agy99	2846606
YP_025525.1	CDS	MUP003	NC_005916.1	1694	2290	D	MUP003, -, len: 198 aa. Hypothetical protein. Contains a helix turn helix motif between aa 30->51, Standard_deviations: 4.86, score 1665.00.; hypothetical protein	1694..2290	Mycobacterium ulcerans Agy99	2846561
YP_025526.1	CDS	MUP004c	NC_005916.1	2310	2924	R	MUP004c, -, len: 204 aa. Hypothetical protein. An alternative start site exists at nt 2588.; hypothetical protein	complement(2310..2924)	Mycobacterium ulcerans Agy99	2846562
YP_025527.1	CDS	parA	NC_005916.1	2921	3901	R	MUP005c, parA, len: 326 aa. Possible parA, chromosome partitioning protein, similar to several e.g. O05189|PARA_CAUCR Chromosome partitioning protein parA from Caulobacter crescentus (267 aa), fasta scores: opt: 279, E(): 4.3e-10, (29.918% identity in 244 aa overlap); Q8G6J3|AAN24469 Chromosome partitioning protein P from Bifidobacterium longum (336 aa), fasta scores: opt: 324, E(): 7.3e-13, (30.085% identity in 236 aa overlap) and Q8KBD6 ATPase, ParA family from Chlorobium tepidum (265 aa), fasta scores: opt: 285, E(): 1.8e-10, (28.807% identity in 243 aa overlap). Contains a Pfam match to entry PF00991, ParA family ATPase.; chromosome partitioning protein ParA	complement(2921..3901)	Mycobacterium ulcerans Agy99	2846551
YP_025528.1	CDS	MUP006c	NC_005916.1	5640	6386	R	MUP006c, -, len: 248 aa. Hypothetical protein.; hypothetical protein	complement(5640..6386)	Mycobacterium ulcerans Agy99	2846563
YP_025529.1	CDS	MUP007c	NC_005916.1	6383	6604	R	MUP007c, -, len: 73 aa. Conserved hypothetical protein, some similarity to O33270|Rv0340 Hypothetical protein from M. tuberculosis (179 aa), fasta scores: opt: 88, E(): 21, (32.558% identity in 43 aa overlap); and Q8KKW1 Hypothetical protein on the symbiotic plasmid p42d from Rhizobium etli (108 aa), fasta scores: opt: 92, E(): 7.1, (58.333% identity in 24 aa overlap); and O52677 Core protein (Fragment) from Escherichia coli (193 aa), fasta scores: opt: 91, E(): 13, (31.818% identity in 66 aa overlap).; hypothetical protein	complement(6383..6604)	Mycobacterium ulcerans Agy99	2846564
YP_025530.1	CDS	MUP008c	NC_005916.1	6612	7160	R	MUP008c, -, len: 182 aa. Possible nucleic acid binding protein, similar to the C-terminus of several N utilization substance proteins e.g. O05818|NUSA_MYCTU|Rv2841c N utilization substance protein A from M. tuberculosis (347 aa), fasta scores: opt: 337, E(): 6.5e-14, (42.143% identity in 140 aa overlap); Q9HV54 N utilization substance protein A from Pseudomonas aeruginosa (493 aa), fasta scores: opt: 353, E(): 7.9e-15, (38.255% identity in 149 aa overlap); etc. Contains a possible Pfam match to entry PF00013 KH domain.; nucleic acid binding protein	complement(6612..7160)	Mycobacterium ulcerans Agy99	2846618
YP_025531.1	CDS	MUP009	NC_005916.1	7188	7616	D	MUP009, -, 142 aa. Hypothetical protein.; hypothetical protein	7188..7616	Mycobacterium ulcerans Agy99	2846574
YP_025532.1	CDS	MUP010	NC_005916.1	7630	8421	D	MUP010, -, len: 263 aa. Hypothetical protein.; hypothetical protein	7630..8421	Mycobacterium ulcerans Agy99	2846575
YP_025533.1	CDS	pknQ	NC_005916.1	8430	10412	D	MUP011, pknQ, len: 660 aa. Probable pknQ, transmembrane serine/threonine-protein kinase (EC 2.7.1.-), similar to several mycobacterial serine/threonine-protein kinases e.g. Q10697|PKNJ_MYCTU|Rv2088 from M. tuberculosis (589 aa), fasta scores: opt: 1121, E(): 2.9e-43, (43.45% identity in 527 aa overlap); P72003|PKNF_MYCTU|Rv1746 from M. tuberculosis (476 aa), fasta scores: opt: 761, E(): 4.2e-27, (38.661% identity in 463 aa overlap); Q9RLQ7 Putative serine/threonine protein kinase from M. bovis (291 aa), etc. And similar to serine/threonine-protein kinases from other bacteria e.g. Q9XA16 Putative serine/threonine protein kinase from Streptomyces coelicolor (673 aa), fasta scores: opt: 656, E(): 2.9e-22 (36.164% identity in 365 aa overlap). Contains a Prosite matches to entries PS50011 Protein kinase domain and PS00108, Serine/Threonine protein kinases active-site signature pattern. Belongs to the SER/THR family of protein kinases.; transmembrane serine/threonine-protein kinase PknQ	8430..10412	Mycobacterium ulcerans Agy99	2846552
YP_025534.1	CDS	MUP012c	NC_005916.1	10429	10692	R	MUP012c, -, len: 87 aa. Hypothetical protein. Some similarity to Antigen 84 from M. tuberculosis and M. leprae e.g. P46816|AG84_MYCTU|Rv2145c Antigen 84 from M. tuberculosis (260 aa), fasta scores: opt: 105, E(): 4.1, (36.735% identity in 49 aa overlap).; hypothetical protein	complement(10429..10692)	Mycobacterium ulcerans Agy99	2846576
YP_025535.1	CDS	MUP013c	NC_005916.1	10689	11147	R	MUP013c, -, len: 152 aa. Possible conserved membrane protein, some similarity to Q8EX03 Putative integral membrane protein from Mycoplasma penetrans (303 aa), fasta scores: opt: 106, E(): 14, (31.250% identity in 96 aa overlap). Contains two membrane spanning regions towards the N-terminus.; hypothetical protein	complement(10689..11147)	Mycobacterium ulcerans Agy99	2846612
YP_025536.1	CDS	MUP014c	NC_005916.1	11149	11922	R	MUP014c, -, len: 257 aa. Putative integral membrane protein, contains several membrane spanning regions. An alternative start codon exists downstream.; putative integral membrane protein	complement(11149..11922)	Mycobacterium ulcerans Agy99	2846613
YP_025537.1	CDS	MUP015c	NC_005916.1	11916	12692	R	MUP015c, -, len: 258 aa. Possible secreted protein, contains probable N-terminal signal sequence.; hypothetical protein	complement(11916..12692)	Mycobacterium ulcerans Agy99	2846614
YP_025538.1	CDS	MUP016c	NC_005916.1	12689	13480	R	MUP016c, -, len: 263 aa. Hypothetical protein. Contains a Prosite match to entry PS00152 ATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature; hypothetical protein	complement(12689..13480)	Mycobacterium ulcerans Agy99	2846615
YP_025539.1	CDS	MUP017c	NC_005916.1	13477	13929	R	MUP017c, -, len: 150 aa. Possible conserved transmembrane protein, weakly similar to O06254|Rv3437 possible conserved transmembrane protein from M. tuberculosis (158 aa), fasta scores: opt: 244, E(): 2.3e-05, (38.393% identity in 112 aa overlap). Contains a Prosite match to entry PS50099 PRO_RICH Proline-rich region. Contains hydrophobic region at the C-terminus.; transmembrane protein	complement(13477..13929)	Mycobacterium ulcerans Agy99	2846616
YP_025540.1	CDS	MUP018c	NC_005916.1	13973	15061	R	MUP018c, -, len: 362 aa. Probable forkhead-associated protein, similar to several other M. tuberculosis conserved hypothetical ala-rich proteins e.g. P96214|Rv3863 Hypothetical protein (392 aa), fasta scores: opt: 525, E(): 1.9e-25, (33.602% identity in 372 aa overlap); O50389|Rv3360 Hypothetical protein (122 aa), fasta scores: opt: 198, E(): 3.4e-05, (37.113% identity in 97 aa overlap); and similar to the N-terminus of O65934|Rv1747 hypothetical 92.2 kDa protein (ABC transporter, ATP-binding protein (865 aa), fasta scores: opt: 207, E(): 4.3e-05, (37.255% identity in 102 aa overlap). Contains a Prosite match to entries PS50006 FHA_DOMAIN Forkhead-associated (FHA) domain and PS50310 ALA_RICH Alanine-rich region. And a Pfam match to entry PF01381 HTH_3, Helix-turn-helix.; forkhead-associated protein	complement(13973..15061)	Mycobacterium ulcerans Agy99	2846607
YP_025541.1	CDS	MUP019	NC_005916.1	15406	16440	D	MUP019, -, len: 344 aa. Probable conserved membrane protein, weakly similar to several membrane associated proteins from M. tuberculosis e.g. to the C-terminus of two probable serine/threonine-protein kinases Q11053|PKNH_MYCTU|Rv1266c (626 aa), fasta scores: opt: 483, E(): 3.7e-16, (29.032% identity in 341 aa overlap); and PKNJ_MYCTU|Q10697|Rv2088 (589 aa), fasta scores: opt: 315, E(): 5.4e-08, (25.649% identity in 308 aa overlap). Also weakly similar to P96858|Rv3576 Possible lipoprotein lppH from M. tuberculosis (237 aa), fasta scores: opt: 380, E(): 1.9e-11, (29.918% identity in 244 aa overlap). Contains a Prosite match to entry PS50099 PRO_RICH Proline-rich region. Contains a membrane spanning region between aa 102 to 124.; hypothetical protein	15406..16440	Mycobacterium ulcerans Agy99	2846608
YP_025542.1	CDS	MUP020	NC_005916.1	16430	16612	D	MUP020, -, len: 60 aa. Conserved hypothetical protein, some similarity to Q983E1 Hypothetical protein mll8367 from Rhizobium loti (Mesorhizobium loti) (91 aa), fasta scores: opt: 92, E(): 4.5, (35.00% identity in 40 aa overlap).; hypothetical protein	16430..16612	Mycobacterium ulcerans Agy99	2846609
YP_025543.1	CDS	MUP021	NC_005916.1	16609	16872	D	MUP021, -, len: 87 aa. Possible transcriptional regulatory protein, similar to other possible WhiB-like regulatory proteins e.g. O69649|Rv3681c Probable whiB4 from M. tuberculosis (118 aa), fasta scores: opt: 141, E(): 0.001, (44.681% identity in 47 aa overlap); P96215|Rv3862c Possible whiB6 from M. tuberculosis (116 aa), fasta scores: opt: 133, E(): 0.0054, (29.412% identity in 85 aa overlap). Also weakly similar to other putative regulatory proteins e.g. Q9S2B9 Putative regulatory protein from Streptomyces coelicolor (112 aa), fasta scores: opt: 115, E(): 0.11, (34.211% identity in 76 aa overlap). Contains a Pfam match to entry PF02467 Transcription factor WhiB.; transcriptional regulatory protein	16609..16872	Mycobacterium ulcerans Agy99	2846610
YP_025544.1	CDS	MUP022	NC_005916.1	17287	18621	D	MUP022, -, len: 444 aa. Probable transposase for IS2606, highly similar to Q9ZG97 Probable transposase from M. ulcerans (444 aa), fasta scores: opt: 2409, E(): 5.3e-154, (97.872% identity in 376 aa overlap); and similar to O05912 Hypothetical 48.7 kDa protein (IS1554, transposase) from M. tuberculosis (439 aa), fasta scores: opt: 1675, E(): 1.1e-104, (68.564% identity in 369 aa overlap).; transposase for the insertion element IS2606	17287..18621	Mycobacterium ulcerans Agy99	2846611
YP_025545.1	CDS	MUP023c	NC_005916.1	18772	19404	R	MUP023c, -, len: 210 aa. Hypothetical protein.; hypothetical protein	complement(18772..19404)	Mycobacterium ulcerans Agy99	2846553
YP_025546.1	CDS	MUP024c	NC_005916.1	19401	19988	R	MUP024c, -, len: 195 aa. Hypothetical protein.; hypothetical protein	complement(19401..19988)	Mycobacterium ulcerans Agy99	2846554
YP_025547.1	CDS	MUP025	NC_005916.1	20718	22457	D	MUP025, -, len: 579 aa. Putative transposase, weakly similar to several putative transposases e.g. Q8R6J9 Transposase from Thermoanaerobacter tengcongensis (565 aa), fasta scores: opt: 315, E(): 5.2e-13, (22.095% identity in 525 aa overlap); O70063 Putative transposase from Mycobacterium smegmatis (503 aa), fasta scores: opt: 221, E(): 9.3e-07, (26.190% identity in 504 aa overlap); Q9Z681 Transposase from Mycoplasma mycoides subsp. mycoides SC (483 aa), fasta scores: opt: 221, E(): 9e-07, (23.288% identity in 365 aa overlap). Almost identical to MUP028 and highly similar to MUP037 but longer.; putative transposase	20718..22457	Mycobacterium ulcerans Agy99	2846555
YP_025548.1	CDS	MUP026	NC_005916.1	22629	23963	D	MUP026, -, len: 444 aa. Probable transposase for IS2606, highly similar to Q9ZG97 Probable transposase from M. ulcerans (444 aa), fasta scores: opt: 2874, E(): 3.8e-192, (98.423% identity in 444 aa overlap); and similar to O05912 Hypothetical 48.7 kDa protein (IS1554, transposase) from M. tuberculosis (439 aa), fasta scores: opt: 2063, E(): 1.1e-135, (71.034% identity in 435 aa overlap).; transposase for the insertion element IS2606	22629..23963	Mycobacterium ulcerans Agy99	2846556
YP_025549.1	CDS	MUP027c	NC_005916.1	24162	24980	R	MUP027c, -, len: 272 aa. Putative transposase, similar to several putative transposases e.g. P71924|Rv2424c Probable transposase for IS1558 from Mycobacterium tuberculosis (333 aa), fasta scores: opt: 755, E(): 1.7e-42, (45.118% identity in 297 aa overlap); Q8RAU1 Transposase from Thermoanaerobacter tengcongensis (405 aa), fasta scores: opt: 756, E(): 1.7e-42, (42.517% identity in 294 aa overlap). Contains a Pfam match to entry PF02371, Transposase IS116/IS110/IS902 family.; putative transposase	complement(24162..24980)	Mycobacterium ulcerans Agy99	2846538
YP_025550.1	CDS	MUP028c	NC_005916.1	25197	26936	R	MUP028c, -, len: 579 aa. Putative transposase, weakly similar to several putative transposases e.g. Q8R6J9 Transposase from Thermoanaerobacter tengcongensis (565 aa), fasta scores: opt: 315, E(): 6.8e-13, (22.095% identity in 525 aa overlap); O70063 Putative transposase from Mycobacterium smegmatis (503 aa), fasta scores: opt: 221, E(): 1.1e-06, (26.190% identity in 504 aa overlap); Q9Z681 Transposase from Mycoplasma mycoides subsp. mycoides SC (483 aa), fasta scores: opt: 221, E(): 1.1e-06, (23.288% identity in 365 aa overlap). Almost identical to MUP025 and highly similar to MUP037 but longer.; putative transposase	complement(25197..26936)	Mycobacterium ulcerans Agy99	2846539
YP_025551.1	CDS	MUP029c	NC_005916.1	26980	27321	R	MUP029c, -, len: 113 aa. Probable IS2404 transposase fragment, highly similar to the C-terminus of O07439 Putative transposase from Mycobacterium ulcerans (327 aa), fasta scores: opt: 496, E(): 3.7e-31, (94.805% identity in 77 aa overlap). Note that this homology extends across the upstream TAG stop codon into the upstream MUP030, suggesting a possible readthrough of the previous stop codon. No sequence errors have been identified and this insertion sequence containing the internal stop codon is repeated at two other locations on the plasmid, MUP047 + MUP048 and MUP062 + MUP063.; transposase for the insertion element IS2404 (fragment)	complement(26980..27321)	Mycobacterium ulcerans Agy99	2846540
YP_025552.1	CDS	MUP030c	NC_005916.1	27322	28026	R	MUP030c, -, len: 234 aa. Probable IS2404 transposase fragment, highly similar to O07439 Putative transposase from Mycobacterium ulcerans (327 aa), fasta scores: opt: 1839, E(): 2.4e-119, (92.949% identity in 312 aa overlap). Note that this homology extends across the stop codon and directly into MUP029, suggesting a possible readthrough of the TAG stop codon. No sequence errors have been identified and this insertion sequence containing the internal stop codon is repeated at two other locations on the plasmid, MUP047 + MUP048 and MUP062 + MUP063.; transposase for the insertion element IS2404 (fragment)	complement(27322..28026)	Mycobacterium ulcerans Agy99	2846541
YP_025553.1	CDS	MUP031c	NC_005916.1	28386	29720	R	MUP031c, -, len: 444 aa. Probable transposase for IS2606, highly similar to Q9ZG97 Probable transposase from Mycobacterium ulcerans (444 aa), fasta scores: opt: 2879, E(): 6.2e-188, (98.423% identity in 444 aa overlap); and to O05912 Hypothetical 48.7 kDa protein (IS1554, transposase) from M. tuberculosis (439 aa), fasta scores: opt: 2055, E(): 5e-132, (70.805% identity in 435 aa overlap).; transposase for the insertion element IS2606	complement(28386..29720)	Mycobacterium ulcerans Agy99	2846542
YP_025554.1	CDS	mlsB	NC_005916.1	30054	72446	R	MUP032c, mlsB, len: 14130 aa. Type I modular polyketide synthase, composed of a loading module and seven extender modules; required for the synthesis of the mycolactone side-chain in M. ulcerans (see Stinear et al., 2003). Similar to the modules in several other bacterial polyketide synthases e.g. Q93NX9 AmphI from Streptomyces nodosus (9510 aa), fasta scores: opt: 10163, E(): 0, (41.418% identity in 10394 aa overlap); Q9ALM3 Polyketide synthase extender modules 5-7 from Saccharopolyspora spinosa (4928 aa), fasta scores: opt: 8980, E(): 0, (46.330% identity in 4945 aa overlap); Q93HJ2 Modular polyketide synthase from Streptomyces avermitilis (4685 aa), fasta scores: opt: 5558, E(): 0, (44.649% identity in 4934 aa overlap). Contains 8 x Pfam matches to entry PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain and 8 x Pfam matches to entry PF02801 ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain. Contains 8 x Pfam matches to entry PF00550 pp-binding: Phosphopantetheine attachment site and 8 x Pfam matches to entry PF00698 Acyl_transf: Acyl transferase domain.; Type I modular polyketide synthase	complement(30054..72446)	Mycobacterium ulcerans Agy99	2846550
YP_025555.1	CDS	MUP033c	NC_005916.1	72536	72910	R	MUP033c, -, len: 124 aa. Putative transposase, similar in part to several transposases e.g. BAC67824 Putative transposase from Streptomyces avermitilis (239 aa), fasta scores: opt: 263, E(): 3.7e-12, (50.617% identity in 81 aa overlap); Q8KRD5 ISRh1 transposase-like protein from Rhodococcus erythropolis (236 aa), fasta score: opt: 257, E(): 1e-11, (64.286% identity in 56 aa overlap); Q982I3 Transposase from plasmid pMLa of Rhizobium loti (Mesorhizobium loti) (185 aa), fasta scores: opt: 200, E(): 1.6e-07, (37.209% identity in 86 aa overlap). Highly similar to MUP041.; putative transposase	complement(72536..72910)	Mycobacterium ulcerans Agy99	2846557
YP_025556.1	CDS	MUP034c	NC_005916.1	73008	73547	R	MUP034c, -, len: 179 aa. Putative transposase, weakly similar to several transposases from Xanthomonas e.g. Q8NL03 ISxac2 transposase from plasmid pXAC33 and pXAC64 of Xanthomonas axonopodis (275 aa), fasta scores: opt: 214, E(): 5.5e-07, (33.766% identity in 146 aa overlap); Q8PCU3 ISxcC1 transposase from Xanthomonas campestris (255 aa), fasta scores: opt: 198, E(): 3.8e-06, (34.286% identity in 105 aa overlap). Also weakly similar to Q9X9H9 IS1400 transposase B from Yersinia enterocolitica (294 aa), fasta scores: opt: 202, E(): 2.8e-06, (38.095% identity in 105 aa overlap). Almost identical to MUP042. Contains a Pfam match to entry PF00665 rve Integrase core domain.; putative transposase	complement(73008..73547)	Mycobacterium ulcerans Agy99	2846558
YP_025557.1	CDS	MUP035	NC_005916.1	74138	74851	D	MUP035, -, len: 237 aa. Putative transposase, similar to several transposases from Streptomyces e.g. BAC68344|Q82Q86 Putative transposase from Streptomyces avermitilis (354 aa), fasta scores: opt: 551, E(): 5.1e-23, (52.299% identity in 174 aa overlap); O69923 Putative transposase from Streptomyces coelicolor (379 aa), fasta score: opt: 309, E(): 7.6e-10, (35.897% identity in 195 aa overlap). And also weakly similar to BAC18219|Q8FPT1 Putative transposase from Corynebacterium efficiens (446 aa), fasta scores: opt: 435, E(): 8.5e-17, (39.487% identity in 195 aa overlap);and O07182|Rv0797 Putative transposase of IS1547 from M. tuberculosis (364 aa), fasta scores: opt: 225, E(): 3.5e-05, (31.818% identity in 154 aa overlap). Highly similar to MUP043 but shorter. Contains a Pfam match to entry PF01548 Transposase_9, Transposase.; putative transposase	74138..74851	Mycobacterium ulcerans Agy99	2846559
YP_025558.1	CDS	MUP036c	NC_005916.1	74905	76239	R	MUP036c, -, len: 444 aa. Probable transposase for IS2606, highly similar to Q9ZG97 Probable transposase from Mycobacterium ulcerans (444 aa), fasta scores: opt: 2878, E(): 5.8e-191, (98.198% identity in 444 aa overlap); and to O05912 Hypothetical 48.7 kDa protein (IS1554, transposase) from M. tuberculosis (439 aa), fasta scores: opt: 2042, E(): 2.3e-134, (71.628% identity in 435 aa overlap).; transposase for the insertion element IS2606	complement(74905..76239)	Mycobacterium ulcerans Agy99	2846560
YP_025559.1	CDS	MUP037	NC_005916.1	76556	77911	D	MUP037, -, len: 451. Putative transposase, weakly similar to several transposases from Thermoanaerobacter tengcongensis e.g. Q8R7J7 Transposase (565 aa), fasta scores: opt: 296, E(): 1.8e-10, (22.826% identity in 368 aa overlap); and Q8R6J9 Transposase (565 aa), fasta scores: opt: 292, E(): 3.5e-10, (22.283% identity in 368 aa overlap). And also weakly similar to O70063 Putative transposase from Mycobacterium smegmatis (503 aa), fasta scores: opt: 203, E(): 9.1e-05, (26.790% identity in 377 aa overlap). And highly similar to MUP025 and MUP028 but shorter.; putative transposase	76556..77911	Mycobacterium ulcerans Agy99	2846569
YP_025560.1	CDS	MUP038c	NC_005916.1	78019	78924	R	MUP038c, -, len: 301 aa. Possible thioesterase, similar to AAO65353|Q84CJ0 LanU-like protein from Streptomyces murayamaensis (249 aa), fasta scores: opt: 558, E(): 6.4e-30, (37.945% identity in 253 aa overlap); and weakly similar to weakly similar to Q98NH0 Lactone-specific esterase from Rhizobium loti (Mesorhizobium loti) (334 aa), fasta scores: opt: 175, E(): 0.00037, (23.675% identity in 283 aa overlap); Q9CD03|ML2603 Hypothetical protein from M. leprae (279 aa), fasta scores: opt: 153, E(): 0.0099, (33.051% identity in 118 aa overlap); Q9XAK3|SCO3599 Hypothetical protein from Streptomyces coelicolor (318 aa), fasta scores: opt: 160, E(): 0.0037, (28.261% identity in 276 aa overlap); and Q8PQF3 Hydrolase from Xanthomonas axonopodis (280 aa), fasta scores: opt: 158, E(): 0.0045, (30.769% identity in 130 aa overlap). Contains potential match to Pfam PF02230 Phospholipase/Carboxylesterase, Pfam PF00561 alpha/beta hydrolase fold.; thioesterase	complement(78019..78924)	Mycobacterium ulcerans Agy99	2846570
YP_025561.1	CDS	mlsA2	NC_005916.1	79080	86312	R	MUP039c, mlsA2, len: 2410 aa. Type I modular polyketide synthase, composed of one extender module (module 9); required for the synthesis of the mycolactone core in M. ulcerans (see Stinear et al., 2003). Similar to part of several e.g. Q9S0R8 Type I polyketide synthase AVES 1 from Streptomyces avermitilis (3972 aa), fasta scores: opt: 3342, E(): 2.1e-187, (40.556% identity in 2160 aa overlap); Q93NW8 AmphA from Streptomyces nodosus (1412 aa), fasta scores: opt: 3171, E(): 9.9e-178, (47.163% identity in 1304 aa overlap). Contains a Pfam match to entry PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain and a Pfam match to entry PF02801 ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain. Contains a Pfam match entry PF00550 pp-binding: Phosphopantetheine attachment site and a Pfam match to entry PF00698 Acyl_transf: Acyl transferase domain.; Type I modular polyketide synthase	complement(79080..86312)	Mycobacterium ulcerans Agy99	2846549
YP_025562.1	CDS	mlsA1	NC_005916.1	86299	137271	R	MUP040c, mlsA1, len: 16990 aa. Type I modular polyketide synthase, composed of a loading module and eight extender modules; required for the synthesis of the mycolactone core in M. ulcerans (see Stinear et al., 2003). Similar to the modules in several other bacterial polyketide synthases e.g. O33954 Tylactone synthase starter module and modules 1 & 2 from Streptomyces fradiae (4472 aa), fasta scores: opt: 5121, E(): 0, (41.958% identity in 4066 aa overlap); Q9ALM3 Polyketide synthase extender modules 5-7 from Saccharopolyspora spinosa (4928 aa), fasta scores: opt: 4860, E(): 0, (41.813% identity in 5515 aa overlap); and Q9ADL6 Soraphen polyketide synthase A from Polyangium cellulosum (6315 aa), fasta scores: opt: 4448, E(): 0, (39.533% identity in 6420 aa overlap). Contains 9 x Pfam matches to entry PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain and 9 x Pfam match to entry PF02801 ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain. Contains 9 x Pfam match entry PF00550 pp-binding: Phosphopantetheine attachment site and 9 x Pfam match to entry PF00698 Acyl_transf: Acyl transferase domain.; Type I modular polyketide synthase	complement(86299..137271)	Mycobacterium ulcerans Agy99	2846548
YP_025563.1	CDS	MUP041c	NC_005916.1	137361	137735	R	MUP041c, -, len: 124 aa. Putative transposase, similar in part to several transposases e.g. BAC67824 Putative transposase from Streptomyces avermitilis (239 aa), fasta scores: opt: 263, E(): 3.7e-12, (50.617% identity in 81 aa overlap); Q8KRD5 ISRh1 transposase-like protein from Rhodococcus erythropolis (236 aa), fasta score: opt: 257, E(): 9e-12, (64.286% identity in 56 aa overlap); Q982I3 Transposase from plasmid pMLa of Rhizobium loti (Mesorhizobium loti) (185 aa), fasta scores: opt: 200, E(): 1.5e-07, (37.209% identity in 86 aa overlap). Highly similar to MUP033.; putative transposase	complement(137361..137735)	Mycobacterium ulcerans Agy99	2846571
YP_025564.1	CDS	MUP042c	NC_005916.1	137833	138372	R	MUP042c, -, len: 179 aa. Putative transposase, weakly similar to several transposases from Xanthomonas e.g. Q8NL03 ISxac2 transposase from Xanthomonas axonopodis (275 aa), opt: 212, E(): 3.8e-07, (33.562% identity in 146 aa overlap); Q8PCU3 ISxcC1 transposase from Xanthomonas campestris (255 aa), fasta scores: opt: 198, E(): 3.4e-06, (34.286% identity in 105 aa overlap). Also weakly similar to Q9X9H9 IS1400 transposase B from Yersinia enterocolitica (294 aa), fasta scores: opt: 202, E(): 2e-06, (38.095% identity in 105 aa overlap). Almost identical to MUP034. Contains a Pfam match to entry PF00665 rve Integrase core domain.; putative transposase	complement(137833..138372)	Mycobacterium ulcerans Agy99	2846572
YP_025565.1	CDS	MUP043	NC_005916.1	138963	140018	D	MUP043, -, len: 351 aa. Putative transposase, similar to several putative transposases from Streptomyces e.g BAC68344|Q82Q86 Putative transposase from Streptomyces avermitilis (354 aa), fasta scores: opt: 1146, E(): 1.1e-63, (52.493% identity in 341 aa overlap); O69923 Putative transposase from Streptomyces coelicolor (379 aa), fasta scores: opt: 742, E(): 1.5e-38, (39.339% identity in 333 aa overlap). And similar to transposases from Corynebacterium efficiens e.g. BAC18308|Q8FTR3 Putative transposase (409 aa), fasta scores: opt: 993, E(): 4e-54, (45.210% identity in 334 aa overlap); BAC17059|Q8CMH0 Putative transposase (412 aa), fasta scores: opt: 947, E(): 2.9e-51, (43.413% identity in 334 aa overlap). Also weakly similar to Q8VJ30 IS1547, transposase from M. tuberculosis (596 aa), fasta scores: opt: 474, E(): 7.4e-22, (35.347% identity in 350 aa overlap). Contains a Pfam match to entry PF02371, Transposase_20, Transposase IS116/IS110/IS902 family. Highly similar to MUP035 but longer.; putative transposase	138963..140018	Mycobacterium ulcerans Agy99	2846573
YP_025566.1	CDS	MUP044c	NC_005916.1	140008	140148	R	MUP044c, -, len: 46 aa. Putative truncated transposase, similar to several transposases from Xanthomonas e.g. Q8P9Q3 IS1477 transposase from Xanthomonas campestris (88 aa), fasta scores: opt: 106, E(): 0.2, (55.882% identity in 34 aa overlap); and Q8PRI1 ISxac2 transposase from Xanthomonas axonopodis (88 aa), fasta scores: opt: 104, E(): 0.29, (48.571% identity in 35 aa overlap). And some similarity to MUP051.; transposase	complement(140008..140148)	Mycobacterium ulcerans Agy99	2846596
YP_025567.1	CDS	MUP045	NC_005916.1	140606	141592	D	MUP045, -, len: 328 aa. Probable beta-ketoacyl synthase-like protein, weakly similar to Q9KHD3 Type III beta-ketoacyl synthase-like protein from Streptomyces griseus subsp. griseus (345 aa), fasta scores: opt: 238, E(): 1e-07, (26.282% identity in 312 aa overlap). Most similar to Q54816 Daunorubicin-doxorubicin polyketide synthase from Streptomyces peucetius (353 aa), fasta scores: opt: 301, E(): 9.1e-12, (31.672% identity in 341 aa overlap); and also similar to several 3-oxoacyl-(acyl-carrier-protein) synthases e.g. Q9A8I4 3-oxoacyl-(acyl-carrier-protein) synthase III from Caulobacter crescentus (322 aa), fasta scores: opt: 259, E(): 4.3e-09, (26.935% identity in 323 aa overlap).; beta-ketoacyl synthase-like protein	140606..141592	Mycobacterium ulcerans Agy99	2846597
YP_025568.1	CDS	MUP046	NC_005916.1	142322	142615	D	MUP046, -, len: 97 aa. Possible membrane protein, some similarity to Q92RR3 Hypothetical protein R00794 from Rhizobium meliloti (275 aa), E(): 26, (36.634% identity in 101 aa overlap). Contains a membrane spanning region between aa 24 to 46.; hypothetical protein	142322..142615	Mycobacterium ulcerans Agy99	2846598
YP_025569.1	CDS	MUP047	NC_005916.1	143012	143716	D	MUP047, -, len: 234 aa. Probable IS2404 transposase fragment, highly similar to O07439 Putative transposase from Mycobacterium ulcerans (327 aa), fasta scores: opt: 1339, E(): 5.2e-84, (91.880% identity in 234 aa overlap). Note that this homology extends across the stop codon and directly into MUP048, suggesting a possible readthrough of the TAG stop codon. No sequence errors have been identified and this insertion sequence containing the internal stop codon is repeated at two other locations on the plasmid, MUP029 + MUP030 and MUP062 + MUP063.; transposase for the insertion element IS2404 (fragment)	143012..143716	Mycobacterium ulcerans Agy99	2846599
YP_025570.1	CDS	MUP048	NC_005916.1	143717	144058	D	MUP048, -, len: 113 aa. Probable IS2404 transposase fragment, highly similar to the C-terminus of O07439 Putative transposase from M. ulcerans (327 aa), fasta scores: opt: 496, E(): 6.8e-31, (94.80% identity in 77 aa overlap). Note that this homology extends across the upstream TAG stop codon into the upstream MUP047, suggesting a possible readthrough of the previous stop codon. No sequence errors have been identified and this insertion sequence containing the internal stop codon is repeated at two other locations on the plasmid, MUP029 + MUP030 and MUP062 + MUP063.; transposase for the insertion element IS2404 (fragment)	143717..144058	Mycobacterium ulcerans Agy99	2846600
YP_025571.1	CDS	MUP049c	NC_005916.1	144304	144693	R	MUP049c, -, len: 129 aa. Putative transposase, similar to several e.g. Q54335 Similar to ORF1 of the IS3 family from Streptomyces lividans (103 aa), fasta scores: opt: 225, E(): 2.9e-07, (44.565% identity in 92 aa overlap); and Q8XFW6 transposase from Brucella melitensis (93 aa), fasta scores: opt: 207, E(): 3.7e-06, (38.043% identity in 92 aa overlap); Q98A50 Transposase from Rhizobium loti (Mesorhizobium loti) (98 aa), fasta scores: opt: 204, E(): 6e-06, (37.234% identity in 94 aa overlap); Q8UJV4 Transposase from Agrobacterium tumefaciens plasmid AT (strain C58 / ATCC 33970) (96 aa), fasta scores: opt: 199, E(): 1.2e-05, (37.634% identity in 93 aa overlap). Contains a Pfam match to entry PF01527 Transposase_8, Transposase. Contains a helix turn helix motif between aa 58->79, tandard_deviations: 5.30, Score 1795.000.; putative transposase	complement(144304..144693)	Mycobacterium ulcerans Agy99	2846543
YP_025572.1	CDS	MUP050	NC_005916.1	144660	145994	D	MUP050, -, len: 444 aa. Probable transposase for IS2606, highly similar to Q9ZG97 Probable transposase from Mycobacterium ulcerans (444 aa), fasta scores: opt: 2878, E(): 2.7e-186, (98.423% identity in 444 aa overlap); and to O05912 Hypothetical 48.7 kDa protein (IS1554, transposase) from M. tuberculosis (439 aa), fasta scores: opt: 2053, E(): 1.2e-130, (70.805% identity in 435 aa overlap).; transposase for the insertion element IS2606	144660..145994	Mycobacterium ulcerans Agy99	2846544
YP_025573.1	CDS	MUP051	NC_005916.1	146252	146533	D	MUP051, -, len: 93 aa. Putative transposase, similar to several transposases from Rhizobium loti (Mesorhizobium loti) e.g. Q8KHM1 Putative insertion element transposase protein (88 aa), fasta scores: opt: 254, E(): 2.3e-10, (48.889% identity in 90 aa overlap). And weakly similar to several transposases from Yersinia e.g. O68709 Putative transposase from Yersinia pestis (88 aa), fasta scores: opt: 234, E(): 5.3e-09, (37.778% identity in 90 aa overlap). And some similarity to MUP044. Contains a Pfam match to entry PF01527, Transposase_8, Transposase. Contains helix turn helix motif between aa 27->48, Standard_deviations: 4.91, score 1680.00.; putative transposase	146252..146533	Mycobacterium ulcerans Agy99	2846545
YP_025574.1	CDS	MUP052	NC_005916.1	146563	147396	D	MUP052, -, len: 277 aa. Putative transposase, weakly similar to several transposases e.g Q89TF0 Blr2054 protein from Bradyrhizobium japonicum (290 aa), fasta scores: E(): 1.9e-27, (38.224% identity in 259 aa overlap); Q8U751 IS3 family transposase from Agrobacterium tumefaciens (strain C58 / ATCC 33970) (309 aa), fasta scores: opt: 549, E(): 1.3e-29, (39.068% identity in 279 aa overlap); Q8KJC6 Putative transposase for insertion sequence from Rhizobium loti (Mesorhizobium loti) (309 aa), fasta scores: opt: 528, E(): 2.5e-25 (35.836% identity in 293 aa overlap). Contains a Pfam match to PF00665 rve, Integrase core domain and a PS50316 histidine-rich region.; putative transposase	146563..147396	Mycobacterium ulcerans Agy99	2846546
YP_025575.1	CDS	cyp150	NC_005916.1	147546	148859	R	MUP053c, cyp150, len: 437 aa. Probable cyp150, cytochrome p450 (EC 1.14.-.-), similar to O08464|C140_MYCTU|Rv1880c Probable cytochrome P450 140 from M. tuberculosis (438 aa), fasta scores: opt: 1873, E(): 6.7e-117, (62.529% identity in 435 aa overlap). And weakly similar to numerous others e.g. Q89G11|BAC51802 Bll6537 protein from Bradyrhizobium japonicum (433 aa), fasta scores: opt: 755, E(): 6.1e-41 (34.925% identity in 398 aa overlap); and Q9X8Q3 Putative cytochrome P450 from Streptomyces coelicolor (411 aa), fasta scores: E(): 2.9e-36, (34.063% identity in 411 aa overlap). Contains a Pfam match to entry PF00067, Cytochrome P450. Belongs to the cytochrome P450 family.; cytochrome p450 150 cyp150	complement(147546..148859)	Mycobacterium ulcerans Agy99	2846568
YP_025576.1	CDS	MUP054c	NC_005916.1	148856	149359	R	MUP054c, -, len: 167 aa. Possible integrase fragment, weakly similar to several e.g. AAO22922 Integrase/recombinase from Myxococcus xanthus (300 aa), fasta scores: opt: 176, E(): 0.00018, (37.4% identity in 107 aa overlap); Q8NNZ9 Integrase from Corynebacterium glutamicum (Brevibacterium flavum) (308 aa), fasta scores: opt: 169, E(): 0.00054, (33.33% identity in 84 aa overlap); and Q8L3A3 Putative integrase/recombinase Xer from Bacillus stearothermophilus (304 aa), fasta scores: opt: 168, E(): 0.00063, (33.02% identity in 106 aa overlap). Contains a Pfam match to entry PF00589 Phage_integrase Phage integrase family.; integrase fragment	complement(148856..149359)	Mycobacterium ulcerans Agy99	2846547
YP_025577.1	CDS	MUP055	NC_005916.1	149323	150657	D	MUP055, -, len: 444 aa. Probable transposase for IS2606, highly similar to Q9ZG97 Probable transposase from Mycobacterium ulcerans (444 aa), fasta scores: opt: 2879, E(): 1.7e-184, (98.198% identity in 444 aa overlap); and to O05912 Hypothetical 48.7 kDa protein (IS1554, transposase) from M. tuberculosis (439 aa), fasta scores: opt: 2055, E(): 1.9e-129, (70.575% identity in 435 aa overlap).; transposase for the insertion element IS2606	149323..150657	Mycobacterium ulcerans Agy99	2846577
YP_025578.1	CDS	MUP056c	NC_005916.1	150862	151242	R	MUP056c, -, len: 126 aa. Hypothetical protein.; hypothetical protein	complement(150862..151242)	Mycobacterium ulcerans Agy99	2846578
YP_025579.1	CDS	MUP057c	NC_005916.1	151341	152117	R	MUP057c, -, len: 258 aa. Possible lipoprotein, weakly similar to Q49597 MK35 lipoprotein precursor from Mycobacterium kansasii (225 aa), fasta scores: opt: 139, E(): 0.21, (27.059% identity in 170 aa overlap); and weakly similar at the N-terminus to Q8XCD1 Hypothetical protein z2967 from Escherichia coli O157:H7 (115 aa), fasta scores: opt: 148, E(): 0.037, (29.167% identity in 96 aa overlap). Has signal peptide and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site.; lipoprotein	complement(151341..152117)	Mycobacterium ulcerans Agy99	2846579
YP_025580.1	CDS	MUP058c	NC_005916.1	152314	153351	R	MUP058c, -, len: 345 aa. Possible site-specific recombinase, weakly similar to several e.g. Q8U9U6 Site-specific recombinase from Agrobacterium tumefaciens (strain C58 / ATCC 33970) (331 aa), fasta scores: opt: 278, E(): 1.6e-11, (26.441% identity in 295 aa overlap)Q9JW14 Putative integrase/recombinase from Neisseria meningitidis (serogroup A) (305 aa), fasta scores: opt: 271, E(): 4.6e-11, (28.808% identity in 302 aa overlap); and O31206 Site-specific recombinase from Proteus mirabilis (313 aa), fasta scores: opt: 258, E(): 3.7e-10 (31.010% identity in 287 aa overlap). Contains Pfam match entries to PF02899 Phage integrase and PF00589 Phage integrase family.; site-specific recombinase	complement(152314..153351)	Mycobacterium ulcerans Agy99	2846580
YP_025581.1	CDS	MUP059c	NC_005916.1	153595	154641	R	MUP059c, -, len: 348 aa. Probable transposase for IS2404, highly similar to O07439 Putative transposase from Mycobacterium ulcerans (327 aa), fasta scores: opt: 1839, E(): 2.4e-119, (92.949% identity in 312 aa overlap).; transposase for the insertion element IS2404	complement(153595..154641)	Mycobacterium ulcerans Agy99	2846586
YP_025582.1	CDS	MUP060	NC_005916.1	155147	155668	D	MUP060, -, len: 173 aa. Probable IS2606 transposase fragment, highly similar to the N-terminus of Q9ZG97 Probable transposase from Mycobacterium ulcerans (444 aa), fasta scores: opt: 886, E(): 1.8e-52, (84.615% identity in 169 aa overlap); and to the N-terminus of O05912 Hypothetical 48.7 kDa protein (IS1554, transposase) from M. tuberculosis (439 aa), fasta scores: opt: 506, E(): 1.1e-26, (60.000% identity in 135 aa overlap). The transposase described here may be made by a frame shifting mechanism during translation that fuses MUP060 and MUP061, no sequence errors have been identified to account for this.; transposase for the insertion element IS2606 (fragment)	155147..155668	Mycobacterium ulcerans Agy99	2846587
YP_025583.1	CDS	MUP061	NC_005916.1	155574	156482	D	MUP061, -, len: 302 aa. Probable IS2606 transposase fragment, highly similar to the C-terminus of Q9ZG97 Probable transposase from Mycobacterium ulcerans (444 aa), fasta scores: opt: 1990, E(): 2.8e-132, (98.675% identity in 302 aa overlap); and to the C-terminus of O05912 Hypothetical 48.7 kDa protein (IS1554, transposase) from M. tuberculosis (439 aa), fasta scores: opt: 1544, E(): 6.9e-101, (75.166% identity in 302 aa overlap). The transposase described here may be made by a frame shifting mechanism during translation that fuses MUP060 and MUP061, no sequence errors have been identified to account for this.; transposase for the insertion element IS2606 (fragment)	155574..156482	Mycobacterium ulcerans Agy99	2846588
YP_025584.1	CDS	MUP062	NC_005916.1	156842	157546	D	MUP062, -, len: 234 aa. Probable IS2404 transposase fragment, highly similar to O07439 Putative transposase from M. ulcerans (327 aa), fasta scores: opt: 1333, E(): 2.7e-84, (91.880% identity in 234 aa overlap). Note that this homology extends across the stop codon and directly into MUP063, suggesting a possible readthrough of the TAG stop codon. No sequence errors have been identified and this insertion sequence containing the internal stop codon is repeated at two other locations on the plasmid, MUP029 + MUP030 and MUP047 + MUP048.; transposase for the insertion element IS2404 (fragment)	156842..157546	Mycobacterium ulcerans Agy99	2846589
YP_025585.1	CDS	MUP063	NC_005916.1	157547	157888	D	MUP063, -, len: 113 aa. Probable IS2404 transposase fragment, highly similar to the C-terminus of O07439 Putative transposase from M. ulcerans (327 aa), fasta scores: opt: 503, E(): 1.9e-31, (96.104% identity in 77 aa overlap). Note that this homology extends across the upstream TAG stop codon into the upstream MUP062, suggesting a possible readthrough of the previous stop codon. No sequence errors have been identified and this insertion sequence containing the internal stop codon is repeated at two other locations on the plasmid, MUP029 + MUP030 and MUP047 + MUP048.; transposase for the insertion element IS2404 (fragment)	157547..157888	Mycobacterium ulcerans Agy99	2846590
YP_025586.1	CDS	MUP064c	NC_005916.1	157889	158251	R	MUP064c, -, len: 120 aa. Possible conserved membrane protein, shows some similarity with other putative membrane proteins e.g. C-terminus of O06345|Rv3482c Probable conserved membrane protein from M. tuberculosis (260 aa), fasta scores: opt: 129, E(): 0.39, (30.233% identity in 86 aa overlap). And show some similarity to Mycobacteriophage proteins e.g. AAN12600 Gp39 from Mycobacteriophage (132 aa), fasta score: E(): 0.055, (40.000% identity in 50 aa overlap). Contains several membrane spanning regions towards the C-terminus.; hypothetical protein	complement(157889..158251)	Mycobacterium ulcerans Agy99	2846601
YP_025587.1	CDS	MUP065c	NC_005916.1	158471	159352	R	MUP065c, -, len: 293 aa. Conserved hypothetical protein, weakly similar at the N-terminus to several hypothetical proteins e.g. Q8U687 Hypothetical protein Atu6048 from Agrobacterium tumefaciens (strain C58 / ATCC 33970) (836 aa), fasta scores: opt: 223, E(): 8.2e-07, (30.000% identity in 170 aa overlap); and also some similarity at the N-terminus to several helicases e.g. AAO50170 Putative helicase from Streptomyces violaceoruber (866 aa), fasta scores: E(): 1.1e-09, (33.032% identity in 221 aa overlap); and P44701|SRMB_HAEIN ATP-dependent RNA helicase srmB homolog from Haemophilus influenzae (439 aa), fasta scores: opt: 124, E(): 1.9, (31.429% identity in 105 aa overlap). Contains a Pfam match to entry PF00270, DEAD/DEAD box helicase.; hypothetical protein	complement(158471..159352)	Mycobacterium ulcerans Agy99	2846602
YP_025588.1	CDS	MUP066c	NC_005916.1	159824	160330	R	MUP066c, -, len: 168 aa. Conserved hypothetical protein, weakly similar to several bacteriophage-related proteins e.g. P03796|Y77_BPT7 Hypothetical gene 7.7 protein from Bacteriophage T7 (130 aa), fasta scores: opt: 171, E(): 0.0002, (32.075% identity in 106 aa overlap); and Q8XUF2 Putative bacteriophage-related protein from Ralstonia solanacearum (Pseudomonas solanacearum) (183 aa), fasta scores: opt: 163, E(): 0.00089, (32.773% identity in 119 aa overlap). Contains a Prosite match to entry PS00029 LEUCINE_ZIPPER Leucine zipper pattern.; hypothetical protein	complement(159824..160330)	Mycobacterium ulcerans Agy99	2846603
YP_025589.1	CDS	MUP067c	NC_005916.1	160417	161049	R	MUP067c, -, len: 210 aa. Conserved hypothetical protein, weak similarity to N-terminus of spermidine synthases e.g. Q82EU4 Putative spermidine synthase from Streptomyces avermitilis (548 aa), FASTA scores: opt: 124, E(): 2.5, (34.091% identity in 88 aa overlap); and weak similarity to N-terminus of O87639|SCO3941 Putative serine/threonine phosphatase from Streptomyces coelicolor (368 aa), fasta scores: opt: 112, E(): 12, (27.919% identity in 197 aa overlap).; hypothetical protein	complement(160417..161049)	Mycobacterium ulcerans Agy99	2846604
YP_025590.1	CDS	MUP068c	NC_005916.1	161085	162215	R	MUP068c, -, len: 376 aa. Conserved membrane protein, similar to several Mycobacterial membrane proteins e.g. O53933|Rv1782 (506 aa) from M. tuberculosis, fasta scores: opt: 763, E(): 1.8e-34, (41.935% identity in 341 aa overlap); Q9Z5I3 Hypothetical 53.9 kDa protein (Conserved membrane protein) from M. leprae (506 aa), fasta scores: opt: 733, E(): 4.2e-32, (38.596% identity in 399 aa overlap); and the M. tuberculosis proteins Rv3895c, Rv0283, Rv3869 and Rv3450c. And also weakly similar to other bacterial hypothetical proteins e.g. Q8NSU6 Hypothetical protein Cgl0571 from Corynebacterium glutamicum (419 aa), fasta scores: opt: 349, E(): 4.3e-12, (31.818% identity in 242 aa overlap). Contains a Pfam match to entry PF05108 DUF690, protein of unknown function and a Prosite match to entry PS50310 alanine-rich region. Contains a possible N-terminal signal sequence.; hypothetical protein	complement(161085..162215)	Mycobacterium ulcerans Agy99	2846605
YP_025591.1	CDS	MUP069c	NC_005916.1	162445	163779	R	MUP069c, -, len: 444 aa. Probable transposase for IS2606, highly similar to Q9ZG97 Probable transposase from Mycobacterium ulcerans (444 aa), fasta scores: opt: 2867, E(): 8e-184, (97.973% identity in 444 aa overlap); and to O05912 Hypothetical 48.7 kDa protein (IS1554, transposase) from M. tuberculosis (439 aa), fasta scores: opt: 2043, E(): 9.7e-129, (70.345% identity in 435 aa overlap).; transposase for the insertion element IS2606	complement(162445..163779)	Mycobacterium ulcerans Agy99	2846581
YP_025592.1	CDS	MUP070c	NC_005916.1	163727	164824	R	MUP070c, -, len: 365 aa. Conserved hypothetical protein, weakly similar to part of Q9KYC4 Hypothetical protein SCO6906 from Streptomyces coelicolor (529 aa), fasta scores: opt: 185, E(): 0.0015, (27.305% identity in 282 aa overlap). Similarity to Q9KYC4 begins in the upstream CDS, and this could be accounted for by a frameshift, although the sequence has been checked and no discrepancy was found.; hypothetical protein	complement(163727..164824)	Mycobacterium ulcerans Agy99	2846582
YP_025593.1	CDS	MUP071c	NC_005916.1	164673	165089	R	MUP071c, -, len: 138 aa. Conserved hypothetical protein, weakly similar to the N-terminus of Q9KYC4 Hypothetical protein SCO6906 from Streptomyces coelicolor (529 aa), fasta scores: opt: 153, E(): 0.0041, (29.060% identity in 117 aa overlap). Similarity to Q9KYC4 continues in the following CDS, and this could be accounted for by a frameshift, although the sequence has been checked and no discrepancy was found.; hypothetical protein	complement(164673..165089)	Mycobacterium ulcerans Agy99	2846583
YP_025594.1	CDS	MUP072c	NC_005916.1	165161	166357	R	MUP072c, -, len: 398 aa. Conserved hypothetical protein, some similarity to proteins from Caenorhabditis elegans e.g. Q20739 F54B11.2 protein (304 aa), fasta scores: opt: 192, E(): 0.017, (39.216% identity in 102 aa overlap); and CAE11316 C. elegans COL-185 protein (305 aa), fasta scores: opt: 185, E(): 0.039, (38.235% identity in 102 aa overlap). Contains a Prosite match to entry PS50310 ALA_RICH Alanine-rich region.; hypothetical protein	complement(165161..166357)	Mycobacterium ulcerans Agy99	2846584
YP_025595.1	CDS	MUP073c	NC_005916.1	166354	167547	R	MUP073c, -, len: 397 aa. Conserved hypothetical protein. Some similarity to part of Q9Z5I9|IF2_MYCLE|ML1556 Translation initiation factor IF-2 from M. leprae (924 aa), fasta scores: opt: 228, E(): 0.0023, (26.997% identity in 363 aa overlap). Contains a Prosite match to entry PS00015 NUCLEAR Bipartite nuclear targeting sequence.; hypothetical protein	complement(166354..167547)	Mycobacterium ulcerans Agy99	2846585
YP_025596.1	CDS	MUP074c	NC_005916.1	167568	168152	R	MUP074c, -, len: 194 aa. Possible membrane protein, weakly similar to several bacterial membrane and hypothetical proteins e.g. O53200|Rv2473 Hypothetical protein from M. tuberculosis (238 aa), fasta scores: opt: 155, E(): 0.18, (25.248% identity in 202 aa overlap); O86726 Hypothetical protein SCO6544 from Streptomyces coelicolor (226 aa), fasta scores: opt: 155, E(): 0.18, (25.405% identity in 185 aa overlap). Contains a Prosite match to entry PS50310 ALA_RICH Alanine-rich region. Contains hydrophobic region in the N-terminus.; hypothetical protein	complement(167568..168152)	Mycobacterium ulcerans Agy99	2846591
YP_025597.1	CDS	MUP075c	NC_005916.1	168149	168487	R	MUP075c, -, len: 112 aa. Hypothetical protein, some similarity to part of Q8Y3B8 Probable substrate-binding transmembrane protein from Ralstonia solanacearum (Pseudomonas solanacearum) (801 aa), fasta scores: opt: 131, E(): 1.1, (33.33% identity in 102 aa overlap). Contains a Prosite match to entry PS50310 ALA_RICH Alanine-rich region.; hypothetical protein	complement(168149..168487)	Mycobacterium ulcerans Agy99	2846592
YP_025598.1	CDS	MUP076c	NC_005916.1	168487	169158	R	MUP076c, -, len: 223 aa. Possible membrane protein, contains a membrane spanning region between aa 57 to 79. Contains a Prosite match to entry PS50099 PRO_RICH Proline-rich region.; hypothetical protein	complement(168487..169158)	Mycobacterium ulcerans Agy99	2846593
YP_025599.1	CDS	MUP077c	NC_005916.1	169192	169584	R	MUP077c, -, len: 130 aa. Conserved hypothetical protein, weakly similar to P71600|Y030_MYCTU|Rv0030 Hypothetical protein from M. tuberculosis (109 aa), fasta scores: opt: 122, E(): 0.42, (27.660% identity in 94 aa overlap); and O69744|Rv3880c Hypothetical protein from M. tuberculosis (115 aa), fasta scores: opt: 112, E(): 2.1, (29.000% identity in 100 aa overlap).; hypothetical protein	complement(169192..169584)	Mycobacterium ulcerans Agy99	2846594
YP_025600.1	CDS	MUP078c	NC_005916.1	169759	171342	R	MUP078c, -, len: 527 aa. Conserved hypothetical protein, weakly similar to Q10691|YK83_MYCTU|Rv2083 Hypothetical protein from M. tuberculosis (314 aa), fasta scores: opt: 229, E(): 0.0041, (32.597% identity in 181 aa overlap); Q8WTL8 Hypothetical 37.7 kDa protein from Caenorhabditis elegans (435 aa), fasta scores: opt: 233, E(): 0.0034, (32.093% identity in 215 aa overlap); and also weakly similar to several PGRS-family proteins e.g. O53884|Rv0872c|PE_PGRS15 PGRS-family protein from M. tuberculosis (606 aa), fasta scores: opt: 220, E(): 0.016, (25.686% identity in 510 aa overlap). Contains a Prosite match to entry PS00029 LEUCINE_ZIPPER Leucine zipper pattern.; hypothetical protein	complement(169759..171342)	Mycobacterium ulcerans Agy99	2846595
YP_025601.1	CDS	MUP079c	NC_005916.1	171361	171660	R	MUP079c, -, len: 99 aa. Conserved hypothetical protein, weakly similar to P71598|Y028_MYCTU|Rv0028 Hypothetical protein from M. tuberculosis (101 aa), fasta scores: opt: 93, E(): 11, (32.558% identity in 86 aa overlap); and some similarity to Q51652 DNA primase (Fragment) from Escherichia coli (489 aa), fasta scores: opt: 101, E(): 11, (29.762% identity in 84 aa overlap).; hypothetical protein	complement(171361..171660)	Mycobacterium ulcerans Agy99	2846565
YP_025602.1	CDS	MUP080c	NC_005916.1	171667	171939	R	MUP080c, -, len: 90 aa. Conserved hypothetical protein, weakly similar to P71597|Y027_MYCTU|Rv0027 Hypothetical protein from M. tuberculosis (105 aa), fasta scores: opt: 117, E(): 0.3, (26.966% identity in 89 aa overlap).; hypothetical protein	complement(171667..171939)	Mycobacterium ulcerans Agy99	2846566
YP_025603.1	CDS	MUP081c	NC_005916.1	172002	173546	R	MUP081c, -, len: 514 aa. Conserved hypothetical protein, weakly similar to P71596|YO26_MYCTU|Rv0026 Hypothetical protein from M. tuberculosis (448 aa), fasta scores: opt: 501 E(): 6.9e-15, (31.989% identity in 372 aa overlap). Contains a Prosite match to entry PS00017 ATP_GTP_A- ATP/GTP-binding site motif A (P-loop).; hypothetical protein	complement(172002..173546)	Mycobacterium ulcerans Agy99	2846567
YP_904252.1	CDS	dnaA	NC_008611.1	1	1533	D	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein	1..1533	Mycobacterium ulcerans Agy99	4553245
YP_904253.1	CDS	dnaN	NC_008611.1	2072	3280	D	binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta	2072..3280	Mycobacterium ulcerans Agy99	4553246
YP_904254.1	CDS	recF	NC_008611.1	3301	4458	D	Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F	3301..4458	Mycobacterium ulcerans Agy99	4553247
YP_904255.1	CDS	MUL_0004	NC_008611.1	4455	5018	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	4455..5018	Mycobacterium ulcerans Agy99	4553248
YP_904256.1	CDS	gyrB	NC_008611.1	5228	7306	D	negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B	5228..7306	Mycobacterium ulcerans Agy99	4553249
YP_904257.1	CDS	gyrA	NC_008611.1	7346	9865	D	negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A	7346..9865	Mycobacterium ulcerans Agy99	4553250
YP_904258.1	CDS	MUL_0007	NC_008611.1	9949	10947	D	membrane protein; hypothetical protein	9949..10947	Mycobacterium ulcerans Agy99	4553251
YP_904259.1	CDS	MUL_0010	NC_008611.1	11361	12197	D	cytoplasmic protein; hypothetical protein	11361..12197	Mycobacterium ulcerans Agy99	4553254
YP_904260.1	CDS	MUL_0011	NC_008611.1	12225	12986	R	cytoplasmic protein; transcription; transcriptional regulator	complement(12225..12986)	Mycobacterium ulcerans Agy99	4553255
YP_904261.1	CDS	MUL_0012	NC_008611.1	13097	13501	R	cytoplasmic protein; hypothetical protein	complement(13097..13501)	Mycobacterium ulcerans Agy99	4553256
YP_904262.1	CDS	ppiA	NC_008611.1	13691	14239	D	Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; Ppiases accelerate the folding of proteins [catalytic activity: cis-trans isomerization of proline imidic peptide bonds in oligopeptides]; peptidyl-prolyl cis-trans isomerase A, PpiA	13691..14239	Mycobacterium ulcerans Agy99	4553257
YP_904263.1	CDS	MUL_0014	NC_008611.1	14250	14675	R	membrane protein; hypothetical protein	complement(14250..14675)	Mycobacterium ulcerans Agy99	4553258
YP_904264.1	CDS	MUL_0015	NC_008611.1	14831	15112	R	integral membrane protein involved in inhibition of the Z-ring formation; putative septation inhibitor protein	complement(14831..15112)	Mycobacterium ulcerans Agy99	4552742
YP_904265.1	CDS	MUL_0016	NC_008611.1	15241	15984	D	membrane protein; hypothetical protein	15241..15984	Mycobacterium ulcerans Agy99	4552743
YP_904266.1	CDS	trpG	NC_008611.1	16022	16708	D	aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II	16022..16708	Mycobacterium ulcerans Agy99	4552744
YP_904267.1	CDS	pknB	NC_008611.1	16686	18566	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in signal transduction (via phosphorylation) thought to regulate cell division/differentiation. can phosphorylate the peptide substrate myelin basic protein (MBP) [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; serine/threonine-protein kinase B PknB	complement(16686..18566)	Mycobacterium ulcerans Agy99	4552745
YP_904268.1	CDS	pknA	NC_008611.1	18563	19921	R	membrane protein; involved in signal transduction (via phosphorylation) thought to regulate morphological changes associated with cell division/differentiation process. phosphorylates at serine and threonine residues [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; serine/threonine-protein kinase a PknA	complement(18563..19921)	Mycobacterium ulcerans Agy99	4552746
YP_904269.1	CDS	pbpA	NC_008611.1	19918	21393	R	membrane protein; involved in peptidoglycan synthesis (at the final stages) cell wall formation; PbpA is supposed to be responsible for the determination of the rod shape of the cell. its synthesizes cross-linked peptidoglycan from lipid intermediates.; penicillin-binding protein PbpA	complement(19918..21393)	Mycobacterium ulcerans Agy99	4552747
YP_904270.1	CDS	rodA	NC_008611.1	21390	22799	R	membrane protein; this is a septum-peptidoglycan biosynthetic protein, involved in cell wall formation. plays a role in the stabilization of the FtsZ ring during cell division.; cell division protein RodA	complement(21390..22799)	Mycobacterium ulcerans Agy99	4552748
YP_904271.1	CDS	pstP	NC_008611.1	22796	24355	R	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; involved in regulation (using dephosphorylation of a specific phosphorylated substrate); serine/threonine phosphatase PstP	complement(22796..24355)	Mycobacterium ulcerans Agy99	4552749
YP_904272.1	CDS	MUL_0023	NC_008611.1	24352	24819	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(24352..24819)	Mycobacterium ulcerans Agy99	4552750
YP_904273.1	CDS	MUL_0024	NC_008611.1	24953	26551	R	Detected in the cytoplasmic and secreted fractions by 2D-LC-MS/MS.; secreted protein; function unknown, contains FHA domain; hypothetical protein	complement(24953..26551)	Mycobacterium ulcerans Agy99	4552751
YP_904274.1	CDS	MUL_0025	NC_008611.1	26845	28179	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	26845..28179	Mycobacterium ulcerans Agy99	4552752
YP_904275.1	CDS	MUL_0027	NC_008611.1	28617	29372	D	cytoplasmic protein; glycosylase	28617..29372	Mycobacterium ulcerans Agy99	4552754
YP_904276.1	CDS	MUL_0028	NC_008611.1	29488	30162	R	cytoplasmic protein; short-chain dehydrogenase	complement(29488..30162)	Mycobacterium ulcerans Agy99	4552755
YP_904277.1	CDS	MUL_0029	NC_008611.1	30440	31192	D	cytoplasmic protein; hypothetical protein	30440..31192	Mycobacterium ulcerans Agy99	4552756
YP_904278.1	CDS	MUL_0032	NC_008611.1	32216	32920	R	membrane protein; hypothetical protein	complement(32216..32920)	Mycobacterium ulcerans Agy99	4552164
YP_904279.1	CDS	proV_1	NC_008611.1	33021	34220	R	membrane protein; thought to be involved in active transport of osmoprotectant (glycine betaine/carnitine/choline/L- proline) across the membrane (import) responsible for energy coupling to the transport system.; osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport ATP-binding protein ABC transporter ProV	complement(33021..34220)	Mycobacterium ulcerans Agy99	4552165
YP_904280.1	CDS	MUL_0034	NC_008611.1	34213	34860	R	membrane protein; maybe involved in active transport of osmoprotectant (glycine betaine/carnitine/choline/L- proline) across the membrane (import) responsible for the translocation of the substrate across the membrane.; ABC transporter permease	complement(34213..34860)	Mycobacterium ulcerans Agy99	4552166
YP_904281.1	CDS	MUL_0035	NC_008611.1	35179	35586	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; DNA-binding protein	35179..35586	Mycobacterium ulcerans Agy99	4552167
YP_904282.1	CDS	MUL_0036	NC_008611.1	35688	36635	R	hypothetical protein	complement(35688..36635)	Mycobacterium ulcerans Agy99	4552168
YP_904283.1	CDS	amt_1	NC_008611.1	36765	38078	D	membrane protein; thought to be involved in transport of ammonium across the membrane (export) responsible for the translocation of the substrate across the membrane.; ammonium-transport integral membrane protein, Amt	36765..38078	Mycobacterium ulcerans Agy99	4552169
YP_904284.1	CDS	MUL_0038	NC_008611.1	38088	38387	R	cytoplasmic protein; hypothetical protein	complement(38088..38387)	Mycobacterium ulcerans Agy99	4552170
YP_904285.1	CDS	MUL_0039	NC_008611.1	38384	39301	R	N-term truncated by frame-shift mutation; cytoplasmic protein; hypothetical protein	complement(38384..39301)	Mycobacterium ulcerans Agy99	4552171
YP_904286.1	CDS	whiB5	NC_008611.1	39468	39884	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein (Whib-like), WhiB5	complement(39468..39884)	Mycobacterium ulcerans Agy99	4552172
YP_904287.1	CDS	MUL_0041	NC_008611.1	40027	40818	D	cytoplasmic protein; maybe involved in transcriptional mechanism.; transcriptional regulatory protein	40027..40818	Mycobacterium ulcerans Agy99	4552173
YP_904288.1	CDS	MUL_0042	NC_008611.1	40815	41642	D	secreted protein; function unknown. the P60 protein is a major extracellular protein may be involved in the invasion of host cells.; secreted protein P60-related protein	40815..41642	Mycobacterium ulcerans Agy99	4552174
YP_904289.1	CDS	MUL_0043	NC_008611.1	41639	42019	D	cytoplasmic protein; hypothetical protein	41639..42019	Mycobacterium ulcerans Agy99	4552175
YP_904290.1	CDS	MUL_0044	NC_008611.1	42094	43359	D	cytoplasmic protein; hypothetical protein	42094..43359	Mycobacterium ulcerans Agy99	4552176
YP_904291.1	CDS	MUL_0045	NC_008611.1	43402	43719	D	cytoplasmic protein; hypothetical protein	43402..43719	Mycobacterium ulcerans Agy99	4552177
YP_904292.1	CDS	MUL_0046	NC_008611.1	43716	44120	D	cytoplasmic protein; hypothetical protein	43716..44120	Mycobacterium ulcerans Agy99	4552178
YP_904293.1	CDS	MUL_0047	NC_008611.1	44248	45354	D	hypothetical protein	44248..45354	Mycobacterium ulcerans Agy99	4552179
YP_904294.1	CDS	MUL_0048	NC_008611.1	45442	45762	D	cytoplasmic protein; hypothetical protein	45442..45762	Mycobacterium ulcerans Agy99	4552180
YP_904295.1	CDS	MUL_0049	NC_008611.1	45887	46069	D	secreted protein; hypothetical protein	45887..46069	Mycobacterium ulcerans Agy99	4552181
YP_904296.1	CDS	MUL_0050	NC_008611.1	46161	46934	R	cytoplasmic protein; hypothetical protein	complement(46161..46934)	Mycobacterium ulcerans Agy99	4552182
YP_904297.1	CDS	MUL_0051	NC_008611.1	46937	48229	R	membrane protein; integral membrane protein	complement(46937..48229)	Mycobacterium ulcerans Agy99	4552183
YP_904298.1	CDS	MUL_0052	NC_008611.1	48389	48994	D	cytoplasmic protein; hypothetical protein	48389..48994	Mycobacterium ulcerans Agy99	4550136
YP_904299.1	CDS	MUL_0053	NC_008611.1	48981	49976	R	membrane protein; hypothetical protein	complement(48981..49976)	Mycobacterium ulcerans Agy99	4550137
YP_904300.1	CDS	MUL_0054	NC_008611.1	50029	50379	R	membrane protein; hypothetical protein	complement(50029..50379)	Mycobacterium ulcerans Agy99	4550138
YP_904301.1	CDS	mtc28	NC_008611.1	50464	51597	R	secreted protein; secreted proline rich protein Mtc28	complement(50464..51597)	Mycobacterium ulcerans Agy99	4550139
YP_904302.1	CDS	leuS	NC_008611.1	51796	54726	D	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase	51796..54726	Mycobacterium ulcerans Agy99	4550140
YP_904303.1	CDS	MUL_0057	NC_008611.1	54756	55421	R	membrane protein; function unknown, possibly involved in cellular metabolism.; short chain dehydrogenase	complement(54756..55421)	Mycobacterium ulcerans Agy99	4550141
YP_904304.1	CDS	MUL_0058	NC_008611.1	55462	55965	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; possibly involved in transcriptional mechanism.; transcriptional regulatory protein	complement(55462..55965)	Mycobacterium ulcerans Agy99	4550142
YP_904305.1	CDS	MUL_0061	NC_008611.1	58626	59390	R	cytoplasmic protein; involved in transcriptional mechanism.; GntR family transcriptional regulator	complement(58626..59390)	Mycobacterium ulcerans Agy99	4550145
YP_904306.1	CDS	MUL_0062	NC_008611.1	59501	60298	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(59501..60298)	Mycobacterium ulcerans Agy99	4550146
YP_904307.1	CDS	MUL_0063	NC_008611.1	60330	61241	R	cytoplasmic protein; function unknown, probably involved in lipid biosynthesis.; hydrolase	complement(60330..61241)	Mycobacterium ulcerans Agy99	4550147
YP_904308.1	CDS	ino1	NC_008611.1	61287	62405	R	involved in phosphatidylinositol (pi) biosynthetic pathway [catalytic activity: d-glucose 6-phosphate = 1L- myo-inositol 1-phosphate]; myo-inositol-1-phosphate synthase Ino1	complement(61287..62405)	Mycobacterium ulcerans Agy99	4550148
YP_904309.1	CDS	MUL_0065	NC_008611.1	62467	63009	R	cytoplasmic protein; hypothetical protein	complement(62467..63009)	Mycobacterium ulcerans Agy99	4550149
YP_904310.1	CDS	MUL_0066	NC_008611.1	63165	64034	R	membrane protein; hypothetical protein	complement(63165..64034)	Mycobacterium ulcerans Agy99	4550150
YP_904311.1	CDS	MUL_0067	NC_008611.1	64147	64581	D	cytoplasmic protein; hypothetical protein	64147..64581	Mycobacterium ulcerans Agy99	4550151
YP_904312.1	CDS	ponA1	NC_008611.1	65069	67111	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in peptidoglycan synthesis (at the final stages), cell wall formation. synthesis of cross-linked peptidoglycan from the lipid intermediates. the enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits); bifunctional penicillin-binding protein 1A/1B PonA1	65069..67111	Mycobacterium ulcerans Agy99	4550152
YP_904313.1	CDS	MUL_0069	NC_008611.1	67108	68748	D	membrane protein; hypothetical protein	67108..68748	Mycobacterium ulcerans Agy99	4550153
YP_904314.1	CDS	MUL_0070	NC_008611.1	68748	69386	D	cytoplasmic protein; transcriptional regulatory protein	68748..69386	Mycobacterium ulcerans Agy99	4550154
YP_904315.1	CDS	rpsF	NC_008611.1	69510	69800	D	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6	69510..69800	Mycobacterium ulcerans Agy99	4551749
YP_904316.1	CDS	ssb	NC_008611.1	69892	70407	D	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein	69892..70407	Mycobacterium ulcerans Agy99	4551750
YP_904317.1	CDS	rpsR	NC_008611.1	70453	70707	D	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18	70453..70707	Mycobacterium ulcerans Agy99	4551751
YP_904318.1	CDS	rplI	NC_008611.1	70754	71212	D	in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9	70754..71212	Mycobacterium ulcerans Agy99	4551752
YP_904319.1	CDS	dnaB	NC_008611.1	71743	73125	D	cytoplasmic protein; participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. the intein is an endonuclease (potential); replicative DNA helicase DnaB	71743..73125	Mycobacterium ulcerans Agy99	4551753
YP_904320.1	CDS	MUL_0076	NC_008611.1	73690	74349	D	cytoplasmic protein; hypothetical protein	73690..74349	Mycobacterium ulcerans Agy99	4551754
YP_904321.1	CDS	MUL_0077	NC_008611.1	74478	75104	R	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; hydrolase	complement(74478..75104)	Mycobacterium ulcerans Agy99	4551755
YP_904322.1	CDS	MUL_0080	NC_008611.1	77264	77878	R	cytoplasmic protein; transcriptional regulator	complement(77264..77878)	Mycobacterium ulcerans Agy99	4551757
YP_904323.1	CDS	MUL_0081	NC_008611.1	77913	78218	D	cytoplasmic protein; hypothetical protein	77913..78218	Mycobacterium ulcerans Agy99	4551758
YP_904324.1	CDS	MUL_0084	NC_008611.1	80415	80999	D	cytoplasmic protein; hypothetical protein	80415..80999	Mycobacterium ulcerans Agy99	4551761
YP_904325.1	CDS	MUL_0086	NC_008611.1	82839	83144	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulator	82839..83144	Mycobacterium ulcerans Agy99	4551763
YP_904326.1	CDS	MUL_0087	NC_008611.1	83141	83557	D	cytoplasmic protein; hypothetical protein	83141..83557	Mycobacterium ulcerans Agy99	4551764
YP_904327.1	CDS	MUL_0089	NC_008611.1	85879	87126	D	cytoplasmic protein; hypothetical protein	85879..87126	Mycobacterium ulcerans Agy99	4549582
YP_904328.1	CDS	rfbD	NC_008611.1	87171	88127	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; may form an ATP-driven O-antigen/lipopolysaccharide export apparatus, in association with RfbE. responsible for the translocation of the substrate across the membrane.; O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD	complement(87171..88127)	Mycobacterium ulcerans Agy99	4549583
YP_904329.1	CDS	MUL_0091	NC_008611.1	87998	88972	R	membrane protein; possibly involved in rhamnose biosynthesis; L-rhamnosyltransferase	complement(87998..88972)	Mycobacterium ulcerans Agy99	4549584
YP_904330.1	CDS	rfbE	NC_008611.1	88920	89762	R	membrane protein; may form an ATP-driven O-antigen/lipopolysaccharide export apparatus, in association with RfbD. responsible for energy coupling to the transport system.; O-antigen/lipopolysaccharide transport ATP- binding protein ABC transporter RfbE	complement(88920..89762)	Mycobacterium ulcerans Agy99	4549585
YP_904331.1	CDS	MUL_0093	NC_008611.1	89766	90299	R	cytoplasmic protein; hypothetical protein	complement(89766..90299)	Mycobacterium ulcerans Agy99	4549586
YP_904332.1	CDS	MUL_0094	NC_008611.1	90312	92285	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	complement(90312..92285)	Mycobacterium ulcerans Agy99	4549587
YP_904333.1	CDS	MUL_0095	NC_008611.1	92416	93612	D	membrane protein; function unknown, probably involved in cellular metabolism.; aminotransferase	92416..93612	Mycobacterium ulcerans Agy99	4549588
YP_904334.1	CDS	MUL_0096	NC_008611.1	93652	94644	R	membrane protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(93652..94644)	Mycobacterium ulcerans Agy99	4549589
YP_904335.1	CDS	MUL_0098	NC_008611.1	95273	96187	D	PPE62; membrane protein; PPE family protein	95273..96187	Mycobacterium ulcerans Agy99	4549591
YP_904336.1	CDS	MUL_0099	NC_008611.1	96405	97451	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	96405..97451	Mycobacterium ulcerans Agy99	4549592
YP_904337.1	CDS	MUL_0101	NC_008611.1	98998	100044	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	98998..100044	Mycobacterium ulcerans Agy99	4551431
YP_904338.1	CDS	fba	NC_008611.1	101494	102528	R	catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase	complement(101494..102528)	Mycobacterium ulcerans Agy99	4551433
YP_904339.1	CDS	MUL_0104	NC_008611.1	102629	103321	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	102629..103321	Mycobacterium ulcerans Agy99	4551434
YP_904340.1	CDS	MUL_0105	NC_008611.1	103310	104449	R	cytoplasmic protein; glycosyl hydrolase	complement(103310..104449)	Mycobacterium ulcerans Agy99	4551435
YP_904341.1	CDS	eutC	NC_008611.1	109181	109954	D	catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit	109181..109954	Mycobacterium ulcerans Agy99	4551439
YP_904342.1	CDS	MUL_0110	NC_008611.1	109957	111162	R	membrane protein; von Willebrand factor type A domain-containing protein	complement(109957..111162)	Mycobacterium ulcerans Agy99	4551440
YP_904343.1	CDS	MUL_0111	NC_008611.1	111169	111843	R	Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; function unknown, probably involved in cellular metabolism.; membrane oxidoreductase	complement(111169..111843)	Mycobacterium ulcerans Agy99	4551441
YP_904344.1	CDS	MUL_0112	NC_008611.1	111857	112735	R	membrane protein; function unknown, probably involved in cellular metabolism.; membrane oxidoreductase	complement(111857..112735)	Mycobacterium ulcerans Agy99	4551442
YP_904345.1	CDS	MUL_0113	NC_008611.1	112736	113326	R	cytoplasmic protein; hypothetical protein	complement(112736..113326)	Mycobacterium ulcerans Agy99	4551443
YP_904346.1	CDS	MUL_0114	NC_008611.1	113433	114212	R	membrane protein; hypothetical protein	complement(113433..114212)	Mycobacterium ulcerans Agy99	4551444
YP_904347.1	CDS	coxL	NC_008611.1	114216	116606	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism [catalytic activity: CO + H(2)O + acceptor = CO(2) + reduced acceptor]; carbon monoxyde dehydrogenase large chain CoxL	complement(114216..116606)	Mycobacterium ulcerans Agy99	4551445
YP_904348.1	CDS	coxS	NC_008611.1	116603	117082	R	cytoplasmic protein; probably involved in cellular metabolism [catalytic activity: CO + H(2)O + acceptor = CO(2) + reduced acceptor]; carbon monoxyde dehydrogenase small chain CoxS	complement(116603..117082)	Mycobacterium ulcerans Agy99	4551446
YP_904349.1	CDS	MUL_0119	NC_008611.1	119275	120207	D	cytoplasmic protein; possibly involved in transcriptional mechanism.; LysR family transcriptional regulator	119275..120207	Mycobacterium ulcerans Agy99	4551449
YP_904350.1	CDS	secE2	NC_008611.1	120225	120440	D	secreted protein; thought to be involved in protein transport (export); protein transport protein SecE2	120225..120440	Mycobacterium ulcerans Agy99	4552843
YP_904351.1	CDS	MUL_0121	NC_008611.1	120549	121205	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; possibly causes methylation of RNA.; RNA methyltransferase	complement(120549..121205)	Mycobacterium ulcerans Agy99	4552844
YP_904352.1	CDS	MUL_0122	NC_008611.1	121190	122083	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(121190..122083)	Mycobacterium ulcerans Agy99	4552845
YP_904353.1	CDS	pyrE	NC_008611.1	122095	122634	R	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase	complement(122095..122634)	Mycobacterium ulcerans Agy99	4552846
YP_904354.1	CDS	MUL_0124	NC_008611.1	122621	123394	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, but possibly involvement in lipid metabolism.; ketoacyl reductase	complement(122621..123394)	Mycobacterium ulcerans Agy99	4552847
YP_904355.1	CDS	MUL_0125	NC_008611.1	123439	124293	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(123439..124293)	Mycobacterium ulcerans Agy99	4552848
YP_904356.1	CDS	echA8_1	NC_008611.1	124651	125481	D	cytoplasmic protein; oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA8	124651..125481	Mycobacterium ulcerans Agy99	4552849
YP_904357.1	CDS	clpB	NC_008611.1	125478	128024	R	Detected in the cytoplasmic fraction by LCMSMS. Also detected in the extracellular matrix and the membrane fraction by proteomics.; membrane protein; ATPase subunit of an intracellular ATP-dependent protease. in M. tuberculosis H37Rv it is regulated positively by SigH and negatively by HspR.; endopeptidase ATP binding protein (chain B) ClpB	complement(125478..128024)	Mycobacterium ulcerans Agy99	4552850
YP_904358.1	CDS	MUL_0128	NC_008611.1	128351	129532	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; monooxygenase	128351..129532	Mycobacterium ulcerans Agy99	4552851
YP_904359.1	CDS	MUL_0129	NC_008611.1	129607	130497	D	cytoplasmic protein; possible carbohydrate transport and metabolism; hypothetical protein	129607..130497	Mycobacterium ulcerans Agy99	4552852
YP_904360.1	CDS	MUL_0130	NC_008611.1	130824	131870	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	130824..131870	Mycobacterium ulcerans Agy99	4552853
YP_904361.1	CDS	MUL_0131	NC_008611.1	132228	133562	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	132228..133562	Mycobacterium ulcerans Agy99	4552854
YP_904362.1	CDS	MUL_0132	NC_008611.1	133754	134947	R	cytoplasmic protein; required for the transposition of insertion element IS2404. ORF is extended by 50 aa.; transposase for IS2404	complement(133754..134947)	Mycobacterium ulcerans Agy99	4552855
YP_904363.1	CDS	MUL_0133	NC_008611.1	135369	135608	D	cytoplasmic protein; hypothetical protein	135369..135608	Mycobacterium ulcerans Agy99	4552856
YP_904364.1	CDS	MUL_0135	NC_008611.1	138020	139048	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	138020..139048	Mycobacterium ulcerans Agy99	4552858
YP_904365.1	CDS	MUL_0136	NC_008611.1	139396	140241	D	membrane protein; function unknown, possibly involved in cellular metabolism.; short-chain type dehydrogenase/reductase	139396..140241	Mycobacterium ulcerans Agy99	4552859
YP_904366.1	CDS	MUL_0137	NC_008611.1	140258	140908	D	membrane protein; function unknown, contains NADH-flavin reductase domain; hypothetical protein	140258..140908	Mycobacterium ulcerans Agy99	4552860
YP_904367.1	CDS	metE	NC_008611.1	141241	143616	D	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase	141241..143616	Mycobacterium ulcerans Agy99	4552861
YP_904368.1	CDS	MUL_0139	NC_008611.1	143694	145415	R	membrane protein; hypothetical protein	complement(143694..145415)	Mycobacterium ulcerans Agy99	4552862
YP_904369.1	CDS	MUL_0140	NC_008611.1	145487	145996	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(145487..145996)	Mycobacterium ulcerans Agy99	4552863
YP_904370.1	CDS	ppdK	NC_008611.1	146094	147734	D	catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase	146094..147734	Mycobacterium ulcerans Agy99	4552864
YP_904371.1	CDS	MUL_0142	NC_008611.1	147731	148336	D	cytoplasmic protein; hypothetical protein	147731..148336	Mycobacterium ulcerans Agy99	4552865
YP_904372.1	CDS	ephC	NC_008611.1	149589	150515	R	cytoplasmic protein; thought to be involved in detoxification reactions following oxidative damage to lipids [catalytic activity: an epoxide + H(2)O = a glycol]; epoxide hydrolase EphC	complement(149589..150515)	Mycobacterium ulcerans Agy99	4552867
YP_904373.1	CDS	MUL_0145	NC_008611.1	151048	151551	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	151048..151551	Mycobacterium ulcerans Agy99	4552868
YP_904374.1	CDS	MUL_0146	NC_008611.1	151637	152113	R	cytoplasmic protein; hypothetical protein	complement(151637..152113)	Mycobacterium ulcerans Agy99	4552869
YP_904375.1	CDS	bpoB	NC_008611.1	152240	153115	D	cytoplasmic protein; supposed involved in detoxification reactions.; peroxidase BpoB	152240..153115	Mycobacterium ulcerans Agy99	4552870
YP_904376.2	CDS	gnd2	NC_008611.1	153112	154134	R	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase	complement(153112..154134)	Mycobacterium ulcerans Agy99	4552871
YP_904377.1	CDS	zwf1	NC_008611.1	154149	155165	R	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase	complement(154149..155165)	Mycobacterium ulcerans Agy99	4552872
YP_904378.1	CDS	MUL_0150	NC_008611.1	155832	156539	D	cytoplasmic protein; hypothetical protein	155832..156539	Mycobacterium ulcerans Agy99	4552873
YP_904379.1	CDS	MUL_0151	NC_008611.1	156572	156751	D	cytoplasmic protein; hypothetical protein	156572..156751	Mycobacterium ulcerans Agy99	4552874
YP_904380.1	CDS	MUL_5079	NC_008611.1	156733	157434	D	cytoplasmic protein; hypothetical protein	156733..157434	Mycobacterium ulcerans Agy99	4552875
YP_904381.1	CDS	MUL_0152	NC_008611.1	157531	157860	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; hypothetical protein	complement(157531..157860)	Mycobacterium ulcerans Agy99	4552876
YP_904382.1	CDS	MUL_0153	NC_008611.1	157936	158232	R	cytoplasmic protein; hypothetical protein	complement(157936..158232)	Mycobacterium ulcerans Agy99	4552877
YP_904383.1	CDS	MUL_0155	NC_008611.1	158704	160224	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; dioxygenase	158704..160224	Mycobacterium ulcerans Agy99	4552676
YP_904384.1	CDS	MUL_0156	NC_008611.1	160169	160714	D	cytoplasmic protein; hypothetical protein	160169..160714	Mycobacterium ulcerans Agy99	4552677
YP_904385.1	CDS	MUL_0157	NC_008611.1	160720	161154	R	membrane protein; hypothetical protein	complement(160720..161154)	Mycobacterium ulcerans Agy99	4552678
YP_904386.1	CDS	MUL_0158	NC_008611.1	161225	161998	R	hypothetical protein	complement(161225..161998)	Mycobacterium ulcerans Agy99	4552679
YP_904387.1	CDS	MUL_0160	NC_008611.1	163531	163977	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(163531..163977)	Mycobacterium ulcerans Agy99	4552681
YP_904388.1	CDS	MUL_0161	NC_008611.1	163982	164170	R	cytoplasmic protein; hypothetical protein	complement(163982..164170)	Mycobacterium ulcerans Agy99	4552682
YP_904389.1	CDS	MUL_0163	NC_008611.1	165556	166890	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	165556..166890	Mycobacterium ulcerans Agy99	4552684
YP_904390.1	CDS	MUL_0165	NC_008611.1	167198	168244	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(167198..168244)	Mycobacterium ulcerans Agy99	4552686
YP_904391.1	CDS	MUL_0166	NC_008611.1	168649	169749	R	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD	complement(168649..169749)	Mycobacterium ulcerans Agy99	4552687
YP_904392.1	CDS	MUL_0167	NC_008611.1	169882	171102	D	membrane protein; hypothetical protein	169882..171102	Mycobacterium ulcerans Agy99	4552688
YP_904393.1	CDS	ispH	NC_008611.1	171116	172114	R	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	complement(171116..172114)	Mycobacterium ulcerans Agy99	4552689
YP_904394.1	CDS	MUL_0169	NC_008611.1	172224	172841	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; hypothetical protein	172224..172841	Mycobacterium ulcerans Agy99	4552690
YP_904395.1	CDS	xseA	NC_008611.1	172838	174085	D	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit	172838..174085	Mycobacterium ulcerans Agy99	4552691
YP_904396.1	CDS	xseB	NC_008611.1	174069	174323	D	catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit	174069..174323	Mycobacterium ulcerans Agy99	4553964
YP_904397.1	CDS	MUL_0172	NC_008611.1	174378	175472	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; cholesterol dehydrogenase	174378..175472	Mycobacterium ulcerans Agy99	4553965
YP_904398.1	CDS	MUL_0173	NC_008611.1	175647	175910	D	cytoplasmic protein; hypothetical protein	175647..175910	Mycobacterium ulcerans Agy99	4553966
YP_904399.1	CDS	MUL_0174	NC_008611.1	176005	176271	R	cytoplasmic protein; hypothetical protein	complement(176005..176271)	Mycobacterium ulcerans Agy99	4553967
YP_904400.1	CDS	MUL_0175	NC_008611.1	176368	177414	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(176368..177414)	Mycobacterium ulcerans Agy99	4553968
YP_904401.1	CDS	MUL_0177	NC_008611.1	179542	180699	D	membrane protein; hypothetical protein	179542..180699	Mycobacterium ulcerans Agy99	4553970
YP_904402.1	CDS	MUL_0178	NC_008611.1	180677	181477	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(180677..181477)	Mycobacterium ulcerans Agy99	4553971
YP_904403.1	CDS	MUL_0179	NC_008611.1	181505	182215	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(181505..182215)	Mycobacterium ulcerans Agy99	4553972
YP_904404.1	CDS	glpX	NC_008611.1	182221	183309	D	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II	182221..183309	Mycobacterium ulcerans Agy99	4553973
YP_904405.1	CDS	fumC	NC_008611.1	183347	184777	D	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase	183347..184777	Mycobacterium ulcerans Agy99	4553974
YP_904406.1	CDS	MUL_0182	NC_008611.1	184874	185854	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; membrane glycine and proline rich protein	184874..185854	Mycobacterium ulcerans Agy99	4553975
YP_904407.1	CDS	MUL_0184	NC_008611.1	187386	188261	R	membrane protein; probably involved in carbohydrate degradation. may hydrolyse the glycosidic bond between two or more carbohydrates or between a carbohydrate and a non- carbohydrate moiety.; glycosyl hydrolase	complement(187386..188261)	Mycobacterium ulcerans Agy99	4553977
YP_904408.1	CDS	MUL_0186	NC_008611.1	189626	189829	R	hypothetical protein	complement(189626..189829)	Mycobacterium ulcerans Agy99	4553979
YP_904409.1	CDS	desA2	NC_008611.1	189944	190771	R	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; thought to catalyze the principal conversion of saturated fatty acids to unsaturated fatty acids. thought to convert stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons delta-9 and delta-10 of the acyl chain [catalytic activity: stearoyl-[acyl-carrier protein] + AH2 + O2 = oleoyl-[acyl-carrier protein] + a + 2 H2O]; acyl-[acyl-carrier protein] desaturase DesA2	complement(189944..190771)	Mycobacterium ulcerans Agy99	4553980
YP_904410.1	CDS	glyA	NC_008611.1	190828	192108	R	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase	complement(190828..192108)	Mycobacterium ulcerans Agy99	4553981
YP_904411.1	CDS	coaA	NC_008611.1	192270	193208	D	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase	192270..193208	Mycobacterium ulcerans Agy99	4551412
YP_904412.1	CDS	MUL_0190	NC_008611.1	193472	194452	R	PE_PGRS20; membrane protein; PE-PGRS family protein	complement(193472..194452)	Mycobacterium ulcerans Agy99	4551413
YP_904413.1	CDS	MUL_0191	NC_008611.1	194658	195176	R	membrane protein; hypothetical protein	complement(194658..195176)	Mycobacterium ulcerans Agy99	4551414
YP_904414.1	CDS	MUL_0192	NC_008611.1	195261	196628	R	membrane protein; hypothetical protein	complement(195261..196628)	Mycobacterium ulcerans Agy99	4551415
YP_904415.1	CDS	uppS	NC_008611.1	196867	197682	R	cytoplasmic protein; catalyzes the first committed step in the synthesis of decaprenyl diphosphate, a molecule which has a central role in the biosynthesis of most features of the mycobacterial cell wall. adds one isoprene unit to omega,E- geranyl diphosphate. in mycobacterium; short (C15) chain Z-isoprenyl diphosphate synthase, UppS	complement(196867..197682)	Mycobacterium ulcerans Agy99	4551416
YP_904416.1	CDS	MUL_0194	NC_008611.1	197802	198542	D	potential role involved in virulence; membrane protein; hemolysin-like protein	197802..198542	Mycobacterium ulcerans Agy99	4551417
YP_904417.1	CDS	MUL_0195	NC_008611.1	198567	198950	R	cytoplasmic protein; hypothetical protein	complement(198567..198950)	Mycobacterium ulcerans Agy99	4551418
YP_904418.1	CDS	MUL_0196	NC_008611.1	198964	200988	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; transmembrane protein	complement(198964..200988)	Mycobacterium ulcerans Agy99	4551419
YP_904419.1	CDS	MUL_0197	NC_008611.1	200975	201274	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(200975..201274)	Mycobacterium ulcerans Agy99	4551420
YP_904420.1	CDS	mca	NC_008611.1	201271	202143	R	cytoplasmic protein; mycothiol-dependent detoxification enzyme, involved in mycothiol biosynthesis.; mycothiol conjugate amidase Mca	complement(201271..202143)	Mycobacterium ulcerans Agy99	4551421
YP_904421.1	CDS	MUL_0199	NC_008611.1	202285	202719	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	202285..202719	Mycobacterium ulcerans Agy99	4551422
YP_904422.1	CDS	greA	NC_008611.1	202951	203445	D	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA	202951..203445	Mycobacterium ulcerans Agy99	4551423
YP_904423.1	CDS	metB	NC_008611.1	203528	204694	R	catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase	complement(203528..204694)	Mycobacterium ulcerans Agy99	4551424
YP_904424.1	CDS	pra	NC_008611.1	204794	205552	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; proline-rich antigen Pra-like protein	complement(204794..205552)	Mycobacterium ulcerans Agy99	4551425
YP_904425.1	CDS	cbs	NC_008611.1	205748	207142	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; thought to be involved in homocysteine transulfuration [catalytic activity: L-serine + L- homocysteine = cystathionine + H2O]; cystathionine beta-synthase	complement(205748..207142)	Mycobacterium ulcerans Agy99	4551426
YP_904426.1	CDS	lipU	NC_008611.1	207201	208079	R	Detected in the cytoplasmic fraction by proteomics.; cytoplasmic protein; hydrolyses lipids; lipase LipU	complement(207201..208079)	Mycobacterium ulcerans Agy99	4551427
YP_904427.1	CDS	MUL_0206	NC_008611.1	208533	209477	D	secreted protein; hypothetical protein	208533..209477	Mycobacterium ulcerans Agy99	4551428
YP_904428.1	CDS	fadA3	NC_008611.1	209587	210804	D	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	209587..210804	Mycobacterium ulcerans Agy99	4551429
YP_904429.1	CDS	MUL_0208	NC_008611.1	210985	211827	R	membrane protein; hypothetical protein	complement(210985..211827)	Mycobacterium ulcerans Agy99	4551430
YP_904430.1	CDS	echA9	NC_008611.1	212075	213112	D	catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase	212075..213112	Mycobacterium ulcerans Agy99	4553912
YP_904431.1	CDS	echA8	NC_008611.1	213124	213897	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	213124..213897	Mycobacterium ulcerans Agy99	4553913
YP_904432.1	CDS	MUL_0211	NC_008611.1	213909	215705	D	membrane protein; hypothetical protein	213909..215705	Mycobacterium ulcerans Agy99	4553914
YP_904433.1	CDS	MUL_0212	NC_008611.1	215905	217815	D	PE_PGRS9_3; membrane protein; PE-PGRS family protein	215905..217815	Mycobacterium ulcerans Agy99	4553915
YP_904434.1	CDS	MUL_0214	NC_008611.1	219507	220553	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	219507..220553	Mycobacterium ulcerans Agy99	4553917
YP_904435.1	CDS	MUL_0215	NC_008611.1	221430	221813	R	cytoplasmic protein; hypothetical protein	complement(221430..221813)	Mycobacterium ulcerans Agy99	4553918
YP_904436.1	CDS	MUL_0216	NC_008611.1	221813	222388	R	cytoplasmic protein; hypothetical protein	complement(221813..222388)	Mycobacterium ulcerans Agy99	4553919
YP_904437.1	CDS	lpqV	NC_008611.1	222531	222998	D	membrane protein; lipoprotein LpqV	222531..222998	Mycobacterium ulcerans Agy99	4553920
YP_904438.1	CDS	MUL_0218	NC_008611.1	223101	224165	D	cytoplasmic protein; hypothetical protein	223101..224165	Mycobacterium ulcerans Agy99	4553921
YP_904439.1	CDS	MUL_0220	NC_008611.1	225057	225935	R	cytoplasmic protein; hypothetical protein	complement(225057..225935)	Mycobacterium ulcerans Agy99	4553923
YP_904440.1	CDS	MUL_0221	NC_008611.1	225968	226441	R	membrane protein; hypothetical protein	complement(225968..226441)	Mycobacterium ulcerans Agy99	4553924
YP_904441.1	CDS	MUL_0223	NC_008611.1	228677	229381	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	228677..229381	Mycobacterium ulcerans Agy99	4553926
YP_904442.1	CDS	MUL_0224	NC_008611.1	229406	229723	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	229406..229723	Mycobacterium ulcerans Agy99	4549632
YP_904443.1	CDS	MUL_0225	NC_008611.1	229777	230658	R	Detected in the membrane fraction by 2D-LC-MS/MS.; cytoplasmic protein; hypothetical protein	complement(229777..230658)	Mycobacterium ulcerans Agy99	4549633
YP_904444.1	CDS	MUL_0226	NC_008611.1	230651	231547	R	cytoplasmic protein; acid phosphatase	complement(230651..231547)	Mycobacterium ulcerans Agy99	4549634
YP_904445.1	CDS	aslA	NC_008611.1	231548	233098	R	cytoplasmic protein; thought to play an important role in the mineralization of sulfates [catalytic activity: a phenol sulfate + H2O = a phenol + sulfate]; arylsulfatase, AslA	complement(231548..233098)	Mycobacterium ulcerans Agy99	4549635
YP_904446.1	CDS	fadD14	NC_008611.1	234378	236009	R	activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase	complement(234378..236009)	Mycobacterium ulcerans Agy99	4549637
YP_904447.1	CDS	MUL_0230	NC_008611.1	236131	237330	R	hypothetical protein	complement(236131..237330)	Mycobacterium ulcerans Agy99	4549638
YP_904448.1	CDS	MUL_0232	NC_008611.1	237857	238903	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(237857..238903)	Mycobacterium ulcerans Agy99	4549640
YP_904449.1	CDS	ctpE	NC_008611.1	239476	241851	R	membrane protein; metal cation-transporting ATPase; possibly catalyzes the transport of undeterminated metal cation with hydrolyse of ATP [catalytic activity: ATP + H(2)O + undeterminated metal cation(in) = ADP + phosphate + undeterminated metal cation(out)]; metal cation transporter ATPase p-type CtpE	complement(239476..241851)	Mycobacterium ulcerans Agy99	4549641
YP_904450.1	CDS	MUL_0235	NC_008611.1	243670	244788	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(243670..244788)	Mycobacterium ulcerans Agy99	4549643
YP_904451.1	CDS	echA6	NC_008611.1	244795	245526	R	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(244795..245526)	Mycobacterium ulcerans Agy99	4549644
YP_904452.1	CDS	accD3	NC_008611.1	245553	247034	D	membrane protein; this protein is a component of the acetyl coenzyme a carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [catalytic activity ATP + acetyl-CoA + HCO(3)(- ) = ADP + phosphate + malonyl-CoA]; acetyl-coenzyme a carboxylase carboxyl transferase (subunit beta) AccD3	245553..247034	Mycobacterium ulcerans Agy99	4549645
YP_904453.1	CDS	MUL_0240	NC_008611.1	248092	249591	D	C-term truncated 20aa.; membrane protein; function unknown, but maybe involved in efflux system (probably sugar or drug transport); hypothetical protein	248092..249591	Mycobacterium ulcerans Agy99	4549646
YP_904454.1	CDS	bioF2_1	NC_008611.1	249613	250875	D	cytoplasmic protein; could be involved in biotin biosynthesis (at the first step) [catalytic activity: 6-carboxyhexanoyl-CoA + L- alanine = 8-amino-7-oxononanoate + CoA + CO2]; 8-amino-7-oxononanoate synthase	249613..250875	Mycobacterium ulcerans Agy99	4549647
YP_904455.1	CDS	cysM	NC_008611.1	251051	251995	D	cytoplasmic protein; involved in cysteine biosynthesis [catalytic activity : O3-acetyl-L-serine + H(2)S = L-cysteine + acetate]; cysteine synthase B	251051..251995	Mycobacterium ulcerans Agy99	4549648
YP_904456.1	CDS	MUL_0245	NC_008611.1	253251	253772	R	cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein	complement(253251..253772)	Mycobacterium ulcerans Agy99	4549937
YP_904457.1	CDS	MUL_0247	NC_008611.1	254272	255651	D	cytoplasmic protein; hypothetical protein	254272..255651	Mycobacterium ulcerans Agy99	4549938
YP_904458.1	CDS	prrA	NC_008611.1	255802	256512	D	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); membrane protein; transcriptional regulator part of the two component regulatory system PrrA/PrrB. thought to be involved in the environmental adaptation , specifically in an early phase of the intracellular growth.; two component response transcriptional regulatory protein PrrA	255802..256512	Mycobacterium ulcerans Agy99	4549939
YP_904459.1	CDS	prrB	NC_008611.1	256527	257867	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; sensor part of the two component regulatory system PrrA/PrrB. thought to be involved in the environmental adaptation , specifically in an early phase of the intracellular growth.; two component sensor histidine kinase PrrB	256527..257867	Mycobacterium ulcerans Agy99	4549940
YP_904460.1	CDS	MUL_0251	NC_008611.1	258526	258759	R	membrane protein; hypothetical protein	complement(258526..258759)	Mycobacterium ulcerans Agy99	4549942
YP_904461.1	CDS	ompA	NC_008611.1	258772	259770	R	membrane protein; the protein behaved as a porin of low specific activity. structural protein that may protect the integrity of the bacterium.; outer membrane protein OmpA	complement(258772..259770)	Mycobacterium ulcerans Agy99	4549943
YP_904462.1	CDS	MUL_0253	NC_008611.1	259883	260146	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	259883..260146	Mycobacterium ulcerans Agy99	4549944
YP_904463.1	CDS	MUL_0254	NC_008611.1	260170	261744	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	260170..261744	Mycobacterium ulcerans Agy99	4549945
YP_904464.1	CDS	gltA	NC_008611.1	261749	263044	R	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase	complement(261749..263044)	Mycobacterium ulcerans Agy99	4549946
YP_904465.1	CDS	MUL_0256	NC_008611.1	263432	264901	R	Also detected in the cytoplamic fraction by LCMSMS; membrane protein; function unknown, probably involved in cellular metabolism.; monooxygenase	complement(263432..264901)	Mycobacterium ulcerans Agy99	4549947
YP_904466.1	CDS	pdxH	NC_008611.1	265165	265653	R	cytoplasmic protein; involved in biosynthesis of pyridoxine (vitamin B6) and pyridoxal phosphate. oxidize Pnp and PMP into pyridoxal 5'-phosphate (PLP)[catalytic activity: pyridoxamine 5'-phosphate + H(2)O + O(2) = pyridoxal 5'- phosphate + NH(3) + H(2)O(2)]; pyridoxamine 5'-phosphate oxidase PdxH	complement(265165..265653)	Mycobacterium ulcerans Agy99	4549948
YP_904467.1	CDS	citA	NC_008611.1	266751	267605	D	forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle; citrate synthase 2	266751..267605	Mycobacterium ulcerans Agy99	4549950
YP_904468.1	CDS	MUL_0261	NC_008611.1	268076	269122	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(268076..269122)	Mycobacterium ulcerans Agy99	4549952
YP_904469.1	CDS	MUL_0263	NC_008611.1	273137	273595	D	Detected in the cytoplasmic and secreted fractions by 2D-LC-MS/MS.; cytoplasmic protein; hypothetical protein	273137..273595	Mycobacterium ulcerans Agy99	4551600
YP_904470.1	CDS	fprB	NC_008611.1	273672	275357	R	cytoplasmic protein; serves as the first electron transfer protein in all the P450 systems [catalytic activity: reduced adrenodoxin + NADP+ = oxidized adrenodoxin + NADPH]; NADPH:adrenodoxin oxidoreductase FprB	complement(273672..275357)	Mycobacterium ulcerans Agy99	4551601
YP_904471.1	CDS	MUL_0265	NC_008611.1	275376	276401	R	cytoplasmic protein; hypothetical protein	complement(275376..276401)	Mycobacterium ulcerans Agy99	4551602
YP_904472.1	CDS	serC	NC_008611.1	276608	277738	D	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase	276608..277738	Mycobacterium ulcerans Agy99	4551603
YP_904473.1	CDS	MUL_0267	NC_008611.1	277860	278651	D	cytoplasmic protein; hypothetical protein	277860..278651	Mycobacterium ulcerans Agy99	4551604
YP_904474.1	CDS	MUL_0268	NC_008611.1	278648	278935	R	membrane protein; transmembrane protein	complement(278648..278935)	Mycobacterium ulcerans Agy99	4551605
YP_904475.1	CDS	MUL_0269	NC_008611.1	278932	279738	R	cytoplasmic protein; causes methylation.; rRNA methyltransferase	complement(278932..279738)	Mycobacterium ulcerans Agy99	4551606
YP_904476.1	CDS	MUL_0270	NC_008611.1	279768	280199	R	cytoplasmic protein; thought to be involved in transcriptional mechanism.; MarR family transcriptional regulator	complement(279768..280199)	Mycobacterium ulcerans Agy99	4551607
YP_904477.1	CDS	MUL_0271	NC_008611.1	280458	280739	D	membrane protein; transmembrane protein	280458..280739	Mycobacterium ulcerans Agy99	4551608
YP_904478.1	CDS	MUL_0272	NC_008611.1	280763	281218	D	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; hypothetical protein	280763..281218	Mycobacterium ulcerans Agy99	4551609
YP_904479.1	CDS	MUL_0273	NC_008611.1	281215	282018	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; hypothetical protein	complement(281215..282018)	Mycobacterium ulcerans Agy99	4551610
YP_904480.1	CDS	MUL_0274	NC_008611.1	282124	283833	D	membrane protein; transmembrane protein	282124..283833	Mycobacterium ulcerans Agy99	4551611
YP_904481.1	CDS	MUL_0275	NC_008611.1	283830	284318	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	283830..284318	Mycobacterium ulcerans Agy99	4551612
YP_904482.1	CDS	MUL_0276	NC_008611.1	284426	285280	D	cytoplasmic protein; hypothetical protein	284426..285280	Mycobacterium ulcerans Agy99	4551613
YP_904483.1	CDS	MUL_0277	NC_008611.1	285277	286188	R	cytoplasmic protein; hypothetical protein	complement(285277..286188)	Mycobacterium ulcerans Agy99	4551614
YP_904484.1	CDS	fadE10	NC_008611.1	286293	288245	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE10	complement(286293..288245)	Mycobacterium ulcerans Agy99	4551615
YP_904485.1	CDS	cspB	NC_008611.1	288432	288986	R	cytoplasmic protein; function unknown, thought to act in response to low temperature.; cold shock-like protein B CspB	complement(288432..288986)	Mycobacterium ulcerans Agy99	4551616
YP_904486.1	CDS	MUL_0280	NC_008611.1	289000	289404	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	289000..289404	Mycobacterium ulcerans Agy99	4551617
YP_904487.1	CDS	moaA	NC_008611.1	289401	290483	D	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A	289401..290483	Mycobacterium ulcerans Agy99	4551618
YP_904488.1	CDS	moaD2	NC_008611.1	290497	290790	D	cytoplasmic protein; involved in molybdenum cofactor biosynthesis.; molybdenum cofactor biosynthesis protein D 2 MoaD2	290497..290790	Mycobacterium ulcerans Agy99	4554350
YP_904489.1	CDS	rpfA	NC_008611.1	291203	292066	D	membrane protein; function unknown. may be promote the resuscitation and growth of dormant, nongrowing cell.; resuscitation-promoting factor RpfA	291203..292066	Mycobacterium ulcerans Agy99	4554351
YP_904490.1	CDS	moaE2	NC_008611.1	292111	292536	R	cytoplasmic protein; possibly a molybdenum biosynthesis cofactor. conversion of molybdopterin precursor Z into molybdopterin requires transfer of two sulfur atoms to precursor Z (to generate the dithiolene group) this is catalyzed by the converting factor composed of a small and large subunit.; molybdenum cofactor biosynthesis protein E2 MoaE2	complement(292111..292536)	Mycobacterium ulcerans Agy99	4554352
YP_904491.1	CDS	mog	NC_008611.1	292533	293018	R	cytoplasmic protein; involved in molybdopterin biosynthesis; involved in the biosynthesis of a demolybdo-cofactor (molybdopterin), necessary for molybdo-enzymes.; molybdopterin biosynthesis Mog protein	complement(292533..293018)	Mycobacterium ulcerans Agy99	4554353
YP_904492.1	CDS	moaC2	NC_008611.1	293015	293560	R	cytoplasmic protein; involved in the biosynthesis of molybdopterin.; molybdenum cofactor biosynthesis protein C 2 MoaC2	complement(293015..293560)	Mycobacterium ulcerans Agy99	4554354
YP_904493.1	CDS	MUL_0287	NC_008611.1	293564	293773	R	hypothetical protein	complement(293564..293773)	Mycobacterium ulcerans Agy99	4554355
YP_904494.1	CDS	MUL_0288	NC_008611.1	293836	296094	D	hypothetical protein	293836..296094	Mycobacterium ulcerans Agy99	4554356
YP_904495.1	CDS	ercc3	NC_008611.1	296198	297826	D	cytoplasmic protein; involved in nucleotide excision repair. has helicase activity: acts by opening DNA either around the RNA transcription start site or the DNA damage.; DNA helicase Ercc3	296198..297826	Mycobacterium ulcerans Agy99	4554357
YP_904496.1	CDS	MUL_0290	NC_008611.1	297938	298375	R	cytoplasmic protein; hypothetical protein	complement(297938..298375)	Mycobacterium ulcerans Agy99	4554358
YP_904497.1	CDS	MUL_0291	NC_008611.1	298676	298996	D	membrane protein; hypothetical protein	298676..298996	Mycobacterium ulcerans Agy99	4554359
YP_904498.1	CDS	MUL_0292	NC_008611.1	299024	299971	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; function unknown, may have reductase activity; hypothetical protein	complement(299024..299971)	Mycobacterium ulcerans Agy99	4554360
YP_904499.1	CDS	MUL_0293	NC_008611.1	300077	300616	R	cytoplasmic protein; transcriptional regulator	complement(300077..300616)	Mycobacterium ulcerans Agy99	4554361
YP_904500.1	CDS	MUL_0294	NC_008611.1	300693	301904	D	Also detected in the cytoplasmic fraction.; membrane protein; membrane-associated oxidoreductase	300693..301904	Mycobacterium ulcerans Agy99	4554362
YP_904501.1	CDS	fadB	NC_008611.1	301919	304063	R	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the extracellular matrix by proteomics.; membrane protein; involved in fatty acid degradation (probably in fatty acid beta-oxidation cycle); fatty oxidation protein FadB	complement(301919..304063)	Mycobacterium ulcerans Agy99	4554363
YP_904502.1	CDS	fadA	NC_008611.1	304068	305279	R	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	complement(304068..305279)	Mycobacterium ulcerans Agy99	4554364
YP_904503.1	CDS	MUL_0297	NC_008611.1	305484	306680	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; aminotransferase	305484..306680	Mycobacterium ulcerans Agy99	4554365
YP_904504.1	CDS	MUL_0299	NC_008611.1	307165	307620	R	cytoplasmic protein; hypothetical protein	complement(307165..307620)	Mycobacterium ulcerans Agy99	4554367
YP_904505.1	CDS	MUL_0301	NC_008611.1	308797	309237	R	cytoplasmic protein; conserved hypothetical protein; hypothetical protein	complement(308797..309237)	Mycobacterium ulcerans Agy99	4554369
YP_904506.1	CDS	pdc	NC_008611.1	309301	311001	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; possible indole-3-pyruvate decarboxylase; [catalytic activity: 3-(indol-3-YL) pyruvate = 2-(indol-3- YL)acetaldehyde + CO2], or possible pyruvate decarboxylase; [catalytic activity: a 2-oxo acid = an aldehyde + CO2]; pyruvate or indole-3-pyruvate decarboxylase Pdc	309301..311001	Mycobacterium ulcerans Agy99	4549594
YP_904507.1	CDS	MUL_0303	NC_008611.1	311016	311201	R	cytoplasmic protein; conserved hypothetical protein; hypothetical protein	complement(311016..311201)	Mycobacterium ulcerans Agy99	4549595
YP_904508.1	CDS	MUL_0305	NC_008611.1	311874	312467	R	membrane protein; hypothetical protein	complement(311874..312467)	Mycobacterium ulcerans Agy99	4549597
YP_904509.1	CDS	MUL_0306	NC_008611.1	312464	313366	R	membrane protein; hypothetical protein	complement(312464..313366)	Mycobacterium ulcerans Agy99	4549598
YP_904510.1	CDS	MUL_0308	NC_008611.1	315163	316344	R	cytoplasmic protein; function unknown, contains a hydrolytic domain.; hypothetical protein	complement(315163..316344)	Mycobacterium ulcerans Agy99	4549600
YP_904511.1	CDS	MUL_0309	NC_008611.1	316438	316860	R	membrane protein; lipoprotein	complement(316438..316860)	Mycobacterium ulcerans Agy99	4549601
YP_904512.1	CDS	echA8_2	NC_008611.1	317004	317768	D	cytoplasmic protein; oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA8_2	317004..317768	Mycobacterium ulcerans Agy99	4549602
YP_904513.1	CDS	MUL_0311	NC_008611.1	317765	318196	D	secreted protein; hypothetical protein	317765..318196	Mycobacterium ulcerans Agy99	4549603
YP_904514.1	CDS	MUL_0313	NC_008611.1	318774	319097	D	cytoplasmic protein; hypothetical protein	318774..319097	Mycobacterium ulcerans Agy99	4549606
YP_904515.1	CDS	cyp150A6	NC_008611.1	319116	320390	R	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 150A6 Cyp150A6	complement(319116..320390)	Mycobacterium ulcerans Agy99	4549607
YP_904516.1	CDS	fabG2	NC_008611.1	320674	321405	D	membrane protein; involved in the fatty acid biosynthesis [catalytic activity: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH]; 3-oxoacyl-ACP reductase	320674..321405	Mycobacterium ulcerans Agy99	4549608
YP_904517.1	CDS	MUL_0316	NC_008611.1	321514	321714	D	cytoplasmic protein; ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.; ferredoxin	321514..321714	Mycobacterium ulcerans Agy99	4549609
YP_904518.1	CDS	cyp188A3	NC_008611.1	321729	323141	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 188A3 Cyp188A3	321729..323141	Mycobacterium ulcerans Agy99	4549610
YP_904519.1	CDS	MUL_0319	NC_008611.1	324354	325394	R	cytoplasmic protein; function unknown, but supposed involvement in lipid degradation.; acyl-CoA dehydrogenase	complement(324354..325394)	Mycobacterium ulcerans Agy99	4549612
YP_904520.1	CDS	MUL_0320	NC_008611.1	325454	325954	D	cytoplasmic protein; hypothetical protein	325454..325954	Mycobacterium ulcerans Agy99	4552639
YP_904521.1	CDS	MUL_0321	NC_008611.1	326429	327964	R	membrane protein; function unknown, possibly involved in transport of sulfate across the membrane.; integral membrane transporter	complement(326429..327964)	Mycobacterium ulcerans Agy99	4552640
YP_904522.1	CDS	MUL_0322	NC_008611.1	328370	329452	R	cytoplasmic protein; function unknown, but supposed involvement in lipid degradation.; acyl-CoA dehydrogenase	complement(328370..329452)	Mycobacterium ulcerans Agy99	4552641
YP_904523.1	CDS	MUL_0323	NC_008611.1	329643	330296	D	cytoplasmic protein; could be involved in transcriptional mechanism.; transcriptional regulatory protein	329643..330296	Mycobacterium ulcerans Agy99	4552642
YP_904524.1	CDS	cyp189A7	NC_008611.1	330530	331732	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 189A7 Cyp189A7	330530..331732	Mycobacterium ulcerans Agy99	4552643
YP_904525.1	CDS	MUL_0326	NC_008611.1	332625	333455	D	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short chain dehydrogenase	332625..333455	Mycobacterium ulcerans Agy99	4552645
YP_904526.1	CDS	MUL_0327	NC_008611.1	333452	334258	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(333452..334258)	Mycobacterium ulcerans Agy99	4552646
YP_904527.1	CDS	MUL_0328	NC_008611.1	334267	336705	R	cytoplasmic protein; acyl-CoA transferase	complement(334267..336705)	Mycobacterium ulcerans Agy99	4552647
YP_904528.1	CDS	MUL_0330	NC_008611.1	337700	338818	R	membrane protein; function unknown, hydrolyses peptides.; aminopeptidase	complement(337700..338818)	Mycobacterium ulcerans Agy99	4552649
YP_904529.1	CDS	MUL_0331	NC_008611.1	338808	339977	R	cytoplasmic protein; hydrolysis of peptide bonds; dipeptidase	complement(338808..339977)	Mycobacterium ulcerans Agy99	4552650
YP_904530.1	CDS	cyp105Q4	NC_008611.1	341262	342506	R	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 105Q4 Cyp105Q4	complement(341262..342506)	Mycobacterium ulcerans Agy99	4552652
YP_904531.1	CDS	MUL_0334	NC_008611.1	342509	342703	R	cytoplasmic protein; ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.; ferredoxin	complement(342509..342703)	Mycobacterium ulcerans Agy99	4552653
YP_904532.1	CDS	MUL_0335	NC_008611.1	342716	343381	R	cytoplasmic protein; function unknown, maybe a transcriptional regulator; hypothetical protein	complement(342716..343381)	Mycobacterium ulcerans Agy99	4552654
YP_904533.1	CDS	MUL_0336	NC_008611.1	343471	344274	R	cytoplasmic protein; short chain dehydrogenase	complement(343471..344274)	Mycobacterium ulcerans Agy99	4552655
YP_904534.1	CDS	MUL_0338	NC_008611.1	345276	346553	R	membrane protein; thought to be involved in transport of undeterminated substrate (possibly drug) across the membrane. responsible for the translocation of the substrate across the membrane.; integral membrane transport protein	complement(345276..346553)	Mycobacterium ulcerans Agy99	4552657
YP_904535.1	CDS	lpqS	NC_008611.1	347877	348293	R	membrane protein; lipoprotein LpqS	complement(347877..348293)	Mycobacterium ulcerans Agy99	4550871
YP_904536.1	CDS	MUL_0341	NC_008611.1	348414	350072	D	Also detected in the cytoplasmic and the membrane fraction by proteomics..; membrane protein; probable oxidase, showing similarity with several oxidases, mainly L-ascorbate oxidases and copper resistance proteins; oxidase	348414..350072	Mycobacterium ulcerans Agy99	4550872
YP_904537.1	CDS	MUL_0342	NC_008611.1	350103	350921	R	Transmembrane helix. Detected in the membrane and the extracellular fractions by proteomics; membrane protein; function unknown, predicted hydrolase or acyltransferase domain.; hypothetical protein	complement(350103..350921)	Mycobacterium ulcerans Agy99	4550873
YP_904538.1	CDS	MUL_0343	NC_008611.1	350921	351913	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS) Also detected in the cytoplamic fraction by LC- MS/MS; cytoplasmic protein; putative cyclase; hypothetical protein	complement(350921..351913)	Mycobacterium ulcerans Agy99	4550874
YP_904539.1	CDS	MUL_0344	NC_008611.1	351910	352725	R	catalyzes the formation of 5-alpha-androstane-3,17-dione from androsterone; Acts on other 3-alpha-hydroxysteroids and on 9-, 11- and 15-hydroxyprostaglandin.; 3-alpha-hydroxysteroid dehydrogenase	complement(351910..352725)	Mycobacterium ulcerans Agy99	4550875
YP_904540.1	CDS	MUL_0345	NC_008611.1	352760	354061	R	cytoplasmic protein; monoxygenase	complement(352760..354061)	Mycobacterium ulcerans Agy99	4550876
YP_904541.1	CDS	MUL_0346	NC_008611.1	354064	355818	R	initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase	complement(354064..355818)	Mycobacterium ulcerans Agy99	4550877
YP_904542.1	CDS	mhpB	NC_008611.1	355815	356645	R	catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family; 3-(2,3-dihydroxyphenyl)propionate dioxygenase	complement(355815..356645)	Mycobacterium ulcerans Agy99	4550878
YP_904543.1	CDS	MUL_0348	NC_008611.1	357322	357999	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	357322..357999	Mycobacterium ulcerans Agy99	4550879
YP_904544.1	CDS	MUL_0349	NC_008611.1	358017	359627	D	membrane protein; dehydrogenase	358017..359627	Mycobacterium ulcerans Agy99	4550880
YP_904545.1	CDS	MUL_0350	NC_008611.1	359634	361028	R	membrane protein; possible sensor part of a two component regulatory system; two component sensor kinase	complement(359634..361028)	Mycobacterium ulcerans Agy99	4550881
YP_904546.1	CDS	narL	NC_008611.1	361076	361726	D	cytoplasmic protein; nitrate/nitrite response regulator protein NarL	361076..361726	Mycobacterium ulcerans Agy99	4550882
YP_904547.1	CDS	MUL_0354	NC_008611.1	364334	365872	R	membrane protein; integral membrane protein	complement(364334..365872)	Mycobacterium ulcerans Agy99	4550885
YP_904548.1	CDS	MUL_0355	NC_008611.1	365985	366284	R	membrane protein; PE-PGRS family protein	complement(365985..366284)	Mycobacterium ulcerans Agy99	4550886
YP_904549.1	CDS	MUL_0356	NC_008611.1	366373	367251	R	membrane protein; transport system kinase - possibly arginine; transport system kinase	complement(366373..367251)	Mycobacterium ulcerans Agy99	4550887
YP_904550.1	CDS	MUL_0357	NC_008611.1	367269	368468	R	cytoplasmic protein; function unknown but may be involved in fatty acid oxidation (BetA oxidation); beta-ketoacyl CoA thiolase	complement(367269..368468)	Mycobacterium ulcerans Agy99	4550888
YP_904551.1	CDS	pip	NC_008611.1	368579	369409	D	cytoplasmic protein; specifically catalyzes the removal of N-terminal proline residues from peptides. thought to release the N- terminal proline from the dipeptides, pro-pro, pro-gln, pro-trp and pro-tyr; also from amides (pro-beta na) and oligopeptides, pro-leu-glynH2, pro-leu-gly and pro-phe-gly- lys. higher activity toward small peptides (up to three residues), but very low activity for longer peptides [catalytic activity: release of a N-terminal proline from a peptide]; proline iminopeptidase PIP	368579..369409	Mycobacterium ulcerans Agy99	4554388
YP_904552.1	CDS	MUL_0359	NC_008611.1	369438	370205	R	cytoplasmic protein; lipid metabolism; enoyl-CoA hydratase	complement(369438..370205)	Mycobacterium ulcerans Agy99	4554389
YP_904553.1	CDS	MUL_0360	NC_008611.1	370207	371097	R	cytoplasmic protein; involved in lipid metabolism.; acyl-CoA dehydrogenase	complement(370207..371097)	Mycobacterium ulcerans Agy99	4554390
YP_904554.1	CDS	MUL_0361	NC_008611.1	371291	372160	R	cytoplasmic protein; involved in lipid metabolism.; acyl-CoA dehydrogenase	complement(371291..372160)	Mycobacterium ulcerans Agy99	4554391
YP_904555.1	CDS	MUL_0362	NC_008611.1	372175	373710	R	cytoplasmic protein; acyl-CoA synthetase	complement(372175..373710)	Mycobacterium ulcerans Agy99	4554392
YP_904556.1	CDS	MUL_0363	NC_008611.1	373694	373975	D	cytoplasmic protein; similar to ferredoxin reductase electron transfer proteins; electron transfer protein	373694..373975	Mycobacterium ulcerans Agy99	4554393
YP_904557.1	CDS	MUL_0364	NC_008611.1	374075	375046	R	cytoplasmic protein; acyl-CoA transferase	complement(374075..375046)	Mycobacterium ulcerans Agy99	4554394
YP_904558.1	CDS	MUL_0365	NC_008611.1	375043	375999	R	cytoplasmic protein; oxidoreductase	complement(375043..375999)	Mycobacterium ulcerans Agy99	4554395
YP_904559.1	CDS	mcmA2b	NC_008611.1	375984	376421	R	cytoplasmic protein; involved in propionic acid fermentation. catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid- cycle intermediates [catalytic activity : (R)-2-methyl-3- oxopropanoyl-CoA = succinyl- CoA]; methylmalonyl-CoA mutase subunit alpha, McmA2b	complement(375984..376421)	Mycobacterium ulcerans Agy99	4554396
YP_904560.1	CDS	mcmA2a	NC_008611.1	376422	377999	R	cytoplasmic protein; catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [catalytic activity : (R)-2-methyl-3-oxopropanoyl-CoA = succinyl- CoA] the enzyme methylmalonyl-CoA mutase is a member of a class of enzymes that uses coenzyme B12 (adenosylcobalamin) as a cofactor. the enzyme induces the formation of an adenosyl radical from the cofactor. this radical then initiates a free-radical rearrangement of its substrate, succinyl-CoA, to methylmalonyl-CoA.; methylmalonyl-CoA mutase beta subunit, McmA2a	complement(376422..377999)	Mycobacterium ulcerans Agy99	4554397
YP_904561.1	CDS	MUL_0368	NC_008611.1	378125	378937	R	cytoplasmic protein; possible methylase; hypothetical protein	complement(378125..378937)	Mycobacterium ulcerans Agy99	4554398
YP_904562.1	CDS	lpqR	NC_008611.1	378998	379807	R	membrane protein; lipoprotein LpqR	complement(378998..379807)	Mycobacterium ulcerans Agy99	4554399
YP_904563.1	CDS	MUL_0370	NC_008611.1	379918	380811	R	cytoplasmic protein; transposase for IS2404; transposase for IS2404	complement(379918..380811)	Mycobacterium ulcerans Agy99	4554400
YP_904564.1	CDS	MUL_0371	NC_008611.1	381870	382724	D	secreted protein; function unknown, contains a N-term cellobiohydrolase a (1,4-beta-cellobiosidase a) domain and a C-term cellulose-binding domain (CBD) domain. the CBD is found either at the N-term or at the C-terminal extremity of endoglucanases, cellobiohydrolases (exoglucanases), or xylanases; chitinase/cellulase	381870..382724	Mycobacterium ulcerans Agy99	4554402
YP_904565.1	CDS	MUL_0372	NC_008611.1	382743	383321	R	membrane protein; hypothetical protein	complement(382743..383321)	Mycobacterium ulcerans Agy99	4554403
YP_904566.1	CDS	crtE	NC_008611.1	383720	384712	D	cytoplasmic protein; converts farensyl pyrophosphate to geranylgeranyl pyrophosphate, the latter being the substrate for CrtB in the production of phytoene during carotenoid synthesis; geranylgeranyl pyrophosphate synthase	383720..384712	Mycobacterium ulcerans Agy99	4554404
YP_904567.1	CDS	crtB	NC_008611.1	386470	387429	D	cytoplasmic protein; part of carotenoid biosynthesis cluster - photochromogenesis; phytoene synthase, CrtB	386470..387429	Mycobacterium ulcerans Agy99	4554406
YP_904568.1	CDS	crtYc	NC_008611.1	387426	387749	D	membrane protein; involved in carotenoid biosynthesis; lycopene cyclase, CrtYc	387426..387749	Mycobacterium ulcerans Agy99	4552709
YP_904569.1	CDS	crtYd	NC_008611.1	387746	388120	D	cytoplasmic protein; involved in carotenoid biosynthesis; lycopene cyclase, CrtYd	387746..388120	Mycobacterium ulcerans Agy99	4552710
YP_904570.1	CDS	MUL_0379	NC_008611.1	390469	391020	D	cytoplasmic protein; involved in transcriptional mechanism.; MarR family transcriptional regulator	390469..391020	Mycobacterium ulcerans Agy99	4552712
YP_904571.1	CDS	idi2	NC_008611.1	391030	392076	R	catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase	complement(391030..392076)	Mycobacterium ulcerans Agy99	4552713
YP_904572.1	CDS	MUL_0381	NC_008611.1	392191	392898	R	cytoplasmic protein; hypothetical protein	complement(392191..392898)	Mycobacterium ulcerans Agy99	4552714
YP_904573.1	CDS	MUL_0382	NC_008611.1	392892	393494	R	membrane protein; hypothetical protein	complement(392892..393494)	Mycobacterium ulcerans Agy99	4552715
YP_904574.1	CDS	ansP1	NC_008611.1	393576	395060	R	membrane protein; involved in L-asparagine transport; L-asparagine permease AnsP1	complement(393576..395060)	Mycobacterium ulcerans Agy99	4552716
YP_904575.1	CDS	MUL_0384	NC_008611.1	395104	395346	R	membrane protein; hypothetical protein	complement(395104..395346)	Mycobacterium ulcerans Agy99	4552717
YP_904576.1	CDS	MUL_0385	NC_008611.1	395662	396096	R	membrane protein; function unknown, predicted ATPase domain; hypothetical protein	complement(395662..396096)	Mycobacterium ulcerans Agy99	4552718
YP_904577.1	CDS	MUL_0387	NC_008611.1	397144	398190	D	cytoplasmic protein; transposase for IS2404; transposase for IS2404	397144..398190	Mycobacterium ulcerans Agy99	4552720
YP_904578.1	CDS	MUL_0389	NC_008611.1	399429	400643	D	cytoplasmic protein; contains amidohydrolase domain; hypothetical protein	399429..400643	Mycobacterium ulcerans Agy99	4552722
YP_904579.1	CDS	MUL_0391	NC_008611.1	402249	403910	D	membrane protein; PE-PGRS family protein	402249..403910	Mycobacterium ulcerans Agy99	4552724
YP_904580.1	CDS	cspA	NC_008611.1	404179	404382	R	Detected in the secreted fraction by 2D-LC-MS/MS.; secreted protein; possibly involved in cold acclimatization processes (the production of the protein is supposed predominantly induced at low temperatures); cold shock protein a, CspA	complement(404179..404382)	Mycobacterium ulcerans Agy99	4552725
YP_904581.1	CDS	rhlE1	NC_008611.1	404475	406049	R	cytoplasmic protein; function unknown, possibly involved in ATP- dependent RNA unwinding, enzymes of this class are needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation.; ATP-dependent RNA helicase, RhlE1	complement(404475..406049)	Mycobacterium ulcerans Agy99	4552726
YP_904582.1	CDS	MUL_0394	NC_008611.1	406250	406399	D	cytoplasmic protein; hypothetical protein	406250..406399	Mycobacterium ulcerans Agy99	4553945
YP_904583.1	CDS	metH	NC_008611.1	406789	410622	D	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase	406789..410622	Mycobacterium ulcerans Agy99	4553946
YP_904584.1	CDS	MUL_0396	NC_008611.1	411028	411759	D	cytoplasmic protein; contains a nucleotidyltransferase domain; hypothetical protein	411028..411759	Mycobacterium ulcerans Agy99	4553947
YP_904585.1	CDS	MUL_0397	NC_008611.1	411698	412234	D	cytoplasmic protein; hypothetical protein	411698..412234	Mycobacterium ulcerans Agy99	4553948
YP_904586.1	CDS	MUL_0398	NC_008611.1	412514	413560	D	cytoplasmic protein; transposase for IS2404; transposase for IS2404	412514..413560	Mycobacterium ulcerans Agy99	4553949
YP_904587.1	CDS	MUL_0399	NC_008611.1	413626	414087	R	membrane protein; PPE family protein	complement(413626..414087)	Mycobacterium ulcerans Agy99	4553950
YP_904588.1	CDS	MUL_0400	NC_008611.1	414410	414655	D	With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS	414410..414655	Mycobacterium ulcerans Agy99	4553951
YP_904589.1	CDS	purQ	NC_008611.1	414652	415326	D	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I	414652..415326	Mycobacterium ulcerans Agy99	4553952
YP_904590.1	CDS	MUL_0402	NC_008611.1	415338	415802	R	cytoplasmic protein; hypothetical protein	complement(415338..415802)	Mycobacterium ulcerans Agy99	4553953
YP_904591.1	CDS	MUL_0403	NC_008611.1	415903	416367	R	cytoplasmic protein; contains mannose-6-phosphate isomerase [carbohydrate transport and metabolism]; hypothetical protein	complement(415903..416367)	Mycobacterium ulcerans Agy99	4553954
YP_904592.1	CDS	lpdB	NC_008611.1	416393	417925	R	cytoplasmic protein; contains pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component domain; dihydrolipoamide dehydrogenase, LpdB	complement(416393..417925)	Mycobacterium ulcerans Agy99	4553955
YP_904593.1	CDS	cfp29	NC_008611.1	418436	419242	R	Also detected in the extracellular matrix and membrane fraction by proteomics.; secreted protein; function unknown, high domain homology to Linocin_M18, Linocin_M18 bacteriocin protein.  the Linocin_M18 region is found mostly in eubacteria, though homologous sequences have been identified in archaea; 29 kDa antigen Cfp29	complement(418436..419242)	Mycobacterium ulcerans Agy99	4553956
YP_904594.1	CDS	MUL_0406	NC_008611.1	419239	420246	R	membrane protein; contains Dyp-type peroxidase domain. this family of dye-decolourising peroxidases lack a typical heme-binding region; hypothetical protein	complement(419239..420246)	Mycobacterium ulcerans Agy99	4553957
YP_904595.1	CDS	MUL_0409	NC_008611.1	422006	422656	R	cytoplasmic protein; domain similarity with acetyltransferases; hypothetical protein	complement(422006..422656)	Mycobacterium ulcerans Agy99	4553960
YP_904596.1	CDS	purL	NC_008611.1	422754	425051	D	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II	422754..425051	Mycobacterium ulcerans Agy99	4553961
YP_904597.1	CDS	MUL_0411	NC_008611.1	425084	425698	D	secreted protein; contains CAAX amino terminal protease domain. members of this family are probably proteases; the family contains CAAX prenyl protease. the proteins contain a highly conserved Glu-Glu motif at the amino End of the alignment. the alignment also contains two histidine residues that may be involved in zinc binding; hypothetical protein	425084..425698	Mycobacterium ulcerans Agy99	4553962
YP_904598.1	CDS	MUL_0412	NC_008611.1	425738	426706	D	cytoplasmic protein; contains phosphohydrolase domain; hypothetical protein	425738..426706	Mycobacterium ulcerans Agy99	4553963
YP_904599.1	CDS	cpsY	NC_008611.1	426651	428249	R	cytoplasmic protein; thought to be involved in exopolysaccharide and/or lipopolysaccharide biosynthetic pathway [catalytic activity: UDP-glucose = UDP-galactose]; UDP-glucose 4-epimerase	complement(426651..428249)	Mycobacterium ulcerans Agy99	4551766
YP_904600.1	CDS	mce2A	NC_008611.1	429782	430987	R	membrane protein; MCE-family protein Mce2A	complement(429782..430987)	Mycobacterium ulcerans Agy99	4551768
YP_904601.1	CDS	MUL_0416	NC_008611.1	431007	431396	D	cytoplasmic protein; hypothetical protein	431007..431396	Mycobacterium ulcerans Agy99	4551769
YP_904602.1	CDS	purF	NC_008611.1	431421	433061	D	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase	431421..433061	Mycobacterium ulcerans Agy99	4551770
YP_904603.1	CDS	purM	NC_008611.1	433065	434228	D	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase	433065..434228	Mycobacterium ulcerans Agy99	4551771
YP_904604.1	CDS	MUL_0419	NC_008611.1	434279	434458	R	cytoplasmic protein; hypothetical protein	complement(434279..434458)	Mycobacterium ulcerans Agy99	4551772
YP_904605.1	CDS	MUL_0420	NC_008611.1	434617	435708	R	cytoplasmic protein; contains predicted aminomethyltransferase domain, related to GcvT - involved in the catabolism of glycine; hypothetical protein	complement(434617..435708)	Mycobacterium ulcerans Agy99	4551773
YP_904606.1	CDS	ctpV	NC_008611.1	436343	438676	R	membrane protein; metal cation-transporting ATPase; possibly catalyzes the transport of undetermined metal cation with hydrolyse of ATP [catalytic activity: ATP + H(2)O + undetermined metal cation(in) = ADP + phosphate + undetermined metal cation (out)]; metal cation transporter p-type ATPase, CtpV	complement(436343..438676)	Mycobacterium ulcerans Agy99	4551775
YP_904607.1	CDS	MUL_0424	NC_008611.1	438732	439040	R	cytoplasmic protein; hypothetical protein	complement(438732..439040)	Mycobacterium ulcerans Agy99	4551776
YP_904608.1	CDS	MUL_0425	NC_008611.1	439142	439528	R	cytoplasmic protein; hypothetical protein	complement(439142..439528)	Mycobacterium ulcerans Agy99	4551777
YP_904609.1	CDS	pabC	NC_008611.1	439630	440520	D	catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase	439630..440520	Mycobacterium ulcerans Agy99	4551778
YP_904610.1	CDS	MUL_0429	NC_008611.1	443275	443859	R	cytoplasmic protein; N-terminal truncated in relation to orthologs; hypothetical protein	complement(443275..443859)	Mycobacterium ulcerans Agy99	4551780
YP_904611.1	CDS	MUL_0430	NC_008611.1	443942	444040	R	membrane protein; no H37Rv ortholog - very small, doubtful ORF; hypothetical protein	complement(443942..444040)	Mycobacterium ulcerans Agy99	4551781
YP_904612.1	CDS	sseC2	NC_008611.1	444097	444399	R	cytoplasmic protein; sulfur metabolism protein, SseC2	complement(444097..444399)	Mycobacterium ulcerans Agy99	4551782
YP_904613.1	CDS	cysA2	NC_008611.1	444401	445243	R	Also detected in the membrane fraction by proteomics.; cytoplasmic protein; may be a sulfotransferase involved in the formation of thiosulfate [catalytic activity: thiosulfate + cyanide = sulfite + thiocyanate]; thiosulfate sulfurtransferase, CysA2	complement(444401..445243)	Mycobacterium ulcerans Agy99	4551783
YP_904614.1	CDS	MUL_0433	NC_008611.1	445281	445748	R	membrane protein; integral membrane protein	complement(445281..445748)	Mycobacterium ulcerans Agy99	4551784
YP_904615.1	CDS	MUL_0434	NC_008611.1	446048	446860	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(446048..446860)	Mycobacterium ulcerans Agy99	4549973
YP_904616.1	CDS	MUL_0435	NC_008611.1	447264	448031	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	447264..448031	Mycobacterium ulcerans Agy99	4549974
YP_904617.1	CDS	mshD	NC_008611.1	448028	448990	D	cytoplasmic protein; involved in the fourth step of mycothiol biosynthesis; mycothiol acetyltransferase, MshD	448028..448990	Mycobacterium ulcerans Agy99	4549975
YP_904618.1	CDS	phoS3	NC_008611.1	449127	450233	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in phosphate transport; phosphate-binding protein 3 , PhoS3	449127..450233	Mycobacterium ulcerans Agy99	4549976
YP_904619.1	CDS	pstA	NC_008611.1	451319	452227	D	membrane protein; nvolved in active transport of inorganic phosphate across the membrane (import); responsible for the translocation of the substrate across the membrane. this is one of the proteins required for binding-protein- mediated phosphate transport.; phosphate-transport integral membrane ABC transporter, PstA	451319..452227	Mycobacterium ulcerans Agy99	4549978
YP_904620.1	CDS	phoT	NC_008611.1	452247	453023	D	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein	452247..453023	Mycobacterium ulcerans Agy99	4549979
YP_904621.1	CDS	phoY2	NC_008611.1	453058	453726	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; involved in transcriptional regulation of active transport of inorganic phosphate across the membrane; phosphate-transport system regulatory protein, PhoY2	complement(453058..453726)	Mycobacterium ulcerans Agy99	4549980
YP_904622.1	CDS	MUL_0444	NC_008611.1	456174	457307	R	cytoplasmic protein; domain homology - tRNA-dihydrouridine synthase [translation, ribosomal structure and biogenesis]; transcriptional regulator	complement(456174..457307)	Mycobacterium ulcerans Agy99	4549982
YP_904623.1	CDS	desA1	NC_008611.1	457316	458332	R	cytoplasmic protein; involved in mycolic acid biosynthesis; acyl-[acyl-carrier protein] desaturase DesA1	complement(457316..458332)	Mycobacterium ulcerans Agy99	4549983
YP_904624.1	CDS	MUL_0446	NC_008611.1	458500	459141	R	membrane protein; hypothetical protein	complement(458500..459141)	Mycobacterium ulcerans Agy99	4549984
YP_904625.1	CDS	MUL_0447	NC_008611.1	459215	460273	D	cytoplasmic protein; hypothetical protein	459215..460273	Mycobacterium ulcerans Agy99	4549985
YP_904626.1	CDS	MUL_0448	NC_008611.1	460485	460856	R	cytoplasmic protein; transcription regulator ArsR	complement(460485..460856)	Mycobacterium ulcerans Agy99	4549987
YP_904627.1	CDS	MUL_0449	NC_008611.1	460914	461222	R	cytoplasmic protein; function unknown, domain homology to CumB, cytosine/adenosine deaminases.; hypothetical protein	complement(460914..461222)	Mycobacterium ulcerans Agy99	4549988
YP_904628.1	CDS	MUL_0450	NC_008611.1	461316	462221	D	membrane protein; function unknown, may be involved in polyketide biosynthesis [secondary metabolites biosynthesis, transport, and catabolism]; O-methyltransferase	461316..462221	Mycobacterium ulcerans Agy99	4549989
YP_904629.1	CDS	MUL_0452	NC_008611.1	463178	464224	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	463178..464224	Mycobacterium ulcerans Agy99	4552776
YP_904630.1	CDS	MUL_0453	NC_008611.1	464190	465446	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; domain: regulator of polyketide synthase expression; hypothetical protein	complement(464190..465446)	Mycobacterium ulcerans Agy99	4552777
YP_904631.1	CDS	atsD	NC_008611.1	465476	467974	D	membrane protein; thought to play an important role in the mineralization of sulfates [catalytic activity: a phenol sulfate + H2O = a phenol + sulfate]; arylsulfatase AtsD	465476..467974	Mycobacterium ulcerans Agy99	4552778
YP_904632.1	CDS	MUL_0456	NC_008611.1	469958	470461	D	cytoplasmic protein; putative OHCU decarboxylase	469958..470461	Mycobacterium ulcerans Agy99	4552780
YP_904633.1	CDS	MUL_0457	NC_008611.1	470448	470819	D	cytoplasmic protein; domain homology: transthyretin, transthyretin precursor (formerly prealbumin) transthyretin is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain. mutations in the human transthyretin are associated with several genetic disorders; hypothetical protein	470448..470819	Mycobacterium ulcerans Agy99	4552781
YP_904634.1	CDS	MUL_0458	NC_008611.1	470635	471642	D	membrane protein; domain: xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [nucleotide transport and metabolism]; hypothetical protein	470635..471642	Mycobacterium ulcerans Agy99	4552782
YP_904635.1	CDS	MUL_0459	NC_008611.1	471639	474341	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; carbon monoxide dehydrogenase	471639..474341	Mycobacterium ulcerans Agy99	4552783
YP_904636.1	CDS	MUL_0460	NC_008611.1	474330	475259	R	cytoplasmic protein; function unknown, contains a UbiH domain, 2- polyprenyl-6-methoxyphenol hydroxylase and related FAD- dependent oxidoreductases [coenzyme metabolism / energy production and conversion]; hypothetical protein	complement(474330..475259)	Mycobacterium ulcerans Agy99	4552784
YP_904637.1	CDS	MUL_0462	NC_008611.1	475563	476291	R	Detected in the membrane fraction by proteomics.; membrane protein; hypothetical protein	complement(475563..476291)	Mycobacterium ulcerans Agy99	4552786
YP_904638.1	CDS	phoP	NC_008611.1	476453	477175	D	Detected in the membrane fraction by proteomics; membrane protein; involved in transcriptional mechanism. part of the two component regulatory system PhoP/PhoQ. this protein is thought to be a positive regulator for the phosphate regulon, required for intracellular growth. transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited; two component system response phosphate regulon transcriptional regulator, PhoP	476453..477175	Mycobacterium ulcerans Agy99	4552787
YP_904639.1	CDS	phoR	NC_008611.1	477216	478661	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; sensor part of a two component regulatory system. this protein is thought to be a sensor kinase for the phosphate regulon. transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited; two component system response phosphate sensor kinase, PhoR	477216..478661	Mycobacterium ulcerans Agy99	4552788
YP_904640.1	CDS	MUL_0465	NC_008611.1	478668	479072	R	Detected in the extracellular matrix by proteomics. Also detected in the cytoplasmic fraction by 2D-LC-MS/MS.; cytoplasmic protein; Hit family protein: diadenosine tetraphosphate (Ap4A) hydrolase and other Hit family hydrolases [nucleotide transport and metabolism / carbohydrate transport and metabolism / general function prediction only]; hypothetical protein	complement(478668..479072)	Mycobacterium ulcerans Agy99	4552789
YP_904641.1	CDS	MUL_0467	NC_008611.1	480897	482339	D	secreted protein; hypothetical protein	480897..482339	Mycobacterium ulcerans Agy99	4552791
YP_904642.1	CDS	MUL_0468	NC_008611.1	482341	482760	R	cytoplasmic protein; contains nuclear transport factor 2 (NTF2) domain; hypothetical protein	complement(482341..482760)	Mycobacterium ulcerans Agy99	4552792
YP_904643.1	CDS	MUL_0469	NC_008611.1	482763	483047	R	cytoplasmic protein; function unknown, domain homology suggests possible NADH:flavin oxidoreductase; hypothetical protein	complement(482763..483047)	Mycobacterium ulcerans Agy99	4552793
YP_904644.1	CDS	adhB	NC_008611.1	483077	484204	R	membrane protein; thought to catalyze the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. probably acts on primary or secondary alcohols or hemiacetals [catalytic activity: an alcohol + NAD+ = an aldehyde or ketone + NADH]; zinc-containing alcohol dehydrogenase NAD- dependent AdhB	complement(483077..484204)	Mycobacterium ulcerans Agy99	4550676
YP_904645.1	CDS	MUL_0471	NC_008611.1	484367	484912	R	cytoplasmic protein; hypothetical protein	complement(484367..484912)	Mycobacterium ulcerans Agy99	4550677
YP_904646.1	CDS	MUL_0472	NC_008611.1	484918	485124	R	cytoplasmic protein; ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. probably involved in electron transport for cytochrome P- 450 system.; ferredoxin	complement(484918..485124)	Mycobacterium ulcerans Agy99	4550678
YP_904647.1	CDS	cyp51B1	NC_008611.1	485124	486494	R	cytoplasmic protein; involved in sterol biosynthesis. its biological substrate is not known. catalyzes C14-demethylation of lanosterol, 24,25-dihydrolanosterol and obtusifoliol which is critical for ergosterol biosynthesis. it transforms lanosterol into 4,4'-dimethyl cholesta-8,14,24-triene-3- beta-ol.; cytochrome P450 51B1 Cyp51B1	complement(485124..486494)	Mycobacterium ulcerans Agy99	4550679
YP_904648.1	CDS	MUL_0474	NC_008611.1	486491	487315	R	membrane protein; function unknown, domain homology to short-chain dehydrogenase/reductase family; short chain dehydrogenase	complement(486491..487315)	Mycobacterium ulcerans Agy99	4550680
YP_904649.1	CDS	cyp123A3	NC_008611.1	487315	488535	R	cytoplasmic protein; cytochrome P450s are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics; cytochrome P450 123A3 Cyp123A3	complement(487315..488535)	Mycobacterium ulcerans Agy99	4550681
YP_904650.1	CDS	MUL_0476	NC_008611.1	488532	488951	R	membrane protein; hypothetical protein	complement(488532..488951)	Mycobacterium ulcerans Agy99	4550682
YP_904651.1	CDS	aldA	NC_008611.1	489411	490880	D	cytoplasmic protein; oxidizes a variety of aldehydes [catalytic activity: an aldehyde + NAD+ + H2O = an acid + NADH]; NAD-dependent aldehyde dehydrogenase AldA	489411..490880	Mycobacterium ulcerans Agy99	4550683
YP_904652.1	CDS	MUL_0478	NC_008611.1	490891	491643	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; short chain dehydrogenase	490891..491643	Mycobacterium ulcerans Agy99	4550684
YP_904653.1	CDS	MUL_0480	NC_008611.1	492554	492991	D	cytoplasmic protein; involved in aromatic hydrocarbons catabolism. thought to be involved in the catabolism of protocatechuate to succinate-and acetyl-CoA in the beta- ketoadipate pathway (at the third step) [catalytic activity: 2-carboxy-5-oxo-2,5-dihydrofuran-2-acetate = 5- oxo-4,5-dihydrofuran-2-acetate + CO(2)]; 4-carboxymuconolactone decarboxylase	492554..492991	Mycobacterium ulcerans Agy99	4550686
YP_904654.1	CDS	purD	NC_008611.1	493030	494298	D	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase	493030..494298	Mycobacterium ulcerans Agy99	4550687
YP_904655.1	CDS	pknF_2	NC_008611.1	494338	495840	R	membrane protein; involved in signal transduction (via phosphorylation) [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; serine/threonine-protein kinase PknF_2	complement(494338..495840)	Mycobacterium ulcerans Agy99	4550688
YP_904656.1	CDS	MUL_0483	NC_008611.1	496226	497140	D	cytoplasmic protein; domain: UspA, universal stress protein UspA and related nucleotide-binding proteins [signal transduction mechanisms]; hypothetical protein	496226..497140	Mycobacterium ulcerans Agy99	4550689
YP_904657.1	CDS	moeY	NC_008611.1	497169	499463	R	membrane protein; involved in biosynthesis of a demolybdo cofactor (molybdopterin), necessary for molybdoenzymes. plays a role in the activation of the small subunit of the molybdopterin converting factor (MoaD); hypothetical protein	complement(497169..499463)	Mycobacterium ulcerans Agy99	4550690
YP_904658.1	CDS	MUL_0485	NC_008611.1	499537	500583	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	499537..500583	Mycobacterium ulcerans Agy99	4550691
YP_904659.1	CDS	ggtA	NC_008611.1	501119	502528	R	cytoplasmic protein; besides the cephalosporin acylase I activity which converts GL-7ACA into 7-Aca; this enzyme displays some gamma glutamyltranspeptidase activity: Ggt plays a key role in the gamma-glutamyl cycle, a pathway for the synthesis and degradation of glutathione. [catalytic activity 1: 7-beta-(4-carboxybutanamido)-cephalosporanic acid + H2O = 7-aminocephalosporanic acid + glutaric acid] [catalytic activity 2: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid]; bifunctional acylase, GgtA	complement(501119..502528)	Mycobacterium ulcerans Agy99	4550692
YP_904660.1	CDS	MUL_0487	NC_008611.1	502580	503518	R	membrane protein; function unknown, contains esterase domain; hypothetical protein	complement(502580..503518)	Mycobacterium ulcerans Agy99	4551981
YP_904661.1	CDS	MUL_0488	NC_008611.1	503553	504122	D	membrane protein; contains transcriptional regulatory domain; hypothetical protein	503553..504122	Mycobacterium ulcerans Agy99	4551982
YP_904662.1	CDS	MUL_0489	NC_008611.1	504163	504924	R	cytoplasmic protein; hypothetical protein	complement(504163..504924)	Mycobacterium ulcerans Agy99	4551983
YP_904663.1	CDS	purB	NC_008611.1	505043	506470	D	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase	505043..506470	Mycobacterium ulcerans Agy99	4551984
YP_904664.1	CDS	cyp126A3	NC_008611.1	506467	507723	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 126A3 Cyp126A3	506467..507723	Mycobacterium ulcerans Agy99	4551985
YP_904665.1	CDS	MUL_0492	NC_008611.1	508010	509218	D	membrane protein; PPE family protein	508010..509218	Mycobacterium ulcerans Agy99	4551986
YP_904666.1	CDS	MUL_0493	NC_008611.1	509422	510711	D	cytoplasmic protein; possibly involed in transcription regulation; DNA- binding.; putative regulatory protein	509422..510711	Mycobacterium ulcerans Agy99	4551987
YP_904667.1	CDS	MUL_0494	NC_008611.1	510843	512366	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; interconversion aldehyde and acid [catalytic activity: an aldehyde + NAD+ + H2O = an acid + NADH]; aldehyde dehydrogenase	510843..512366	Mycobacterium ulcerans Agy99	4551988
YP_904668.1	CDS	adhX	NC_008611.1	512418	513479	D	cytoplasmic protein; Zn-dependent alcohol dehydrogenase, AdhX	512418..513479	Mycobacterium ulcerans Agy99	4551989
YP_904669.1	CDS	MUL_0496	NC_008611.1	513470	514090	R	membrane protein; transmembrane protein	complement(513470..514090)	Mycobacterium ulcerans Agy99	4551990
YP_904670.1	CDS	purC	NC_008611.1	514155	515048	D	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase	514155..515048	Mycobacterium ulcerans Agy99	4551991
YP_904671.1	CDS	ptrB	NC_008611.1	515027	517162	D	cytoplasmic protein; cleaves peptide bonds on the C-terminal side of LysYL and argininyl residues [catalytic activity: hydrolysis of arg-|-xaa and lys-|-xaa bonds in oligopeptides, even when P1' residue is proline]; protease II (oligopeptidase B), PtrB	515027..517162	Mycobacterium ulcerans Agy99	4551992
YP_904672.1	CDS	MUL_0499	NC_008611.1	517121	517570	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(517121..517570)	Mycobacterium ulcerans Agy99	4551993
YP_904673.1	CDS	MUL_0500	NC_008611.1	517665	518381	D	cytoplasmic protein; TetR-family; transcriptional regulator	517665..518381	Mycobacterium ulcerans Agy99	4551994
YP_904674.1	CDS	MUL_0501	NC_008611.1	518175	519836	R	membrane protein; translocase that confers resistance to substances of high hydrophobicity. involved in transport of multidrug across the membrane (export): multidrug resistance by an export mechanism. responsible for the translocation of the substrate across the membrane.; integral membrane drug efflux protein	complement(518175..519836)	Mycobacterium ulcerans Agy99	4551995
YP_904675.1	CDS	MUL_0502	NC_008611.1	520005	520709	D	cytoplasmic protein; hypothetical protein	520005..520709	Mycobacterium ulcerans Agy99	4551996
YP_904676.1	CDS	MUL_0503	NC_008611.1	520667	521713	R	membrane protein; hypothetical protein	complement(520667..521713)	Mycobacterium ulcerans Agy99	4551997
YP_904677.1	CDS	MUL_0504	NC_008611.1	521765	521959	R	hypothetical protein	complement(521765..521959)	Mycobacterium ulcerans Agy99	4551998
YP_904678.1	CDS	MUL_0505	NC_008611.1	521934	522296	R	secreted protein; hypothetical protein	complement(521934..522296)	Mycobacterium ulcerans Agy99	4551999
YP_904679.1	CDS	MUL_0506	NC_008611.1	522629	522979	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	522629..522979	Mycobacterium ulcerans Agy99	4550747
YP_904680.1	CDS	MUL_0507	NC_008611.1	523049	523675	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	523049..523675	Mycobacterium ulcerans Agy99	4550748
YP_904681.1	CDS	MUL_0508	NC_008611.1	523885	524253	D	cytoplasmic protein; hypothetical protein	523885..524253	Mycobacterium ulcerans Agy99	4550749
YP_904682.1	CDS	MUL_0509	NC_008611.1	524368	524871	D	cytoplasmic protein; excisionase	524368..524871	Mycobacterium ulcerans Agy99	4550750
YP_904683.1	CDS	MUL_0510	NC_008611.1	524902	525072	D	cytoplasmic protein; hypothetical protein	524902..525072	Mycobacterium ulcerans Agy99	4550751
YP_904684.1	CDS	MUL_0511	NC_008611.1	525269	525502	D	cytoplasmic protein; hypothetical protein	525269..525502	Mycobacterium ulcerans Agy99	4550752
YP_904685.1	CDS	MUL_0512	NC_008611.1	525804	527240	D	cytoplasmic protein; hypothetical protein	525804..527240	Mycobacterium ulcerans Agy99	4550753
YP_904686.1	CDS	MUL_0513	NC_008611.1	527247	528020	R	cytoplasmic protein; hypothetical protein	complement(527247..528020)	Mycobacterium ulcerans Agy99	4550754
YP_904687.1	CDS	MUL_0515	NC_008611.1	528829	530424	D	cytoplasmic protein; hypothetical protein	528829..530424	Mycobacterium ulcerans Agy99	4550756
YP_904688.1	CDS	MUL_0516	NC_008611.1	530613	531470	D	cytoplasmic protein; hypothetical protein	530613..531470	Mycobacterium ulcerans Agy99	4550757
YP_904689.1	CDS	MUL_0517	NC_008611.1	531483	531635	D	cytoplasmic protein; hypothetical protein	531483..531635	Mycobacterium ulcerans Agy99	4550758
YP_904690.1	CDS	MUL_0518	NC_008611.1	531637	532416	D	membrane protein; frameshift mutant?; hypothetical protein	531637..532416	Mycobacterium ulcerans Agy99	4550759
YP_904691.1	CDS	MUL_0520	NC_008611.1	533642	534985	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	533642..534985	Mycobacterium ulcerans Agy99	4550761
YP_904692.1	CDS	MUL_0521	NC_008611.1	535354	536400	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	535354..536400	Mycobacterium ulcerans Agy99	4552236
YP_904693.1	CDS	MUL_0523	NC_008611.1	537317	537520	D	cytoplasmic protein; hypothetical protein	537317..537520	Mycobacterium ulcerans Agy99	4552238
YP_904694.1	CDS	MUL_0524	NC_008611.1	537534	537968	R	cytoplasmic protein; may be an ADP-ribose pyrophosphatase - involved DNA replication, recombination, and repair; hypothetical protein	complement(537534..537968)	Mycobacterium ulcerans Agy99	4552239
YP_904695.1	CDS	MUL_0525	NC_008611.1	538041	538835	D	GntR-family transcriptional regulator; Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; transcriptional regulatory protein	538041..538835	Mycobacterium ulcerans Agy99	4552240
YP_904696.1	CDS	MUL_0526	NC_008611.1	538935	539357	D	cytoplasmic protein; hypothetical protein	538935..539357	Mycobacterium ulcerans Agy99	4552241
YP_904697.1	CDS	MUL_0527	NC_008611.1	539414	540676	D	membrane protein; contains FtsK domain: FtsK has extensive sequence similarity to wide variety of proteins from prokaryotes and plasmids, termed the FtsK/SpoIIIE family. this domain contains a putative ATP binding P-loop motif. it is found in the FtsK cell division protein from E. coli and the stage III sporulation protein E SpoIIIE, which has roles in regulation of prespore specific gene expression in B. subtilis. a mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification. the SpoIIIE protein is implicated in intercellular chromosomal DNA transfer.; hypothetical protein	539414..540676	Mycobacterium ulcerans Agy99	4552242
YP_904698.1	CDS	MUL_0528	NC_008611.1	540685	540948	D	cytoplasmic protein; hypothetical protein	540685..540948	Mycobacterium ulcerans Agy99	4552243
YP_904699.1	CDS	MUL_0529	NC_008611.1	540948	542117	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS; cytoplasmic protein; part of a prophage not present in M. marinum; prophage integrase	540948..542117	Mycobacterium ulcerans Agy99	4552244
YP_904700.1	CDS	MUL_0535	NC_008611.1	543034	544080	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(543034..544080)	Mycobacterium ulcerans Agy99	4549991
YP_904701.1	CDS	echA8_3	NC_008611.1	544542	545348	R	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(544542..545348)	Mycobacterium ulcerans Agy99	4549992
YP_904702.1	CDS	MUL_0538	NC_008611.1	546180	547226	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	546180..547226	Mycobacterium ulcerans Agy99	4549994
YP_904703.1	CDS	amiC_2	NC_008611.1	548714	550207	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; hydrolyzes a monocarboxylic acid amide and generates a monocarboxylate [catalytic activity: a monocarboxylic acid amide + H(2)O = a monocarboxylate + NH(3)]; amidase	548714..550207	Mycobacterium ulcerans Agy99	4549995
YP_904704.1	CDS	MUL_0542	NC_008611.1	552061	553314	D	membrane protein; function unknown, facilitates transport of small solutes in or out of the cell.; multidrug resistance integral membrane efflux protein	552061..553314	Mycobacterium ulcerans Agy99	4549997
YP_904705.1	CDS	MUL_0544	NC_008611.1	553832	554593	D	membrane protein; dehydrogenase	553832..554593	Mycobacterium ulcerans Agy99	4549999
YP_904706.1	CDS	MUL_0545	NC_008611.1	554604	555272	D	cytoplasmic protein; hydrolase	554604..555272	Mycobacterium ulcerans Agy99	4550000
YP_904707.1	CDS	MUL_0546	NC_008611.1	555279	556121	D	membrane protein; domain homology to NagC, transcriptional regulator/sugar kinase [transcription / carbohydrate transport and metabolism]; glucose kinase	555279..556121	Mycobacterium ulcerans Agy99	4550001
YP_904708.1	CDS	MUL_0548	NC_008611.1	557383	558168	D	membrane protein; epimerase	557383..558168	Mycobacterium ulcerans Agy99	4550003
YP_904709.1	CDS	MUL_0549	NC_008611.1	558273	559166	D	cytoplasmic protein; hypothetical protein	558273..559166	Mycobacterium ulcerans Agy99	4550004
YP_904710.1	CDS	MUL_5123	NC_008611.1	559251	559460	R	cytoplasmic protein; hypothetical protein	complement(559251..559460)	Mycobacterium ulcerans Agy99	4550005
YP_904711.1	CDS	MUL_0550	NC_008611.1	559999	561045	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	559999..561045	Mycobacterium ulcerans Agy99	4550693
YP_904712.1	CDS	MUL_0551	NC_008611.1	561042	561290	R	cytoplasmic protein; hypothetical protein	complement(561042..561290)	Mycobacterium ulcerans Agy99	4550694
YP_904713.1	CDS	MUL_0552	NC_008611.1	561291	561713	R	cytoplasmic protein; hypothetical protein	complement(561291..561713)	Mycobacterium ulcerans Agy99	4550695
YP_904714.1	CDS	MUL_0554	NC_008611.1	562014	562793	R	membrane protein; involved in transcriptional mechanism.; transcriptional regulatory protein	complement(562014..562793)	Mycobacterium ulcerans Agy99	4550697
YP_904715.1	CDS	MUL_0556	NC_008611.1	564418	564798	D	cytoplasmic protein; hypothetical protein	564418..564798	Mycobacterium ulcerans Agy99	4550699
YP_904716.1	CDS	MUL_0559	NC_008611.1	565709	566377	D	secreted protein; maybe exported; hypothetical protein	565709..566377	Mycobacterium ulcerans Agy99	4550701
YP_904717.1	CDS	dcd	NC_008611.1	566423	566995	D	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase	566423..566995	Mycobacterium ulcerans Agy99	4550702
YP_904718.1	CDS	MUL_0562	NC_008611.1	568350	568718	R	cytoplasmic protein; hypothetical protein	complement(568350..568718)	Mycobacterium ulcerans Agy99	4550704
YP_904719.1	CDS	MUL_0566	NC_008611.1	571803	572558	D	cytoplasmic protein; hypothetical protein	571803..572558	Mycobacterium ulcerans Agy99	4550707
YP_904720.1	CDS	MUL_0567	NC_008611.1	572585	572968	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	572585..572968	Mycobacterium ulcerans Agy99	4550708
YP_904721.1	CDS	rmlA	NC_008611.1	572998	573864	D	cytoplasmic protein; dTDP-L-rhamnose biosynthesis within the O antigen biosynthesis pathway of lipopolysaccharide biosynthesis [catalytic activity: dTTP + alpha-D-glucose 1-phosphate = diphosphate + dTDP-glucose]; alpha-D-glucose-1-phosphate thymidylyl- transferase, RmlA	572998..573864	Mycobacterium ulcerans Agy99	4552727
YP_904722.1	CDS	MUL_0569	NC_008611.1	573898	574929	R	membrane protein; function unknown. seems to influence both cell surface interactions among mycobacteria and the interactions of the bacteria with macrophages.; PE PGRS family protein	complement(573898..574929)	Mycobacterium ulcerans Agy99	4552728
YP_904723.1	CDS	MUL_0570	NC_008611.1	575111	576157	R	membrane protein; PE PGRS family protein	complement(575111..576157)	Mycobacterium ulcerans Agy99	4552729
YP_904724.1	CDS	MUL_0571	NC_008611.1	576289	577182	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(576289..577182)	Mycobacterium ulcerans Agy99	4552730
YP_904725.1	CDS	MUL_0572	NC_008611.1	577925	580594	D	membrane protein; function unknown, member of the mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins; PE-PGRS family protein	577925..580594	Mycobacterium ulcerans Agy99	4552731
YP_904726.1	CDS	aspC	NC_008611.1	580688	581977	R	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT	complement(580688..581977)	Mycobacterium ulcerans Agy99	4552732
YP_904727.1	CDS	MUL_0574	NC_008611.1	582008	584956	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; iron-sulfur-binding reductase	complement(582008..584956)	Mycobacterium ulcerans Agy99	4552733
YP_904728.1	CDS	MUL_0575	NC_008611.1	585218	586561	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(585218..586561)	Mycobacterium ulcerans Agy99	4552734
YP_904729.1	CDS	MUL_0576	NC_008611.1	587077	587970	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	587077..587970	Mycobacterium ulcerans Agy99	4552735
YP_904730.1	CDS	MUL_0578	NC_008611.1	590363	590902	D	cytoplasmic protein; hypothetical protein	590363..590902	Mycobacterium ulcerans Agy99	4552737
YP_904731.1	CDS	iniB	NC_008611.1	591184	594051	D	membrane protein; function unknown function but ortholog in M.tuberculosis induced by isoniazid and ethionamide.; membrane protein, IniB	591184..594051	Mycobacterium ulcerans Agy99	4552738
YP_904732.1	CDS	iniA	NC_008611.1	594152	595993	D	membrane protein; in M. tuberculosis H37Rv this gene is induced by isoniazid (INH) or ethionamide treatment) (see Wilson et al., 1999); hypothetical protein	594152..595993	Mycobacterium ulcerans Agy99	4552739
YP_904733.1	CDS	iniC	NC_008611.1	595990	597471	D	membrane protein; in M. tuberculosis H37Rv IniC is an isoniazid- inducible gene; protein IniC	595990..597471	Mycobacterium ulcerans Agy99	4552740
YP_904734.1	CDS	MUL_0582	NC_008611.1	597476	599296	R	membrane protein; hypothetical protein	complement(597476..599296)	Mycobacterium ulcerans Agy99	4552741
YP_904735.1	CDS	MUL_0583	NC_008611.1	599379	599903	R	membrane protein; hypothetical protein	complement(599379..599903)	Mycobacterium ulcerans Agy99	4553498
YP_904736.1	CDS	MUL_0584	NC_008611.1	600011	600592	R	membrane protein; hypothetical protein	complement(600011..600592)	Mycobacterium ulcerans Agy99	4553499
YP_904737.1	CDS	lpqJ	NC_008611.1	600629	601192	R	membrane protein; lipoprotein LpqJ	complement(600629..601192)	Mycobacterium ulcerans Agy99	4553500
YP_904738.1	CDS	coxM_2	NC_008611.1	601753	602640	R	cytoplasmic protein; aerobic-type carbon monoxide dehydrogenase subunit CoxM_2	complement(601753..602640)	Mycobacterium ulcerans Agy99	4553502
YP_904739.1	CDS	coxL_2	NC_008611.1	602637	604967	R	cytoplasmic protein; aerobic-type carbon monoxide dehydrogenase subunit CoxL_2	complement(602637..604967)	Mycobacterium ulcerans Agy99	4553503
YP_904740.1	CDS	MUL_0589	NC_008611.1	605118	605648	D	membrane protein; hypothetical protein	605118..605648	Mycobacterium ulcerans Agy99	4553504
YP_904741.1	CDS	dnaK	NC_008611.1	608083	609951	D	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK	608083..609951	Mycobacterium ulcerans Agy99	4553507
YP_904742.1	CDS	grpE	NC_008611.1	609948	610601	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; stimulates, jointly with DnaJ, the ATPase activity of DnaK. helps to release ADP from DnaK thus allowing DnaK to recycle more efficiently. seems to be regulated negatively by HspR.; GrpE protein (Hsp-70 cofactor)	609948..610601	Mycobacterium ulcerans Agy99	4553508
YP_904743.1	CDS	dnaJ	NC_008611.1	610659	611849	D	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ	610659..611849	Mycobacterium ulcerans Agy99	4553509
YP_904744.1	CDS	hspR	NC_008611.1	611850	612332	D	Extended C-term caused by point mutation removing stop codon. This CDS now overlap the C-term of the d/s CDS.; cytoplasmic protein; involved in transcriptional regulation (repression) of heat shock proteins e.g. DnaK, GrpE, DnaJ. binds to three inverted repeats (IR1-IR3) in the promoter region of the DnaK operon. induction: by heat shock.; heat shock protein transcriptional repressor HspR	611850..612332	Mycobacterium ulcerans Agy99	4553510
YP_904745.1	CDS	MUL_0598	NC_008611.1	616018	617352	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	616018..617352	Mycobacterium ulcerans Agy99	4553512
YP_904746.1	CDS	MUL_0601	NC_008611.1	619158	620489	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(619158..620489)	Mycobacterium ulcerans Agy99	4550762
YP_904747.1	CDS	cyp185A4	NC_008611.1	622440	623855	R	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. some have been shown to bind tightly to a range of azole-based antifungal drugs (E.G. miconazole, clotrimazole); cytochrome P450 185A4 Cyp185A4	complement(622440..623855)	Mycobacterium ulcerans Agy99	4550763
YP_904748.1	CDS	MUL_0605	NC_008611.1	624817	625266	R	cytoplasmic protein; hypothetical protein	complement(624817..625266)	Mycobacterium ulcerans Agy99	4550764
YP_904749.1	CDS	MUL_0606	NC_008611.1	625492	626829	D	membrane protein; membrane acyltransferase	625492..626829	Mycobacterium ulcerans Agy99	4550765
YP_904750.1	CDS	MUL_0607	NC_008611.1	626914	627666	D	secreted protein; function unknown, domain identity to secreted hydrolases of the SgnH_hydrolase subfamily; hypothetical protein	626914..627666	Mycobacterium ulcerans Agy99	4550766
YP_904751.1	CDS	MUL_0608	NC_008611.1	627736	627852	R	membrane protein; hypothetical protein	complement(627736..627852)	Mycobacterium ulcerans Agy99	4550767
YP_904752.1	CDS	MUL_0609	NC_008611.1	627964	630009	R	membrane protein; transmembrane acyltransferase	complement(627964..630009)	Mycobacterium ulcerans Agy99	4550768
YP_904753.1	CDS	MUL_0610	NC_008611.1	630176	631084	R	membrane protein; has homology to a putative esterase domain; hypothetical protein	complement(630176..631084)	Mycobacterium ulcerans Agy99	4550769
YP_904754.1	CDS	MUL_0611	NC_008611.1	631231	632223	D	cytoplasmic protein; some similarity to universal stress protein UspA.; hypothetical protein	631231..632223	Mycobacterium ulcerans Agy99	4550770
YP_904755.1	CDS	ctpF	NC_008611.1	632275	634992	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; metal cation-transporting ATPase; possibly catalyzes the transport of a undeterminated metal cation with the hydrolyse of ATP [catalytic activity: ATP + H(2)O + undetermined metal cation(in) = ADP + phosphate + undetermined metal cation(out); metal cation-transporting p-type ATPase F, CtpF	632275..634992	Mycobacterium ulcerans Agy99	4550771
YP_904756.1	CDS	MUL_0614	NC_008611.1	636161	637207	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(636161..637207)	Mycobacterium ulcerans Agy99	4550773
YP_904757.1	CDS	apbA	NC_008611.1	639830	640747	R	membrane protein; ketopantoate reductase PanE/ApbA. this is a family of 2-dehydropantoate 2-reductases also known as ketopantoate reductases. the reaction catalysed by this enzyme is: (R)-pantoate + NADP(+) <=> 2-dehydropantoate + NADPH. AbpA catalyses the NADPH reduction of ketopantoic acid to pantoic acid in the alternative pyrimidine biosynthetic (APB) pathway. ApbA and pane are allelic. ApbA, the ketopantoate reductase enzyme is required for the synthesis of thiamine via the APB biosynthetic pathway.; ketopantoate reductase, ApbA	complement(639830..640747)	Mycobacterium ulcerans Agy99	4550775
YP_904758.1	CDS	MUL_0619	NC_008611.1	642133	642480	D	cytoplasmic protein; hypothetical protein	642133..642480	Mycobacterium ulcerans Agy99	4550777
YP_904759.1	CDS	MUL_0620	NC_008611.1	642477	642776	R	cytoplasmic protein; hypothetical protein	complement(642477..642776)	Mycobacterium ulcerans Agy99	4550778
YP_904760.1	CDS	hemL	NC_008611.1	645805	647136	D	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase	645805..647136	Mycobacterium ulcerans Agy99	4551620
YP_904761.1	CDS	MUL_0624	NC_008611.1	647136	647744	D	cytoplasmic protein; contains fructose-2,6-bisphosphatase domain [carbohydrate transport and metabolism]; hypothetical protein	647136..647744	Mycobacterium ulcerans Agy99	4551621
YP_904762.1	CDS	MUL_0625	NC_008611.1	647741	648358	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; thioredoxin protein	647741..648358	Mycobacterium ulcerans Agy99	4551622
YP_904763.1	CDS	ccsA	NC_008611.1	648355	649146	D	membrane protein; required during cytochrome biogenesis at the step of HemE attachment.; cytochrome C-type biogenesis protein, CcsA	648355..649146	Mycobacterium ulcerans Agy99	4551623
YP_904764.1	CDS	MUL_0627	NC_008611.1	649143	650822	D	membrane protein; required for cytochrome C biosynthesis; ResB-family protein	649143..650822	Mycobacterium ulcerans Agy99	4551624
YP_904765.1	CDS	ccsB	NC_008611.1	650819	651805	D	membrane protein; required during cytochrome biogenesis at the step of HemE attachment.; cytochrome C-type biogenesis protein, CcsB	650819..651805	Mycobacterium ulcerans Agy99	4551625
YP_904766.1	CDS	MUL_0630	NC_008611.1	653170	653322	R	membrane protein; hypothetical protein	complement(653170..653322)	Mycobacterium ulcerans Agy99	4551627
YP_904767.1	CDS	MUL_0631	NC_008611.1	653369	653737	D	membrane protein; hypothetical protein	653369..653737	Mycobacterium ulcerans Agy99	4551628
YP_904768.1	CDS	fabH	NC_008611.1	653745	654752	R	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase	complement(653745..654752)	Mycobacterium ulcerans Agy99	4551629
YP_904769.1	CDS	menA	NC_008611.1	654851	655777	R	catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase	complement(654851..655777)	Mycobacterium ulcerans Agy99	4551630
YP_904770.1	CDS	pnp	NC_008611.1	655767	656561	D	Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase	655767..656561	Mycobacterium ulcerans Agy99	4551631
YP_904771.1	CDS	galE3	NC_008611.1	656558	657598	D	cytoplasmic protein; involved in galactose metabolism [catalytic activity: UDP-glucose = UDP-galactose]; UDP-glucose 4-epimerase	656558..657598	Mycobacterium ulcerans Agy99	4551632
YP_904772.1	CDS	MUL_0636	NC_008611.1	657606	659228	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(657606..659228)	Mycobacterium ulcerans Agy99	4551633
YP_904773.1	CDS	MUL_0637	NC_008611.1	659546	661390	D	membrane protein; hypothetical protein	659546..661390	Mycobacterium ulcerans Agy99	4551634
YP_904774.1	CDS	MUL_0638	NC_008611.1	661420	662076	D	cytoplasmic protein; substrate (sugar) unknown [catalytic activity: NDP- sugar + dolichyl phosphate = NDP + dolichyl sugar phosphate]; glycosyl transferase - dolichol-P-sugar synthase	661420..662076	Mycobacterium ulcerans Agy99	4551635
YP_904775.1	CDS	MUL_0639	NC_008611.1	662073	662735	D	cytoplasmic protein; hypothetical protein	662073..662735	Mycobacterium ulcerans Agy99	4551636
YP_904776.1	CDS	MUL_0640	NC_008611.1	662767	664119	R	membrane protein; hypothetical protein	complement(662767..664119)	Mycobacterium ulcerans Agy99	4551637
YP_904777.1	CDS	menE	NC_008611.1	664131	665240	R	cytoplasmic protein; involved in menaquinone biosynthesis. O- succinylbenzoic acid (OSB) to O-succinylbenzoyl-CoA (OSB- CoA) [catalytic activity: ATP + O-succinylbenzoate + CoA = AMP + diphosphate + O-succinylbenzoyl-CoA]; O-succinylbenzoic acid--CoA ligase	complement(664131..665240)	Mycobacterium ulcerans Agy99	4551805
YP_904778.1	CDS	MUL_0642	NC_008611.1	665285	665581	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; hypothetical protein	complement(665285..665581)	Mycobacterium ulcerans Agy99	4551806
YP_904779.1	CDS	MUL_0643	NC_008611.1	665641	665925	R	membrane protein; hypothetical protein	complement(665641..665925)	Mycobacterium ulcerans Agy99	4551807
YP_904780.1	CDS	MUL_0645	NC_008611.1	667315	667722	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(667315..667722)	Mycobacterium ulcerans Agy99	4551809
YP_904781.1	CDS	MUL_0646	NC_008611.1	667736	668365	R	cytoplasmic protein; hypothetical protein	complement(667736..668365)	Mycobacterium ulcerans Agy99	4551810
YP_904782.1	CDS	MUL_0647	NC_008611.1	668384	669271	R	Detected in the membrane fraction by proteomics. Also detected in the cytoplasmic fraction by 2D-LC-MS/MS.; cytoplasmic protein; short chain dehydrogenase	complement(668384..669271)	Mycobacterium ulcerans Agy99	4551811
YP_904783.1	CDS	menB	NC_008611.1	669315	670217	R	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase	complement(669315..670217)	Mycobacterium ulcerans Agy99	4551812
YP_904784.1	CDS	MUL_0649	NC_008611.1	670214	670549	R	cytoplasmic protein; hypothetical protein	complement(670214..670549)	Mycobacterium ulcerans Agy99	4551813
YP_904785.1	CDS	fadD8	NC_008611.1	671026	672627	R	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	complement(671026..672627)	Mycobacterium ulcerans Agy99	4551814
YP_904786.1	CDS	MUL_0651	NC_008611.1	672716	674320	D	membrane protein; has significant domain identity to predicted metal- dependent hydrolases; hypothetical protein	672716..674320	Mycobacterium ulcerans Agy99	4551815
YP_904787.1	CDS	menC	NC_008611.1	674317	675300	D	catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase	674317..675300	Mycobacterium ulcerans Agy99	4551816
YP_904788.1	CDS	bpoC	NC_008611.1	675293	676081	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; non-haem peroxidase; bromoperoxidase BpoC	675293..676081	Mycobacterium ulcerans Agy99	4551817
YP_904789.1	CDS	menD	NC_008611.1	676145	677791	D	SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase	676145..677791	Mycobacterium ulcerans Agy99	4551818
YP_904790.1	CDS	MUL_0655	NC_008611.1	677788	678312	D	membrane protein; hypothetical protein	677788..678312	Mycobacterium ulcerans Agy99	4551819
YP_904791.1	CDS	pimB	NC_008611.1	678388	679539	D	cytoplasmic protein; involved in lipoarabinomannan (lam) biosynthesis.; mannosyltransferase, PimB	678388..679539	Mycobacterium ulcerans Agy99	4551820
YP_904792.1	CDS	MUL_0657	NC_008611.1	679536	680138	R	cytoplasmic protein; function unknown, mar family; transcriptional regulator	complement(679536..680138)	Mycobacterium ulcerans Agy99	4551821
YP_904793.1	CDS	MUL_0658	NC_008611.1	680149	681342	D	cytoplasmic protein; hypothetical protein	680149..681342	Mycobacterium ulcerans Agy99	4551822
YP_904794.1	CDS	MUL_0659	NC_008611.1	681332	682639	D	cytoplasmic protein; hypothetical protein	681332..682639	Mycobacterium ulcerans Agy99	4551823
YP_904795.1	CDS	ubiE	NC_008611.1	682668	683363	D	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase	682668..683363	Mycobacterium ulcerans Agy99	4553382
YP_904796.1	CDS	MUL_0661	NC_008611.1	683382	683717	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; hypothetical protein	complement(683382..683717)	Mycobacterium ulcerans Agy99	4553383
YP_904797.1	CDS	MUL_0662	NC_008611.1	683707	684438	R	cytoplasmic protein; methyltransferase	complement(683707..684438)	Mycobacterium ulcerans Agy99	4553384
YP_904798.1	CDS	MUL_0663	NC_008611.1	684504	685742	R	membrane protein; has significant domain conservation with dehydrogenases (flavoproteins) [energy production and conversion]; FAD-linked oxidoreductase	complement(684504..685742)	Mycobacterium ulcerans Agy99	4553385
YP_904799.1	CDS	grcC1	NC_008611.1	685764	686771	D	cytoplasmic protein; supplies polyprenyl diphosphate; polyprenyl diphosphate synthetase, GrcC1	685764..686771	Mycobacterium ulcerans Agy99	4553386
YP_904800.1	CDS	hspX	NC_008611.1	686862	687722	D	putative metalloprotease; heat shock protein HtpX	686862..687722	Mycobacterium ulcerans Agy99	4553387
YP_904801.1	CDS	sulP	NC_008611.1	687743	689344	R	membrane protein; generates CO(2) and H(2)O from H(2)CO(3), and possibly involved in transport of sulfate across the membrane.; transmembrane carbonic anhydrase, SulP	complement(687743..689344)	Mycobacterium ulcerans Agy99	4553388
YP_904802.1	CDS	sulP_1	NC_008611.1	689637	691190	R	membrane protein; frameshift; transmembrane carbonic anhydrase, SulP	complement(689637..691190)	Mycobacterium ulcerans Agy99	4553389
YP_904803.1	CDS	gpdA1	NC_008611.1	691423	692448	R	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	complement(691423..692448)	Mycobacterium ulcerans Agy99	4553390
YP_904804.1	CDS	MUL_0668	NC_008611.1	692900	693595	D	membrane protein; hydrolyzes peptides and/or proteins. cleaves preferentially after serine residues; serine protease	692900..693595	Mycobacterium ulcerans Agy99	4553391
YP_904805.1	CDS	rimL	NC_008611.1	697302	697760	R	cytoplasmic protein; domain identity to N-acetylases of ribosomal proteins; acetyltransferase, RimL	complement(697302..697760)	Mycobacterium ulcerans Agy99	4553393
YP_904806.1	CDS	MUL_0671	NC_008611.1	697968	698459	R	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein	complement(697968..698459)	Mycobacterium ulcerans Agy99	4553394
YP_904807.1	CDS	MUL_0673	NC_008611.1	698652	700913	R	membrane protein; ABC-type transport system, involved in lipoprotein release, permease component; ABC transporter	complement(698652..700913)	Mycobacterium ulcerans Agy99	4553396
YP_904808.1	CDS	MUL_0674	NC_008611.1	701006	701740	R	membrane protein; ABC transporter ATP-binding protein	complement(701006..701740)	Mycobacterium ulcerans Agy99	4553397
YP_904809.1	CDS	MUL_0675	NC_008611.1	701737	702342	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulator	complement(701737..702342)	Mycobacterium ulcerans Agy99	4553398
YP_904810.1	CDS	MUL_0676	NC_008611.1	702465	703277	R	cytoplasmic protein; carveol-like dehydrogenase	complement(702465..703277)	Mycobacterium ulcerans Agy99	4553399
YP_904811.1	CDS	nhaP	NC_008611.1	703399	704619	R	membrane protein; NhaP-type Na+/H+ and K+/H+ antiporter: inorganic ion transport and metabolism] antiporters are ubiquitous membrane proteins that are involved in homeostasis of H(+) and na(+) throughout the biological kingdom.; ion antiporter, NhaP	complement(703399..704619)	Mycobacterium ulcerans Agy99	4553400
YP_904812.1	CDS	MUL_0678	NC_008611.1	704778	705824	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(704778..705824)	Mycobacterium ulcerans Agy99	4554462
YP_904813.1	CDS	MUL_0679	NC_008611.1	706434	706631	D	hypothetical protein	706434..706631	Mycobacterium ulcerans Agy99	4554463
YP_904814.1	CDS	MUL_0681	NC_008611.1	707984	708607	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	707984..708607	Mycobacterium ulcerans Agy99	4554465
YP_904815.1	CDS	MUL_0685	NC_008611.1	710901	711080	D	membrane protein; hypothetical protein	710901..711080	Mycobacterium ulcerans Agy99	4554469
YP_904816.1	CDS	MUL_0686	NC_008611.1	711204	712226	D	cytoplasmic protein; methyltransferase/methylase	711204..712226	Mycobacterium ulcerans Agy99	4554470
YP_904817.1	CDS	MUL_0687	NC_008611.1	712367	713098	D	cytoplasmic protein; adenylate cyclase	712367..713098	Mycobacterium ulcerans Agy99	4554471
YP_904818.1	CDS	gatA_1	NC_008611.1	715636	717156	D	cytoplasmic protein; component of the translational apparatus. furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. the reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-glu-tRNA(Gln) [catalytic activity: ATP + L-glutamyl-tRNA(Gln) + L- glutamine = ADP + phosphate + L-glutaminyl-tRNA(Gln) + L- glutamate]; peptide amidase, GatA	715636..717156	Mycobacterium ulcerans Agy99	4554473
YP_904819.1	CDS	MUL_0690	NC_008611.1	717353	717700	R	cytoplasmic protein; oxidoreductase	complement(717353..717700)	Mycobacterium ulcerans Agy99	4554474
YP_904820.1	CDS	galT	NC_008611.1	717732	718889	D	membrane protein; involved in galactose metabolism (Leloir pathway) [catalytic activity: UTP + alpha-D-galactose 1-phosphate = diphosphate + UDP-galactose]; galactose-1-phosphate uridylyltransferase	717732..718889	Mycobacterium ulcerans Agy99	4554475
YP_904821.1	CDS	galK	NC_008611.1	718886	719986	D	catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase	718886..719986	Mycobacterium ulcerans Agy99	4554476
YP_904822.1	CDS	MUL_0693	NC_008611.1	719983	721089	D	membrane protein; ArsR family; transcriptional regulator	719983..721089	Mycobacterium ulcerans Agy99	4554477
YP_904823.1	CDS	MUL_0695	NC_008611.1	724517	725329	D	cytoplasmic protein; hypothetical protein	724517..725329	Mycobacterium ulcerans Agy99	4553823
YP_904824.1	CDS	MUL_0698	NC_008611.1	728621	730093	R	membrane protein; contains hydrolase domain; hypothetical protein	complement(728621..730093)	Mycobacterium ulcerans Agy99	4553826
YP_904825.1	CDS	MUL_0699	NC_008611.1	730021	730602	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(730021..730602)	Mycobacterium ulcerans Agy99	4553827
YP_904826.1	CDS	lppF	NC_008611.1	730716	732011	R	membrane protein; lipoprotein LppF	complement(730716..732011)	Mycobacterium ulcerans Agy99	4553828
YP_904827.1	CDS	lpqN	NC_008611.1	732215	732895	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipoprotein LpqN	complement(732215..732895)	Mycobacterium ulcerans Agy99	4553829
YP_904828.1	CDS	MUL_0702	NC_008611.1	732899	733135	D	hypothetical protein	732899..733135	Mycobacterium ulcerans Agy99	4553830
YP_904829.1	CDS	MUL_0704	NC_008611.1	735808	738183	R	Also detected in the cytoplamic fraction by LCMSMS; membrane protein; integral membrane protein	complement(735808..738183)	Mycobacterium ulcerans Agy99	4553832
YP_904830.1	CDS	MUL_0705	NC_008611.1	738681	739943	R	cytoplasmic protein; function unknown, imidazolonepropionase is an amidohydrolase; imidazolonepropionase	complement(738681..739943)	Mycobacterium ulcerans Agy99	4553833
YP_904831.1	CDS	MUL_0706	NC_008611.1	740075	741016	D	cytoplasmic protein; hypothetical protein	740075..741016	Mycobacterium ulcerans Agy99	4553834
YP_904832.1	CDS	recD	NC_008611.1	741037	742800	R	cytoplasmic protein; involved in homologous recombination; exodeoxyribonuclease V (alpha chain), RecD	complement(741037..742800)	Mycobacterium ulcerans Agy99	4553835
YP_904833.1	CDS	recB	NC_008611.1	742797	746129	R	cytoplasmic protein; involved in homologous recombination.; exodeoxyribonuclease V (beta chain), RecB	complement(742797..746129)	Mycobacterium ulcerans Agy99	4553836
YP_904834.1	CDS	recC	NC_008611.1	746129	749428	R	cytoplasmic protein; involved in homologous recombination; exodeoxyribonuclease V (gamma chain), RecC	complement(746129..749428)	Mycobacterium ulcerans Agy99	4553837
YP_904835.1	CDS	MUL_0710	NC_008611.1	749470	749919	D	membrane protein; nitroreductase	749470..749919	Mycobacterium ulcerans Agy99	4553838
YP_904836.1	CDS	cynS	NC_008611.1	750066	750542	D	catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase	750066..750542	Mycobacterium ulcerans Agy99	4553839
YP_904837.1	CDS	echA3	NC_008611.1	751598	752293	R	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(751598..752293)	Mycobacterium ulcerans Agy99	4552571
YP_904838.1	CDS	MUL_0714	NC_008611.1	752375	753247	R	membrane protein; hypothetical protein	complement(752375..753247)	Mycobacterium ulcerans Agy99	4552572
YP_904839.1	CDS	gloB	NC_008611.1	753399	754115	R	Detected in the cytoplasmic fraction by proteomics.; cytoplasmic protein; thought to be involved in glyoxal pathway. thioesterase that catalyses the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid [catalytic activity: (S)-(2-hydroxyacyl)glutathione + H2O = glutathione + a 2-hydroxy acid anion]; glyoxalase II, GloB	complement(753399..754115)	Mycobacterium ulcerans Agy99	4552573
YP_904840.1	CDS	MUL_0716	NC_008611.1	754239	754448	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; domain homology to Arc/MetJ class transcription regulators; hypothetical protein	754239..754448	Mycobacterium ulcerans Agy99	4552574
YP_904841.1	CDS	rpmG	NC_008611.1	754836	755003	D	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33	754836..755003	Mycobacterium ulcerans Agy99	4552577
YP_904842.1	CDS	MUL_0720	NC_008611.1	755054	755533	D	functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadA	755054..755533	Mycobacterium ulcerans Agy99	4552578
YP_904843.1	CDS	MUL_0721	NC_008611.1	755520	755948	D	functions as a heterodimer along with HadA or HadC in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadB	755520..755948	Mycobacterium ulcerans Agy99	4552579
YP_904844.1	CDS	MUL_0722	NC_008611.1	755959	756459	D	functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadC	755959..756459	Mycobacterium ulcerans Agy99	4552580
YP_904845.1	CDS	secE	NC_008611.1	756828	757316	D	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE	756828..757316	Mycobacterium ulcerans Agy99	4552582
YP_904846.1	CDS	nusG	NC_008611.1	757348	758061	D	Modulates Rho-dependent transcription termination; transcription antitermination protein NusG	757348..758061	Mycobacterium ulcerans Agy99	4552583
YP_904847.1	CDS	rplK	NC_008611.1	758108	758536	D	binds directly to 23S ribosomal RNA; 50S ribosomal protein L11	758108..758536	Mycobacterium ulcerans Agy99	4552584
YP_904848.1	CDS	rplA	NC_008611.1	758624	759331	D	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1	758624..759331	Mycobacterium ulcerans Agy99	4552585
YP_904849.1	CDS	mmaA4	NC_008611.1	761462	762400	R	Detected in the cytoplamic fraction by LC-MS/MS. Detected in the membrane fraction by proteomics (2D-LC- MS/MS); cytoplasmic protein; methyltransferase. involved in mycolic acids modification. catalyzes unusual S-adenosyl-methionine- dependent transformation of a cis-olefin mycolic acid into a secondary alcohol. catalyzes introduction of a hydroxyl group at the distal position on mycolic acid chains to produce the hydroxyl mycolate. mycolic acids represent a major constituent of the mycobacterial cell wall complex. methyl transfer results in formation of a secondary hydroxy group with an adjacent methyl branch; olefinic mycolic acid methyl transferase.; methoxy mycolic acid synthase 4, MmaA4	complement(761462..762400)	Mycobacterium ulcerans Agy99	4552128
YP_904850.1	CDS	mmaA3	NC_008611.1	762504	763385	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; methyltransferase involved in mycolic acid biosynthesis; methoxy mycolic acid synthase 3, MmaA3	complement(762504..763385)	Mycobacterium ulcerans Agy99	4552129
YP_904851.1	CDS	mmaA2	NC_008611.1	763669	764385	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; methyltransferase involved in mycolic acid biosynthesis; methoxy mycolic acid synthase 2, MmaA2	complement(763669..764385)	Mycobacterium ulcerans Agy99	4552130
YP_904852.1	CDS	lipG1	NC_008611.1	765500	766444	R	membrane protein; lipase/esterase	complement(765500..766444)	Mycobacterium ulcerans Agy99	4552132
YP_904853.1	CDS	MUL_0734	NC_008611.1	766454	767869	R	cytoplasmic protein; contains a kinase domain and ATP-binding cassette; hypothetical protein	complement(766454..767869)	Mycobacterium ulcerans Agy99	4552133
YP_904854.1	CDS	lipG2	NC_008611.1	767959	768870	R	cytoplasmic protein; lipase/esterase	complement(767959..768870)	Mycobacterium ulcerans Agy99	4552134
YP_904855.1	CDS	MUL_0737	NC_008611.1	770468	774556	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; alpha-mannosidase activity: hydrolysis of terminal non-reducing alpha-D-mannose residues in alpha-D- mannosides.; alpha-mannosidase	770468..774556	Mycobacterium ulcerans Agy99	4552136
YP_904856.1	CDS	fabD2	NC_008611.1	774578	775039	D	cytoplasmic protein; nvolved in lipid metabolism; fatty acid biosynthesis [catalytic activity: malonyl-CoA + [acyl- carrier protein] = CoA + malonyl-[acyl-carrier protein]]; malonyl CoA-acyl carrier protein transacylase, FabD2	774578..775039	Mycobacterium ulcerans Agy99	4552137
YP_904857.1	CDS	MUL_0739	NC_008611.1	775046	775954	D	function unknown; probably involved in specific sugar metabolism or regulation; carbohydrate kinase	775046..775954	Mycobacterium ulcerans Agy99	4552138
YP_904858.1	CDS	MUL_0740	NC_008611.1	776374	778350	D	membrane protein; PE-PGRS family protein	776374..778350	Mycobacterium ulcerans Agy99	4552139
YP_904859.1	CDS	rplJ	NC_008611.1	778725	779345	D	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10	778725..779345	Mycobacterium ulcerans Agy99	4552140
YP_904860.1	CDS	rplL	NC_008611.1	779413	779805	D	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12	779413..779805	Mycobacterium ulcerans Agy99	4552141
YP_904861.1	CDS	MUL_0743	NC_008611.1	779869	780606	R	cytoplasmic protein; function unknown, involved in transcriptional mechanism; transcriptional regulatory protein	complement(779869..780606)	Mycobacterium ulcerans Agy99	4552142
YP_904862.1	CDS	MUL_0744	NC_008611.1	780678	782180	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; dioxygenase and related enzymes [secondary metabolites biosynthesis, transport, and catabolism]; dioxygenase	780678..782180	Mycobacterium ulcerans Agy99	4552143
YP_904863.1	CDS	mkl	NC_008611.1	782359	783345	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS) Also detected in the cytoplasmic fraction by 2D- LC-MS/MS.; membrane protein; thought to be involved in active transport of ribonucleotide across the membrane. responsible for energy coupling to the transport system.; ribonucleotide-transport ATP-binding protein ABC transporter, Mkl	782359..783345	Mycobacterium ulcerans Agy99	4552144
YP_904864.1	CDS	rpoB	NC_008611.1	783938	787468	D	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta	783938..787468	Mycobacterium ulcerans Agy99	4552145
YP_904865.1	CDS	rpoC	NC_008611.1	787521	791471	D	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta'	787521..791471	Mycobacterium ulcerans Agy99	4552035
YP_904866.1	CDS	MUL_0748	NC_008611.1	792135	792326	D	membrane protein; PE-PGRS family protein	792135..792326	Mycobacterium ulcerans Agy99	4552036
YP_904867.1	CDS	end	NC_008611.1	795440	796198	D	Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV	795440..796198	Mycobacterium ulcerans Agy99	4552039
YP_904868.1	CDS	lpqP	NC_008611.1	796263	796919	D	membrane protein; lipoprotein LpqP	796263..796919	Mycobacterium ulcerans Agy99	4552040
YP_904869.1	CDS	MUL_0753	NC_008611.1	797119	798780	D	cytoplasmic protein; may be involved in lipid degradation; acyl-CoA dehydrogenase	797119..798780	Mycobacterium ulcerans Agy99	4552041
YP_904870.1	CDS	echA4	NC_008611.1	798789	799727	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	798789..799727	Mycobacterium ulcerans Agy99	4552042
YP_904871.1	CDS	MUL_0755	NC_008611.1	799741	800472	D	membrane protein; high domain identity with transcriptional repressors; putative regulatory protein	799741..800472	Mycobacterium ulcerans Agy99	4552043
YP_904872.1	CDS	echA5	NC_008611.1	800469	801242	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	800469..801242	Mycobacterium ulcerans Agy99	4552044
YP_904873.1	CDS	mmpL5	NC_008611.1	801299	804199	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; thought to be involved in fatty acid transport; transmembrane transport protein MmpL	complement(801299..804199)	Mycobacterium ulcerans Agy99	4552045
YP_904874.1	CDS	mmpS5	NC_008611.1	804196	804624	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane proteinm, MmpS5	complement(804196..804624)	Mycobacterium ulcerans Agy99	4552046
YP_904875.1	CDS	MUL_0759	NC_008611.1	804808	805308	D	cytoplasmic protein; transcriptional regulator	804808..805308	Mycobacterium ulcerans Agy99	4552047
YP_904876.1	CDS	MUL_0760	NC_008611.1	805358	805747	R	membrane protein; hypothetical protein	complement(805358..805747)	Mycobacterium ulcerans Agy99	4552048
YP_904877.1	CDS	MUL_0761	NC_008611.1	805885	806262	R	membrane protein; hypothetical protein	complement(805885..806262)	Mycobacterium ulcerans Agy99	4552049
YP_904878.1	CDS	MUL_0762	NC_008611.1	806526	807173	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	806526..807173	Mycobacterium ulcerans Agy99	4552050
YP_904879.1	CDS	rpsL	NC_008611.1	807549	807923	D	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12	807549..807923	Mycobacterium ulcerans Agy99	4552051
YP_904880.1	CDS	rpsG	NC_008611.1	807923	808393	D	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7	807923..808393	Mycobacterium ulcerans Agy99	4552052
YP_904881.1	CDS	fusA1	NC_008611.1	808474	810579	D	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G	808474..810579	Mycobacterium ulcerans Agy99	4552053
YP_904882.1	CDS	tuf	NC_008611.1	810766	811956	D	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	810766..811956	Mycobacterium ulcerans Agy99	4551894
YP_904883.1	CDS	MUL_0767	NC_008611.1	812206	813015	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	812206..813015	Mycobacterium ulcerans Agy99	4551895
YP_904884.1	CDS	MUL_0768	NC_008611.1	813228	813974	D	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	813228..813974	Mycobacterium ulcerans Agy99	4551896
YP_904885.1	CDS	MUL_0769	NC_008611.1	813984	815414	D	cytoplasmic protein; ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.; ferredoxin reductase	813984..815414	Mycobacterium ulcerans Agy99	4551897
YP_904886.1	CDS	MUL_0770	NC_008611.1	815320	816381	R	cytoplasmic protein; hypothetical protein	complement(815320..816381)	Mycobacterium ulcerans Agy99	4551898
YP_904887.1	CDS	MUL_0771	NC_008611.1	816381	816974	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulator	complement(816381..816974)	Mycobacterium ulcerans Agy99	4551899
YP_904888.1	CDS	MUL_0772	NC_008611.1	817173	817502	D	hypothetical protein	817173..817502	Mycobacterium ulcerans Agy99	4551900
YP_904889.1	CDS	pqqE	NC_008611.1	817499	818608	D	cytoplasmic protein; required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.; coenzyme PQQ synthesis protein E, PqqE	817499..818608	Mycobacterium ulcerans Agy99	4551901
YP_904890.1	CDS	lldD1	NC_008611.1	818679	819851	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in respiration; catalyzes conversion of lactate into pyruvate [catalytic activity: (S)-lactate + 2 ferricytochrome C = pyruvate + 2 ferrocytochrome C]; L-lactate dehydrogenase (cytochrome) LldD1	818679..819851	Mycobacterium ulcerans Agy99	4551902
YP_904891.1	CDS	MUL_0775	NC_008611.1	820006	820758	D	cytoplasmic protein; catalyses the hydrolysis of creatinine to creatine; creatinine amidohydrolase	820006..820758	Mycobacterium ulcerans Agy99	4551903
YP_904892.1	CDS	MUL_0776	NC_008611.1	820755	822167	D	membrane protein; membrane glycosyl transferase	820755..822167	Mycobacterium ulcerans Agy99	4551904
YP_904893.1	CDS	MUL_0777	NC_008611.1	822176	823612	D	membrane protein; dehydrogenase	822176..823612	Mycobacterium ulcerans Agy99	4551905
YP_904894.1	CDS	MUL_0778	NC_008611.1	823602	824255	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(823602..824255)	Mycobacterium ulcerans Agy99	4551906
YP_904895.1	CDS	MUL_0780	NC_008611.1	826603	827946	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(826603..827946)	Mycobacterium ulcerans Agy99	4551908
YP_904896.1	CDS	MUL_0781	NC_008611.1	828377	829381	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	828377..829381	Mycobacterium ulcerans Agy99	4551909
YP_904897.1	CDS	MUL_0782	NC_008611.1	829924	831396	D	cytoplasmic protein; C-term truncated by IS2606 insertion; PPE family protein	829924..831396	Mycobacterium ulcerans Agy99	4551910
YP_904898.1	CDS	MUL_0784	NC_008611.1	832513	832830	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(832513..832830)	Mycobacterium ulcerans Agy99	4551528
YP_904899.1	CDS	MUL_0785	NC_008611.1	832855	833559	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(832855..833559)	Mycobacterium ulcerans Agy99	4551529
YP_904900.1	CDS	MUL_0787	NC_008611.1	834619	835986	D	membrane protein; lipase	834619..835986	Mycobacterium ulcerans Agy99	4551531
YP_904901.1	CDS	MUL_0788	NC_008611.1	835919	836239	D	cytoplasmic protein; hypothetical protein	835919..836239	Mycobacterium ulcerans Agy99	4551532
YP_904902.1	CDS	rpsJ	NC_008611.1	836530	836835	D	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10	836530..836835	Mycobacterium ulcerans Agy99	4551533
YP_904903.1	CDS	rplC	NC_008611.1	836850	837503	D	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3	836850..837503	Mycobacterium ulcerans Agy99	4551534
YP_904904.1	CDS	rplD	NC_008611.1	837503	838177	D	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4	837503..838177	Mycobacterium ulcerans Agy99	4551535
YP_904905.1	CDS	rplW	NC_008611.1	838177	838479	D	binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23	838177..838479	Mycobacterium ulcerans Agy99	4551536
YP_904906.1	CDS	rplB	NC_008611.1	838509	839351	D	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2	838509..839351	Mycobacterium ulcerans Agy99	4551537
YP_904907.1	CDS	rpsS	NC_008611.1	839373	839654	D	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19	839373..839654	Mycobacterium ulcerans Agy99	4551538
YP_904908.1	CDS	rplV	NC_008611.1	839683	840213	D	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22	839683..840213	Mycobacterium ulcerans Agy99	4551539
YP_904909.1	CDS	rpsC	NC_008611.1	840213	841040	D	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3	840213..841040	Mycobacterium ulcerans Agy99	4551540
YP_904910.1	CDS	rplP	NC_008611.1	841044	841460	D	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16	841044..841460	Mycobacterium ulcerans Agy99	4551541
YP_904911.1	CDS	rpmC	NC_008611.1	841460	841702	D	one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29	841460..841702	Mycobacterium ulcerans Agy99	4551542
YP_904912.1	CDS	rpsQ	NC_008611.1	841699	842061	D	primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17	841699..842061	Mycobacterium ulcerans Agy99	4551543
YP_904913.1	CDS	MUL_0801	NC_008611.1	844636	845247	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	844636..845247	Mycobacterium ulcerans Agy99	4551338
YP_904914.1	CDS	MUL_0803	NC_008611.1	846265	847203	D	membrane protein; transmembrane protein	846265..847203	Mycobacterium ulcerans Agy99	4551340
YP_904915.1	CDS	rplN	NC_008611.1	847454	847822	D	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14	847454..847822	Mycobacterium ulcerans Agy99	4551341
YP_904916.1	CDS	rplX	NC_008611.1	847823	848146	D	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24	847823..848146	Mycobacterium ulcerans Agy99	4551342
YP_904917.1	CDS	rplE	NC_008611.1	848143	848715	D	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5	848143..848715	Mycobacterium ulcerans Agy99	4551343
YP_904918.1	CDS	rpsN	NC_008611.1	848720	848905	D	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14	848720..848905	Mycobacterium ulcerans Agy99	4551344
YP_904919.1	CDS	rpsH	NC_008611.1	848982	849380	D	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8	848982..849380	Mycobacterium ulcerans Agy99	4551345
YP_904920.1	CDS	rplF	NC_008611.1	849391	849930	D	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6	849391..849930	Mycobacterium ulcerans Agy99	4551346
YP_904921.1	CDS	rplR	NC_008611.1	849972	850340	D	cytoplasmic protein; this is one of 3 proteins that mediate the attachment of the 5S RNA into the large ribosomal subunit.; 50S ribosomal protein L18	849972..850340	Mycobacterium ulcerans Agy99	4551347
YP_904922.1	CDS	rpsE	NC_008611.1	850378	851052	D	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5	850378..851052	Mycobacterium ulcerans Agy99	4551348
YP_904923.1	CDS	rpmD	NC_008611.1	851049	851267	D	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30	851049..851267	Mycobacterium ulcerans Agy99	4551349
YP_904924.1	CDS	rplO	NC_008611.1	851264	851704	D	late assembly protein; 50S ribosomal protein L15	851264..851704	Mycobacterium ulcerans Agy99	4551350
YP_904925.1	CDS	MUL_0814	NC_008611.1	851772	852698	R	cytoplasmic protein; flavin-dependent oxidoreductase	complement(851772..852698)	Mycobacterium ulcerans Agy99	4551351
YP_904926.1	CDS	ssp	NC_008611.1	852785	854587	D	membrane protein; involved in digestion of the cleaved signal peptides. this activity is necessary to maintain proper secretion of mature proteins across the membrane.; protease IV, Ssp	852785..854587	Mycobacterium ulcerans Agy99	4551352
YP_904927.1	CDS	MUL_0816	NC_008611.1	854584	855498	R	cytoplasmic protein; O-methyltransferase	complement(854584..855498)	Mycobacterium ulcerans Agy99	4551353
YP_904928.1	CDS	MUL_0817	NC_008611.1	855518	856420	R	cytoplasmic protein; O-methyltransferase	complement(855518..856420)	Mycobacterium ulcerans Agy99	4551354
YP_904929.1	CDS	MUL_0818	NC_008611.1	856417	857391	R	cytoplasmic protein; O-methyltransferase	complement(856417..857391)	Mycobacterium ulcerans Agy99	4551355
YP_904930.1	CDS	adh_1	NC_008611.1	857608	859623	D	membrane protein; function unknown, may contain two dehyrogenase domains, first showing better similarity; short-chain dehydrogenase	857608..859623	Mycobacterium ulcerans Agy99	4551356
YP_904931.1	CDS	MUL_0820	NC_008611.1	859632	860312	R	cytoplasmic protein; methyltransferase	complement(859632..860312)	Mycobacterium ulcerans Agy99	4551357
YP_904932.1	CDS	MUL_0821	NC_008611.1	860368	861246	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	860368..861246	Mycobacterium ulcerans Agy99	4550173
YP_904933.1	CDS	fucA	NC_008611.1	861270	861926	R	catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose phosphate aldolase	complement(861270..861926)	Mycobacterium ulcerans Agy99	4550174
YP_904934.1	CDS	serA2	NC_008611.1	861923	862912	R	cytoplasmic protein; involved at the first committed step in the 'phosphorylated' pathway of L-serine biosynthesis. catalyzes the oxidation of D-3-phosphoglycerate to 3- phosphohydroxypyruvate [catalytic activity: 3- phosphoglycerate + NAD(+) = 3-phosphohydroxypyruvate + NADH]; D-3-phosphoglycerate dehydrogenase	complement(861923..862912)	Mycobacterium ulcerans Agy99	4550175
YP_904935.1	CDS	xylB	NC_008611.1	862943	864178	D	membrane protein; phosphorylates D-xylulose [catalytic activity: ATP + D-xylulose = ADP + D-xylulose 5-phosphate]; D-xylulose-kinase (xylulokinase), XylB	862943..864178	Mycobacterium ulcerans Agy99	4550176
YP_904936.1	CDS	MUL_0825	NC_008611.1	864386	865114	D	Detected in the cytoplasmic and membrane fractions by LC-MS/MS. Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; hypothetical protein	864386..865114	Mycobacterium ulcerans Agy99	4550177
YP_904937.1	CDS	secY	NC_008611.1	867306	868631	D	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY	867306..868631	Mycobacterium ulcerans Agy99	4550180
YP_904938.1	CDS	adk	NC_008611.1	868628	869173	D	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase	868628..869173	Mycobacterium ulcerans Agy99	4550181
YP_904939.1	CDS	mapA	NC_008611.1	869176	869976	D	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase	869176..869976	Mycobacterium ulcerans Agy99	4550182
YP_904940.1	CDS	sigL	NC_008611.1	870029	870562	D	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein regulates polyketide synthases and secreted or membrane proteins; RNA polymerase sigma factor SigL	870029..870562	Mycobacterium ulcerans Agy99	4550183
YP_904941.1	CDS	MUL_0832	NC_008611.1	870641	871387	D	membrane protein; function unknown, domain identity suggests possible role in transcription regulation; hypothetical protein	870641..871387	Mycobacterium ulcerans Agy99	4550184
YP_904942.1	CDS	MUL_0833	NC_008611.1	871474	871974	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulator	871474..871974	Mycobacterium ulcerans Agy99	4550185
YP_904943.1	CDS	MUL_0834	NC_008611.1	871998	872546	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	871998..872546	Mycobacterium ulcerans Agy99	4550186
YP_904944.1	CDS	mmsB	NC_008611.1	872559	873443	R	membrane protein; catalyzes the NAD-dependent, reversible oxidation of 3-hydroxbutyrate to methylmalonate [catalytic activity: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3- oxopropanoate + NADH]; 3-hydroxyisobutyrate dehydrogenase	complement(872559..873443)	Mycobacterium ulcerans Agy99	4550187
YP_904945.1	CDS	fadE9	NC_008611.1	873456	874628	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipid metabolism; acyl-CoA dehydrogenase, FadE9	complement(873456..874628)	Mycobacterium ulcerans Agy99	4550188
YP_904946.1	CDS	mmsA	NC_008611.1	874634	876154	R	Detected in the cytoplamic fraction by LCMSMS. Also detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; plays a role in valine and pyrimidine metabolism. binds fatty acyl-CoA [catalytic activity: 2-methyl-3- oxopropanoate + CoA + NAD+ = propanoyl-CoA + CO2 + NADH]; methylmalonate semialdehyde dehydrogenase, MmsA	complement(874634..876154)	Mycobacterium ulcerans Agy99	4550189
YP_904947.1	CDS	MUL_0838	NC_008611.1	876334	877914	R	membrane protein; transmembrane carbohydrate transport protein	complement(876334..877914)	Mycobacterium ulcerans Agy99	4550190
YP_904948.1	CDS	rmlC	NC_008611.1	878058	878663	R	cytoplasmic protein; involved in dTDP-L-rhamnose biosynthesis, within the O antigen biosynthesis pathway of lipopolysaccharide biosynthesis: conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-4-keto-rhamnose [catalytic activity: dTDP-4- dehydro-6-deoxy-D-glucose = dTDP-4-dehydro-6-deoxy-L- mannose]; dTDP-4-dehydrorhamnose 3,5-epimerase, RmlC	complement(878058..878663)	Mycobacterium ulcerans Agy99	4550191
YP_904949.1	CDS	rmlB	NC_008611.1	878665	879660	R	cytoplasmic protein; involved in dTDP-L-rhamnose biosynthesis [catalytic activity: dTDP-glucose = DTDP-4-dehydro-6-deoxy-D-glucose + H(2)O]; dTDP-glucose-4,6-dehydratase, RmlB	complement(878665..879660)	Mycobacterium ulcerans Agy99	4553550
YP_904950.1	CDS	MUL_0841	NC_008611.1	879670	880530	R	cytoplasmic protein; hypothetical protein	complement(879670..880530)	Mycobacterium ulcerans Agy99	4553551
YP_904951.1	CDS	MUL_0842	NC_008611.1	880557	881453	R	cytoplasmic protein; hypothetical protein	complement(880557..881453)	Mycobacterium ulcerans Agy99	4553552
YP_904952.1	CDS	infA	NC_008611.1	881701	881922	D	stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1	881701..881922	Mycobacterium ulcerans Agy99	4553553
YP_904953.1	CDS	rpmJ	NC_008611.1	881956	882069	D	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36	881956..882069	Mycobacterium ulcerans Agy99	4553554
YP_904954.1	CDS	rpsM	NC_008611.1	882260	882634	D	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13	882260..882634	Mycobacterium ulcerans Agy99	4553555
YP_904955.1	CDS	rpsK	NC_008611.1	882638	883054	D	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11	882638..883054	Mycobacterium ulcerans Agy99	4553556
YP_904956.1	CDS	rpsD	NC_008611.1	883073	883678	D	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4	883073..883678	Mycobacterium ulcerans Agy99	4553557
YP_904957.1	CDS	rpoA	NC_008611.1	883764	884807	D	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha	883764..884807	Mycobacterium ulcerans Agy99	4553558
YP_904958.1	CDS	rplQ	NC_008611.1	884868	885437	D	is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17	884868..885437	Mycobacterium ulcerans Agy99	4553559
YP_904959.1	CDS	truA	NC_008611.1	885499	886281	D	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A	885499..886281	Mycobacterium ulcerans Agy99	4553560
YP_904960.1	CDS	cycA	NC_008611.1	886297	887787	R	membrane protein; permease that is involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; D-serine/D-alanine/glycine transporter, CycA	complement(886297..887787)	Mycobacterium ulcerans Agy99	4553561
YP_904961.1	CDS	MUL_5078	NC_008611.1	888055	889197	R	membrane protein; PPE family protein	complement(888055..889197)	Mycobacterium ulcerans Agy99	4553562
YP_904962.1	CDS	cut4	NC_008611.1	892507	893202	R	membrane protein; hydrolysis of cutin (a polyester that forms the structure of plant cuticle); cutinase	complement(892507..893202)	Mycobacterium ulcerans Agy99	4553565
YP_904963.1	CDS	cut3	NC_008611.1	893234	894037	R	membrane protein; cutinase	complement(893234..894037)	Mycobacterium ulcerans Agy99	4553566
YP_904964.1	CDS	MUL_0857	NC_008611.1	894150	895658	D	membrane protein; hypothetical protein	894150..895658	Mycobacterium ulcerans Agy99	4553567
YP_904965.1	CDS	mycP4	NC_008611.1	895548	896921	R	membrane protein; membrane-anchored serine protease (mycosin), MycP4	complement(895548..896921)	Mycobacterium ulcerans Agy99	4553568
YP_904966.1	CDS	MUL_0859	NC_008611.1	896918	898300	R	membrane protein; hypothetical protein	complement(896918..898300)	Mycobacterium ulcerans Agy99	4553765
YP_904967.1	CDS	MUL_0860	NC_008611.1	898415	902095	D	membrane protein; function unknown but has 3 ATP binding P-loop motifs; hypothetical protein	898415..902095	Mycobacterium ulcerans Agy99	4553766
YP_904968.1	CDS	MUL_0861	NC_008611.1	902092	903336	D	membrane protein; hypothetical protein	902092..903336	Mycobacterium ulcerans Agy99	4553767
YP_904969.1	CDS	esxU	NC_008611.1	903399	903752	D	secreted protein; EsaT-6 like protein, EsxU	903399..903752	Mycobacterium ulcerans Agy99	4553768
YP_904970.1	CDS	esxT	NC_008611.1	903768	904064	D	secreted protein; EsaT-6 like protein, EsxT	903768..904064	Mycobacterium ulcerans Agy99	4553769
YP_904971.1	CDS	rplM	NC_008611.1	904303	904746	D	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13	904303..904746	Mycobacterium ulcerans Agy99	4553770
YP_904972.1	CDS	rpsI	NC_008611.1	904743	905201	D	forms a direct contact with the tRNA during translation; 30S ribosomal protein S9	904743..905201	Mycobacterium ulcerans Agy99	4553771
YP_904973.1	CDS	glmM	NC_008611.1	905352	906689	D	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase	905352..906689	Mycobacterium ulcerans Agy99	4553772
YP_904974.1	CDS	MUL_0867	NC_008611.1	906794	907105	D	cytoplasmic protein; hypothetical protein	906794..907105	Mycobacterium ulcerans Agy99	4553773
YP_904975.1	CDS	MUL_0868	NC_008611.1	907108	908505	D	cytoplasmic protein; hypothetical protein	907108..908505	Mycobacterium ulcerans Agy99	4553774
YP_904976.1	CDS	MUL_0870	NC_008611.1	909590	910429	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; hydrolase domain identity; hypothetical protein	complement(909590..910429)	Mycobacterium ulcerans Agy99	4553776
YP_904977.1	CDS	glmS	NC_008611.1	911022	912899	D	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase	911022..912899	Mycobacterium ulcerans Agy99	4553778
YP_904978.1	CDS	MUL_0874	NC_008611.1	913561	914607	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(913561..914607)	Mycobacterium ulcerans Agy99	4553780
YP_904979.1	CDS	MUL_0876	NC_008611.1	915234	915947	D	hypothetical protein	915234..915947	Mycobacterium ulcerans Agy99	4553781
YP_904980.1	CDS	MUL_0877	NC_008611.1	915978	917399	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; has domain identity with YjeF-related protein N- terminus and sugar kinases c-terminus; transmembrane protein	915978..917399	Mycobacterium ulcerans Agy99	4553782
YP_904981.1	CDS	gadB	NC_008611.1	917436	918821	D	cytoplasmic protein; catalyzes the production of GabA [catalytic activity: L-glutamate = 4-aminobutanoate + CO(2)]; glutamate decarboxylase	917436..918821	Mycobacterium ulcerans Agy99	4553783
YP_904982.1	CDS	alr	NC_008611.1	918908	920074	D	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase	918908..920074	Mycobacterium ulcerans Agy99	4550853
YP_904983.1	CDS	MUL_0880	NC_008611.1	920064	921185	D	secreted protein; hydrolase	920064..921185	Mycobacterium ulcerans Agy99	4550854
YP_904984.1	CDS	MUL_0881	NC_008611.1	921178	921648	D	cytoplasmic protein; ATPase domain; hypothetical protein	921178..921648	Mycobacterium ulcerans Agy99	4550855
YP_904985.1	CDS	MUL_0882	NC_008611.1	921645	922271	D	membrane protein; peptidase; hypothetical protein	921645..922271	Mycobacterium ulcerans Agy99	4550856
YP_904986.1	CDS	rimI	NC_008611.1	922268	922744	D	cytoplasmic protein; this enzyme acetylates the N-terminal alanine of ribosomal protein S18 [catalytic activity: acetyl-CoA + ribosomal-protein L-alanine = CoA + ribosomal-protein N- acetyl-L-alanine]; ribosomal-protein-alanine acetyltransferase, RimI	922268..922744	Mycobacterium ulcerans Agy99	4550857
YP_904987.1	CDS	gcp	NC_008611.1	922745	923776	D	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease	922745..923776	Mycobacterium ulcerans Agy99	4550858
YP_904988.1	CDS	groES	NC_008611.1	924090	924392	D	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES	924090..924392	Mycobacterium ulcerans Agy99	4550859
YP_904989.1	CDS	groEL	NC_008611.1	924485	926104	D	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL	924485..926104	Mycobacterium ulcerans Agy99	4550860
YP_904990.1	CDS	MUL_0888	NC_008611.1	927247	928293	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(927247..928293)	Mycobacterium ulcerans Agy99	4550862
YP_904991.1	CDS	MUL_0889	NC_008611.1	928988	929425	R	cytoplasmic protein; hypothetical protein	complement(928988..929425)	Mycobacterium ulcerans Agy99	4550863
YP_904992.1	CDS	MUL_0890	NC_008611.1	929692	931407	R	membrane protein; PPE family protein	complement(929692..931407)	Mycobacterium ulcerans Agy99	4550864
YP_904993.1	CDS	MUL_0891	NC_008611.1	931450	931977	D	cytoplasmic protein; hypothetical protein	931450..931977	Mycobacterium ulcerans Agy99	4550865
YP_904994.1	CDS	MUL_0894	NC_008611.1	933955	935610	D	cytoplasmic protein; metal-dependent hydrolase	933955..935610	Mycobacterium ulcerans Agy99	4550867
YP_904995.1	CDS	whiB3	NC_008611.1	935655	935963	R	cytoplasmic protein; involved in transcriptional mechanism (growth phase- dependent); Whib-like regulatory protein, WhiB3	complement(935655..935963)	Mycobacterium ulcerans Agy99	4550868
YP_904996.1	CDS	MUL_0896	NC_008611.1	936474	937520	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	936474..937520	Mycobacterium ulcerans Agy99	4550869
YP_904997.1	CDS	sigD	NC_008611.1	937567	938160	D	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this protein is involved in expression of ribosome-associated gene products in stationary phase; RNA polymerase sigma factor SigD	937567..938160	Mycobacterium ulcerans Agy99	4550780
YP_904998.1	CDS	MUL_0898	NC_008611.1	938153	939199	D	cytoplasmic protein; hypothetical protein	938153..939199	Mycobacterium ulcerans Agy99	4550781
YP_904999.1	CDS	MUL_0899	NC_008611.1	939260	939673	R	cytoplasmic protein; hypothetical protein	complement(939260..939673)	Mycobacterium ulcerans Agy99	4550782
YP_905000.1	CDS	guaB2	NC_008611.1	939837	941435	D	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase	939837..941435	Mycobacterium ulcerans Agy99	4550783
YP_905001.1	CDS	guaB3	NC_008611.1	941445	942572	D	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase	941445..942572	Mycobacterium ulcerans Agy99	4550784
YP_905002.1	CDS	MUL_0902	NC_008611.1	942753	944579	D	membrane protein; PPE family protein	942753..944579	Mycobacterium ulcerans Agy99	4550785
YP_905003.1	CDS	choD	NC_008611.1	944668	946413	D	membrane protein; involved in cholesterol metabolism [catalytic activity: cholesterol + O(2) = cholest-4-en-3-one + H(2)O(2)]; cholesterol oxidase ChoD	944668..946413	Mycobacterium ulcerans Agy99	4550786
YP_905004.1	CDS	tauD	NC_008611.1	946439	947335	R	cytoplasmic protein; in E. coli this enzyme catalyses the oxygenolytic release of sulfite from taurine.; taurine catabolism dioxygenase, TauD	complement(946439..947335)	Mycobacterium ulcerans Agy99	4550787
YP_905005.1	CDS	MUL_0905	NC_008611.1	947396	947971	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulator	947396..947971	Mycobacterium ulcerans Agy99	4550788
YP_905006.1	CDS	MUL_0906	NC_008611.1	947957	949873	R	cytoplasmic protein; similar to maltose phosphorylase, a dimeric enzyme that catalyses the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose; glycosyl hydrolase	complement(947957..949873)	Mycobacterium ulcerans Agy99	4550789
YP_905007.1	CDS	MUL_0907	NC_008611.1	950296	951342	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	950296..951342	Mycobacterium ulcerans Agy99	4550790
YP_905008.1	CDS	MUL_0908	NC_008611.1	951308	951865	R	cytoplasmic protein; cellular metabolism; hydrolase	complement(951308..951865)	Mycobacterium ulcerans Agy99	4550791
YP_905009.1	CDS	MUL_0909	NC_008611.1	951947	952465	D	cytoplasmic protein; hypothetical protein	951947..952465	Mycobacterium ulcerans Agy99	4550792
YP_905010.1	CDS	MUL_0910	NC_008611.1	952504	953121	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	952504..953121	Mycobacterium ulcerans Agy99	4550793
YP_905011.1	CDS	MUL_0911	NC_008611.1	953118	954674	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS) Also detected in the cytoplasmic fraction by 2D- LC-MS/MS.; membrane protein; integral membrane transport protein	complement(953118..954674)	Mycobacterium ulcerans Agy99	4550794
YP_905012.1	CDS	MUL_0912	NC_008611.1	954753	955436	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	954753..955436	Mycobacterium ulcerans Agy99	4550795
YP_905013.1	CDS	guaA	NC_008611.1	955509	957092	D	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase	955509..957092	Mycobacterium ulcerans Agy99	4550796
YP_905014.1	CDS	MUL_0914	NC_008611.1	957160	957849	R	secreted protein; hypothetical protein	complement(957160..957849)	Mycobacterium ulcerans Agy99	4550797
YP_905015.1	CDS	MUL_0915	NC_008611.1	957923	958615	D	cytoplasmic protein; hypothetical protein	957923..958615	Mycobacterium ulcerans Agy99	4550798
YP_905016.1	CDS	MUL_0916	NC_008611.1	958622	960193	D	secreted protein; function unknown but belongs to the DNA/RNA polymerase superfamily; hypothetical protein	958622..960193	Mycobacterium ulcerans Agy99	4551638
YP_905017.1	CDS	acrA1	NC_008611.1	961261	963273	R	cytoplasmic protein; multi functional protein with fatty acyl-CoA reductase activity in C-terminal part; short chain dehydrogenase	complement(961261..963273)	Mycobacterium ulcerans Agy99	4551640
YP_905018.1	CDS	lpqD	NC_008611.1	963313	964026	R	membrane protein; lipoprotein LpqD	complement(963313..964026)	Mycobacterium ulcerans Agy99	4551641
YP_905019.1	CDS	MUL_0920	NC_008611.1	964122	964994	D	Also detected as secreted protein; cytoplasmic protein; may have dehydratase activity; contains a MaoC protein family domain; hypothetical protein	964122..964994	Mycobacterium ulcerans Agy99	4551642
YP_905020.1	CDS	otsB2	NC_008611.1	965008	966180	R	cytoplasmic protein; involved in osmoregulatory trehalose biosynthesis. mycobacteria can produce trehalose from glucose 6- phosphate and UDP-glucose (the OtsA-OtsB pathway) from glycogen-like alpha(1-->4)-linked glucose polymers (the TreY-TreZ pathway) and from maltose (the TreS pathway) [catalytic activity: trehalose 6-phosphate + H(2)O = trehalose + orthophosphate]; trehalose-6-phosphate phosphatase OtsB2	complement(965008..966180)	Mycobacterium ulcerans Agy99	4551643
YP_905021.1	CDS	dnaE2	NC_008611.1	967815	971081	D	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase	967815..971081	Mycobacterium ulcerans Agy99	4551645
YP_905022.1	CDS	MUL_0925	NC_008611.1	972061	973107	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	972061..973107	Mycobacterium ulcerans Agy99	4551648
YP_905023.1	CDS	MUL_0926	NC_008611.1	973244	974167	R	membrane protein; hypothetical protein	complement(973244..974167)	Mycobacterium ulcerans Agy99	4551649
YP_905024.1	CDS	narK3_3	NC_008611.1	974498	976018	R	membrane protein; involved in secretion of nitrite produced by the dissimilatory reduction of nitrate. responsible for the translocation of the substrate across the membrane.; nitrite extrusion protein, NarK3_3	complement(974498..976018)	Mycobacterium ulcerans Agy99	4551650
YP_905025.1	CDS	MUL_0928	NC_008611.1	975996	976418	R	cytoplasmic protein; hypothetical protein	complement(975996..976418)	Mycobacterium ulcerans Agy99	4551651
YP_905026.1	CDS	MUL_0929	NC_008611.1	976518	976730	R	cytoplasmic protein; hypothetical protein	complement(976518..976730)	Mycobacterium ulcerans Agy99	4551652
YP_905027.1	CDS	MUL_0931	NC_008611.1	977672	979270	R	cytoplasmic protein; may be a regulatory protein; hypothetical protein	complement(977672..979270)	Mycobacterium ulcerans Agy99	4551654
YP_905028.1	CDS	rocA	NC_008611.1	979304	980986	D	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; involved in the arginase pathway [catalytic activity: 1-pyrroline-5-carboxylate + NAD(+) + H(2)O = L- glutamate + NADH]; pyrroline-5-carboxylate dehydrogenase, RocA	979304..980986	Mycobacterium ulcerans Agy99	4551655
YP_905029.1	CDS	putA	NC_008611.1	980986	981945	D	cytoplasmic protein; oxidizes proline to glutamate for use as a carbon and nitrogen source [catalytic activity: L-proline + acceptor + H2O = (S)-1-pyrroline-5-carboxylate + reduced acceptor]; proline dehydrogenase, PutA	980986..981945	Mycobacterium ulcerans Agy99	4552184
YP_905030.1	CDS	MUL_0934	NC_008611.1	981972	982625	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulator	complement(981972..982625)	Mycobacterium ulcerans Agy99	4552185
YP_905031.1	CDS	ltp2	NC_008611.1	982609	983778	R	membrane protein; lipid-transfer protein; lipid-transfer protein	complement(982609..983778)	Mycobacterium ulcerans Agy99	4552186
YP_905032.1	CDS	MUL_0936	NC_008611.1	983775	984230	R	cytoplasmic protein; hypothetical protein	complement(983775..984230)	Mycobacterium ulcerans Agy99	4552187
YP_905033.1	CDS	MUL_0937	NC_008611.1	984227	984655	R	cytoplasmic protein; hypothetical protein	complement(984227..984655)	Mycobacterium ulcerans Agy99	4552188
YP_905034.1	CDS	MUL_0938	NC_008611.1	984655	985320	R	cytoplasmic protein; hypothetical protein	complement(984655..985320)	Mycobacterium ulcerans Agy99	4552189
YP_905035.1	CDS	aldA_1	NC_008611.1	985483	986949	D	cytoplasmic protein; oxidizes a variety of aldehydes [catalytic activity: an aldehyde + NAD+ + H2O = an acid + NADH]; NAD-dependent aldehyde dehydrogenase AldA	985483..986949	Mycobacterium ulcerans Agy99	4552190
YP_905036.1	CDS	MUL_0942	NC_008611.1	988063	988866	D	cytoplasmic protein; hypothetical protein	988063..988866	Mycobacterium ulcerans Agy99	4552192
YP_905037.1	CDS	fadD36	NC_008611.1	988911	990329	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	988911..990329	Mycobacterium ulcerans Agy99	4552193
YP_905038.1	CDS	MUL_0944	NC_008611.1	990332	991597	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	complement(990332..991597)	Mycobacterium ulcerans Agy99	4552194
YP_905039.1	CDS	MUL_0946	NC_008611.1	992344	992643	D	PE31; membrane protein; PPE family protein	992344..992643	Mycobacterium ulcerans Agy99	4552195
YP_905040.1	CDS	MUL_0947	NC_008611.1	992683	993864	D	PPE18; membrane protein; PPE family protein	992683..993864	Mycobacterium ulcerans Agy99	4552196
YP_905041.1	CDS	MUL_0948	NC_008611.1	994021	994683	R	hypothetical protein	complement(994021..994683)	Mycobacterium ulcerans Agy99	4552197
YP_905042.1	CDS	MUL_0949	NC_008611.1	995097	996380	D	membrane protein; integral membrane transport protein	995097..996380	Mycobacterium ulcerans Agy99	4552198
YP_905043.1	CDS	MUL_0950	NC_008611.1	997038	998090	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	997038..998090	Mycobacterium ulcerans Agy99	4552199
YP_905044.1	CDS	MUL_0951	NC_008611.1	998130	998492	R	membrane protein; hypothetical protein	complement(998130..998492)	Mycobacterium ulcerans Agy99	4552200
YP_905045.1	CDS	MUL_0952	NC_008611.1	998647	999147	D	cytoplasmic protein; putative regulatory protein	998647..999147	Mycobacterium ulcerans Agy99	4552201
YP_905046.1	CDS	MUL_0953	NC_008611.1	999202	1000146	R	Detected in the membrane fraction by proteomics.; membrane protein; function unknown, probably involved in cellular metabolism; transferase	complement(999202..1000146)	Mycobacterium ulcerans Agy99	4552202
YP_905047.1	CDS	dapE	NC_008611.1	1000269	1001333	D	catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate; succinyl-diaminopimelate desuccinylase	1000269..1001333	Mycobacterium ulcerans Agy99	4552203
YP_905048.1	CDS	MUL_0955	NC_008611.1	1001361	1003466	R	membrane protein; hypothetical protein	complement(1001361..1003466)	Mycobacterium ulcerans Agy99	4552204
YP_905049.1	CDS	MUL_0956	NC_008611.1	1003593	1004156	D	cytoplasmic protein; hypothetical protein	1003593..1004156	Mycobacterium ulcerans Agy99	4552205
YP_905050.1	CDS	fadD6	NC_008611.1	1004227	1006008	D	activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase	1004227..1006008	Mycobacterium ulcerans Agy99	4552206
YP_905051.1	CDS	folP2	NC_008611.1	1006098	1006973	D	involved in dihydrofolate biosynthesis [catalytic activity : 2-amino-4-hydroxy-6-hydroxymethyl-7,8- dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate]; dihydropteroate synthase 2 FolP2	1006098..1006973	Mycobacterium ulcerans Agy99	4552207
YP_905052.1	CDS	MUL_0959	NC_008611.1	1006970	1007953	D	cytoplasmic protein; putative glucosyl-3-phosphoglycerate synthase	1006970..1007953	Mycobacterium ulcerans Agy99	4552208
YP_905053.1	CDS	MUL_0960	NC_008611.1	1008002	1008373	D	Detected in the membrane fraction by proteomics (LC- MS/MS); secreted protein; hypothetical protein	1008002..1008373	Mycobacterium ulcerans Agy99	4552209
YP_905054.1	CDS	tagA	NC_008611.1	1008370	1008948	D	cytoplasmic protein; involved in base excision repair. hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions; DNA-3-methyladenine glycosylase I TagA	1008370..1008948	Mycobacterium ulcerans Agy99	4552210
YP_905055.1	CDS	MUL_0962	NC_008611.1	1009053	1009280	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS; cytoplasmic protein; hypothetical protein	1009053..1009280	Mycobacterium ulcerans Agy99	4552211
YP_905056.1	CDS	MUL_0964	NC_008611.1	1010063	1011928	D	secreted protein; PPE family protein	1010063..1011928	Mycobacterium ulcerans Agy99	4552213
YP_905057.1	CDS	MUL_0965	NC_008611.1	1012406	1015081	D	secreted protein; PPE family protein	1012406..1015081	Mycobacterium ulcerans Agy99	4552214
YP_905058.1	CDS	MUL_0966	NC_008611.1	1015138	1016472	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(1015138..1016472)	Mycobacterium ulcerans Agy99	4552215
YP_905059.1	CDS	MUL_0967	NC_008611.1	1016724	1018367	R	secreted protein; PE family protein	complement(1016724..1018367)	Mycobacterium ulcerans Agy99	4552216
YP_905060.1	CDS	fadA6_3	NC_008611.1	1022048	1023196	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; function unknown, but involved in lipid degradation [catalytic activity: 2 acetyl-CoA = CoA + acetoacetyl- CoA]; acetyl-CoA acetyltransferase	1022048..1023196	Mycobacterium ulcerans Agy99	4552219
YP_905061.1	CDS	echA1_1	NC_008611.1	1023193	1023996	D	cytoplasmic protein; oxidize fatty acids using specific components [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA1	1023193..1023996	Mycobacterium ulcerans Agy99	4552794
YP_905062.1	CDS	MUL_0974	NC_008611.1	1026444	1027778	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(1026444..1027778)	Mycobacterium ulcerans Agy99	4552796
YP_905063.1	CDS	MUL_0976	NC_008611.1	1028294	1029340	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(1028294..1029340)	Mycobacterium ulcerans Agy99	4552798
YP_905064.1	CDS	MUL_0977	NC_008611.1	1029718	1031052	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	1029718..1031052	Mycobacterium ulcerans Agy99	4552799
YP_905065.1	CDS	MUL_0979	NC_008611.1	1032499	1033767	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(1032499..1033767)	Mycobacterium ulcerans Agy99	4552801
YP_905066.1	CDS	MUL_0980	NC_008611.1	1033764	1034273	R	membrane protein; hypothetical protein	complement(1033764..1034273)	Mycobacterium ulcerans Agy99	4552802
YP_905067.1	CDS	MUL_0982	NC_008611.1	1035419	1036522	D	cytoplasmic protein; hypothetical protein	1035419..1036522	Mycobacterium ulcerans Agy99	4552804
YP_905068.1	CDS	MUL_0983	NC_008611.1	1036586	1037395	D	membrane protein; integral membrane protein	1036586..1037395	Mycobacterium ulcerans Agy99	4552805
YP_905069.1	CDS	echA10	NC_008611.1	1038864	1039667	R	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(1038864..1039667)	Mycobacterium ulcerans Agy99	4552807
YP_905070.1	CDS	mcr	NC_008611.1	1039821	1040918	D	cytoplasmic protein; required for bile acid synthesis and for catabolism of branched-chain fatty acids; alpha-methylacyl-CoA racemase Mcr	1039821..1040918	Mycobacterium ulcerans Agy99	4552808
YP_905071.1	CDS	MUL_0987	NC_008611.1	1040976	1041737	D	Detected in the cytoplasmic and membrane fraction by LC-MS/MS. Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; function unknown, supposed involved in cellular metabolism.; short-chain type dehydrogenase/reductase	1040976..1041737	Mycobacterium ulcerans Agy99	4552809
YP_905072.1	CDS	MUL_0988	NC_008611.1	1041874	1042029	R	hypothetical protein	complement(1041874..1042029)	Mycobacterium ulcerans Agy99	4552810
YP_905073.1	CDS	mmpL13	NC_008611.1	1042387	1044729	D	membrane protein; thought to be involved in fatty acid transport.; transmembrane transport protein MmpL13	1042387..1044729	Mycobacterium ulcerans Agy99	4552811
YP_905074.1	CDS	MUL_0990	NC_008611.1	1044746	1045429	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	1044746..1045429	Mycobacterium ulcerans Agy99	4552812
YP_905075.1	CDS	MUL_0991	NC_008611.1	1045426	1046064	D	cytoplasmic protein; hypothetical protein	1045426..1046064	Mycobacterium ulcerans Agy99	4552813
YP_905076.1	CDS	MUL_0992	NC_008611.1	1046172	1046888	R	Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase	complement(1046172..1046888)	Mycobacterium ulcerans Agy99	4552814
YP_905077.1	CDS	MUL_0993	NC_008611.1	1046947	1047312	D	cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein	1046947..1047312	Mycobacterium ulcerans Agy99	4552815
YP_905078.1	CDS	MUL_0995	NC_008611.1	1048174	1048725	R	cytoplasmic protein; hypothetical protein	complement(1048174..1048725)	Mycobacterium ulcerans Agy99	4552817
YP_905079.1	CDS	MUL_0996	NC_008611.1	1048746	1049189	D	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; hypothetical protein	1048746..1049189	Mycobacterium ulcerans Agy99	4552818
YP_905080.1	CDS	MUL_0997	NC_008611.1	1049212	1049400	D	cytoplasmic protein; hypothetical protein	1049212..1049400	Mycobacterium ulcerans Agy99	4552819
YP_905081.1	CDS	MUL_0998	NC_008611.1	1050322	1050519	D	cytoplasmic protein; hypothetical protein	1050322..1050519	Mycobacterium ulcerans Agy99	4552820
YP_905082.1	CDS	MUL_0999	NC_008611.1	1050554	1050958	R	membrane protein; hypothetical protein	complement(1050554..1050958)	Mycobacterium ulcerans Agy99	4552821
YP_905083.1	CDS	MUL_1000	NC_008611.1	1051011	1052057	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(1051011..1052057)	Mycobacterium ulcerans Agy99	4552822
YP_905084.1	CDS	MUL_1001	NC_008611.1	1052616	1053740	R	membrane protein; hypothetical protein	complement(1052616..1053740)	Mycobacterium ulcerans Agy99	4552823
YP_905085.1	CDS	MUL_1002	NC_008611.1	1053998	1054573	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; hypothetical protein	1053998..1054573	Mycobacterium ulcerans Agy99	4552824
YP_905086.1	CDS	MUL_1003	NC_008611.1	1054598	1054744	D	cytoplasmic protein; hypothetical protein	1054598..1054744	Mycobacterium ulcerans Agy99	4552825
YP_905087.1	CDS	MUL_1004	NC_008611.1	1054776	1055987	R	secreted protein; hypothetical protein	complement(1054776..1055987)	Mycobacterium ulcerans Agy99	4552826
YP_905088.1	CDS	MUL_1005	NC_008611.1	1056037	1056663	R	secreted protein; hypothetical protein	complement(1056037..1056663)	Mycobacterium ulcerans Agy99	4552827
YP_905089.1	CDS	pimE	NC_008611.1	1056805	1058073	D	involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis; mannosyltransferase	1056805..1058073	Mycobacterium ulcerans Agy99	4552828
YP_905090.1	CDS	phhB	NC_008611.1	1058099	1058377	R	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase	complement(1058099..1058377)	Mycobacterium ulcerans Agy99	4552829
YP_905091.1	CDS	mutT2	NC_008611.1	1058637	1059059	D	cytoplasmic protein; involved in the go system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine) from DNA and the nucleotide pool. 8-oxo-dGTP is inserted opposite da and dc residues of template DNA with almost equal efficiency thus leading to AT to GC transversions. MutT specifically degrades 8-oxo-dGTP to the monophosphate.; mutator protein MutT2	1058637..1059059	Mycobacterium ulcerans Agy99	4552830
YP_905092.1	CDS	typA	NC_008611.1	1059311	1061197	D	cytoplasmic protein; function unknown, probably interacts with the ribosomes in a GTP dependent manner; GTP-binding translation elongation factor TypA	1059311..1061197	Mycobacterium ulcerans Agy99	4552831
YP_905093.1	CDS	lpqW	NC_008611.1	1061301	1063199	D	membrane protein; lipoprotein LpqW	1061301..1063199	Mycobacterium ulcerans Agy99	4552832
YP_905094.1	CDS	MUL_1011	NC_008611.1	1063504	1064550	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1063504..1064550	Mycobacterium ulcerans Agy99	4552833
YP_905095.1	CDS	MUL_1012	NC_008611.1	1064784	1066115	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	1064784..1066115	Mycobacterium ulcerans Agy99	4552834
YP_905096.1	CDS	mshB	NC_008611.1	1070568	1071473	D	cytoplasmic protein; involved in mycothiol biosynthesis. 1-D-myo- inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins)is converted to 1-D-myo-inosityl-2-amino-2- deoxy-alpha-D-glucopyranoside (GlcN-Ins) by this enzyme. seems to possesse weak mycothiol conjugate ami; N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB	1070568..1071473	Mycobacterium ulcerans Agy99	4552838
YP_905097.1	CDS	MUL_1018	NC_008611.1	1071684	1072043	D	membrane protein; function unknown -possibly a transmembrane protein; hypothetical protein	1071684..1072043	Mycobacterium ulcerans Agy99	4552839
YP_905098.1	CDS	MUL_1019	NC_008611.1	1072073	1072960	R	secreted protein; PE family protein	complement(1072073..1072960)	Mycobacterium ulcerans Agy99	4552840
YP_905099.1	CDS	fbiC	NC_008611.1	1073165	1075735	D	7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis; FO synthase	1073165..1075735	Mycobacterium ulcerans Agy99	4552841
YP_905100.1	CDS	MUL_1021	NC_008611.1	1076307	1078850	D	membrane protein; PE-PGRS family protein	1076307..1078850	Mycobacterium ulcerans Agy99	4552842
YP_905101.1	CDS	MUL_1022	NC_008611.1	1079060	1079395	R	secreted protein; function unknown function (secreted protein); putative antigen	complement(1079060..1079395)	Mycobacterium ulcerans Agy99	4552692
YP_905102.1	CDS	fadH	NC_008611.1	1079607	1081631	R	cytoplasmic protein; catalyzes the NADP-dependent reduction of 2,4- dienoyl-CoA to yield trans-2- enoyl-CoA [catalytic activity: trans-2,3-didehydroacyl-CoA + NADP(+) = trans, trans-2,3,4,5-tetradehydroacyl-CoA + NADPH]; NADPH dependent 2,4-dienoyl-CoA reductase FadH	complement(1079607..1081631)	Mycobacterium ulcerans Agy99	4552693
YP_905103.1	CDS	MUL_1024	NC_008611.1	1081631	1082374	R	cytoplasmic protein; hypothetical protein	complement(1081631..1082374)	Mycobacterium ulcerans Agy99	4552694
YP_905104.1	CDS	fdxC	NC_008611.1	1082411	1082737	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.; ferredoxin FdxC	1082411..1082737	Mycobacterium ulcerans Agy99	4552695
YP_905105.1	CDS	MUL_1026	NC_008611.1	1082767	1083864	D	catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; N-succinyldiaminopimelate aminotransferase	1082767..1083864	Mycobacterium ulcerans Agy99	4552696
YP_905106.1	CDS	MUL_1030	NC_008611.1	1089450	1090784	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	1089450..1090784	Mycobacterium ulcerans Agy99	4552699
YP_905107.1	CDS	MUL_1034	NC_008611.1	1093210	1094727	R	PE4; membrane protein; PE family protein	complement(1093210..1094727)	Mycobacterium ulcerans Agy99	4552703
YP_905108.1	CDS	MUL_1035	NC_008611.1	1094855	1095775	R	cytoplasmic protein; hypothetical protein	complement(1094855..1095775)	Mycobacterium ulcerans Agy99	4552704
YP_905109.1	CDS	fabG3	NC_008611.1	1096982	1097722	D	cytoplasmic protein; not really known; thought to be involved in lipid biosynthesis [catalytic activity: androstan-3-alpha,17- beta-diol + NAD+ = 17-beta-hydroxyandrostan-3-one + NADH]; 20-beta-hydroxysteroid dehydrogenase FabG3	1096982..1097722	Mycobacterium ulcerans Agy99	4552706
YP_905110.1	CDS	MUL_1038	NC_008611.1	1097743	1099083	D	membrane protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	1097743..1099083	Mycobacterium ulcerans Agy99	4552707
YP_905111.1	CDS	MUL_1039	NC_008611.1	1099090	1099635	R	cytoplasmic protein; function unknown.  contains TetR_N, bacterial regulatory proteins, TetR family domain. possibly involved in transcriptional mechanism.; putative regulatory protein	complement(1099090..1099635)	Mycobacterium ulcerans Agy99	4552708
YP_905112.1	CDS	MUL_1043	NC_008611.1	1102416	1103312	D	cytoplasmic protein; hypothetical protein	1102416..1103312	Mycobacterium ulcerans Agy99	4553194
YP_905113.1	CDS	MUL_1044	NC_008611.1	1103335	1104012	R	cytoplasmic protein; hypothetical protein	complement(1103335..1104012)	Mycobacterium ulcerans Agy99	4553195
YP_905114.1	CDS	MUL_1045	NC_008611.1	1103877	1105163	R	cytoplasmic protein; hypothetical protein	complement(1103877..1105163)	Mycobacterium ulcerans Agy99	4553196
YP_905115.1	CDS	MUL_1046	NC_008611.1	1105280	1106449	D	cytoplasmic protein; acyl-CoA transferase	1105280..1106449	Mycobacterium ulcerans Agy99	4553197
YP_905116.1	CDS	MUL_1047	NC_008611.1	1106691	1107059	D	cytoplasmic protein; hypothetical protein	1106691..1107059	Mycobacterium ulcerans Agy99	4553198
YP_905117.1	CDS	cyp191A3	NC_008611.1	1107880	1109088	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 191A3 Cyp191A3	1107880..1109088	Mycobacterium ulcerans Agy99	4553200
YP_905118.1	CDS	MUL_1051	NC_008611.1	1110055	1110816	D	cytoplasmic protein; hypothetical protein	1110055..1110816	Mycobacterium ulcerans Agy99	4553202
YP_905119.1	CDS	MUL_1052	NC_008611.1	1110813	1111547	D	cytoplasmic protein; short chain dehydrogenase	1110813..1111547	Mycobacterium ulcerans Agy99	4553203
YP_905120.1	CDS	MUL_1053	NC_008611.1	1111544	1113136	D	membrane protein; function unknown, probably involved in cellular metabolism.; monooxygenase	1111544..1113136	Mycobacterium ulcerans Agy99	4553204
YP_905121.1	CDS	lipW	NC_008611.1	1113151	1113987	D	cytoplasmic protein; function unknown, lipolytic enzyme probably involved in cellular metabolism.; esterase LipW	1113151..1113987	Mycobacterium ulcerans Agy99	4553205
YP_905122.1	CDS	MUL_1056	NC_008611.1	1115138	1115611	D	hypothetical protein	1115138..1115611	Mycobacterium ulcerans Agy99	4553207
YP_905123.1	CDS	MUL_1057	NC_008611.1	1115663	1116124	D	Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; hypothetical protein	1115663..1116124	Mycobacterium ulcerans Agy99	4553208
YP_905124.1	CDS	MUL_1058	NC_008611.1	1116149	1116841	R	cytoplasmic protein; possibly involved in transcriptional mechanism.; GntR family transcriptional regulator	complement(1116149..1116841)	Mycobacterium ulcerans Agy99	4553209
YP_905125.1	CDS	yrbE1A	NC_008611.1	1118876	1119679	D	membrane protein; integral membrane protein YrbE1A	1118876..1119679	Mycobacterium ulcerans Agy99	4553211
YP_905126.1	CDS	yrbE1B	NC_008611.1	1119681	1120550	D	membrane protein; integral membrane protein YrbE1B	1119681..1120550	Mycobacterium ulcerans Agy99	4553212
YP_905127.1	CDS	mce1A	NC_008611.1	1120555	1121859	D	membrane protein; function unknown, but thought to be involved in host cell invasion (entry and survival inside macrophages); MCE-family protein Mce1A	1120555..1121859	Mycobacterium ulcerans Agy99	4553213
YP_905128.1	CDS	mce1B	NC_008611.1	1121856	1122896	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce1B	1121856..1122896	Mycobacterium ulcerans Agy99	4553214
YP_905129.1	CDS	mce1C	NC_008611.1	1122893	1124458	D	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce1C	1122893..1124458	Mycobacterium ulcerans Agy99	4553215
YP_905130.1	CDS	mce1D	NC_008611.1	1124455	1126062	D	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce1D	1124455..1126062	Mycobacterium ulcerans Agy99	4553216
YP_905131.1	CDS	lprK	NC_008611.1	1126080	1127285	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE family lipoprotein LprK	1126080..1127285	Mycobacterium ulcerans Agy99	4553217
YP_905132.1	CDS	mce1F	NC_008611.1	1127279	1128832	D	Also detected in the membrane fraction by proteomics.; membrane protein; function unknown, but thought involved in host cell invasion.; MCE-family protein Mce1F	1127279..1128832	Mycobacterium ulcerans Agy99	4553218
YP_905133.1	CDS	MUL_1068	NC_008611.1	1128856	1129530	D	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic fraction (2D- MALDI); membrane protein; Mce associated membrane protein	1128856..1129530	Mycobacterium ulcerans Agy99	4553219
YP_905134.1	CDS	MUL_1069	NC_008611.1	1129527	1130516	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; Mce associated transmembrane protein	1129527..1130516	Mycobacterium ulcerans Agy99	4553220
YP_905135.1	CDS	MUL_1070	NC_008611.1	1130513	1131070	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; Mce associated protein	1130513..1131070	Mycobacterium ulcerans Agy99	4553221
YP_905136.1	CDS	MUL_1071	NC_008611.1	1131037	1131831	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; Mce associated membrane protein	1131037..1131831	Mycobacterium ulcerans Agy99	4553222
YP_905137.1	CDS	MUL_1073	NC_008611.1	1133090	1134463	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	complement(1133090..1134463)	Mycobacterium ulcerans Agy99	4553224
YP_905138.1	CDS	MUL_1075	NC_008611.1	1135440	1136873	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; hypothetical protein	complement(1135440..1136873)	Mycobacterium ulcerans Agy99	4553226
YP_905139.1	CDS	sigG	NC_008611.1	1136870	1137931	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70	complement(1136870..1137931)	Mycobacterium ulcerans Agy99	4553227
YP_905140.1	CDS	MUL_1077	NC_008611.1	1137963	1138802	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; lysophospholipase	1137963..1138802	Mycobacterium ulcerans Agy99	4553228
YP_905141.1	CDS	MUL_1078	NC_008611.1	1138849	1139598	D	cytoplasmic protein; hypothetical protein	1138849..1139598	Mycobacterium ulcerans Agy99	4553229
YP_905142.1	CDS	MUL_1079	NC_008611.1	1139595	1140119	D	cytoplasmic protein; function unknown, probably involved in a cellular metabolism.; hypothetical protein	1139595..1140119	Mycobacterium ulcerans Agy99	4553230
YP_905143.1	CDS	bglS	NC_008611.1	1140176	1142251	D	membrane protein; possibly involved in degradation [catalytic activity: hydrolysis of terminal, non-reducing beta-D- glucose residues with release of beta-D-glucose]; beta-glucosidase BglS	1140176..1142251	Mycobacterium ulcerans Agy99	4553231
YP_905144.1	CDS	ilvD	NC_008611.1	1145497	1147191	R	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase	complement(1145497..1147191)	Mycobacterium ulcerans Agy99	4553233
YP_905145.1	CDS	MUL_1083	NC_008611.1	1147331	1147621	D	cytoplasmic protein; hypothetical protein	1147331..1147621	Mycobacterium ulcerans Agy99	4553234
YP_905146.1	CDS	MUL_1084	NC_008611.1	1147739	1148995	D	membrane protein; function unknown, possibly involved in transport of drug across the membrane.; integral membrane protein	1147739..1148995	Mycobacterium ulcerans Agy99	4553235
YP_905147.1	CDS	MUL_1085	NC_008611.1	1149115	1150113	D	secreted protein; secretory protein	1149115..1150113	Mycobacterium ulcerans Agy99	4553236
YP_905148.1	CDS	MUL_1086	NC_008611.1	1150332	1150907	D	cytoplasmic protein; possibly involved in transcriptional mechanism.; transcriptional regulatory protein	1150332..1150907	Mycobacterium ulcerans Agy99	4553237
YP_905149.1	CDS	MUL_1088	NC_008611.1	1153187	1155181	R	cytoplasmic protein; function unknown, hydrolyzes peptides and/or proteins.; zinc metalloprotease	complement(1153187..1155181)	Mycobacterium ulcerans Agy99	4553239
YP_905150.1	CDS	MUL_1089	NC_008611.1	1155224	1155871	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1155224..1155871	Mycobacterium ulcerans Agy99	4553240
YP_905151.1	CDS	MUL_1090	NC_008611.1	1155868	1156557	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	1155868..1156557	Mycobacterium ulcerans Agy99	4553241
YP_905152.1	CDS	MUL_1091	NC_008611.1	1156544	1157083	R	cytoplasmic protein; hypothetical protein	complement(1156544..1157083)	Mycobacterium ulcerans Agy99	4553242
YP_905153.1	CDS	mmpL11	NC_008611.1	1157080	1160097	R	membrane protein; function unknown. thought to be involved in fatty acid transport.; transmembrane transport protein MmpL11	complement(1157080..1160097)	Mycobacterium ulcerans Agy99	4553243
YP_905154.1	CDS	MUL_1093	NC_008611.1	1160452	1160961	D	secreted protein; exported protein	1160452..1160961	Mycobacterium ulcerans Agy99	4553244
YP_905155.1	CDS	MUL_1094	NC_008611.1	1160963	1162180	R	membrane protein; transmembrane protein	complement(1160963..1162180)	Mycobacterium ulcerans Agy99	4553514
YP_905156.1	CDS	mmpL3	NC_008611.1	1163592	1166474	R	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; function unknown. thought to be involved in fatty acid transport.; transmembrane transport protein MmpL3	complement(1163592..1166474)	Mycobacterium ulcerans Agy99	4553516
YP_905157.1	CDS	MUL_1097	NC_008611.1	1166580	1167317	R	cytoplasmic protein; hypothetical protein	complement(1166580..1167317)	Mycobacterium ulcerans Agy99	4553517
YP_905158.1	CDS	trmB	NC_008611.1	1167355	1168191	R	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase	complement(1167355..1168191)	Mycobacterium ulcerans Agy99	4553518
YP_905159.1	CDS	MUL_1099	NC_008611.1	1168355	1169485	D	cytoplasmic protein; hypothetical protein	1168355..1169485	Mycobacterium ulcerans Agy99	4553519
YP_905160.1	CDS	MUL_1100	NC_008611.1	1169383	1171035	D	Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; secreted protein; hypothetical protein	1169383..1171035	Mycobacterium ulcerans Agy99	4553520
YP_905161.1	CDS	pckA	NC_008611.1	1171238	1173067	D	catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase	1171238..1173067	Mycobacterium ulcerans Agy99	4553521
YP_905162.1	CDS	echA8_4	NC_008611.1	1174603	1175571	D	cytoplasmic protein; oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA8_4	1174603..1175571	Mycobacterium ulcerans Agy99	4553523
YP_905163.1	CDS	MUL_1104	NC_008611.1	1175568	1175825	R	membrane protein; hypothetical protein	complement(1175568..1175825)	Mycobacterium ulcerans Agy99	4553524
YP_905164.1	CDS	MUL_1106	NC_008611.1	1177424	1178470	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1177424..1178470	Mycobacterium ulcerans Agy99	4553526
YP_905165.1	CDS	MUL_1107	NC_008611.1	1178681	1179688	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; hypothetical protein	1178681..1179688	Mycobacterium ulcerans Agy99	4553527
YP_905166.1	CDS	MUL_1109	NC_008611.1	1180974	1182245	D	cytoplasmic protein; hypothetical protein	1180974..1182245	Mycobacterium ulcerans Agy99	4553529
YP_905167.1	CDS	MUL_1110	NC_008611.1	1183273	1184619	D	membrane protein; hypothetical protein	1183273..1184619	Mycobacterium ulcerans Agy99	4553531
YP_905168.1	CDS	MUL_1111	NC_008611.1	1184621	1185139	D	membrane protein; hypothetical protein	1184621..1185139	Mycobacterium ulcerans Agy99	4553532
YP_905169.1	CDS	lipC	NC_008611.1	1185295	1186473	D	cytoplasmic protein; function unknown, lipolytic enzyme probably involved in cellular metabolism.; esterase LipC	1185295..1186473	Mycobacterium ulcerans Agy99	4553533
YP_905170.1	CDS	echA1	NC_008611.1	1187955	1188737	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	1187955..1188737	Mycobacterium ulcerans Agy99	4553535
YP_905171.1	CDS	MUL_1115	NC_008611.1	1188836	1190323	D	cytoplasmic protein; function unknown, but involved in lipid degradation.; long-chain-fatty-acid-CoA ligase	1188836..1190323	Mycobacterium ulcerans Agy99	4553536
YP_905172.1	CDS	MUL_1116	NC_008611.1	1190353	1190616	D	cytoplasmic protein; hypothetical protein	1190353..1190616	Mycobacterium ulcerans Agy99	4553537
YP_905173.1	CDS	MUL_1117	NC_008611.1	1191193	1192920	D	membrane protein; function unknown, but involvement in lipid degradation.; fatty-acid-CoA ligase	1191193..1192920	Mycobacterium ulcerans Agy99	4553538
YP_905174.1	CDS	MUL_1119	NC_008611.1	1197774	1198394	R	membrane protein; possibly involved in transcriptional mechanism.; transcriptional regulatory protein	complement(1197774..1198394)	Mycobacterium ulcerans Agy99	4553540
YP_905175.1	CDS	MUL_1121	NC_008611.1	1198750	1199520	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	1198750..1199520	Mycobacterium ulcerans Agy99	4553541
YP_905176.1	CDS	MUL_1122	NC_008611.1	1199585	1201051	R	membrane protein; thought to oxidize a wide variety of aliphatic and aromatic aldehydes.; aldehyde dehydrogenase	complement(1199585..1201051)	Mycobacterium ulcerans Agy99	4553542
YP_905177.1	CDS	MUL_1123	NC_008611.1	1201096	1201863	R	membrane protein; causes methylation; methyltransferase	complement(1201096..1201863)	Mycobacterium ulcerans Agy99	4553543
YP_905178.1	CDS	MUL_1124	NC_008611.1	1201919	1203082	D	cytoplasmic protein; function unknown, contains a glycosyltransferase domain (cell envelope biogenesis, outer membrane); glycosyltransferase	1201919..1203082	Mycobacterium ulcerans Agy99	4553544
YP_905179.1	CDS	MUL_1125	NC_008611.1	1203092	1204879	R	membrane protein; transmembrane protein	complement(1203092..1204879)	Mycobacterium ulcerans Agy99	4553545
YP_905180.1	CDS	MUL_1126	NC_008611.1	1204902	1206167	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(1204902..1206167)	Mycobacterium ulcerans Agy99	4553546
YP_905181.1	CDS	MUL_1127	NC_008611.1	1206320	1207528	D	membrane protein; function unknown, probably involved in cellular metabolism.; integral membrane acyltransferase	1206320..1207528	Mycobacterium ulcerans Agy99	4553547
YP_905182.1	CDS	MUL_1129	NC_008611.1	1208362	1209408	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1208362..1209408	Mycobacterium ulcerans Agy99	4553549
YP_905183.1	CDS	MUL_1130	NC_008611.1	1210925	1211221	R	cytoplasmic protein; hypothetical protein	complement(1210925..1211221)	Mycobacterium ulcerans Agy99	4553451
YP_905184.1	CDS	MUL_1131	NC_008611.1	1211160	1211516	R	cytoplasmic protein; hypothetical protein	complement(1211160..1211516)	Mycobacterium ulcerans Agy99	4553452
YP_905185.1	CDS	MUL_1132	NC_008611.1	1211867	1212136	R	cytoplasmic protein; hypothetical protein	complement(1211867..1212136)	Mycobacterium ulcerans Agy99	4553453
YP_905186.1	CDS	MUL_1133	NC_008611.1	1212121	1213065	R	cytoplasmic protein; hypothetical protein	complement(1212121..1213065)	Mycobacterium ulcerans Agy99	4553454
YP_905187.1	CDS	MUL_1134	NC_008611.1	1213239	1213526	R	cytoplasmic protein; hypothetical protein	complement(1213239..1213526)	Mycobacterium ulcerans Agy99	4553455
YP_905188.1	CDS	MUL_1135	NC_008611.1	1214094	1214321	D	cytoplasmic protein; hypothetical protein	1214094..1214321	Mycobacterium ulcerans Agy99	4553456
YP_905189.1	CDS	MUL_1136	NC_008611.1	1214390	1215136	R	membrane protein; hypothetical protein	complement(1214390..1215136)	Mycobacterium ulcerans Agy99	4553457
YP_905190.1	CDS	MUL_1138	NC_008611.1	1215861	1216907	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(1215861..1216907)	Mycobacterium ulcerans Agy99	4553459
YP_905191.1	CDS	MUL_1140	NC_008611.1	1218243	1218656	D	membrane protein; hypothetical protein	1218243..1218656	Mycobacterium ulcerans Agy99	4553461
YP_905192.1	CDS	MUL_1141	NC_008611.1	1218666	1218959	D	membrane protein; hypothetical protein	1218666..1218959	Mycobacterium ulcerans Agy99	4553462
YP_905193.1	CDS	MUL_1142	NC_008611.1	1219033	1219251	D	Detected in the cytoplasmic and secreted fractions by 2D-LC-MS/MS.; secreted protein; hypothetical protein	1219033..1219251	Mycobacterium ulcerans Agy99	4553463
YP_905194.1	CDS	MUL_1143	NC_008611.1	1219302	1220429	R	cytoplasmic protein; hypothetical protein	complement(1219302..1220429)	Mycobacterium ulcerans Agy99	4553464
YP_905195.1	CDS	MUL_1144	NC_008611.1	1220579	1221064	R	membrane protein; hypothetical protein	complement(1220579..1221064)	Mycobacterium ulcerans Agy99	4554016
YP_905196.1	CDS	MUL_1145	NC_008611.1	1221305	1223809	D	PE_PGRS30; secreted protein; PE-PGRS family protein	1221305..1223809	Mycobacterium ulcerans Agy99	4554017
YP_905197.1	CDS	MUL_1147	NC_008611.1	1224435	1225769	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(1224435..1225769)	Mycobacterium ulcerans Agy99	4554019
YP_905198.1	CDS	MUL_1148	NC_008611.1	1226060	1227562	D	cytoplasmic protein; DNA polymerase	1226060..1227562	Mycobacterium ulcerans Agy99	4554020
YP_905199.1	CDS	MUL_1149	NC_008611.1	1227605	1228489	R	secreted protein; PE-PGRS family protein	complement(1227605..1228489)	Mycobacterium ulcerans Agy99	4554021
YP_905200.1	CDS	php	NC_008611.1	1228670	1229650	R	cytoplasmic protein; enzymatic activity is not yet known [catalytic activity: aryl dialkyl phosphate + H2O = dialkyl phosphate + an aryl alcohol]; phosphotriesterase PHP	complement(1228670..1229650)	Mycobacterium ulcerans Agy99	4554022
YP_905201.1	CDS	fadE4	NC_008611.1	1229992	1231698	D	function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE4	1229992..1231698	Mycobacterium ulcerans Agy99	4554023
YP_905202.1	CDS	MUL_1152	NC_008611.1	1231797	1232468	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	1231797..1232468	Mycobacterium ulcerans Agy99	4554024
YP_905203.1	CDS	gabD1	NC_008611.1	1232590	1233966	R	NADP-dependent semialdehyde dehydrogenase; part of alternative pathway from alpha-ketoglutarate to succinate; succinate-semialdehyde dehydrogenase	complement(1232590..1233966)	Mycobacterium ulcerans Agy99	4554025
YP_905204.1	CDS	MUL_1154	NC_008611.1	1234414	1235598	D	membrane protein; PPE family protein	1234414..1235598	Mycobacterium ulcerans Agy99	4554026
YP_905205.1	CDS	MUL_1155	NC_008611.1	1235788	1238157	D	membrane protein; PE-PGRS family protein	1235788..1238157	Mycobacterium ulcerans Agy99	4554027
YP_905206.1	CDS	MUL_1156	NC_008611.1	1238239	1239669	R	membrane protein; hypothetical protein	complement(1238239..1239669)	Mycobacterium ulcerans Agy99	4554028
YP_905207.1	CDS	glpQ2	NC_008611.1	1239794	1240555	R	cytoplasmic protein; glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [catalytic activity: a glycerophosphodiester + H(2)O = an alcohol + SN-glycerol 3- phosphate]; glycerophosphoryl diester phosphodiesterase	complement(1239794..1240555)	Mycobacterium ulcerans Agy99	4554029
YP_905208.1	CDS	MUL_1158	NC_008611.1	1240719	1241279	D	secreted protein; hypothetical protein	1240719..1241279	Mycobacterium ulcerans Agy99	4554030
YP_905209.1	CDS	MUL_1159	NC_008611.1	1241283	1245461	R	membrane protein; transmembrane protein	complement(1241283..1245461)	Mycobacterium ulcerans Agy99	4554031
YP_905210.1	CDS	MUL_1160	NC_008611.1	1245550	1245723	R	Detected in the membrane fraction by proteomics (LC- MS/MS); secreted protein; small secreted protein	complement(1245550..1245723)	Mycobacterium ulcerans Agy99	4554032
YP_905211.1	CDS	MUL_1161	NC_008611.1	1245792	1246049	R	secreted protein; putative small secreted protein	complement(1245792..1246049)	Mycobacterium ulcerans Agy99	4554033
YP_905212.1	CDS	lpqI	NC_008611.1	1246153	1247346	D	secreted protein; lipoprotein LpqI	1246153..1247346	Mycobacterium ulcerans Agy99	4554034
YP_905213.1	CDS	MUL_1163	NC_008611.1	1247433	1248059	D	cytoplasmic protein; possibly involved in transcriptional mechanism.; TetR family transcriptional regulator	1247433..1248059	Mycobacterium ulcerans Agy99	4554035
YP_905214.1	CDS	MUL_1164	NC_008611.1	1248078	1249373	D	membrane protein; function unknown, possibly ion channel involved in transport of chloride across the membrane.; transmembrane protein	1248078..1249373	Mycobacterium ulcerans Agy99	4554036
YP_905215.1	CDS	MUL_1165	NC_008611.1	1249385	1250236	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS) Also detected in the cytoplasmic fraction.; membrane protein; hypothetical protein	complement(1249385..1250236)	Mycobacterium ulcerans Agy99	4554037
YP_905216.1	CDS	fabG	NC_008611.1	1250255	1251619	R	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	complement(1250255..1251619)	Mycobacterium ulcerans Agy99	4554038
YP_905217.1	CDS	fadA2	NC_008611.1	1251789	1253114	D	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	1251789..1253114	Mycobacterium ulcerans Agy99	4554039
YP_905218.1	CDS	fadE5	NC_008611.1	1253399	1255264	R	Detected in the cytoplasmic fraction by proteomics.; cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE5	complement(1253399..1255264)	Mycobacterium ulcerans Agy99	4554040
YP_905219.1	CDS	MUL_1169	NC_008611.1	1255777	1256265	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	1255777..1256265	Mycobacterium ulcerans Agy99	4554041
YP_905220.1	CDS	MUL_5125	NC_008611.1	1257341	1257499	R	cytoplasmic protein; hypothetical protein	complement(1257341..1257499)	Mycobacterium ulcerans Agy99	4554043
YP_905221.1	CDS	sdhB_1	NC_008611.1	1257547	1258293	R	catalyzes the fumarate and succinate interconversion; fumarate reductase is used under anaerobic conditions with glucose or glycerol as carbon source; fumarate reductase iron-sulfur subunit	complement(1257547..1258293)	Mycobacterium ulcerans Agy99	4554044
YP_905222.1	CDS	sdhA	NC_008611.1	1258293	1260221	R	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit	complement(1258293..1260221)	Mycobacterium ulcerans Agy99	4554045
YP_905223.1	CDS	MUL_1173	NC_008611.1	1260268	1261089	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; could be involved in interconversion of fumarate and succinate (aerobic respiration) this hydrophobic component may be required to anchor the catalytic components of the succinate dehydrogenase complex to the cytoplasmic membrane.; succinate dehydrogenase (membrane anchor subunit)	complement(1260268..1261089)	Mycobacterium ulcerans Agy99	4554046
YP_905224.1	CDS	MUL_1175	NC_008611.1	1261636	1262340	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	1261636..1262340	Mycobacterium ulcerans Agy99	4554048
YP_905225.1	CDS	MUL_1176	NC_008611.1	1262365	1262682	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	1262365..1262682	Mycobacterium ulcerans Agy99	4554049
YP_905226.1	CDS	MUL_1177	NC_008611.1	1263037	1263726	D	cytoplasmic protein; PEP phosphonomutase	1263037..1263726	Mycobacterium ulcerans Agy99	4554050
YP_905227.1	CDS	hsp	NC_008611.1	1263801	1264259	R	cytoplasmic protein; thought to be involved in the initiation step of translation at high temperature. bound to 30S ribosomal subunit. possibly a molecular chaperone. in M. tuberculosis H37Rv seems to be regulated positively by SigE and negatively by HspR.; heat shock protein Hsp	complement(1263801..1264259)	Mycobacterium ulcerans Agy99	4554051
YP_905228.1	CDS	nirD	NC_008611.1	1267066	1267422	D	cytoplasmic protein; involved in nitrate assimilation (denitrification); required for activity of the reductase [catalytic activity: 3 NAD(P)H + nitrite = 3 NAD(P)+ + NH4OH + H2O]; nitrite reductase [NAD(P)H] small subunit NirD	1267066..1267422	Mycobacterium ulcerans Agy99	4554053
YP_905229.1	CDS	MUL_1181	NC_008611.1	1267559	1268014	R	hypothetical protein	complement(1267559..1268014)	Mycobacterium ulcerans Agy99	4554054
YP_905230.1	CDS	MUL_1182	NC_008611.1	1268071	1268832	R	cytoplasmic protein; hypothetical protein	complement(1268071..1268832)	Mycobacterium ulcerans Agy99	4554055
YP_905231.1	CDS	MUL_1183	NC_008611.1	1268823	1269974	R	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein	complement(1268823..1269974)	Mycobacterium ulcerans Agy99	4554056
YP_905232.1	CDS	aac	NC_008611.1	1271684	1272229	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; confers resistance to aminoglycosides (gentamicin, tobramycin, dibekacin, netilmicin, and 6'-N- ethylnetilmicin); aminoglycoside 2'-N-acetyltransferase Aac	complement(1271684..1272229)	Mycobacterium ulcerans Agy99	4554058
YP_905233.1	CDS	MUL_1186	NC_008611.1	1272256	1273125	R	cytoplasmic protein; urea amidolyase-related protein	complement(1272256..1273125)	Mycobacterium ulcerans Agy99	4554059
YP_905234.1	CDS	MUL_1187	NC_008611.1	1273141	1273812	R	cytoplasmic protein; hypothetical protein	complement(1273141..1273812)	Mycobacterium ulcerans Agy99	4554060
YP_905235.1	CDS	MUL_1188	NC_008611.1	1273925	1274917	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; thought to be involved in iron transport across the membrane (import); periplasmic iron-transport lipoprotein	complement(1273925..1274917)	Mycobacterium ulcerans Agy99	4554061
YP_905236.1	CDS	narU	NC_008611.1	1275171	1276568	D	membrane protein; involved in excretion of nitrite produced by the dissimilatory reduction of nitrate. responsible for the translocation of the substrate across the membrane.; integral membrane nitrite extrusion protein NarU	1275171..1276568	Mycobacterium ulcerans Agy99	4554062
YP_905237.1	CDS	MUL_1190	NC_008611.1	1276569	1277840	R	cytoplasmic protein; hypothetical protein	complement(1276569..1277840)	Mycobacterium ulcerans Agy99	4554063
YP_905238.1	CDS	fadD2	NC_008611.1	1277899	1279572	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	1277899..1279572	Mycobacterium ulcerans Agy99	4554064
YP_905239.1	CDS	MUL_1193	NC_008611.1	1280018	1281370	R	membrane protein; hypothetical protein	complement(1280018..1281370)	Mycobacterium ulcerans Agy99	4554065
YP_905240.1	CDS	fadE6	NC_008611.1	1281606	1283792	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE6	complement(1281606..1283792)	Mycobacterium ulcerans Agy99	4554066
YP_905241.1	CDS	serA3	NC_008611.1	1283849	1284811	R	cytoplasmic protein; involved at the first committed step in the 'phosphorylated' pathway of L-serine biosynthesis [catalytic activity: 3-phosphoglycerate + NAD(+) = 3- phosphohydroxypyruvate + NADH]; D-3-phosphoglycerate dehydrogenase	complement(1283849..1284811)	Mycobacterium ulcerans Agy99	4554067
YP_905242.1	CDS	MUL_1196	NC_008611.1	1284808	1285941	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(1284808..1285941)	Mycobacterium ulcerans Agy99	4554068
YP_905243.1	CDS	MUL_1197	NC_008611.1	1285943	1286551	R	cytoplasmic protein; could be involved in transcriptional mechanism.; transcriptional regulatory protein	complement(1285943..1286551)	Mycobacterium ulcerans Agy99	4554069
YP_905244.1	CDS	MUL_1198	NC_008611.1	1286642	1287223	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; hypothetical protein	1286642..1287223	Mycobacterium ulcerans Agy99	4554070
YP_905245.1	CDS	MUL_1199	NC_008611.1	1287230	1287778	D	membrane protein; hypothetical protein	1287230..1287778	Mycobacterium ulcerans Agy99	4554071
YP_905246.1	CDS	MUL_1200	NC_008611.1	1287732	1288388	R	cytoplasmic protein; could be involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(1287732..1288388)	Mycobacterium ulcerans Agy99	4554407
YP_905247.1	CDS	MUL_1201	NC_008611.1	1288513	1289415	D	hypothetical protein	1288513..1289415	Mycobacterium ulcerans Agy99	4554408
YP_905248.1	CDS	MUL_1202	NC_008611.1	1289688	1291244	D	PPE3; secreted protein; PPE family protein	1289688..1291244	Mycobacterium ulcerans Agy99	4554409
YP_905249.1	CDS	MUL_5109	NC_008611.1	1292296	1292520	D	cytoplasmic protein; hypothetical protein	1292296..1292520	Mycobacterium ulcerans Agy99	4554411
YP_905250.1	CDS	MUL_1204	NC_008611.1	1292627	1294489	D	Detected in the cytoplasmic and the membrane fraction by 2D-LC-MS/MS.; cytoplasmic protein; hypothetical protein	1292627..1294489	Mycobacterium ulcerans Agy99	4554412
YP_905251.1	CDS	MUL_1205	NC_008611.1	1294486	1296087	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1294486..1296087	Mycobacterium ulcerans Agy99	4554413
YP_905252.1	CDS	MUL_1206	NC_008611.1	1296084	1300085	D	membrane protein; hypothetical protein	1296084..1300085	Mycobacterium ulcerans Agy99	4554414
YP_905253.1	CDS	MUL_1207	NC_008611.1	1300110	1300418	D	PE5; Detected in the secreted fraction by proteomics.; secreted protein; PE family protein	1300110..1300418	Mycobacterium ulcerans Agy99	4554415
YP_905254.1	CDS	MUL_1208	NC_008611.1	1300421	1301974	D	PPE4; membrane protein; PPE family protein	1300421..1301974	Mycobacterium ulcerans Agy99	4554416
YP_905255.1	CDS	esxG	NC_008611.1	1302011	1302304	D	secreted protein; EsaT-6 like protein EsxG	1302011..1302304	Mycobacterium ulcerans Agy99	4554417
YP_905256.1	CDS	esxH	NC_008611.1	1302333	1302623	D	membrane protein; EsaT-6 like protein EsxH	1302333..1302623	Mycobacterium ulcerans Agy99	4554418
YP_905257.1	CDS	MUL_1211	NC_008611.1	1302632	1303528	D	Detected in the membrane fraction by proteomics.; cytoplasmic protein; hypothetical protein	1302632..1303528	Mycobacterium ulcerans Agy99	4554419
YP_905258.1	CDS	MUL_1212	NC_008611.1	1303600	1305018	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	1303600..1305018	Mycobacterium ulcerans Agy99	4554420
YP_905259.1	CDS	mycP3	NC_008611.1	1305015	1306439	D	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasm by proteomics.; membrane protein; thought to have proteolytic activity.; membrane-anchored mycosin MycP3	1305015..1306439	Mycobacterium ulcerans Agy99	4554421
YP_905260.1	CDS	MUL_1214	NC_008611.1	1306492	1307442	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	1306492..1307442	Mycobacterium ulcerans Agy99	4554422
YP_905261.1	CDS	MUL_1215	NC_008611.1	1307429	1308649	R	membrane protein; hypothetical protein	complement(1307429..1308649)	Mycobacterium ulcerans Agy99	4554423
YP_905262.1	CDS	tam	NC_008611.1	1308806	1309597	D	catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase	1308806..1309597	Mycobacterium ulcerans Agy99	4554424
YP_905263.1	CDS	MUL_1217	NC_008611.1	1309615	1310970	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; sulfatase	complement(1309615..1310970)	Mycobacterium ulcerans Agy99	4554425
YP_905264.1	CDS	MUL_1218	NC_008611.1	1311079	1311729	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(1311079..1311729)	Mycobacterium ulcerans Agy99	4554426
YP_905265.1	CDS	MUL_1219	NC_008611.1	1311722	1311922	R	Detected in the membrane fraction by proteomics; membrane protein; membrane protein	complement(1311722..1311922)	Mycobacterium ulcerans Agy99	4554427
YP_905266.1	CDS	MUL_1220	NC_008611.1	1311915	1312172	D	membrane protein; hypothetical protein	1311915..1312172	Mycobacterium ulcerans Agy99	4554428
YP_905267.1	CDS	MUL_1221	NC_008611.1	1312156	1312638	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(1312156..1312638)	Mycobacterium ulcerans Agy99	4554429
YP_905268.1	CDS	MUL_1222	NC_008611.1	1312695	1313363	D	membrane protein; integral membrane protein	1312695..1313363	Mycobacterium ulcerans Agy99	4554430
YP_905269.1	CDS	MUL_1223	NC_008611.1	1313469	1314125	D	secreted protein; hypothetical protein	1313469..1314125	Mycobacterium ulcerans Agy99	4554431
YP_905270.1	CDS	MUL_1224	NC_008611.1	1314134	1314640	R	cytoplasmic protein; hypothetical protein	complement(1314134..1314640)	Mycobacterium ulcerans Agy99	4554432
YP_905271.1	CDS	MUL_1225	NC_008611.1	1314700	1315929	D	cytoplasmic protein; hypothetical protein	1314700..1315929	Mycobacterium ulcerans Agy99	4554433
YP_905272.1	CDS	MUL_1226	NC_008611.1	1316082	1317962	D	membrane protein; hypothetical protein	1316082..1317962	Mycobacterium ulcerans Agy99	4554434
YP_905273.1	CDS	MUL_1227	NC_008611.1	1318184	1319542	D	membrane protein; hypothetical protein	1318184..1319542	Mycobacterium ulcerans Agy99	4554435
YP_905274.1	CDS	MUL_1231	NC_008611.1	1329776	1330147	D	cytoplasmic protein; hypothetical protein	1329776..1330147	Mycobacterium ulcerans Agy99	4554437
YP_905275.1	CDS	MUL_1233	NC_008611.1	1331902	1333845	R	cytoplasmic protein; function unknown, but seems involved in metabolism of small branched-chain fatty acids and macrolide antibiotic production. catalyses the alpha, beta- dehydrogenetion of acyl-CoA esters and transfer electrons to ETF, the electron transfer protein.; acyl-CoA dehydrogenase	complement(1331902..1333845)	Mycobacterium ulcerans Agy99	4554439
YP_905276.1	CDS	MUL_1234	NC_008611.1	1334046	1334705	D	membrane protein	1334046..1334705	Mycobacterium ulcerans Agy99	4554440
YP_905277.1	CDS	MUL_1236	NC_008611.1	1335782	1336828	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1335782..1336828	Mycobacterium ulcerans Agy99	4554442
YP_905278.1	CDS	MUL_1237	NC_008611.1	1337211	1339733	R	membrane protein; thought to be involved in active transport of undeterminated substrate (possibly lipooligosaccharide) across the membrane. responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; transmembrane ABC transporter ATP-binding protein	complement(1337211..1339733)	Mycobacterium ulcerans Agy99	4554443
YP_905279.1	CDS	MUL_1238	NC_008611.1	1339885	1340361	R	cytoplasmic protein; hypothetical protein	complement(1339885..1340361)	Mycobacterium ulcerans Agy99	4554444
YP_905280.1	CDS	MUL_1239	NC_008611.1	1340480	1342552	D	membrane protein; probably involved in active transport accross the membrane. thought to be responsible for energy coupling to the transport system and the translocation of the substrate across the membrane.; transmembrane ATP-binding protein ABC transorter	1340480..1342552	Mycobacterium ulcerans Agy99	4554509
YP_905281.1	CDS	MUL_1240	NC_008611.1	1342549	1343409	D	membrane protein; hypothetical protein	1342549..1343409	Mycobacterium ulcerans Agy99	4554510
YP_905282.1	CDS	MUL_1241	NC_008611.1	1343406	1343858	R	cytoplasmic protein; involved in transcriptional mechanism.; AsnC family transcriptional regulator	complement(1343406..1343858)	Mycobacterium ulcerans Agy99	4554511
YP_905283.1	CDS	MUL_1242	NC_008611.1	1343982	1344857	D	cytoplasmic protein; hypothetical protein	1343982..1344857	Mycobacterium ulcerans Agy99	4554512
YP_905284.1	CDS	rocD	NC_008611.1	1344854	1346098	D	cytoplasmic protein; involved in arginine metabolism [catalytic activity: L-ornithine + a 2-OXO acid = L-glutamate 5- semialdehyde + an L-amino acid]; ornithine aminotransferase RocD1 and RocD2	1344854..1346098	Mycobacterium ulcerans Agy99	4554513
YP_905285.1	CDS	rocE	NC_008611.1	1346128	1347597	D	membrane protein; thought to be involved in transport of cationic amino acid (especially arginine and ornithine) across the membrane. responsible for the translocation of the substrate across the membrane.; cationic amino acid transport integral membrane protein RocE	1346128..1347597	Mycobacterium ulcerans Agy99	4554514
YP_905286.1	CDS	MUL_1245	NC_008611.1	1347594	1348466	D	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; hypothetical protein	1347594..1348466	Mycobacterium ulcerans Agy99	4554515
YP_905287.1	CDS	uspC	NC_008611.1	1348497	1349825	R	membrane protein; thought to be involved in active transport of sugar across the membrane (import); periplasmic sugar-binding lipoprotein UspC	complement(1348497..1349825)	Mycobacterium ulcerans Agy99	4554516
YP_905288.1	CDS	uspB	NC_008611.1	1349822	1350628	R	secreted protein; thought to be involved in active transport of sugar across the membrane (import) responsible for the translocation of the substrate across the membrane.; sugar-transport integral membrane protein ABC transporter UspB	complement(1349822..1350628)	Mycobacterium ulcerans Agy99	4554517
YP_905289.1	CDS	uspA	NC_008611.1	1350648	1351520	R	Also detected in the cytoplasm by proteomics.; membrane protein; thought to be involved in active transport of sugar across the membrane (import) responsible for the translocation of the substrate across the membrane.; sugar-transport integral membrane protein ABC transporter UspA	complement(1350648..1351520)	Mycobacterium ulcerans Agy99	4554518
YP_905290.1	CDS	MUL_1249	NC_008611.1	1351555	1353072	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS) Two isoforms were also detected in the cytoplasm.; membrane protein; hypothetical protein	1351555..1353072	Mycobacterium ulcerans Agy99	4554519
YP_905291.1	CDS	MUL_1250	NC_008611.1	1353069	1354442	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; hypothetical protein	1353069..1354442	Mycobacterium ulcerans Agy99	4554520
YP_905292.1	CDS	MUL_1252	NC_008611.1	1355342	1356115	D	secreted protein; hypothetical protein	1355342..1356115	Mycobacterium ulcerans Agy99	4554522
YP_905293.1	CDS	MUL_1253	NC_008611.1	1356283	1356591	D	cytoplasmic protein; hypothetical protein	1356283..1356591	Mycobacterium ulcerans Agy99	4554523
YP_905294.1	CDS	MUL_1254	NC_008611.1	1356588	1359200	R	membrane protein; metal cation-transporting ATPase; possibly catalyzes the transport of a undeterminated metal cation with the hydrolyse of ATP [catalytic activity: ATP + H(2)O + undeterminated metal cation(in) = ADP + phosphate + undeterminated metal cation(out)]; metal cation transporter p-type ATPase a	complement(1356588..1359200)	Mycobacterium ulcerans Agy99	4554524
YP_905295.1	CDS	MUL_1255	NC_008611.1	1359441	1359968	D	cytoplasmic protein; hypothetical protein	1359441..1359968	Mycobacterium ulcerans Agy99	4554525
YP_905296.1	CDS	MUL_1256	NC_008611.1	1360070	1360504	R	cytoplasmic protein; hypothetical protein	complement(1360070..1360504)	Mycobacterium ulcerans Agy99	4554526
YP_905297.1	CDS	MUL_1259	NC_008611.1	1361169	1361369	D	cytoplasmic protein; function unknown.; hypothetical protein	1361169..1361369	Mycobacterium ulcerans Agy99	4552000
YP_905298.1	CDS	MUL_1260	NC_008611.1	1361754	1361861	D	cytoplasmic protein; hypothetical protein	1361754..1361861	Mycobacterium ulcerans Agy99	4552001
YP_905299.1	CDS	MUL_1261	NC_008611.1	1362331	1363035	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	1362331..1363035	Mycobacterium ulcerans Agy99	4552002
YP_905300.1	CDS	MUL_1262	NC_008611.1	1363060	1363377	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	1363060..1363377	Mycobacterium ulcerans Agy99	4552003
YP_905301.1	CDS	MUL_1263	NC_008611.1	1363529	1364863	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	1363529..1364863	Mycobacterium ulcerans Agy99	4552004
YP_905302.1	CDS	MUL_1264	NC_008611.1	1365078	1365560	D	cytoplasmic protein; contains PTPS, 6-pyruvoyl tetrahydropterin synthase domain. 6-pyruvoyl tetrahydrobiopterin synthase catalyses the conversion of dihydroneopterin triphosphate to 6- pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. the functional enzyme is a hexamer of identical subunits.; 6-pyruvoyl tetrahydrobiopterin synthase	1365078..1365560	Mycobacterium ulcerans Agy99	4552005
YP_905303.1	CDS	MUL_1265	NC_008611.1	1366310	1367266	D	cytoplasmic protein; hypothetical protein	1366310..1367266	Mycobacterium ulcerans Agy99	4552006
YP_905304.1	CDS	MUL_1266	NC_008611.1	1367290	1367745	D	cytoplasmic protein; hypothetical protein	1367290..1367745	Mycobacterium ulcerans Agy99	4552007
YP_905305.1	CDS	MUL_1267	NC_008611.1	1367771	1369105	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(1367771..1369105)	Mycobacterium ulcerans Agy99	4552008
YP_905306.1	CDS	MUL_1268	NC_008611.1	1369347	1370081	D	membrane protein; function unknown, predicted hydrolase (had superfamily) domain.; hypothetical protein	1369347..1370081	Mycobacterium ulcerans Agy99	4552009
YP_905307.1	CDS	MUL_1269	NC_008611.1	1370187	1370921	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, in general, cation channels are transport proteins responsible for the movement of cations through the membrane.; ion transport protein	1370187..1370921	Mycobacterium ulcerans Agy99	4552010
YP_905308.1	CDS	MUL_1270	NC_008611.1	1370681	1371280	R	Potential pseudogene due to a point mutation, removing a stop codon and now the CDS overlaps the C-term of a CDS on the opposite strand.; membrane protein; transmembrane protein	complement(1370681..1371280)	Mycobacterium ulcerans Agy99	4552011
YP_905309.1	CDS	MUL_1271	NC_008611.1	1371277	1371654	R	membrane protein; transmembrane protein	complement(1371277..1371654)	Mycobacterium ulcerans Agy99	4552012
YP_905310.1	CDS	MUL_1273	NC_008611.1	1371853	1372251	R	cytoplasmic protein; hypothetical protein	complement(1371853..1372251)	Mycobacterium ulcerans Agy99	4552013
YP_905311.1	CDS	lppN	NC_008611.1	1372248	1372781	R	secreted protein; lipoprotein LppN	complement(1372248..1372781)	Mycobacterium ulcerans Agy99	4552014
YP_905312.1	CDS	MUL_1275	NC_008611.1	1372818	1373414	R	cytoplasmic protein; hypothetical protein	complement(1372818..1373414)	Mycobacterium ulcerans Agy99	4552015
YP_905313.1	CDS	MUL_1277	NC_008611.1	1374417	1374734	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(1374417..1374734)	Mycobacterium ulcerans Agy99	4550118
YP_905314.1	CDS	MUL_1278	NC_008611.1	1374759	1375463	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(1374759..1375463)	Mycobacterium ulcerans Agy99	4550119
YP_905315.1	CDS	MUL_1280	NC_008611.1	1376289	1376915	D	cytoplasmic protein; hypothetical protein	1376289..1376915	Mycobacterium ulcerans Agy99	4550120
YP_905316.1	CDS	aofH_1	NC_008611.1	1376924	1378297	R	Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; possibly catalyzes the oxidative deamination: oxidize on primary amines, and perhaps on secondary and tertiary amines [catalytic activity: RCH(2)NH(2) + H(2)O + O(2) = RchO + NH(3) + H(2)O(2)] must have important function in metabolism. supposed involved in stationary- phase survival.; flavin-containing monoamine oxidase AofH	complement(1376924..1378297)	Mycobacterium ulcerans Agy99	4550121
YP_905317.1	CDS	cyp124A1	NC_008611.1	1378331	1379632	R	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 124A1, Cyp124A1	complement(1378331..1379632)	Mycobacterium ulcerans Agy99	4550122
YP_905318.1	CDS	MUL_1286	NC_008611.1	1383567	1383854	R	cytoplasmic protein; function unknown.; hypothetical protein	complement(1383567..1383854)	Mycobacterium ulcerans Agy99	4550126
YP_905319.1	CDS	MUL_1287	NC_008611.1	1383949	1385019	R	cytoplasmic protein; hypothetical protein	complement(1383949..1385019)	Mycobacterium ulcerans Agy99	4550127
YP_905320.1	CDS	MUL_1288	NC_008611.1	1385057	1386010	R	Detected in the membrane and cytoplamic fractions by proteomics.; cytoplasmic protein; oxidoreduction; short chain dehydrogenase	complement(1385057..1386010)	Mycobacterium ulcerans Agy99	4550128
YP_905321.1	CDS	MUL_1289	NC_008611.1	1386093	1387595	D	secreted protein; function unknown; thought to be involved in lipid metabolism.; hypothetical protein	1386093..1387595	Mycobacterium ulcerans Agy99	4550129
YP_905322.1	CDS	MUL_1290	NC_008611.1	1387592	1388341	D	membrane protein; function unknown.; hypothetical protein	1387592..1388341	Mycobacterium ulcerans Agy99	4550130
YP_905323.1	CDS	MUL_1291	NC_008611.1	1388404	1389009	R	cytoplasmic protein; hypothetical protein	complement(1388404..1389009)	Mycobacterium ulcerans Agy99	4550131
YP_905324.1	CDS	adhE2	NC_008611.1	1389027	1390112	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); secreted protein; oxido-reduction; zinc-dependent alcohol dehydrogenase AdhE2	complement(1389027..1390112)	Mycobacterium ulcerans Agy99	4550132
YP_905325.1	CDS	MUL_1293	NC_008611.1	1390243	1391313	D	cytoplasmic protein; possibly involved in transcriptional regulation; transcriptional regulatory protein	1390243..1391313	Mycobacterium ulcerans Agy99	4550133
YP_905326.1	CDS	MUL_1294	NC_008611.1	1391326	1392144	D	cytoplasmic protein; hypothetical protein	1391326..1392144	Mycobacterium ulcerans Agy99	4550134
YP_905327.1	CDS	MUL_1295	NC_008611.1	1392298	1392810	D	cytoplasmic protein; hypothetical protein	1392298..1392810	Mycobacterium ulcerans Agy99	4550135
YP_905328.1	CDS	MUL_1297	NC_008611.1	1393458	1394393	R	involved in the biosynthesis of phosphatidylinositol mannosides (PIMs); the enzyme from Mycobacterium tuberculosis can phosphorylate a variety of amphipathic lipids; diacylglycerol kinase	complement(1393458..1394393)	Mycobacterium ulcerans Agy99	4550710
YP_905329.1	CDS	MUL_1298	NC_008611.1	1394417	1395997	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; electron acceptor; flavoprotein	complement(1394417..1395997)	Mycobacterium ulcerans Agy99	4550711
YP_905330.1	CDS	MUL_1299	NC_008611.1	1396045	1396614	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; possibly involved in transcriptional regulation; transcriptional regulatory protein	1396045..1396614	Mycobacterium ulcerans Agy99	4550712
YP_905331.1	CDS	glpD1	NC_008611.1	1396614	1398149	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in aerobic respiration and oxydation of glycerol. reduces an acceptor and generates glycerone phosphate from SN-glycerol 3-phosphate. possibly play a role in metabolism of riboflavin, fad,FMN [catalytic activity: SN-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor]; glycerol-3-phosphate dehydrogenase	1396614..1398149	Mycobacterium ulcerans Agy99	4550713
YP_905332.1	CDS	MUL_1301	NC_008611.1	1398230	1399045	R	cytoplasmic protein; hypothetical protein	complement(1398230..1399045)	Mycobacterium ulcerans Agy99	4550714
YP_905333.1	CDS	accD6	NC_008611.1	1399243	1400664	R	Detected in the membrane fraction by proteomics; membrane protein; involved in fatty acid biosynthesis (mycolic acids synthesis) [catalytic activity: ATP + propionyl-CoA + CO(2) + H(2)O = ADP + orthophosphate + methylmalonyl- CoA]; acetyl/propionyl CoA carboxylase subunit beta	complement(1399243..1400664)	Mycobacterium ulcerans Agy99	4550715
YP_905334.1	CDS	kasB	NC_008611.1	1400702	1401955	R	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II	complement(1400702..1401955)	Mycobacterium ulcerans Agy99	4550716
YP_905335.1	CDS	kasA	NC_008611.1	1402037	1403287	R	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II	complement(1402037..1403287)	Mycobacterium ulcerans Agy99	4550717
YP_905336.1	CDS	acpP	NC_008611.1	1403284	1403631	R	carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein	complement(1403284..1403631)	Mycobacterium ulcerans Agy99	4550718
YP_905337.1	CDS	fabD	NC_008611.1	1403704	1404612	R	membrane protein; catalyzes malonyl-CoA-acp transacylase (McaT) activity using holo-AcpM as substrate for transacylation [catalytic activity: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein]; malonyl CoA-acyl carrier protein transacylase FabD	complement(1403704..1404612)	Mycobacterium ulcerans Agy99	4550719
YP_905338.1	CDS	MUL_1307	NC_008611.1	1404774	1406084	R	cytoplasmic protein; hypothetical protein	complement(1404774..1406084)	Mycobacterium ulcerans Agy99	4550720
YP_905339.1	CDS	aceE	NC_008611.1	1406218	1409007	R	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1	complement(1406218..1409007)	Mycobacterium ulcerans Agy99	4550721
YP_905340.1	CDS	MUL_1309	NC_008611.1	1409192	1409794	D	N-term truncated (missing first 69aa) wrt to M. tuberculosis; membrane protein; hypothetical protein	1409192..1409794	Mycobacterium ulcerans Agy99	4550722
YP_905341.1	CDS	MUL_1310	NC_008611.1	1409851	1410297	D	cytoplasmic protein; hypothetical protein	1409851..1410297	Mycobacterium ulcerans Agy99	4550723
YP_905342.1	CDS	ahpE	NC_008611.1	1410297	1410758	D	cytoplasmic protein; detoxification of organic peroxides.; peroxiredoxin AhpE	1410297..1410758	Mycobacterium ulcerans Agy99	4550724
YP_905343.1	CDS	MUL_1313	NC_008611.1	1410897	1412447	R	cytoplasmic protein; hypothetical protein	complement(1410897..1412447)	Mycobacterium ulcerans Agy99	4550726
YP_905344.1	CDS	MUL_1315	NC_008611.1	1413009	1413815	D	membrane protein; function unknown, possibly involved in transport of metal ions across the membrane.; hypothetical protein	1413009..1413815	Mycobacterium ulcerans Agy99	4551377
YP_905345.1	CDS	MUL_1316	NC_008611.1	1413836	1414651	R	cytoplasmic protein; hypothetical protein	complement(1413836..1414651)	Mycobacterium ulcerans Agy99	4551378
YP_905346.1	CDS	cobD	NC_008611.1	1414765	1415706	D	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein	1414765..1415706	Mycobacterium ulcerans Agy99	4551379
YP_905347.1	CDS	MUL_1318	NC_008611.1	1415688	1416512	R	membrane protein; function unknown: may be involved in the ability to survive in macrophages.; transmembrane protein	complement(1415688..1416512)	Mycobacterium ulcerans Agy99	4551380
YP_905348.1	CDS	ptpA	NC_008611.1	1416512	1417006	R	cytoplasmic protein; involved in signal transduction (via dephosphorylation) can dephosphorylated in vitro the phosphotyrosine residue of myelin basic protein (MBP) at ph 7.0 [catalytic activity: protein tyrosine phosphate + H(2)O = protein tyrosine + phosphate.; phosphotyrosine protein phosphatase PtpA	complement(1416512..1417006)	Mycobacterium ulcerans Agy99	4551381
YP_905349.1	CDS	MUL_1320	NC_008611.1	1416999	1417406	R	cytoplasmic protein; hypothetical protein	complement(1416999..1417406)	Mycobacterium ulcerans Agy99	4551382
YP_905350.1	CDS	cobC	NC_008611.1	1417906	1418961	D	cytoplasmic protein; involved in cobalamin biosynthesis; hypothetical protein	1417906..1418961	Mycobacterium ulcerans Agy99	4551383
YP_905351.1	CDS	MUL_1322	NC_008611.1	1418958	1420094	D	cytoplasmic protein; hypothetical protein	1418958..1420094	Mycobacterium ulcerans Agy99	4551384
YP_905352.1	CDS	MUL_1323	NC_008611.1	1420117	1420854	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	1420117..1420854	Mycobacterium ulcerans Agy99	4551385
YP_905353.1	CDS	MUL_1324	NC_008611.1	1420851	1421975	D	cytoplasmic protein; bifunctional RNase H/acid phosphatase	1420851..1421975	Mycobacterium ulcerans Agy99	4551386
YP_905354.1	CDS	MUL_1328	NC_008611.1	1426446	1428038	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS; cytoplasmic protein; hypothetical protein	complement(1426446..1428038)	Mycobacterium ulcerans Agy99	4551390
YP_905355.1	CDS	MUL_1329	NC_008611.1	1428303	1428623	D	membrane protein; hypothetical protein	1428303..1428623	Mycobacterium ulcerans Agy99	4551391
YP_905356.1	CDS	panB	NC_008611.1	1428631	1429524	R	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase	complement(1428631..1429524)	Mycobacterium ulcerans Agy99	4551392
YP_905357.1	CDS	MUL_1332	NC_008611.1	1431122	1432678	D	secreted protein; function unknown; thought to hydrolyze peptides and/or proteins.; exported protease	1431122..1432678	Mycobacterium ulcerans Agy99	4554072
YP_905358.1	CDS	ctaD_1	NC_008611.1	1432822	1434558	D	membrane protein; cytochrome C oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. electrons originating in cytochrome C are transferred via the copper a center of subunit 2 and HemE a of subunit 1 to the bimetallic center formed by HemE A3 and copper B [catalytic activity: 4 ferrocytochrome C + O(2) = 2 H(2)O + 4 ferricytochrome C]; cytochrome C oxidase polypeptide I CtaD	1432822..1434558	Mycobacterium ulcerans Agy99	4554073
YP_905359.1	CDS	MUL_1334	NC_008611.1	1434619	1436187	D	secreted protein; function unknown; thought to hydrolyze peptides and/or proteins.; exported protease	1434619..1436187	Mycobacterium ulcerans Agy99	4554074
YP_905360.1	CDS	glnA2	NC_008611.1	1436277	1437617	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in glutamine biosynthesis [catalytic activity: ATP + L-glutamate + NH(3) = ADP + glutamine + orthophosphate]; glutamine synthetase	1436277..1437617	Mycobacterium ulcerans Agy99	4554075
YP_905361.1	CDS	glnE	NC_008611.1	1437688	1440675	D	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase	1437688..1440675	Mycobacterium ulcerans Agy99	4554076
YP_905362.1	CDS	MUL_1338	NC_008611.1	1441534	1442181	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hypothetical protein	1441534..1442181	Mycobacterium ulcerans Agy99	4554078
YP_905363.1	CDS	MUL_1339	NC_008611.1	1442226	1444406	R	membrane protein; function unknown. has fibronectin-binding activity (could thus mediate bacterial attachment to host cells) thought to be expressed during infection.; PE-PGRS family protein	complement(1442226..1444406)	Mycobacterium ulcerans Agy99	4554079
YP_905364.1	CDS	glnA1	NC_008611.1	1444670	1446106	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; involved in glutamine biosynthesis [catalytic activity: ATP + L-glutamate + NH(3) = ADP + glutamine + orthophosphate]; glutamine synthetase GlnA1	complement(1444670..1446106)	Mycobacterium ulcerans Agy99	4554080
YP_905365.1	CDS	MUL_1341	NC_008611.1	1446349	1446771	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1446349..1446771	Mycobacterium ulcerans Agy99	4554081
YP_905366.1	CDS	MUL_1342	NC_008611.1	1446822	1447574	R	membrane protein; transmembrane protein	complement(1446822..1447574)	Mycobacterium ulcerans Agy99	4554082
YP_905367.1	CDS	lipA	NC_008611.1	1447602	1448576	R	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase	complement(1447602..1448576)	Mycobacterium ulcerans Agy99	4554083
YP_905368.1	CDS	lipB	NC_008611.1	1448573	1449298	R	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B	complement(1448573..1449298)	Mycobacterium ulcerans Agy99	4554084
YP_905369.1	CDS	MUL_1345	NC_008611.1	1449570	1451300	D	membrane protein; thought to be involved in active transport of drugs across the membrane (export): multidrugs resistance by an export mechanism. responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; drugs-transport transmembrane ATP-binding protein ABC transporter	1449570..1451300	Mycobacterium ulcerans Agy99	4554085
YP_905370.1	CDS	MUL_1347	NC_008611.1	1453681	1454073	D	membrane protein; hypothetical protein	1453681..1454073	Mycobacterium ulcerans Agy99	4554087
YP_905371.1	CDS	ilvB1_2	NC_008611.1	1454098	1455774	R	membrane protein; involved in valine and isoleucine biosynthesis (at the first step) [catalytic activity: 2-acetolactate + CO(2) = 2 pyruvate]; acetolactate synthase large subunit IlvB	complement(1454098..1455774)	Mycobacterium ulcerans Agy99	4554088
YP_905372.1	CDS	MUL_1349	NC_008611.1	1455774	1456433	R	cytoplasmic protein; function unknown, may have methyltransferase activity; hypothetical protein	complement(1455774..1456433)	Mycobacterium ulcerans Agy99	4554089
YP_905373.1	CDS	wrbA	NC_008611.1	1457336	1458064	R	cytoplasmic protein; multimeric flavodoxin WrbA	complement(1457336..1458064)	Mycobacterium ulcerans Agy99	4551949
YP_905374.1	CDS	MUL_1352	NC_008611.1	1458615	1458842	R	cytoplasmic protein; hypothetical protein	complement(1458615..1458842)	Mycobacterium ulcerans Agy99	4551950
YP_905375.1	CDS	MUL_1353	NC_008611.1	1458889	1459476	R	cytoplasmic protein; the sigma factor is an initiation factor that promotes attachment of the RNA polymerase to specific initiation sites and then is released.; alternative RNA polymerase sigma factor	complement(1458889..1459476)	Mycobacterium ulcerans Agy99	4551951
YP_905376.1	CDS	MUL_1354	NC_008611.1	1459677	1460213	D	cytoplasmic protein; hypothetical protein	1459677..1460213	Mycobacterium ulcerans Agy99	4551952
YP_905377.1	CDS	MUL_1355	NC_008611.1	1460336	1460548	R	secreted protein; hypothetical protein	complement(1460336..1460548)	Mycobacterium ulcerans Agy99	4551953
YP_905378.1	CDS	MUL_1357	NC_008611.1	1462775	1464109	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	1462775..1464109	Mycobacterium ulcerans Agy99	4551955
YP_905379.1	CDS	MUL_1359	NC_008611.1	1466235	1467281	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1466235..1467281	Mycobacterium ulcerans Agy99	4551957
YP_905380.1	CDS	MUL_1363	NC_008611.1	1469784	1471004	D	membrane protein; PE-PGRS family protein	1469784..1471004	Mycobacterium ulcerans Agy99	4551960
YP_905381.1	CDS	add	NC_008611.1	1471013	1472101	R	catalyzes the formation of inosine from adenosine; adenosine deaminase	complement(1471013..1472101)	Mycobacterium ulcerans Agy99	4551961
YP_905382.1	CDS	deoA	NC_008611.1	1472098	1473399	R	Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase	complement(1472098..1473399)	Mycobacterium ulcerans Agy99	4552552
YP_905383.1	CDS	cdd	NC_008611.1	1473396	1473794	R	Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase	complement(1473396..1473794)	Mycobacterium ulcerans Agy99	4552553
YP_905384.1	CDS	sdhC	NC_008611.1	1474082	1474420	D	membrane protein; involved in tricarboxylic acid cycle. mono-heme cytochrome of the succinate dehydrogenase complex.; succinate dehydrogenase (cytochrome B-556 subunit) SdhC	1474082..1474420	Mycobacterium ulcerans Agy99	4552554
YP_905385.1	CDS	sdhD	NC_008611.1	1474462	1474884	D	membrane protein; involved in tricarboxylic acid cycle. putative hydrophobic component of the succinate dehydrogenase complex. could be required to anchor the catalytic components to the cytoplasmic membrane.; succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD	1474462..1474884	Mycobacterium ulcerans Agy99	4552555
YP_905386.1	CDS	sdhA	NC_008611.1	1474913	1476667	D	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit	1474913..1476667	Mycobacterium ulcerans Agy99	4552556
YP_905387.1	CDS	sdhB	NC_008611.1	1476673	1477479	D	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit	1476673..1477479	Mycobacterium ulcerans Agy99	4552557
YP_905388.1	CDS	MUL_1371	NC_008611.1	1477801	1478118	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(1477801..1478118)	Mycobacterium ulcerans Agy99	4552558
YP_905389.1	CDS	MUL_1372	NC_008611.1	1478143	1478847	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(1478143..1478847)	Mycobacterium ulcerans Agy99	4552559
YP_905390.1	CDS	MUL_1373	NC_008611.1	1479341	1479787	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	complement(1479341..1479787)	Mycobacterium ulcerans Agy99	4552560
YP_905391.1	CDS	xthA	NC_008611.1	1479931	1480725	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; involved in base excision repair. apurinic- apyrimidinic endonuclease. supposed to remove the damaged DNA at cytosines and guanines by cleaving at the 3' side of the ap site by a beta-elimination reaction. possibly exhibites 3'-5'-exonuclease, 3'-phosphomonoesterase, 3'- repair diesterase and ribonuclease H activities [catalytic activity: degradation of double-stranded DNA. it acts progressively in a 3'- to 5'-direction, releasing 5'- phosphomononucleotides]; exodeoxyribonuclease III protein XthA	complement(1479931..1480725)	Mycobacterium ulcerans Agy99	4552561
YP_905392.1	CDS	def	NC_008611.1	1481661	1482254	R	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase	complement(1481661..1482254)	Mycobacterium ulcerans Agy99	4552563
YP_905393.1	CDS	MUL_1377	NC_008611.1	1482288	1482812	D	cytoplasmic protein; hypothetical protein	1482288..1482812	Mycobacterium ulcerans Agy99	4552564
YP_905394.1	CDS	MUL_1378	NC_008611.1	1482868	1483359	D	Detected in the membrane fraction and secreted fractions by proteomics. (2D-LC-MS/MS); membrane protein; tuberculin-like protein	1482868..1483359	Mycobacterium ulcerans Agy99	4552565
YP_905395.1	CDS	sodC	NC_008611.1	1483432	1484148	D	Detected in the membrane fraction by proteomics; secreted protein; destroys radicals which are normally produced within the cells and are toxic to biological systems [catalytic activity: 2 superoxide + 2 H+ = O2 + H2O2]; periplasmic superoxide dismutase [Cu-Zn] SodC	1483432..1484148	Mycobacterium ulcerans Agy99	4552566
YP_905396.1	CDS	MUL_1380	NC_008611.1	1484102	1485280	D	ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase	1484102..1485280	Mycobacterium ulcerans Agy99	4552567
YP_905397.1	CDS	MUL_1381	NC_008611.1	1485385	1486047	R	cytoplasmic protein; involved in transcriptional mechanism.; GntR family transcriptional regulator	complement(1485385..1486047)	Mycobacterium ulcerans Agy99	4552568
YP_905398.1	CDS	MUL_1382	NC_008611.1	1486184	1487470	D	membrane protein; function unknown, possibly involved in inorganic ion transport.; MFS transporter	1486184..1487470	Mycobacterium ulcerans Agy99	4552569
YP_905399.1	CDS	MUL_1383	NC_008611.1	1487608	1488264	D	cytoplasmic protein; hypothetical protein	1487608..1488264	Mycobacterium ulcerans Agy99	4552570
YP_905400.1	CDS	MUL_1384	NC_008611.1	1488271	1490448	R	membrane protein; ATPase; possibly catalyzes the transport of undeterminated substrate with hydrolyse of ATP [catalytic activity: ATP + H(2)O + undeterminated substrate(in) = ADP + phosphate + undeterminated substrate(out)]; ATPase	complement(1488271..1490448)	Mycobacterium ulcerans Agy99	4552534
YP_905401.1	CDS	pssA	NC_008611.1	1490445	1491320	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in phospholipid biosynthesis. generates phosphatidylserine [catalytic activity: CDP-diacylglycerol + L-serine = CMP + O-SN-phosphatidyl-L-serine]; CDP-diacylglycerol--serine O-phosphatidyltransferase	complement(1490445..1491320)	Mycobacterium ulcerans Agy99	4552535
YP_905402.1	CDS	psd	NC_008611.1	1491317	1492039	R	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase	complement(1491317..1492039)	Mycobacterium ulcerans Agy99	4552536
YP_905403.1	CDS	MUL_1388	NC_008611.1	1494204	1495250	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(1494204..1495250)	Mycobacterium ulcerans Agy99	4552538
YP_905404.1	CDS	moeA2	NC_008611.1	1495965	1497182	R	cytoplasmic protein; involved in molybdenum cofactor biosynthesis: involved in the biosynthesis of a demolybdo-cofactor (molybdopterin), necessary for molybdo-enzymes (by similarity); molybdopterin biosynthesis protein MoeA2	complement(1495965..1497182)	Mycobacterium ulcerans Agy99	4552539
YP_905405.1	CDS	MUL_1391	NC_008611.1	1497201	1498139	R	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short chain dehydrogenase	complement(1497201..1498139)	Mycobacterium ulcerans Agy99	4552540
YP_905406.1	CDS	MUL_1392	NC_008611.1	1498186	1498707	R	cytoplasmic protein; hypothetical protein	complement(1498186..1498707)	Mycobacterium ulcerans Agy99	4552541
YP_905407.1	CDS	groEL	NC_008611.1	1498999	1500624	D	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL	1498999..1500624	Mycobacterium ulcerans Agy99	4552542
YP_905408.1	CDS	MUL_1394	NC_008611.1	1500708	1501127	R	cytoplasmic protein; hypothetical protein	complement(1500708..1501127)	Mycobacterium ulcerans Agy99	4552543
YP_905409.1	CDS	MUL_1395	NC_008611.1	1501164	1502636	R	PPE10; membrane protein; PPE family protein	complement(1501164..1502636)	Mycobacterium ulcerans Agy99	4552544
YP_905410.1	CDS	MUL_1396	NC_008611.1	1502732	1504444	R	cytoplasmic protein; hydrolizes a specific D-amino acid.; D-amino acid aminohydrolase	complement(1502732..1504444)	Mycobacterium ulcerans Agy99	4552545
YP_905411.1	CDS	MUL_1397	NC_008611.1	1504547	1505062	D	cytoplasmic protein; hypothetical protein	1504547..1505062	Mycobacterium ulcerans Agy99	4552546
YP_905412.1	CDS	MUL_1398	NC_008611.1	1505126	1505920	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1505126..1505920	Mycobacterium ulcerans Agy99	4552547
YP_905413.1	CDS	MUL_1399	NC_008611.1	1505932	1506630	R	membrane protein; hypothetical protein	complement(1505932..1506630)	Mycobacterium ulcerans Agy99	4552548
YP_905414.1	CDS	sigK	NC_008611.1	1506627	1507190	R	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. bovis this protein has been shown to be involved in expression of antigenic proteins; RNA polymerase sigma factor SigK	complement(1506627..1507190)	Mycobacterium ulcerans Agy99	4552549
YP_905415.1	CDS	MUL_1401	NC_008611.1	1507236	1508009	R	membrane protein; transmembrane protein	complement(1507236..1508009)	Mycobacterium ulcerans Agy99	4552550
YP_905416.1	CDS	ufaA1	NC_008611.1	1508027	1509313	R	cytoplasmic protein; transfers a methylene group from S-adenosyl-L- methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge [catalytic activity: S-adenosyl-L- methionine + phospholipid olefinic fatty acid = S-adenosyl- L-homocysteine + phospholipid cyclopropane fatty acid]; cyclopropane-fatty-acyl-phospholipid synthase	complement(1508027..1509313)	Mycobacterium ulcerans Agy99	4552551
YP_905417.1	CDS	MUL_1403	NC_008611.1	1509310	1509954	R	cytoplasmic protein; hypothetical protein	complement(1509310..1509954)	Mycobacterium ulcerans Agy99	4552518
YP_905418.1	CDS	MUL_1404	NC_008611.1	1510020	1511336	R	membrane protein; oxidoreductase	complement(1510020..1511336)	Mycobacterium ulcerans Agy99	4552519
YP_905419.1	CDS	MUL_1406	NC_008611.1	1512229	1513563	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	1512229..1513563	Mycobacterium ulcerans Agy99	4552521
YP_905420.1	CDS	MUL_1407	NC_008611.1	1513923	1514627	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	1513923..1514627	Mycobacterium ulcerans Agy99	4552522
YP_905421.1	CDS	MUL_1408	NC_008611.1	1514652	1514969	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	1514652..1514969	Mycobacterium ulcerans Agy99	4552523
YP_905422.1	CDS	MUL_1410	NC_008611.1	1515962	1517296	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(1515962..1517296)	Mycobacterium ulcerans Agy99	4552525
YP_905423.1	CDS	MUL_1411	NC_008611.1	1518095	1518442	R	cytoplasmic protein; hypothetical protein	complement(1518095..1518442)	Mycobacterium ulcerans Agy99	4552526
YP_905424.1	CDS	MUL_1413	NC_008611.1	1518718	1519167	R	Detected in the secreted protein fraction by 2D-LC- MS/MS.; secreted protein; hypothetical protein	complement(1518718..1519167)	Mycobacterium ulcerans Agy99	4552527
YP_905425.1	CDS	echA2	NC_008611.1	1519234	1520148	R	catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(1519234..1520148)	Mycobacterium ulcerans Agy99	4552528
YP_905426.1	CDS	MUL_1416	NC_008611.1	1522423	1523946	D	cytoplasmic protein; interconversion aldehyde and acid [catalytic activity: an aldehyde + NAD+ + H2O = an acid + NADH]; aldehyde dehydrogenase	1522423..1523946	Mycobacterium ulcerans Agy99	4552530
YP_905427.1	CDS	MUL_1417	NC_008611.1	1523946	1524446	D	cytoplasmic protein; hypothetical protein	1523946..1524446	Mycobacterium ulcerans Agy99	4552531
YP_905428.1	CDS	MUL_1418	NC_008611.1	1524506	1524745	D	membrane protein; hypothetical protein	1524506..1524745	Mycobacterium ulcerans Agy99	4552532
YP_905429.1	CDS	MUL_1419	NC_008611.1	1524738	1525307	D	membrane protein; transmembrane protein	1524738..1525307	Mycobacterium ulcerans Agy99	4552533
YP_905430.1	CDS	MUL_1421	NC_008611.1	1525894	1526940	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1525894..1526940	Mycobacterium ulcerans Agy99	4552486
YP_905431.1	CDS	MUL_1423	NC_008611.1	1527708	1528973	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; dehydrogenase	1527708..1528973	Mycobacterium ulcerans Agy99	4552488
YP_905432.1	CDS	MUL_1424	NC_008611.1	1529017	1531545	R	membrane protein; thought to be involved in active transport of undeterminated substrate (possibly lipooligosaccharide) across the membrane. responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; transmembrane ABC transporter ATP-binding protein	complement(1529017..1531545)	Mycobacterium ulcerans Agy99	4552489
YP_905433.1	CDS	folD	NC_008611.1	1535863	1536708	D	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	1535863..1536708	Mycobacterium ulcerans Agy99	4552492
YP_905434.1	CDS	MUL_1429	NC_008611.1	1536705	1536998	D	membrane protein; hypothetical protein	1536705..1536998	Mycobacterium ulcerans Agy99	4552493
YP_905435.1	CDS	MUL_1430	NC_008611.1	1537002	1537418	R	Detected in the secreted fraction by proteomics.; secreted protein; hypothetical protein	complement(1537002..1537418)	Mycobacterium ulcerans Agy99	4552494
YP_905436.1	CDS	MUL_1431	NC_008611.1	1537672	1539114	D	secreted protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	1537672..1539114	Mycobacterium ulcerans Agy99	4552495
YP_905437.1	CDS	fadD28_1	NC_008611.1	1539362	1541206	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	1539362..1541206	Mycobacterium ulcerans Agy99	4552496
YP_905438.1	CDS	MUL_1434	NC_008611.1	1549194	1549490	R	secreted protein; hypothetical protein	complement(1549194..1549490)	Mycobacterium ulcerans Agy99	4552498
YP_905439.1	CDS	MUL_1435	NC_008611.1	1549552	1549899	R	secreted protein; exported protein	complement(1549552..1549899)	Mycobacterium ulcerans Agy99	4552499
YP_905440.1	CDS	MUL_1436	NC_008611.1	1550039	1550776	R	cytoplasmic protein; causes methylation; methyltransferase	complement(1550039..1550776)	Mycobacterium ulcerans Agy99	4552500
YP_905441.1	CDS	metX	NC_008611.1	1550770	1551909	R	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase	complement(1550770..1551909)	Mycobacterium ulcerans Agy99	4552501
YP_905442.1	CDS	metC	NC_008611.1	1551921	1553270	R	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase	complement(1551921..1553270)	Mycobacterium ulcerans Agy99	4552502
YP_905443.1	CDS	MUL_1440	NC_008611.1	1554837	1555538	R	membrane protein; hypothetical protein	complement(1554837..1555538)	Mycobacterium ulcerans Agy99	4552470
YP_905444.1	CDS	trpS	NC_008611.1	1555795	1556814	D	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase	1555795..1556814	Mycobacterium ulcerans Agy99	4552471
YP_905445.1	CDS	MUL_1442	NC_008611.1	1556819	1557847	D	membrane protein; integral membrane protein	1556819..1557847	Mycobacterium ulcerans Agy99	4552472
YP_905446.1	CDS	nagA	NC_008611.1	1557844	1559010	R	membrane protein; involved in N-acetyl glucosamine utilization pathway [catalytic activity: N-acetyl-D-glucosamine 6- phosphate + H(2)O = D-glucosamine 6-phosphate + acetate]; n-acetylglucosamine-6-phosphate deacetylase NagA	complement(1557844..1559010)	Mycobacterium ulcerans Agy99	4552473
YP_905447.1	CDS	sugI	NC_008611.1	1559007	1560356	R	membrane protein; thought to be involved in transport of sugar across the membrane. responsible for the translocation of the substrate across the membrane.; sugar-transport integral membrane protein SugI	complement(1559007..1560356)	Mycobacterium ulcerans Agy99	4552474
YP_905448.1	CDS	dacC	NC_008611.1	1560558	1561805	R	secreted protein; involved in peptidoglycan synthesis (at final stages) hydrolyzes the bound D-alanyl-D-alanine [catalytic activity: D-alanyl-D-alanine + H(2)O = 2 D- alanine]; penicillin-binding protein DacC	complement(1560558..1561805)	Mycobacterium ulcerans Agy99	4552475
YP_905449.1	CDS	MUL_1446	NC_008611.1	1561927	1562565	D	secreted protein; hypothetical protein	1561927..1562565	Mycobacterium ulcerans Agy99	4552476
YP_905450.1	CDS	MUL_1447	NC_008611.1	1562672	1564873	D	cytoplasmic protein; possible inter-alpha-trypsin inhibitor family heavy chain-related protein-hypothetical secreted or membrane- associated protein containing vWFA domain.; hypothetical protein	1562672..1564873	Mycobacterium ulcerans Agy99	4552477
YP_905451.1	CDS	MUL_1450	NC_008611.1	1567392	1568603	D	membrane protein; PE-PGRS family protein	1567392..1568603	Mycobacterium ulcerans Agy99	4552480
YP_905452.1	CDS	MUL_1454	NC_008611.1	1571380	1572426	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(1571380..1572426)	Mycobacterium ulcerans Agy99	4552484
YP_905453.1	CDS	esxP_1	NC_008611.1	1572858	1573154	D	Detected in the cytoplasmic and membrane fractions by 2D-LC-MS/MS.; secreted protein; EsaT-6 like protein EsxP	1572858..1573154	Mycobacterium ulcerans Agy99	4552453
YP_905454.1	CDS	esxN_1	NC_008611.1	1573217	1573501	D	Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; secreted protein; EsaT-6 like protein EsxN	1573217..1573501	Mycobacterium ulcerans Agy99	4552454
YP_905455.1	CDS	dgt	NC_008611.1	1575842	1577119	D	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein	1575842..1577119	Mycobacterium ulcerans Agy99	4552456
YP_905456.1	CDS	dnaG	NC_008611.1	1577161	1579131	D	synthesizes RNA primers at the replication forks; DNA primase	1577161..1579131	Mycobacterium ulcerans Agy99	4552457
YP_905457.1	CDS	MUL_1460	NC_008611.1	1579146	1579391	R	hypothetical protein	complement(1579146..1579391)	Mycobacterium ulcerans Agy99	4552458
YP_905458.1	CDS	MUL_1462	NC_008611.1	1579758	1580210	R	secreted protein; function unknown, contains N-term signal peptide indicative of secreted protein.; hypothetical protein	complement(1579758..1580210)	Mycobacterium ulcerans Agy99	4552460
YP_905459.1	CDS	thiX	NC_008611.1	1580238	1580666	R	secreted protein; thioredoxin participates in various redox reactions through the reversible oxidation of its active center dithiol, to a disulfide, & catalyzes dithiol-disulfide exchange reactions.; thioredoxin ThiX	complement(1580238..1580666)	Mycobacterium ulcerans Agy99	4552461
YP_905460.1	CDS	cysE	NC_008611.1	1580677	1581363	R	cytoplasmic protein; involved in cysteine biosynthesis [catalytic activity: acetyl-CoA + L-serine = CoA + O-acetyl-L- serine]; serine acetyltransferase CysE	complement(1580677..1581363)	Mycobacterium ulcerans Agy99	4552462
YP_905461.1	CDS	cysK1	NC_008611.1	1581366	1582298	R	Also detected in the membrane fraction by proteomics.; cytoplasmic protein; involved in cysteine biosynthesis [catalytic activity: O3-acetyl-L-serine + H(2)S = L-cysteine + acetate]; cysteine synthase a CysK1	complement(1581366..1582298)	Mycobacterium ulcerans Agy99	4552463
YP_905462.1	CDS	MUL_1466	NC_008611.1	1582295	1582711	R	hypothetical protein	complement(1582295..1582711)	Mycobacterium ulcerans Agy99	4552464
YP_905463.1	CDS	mez	NC_008611.1	1583019	1584665	R	malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase	complement(1583019..1584665)	Mycobacterium ulcerans Agy99	4552465
YP_905464.1	CDS	MUL_1468	NC_008611.1	1585082	1585987	D	membrane protein; thought to be involved in a transport system across the membrane (perhaps drug transport): responsible for the translocation of the substrate across the membrane.; integral membrane transport protein	1585082..1585987	Mycobacterium ulcerans Agy99	4552466
YP_905465.1	CDS	MUL_1469	NC_008611.1	1586263	1587309	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1586263..1587309	Mycobacterium ulcerans Agy99	4552467
YP_905466.1	CDS	MUL_1471	NC_008611.1	1587623	1588957	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	1587623..1588957	Mycobacterium ulcerans Agy99	4552433
YP_905467.1	CDS	MUL_1472	NC_008611.1	1590742	1592343	R	membrane protein; thought to play an essential roles in regulation of cellular metabolism by catalysing the synthesis of a second messenger, camp [catalytic activity: ATP = 3',5'- cyclic AMP + pyrophosphate]; adenylate cyclase	complement(1590742..1592343)	Mycobacterium ulcerans Agy99	4552434
YP_905468.1	CDS	fdhF	NC_008611.1	1592995	1597203	R	cytoplasmic protein; decomposes formic acid to hydrogen and carbon dioxide under anaerobic conditions in the absence of exogenous electron acceptors [catalytic activity: formate + NAD(+) = CO(2) + NADH]; formate dehydrogenase H FdhF	complement(1592995..1597203)	Mycobacterium ulcerans Agy99	4552435
YP_905469.1	CDS	lppP	NC_008611.1	1597621	1598124	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipoprotein LppP	1597621..1598124	Mycobacterium ulcerans Agy99	4552436
YP_905470.1	CDS	ctpD	NC_008611.1	1598916	1600895	D	membrane protein; cation-transporting ATPase; possibly catalyzes the transport of a cation (possibly cadmium) with the hydrolyse of ATP [catalytic activity: ATP + H(2)O + cation(in) = ADP + phosphate + cation(out)]; cation transporter p-type ATPase D CtpD	1598916..1600895	Mycobacterium ulcerans Agy99	4552438
YP_905471.1	CDS	trxA	NC_008611.1	1600990	1601346	D	cytoplasmic protein; thioredoxin participates in various redox reactions through the reversible oxidation of its active center dithiol, to a disulfide, & catalyzes dithiol-disulfide exchange reactions.; thioredoxin TrxA	1600990..1601346	Mycobacterium ulcerans Agy99	4552439
YP_905472.1	CDS	trxB1	NC_008611.1	1601432	1601761	D	cytoplasmic protein; thioredoxin participates in various redox reactions through the reversible oxidation of its active center dithiol, to a disulfide, & catalyzes dithiol-disulfide exchange reactions.; thioredoxin TrxB1	1601432..1601761	Mycobacterium ulcerans Agy99	4552440
YP_905473.1	CDS	echA12	NC_008611.1	1601845	1602654	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	1601845..1602654	Mycobacterium ulcerans Agy99	4552441
YP_905474.1	CDS	MUL_1481	NC_008611.1	1602679	1604307	D	membrane protein; probable macrolide-transport ATP-binding protein ABC transporter. thought to be involved in active transport of macrolide across the membrane.; ABC transporter ATP-binding protein	1602679..1604307	Mycobacterium ulcerans Agy99	4552442
YP_905475.1	CDS	MUL_1482	NC_008611.1	1604392	1604583	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	1604392..1604583	Mycobacterium ulcerans Agy99	4552443
YP_905476.1	CDS	MUL_1483	NC_008611.1	1604585	1605148	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	complement(1604585..1605148)	Mycobacterium ulcerans Agy99	4552444
YP_905477.2	CDS	acn	NC_008611.1	1605158	1607977	R	Catalyzes the conversion of citrate to isocitrate; aconitate hydratase	complement(1605158..1607977)	Mycobacterium ulcerans Agy99	4552445
YP_905478.1	CDS	MUL_1485	NC_008611.1	1608253	1608831	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1608253..1608831	Mycobacterium ulcerans Agy99	4552446
YP_905479.1	CDS	MUL_1486	NC_008611.1	1609063	1610472	D	secreted protein; function unknown, similar to a hypothetical invasion protein. possibly an exported protein with unusually long signal sequence. NLP/P60 family protein; cell wall-associated hydrolase	1609063..1610472	Mycobacterium ulcerans Agy99	4552447
YP_905480.1	CDS	inv2	NC_008611.1	1610498	1611217	D	secreted protein; function unknown. homology to cell wall-associated hydrolases. possibly an exported protein of the NLP/P60 family.; invasion protein Inv2	1610498..1611217	Mycobacterium ulcerans Agy99	4552448
YP_905481.1	CDS	moxR1	NC_008611.1	1611416	1612531	D	Detected in the cytoplamic and membrane fractions by LC-MS/MS. Also detected in the extracellular matrix by proteomics.; membrane protein; involved in transcriptional mechanism.; transcriptional regulatory protein, MoxR1	1611416..1612531	Mycobacterium ulcerans Agy99	4552449
YP_905482.1	CDS	MUL_1489	NC_008611.1	1612546	1613502	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1612546..1613502	Mycobacterium ulcerans Agy99	4552450
YP_905483.1	CDS	MUL_1490	NC_008611.1	1613537	1614544	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1613537..1614544	Mycobacterium ulcerans Agy99	4552451
YP_905484.1	CDS	fabG1	NC_008611.1	1614659	1615426	D	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; involved in the fatty acid biosynthesis pathway (first reduction step) (mycolic acid biosynthesis); reduces KasA/KasB products [catalytic activity: (3R)-3- hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl- [acyl-carrier protein] + NADPH]; 3-oxoacyl-ACP reductase	1614659..1615426	Mycobacterium ulcerans Agy99	4552452
YP_905485.1	CDS	inhA	NC_008611.1	1615505	1616314	D	Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase	1615505..1616314	Mycobacterium ulcerans Agy99	4552376
YP_905486.1	CDS	hemH	NC_008611.1	1616321	1617343	D	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase	1616321..1617343	Mycobacterium ulcerans Agy99	4552377
YP_905487.1	CDS	MUL_1494	NC_008611.1	1617350	1618345	R	cytoplasmic protein; hypothetical protein	complement(1617350..1618345)	Mycobacterium ulcerans Agy99	4552378
YP_905488.1	CDS	MUL_1495	NC_008611.1	1618312	1619646	D	cytoplasmic protein; required for the transposition of insertion element IS2606; transposase for IS2606	1618312..1619646	Mycobacterium ulcerans Agy99	4552379
YP_905489.1	CDS	MUL_1496	NC_008611.1	1619804	1620238	D	membrane protein; function unknown. contains Cdd match to COG1585, COG1585, membrane protein implicated in regulation of membrane protease activity [posttranslational modification, protein turnover, chaperones / intracellular trafficking and secretion]; hypothetical protein	1619804..1620238	Mycobacterium ulcerans Agy99	4552380
YP_905490.1	CDS	MUL_1498	NC_008611.1	1621425	1621769	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1621425..1621769	Mycobacterium ulcerans Agy99	4552382
YP_905491.1	CDS	MUL_1499	NC_008611.1	1621766	1622200	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(1621766..1622200)	Mycobacterium ulcerans Agy99	4552383
YP_905492.1	CDS	MUL_1500	NC_008611.1	1622266	1622880	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulator	complement(1622266..1622880)	Mycobacterium ulcerans Agy99	4552384
YP_905493.1	CDS	MUL_1501	NC_008611.1	1623755	1624498	D	cytoplasmic protein; contains N-terminal Cdd pfam00072, response_reg, response regulator receiver domain. this domain receives the signal from the sensor partner in bacterial two- component systems. it is usually found N-terminal to a DNA binding effector domain. C-terminal conatins Cdd pfam00486, trans_reg_C, transcriptional regulatory protein, C terminal.; two component regulator receiver domain-containing protein	1623755..1624498	Mycobacterium ulcerans Agy99	4552385
YP_905494.1	CDS	MUL_1502	NC_008611.1	1624498	1626018	D	membrane protein; two component system response sensor kinase contains Cdd pfam02518, hATPase_C, histidine kinase-, DNA gyrase B-, and Hsp90-like ATPase; Cdd pfam00512, HisKA, His kinase a (phosphoacceptor) domain. dimerisation and phosphoacceptor domain of histidine kinases.; two component regulator - sensor kinase	1624498..1626018	Mycobacterium ulcerans Agy99	4552386
YP_905495.1	CDS	MUL_1503	NC_008611.1	1626023	1626838	R	membrane protein; hypothetical protein	complement(1626023..1626838)	Mycobacterium ulcerans Agy99	4552387
YP_905496.1	CDS	MUL_1504	NC_008611.1	1627062	1627841	R	membrane protein; conserved membrane protein of unknown function. similar to proteins from many organisms containing Cdd COG0398; uncharacterized conserved protein [function unknown]; hypothetical protein	complement(1627062..1627841)	Mycobacterium ulcerans Agy99	4552388
YP_905497.1	CDS	mutA	NC_008611.1	1628029	1629906	D	membrane protein; involved in propionic acid fermentation. catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid- cycle intermediates [catalytic activity: (R)-2-methyl-3- oxopropanoyl-CoA = succinyl- CoA]; methylmalonyl-CoA mutase small subunit, MutA	1628029..1629906	Mycobacterium ulcerans Agy99	4552389
YP_905498.1	CDS	mutB	NC_008611.1	1629912	1632173	D	MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase	1629912..1632173	Mycobacterium ulcerans Agy99	4552390
YP_905499.1	CDS	MUL_1507	NC_008611.1	1632262	1633251	D	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase	1632262..1633251	Mycobacterium ulcerans Agy99	4552391
YP_905500.1	CDS	MUL_1509	NC_008611.1	1634621	1634833	R	cytoplasmic protein; function unknown. contains Cdd pfam07311, DUF1458, protein of unknown function (DUF1458) this family consists of several hypothetical bacterial proteins as well as one archaeal sequence. members of this family are typically of around 70 residues in length. the function of this family is unknown.; hypothetical protein	complement(1634621..1634833)	Mycobacterium ulcerans Agy99	4552393
YP_905501.1	CDS	MUL_1510	NC_008611.1	1634961	1635740	R	cytoplasmic protein; hypothetical protein	complement(1634961..1635740)	Mycobacterium ulcerans Agy99	4552360
YP_905502.1	CDS	MUL_1511	NC_008611.1	1635989	1637245	D	cytoplasmic protein; possibly involved in polysaccharide biosynthesis [catalytic activity: UDP-glucose + 2 NAD+ + H2O = UDP- glucuronate + 2 NADH] belongs to  UDP-glucose/GDP-mannose dehydrogenase family; UDP-glucose 6-dehydrogenase	1635989..1637245	Mycobacterium ulcerans Agy99	4552361
YP_905503.1	CDS	MUL_1512	NC_008611.1	1637242	1638261	D	cytoplasmic protein; involved in galactofuranosyl biosynthesis: converts UDO-GlcP to UDP-GalP [catalytic activity: UDP- glucopyranose = UDP-galactopyranose]; UDP-glucose 4-epimerase	1637242..1638261	Mycobacterium ulcerans Agy99	4552362
YP_905504.1	CDS	MUL_1518	NC_008611.1	1642065	1642769	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	1642065..1642769	Mycobacterium ulcerans Agy99	4552366
YP_905505.1	CDS	MUL_1519	NC_008611.1	1642800	1643111	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	1642800..1643111	Mycobacterium ulcerans Agy99	4552367
YP_905506.1	CDS	MUL_1520	NC_008611.1	1643319	1644650	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	1643319..1644650	Mycobacterium ulcerans Agy99	4552368
YP_905507.1	CDS	MUL_5113	NC_008611.1	1645717	1645884	D	cytoplasmic protein; hypothetical protein	1645717..1645884	Mycobacterium ulcerans Agy99	4552370
YP_905508.1	CDS	MUL_1522	NC_008611.1	1646073	1646306	D	cytoplasmic protein; hypothetical protein	1646073..1646306	Mycobacterium ulcerans Agy99	4552371
YP_905509.1	CDS	wbbL2	NC_008611.1	1646564	1647331	D	membrane protein; possibly involved in cell wall arabinogalactan linker formation: uses dTDP-L-rhamnose as substrate to insert the rhamnosyl residue into the cell wall; rhamnosyl transferase WbbL2	1646564..1647331	Mycobacterium ulcerans Agy99	4552372
YP_905510.1	CDS	MUL_1526	NC_008611.1	1648150	1648899	D	cytoplasmic protein; function unknown.contains Cdd pfam00535, glycos_transf_2, glycosyl transferase. diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; glycosyl transferase family protein	1648150..1648899	Mycobacterium ulcerans Agy99	4552374
YP_905511.1	CDS	MUL_1527	NC_008611.1	1649017	1649751	R	membrane protein; hypothetical protein	complement(1649017..1649751)	Mycobacterium ulcerans Agy99	4552375
YP_905512.1	CDS	MUL_1528	NC_008611.1	1650047	1651093	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1650047..1651093	Mycobacterium ulcerans Agy99	4552340
YP_905513.1	CDS	MUL_1529	NC_008611.1	1651094	1652236	R	membrane protein; function unknown. contains Cdd COG1819, glycosyl transferases, related to UDP-glucuronosyltransferase [carbohydrate transport and metabolism / signal transduction mechanisms]; UDP-glycosyltransferase	complement(1651094..1652236)	Mycobacterium ulcerans Agy99	4552341
YP_905514.1	CDS	MUL_1530	NC_008611.1	1652337	1653710	R	membrane protein; function unknown. similarity to Cdd pfam03007. uncharacterised protein family (UPF0089) this family of uncharacterised proteins is greatly expanded in mycobacterium tuberculosis. the most conserved region of the proteins contains conserved histidine and aspartate residues suggesting a possible metal binding site suggestive of a protease activity.; hypothetical protein	complement(1652337..1653710)	Mycobacterium ulcerans Agy99	4552342
YP_905515.1	CDS	papA3	NC_008611.1	1653725	1655233	R	cytoplasmic protein; function unknown. thought to be involved in lipid metabolism.; polyketide synthase associated protein PapA3	complement(1653725..1655233)	Mycobacterium ulcerans Agy99	4552343
YP_905516.1	CDS	ileS	NC_008611.1	1655932	1659132	D	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase	1655932..1659132	Mycobacterium ulcerans Agy99	4552344
YP_905517.1	CDS	MUL_1534	NC_008611.1	1660244	1660816	R	cytoplasmic protein; function unknown. partial Cdd  COG0030, KsgA, dimethyladenosine transferase (rRNA methylation) [translation, ribosomal structure and biogenesis]; hypothetical protein	complement(1660244..1660816)	Mycobacterium ulcerans Agy99	4552346
YP_905518.1	CDS	dinP_1	NC_008611.1	1660874	1662295	D	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV	1660874..1662295	Mycobacterium ulcerans Agy99	4552347
YP_905519.1	CDS	ansA	NC_008611.1	1662260	1663249	R	cytoplasmic protein; conversion of asparagine to aspartate; L-aparaginase AnsA	complement(1662260..1663249)	Mycobacterium ulcerans Agy99	4552348
YP_905520.1	CDS	lspA	NC_008611.1	1662953	1663882	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; this protein specifically catalyzes the removal of signal peptides from prolipoproteins [catalytic activity : cleavage of N-terminal leader sequences from membrane prolipoproteins; lipoprotein signal peptidase LspA	1662953..1663882	Mycobacterium ulcerans Agy99	4552349
YP_905521.1	CDS	MUL_1538	NC_008611.1	1663879	1664916	D	membrane protein; pseudouridine synthase (pseudouridylate synthase) (uracil hydrolyase)[catalytic activity] uracil + D-ribose 5-phosphate = pseudouridine 5'-phosphate + H(2)O.; RluA family pseudouridine synthase	1663879..1664916	Mycobacterium ulcerans Agy99	4552350
YP_905522.1	CDS	MUL_1539	NC_008611.1	1664817	1665524	R	cytoplasmic protein; function unknown. contains partial Cdd COG2226, UbiE, methylase involved in ubiquinone/menaquinone biosynthesis; hypothetical protein	complement(1664817..1665524)	Mycobacterium ulcerans Agy99	4552351
YP_905523.1	CDS	lprL	NC_008611.1	1665883	1666518	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown.; lipoprotein, LprL	complement(1665883..1666518)	Mycobacterium ulcerans Agy99	4552352
YP_905524.1	CDS	glbN	NC_008611.1	1666602	1667012	R	cytoplasmic protein; oxygen transport.  this family of HemE binding proteins are found mainly in bacteria.; globin family protein	complement(1666602..1667012)	Mycobacterium ulcerans Agy99	4552353
YP_905525.1	CDS	MUL_1543	NC_008611.1	1668263	1669066	D	Detected in the cytoplasmic fraction; membrane protein; possibly involvement in lipid metabolism; ketoacyl reductase	1668263..1669066	Mycobacterium ulcerans Agy99	4552355
YP_905526.1	CDS	MUL_1544	NC_008611.1	1669186	1669617	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; hypothetical protein	1669186..1669617	Mycobacterium ulcerans Agy99	4552356
YP_905527.1	CDS	dnaE	NC_008611.1	1669684	1673226	D	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha	1669684..1673226	Mycobacterium ulcerans Agy99	4552357
YP_905528.1	CDS	fadD11	NC_008611.1	1673353	1675179	D	membrane protein; probably involved in lipid degradation; fatty-acid-CoA ligase FadD11	1673353..1675179	Mycobacterium ulcerans Agy99	4552358
YP_905529.1	CDS	plsB1	NC_008611.1	1675194	1677068	D	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase	1675194..1677068	Mycobacterium ulcerans Agy99	4552359
YP_905530.1	CDS	MUL_1548	NC_008611.1	1677076	1677306	R	secreted protein; function unknown.; hypothetical protein	complement(1677076..1677306)	Mycobacterium ulcerans Agy99	4552321
YP_905531.1	CDS	MUL_1549	NC_008611.1	1677348	1677845	D	Detected in the cytoplasmic and secreted fractions by 2D-LC-MS/MS.; secreted protein; function unknown. contains Cdd pfam04075, domain of unknown function (DUF385) family of mycobacterium tuberculosis proteins.; hypothetical protein	1677348..1677845	Mycobacterium ulcerans Agy99	4552322
YP_905532.1	CDS	ilvA	NC_008611.1	1677889	1679169	D	catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase	1677889..1679169	Mycobacterium ulcerans Agy99	4552323
YP_905533.1	CDS	MUL_1551	NC_008611.1	1679197	1679733	R	cytoplasmic protein; hypothetical protein	complement(1679197..1679733)	Mycobacterium ulcerans Agy99	4552324
YP_905534.1	CDS	MUL_1552	NC_008611.1	1679775	1681100	D	cytoplasmic protein; involved in transcriptional mechanism.; GntR family transcriptional regulator	1679775..1681100	Mycobacterium ulcerans Agy99	4552325
YP_905535.1	CDS	treZ	NC_008611.1	1681113	1682876	R	cytoplasmic protein; involved in trehalose biosynthesis (protective effect) mycobacteria can produce trehalose from glucose 6- phosphate and UDP-glucose (the OtsA-OtsB pathway) from glycogen-like alpha(1-->4)-linked glucose polymers (the TreY-TreZ pathway) and from maltose (the TreS pathway); maltooligosyltrehalose trehalohydrolase, TreZ	complement(1681113..1682876)	Mycobacterium ulcerans Agy99	4552326
YP_905536.1	CDS	treY	NC_008611.1	1682873	1685170	R	membrane protein; involved in trehalose biosynthesis (protective effect) mycobacteria can produce trehalose from glucose 6- phosphate and UDP-glucose (the OtsA-OtsB pathway) from glycogen-like alpha(1-->4)-linked glucose polymers (the TreY-TreZ pathway); maltooligosyltrehalose synthase TreY	complement(1682873..1685170)	Mycobacterium ulcerans Agy99	4552327
YP_905537.1	CDS	treX	NC_008611.1	1685174	1687351	R	cytoplasmic protein; possibly involved in trehalose biosynthesis (protective effect) mycobacteria can produce trehalose from glucose 6-phosphate and UDP-glucose (the OtsA-OtsB pathway) from glycogen-like alpha(1-->4)-linked glucose polymers (the TreY-TreZ pathway); maltooligosyltrehalose synthase TreX	complement(1685174..1687351)	Mycobacterium ulcerans Agy99	4552328
YP_905538.1	CDS	MUL_1556	NC_008611.1	1687451	1689616	R	membrane protein; hypothetical protein	complement(1687451..1689616)	Mycobacterium ulcerans Agy99	4552329
YP_905539.1	CDS	MUL_1557	NC_008611.1	1689724	1690503	R	Detected in the secreted protein fraction by 2D-LC- MS/MS.; secreted protein; possible inv protein, probably exported as has QQAPV repeats at c-terminus.; inv protein	complement(1689724..1690503)	Mycobacterium ulcerans Agy99	4552330
YP_905540.1	CDS	MUL_1558	NC_008611.1	1690849	1691301	R	membrane protein; hypothetical protein	complement(1690849..1691301)	Mycobacterium ulcerans Agy99	4552331
YP_905541.1	CDS	bioA	NC_008611.1	1691386	1692699	D	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase	1691386..1692699	Mycobacterium ulcerans Agy99	4552332
YP_905542.1	CDS	bioF1	NC_008611.1	1692706	1693875	D	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase	1692706..1693875	Mycobacterium ulcerans Agy99	4552333
YP_905543.1	CDS	bioD	NC_008611.1	1693872	1694552	D	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase	1693872..1694552	Mycobacterium ulcerans Agy99	4552334
YP_905544.1	CDS	MUL_1562	NC_008611.1	1694554	1695063	D	membrane protein; hypothetical protein	1694554..1695063	Mycobacterium ulcerans Agy99	4552335
YP_905545.1	CDS	bioB	NC_008611.1	1695213	1696265	D	catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase	1695213..1696265	Mycobacterium ulcerans Agy99	4552336
YP_905546.1	CDS	MUL_1564	NC_008611.1	1696281	1696508	D	cytoplasmic protein; hypothetical protein	1696281..1696508	Mycobacterium ulcerans Agy99	4552337
YP_905547.1	CDS	MUL_1565	NC_008611.1	1696520	1697203	D	membrane protein; hypothetical protein	1696520..1697203	Mycobacterium ulcerans Agy99	4552338
YP_905548.1	CDS	MUL_1566	NC_008611.1	1697249	1698589	R	membrane protein; hypothetical protein	complement(1697249..1698589)	Mycobacterium ulcerans Agy99	4552339
YP_905549.1	CDS	MUL_1567	NC_008611.1	1698946	1699653	R	cytoplasmic protein; function unknown, domain identity to ADP-ribose pyrophosphatases, possible role in nucleotide transport and metabolism.; hypothetical protein	complement(1698946..1699653)	Mycobacterium ulcerans Agy99	4552303
YP_905550.1	CDS	nadA	NC_008611.1	1699701	1700759	D	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase	1699701..1700759	Mycobacterium ulcerans Agy99	4552304
YP_905551.1	CDS	nadB	NC_008611.1	1700756	1702330	D	catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase	1700756..1702330	Mycobacterium ulcerans Agy99	4552305
YP_905552.1	CDS	nadC	NC_008611.1	1702330	1703187	D	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase	1702330..1703187	Mycobacterium ulcerans Agy99	4552306
YP_905553.1	CDS	MUL_1571	NC_008611.1	1703249	1703659	R	cytoplasmic protein; hypothetical protein	complement(1703249..1703659)	Mycobacterium ulcerans Agy99	4552307
YP_905554.1	CDS	hisD	NC_008611.1	1703744	1705087	D	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase	1703744..1705087	Mycobacterium ulcerans Agy99	4552308
YP_905555.1	CDS	hisC1	NC_008611.1	1705084	1706232	D	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase	1705084..1706232	Mycobacterium ulcerans Agy99	4552309
YP_905556.1	CDS	hisB	NC_008611.1	1706229	1706861	D	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase	1706229..1706861	Mycobacterium ulcerans Agy99	4552310
YP_905557.1	CDS	hisH	NC_008611.1	1706885	1707490	D	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH	1706885..1707490	Mycobacterium ulcerans Agy99	4552311
YP_905558.1	CDS	hisA	NC_008611.1	1707502	1708236	D	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis; phosphoribosyl isomerase A	1707502..1708236	Mycobacterium ulcerans Agy99	4552312
YP_905559.1	CDS	impA	NC_008611.1	1708243	1709055	D	cytoplasmic protein; involved in inositol phosphate metabolism. it is responsible for the provision of inositol required for synthesis of phosphatidylinositol and polyphosphoinositides. key enzyme of the phosphatidyl inositol signaling pathway [catalytic activity: inositol 1(or 4)-monophosphate + H(2)O = inositol + orthophosphate]; inositol-monophosphatase ImpA	1708243..1709055	Mycobacterium ulcerans Agy99	4552313
YP_905560.1	CDS	hisF	NC_008611.1	1709057	1709842	D	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF	1709057..1709842	Mycobacterium ulcerans Agy99	4552314
YP_905561.1	CDS	hisI	NC_008611.1	1709839	1710174	D	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase	1709839..1710174	Mycobacterium ulcerans Agy99	4552315
YP_905562.1	CDS	MUL_1580	NC_008611.1	1710297	1711388	R	cytoplasmic protein; function unknown.; deacylase	complement(1710297..1711388)	Mycobacterium ulcerans Agy99	4552316
YP_905563.1	CDS	MUL_1582	NC_008611.1	1711705	1713039	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	1711705..1713039	Mycobacterium ulcerans Agy99	4552318
YP_905564.1	CDS	MUL_1584	NC_008611.1	1713718	1714764	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1713718..1714764	Mycobacterium ulcerans Agy99	4552320
YP_905565.1	CDS	bcpB	NC_008611.1	1721808	1722266	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; peroxide detoxification; peroxidoxin BcpB	complement(1721808..1722266)	Mycobacterium ulcerans Agy99	4552111
YP_905566.1	CDS	trpE	NC_008611.1	1722317	1723855	D	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I	1722317..1723855	Mycobacterium ulcerans Agy99	4552112
YP_905567.1	CDS	MUL_1590	NC_008611.1	1723848	1724543	D	membrane protein; hypothetical protein	1723848..1724543	Mycobacterium ulcerans Agy99	4552113
YP_905568.1	CDS	trpC	NC_008611.1	1724633	1725451	D	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase	1724633..1725451	Mycobacterium ulcerans Agy99	4552114
YP_905569.1	CDS	trpB	NC_008611.1	1725487	1726764	D	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta	1725487..1726764	Mycobacterium ulcerans Agy99	4552115
YP_905570.1	CDS	trpA	NC_008611.1	1726767	1727576	D	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha	1726767..1727576	Mycobacterium ulcerans Agy99	4552116
YP_905571.1	CDS	MUL_1595	NC_008611.1	1729539	1729931	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1729539..1729931	Mycobacterium ulcerans Agy99	4552118
YP_905572.1	CDS	MUL_1596	NC_008611.1	1729921	1730364	D	membrane protein; hypothetical protein	1729921..1730364	Mycobacterium ulcerans Agy99	4552119
YP_905573.1	CDS	cut1	NC_008611.1	1730386	1731054	R	secreted protein; hydrolysis of cutin.; cutinase Cut1	complement(1730386..1731054)	Mycobacterium ulcerans Agy99	4552120
YP_905574.1	CDS	pykA	NC_008611.1	1731548	1732966	D	catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase	1731548..1732966	Mycobacterium ulcerans Agy99	4552121
YP_905575.1	CDS	tesB1	NC_008611.1	1733090	1733971	D	cytoplasmic protein; involved in fatty acid metabolism.; acyl-CoA thioesterase II TesB1	1733090..1733971	Mycobacterium ulcerans Agy99	4552122
YP_905576.1	CDS	MUL_1600	NC_008611.1	1734103	1735503	D	membrane protein; hypothetical protein	1734103..1735503	Mycobacterium ulcerans Agy99	4552123
YP_905577.1	CDS	cydC	NC_008611.1	1735465	1737120	R	secreted protein; involved in active transport across the membrane of component linked with the assembly of cytochrome: involved in cytochrome biogenesis (aerobic respiration) responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; component linked with the assembly of cytochrome transport transmembrane ATP-binding protein ABC transporter CydC	complement(1735465..1737120)	Mycobacterium ulcerans Agy99	4552124
YP_905578.1	CDS	cydD	NC_008611.1	1737146	1738744	R	secreted protein; involved in active transport across the membrane of component linked with the assembly of cytochrome: involved in cytochrome biogenesis (aerobic respiration) responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; component linked with the assembly of cytochrome transport transmembrane ATP-binding protein ABC transporter CydD	complement(1737146..1738744)	Mycobacterium ulcerans Agy99	4552125
YP_905579.1	CDS	cydB	NC_008611.1	1738257	1739873	R	membrane protein; involved in the respiratory chain (at the terminal step): aerobic respiration. cytochrome D terminal oxidase complex is the component of the aerobic respiratory chain that is supposed predominated when cells are grown at low aeration [catalytic activity: ubiquinol-8 + O(2) = ubiquinone-8 + H(2)O]; integral membrane cytochrome D ubiquinol oxidase (subunit II) CydB	complement(1738257..1739873)	Mycobacterium ulcerans Agy99	4552126
YP_905580.1	CDS	MUL_1605	NC_008611.1	1741482	1742060	R	membrane protein; hypothetical protein	complement(1741482..1742060)	Mycobacterium ulcerans Agy99	4552091
YP_905581.1	CDS	MUL_1608	NC_008611.1	1743757	1744383	D	Also detected in the extracellular matrix and the membrane fractions by proteomics.; cytoplasmic protein; sensor part of a two component regulatory system; two-component system transcriptional regulator	1743757..1744383	Mycobacterium ulcerans Agy99	4552094
YP_905582.1	CDS	MUL_1610	NC_008611.1	1745631	1746071	R	cytoplasmic protein; hypothetical protein	complement(1745631..1746071)	Mycobacterium ulcerans Agy99	4552096
YP_905583.1	CDS	polA	NC_008611.1	1746175	1748874	D	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I	1746175..1748874	Mycobacterium ulcerans Agy99	4552097
YP_905584.1	CDS	rpsA	NC_008611.1	1749255	1750700	D	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1	1749255..1750700	Mycobacterium ulcerans Agy99	4552098
YP_905585.1	CDS	coaE	NC_008611.1	1750713	1751936	D	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; in Mycobacterium tuberculosis the C-terminal UPF0157 domain appears to be necessary for proper folding of the N-terminal domain; dephospho-CoA kinase/protein folding accessory domain-containing protein	1750713..1751936	Mycobacterium ulcerans Agy99	4552099
YP_905586.1	CDS	MUL_1614	NC_008611.1	1752054	1752605	R	cytoplasmic protein; hypothetical protein	complement(1752054..1752605)	Mycobacterium ulcerans Agy99	4552100
YP_905587.1	CDS	MUL_1615	NC_008611.1	1752651	1753091	R	cytoplasmic protein; hypothetical protein	complement(1752651..1753091)	Mycobacterium ulcerans Agy99	4552101
YP_905588.1	CDS	uvrB	NC_008611.1	1753352	1755457	D	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B	1753352..1755457	Mycobacterium ulcerans Agy99	4552102
YP_905589.1	CDS	MUL_1617	NC_008611.1	1755494	1756906	D	membrane protein; thought to be involved in transport of drug across the membrane (export) drug resistance by an export mechanism (conferes resistance to toxic compounds by removing them for the cells); drug efflux membrane protein	1755494..1756906	Mycobacterium ulcerans Agy99	4552103
YP_905590.1	CDS	MUL_1618	NC_008611.1	1756895	1758463	R	membrane protein; transmembrane protein	complement(1756895..1758463)	Mycobacterium ulcerans Agy99	4552104
YP_905591.1	CDS	MUL_1619	NC_008611.1	1758785	1759225	D	Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; function unknown, domain identity to universal stress protein family and to iron-regulated conserved hypothetical protein TB15.3 from M. tuberculosis H37Rv.; iron-regulated protein	1758785..1759225	Mycobacterium ulcerans Agy99	4552105
YP_905592.1	CDS	MUL_1620	NC_008611.1	1759594	1759986	D	Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; hypothetical protein	1759594..1759986	Mycobacterium ulcerans Agy99	4552106
YP_905593.1	CDS	MUL_1621	NC_008611.1	1760106	1760783	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(1760106..1760783)	Mycobacterium ulcerans Agy99	4552107
YP_905594.1	CDS	uvrA	NC_008611.1	1760979	1763894	D	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A	1760979..1763894	Mycobacterium ulcerans Agy99	4552071
YP_905595.1	CDS	MUL_1624	NC_008611.1	1765618	1765920	R	cytoplasmic protein; hypothetical protein	complement(1765618..1765920)	Mycobacterium ulcerans Agy99	4552073
YP_905596.1	CDS	MUL_1625	NC_008611.1	1766008	1767453	R	membrane protein; hypothetical protein	complement(1766008..1767453)	Mycobacterium ulcerans Agy99	4552074
YP_905597.1	CDS	lysS	NC_008611.1	1767497	1770790	R	catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase	complement(1767497..1770790)	Mycobacterium ulcerans Agy99	4552075
YP_905598.1	CDS	infC	NC_008611.1	1771295	1771831	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.; initiation factor IF-3 InfC	1771295..1771831	Mycobacterium ulcerans Agy99	4552076
YP_905599.1	CDS	rpmI	NC_008611.1	1771862	1772056	D	cytoplasmic protein; translation; 50S ribosomal protein L35	1771862..1772056	Mycobacterium ulcerans Agy99	4552077
YP_905600.1	CDS	rplT	NC_008611.1	1772127	1772516	D	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20	1772127..1772516	Mycobacterium ulcerans Agy99	4552078
YP_905601.1	CDS	tsnR	NC_008611.1	1772594	1773421	D	cytoplasmic protein; rRNA modification; 23S rRNA methyltransferase TsnR	1772594..1773421	Mycobacterium ulcerans Agy99	4552079
YP_905602.1	CDS	MUL_1631	NC_008611.1	1773425	1774465	R	cytoplasmic protein; hypothetical protein	complement(1773425..1774465)	Mycobacterium ulcerans Agy99	4552080
YP_905603.1	CDS	MUL_1632	NC_008611.1	1774819	1775760	D	membrane protein; PE family protein	1774819..1775760	Mycobacterium ulcerans Agy99	4552081
YP_905604.1	CDS	MUL_1633	NC_008611.1	1775871	1776782	D	cytoplasmic protein; hypothetical protein	1775871..1776782	Mycobacterium ulcerans Agy99	4552082
YP_905605.1	CDS	MUL_1634	NC_008611.1	1776792	1777574	D	membrane protein; transmembrane protein	1776792..1777574	Mycobacterium ulcerans Agy99	4552083
YP_905606.1	CDS	pheS	NC_008611.1	1777832	1778875	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha	1777832..1778875	Mycobacterium ulcerans Agy99	4552084
YP_905607.1	CDS	pheT	NC_008611.1	1778875	1781364	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta	1778875..1781364	Mycobacterium ulcerans Agy99	4552085
YP_905608.1	CDS	MUL_1638	NC_008611.1	1782645	1783691	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1782645..1783691	Mycobacterium ulcerans Agy99	4552087
YP_905609.1	CDS	MUL_1639	NC_008611.1	1785150	1786820	D	membrane protein; function unknown.; PE-PGRS family protein	1785150..1786820	Mycobacterium ulcerans Agy99	4552088
YP_905610.1	CDS	MUL_1640	NC_008611.1	1787077	1788921	D	membrane protein; function unknown.; PE-PGRS family protein	1787077..1788921	Mycobacterium ulcerans Agy99	4552089
YP_905611.1	CDS	MUL_1642	NC_008611.1	1790352	1791398	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1790352..1791398	Mycobacterium ulcerans Agy99	4552055
YP_905612.1	CDS	MUL_1643	NC_008611.1	1792173	1793507	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(1792173..1793507)	Mycobacterium ulcerans Agy99	4552056
YP_905613.1	CDS	argC	NC_008611.1	1795252	1796304	D	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase	1795252..1796304	Mycobacterium ulcerans Agy99	4552057
YP_905614.1	CDS	argJ	NC_008611.1	1796377	1797591	D	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase	1796377..1797591	Mycobacterium ulcerans Agy99	4552058
YP_905615.1	CDS	argB	NC_008611.1	1797588	1798469	D	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase	1797588..1798469	Mycobacterium ulcerans Agy99	4552059
YP_905616.1	CDS	argD	NC_008611.1	1798466	1799656	D	catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase	1798466..1799656	Mycobacterium ulcerans Agy99	4552060
YP_905617.1	CDS	argF	NC_008611.1	1799653	1800579	D	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase	1799653..1800579	Mycobacterium ulcerans Agy99	4552061
YP_905618.1	CDS	argR	NC_008611.1	1800576	1801076	D	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor	1800576..1801076	Mycobacterium ulcerans Agy99	4552062
YP_905619.1	CDS	argG	NC_008611.1	1801125	1802321	D	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase	1801125..1802321	Mycobacterium ulcerans Agy99	4552063
YP_905620.1	CDS	argH	NC_008611.1	1802416	1803828	D	catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase	1802416..1803828	Mycobacterium ulcerans Agy99	4552064
YP_905621.1	CDS	pks9	NC_008611.1	1817861	1820953	D	membrane protein; polyketide synthase Pks9	1817861..1820953	Mycobacterium ulcerans Agy99	4552068
YP_905622.1	CDS	pks11	NC_008611.1	1821108	1822169	D	membrane protein; possibly involved in the biosynthesis of secondary metabolites [catalytic activity: 3 malonyl-CoA + 4- coumaroyl-CoA = 4 CoA + naringenin chalcone + 3 CO2]; chalcone synthase, Pks11	1821108..1822169	Mycobacterium ulcerans Agy99	4552069
YP_905623.1	CDS	MUL_1658	NC_008611.1	1823233	1825215	R	cytoplasmic protein; thought to be involved in active transport of macrolide across the membrane (export) macrolide antibiotics resistance by an export mechanism. responsible for energy coupling to the transport system; ABC transporter ATP-binding protein	complement(1823233..1825215)	Mycobacterium ulcerans Agy99	4551930
YP_905624.1	CDS	aao_1	NC_008611.1	1826160	1827272	D	membrane protein; wide specificity for D-amino acids. also acts on glycine [catalytic activity: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2]; D-amino acid oxidase Aao	1826160..1827272	Mycobacterium ulcerans Agy99	4551931
YP_905625.1	CDS	MUL_1660	NC_008611.1	1827419	1830424	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	1827419..1830424	Mycobacterium ulcerans Agy99	4551932
YP_905626.1	CDS	MUL_1661	NC_008611.1	1830417	1830650	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	1830417..1830650	Mycobacterium ulcerans Agy99	4551933
YP_905627.1	CDS	gloA	NC_008611.1	1830751	1831197	D	cytoplasmic protein; role in amino acid transport and metabolism; lactoylglutathione lyase, GloA	1830751..1831197	Mycobacterium ulcerans Agy99	4551934
YP_905628.1	CDS	MUL_1664	NC_008611.1	1833833	1834432	R	cytoplasmic protein; unknwon; hypothetical protein	complement(1833833..1834432)	Mycobacterium ulcerans Agy99	4551936
YP_905629.1	CDS	MUL_1665	NC_008611.1	1834434	1835114	R	membrane protein; thought to be involved in active transport of undeterminated substrate (possibly drug) across the membrane. responsible for the translocation of the substrate across the membrane; antibiotic resistance ABC transporter efflux protein	complement(1834434..1835114)	Mycobacterium ulcerans Agy99	4551937
YP_905630.1	CDS	MUL_1666	NC_008611.1	1835186	1835953	R	membrane protein; thought to be involved in active transport of undeterminated substrate (possibly drug) across the membrane. responsible for energy coupling to the transport system; antibiotic resistance ABC transporter efflux system, ATP-binding protein	complement(1835186..1835953)	Mycobacterium ulcerans Agy99	4551938
YP_905631.1	CDS	mpg	NC_008611.1	1836013	1836624	D	responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase	1836013..1836624	Mycobacterium ulcerans Agy99	4551939
YP_905632.1	CDS	tyrS	NC_008611.1	1836636	1837928	D	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase	1836636..1837928	Mycobacterium ulcerans Agy99	4551940
YP_905633.1	CDS	MUL_1669	NC_008611.1	1838234	1838524	D	cytoplasmic protein; function unknown. no blast similarities.; hypothetical protein	1838234..1838524	Mycobacterium ulcerans Agy99	4551941
YP_905634.1	CDS	MUL_1670	NC_008611.1	1838767	1839084	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(1838767..1839084)	Mycobacterium ulcerans Agy99	4551942
YP_905635.1	CDS	MUL_1671	NC_008611.1	1839109	1839813	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(1839109..1839813)	Mycobacterium ulcerans Agy99	4551943
YP_905636.1	CDS	MUL_1674	NC_008611.1	1841822	1843768	R	membrane protein; hypothetical protein	complement(1841822..1843768)	Mycobacterium ulcerans Agy99	4551945
YP_905637.1	CDS	MUL_1676	NC_008611.1	1845469	1846515	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase from IS2404	complement(1845469..1846515)	Mycobacterium ulcerans Agy99	4551947
YP_905638.1	CDS	MUL_1677	NC_008611.1	1847317	1848810	R	cytoplasmic protein; hypothetical protein	complement(1847317..1848810)	Mycobacterium ulcerans Agy99	4551911
YP_905639.1	CDS	lprJ	NC_008611.1	1850626	1851015	D	membrane protein; lipoprotein LprJ	1850626..1851015	Mycobacterium ulcerans Agy99	4551913
YP_905640.1	CDS	MUL_1680	NC_008611.1	1851076	1851909	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	1851076..1851909	Mycobacterium ulcerans Agy99	4551914
YP_905641.1	CDS	MUL_1681	NC_008611.1	1851912	1852922	D	cytoplasmic protein; function unknown; probably involved in cellular metabolism; phosphatase	1851912..1852922	Mycobacterium ulcerans Agy99	4551915
YP_905642.1	CDS	MUL_1682	NC_008611.1	1852947	1853123	D	cytoplasmic protein; hypothetical protein	1852947..1853123	Mycobacterium ulcerans Agy99	4551916
YP_905643.1	CDS	tlyA	NC_008611.1	1853131	1853976	D	cytoplasmic protein; has a contact-dependent haemolytic activity; possibly involved in virulence (pore formation); cytotoxin/hemolysin, TlyA	1853131..1853976	Mycobacterium ulcerans Agy99	4551917
YP_905644.1	CDS	ppnK	NC_008611.1	1853973	1854896	D	catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase	1853973..1854896	Mycobacterium ulcerans Agy99	4551918
YP_905645.1	CDS	recN	NC_008611.1	1854909	1856654	D	cytoplasmic protein; involved in recombinational repair of damaged DNA.; DNA repair protein RecN	1854909..1856654	Mycobacterium ulcerans Agy99	4551919
YP_905646.1	CDS	MUL_1686	NC_008611.1	1856820	1858001	D	membrane protein; hypothetical protein	1856820..1858001	Mycobacterium ulcerans Agy99	4551920
YP_905647.1	CDS	MUL_1687	NC_008611.1	1858023	1858976	D	secreted protein; hypothetical protein	1858023..1858976	Mycobacterium ulcerans Agy99	4551921
YP_905648.1	CDS	pyrG	NC_008611.1	1859114	1860865	D	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase	1859114..1860865	Mycobacterium ulcerans Agy99	4551922
YP_905649.1	CDS	MUL_1689	NC_008611.1	1860858	1861481	D	cytoplasmic protein; NUDIX hydrolases catalyze the hydrolysis of a variety of nucleoside diphosphate derivatives; NUDIX hydrolase	1860858..1861481	Mycobacterium ulcerans Agy99	4551923
YP_905650.1	CDS	xerD	NC_008611.1	1861478	1862419	D	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD	1861478..1862419	Mycobacterium ulcerans Agy99	4551924
YP_905651.1	CDS	MUL_1691	NC_008611.1	1862426	1863019	R	cytoplasmic protein; catalyzes the O-methylation [catalytic activity: S- adenosyl-L-methionine + catechol = S-adenosyl-L- homocysteine + guaiacol]; O-methyltransferase	complement(1862426..1863019)	Mycobacterium ulcerans Agy99	4551925
YP_905652.1	CDS	MUL_1692	NC_008611.1	1863338	1864561	D	membrane protein; this is a family of myo-inositol-1-phosphate synthases. inositol-1-phosphate catalyses the conversion of glucose-6- phosphate to inositol-1-phosphate, which is then dephosphorylated to inositol. inositol phosphates play an important role in signal transduction.; myo-inositol-1-phosphate synthase	1863338..1864561	Mycobacterium ulcerans Agy99	4551926
YP_905653.1	CDS	MUL_1693	NC_008611.1	1864558	1865421	D	membrane protein; membrane associated. contains Cdd matches to polyprenyltransferase domains.; transferase	1864558..1865421	Mycobacterium ulcerans Agy99	4551927
YP_905654.1	CDS	MUL_1694	NC_008611.1	1865421	1866842	D	cytoplasmic protein; contains Cdd COG1082,sugar phosphate isomerases/epimerases [carbohydrate transport and metabolism; sugar phosphate isomerases/epimerases	1865421..1866842	Mycobacterium ulcerans Agy99	4551928
YP_905655.1	CDS	MUL_1695	NC_008611.1	1866839	1867690	D	cytoplasmic protein; contains Cdd COG1099, predicted metal-dependent hydrolases with the TIM-barrel FolD.; metal dependent hydrolase	1866839..1867690	Mycobacterium ulcerans Agy99	4551929
YP_905656.1	CDS	MUL_1697	NC_008611.1	1868798	1870177	D	membrane protein; function unknown.; hypothetical protein	1868798..1870177	Mycobacterium ulcerans Agy99	4551878
YP_905657.1	CDS	MUL_1698	NC_008611.1	1870323	1871297	D	cytoplasmic protein; hypothetical protein	1870323..1871297	Mycobacterium ulcerans Agy99	4551879
YP_905658.1	CDS	MUL_1699	NC_008611.1	1871298	1872344	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(1871298..1872344)	Mycobacterium ulcerans Agy99	4551880
YP_905659.1	CDS	MUL_1701	NC_008611.1	1874423	1875601	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; PPE family protein	complement(1874423..1875601)	Mycobacterium ulcerans Agy99	4551882
YP_905660.1	CDS	MUL_1702	NC_008611.1	1875833	1876963	R	PPE23; membrane protein; PPE family protein	complement(1875833..1876963)	Mycobacterium ulcerans Agy99	4551883
YP_905661.1	CDS	mbtH_2	NC_008611.1	1881575	1881799	R	cytoplasmic protein; thought to be involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins; protein MbtH_2	complement(1881575..1881799)	Mycobacterium ulcerans Agy99	4551885
YP_905662.1	CDS	MUL_1705	NC_008611.1	1881796	1883049	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase	complement(1881796..1883049)	Mycobacterium ulcerans Agy99	4551886
YP_905663.1	CDS	MUL_1706	NC_008611.1	1883056	1883310	R	cytoplasmic protein; hypothetical protein	complement(1883056..1883310)	Mycobacterium ulcerans Agy99	4551887
YP_905664.1	CDS	MUL_1707	NC_008611.1	1883463	1884509	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(1883463..1884509)	Mycobacterium ulcerans Agy99	4551888
YP_905665.1	CDS	speE	NC_008611.1	1884789	1886375	R	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase	complement(1884789..1886375)	Mycobacterium ulcerans Agy99	4551889
YP_905666.1	CDS	MUL_1709	NC_008611.1	1886372	1886842	R	membrane protein; hypothetical protein	complement(1886372..1886842)	Mycobacterium ulcerans Agy99	4551890
YP_905667.1	CDS	MUL_1710	NC_008611.1	1886876	1887256	R	membrane protein; function unknown, possible membrane protein; hypothetical protein	complement(1886876..1887256)	Mycobacterium ulcerans Agy99	4551891
YP_905668.1	CDS	MUL_1711	NC_008611.1	1887559	1888605	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	1887559..1888605	Mycobacterium ulcerans Agy99	4551892
YP_905669.1	CDS	MUL_1712	NC_008611.1	1888680	1889192	R	membrane protein; hypothetical protein	complement(1888680..1889192)	Mycobacterium ulcerans Agy99	4551893
YP_905670.1	CDS	MUL_1713	NC_008611.1	1889202	1889810	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(1889202..1889810)	Mycobacterium ulcerans Agy99	4551862
YP_905671.1	CDS	ruvC	NC_008611.1	1890025	1890579	D	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase	1890025..1890579	Mycobacterium ulcerans Agy99	4551863
YP_905672.1	CDS	ruvA	NC_008611.1	1890576	1891169	D	plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA	1890576..1891169	Mycobacterium ulcerans Agy99	4551864
YP_905673.1	CDS	ruvB	NC_008611.1	1891173	1892210	D	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB	1891173..1892210	Mycobacterium ulcerans Agy99	4551865
YP_905674.1	CDS	MUL_1718	NC_008611.1	1894101	1895549	R	membrane protein; PE-PGRS family protein	complement(1894101..1895549)	Mycobacterium ulcerans Agy99	4551867
YP_905675.1	CDS	MUL_1719	NC_008611.1	1895741	1896130	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, domain identity membrane protein Cdd COG3759; hypothetical protein	1895741..1896130	Mycobacterium ulcerans Agy99	4551868
YP_905676.1	CDS	MUL_1720	NC_008611.1	1896220	1896912	D	secreted protein; hypothetical protein	1896220..1896912	Mycobacterium ulcerans Agy99	4551869
YP_905677.1	CDS	MUL_1721	NC_008611.1	1897225	1898610	R	membrane protein; PE PGRS family protein	complement(1897225..1898610)	Mycobacterium ulcerans Agy99	4551870
YP_905678.1	CDS	MUL_1722	NC_008611.1	1898764	1902288	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; fatty-acid-CoA ligase FadD9	complement(1898764..1902288)	Mycobacterium ulcerans Agy99	4551871
YP_905679.1	CDS	gabT	NC_008611.1	1902469	1903809	R	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase	complement(1902469..1903809)	Mycobacterium ulcerans Agy99	4551872
YP_905680.1	CDS	yajC	NC_008611.1	1904039	1904380	D	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC	1904039..1904380	Mycobacterium ulcerans Agy99	4551873
YP_905681.1	CDS	secD	NC_008611.1	1904493	1906340	D	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD	1904493..1906340	Mycobacterium ulcerans Agy99	4551874
YP_905682.1	CDS	secF	NC_008611.1	1906345	1907685	D	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF	1906345..1907685	Mycobacterium ulcerans Agy99	4551875
YP_905683.1	CDS	MUL_1727	NC_008611.1	1907691	1909403	D	secreted protein; function unknown. possible COG0747, DdpA, ABC-type dipeptide transport system, periplasmic component [amino acid transport and metabolism]; dipeptide ABC transporter periplasmic protein	1907691..1909403	Mycobacterium ulcerans Agy99	4551876
YP_905684.1	CDS	apt	NC_008611.1	1909400	1909954	D	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase	1909400..1909954	Mycobacterium ulcerans Agy99	4551824
YP_905685.1	CDS	relA	NC_008611.1	1910022	1912394	D	Detected in the cytoplamic fraction by LCMSMS; cytoplasmic protein; involved in the metabolism of PPGPP (at the first step) in eubacteria PPGPP (guanosine 3'-diphosphate 5- 'diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. this enzyme catalyzes the formation of PPPGPP which is then hydrolysed to form PPGPP [catalytic activity: ATP + GTP = AMP + guanosine 3'- diphosphate 5-'triphosphate]; GTP pyrophosphokinase RelA	1910022..1912394	Mycobacterium ulcerans Agy99	4551825
YP_905686.1	CDS	ppiB	NC_008611.1	1912451	1913428	R	Detected in the secreted and membrane fractions by proteomics.; membrane protein; Ppiases accelerate the folding of proteins [catalytic activity: cis-trans isomerization of proline imidic peptide bonds in oligopeptides]; peptidyl-prolyl cis-trans isomerase B PpiB	complement(1912451..1913428)	Mycobacterium ulcerans Agy99	4551826
YP_905687.1	CDS	MUL_1731	NC_008611.1	1913479	1914153	D	cytoplasmic protein; involved in glyoxal pathway. thioesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid [catalytic activity: (S)-(2-hydroxyacyl)glutathione + H(2)O = glutathione + a 2- hydroxy acid anion]; Zn-dependent glyoxylase	1913479..1914153	Mycobacterium ulcerans Agy99	4551827
YP_905688.1	CDS	hisS	NC_008611.1	1914150	1915412	D	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase	1914150..1915412	Mycobacterium ulcerans Agy99	4551828
YP_905689.1	CDS	MUL_1734	NC_008611.1	1917222	1918250	D	May be regulated by LexA; cytoplasmic protein; hypothetical protein	1917222..1918250	Mycobacterium ulcerans Agy99	4551830
YP_905690.1	CDS	MUL_1736	NC_008611.1	1919880	1920782	R	Contains patatin domain. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase.; cytoplasmic protein; patatin-like phospholipase catalysing the cleavage of fatty acids from membrane lipids.; alpha-beta hydrolase superfamily esterase	complement(1919880..1920782)	Mycobacterium ulcerans Agy99	4551832
YP_905691.1	CDS	MUL_1737	NC_008611.1	1921247	1921789	R	cytoplasmic protein; function unknown. contains Cdd pfam01381, HTH_3, helix-turn-helix of DNA binding proteins.; transcriptional regulator	complement(1921247..1921789)	Mycobacterium ulcerans Agy99	4551833
YP_905692.1	CDS	dapA_1	NC_008611.1	1922733	1923623	D	cytoplasmic protein; involved in biosynthesis of diaminopimelate and lysine from aspartate semialdehyde (at the first step) [catalytic activity: l-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H(2)O]; dihydrodipicolinate synthase DapA	1922733..1923623	Mycobacterium ulcerans Agy99	4551835
YP_905693.1	CDS	MUL_1740	NC_008611.1	1923673	1924557	R	membrane protein; membrane glycine rich protein	complement(1923673..1924557)	Mycobacterium ulcerans Agy99	4551836
YP_905694.1	CDS	MUL_1741	NC_008611.1	1924619	1925134	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(1924619..1925134)	Mycobacterium ulcerans Agy99	4551837
YP_905695.1	CDS	apbA_1	NC_008611.1	1925153	1925893	R	ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase	complement(1925153..1925893)	Mycobacterium ulcerans Agy99	4551838
YP_905696.1	CDS	aspS	NC_008611.1	1926132	1927913	D	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase	1926132..1927913	Mycobacterium ulcerans Agy99	4551839
YP_905697.1	CDS	MUL_1745	NC_008611.1	1929243	1929650	R	cytoplasmic protein; hypothetical protein	complement(1929243..1929650)	Mycobacterium ulcerans Agy99	4551842
YP_905698.1	CDS	MUL_1746	NC_008611.1	1929718	1930728	D	cytoplasmic protein; function unknown, but contains Cdd COG1305, transglutaminase-like enzymes, putative cysteine proteases; hypothetical protein	1929718..1930728	Mycobacterium ulcerans Agy99	4551785
YP_905699.1	CDS	MUL_1747	NC_008611.1	1930721	1931776	D	cytoplasmic protein; hypothetical protein	1930721..1931776	Mycobacterium ulcerans Agy99	4551786
YP_905700.1	CDS	MUL_1748	NC_008611.1	1931800	1934487	R	membrane protein; hypothetical protein	complement(1931800..1934487)	Mycobacterium ulcerans Agy99	4551787
YP_905701.1	CDS	MUL_1749	NC_008611.1	1934521	1936188	R	cytoplasmic protein; function unknown, in general transglutaminases are enzymes that establish covalent links between proteins. a subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds.; transglutaminase family protein	complement(1934521..1936188)	Mycobacterium ulcerans Agy99	4551788
YP_905702.1	CDS	MUL_1750	NC_008611.1	1936324	1937430	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; proline and glycine rich transmembrane protein	complement(1936324..1937430)	Mycobacterium ulcerans Agy99	4551789
YP_905703.1	CDS	MUL_1751	NC_008611.1	1937621	1938979	D	cytoplasmic protein; recombination factor protein RarA	1937621..1938979	Mycobacterium ulcerans Agy99	4551790
YP_905704.1	CDS	MUL_1752	NC_008611.1	1939025	1939846	R	cytoplasmic protein; function unknown, thought to be involved in the persistence in the host.; hypothetical protein	complement(1939025..1939846)	Mycobacterium ulcerans Agy99	4551791
YP_905705.1	CDS	MUL_1753	NC_008611.1	1939862	1940263	D	cytoplasmic protein; hypothetical protein	1939862..1940263	Mycobacterium ulcerans Agy99	4551792
YP_905706.1	CDS	alaS	NC_008611.1	1940382	1943087	D	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase	1940382..1943087	Mycobacterium ulcerans Agy99	4551793
YP_905707.1	CDS	MUL_1755	NC_008611.1	1943088	1943600	D	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein	1943088..1943600	Mycobacterium ulcerans Agy99	4551794
YP_905708.1	CDS	MUL_1756	NC_008611.1	1943593	1944849	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	1943593..1944849	Mycobacterium ulcerans Agy99	4551795
YP_905709.1	CDS	aroE	NC_008611.1	1944846	1945679	D	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase	1944846..1945679	Mycobacterium ulcerans Agy99	4551796
YP_905710.1	CDS	aroF	NC_008611.1	1946212	1947435	D	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase	1946212..1947435	Mycobacterium ulcerans Agy99	4551798
YP_905711.1	CDS	aroK	NC_008611.1	1947444	1947998	D	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase	1947444..1947998	Mycobacterium ulcerans Agy99	4551799
YP_905712.1	CDS	aroB	NC_008611.1	1947995	1949083	D	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase	1947995..1949083	Mycobacterium ulcerans Agy99	4551800
YP_905713.1	CDS	aroD	NC_008611.1	1949080	1949520	D	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase	1949080..1949520	Mycobacterium ulcerans Agy99	4551801
YP_905714.1	CDS	MUL_1763	NC_008611.1	1949517	1950275	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	complement(1949517..1950275)	Mycobacterium ulcerans Agy99	4551802
YP_905715.1	CDS	pepQ	NC_008611.1	1950309	1951427	D	cytoplasmic protein; function unknown, hydrolyses peptides.; cytoplasmic peptidase PepQ	1950309..1951427	Mycobacterium ulcerans Agy99	4551803
YP_905716.1	CDS	efp	NC_008611.1	1951442	1952005	D	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P	1951442..1952005	Mycobacterium ulcerans Agy99	4551804
YP_905717.1	CDS	nusB	NC_008611.1	1952008	1952529	D	Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB	1952008..1952529	Mycobacterium ulcerans Agy99	4551730
YP_905718.1	CDS	MUL_1767	NC_008611.1	1952523	1952936	D	secreted protein; hypothetical protein	1952523..1952936	Mycobacterium ulcerans Agy99	4551731
YP_905719.1	CDS	MUL_1770	NC_008611.1	1955954	1957174	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(1955954..1957174)	Mycobacterium ulcerans Agy99	4551733
YP_905720.1	CDS	MUL_1771	NC_008611.1	1957220	1957792	R	cytoplasmic protein; hypothetical protein	complement(1957220..1957792)	Mycobacterium ulcerans Agy99	4551734
YP_905721.1	CDS	MUL_1772	NC_008611.1	1957808	1959130	R	cytoplasmic protein; function unknown.; beta-lactamase	complement(1957808..1959130)	Mycobacterium ulcerans Agy99	4551735
YP_905722.1	CDS	lprF	NC_008611.1	1959260	1960300	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipoprotein LprF	1959260..1960300	Mycobacterium ulcerans Agy99	4551736
YP_905723.1	CDS	MUL_1774	NC_008611.1	1960348	1962030	D	membrane protein; hypothetical protein	1960348..1962030	Mycobacterium ulcerans Agy99	4551737
YP_905724.1	CDS	MUL_1775	NC_008611.1	1962027	1963208	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; chalcone/stilbene synthase	1962027..1963208	Mycobacterium ulcerans Agy99	4551738
YP_905725.1	CDS	MUL_1776	NC_008611.1	1963268	1964500	D	cytoplasmic protein; involved in sulfation: activity towards typical ceramide glycolipids and trehalose glycolipids.; glycolipid sulfotransferase	1963268..1964500	Mycobacterium ulcerans Agy99	4551739
YP_905726.1	CDS	MUL_1777	NC_008611.1	1964382	1965314	D	cytoplasmic protein; involved in sulfation: activity towards typical ceramide glycolipids and trehalose glycolipids.; glycolipid sulfotransferase	1964382..1965314	Mycobacterium ulcerans Agy99	4551740
YP_905727.1	CDS	pyrR	NC_008611.1	1966139	1966702	D	regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase	1966139..1966702	Mycobacterium ulcerans Agy99	4551742
YP_905728.1	CDS	pyrB	NC_008611.1	1966699	1967661	D	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit	1966699..1967661	Mycobacterium ulcerans Agy99	4551743
YP_905729.1	CDS	pyrC	NC_008611.1	1967658	1968950	D	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase	1967658..1968950	Mycobacterium ulcerans Agy99	4551744
YP_905730.1	CDS	MUL_1782	NC_008611.1	1968947	1969456	D	secreted protein	1968947..1969456	Mycobacterium ulcerans Agy99	4551745
YP_905731.1	CDS	carA	NC_008611.1	1969453	1970580	D	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit	1969453..1970580	Mycobacterium ulcerans Agy99	4551746
YP_905732.1	CDS	carB	NC_008611.1	1970672	1974037	D	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit	1970672..1974037	Mycobacterium ulcerans Agy99	4551747
YP_905733.1	CDS	pyrF	NC_008611.1	1974034	1974870	D	type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase	1974034..1974870	Mycobacterium ulcerans Agy99	4551748
YP_905734.1	CDS	mihF	NC_008611.1	1975835	1976152	D	Detected in the cytoplamic fraction by LCMSMS. Also detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; integration host factor MihF	1975835..1976152	Mycobacterium ulcerans Agy99	4551711
YP_905735.1	CDS	gmk	NC_008611.1	1976249	1976875	D	Essential for recycling GMP and indirectly, cGMP; guanylate kinase	1976249..1976875	Mycobacterium ulcerans Agy99	4551712
YP_905736.1	CDS	rpoZ	NC_008611.1	1976962	1977294	D	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega	1976962..1977294	Mycobacterium ulcerans Agy99	4551713
YP_905737.1	CDS	dfp	NC_008611.1	1977310	1978551	D	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase	1977310..1978551	Mycobacterium ulcerans Agy99	4551714
YP_905738.1	CDS	metK	NC_008611.1	1978680	1979891	D	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase	1978680..1979891	Mycobacterium ulcerans Agy99	4551715
YP_905739.1	CDS	MUL_1792	NC_008611.1	1979973	1980581	R	secreted protein; hypothetical protein	complement(1979973..1980581)	Mycobacterium ulcerans Agy99	4551716
YP_905740.1	CDS	MUL_1793	NC_008611.1	1980641	1982098	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism; monoxygenase	complement(1980641..1982098)	Mycobacterium ulcerans Agy99	4551717
YP_905741.1	CDS	lipH	NC_008611.1	1982270	1983241	R	cytoplasmic protein; lipase LipH	complement(1982270..1983241)	Mycobacterium ulcerans Agy99	4551718
YP_905742.1	CDS	lipI	NC_008611.1	1983268	1984242	R	cytoplasmic protein; lipase LipI	complement(1983268..1984242)	Mycobacterium ulcerans Agy99	4551719
YP_905743.1	CDS	MUL_1796	NC_008611.1	1984193	1984978	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; membrane protein	1984193..1984978	Mycobacterium ulcerans Agy99	4551720
YP_905744.1	CDS	priA	NC_008611.1	1985089	1987035	D	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA	1985089..1987035	Mycobacterium ulcerans Agy99	4551721
YP_905745.1	CDS	MUL_1798	NC_008611.1	1987053	1987877	R	cytoplasmic protein; causes methylation; methyltransferase	complement(1987053..1987877)	Mycobacterium ulcerans Agy99	4551722
YP_905746.1	CDS	MUL_1799	NC_008611.1	1988114	1989160	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(1988114..1989160)	Mycobacterium ulcerans Agy99	4551723
YP_905747.1	CDS	MUL_1800	NC_008611.1	1989129	1989959	D	cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein	1989129..1989959	Mycobacterium ulcerans Agy99	4551724
YP_905748.1	CDS	MUL_1801	NC_008611.1	1990082	1990906	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; causes methylation; methyltransferase	complement(1990082..1990906)	Mycobacterium ulcerans Agy99	4551725
YP_905749.1	CDS	fmt	NC_008611.1	1991108	1992046	D	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase	1991108..1992046	Mycobacterium ulcerans Agy99	4551726
YP_905750.1	CDS	fmu	NC_008611.1	1992115	1993488	D	cytoplasmic protein; Fmu protein	1992115..1993488	Mycobacterium ulcerans Agy99	4551727
YP_905751.1	CDS	rpe	NC_008611.1	1993546	1994244	D	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase	1993546..1994244	Mycobacterium ulcerans Agy99	4551728
YP_905752.1	CDS	ribG	NC_008611.1	1994252	1995271	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; involved in riboflavin biosynthesis (at the second and third steps) converts 2,5-diamino-6-(ribosylamino)- 4(3H)-pyrimidinone 5'-phosphate into 5-amino-6- (ribosylamino)-2,4(1H,3H)-pyrimidinedione 5'-phosphate [catalytic activity 1: 2,5-diamino-6-hydroxy-4-(5- phosphoribosylamino)pyrimidine + H(2)O = 5-amino-6-(5- phosphoribosylamino)uracil + NH(3)] [catalytic activity 2: 5-amino-6-(5-phosphoribitylamino)uracil + NADP(+) = 5- amino-6-(5-phosphoribosylamino)uracil + NADPH]; bifunctional riboflavin biosynthesis protein RibG	1994252..1995271	Mycobacterium ulcerans Agy99	4551729
YP_905753.1	CDS	MUL_1806	NC_008611.1	1995276	1996829	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in transport of aminoglycosides and tetracycline across the membrane (export): drug resistance by an export mechanism (conferes resistance to toxic compounds by removing them for the cells) responsible for the translocation of the substrate across the membrane.; aminoglycosides/tetracycline-transport integral membrane protein	complement(1995276..1996829)	Mycobacterium ulcerans Agy99	4551693
YP_905754.1	CDS	lprG	NC_008611.1	1996829	1997539	R	Detected in the membrane fraction and the cytoplamic fraction by LC.MS/MS.; membrane protein; lipoprotein LprG	complement(1996829..1997539)	Mycobacterium ulcerans Agy99	4551694
YP_905755.1	CDS	ribC	NC_008611.1	1997640	1998263	D	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha	1997640..1998263	Mycobacterium ulcerans Agy99	4551695
YP_905756.1	CDS	ribA2	NC_008611.1	1998402	1999679	D	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein	1998402..1999679	Mycobacterium ulcerans Agy99	4551696
YP_905757.1	CDS	ribH	NC_008611.1	1999676	2000158	D	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase	1999676..2000158	Mycobacterium ulcerans Agy99	4551697
YP_905758.1	CDS	MUL_1811	NC_008611.1	2000155	2000625	D	membrane protein; hypothetical protein	2000155..2000625	Mycobacterium ulcerans Agy99	4551698
YP_905759.1	CDS	lprH	NC_008611.1	2000675	2001298	D	secreted protein; lipoprotein LprH	2000675..2001298	Mycobacterium ulcerans Agy99	4551699
YP_905760.1	CDS	MUL_1813	NC_008611.1	2001395	2002963	D	May be regulated by LexA; Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; 13e12 repeat-containing protein	2001395..2002963	Mycobacterium ulcerans Agy99	4551700
YP_905761.1	CDS	uvrC	NC_008611.1	2002891	2004777	D	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C	2002891..2004777	Mycobacterium ulcerans Agy99	4551701
YP_905762.1	CDS	MUL_1815	NC_008611.1	2004774	2005694	D	cytoplasmic protein; hypothetical protein	2004774..2005694	Mycobacterium ulcerans Agy99	4551702
YP_905763.1	CDS	MUL_1816	NC_008611.1	2005691	2006767	D	Detected in the cytoplamic fraction.; membrane protein; hypothetical protein	2005691..2006767	Mycobacterium ulcerans Agy99	4551703
YP_905764.1	CDS	whiA	NC_008611.1	2006764	2007741	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein WhiA	2006764..2007741	Mycobacterium ulcerans Agy99	4551704
YP_905765.1	CDS	MUL_1818	NC_008611.1	2007844	2009226	D	cytoplasmic protein; hypothetical protein	2007844..2009226	Mycobacterium ulcerans Agy99	4551705
YP_905766.1	CDS	lipO	NC_008611.1	2009227	2010504	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; function unknown, but supposed involved in lipid metabolism; esterase LipO	complement(2009227..2010504)	Mycobacterium ulcerans Agy99	4551706
YP_905767.1	CDS	MUL_1821	NC_008611.1	2012138	2012941	R	cytoplasmic protein; hypothetical protein	complement(2012138..2012941)	Mycobacterium ulcerans Agy99	4551708
YP_905768.1	CDS	MUL_1823	NC_008611.1	2014207	2014911	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	2014207..2014911	Mycobacterium ulcerans Agy99	4551710
YP_905769.1	CDS	MUL_1824	NC_008611.1	2014936	2015253	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	2014936..2015253	Mycobacterium ulcerans Agy99	4551675
YP_905770.1	CDS	MUL_1826	NC_008611.1	2018316	2019737	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; dehydrogenase	2018316..2019737	Mycobacterium ulcerans Agy99	4551677
YP_905771.1	CDS	MUL_1827	NC_008611.1	2019745	2020362	R	membrane protein; hypothetical protein	complement(2019745..2020362)	Mycobacterium ulcerans Agy99	4551678
YP_905772.1	CDS	gap	NC_008611.1	2020646	2021665	D	Also detected in the extracellular matrix and the membrane fraction by proteomics.; cytoplasmic protein; involved in second phase of glycolysis (first step) [catalytic activity: D-glyceraldehyde 3-phosphate + phosphate + NAD(+) = 3-phospho-D-glyceroyl phosphate + NADH]; glyceraldehyde 3-phosphate dehydrogenase Gap	2020646..2021665	Mycobacterium ulcerans Agy99	4551679
YP_905773.1	CDS	pgk	NC_008611.1	2021678	2022928	D	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase	2021678..2022928	Mycobacterium ulcerans Agy99	4551680
YP_905774.1	CDS	tpiA	NC_008611.1	2022925	2023710	D	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase	2022925..2023710	Mycobacterium ulcerans Agy99	4551681
YP_905775.1	CDS	MUL_1833	NC_008611.1	2028316	2029044	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; possibly involved in transcriptional mechanism.; GntR family transcriptional regulator	2028316..2029044	Mycobacterium ulcerans Agy99	4551684
YP_905776.1	CDS	MUL_1834	NC_008611.1	2029078	2029422	R	membrane protein; hypothetical protein	complement(2029078..2029422)	Mycobacterium ulcerans Agy99	4551685
YP_905777.1	CDS	secG	NC_008611.1	2029580	2029813	R	membrane protein; involved in protein export. participates in a early event of protein translocation.; preprotein translocase subunit SecG	complement(2029580..2029813)	Mycobacterium ulcerans Agy99	4551686
YP_905778.1	CDS	MUL_1836	NC_008611.1	2029883	2032690	D	catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase	2029883..2032690	Mycobacterium ulcerans Agy99	4551687
YP_905779.1	CDS	MUL_1837	NC_008611.1	2032714	2033865	R	secreted protein; PE-PGRS family protein	complement(2032714..2033865)	Mycobacterium ulcerans Agy99	4551688
YP_905780.1	CDS	MUL_1838	NC_008611.1	2033866	2034981	R	secreted protein; PE-PGRS family protein	complement(2033866..2034981)	Mycobacterium ulcerans Agy99	4551689
YP_905781.1	CDS	MUL_1839	NC_008611.1	2035077	2035475	R	cytoplasmic protein; hypothetical protein	complement(2035077..2035475)	Mycobacterium ulcerans Agy99	4551690
YP_905782.1	CDS	devB	NC_008611.1	2035525	2036268	R	Detected in the cytoplasmic fraction by proteomics.; cytoplasmic protein; involved in pentose phosphate pathway. hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate. [catalytic activity : 6-phospho-D-glucono-1,5-lactone + H(2)O = 6- phospho-D-gluconate]; 6-phosphogluconolactonase	complement(2035525..2036268)	Mycobacterium ulcerans Agy99	4551691
YP_905783.1	CDS	opcA	NC_008611.1	2036265	2037176	R	cytoplasmic protein; may be involved in the functional assembly of glucose 6-phosphate dehydrogenase; OXPP cycle protein OpcA	complement(2036265..2037176)	Mycobacterium ulcerans Agy99	4551692
YP_905784.1	CDS	zwf2	NC_008611.1	2037226	2038779	R	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase	complement(2037226..2038779)	Mycobacterium ulcerans Agy99	4551662
YP_905785.1	CDS	tal	NC_008611.1	2038776	2039897	R	catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase	complement(2038776..2039897)	Mycobacterium ulcerans Agy99	4551663
YP_905786.1	CDS	tkt	NC_008611.1	2039913	2042015	R	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase	complement(2039913..2042015)	Mycobacterium ulcerans Agy99	4551664
YP_905787.1	CDS	ctaB	NC_008611.1	2042303	2043277	D	converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase	2042303..2043277	Mycobacterium ulcerans Agy99	4551665
YP_905788.1	CDS	MUL_1848	NC_008611.1	2044863	2045909	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2044863..2045909	Mycobacterium ulcerans Agy99	4551668
YP_905789.1	CDS	MUL_1849	NC_008611.1	2046040	2047374	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	2046040..2047374	Mycobacterium ulcerans Agy99	4551669
YP_905790.1	CDS	MUL_1853	NC_008611.1	2051104	2052150	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2051104..2052150)	Mycobacterium ulcerans Agy99	4551672
YP_905791.1	CDS	MUL_1854	NC_008611.1	2054860	2055870	D	cytoplasmic protein; involved in transcriptional mechanism; transcriptional activator protein	2054860..2055870	Mycobacterium ulcerans Agy99	4551673
YP_905792.1	CDS	qor	NC_008611.1	2056197	2057207	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; catalyzes the one electron reduction of certain quinones [catalytic activity: NADPH + quinone = NADP+ + semiquinone]; quinone reductase Qor	complement(2056197..2057207)	Mycobacterium ulcerans Agy99	4551674
YP_905793.1	CDS	MUL_1856	NC_008611.1	2057206	2058060	D	cytoplasmic protein; hypothetical protein	2057206..2058060	Mycobacterium ulcerans Agy99	4551563
YP_905794.1	CDS	MUL_1857	NC_008611.1	2058010	2058939	R	membrane protein; thought to be involved in active transport of antibiotic across the membrane (export): unidentified antibiotic resistance by an export mechanism. responsible for the translocation of the substrate across the membrane.; antibiotic ABC transporter transmembrane protein	complement(2058010..2058939)	Mycobacterium ulcerans Agy99	4551564
YP_905795.1	CDS	MUL_1858	NC_008611.1	2059010	2059798	R	membrane protein; thought to be involved in active transport of antibiotic across the membrane (export): unidentified antibiotic resistance by an export mechanism. responsible for the translocation of the substrate across the membrane.; antibiotic ABC transporter transmembrane protein	complement(2059010..2059798)	Mycobacterium ulcerans Agy99	4551565
YP_905796.1	CDS	MUL_1859	NC_008611.1	2059795	2060706	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; thought to be involved in active transport of antibiotic across the membrane (export): unidentified antibiotic resistance by an export mechanism. responsible for energy coupling to the transport system.; antibiotic ABC transporter ATP-binding protein	complement(2059795..2060706)	Mycobacterium ulcerans Agy99	4551566
YP_905797.1	CDS	MUL_1860	NC_008611.1	2060751	2062568	R	membrane protein; integral membrane protein	complement(2060751..2062568)	Mycobacterium ulcerans Agy99	4551567
YP_905798.1	CDS	MUL_1861	NC_008611.1	2062649	2063434	D	cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein	2062649..2063434	Mycobacterium ulcerans Agy99	4551568
YP_905799.1	CDS	MUL_1862	NC_008611.1	2063431	2064876	D	cytoplasmic protein; hypothetical protein	2063431..2064876	Mycobacterium ulcerans Agy99	4551569
YP_905800.1	CDS	MUL_1863	NC_008611.1	2064873	2066072	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	2064873..2066072	Mycobacterium ulcerans Agy99	4551570
YP_905801.1	CDS	MUL_1864	NC_008611.1	2066069	2066851	D	Detected in the extracellular matrix, the membrane and the cytoplasmic fractions by proteomics.; membrane protein; thought to be involved in active transport across the membrane. responsible for energy coupling to the transport system.; ABC transporter ATP-binding protein	2066069..2066851	Mycobacterium ulcerans Agy99	4551571
YP_905802.1	CDS	csd	NC_008611.1	2066854	2068107	D	cytoplasmic protein; catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, l- selenocysteine, and L-selenocystine to produce L-alanine; cysteine desulfurase	2066854..2068107	Mycobacterium ulcerans Agy99	4551572
YP_905803.1	CDS	MUL_1866	NC_008611.1	2068110	2068601	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; nitrogen fixation-like protein	2068110..2068601	Mycobacterium ulcerans Agy99	4551573
YP_905804.1	CDS	MUL_1867	NC_008611.1	2068594	2068941	D	cytoplasmic protein; hypothetical protein	2068594..2068941	Mycobacterium ulcerans Agy99	4551574
YP_905805.1	CDS	fadE15	NC_008611.1	2070605	2072434	R	Detected in the cytoplasmic fraction by proteomics.; cytoplasmic protein; function unknown, but involvement in lipid degradation.; acyl-CoA dehydrogenase FadE15	complement(2070605..2072434)	Mycobacterium ulcerans Agy99	4551576
YP_905806.1	CDS	MUL_1870	NC_008611.1	2072540	2073358	R	membrane protein; PE-PGRS family protein	complement(2072540..2073358)	Mycobacterium ulcerans Agy99	4551577
YP_905807.1	CDS	MUL_1873	NC_008611.1	2074757	2075074	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(2074757..2075074)	Mycobacterium ulcerans Agy99	4551580
YP_905808.1	CDS	MUL_1874	NC_008611.1	2075099	2075803	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(2075099..2075803)	Mycobacterium ulcerans Agy99	4551581
YP_905809.1	CDS	nrdH	NC_008611.1	2077472	2077711	D	cytoplasmic protein; involved in electron transfer system for ribonucleotide reductase system NRDEF.; glutaredoxin electron transport component of NRDEF (glutaredoxin-like protein) NrdH	2077472..2077711	Mycobacterium ulcerans Agy99	4551546
YP_905810.1	CDS	nrdI	NC_008611.1	2077755	2078216	D	in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein	2077755..2078216	Mycobacterium ulcerans Agy99	4551547
YP_905811.1	CDS	nrdE	NC_008611.1	2078270	2080351	D	Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha	2078270..2080351	Mycobacterium ulcerans Agy99	4551548
YP_905812.1	CDS	MUL_1879	NC_008611.1	2080466	2081209	D	cytoplasmic protein; involved in transcriptional mechanism; AsnC family transcriptional regulator	2080466..2081209	Mycobacterium ulcerans Agy99	4551549
YP_905813.1	CDS	MUL_1880	NC_008611.1	2081328	2082878	D	cytoplasmic protein; function unknown, involved in cellular metabolism.; monooxygenase	2081328..2082878	Mycobacterium ulcerans Agy99	4551550
YP_905814.1	CDS	MUL_1881	NC_008611.1	2082868	2083407	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	complement(2082868..2083407)	Mycobacterium ulcerans Agy99	4551551
YP_905815.1	CDS	MUL_1882	NC_008611.1	2083391	2083837	R	cytoplasmic protein; hypothetical protein	complement(2083391..2083837)	Mycobacterium ulcerans Agy99	4551552
YP_905816.1	CDS	nrdF	NC_008611.1	2084047	2085021	D	B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta	2084047..2085021	Mycobacterium ulcerans Agy99	4551553
YP_905817.1	CDS	MUL_1884	NC_008611.1	2085188	2085532	D	Detected in the cytoplasmic and secreted fractions by 2D-LC-MS/MS.; cytoplasmic protein; hypothetical protein	2085188..2085532	Mycobacterium ulcerans Agy99	4551554
YP_905818.1	CDS	adh	NC_008611.1	2085521	2086561	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; alcohol dehydrogenase catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD: ethanol + NAD = acetaldehyde + NADH. belongs to the zinc-containing 'long-chain' alcohol dehydrogenases.; NADP-dependent alcohol dehydrogenase Adh	complement(2085521..2086561)	Mycobacterium ulcerans Agy99	4551555
YP_905819.1	CDS	fecB	NC_008611.1	2086695	2087789	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; may be involved in active transport of FeIII- decitrate across the membrane (import); FEIII-dicitrate-binding periplasmic lipoprotein FecB	complement(2086695..2087789)	Mycobacterium ulcerans Agy99	4551556
YP_905820.1	CDS	ctaD	NC_008611.1	2087968	2089689	D	Detected in the membrane fraction by proteomics.; cytoplasmic protein; cytochrome C oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. electrons originating in cytochrome C are transferred via the copper a center of subunit 2 and HemE a of subunit 1 to the bimetallic center formed by HemE A3 and copper B [catalytic activity: 4 ferrocytochrome C + O(2) = 2 H(2)O + 4 ferricytochrome C]; cytochrome C oxidase polypeptide I CtaD	2087968..2089689	Mycobacterium ulcerans Agy99	4551557
YP_905821.1	CDS	serB2	NC_008611.1	2089748	2090977	D	cytoplasmic protein; generates serine from phosphoserine [catalytic activity: phosphoserine + H(2)O = serine + phosphate]; phosphoserine phosphatase SerB2	2089748..2090977	Mycobacterium ulcerans Agy99	4551558
YP_905822.1	CDS	MUL_1890	NC_008611.1	2091390	2092436	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2091390..2092436)	Mycobacterium ulcerans Agy99	4551560
YP_905823.1	CDS	MUL_1891	NC_008611.1	2092829	2093308	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	2092829..2093308	Mycobacterium ulcerans Agy99	4551561
YP_905824.1	CDS	MUL_1892	NC_008611.1	2093373	2095283	D	membrane protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	2093373..2095283	Mycobacterium ulcerans Agy99	4551562
YP_905825.1	CDS	hycD	NC_008611.1	2095289	2096239	D	membrane protein; involved in hydrogen metabolism; FHL pathway.; formate hydrogenlyase HycD	2095289..2096239	Mycobacterium ulcerans Agy99	4551507
YP_905826.1	CDS	hycP	NC_008611.1	2096244	2096906	D	membrane protein; involved in hydrogen metabolism.; hydrogenase HycP	2096244..2096906	Mycobacterium ulcerans Agy99	4551508
YP_905827.1	CDS	hycQ	NC_008611.1	2096906	2098372	D	membrane protein; possibly involved in hydrogen metabolism.; hydrogenase HycQ	2096906..2098372	Mycobacterium ulcerans Agy99	4551509
YP_905828.1	CDS	MUL_1897	NC_008611.1	2099963	2100805	D	membrane protein; thought to be involved in active transport of undeterminated substrate (possibly iron) across the membrane. responsible for energy coupling to the transport system.; ABC transporter ATP-binding protein	2099963..2100805	Mycobacterium ulcerans Agy99	4551511
YP_905829.1	CDS	MUL_1898	NC_008611.1	2100802	2101644	D	cytoplasmic protein; hypothetical protein	2100802..2101644	Mycobacterium ulcerans Agy99	4551512
YP_905830.1	CDS	echA17	NC_008611.1	2101641	2102414	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	2101641..2102414	Mycobacterium ulcerans Agy99	4551513
YP_905831.1	CDS	MUL_1900	NC_008611.1	2102425	2103408	D	cytoplasmic protein; hypothetical protein	2102425..2103408	Mycobacterium ulcerans Agy99	4551514
YP_905832.1	CDS	MUL_1901	NC_008611.1	2103573	2104610	D	cytoplasmic protein; hypothetical protein	2103573..2104610	Mycobacterium ulcerans Agy99	4551515
YP_905833.1	CDS	MUL_1902	NC_008611.1	2104685	2105587	D	C-term extended due to frame shift mutation. This CDS now overlaps d/s CDS.; Detected in the secreted protein fraction by 2D-LC- MS/MS.; secreted protein; hypothetical protein	2104685..2105587	Mycobacterium ulcerans Agy99	4551516
YP_905834.1	CDS	MUL_5115	NC_008611.1	2105374	2105763	R	overlaps neigbouring CDS due to frame shift mutation that extends MUL_1902.; cytoplasmic protein; hypothetical protein	complement(2105374..2105763)	Mycobacterium ulcerans Agy99	4551517
YP_905835.1	CDS	MUL_1903	NC_008611.1	2105780	2106847	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(2105780..2106847)	Mycobacterium ulcerans Agy99	4551518
YP_905836.1	CDS	MUL_1904	NC_008611.1	2107273	2108010	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, possibly involved in cellular metabolism.; transferase	2107273..2108010	Mycobacterium ulcerans Agy99	4551519
YP_905837.1	CDS	MUL_1905	NC_008611.1	2108031	2108810	R	membrane protein; function unknown; probably involved in lipid metabolism.; lysophospholipase	complement(2108031..2108810)	Mycobacterium ulcerans Agy99	4551520
YP_905838.1	CDS	MUL_1906	NC_008611.1	2108835	2109380	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(2108835..2109380)	Mycobacterium ulcerans Agy99	4551521
YP_905839.1	CDS	phrI	NC_008611.1	2109507	2110850	R	cytoplasmic protein; function unknown, possible role in DNA replication, recombination, and repair.; DNA photolyase, PhrI	complement(2109507..2110850)	Mycobacterium ulcerans Agy99	4551522
YP_905840.1	CDS	MUL_1908	NC_008611.1	2110859	2111338	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown. possibly involved in signal transduction mechanisms.; tryptophan-rich sensory protein	complement(2110859..2111338)	Mycobacterium ulcerans Agy99	4551523
YP_905841.1	CDS	MUL_1909	NC_008611.1	2111335	2113449	R	secreted protein; function unknown. thought to be involved in drug export.; transmembrane transport protein	complement(2111335..2113449)	Mycobacterium ulcerans Agy99	4551524
YP_905842.1	CDS	MUL_1912	NC_008611.1	2115519	2116223	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	2115519..2116223	Mycobacterium ulcerans Agy99	4551489
YP_905843.1	CDS	MUL_1913	NC_008611.1	2116248	2116565	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	2116248..2116565	Mycobacterium ulcerans Agy99	4551490
YP_905844.1	CDS	MUL_1914	NC_008611.1	2116864	2117271	R	cytoplasmic protein; hypothetical protein	complement(2116864..2117271)	Mycobacterium ulcerans Agy99	4551491
YP_905845.1	CDS	MUL_1916	NC_008611.1	2118274	2118969	D	membrane protein; hypothetical protein	2118274..2118969	Mycobacterium ulcerans Agy99	4551493
YP_905846.1	CDS	MUL_1918	NC_008611.1	2120386	2121372	D	Detected in the cytoplamic fraction by LCMSMS; cytoplasmic protein; function unknown, probably involved in cellular metabolism.; dehydrogenase/reductase	2120386..2121372	Mycobacterium ulcerans Agy99	4551495
YP_905847.1	CDS	MUL_1919	NC_008611.1	2121369	2122613	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; transferase	complement(2121369..2122613)	Mycobacterium ulcerans Agy99	4551496
YP_905848.1	CDS	MUL_1920	NC_008611.1	2122705	2124300	R	cytoplasmic protein; hypothetical protein	complement(2122705..2124300)	Mycobacterium ulcerans Agy99	4551497
YP_905849.1	CDS	MUL_1921	NC_008611.1	2124297	2125115	R	cytoplasmic protein; hypothetical protein	complement(2124297..2125115)	Mycobacterium ulcerans Agy99	4551498
YP_905850.1	CDS	fixA	NC_008611.1	2125388	2126179	D	Detected in the cytoplasmic, the membrane and the extracellular matrix fractions by proteomics.; cytoplasmic protein; the electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. it transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase); electron transfer flavoprotein FixA	2125388..2126179	Mycobacterium ulcerans Agy99	4551499
YP_905851.1	CDS	fixB	NC_008611.1	2126227	2127183	D	Detected in the cytoplasmic fraction by LC-MS/MS. Also detected in the extracellular matrix and the membrane fraction by proteomics.; cytoplasmic protein; the electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. it transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase); electron transfer flavoprotein FixB	2126227..2127183	Mycobacterium ulcerans Agy99	4551500
YP_905852.1	CDS	MUL_1924	NC_008611.1	2127284	2128144	D	cytoplasmic protein; hypothetical protein	2127284..2128144	Mycobacterium ulcerans Agy99	4551501
YP_905853.1	CDS	MUL_1925	NC_008611.1	2128144	2128980	D	membrane protein; hypothetical protein	2128144..2128980	Mycobacterium ulcerans Agy99	4551502
YP_905854.1	CDS	iscS	NC_008611.1	2129621	2130802	D	cytoplasmic protein; catalyzes the removal of elemental sulfur from cysteine to produce alanine.; cysteine desulfurase IscS	2129621..2130802	Mycobacterium ulcerans Agy99	4551504
YP_905855.1	CDS	mnmA	NC_008611.1	2130799	2131890	D	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA	2130799..2131890	Mycobacterium ulcerans Agy99	4551505
YP_905856.1	CDS	lpqA	NC_008611.1	2131887	2132516	R	secreted protein; lipoprotein LpqA	complement(2131887..2132516)	Mycobacterium ulcerans Agy99	4551506
YP_905857.1	CDS	MUL_1930	NC_008611.1	2132612	2133625	D	cytoplasmic protein; hypothetical protein	2132612..2133625	Mycobacterium ulcerans Agy99	4551271
YP_905858.1	CDS	MUL_1932	NC_008611.1	2135365	2136411	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2135365..2136411	Mycobacterium ulcerans Agy99	4551273
YP_905859.1	CDS	ligA	NC_008611.1	2137125	2139176	D	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA	2137125..2139176	Mycobacterium ulcerans Agy99	4551274
YP_905860.1	CDS	MUL_1934	NC_008611.1	2139237	2139842	D	cytoplasmic protein; possibly involved in a transcriptional mechanism; regulatory protein	2139237..2139842	Mycobacterium ulcerans Agy99	4551275
YP_905861.1	CDS	MUL_1935	NC_008611.1	2140039	2140443	D	membrane protein; hypothetical protein	2140039..2140443	Mycobacterium ulcerans Agy99	4551276
YP_905862.1	CDS	MUL_1937	NC_008611.1	2143348	2144010	R	cytoplasmic protein; hypothetical protein	complement(2143348..2144010)	Mycobacterium ulcerans Agy99	4551278
YP_905863.1	CDS	gatC	NC_008611.1	2144162	2144461	D	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C	2144162..2144461	Mycobacterium ulcerans Agy99	4551279
YP_905864.1	CDS	gatA	NC_008611.1	2144458	2145939	D	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A	2144458..2145939	Mycobacterium ulcerans Agy99	4551280
YP_905865.1	CDS	pfkA	NC_008611.1	2146039	2147070	D	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase	2146039..2147070	Mycobacterium ulcerans Agy99	4551281
YP_905866.1	CDS	gatB	NC_008611.1	2147129	2148637	D	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B	2147129..2148637	Mycobacterium ulcerans Agy99	4551282
YP_905867.1	CDS	lppZ	NC_008611.1	2149298	2150467	R	membrane protein; lipoprotein LppZ	complement(2149298..2150467)	Mycobacterium ulcerans Agy99	4551284
YP_905868.1	CDS	MUL_1944	NC_008611.1	2150650	2151498	D	membrane protein; hypothetical protein	2150650..2151498	Mycobacterium ulcerans Agy99	4551285
YP_905869.1	CDS	cfp6	NC_008611.1	2151507	2151866	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown function (putative membrane protein); low molecular weight protein antigen 6, Cfp6	complement(2151507..2151866)	Mycobacterium ulcerans Agy99	4551286
YP_905870.1	CDS	MUL_1946	NC_008611.1	2151938	2152069	D	cytoplasmic protein; hypothetical protein	2151938..2152069	Mycobacterium ulcerans Agy99	4551287
YP_905871.1	CDS	ilvB1	NC_008611.1	2152213	2154069	D	acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 1 catalytic subunit	2152213..2154069	Mycobacterium ulcerans Agy99	4551288
YP_905872.1	CDS	ilvH	NC_008611.1	2154069	2154578	D	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit	2154069..2154578	Mycobacterium ulcerans Agy99	4551256
YP_905873.1	CDS	ilvC	NC_008611.1	2154651	2155652	D	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase	2154651..2155652	Mycobacterium ulcerans Agy99	4551257
YP_905874.1	CDS	MUL_1950	NC_008611.1	2155739	2156341	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(2155739..2156341)	Mycobacterium ulcerans Agy99	4551258
YP_905875.1	CDS	serA1	NC_008611.1	2157822	2159408	D	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase	2157822..2159408	Mycobacterium ulcerans Agy99	4551260
YP_905876.1	CDS	leuB	NC_008611.1	2159464	2160483	D	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase	2159464..2160483	Mycobacterium ulcerans Agy99	4551261
YP_905877.1	CDS	MUL_1956	NC_008611.1	2161955	2162674	D	cytoplasmic protein; isomerizes HHDD (2-hydroxy-hept-2,4-diene-1,7- dioate) to ohed (2-oxo-hept-3-ene-1,7-dioate); 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase	2161955..2162674	Mycobacterium ulcerans Agy99	4551263
YP_905878.1	CDS	gltX	NC_008611.1	2162734	2164140	D	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase	2162734..2164140	Mycobacterium ulcerans Agy99	4551264
YP_905879.1	CDS	MUL_1960	NC_008611.1	2164517	2165038	R	cytoplasmic protein; hypothetical protein	complement(2164517..2165038)	Mycobacterium ulcerans Agy99	4551267
YP_905880.1	CDS	MUL_1961	NC_008611.1	2165191	2166156	D	cytoplasmic protein; hypothetical protein	2165191..2166156	Mycobacterium ulcerans Agy99	4551268
YP_905881.1	CDS	MUL_1963	NC_008611.1	2169323	2170369	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2169323..2170369	Mycobacterium ulcerans Agy99	4551270
YP_905882.1	CDS	MUL_1964	NC_008611.1	2170493	2171827	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(2170493..2171827)	Mycobacterium ulcerans Agy99	4551184
YP_905883.1	CDS	mmpS1	NC_008611.1	2171917	2172324	R	membrane protein; membrane protein MmpS1	complement(2171917..2172324)	Mycobacterium ulcerans Agy99	4551185
YP_905884.1	CDS	bioF2_2	NC_008611.1	2172564	2173814	R	cytoplasmic protein; could be involved in biotin biosynthesis (at the first step) [catalytic activity: 6-carboxyhexanoyl-CoA + L- alanine = 8-amino-7-oxononanoate + CoA + CO2]; 8-amino-7-oxononanoate synthase	complement(2172564..2173814)	Mycobacterium ulcerans Agy99	4551186
YP_905885.1	CDS	MUL_1967	NC_008611.1	2174358	2175059	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	complement(2174358..2175059)	Mycobacterium ulcerans Agy99	4551187
YP_905886.1	CDS	leuC	NC_008611.1	2175142	2176563	D	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit	2175142..2176563	Mycobacterium ulcerans Agy99	4551188
YP_905887.1	CDS	leuD	NC_008611.1	2176588	2177184	D	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit	2176588..2177184	Mycobacterium ulcerans Agy99	4551189
YP_905888.1	CDS	hupB	NC_008611.1	2177409	2178098	D	Detected in the cytoplasmic fraction by LC-MS/MS. Also detected in the extracellular matrix and the membrane fraction by proteomics.; cytoplasmic protein; this protein belongs to the histone like family of prokaryotic DNA-binding proteins which are capable of wrapping DNA to stabilize it, and prevent its denaturation under extreme environmental conditions.; DNA-binding protein HU HupB-like protein	2177409..2178098	Mycobacterium ulcerans Agy99	4551190
YP_905889.1	CDS	mutT1	NC_008611.1	2178160	2179098	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, hydrolytic enzyme. possibly involved in removal of damaged nucleotide.; hydrolase MutT1	complement(2178160..2179098)	Mycobacterium ulcerans Agy99	4551191
YP_905890.1	CDS	ppk	NC_008611.1	2179178	2181394	R	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase	complement(2179178..2181394)	Mycobacterium ulcerans Agy99	4551192
YP_905891.1	CDS	MUL_1973	NC_008611.1	2181473	2182126	R	membrane protein; hypothetical protein	complement(2181473..2182126)	Mycobacterium ulcerans Agy99	4551193
YP_905892.1	CDS	gpsA	NC_008611.1	2182318	2183325	D	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	2182318..2183325	Mycobacterium ulcerans Agy99	4551194
YP_905893.1	CDS	ddl	NC_008611.1	2183417	2184538	D	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A	2183417..2184538	Mycobacterium ulcerans Agy99	4551195
YP_905894.1	CDS	MUL_1977	NC_008611.1	2184535	2185119	R	membrane protein; hypothetical protein	complement(2184535..2185119)	Mycobacterium ulcerans Agy99	4551196
YP_905895.1	CDS	thiL	NC_008611.1	2185327	2186292	D	catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase	2185327..2186292	Mycobacterium ulcerans Agy99	4551197
YP_905896.1	CDS	MUL_1979	NC_008611.1	2186318	2186608	D	cytoplasmic protein; hypothetical protein	2186318..2186608	Mycobacterium ulcerans Agy99	4551198
YP_905897.1	CDS	ung	NC_008611.1	2186605	2187288	D	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase	2186605..2187288	Mycobacterium ulcerans Agy99	4551199
YP_905898.1	CDS	MUL_1982	NC_008611.1	2188503	2188925	D	cytoplasmic protein; function unknown; probably involved in cellular metabolism.; nitroreductase	2188503..2188925	Mycobacterium ulcerans Agy99	4551201
YP_905899.1	CDS	rpmB	NC_008611.1	2189081	2189275	R	required for 70S ribosome assembly; 50S ribosomal protein L28	complement(2189081..2189275)	Mycobacterium ulcerans Agy99	4551202
YP_905900.1	CDS	recG	NC_008611.1	2191253	2193484	D	catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG	2191253..2193484	Mycobacterium ulcerans Agy99	4551166
YP_905901.1	CDS	MUL_1987	NC_008611.1	2194207	2195055	R	Detected in the cytoplamic fraction by LC-MS/MS.; cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(2194207..2195055)	Mycobacterium ulcerans Agy99	4551168
YP_905902.1	CDS	MUL_1988	NC_008611.1	2195242	2195577	R	cytoplasmic protein; hypothetical protein	complement(2195242..2195577)	Mycobacterium ulcerans Agy99	4551169
YP_905903.1	CDS	lipN	NC_008611.1	2195623	2196741	D	cytoplasmic protein; function unknown, lipolytic enzyme involved in cellular metabolism.; lipase/esterase LipN	2195623..2196741	Mycobacterium ulcerans Agy99	4551170
YP_905904.1	CDS	MUL_1990	NC_008611.1	2196928	2197695	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	2196928..2197695	Mycobacterium ulcerans Agy99	4551171
YP_905905.1	CDS	MUL_1991	NC_008611.1	2197701	2198339	D	membrane protein; integral membrane protein	2197701..2198339	Mycobacterium ulcerans Agy99	4551172
YP_905906.1	CDS	pca	NC_008611.1	2198382	2201777	D	biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase	2198382..2201777	Mycobacterium ulcerans Agy99	4551173
YP_905907.1	CDS	coaD	NC_008611.1	2202402	2202875	D	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase	2202402..2202875	Mycobacterium ulcerans Agy99	4551175
YP_905908.1	CDS	MUL_1995	NC_008611.1	2202949	2203131	R	secreted protein; hypothetical protein	complement(2202949..2203131)	Mycobacterium ulcerans Agy99	4551176
YP_905909.1	CDS	MUL_1997	NC_008611.1	2204219	2205400	R	membrane protein; hypothetical protein	complement(2204219..2205400)	Mycobacterium ulcerans Agy99	4551178
YP_905910.1	CDS	MUL_1999	NC_008611.1	2207326	2208123	D	cytoplasmic protein; hypothetical protein	2207326..2208123	Mycobacterium ulcerans Agy99	4551180
YP_905911.1	CDS	MUL_2000	NC_008611.1	2208174	2209430	R	membrane protein; hypothetical protein	complement(2208174..2209430)	Mycobacterium ulcerans Agy99	4551181
YP_905912.1	CDS	fadD29	NC_008611.1	2211634	2213496	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	2211634..2213496	Mycobacterium ulcerans Agy99	4551183
YP_905913.1	CDS	MUL_2003	NC_008611.1	2213501	2214139	D	cytoplasmic protein; responsible for the direct conversion of chorismate to p-hydroxybenzoate, the substrate used in the production of glycosylated p-hydroxybenzoic acid methyl esters and structurally related phenolphthiocerol glycolipids. in M. tuberculosis, this is the sole enzymatic source of p- hydroxybenzoic acid.; chorismate pyruvate-lyase	2213501..2214139	Mycobacterium ulcerans Agy99	4551127
YP_905914.1	CDS	fadD22	NC_008611.1	2214258	2216366	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	2214258..2216366	Mycobacterium ulcerans Agy99	4551128
YP_905915.1	CDS	pks15/1	NC_008611.1	2216383	2222697	D	Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; polyketide synthase required for the elongation of p-HBAD derivatives to form p-hydroxybenzoate derivatives which are in turn converted to phenolphthiocerols by the ppsA-E locus. this is a key step in the production of phenolic glycolipids.; polyketide synthase	2216383..2222697	Mycobacterium ulcerans Agy99	4551129
YP_905916.1	CDS	lppX	NC_008611.1	2223112	2223801	D	Also detected in the membrane fraction by proteomics.; secreted protein; lipoprotein LppX	2223112..2223801	Mycobacterium ulcerans Agy99	4551130
YP_905917.1	CDS	mmpL7	NC_008611.1	2223841	2226591	R	secreted protein; involved in translocation of phthiocerol dimycocerosate (DIM) in the cell wall.; transmembrane transport protein MmpL7	complement(2223841..2226591)	Mycobacterium ulcerans Agy99	4551131
YP_905918.1	CDS	fadD28	NC_008611.1	2226593	2228335	R	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	complement(2226593..2228335)	Mycobacterium ulcerans Agy99	4551132
YP_905919.1	CDS	MUL_2009	NC_008611.1	2228774	2229550	D	cytoplasmic protein; function unknown but orthologue in M. tuberculosis H37Rv has been shown to catalyze the transfer of a methyl group onto the lipid moiety of phthiotriol dimycocerosates to form DIM.; methyltransferase	2228774..2229550	Mycobacterium ulcerans Agy99	4551133
YP_905920.1	CDS	mas	NC_008611.1	2230171	2236470	D	At least three isoforms were detected in the cytoplasmic extract. Also detected in the membrane fraction by proteomics.; membrane protein; catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids.; multifunctional mycocerosic acid synthase membrane-associated Mas	2230171..2236470	Mycobacterium ulcerans Agy99	4551134
YP_905921.1	CDS	papA5	NC_008611.1	2236674	2237918	R	required for PDIM synthesis; phthiocerol and phthiodiolone dimycocerosate esters are scaffolds used for virulence-enhancing lipids; proposed to catalyze diesterification of phthiocerol and phthiodolone with mycocerosate; functions in polyketide synthesis; acyltransferase PapA5	complement(2236674..2237918)	Mycobacterium ulcerans Agy99	4551135
YP_905922.1	CDS	drrC	NC_008611.1	2237952	2238782	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; probably involved in active transport of phthiocerol dimycocerosate (DIM) across the membrane (export) DrrA, DrrB and DrrC may act jointly to confer daunorubicin and doxorubicin resistance by an export mechanism. probably responsible for the translocation of the substrate across the membrane and localization of dim into the cell wall.; daunorubicin-DIM-transport integral membrane protein ABC transporter DrrC	complement(2237952..2238782)	Mycobacterium ulcerans Agy99	4551136
YP_905923.1	CDS	drrB	NC_008611.1	2238779	2239648	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; probably involved in active transport of phthiocerol dimycocerosate (DIM) across the membrane (export) DrrA, DrrB and DrrC may act jointly to confer daunorubicin and doxorubicin resistance by an export mechanism. probably responsible for the translocation of the substrate across the membrane and localization of DIM into the cell wall.; daunorubicin-DIM-transport integral membrane protein ABC transporter DrrB	complement(2238779..2239648)	Mycobacterium ulcerans Agy99	4551137
YP_905924.1	CDS	drrA	NC_008611.1	2239645	2240640	R	Detected in the membrane fraction by proteomics; membrane protein; probably involved in active transport of antibiotic and phthiocerol dimycocerosate (DIM) across the membrane (export) DrrA, DrrB and DrrC may act jointly to confer daunorubicin and doxorubicin resistance by an export mechanism. responsible for energy coupling to the transport system.; daunorubicin-DIM-transport ATP-binding protein ABC transporter DrrA	complement(2239645..2240640)	Mycobacterium ulcerans Agy99	4551138
YP_905925.1	CDS	ppsE	NC_008611.1	2240651	2245096	R	Three isoforms of the protein were detected in the cytoplasm by proteomics. Also detected in the membrane fraction by proteomics.; cytoplasmic protein; involved in phenolpthiocerol and phthiocerol dimycocerosate (DIM) biosynthesis: extension with Malony CoA (partial reduction, decarboxylation); phenolpthiocerol synthesis type-I polyketide synthase PpsE	complement(2240651..2245096)	Mycobacterium ulcerans Agy99	4551139
YP_905926.1	CDS	ppsD	NC_008611.1	2245102	2250522	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in phenolpthiocerol and phthiocerol dimycocerosate (DIM) biosynthesis: extension with methylmalony CoA (partial reduction); phenolpthiocerol synthesis type-I polyketide synthase PpsD	complement(2245102..2250522)	Mycobacterium ulcerans Agy99	4551140
YP_905927.1	CDS	ppsC	NC_008611.1	2250522	2257127	R	Detected in the cytoplasmic fraction by proteomics.; cytoplasmic protein; involved in phenolpthiocerol and phthiocerol dimycocerosate (DIM) biosynthesis: extension with Malony CoA (complete reduction); phenolpthiocerol synthesis type-I polyketide synthase PpsC	complement(2250522..2257127)	Mycobacterium ulcerans Agy99	4551141
YP_905928.1	CDS	ppsB	NC_008611.1	2257127	2261671	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; involved in phenolpthiocerol and phthiocerol dimycocerosate (DIM) biosynthesis: extension with Malony CoA (partial reduction); phenolpthiocerol synthesis type-I polyketide synthase PpsB	complement(2257127..2261671)	Mycobacterium ulcerans Agy99	4551142
YP_905929.1	CDS	ppsA	NC_008611.1	2261701	2266509	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; involved in phenolpthiocerol and phthiocerol dimycocerosate (DIM) biosynthesis: extension of C18 with Malony CoA (partial reduction); phenolpthiocerol synthesis type-I polyketide synthase PpsA	complement(2261701..2266509)	Mycobacterium ulcerans Agy99	4551143
YP_905930.1	CDS	fadD26	NC_008611.1	2266506	2268260	R	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	complement(2266506..2268260)	Mycobacterium ulcerans Agy99	4551144
YP_905931.1	CDS	MUL_2023	NC_008611.1	2268911	2269228	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(2268911..2269228)	Mycobacterium ulcerans Agy99	4551074
YP_905932.1	CDS	MUL_2024	NC_008611.1	2269253	2269957	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(2269253..2269957)	Mycobacterium ulcerans Agy99	4551075
YP_905933.1	CDS	tesA	NC_008611.1	2270352	2271101	R	cytoplasmic protein; function unknown however in M. tuberculosis H37Rv TesA interacts with the PpsE protein. PpsE is part of the phenolphthiocerol synthase PKS cluster.; thioesterase TesA	complement(2270352..2271101)	Mycobacterium ulcerans Agy99	4551076
YP_905934.1	CDS	MUL_2026	NC_008611.1	2271191	2271508	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(2271191..2271508)	Mycobacterium ulcerans Agy99	4551077
YP_905935.1	CDS	MUL_2027	NC_008611.1	2271533	2272237	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(2271533..2272237)	Mycobacterium ulcerans Agy99	4551078
YP_905936.1	CDS	MUL_2028	NC_008611.1	2272726	2273469	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, possibly involved in cell division and chromosome partitioning.; hypothetical protein	2272726..2273469	Mycobacterium ulcerans Agy99	4551079
YP_905937.1	CDS	MUL_2029	NC_008611.1	2273544	2274137	D	cytoplasmic protein; hypothetical protein	2273544..2274137	Mycobacterium ulcerans Agy99	4551080
YP_905938.1	CDS	rnc	NC_008611.1	2274134	2274865	D	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III	2274134..2274865	Mycobacterium ulcerans Agy99	4551081
YP_905939.1	CDS	fpg	NC_008611.1	2274866	2275744	D	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase	2274866..2275744	Mycobacterium ulcerans Agy99	4551082
YP_905940.1	CDS	MUL_2032	NC_008611.1	2275836	2276528	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown.  contains N-term OsmC-like protein domain and C-term AcyP, acylphosphatases domain.; hypothetical protein	2275836..2276528	Mycobacterium ulcerans Agy99	4551083
YP_905941.1	CDS	smc	NC_008611.1	2276627	2280229	D	membrane protein; plays an important role in chromosome structure and partitioning. essential for chromosome partition.; chromosome partition protein Smc	2276627..2280229	Mycobacterium ulcerans Agy99	4551084
YP_905942.1	CDS	ftsY	NC_008611.1	2280289	2281656	D	membrane protein; probably involved in the reception and insertion of a subset of proteins at the membrane: possibly membrane receptor for Ffh.; cell division protein FtsY	2280289..2281656	Mycobacterium ulcerans Agy99	4551085
YP_905943.1	CDS	glnB	NC_008611.1	2283229	2283567	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; in nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P-II is uridylylated to P-II-UMP by GlnD. P-II-UMP allows the deadenylylation of glutamine synthetase (gs), thus activating the enzyme. converserly, in nitrogen excess P-II is deuridylated and promotes the adenylation of gs. P-II indirectly controls the transcription of the gs gene. P-II prevents NR-II catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of GlnA. when P-II is uridylylated to P-II-UMP, these events are reversed.; nitrogen regulatory protein P-II GlnB	2283229..2283567	Mycobacterium ulcerans Agy99	4551087
YP_905944.1	CDS	MUL_2038	NC_008611.1	2286125	2287861	R	cytoplasmic protein; hypothetical protein	complement(2286125..2287861)	Mycobacterium ulcerans Agy99	4551089
YP_905945.1	CDS	MUL_2039	NC_008611.1	2288077	2288292	R	cytoplasmic protein; hypothetical protein	complement(2288077..2288292)	Mycobacterium ulcerans Agy99	4551090
YP_905946.1	CDS	ffh	NC_008611.1	2288431	2290002	D	Also detected in the cytoplasmic fraction by 2D-LC- MS/MS; cytoplasmic protein; necessary for efficient export of extra-cytoplasmic proteins. binds to the signal sequence when it emerges from the ribosomes.; signal recognition particle protein Ffh	2288431..2290002	Mycobacterium ulcerans Agy99	4551091
YP_905947.1	CDS	MUL_2041	NC_008611.1	2290009	2291100	D	cytoplasmic protein; hypothetical protein	2290009..2291100	Mycobacterium ulcerans Agy99	4551055
YP_905948.1	CDS	pknI	NC_008611.1	2291149	2292954	D	membrane protein; involved in signal transduction (via phosphorylation) thought to be involved in cell division/differentiation [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; Ser/Thr protein kinase	2291149..2292954	Mycobacterium ulcerans Agy99	4551056
YP_905949.1	CDS	MUL_2043	NC_008611.1	2293060	2294853	D	cytoplasmic protein; hydrolizes a specific D-amino acid.; D-amino acid aminohydrolase	2293060..2294853	Mycobacterium ulcerans Agy99	4551057
YP_905950.1	CDS	MUL_2044	NC_008611.1	2294855	2295457	D	cytoplasmic protein; thought to be involved in transcriptional mechanism.; TetR family transcriptional regulator	2294855..2295457	Mycobacterium ulcerans Agy99	4551058
YP_905951.1	CDS	dacB	NC_008611.1	2295477	2296349	R	secreted protein; involved in peptidoglycan synthesis (at final stages) hydrolyzes the bound D-alanyl-D-alanine [catalytic activity: D-alanyl-D-alanine + H(2)O = 2 D- alanine]; D-alanyl-D-alanine carboxypeptidase	complement(2295477..2296349)	Mycobacterium ulcerans Agy99	4551059
YP_905952.1	CDS	MUL_2046	NC_008611.1	2296406	2296840	D	cytoplasmic protein; hypothetical protein	2296406..2296840	Mycobacterium ulcerans Agy99	4551060
YP_905953.1	CDS	rpsP	NC_008611.1	2297046	2297531	D	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16	2297046..2297531	Mycobacterium ulcerans Agy99	4551061
YP_905954.1	CDS	MUL_2048	NC_008611.1	2297540	2297782	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	2297540..2297782	Mycobacterium ulcerans Agy99	4551062
YP_905955.1	CDS	rimM	NC_008611.1	2297807	2298331	D	Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM	2297807..2298331	Mycobacterium ulcerans Agy99	4551063
YP_905956.1	CDS	trmD	NC_008611.1	2298340	2299032	D	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase	2298340..2299032	Mycobacterium ulcerans Agy99	4551064
YP_905957.1	CDS	lppW	NC_008611.1	2299144	2300103	R	secreted protein; alanine rich lipoprotein LppW	complement(2299144..2300103)	Mycobacterium ulcerans Agy99	4551065
YP_905958.1	CDS	rplS	NC_008611.1	2300461	2300802	D	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19	2300461..2300802	Mycobacterium ulcerans Agy99	4551066
YP_905959.1	CDS	lepB	NC_008611.1	2300914	2301777	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; cleavage of N-terminal leader sequences from secreted protein precursors.; signal peptidase I LepB	2300914..2301777	Mycobacterium ulcerans Agy99	4551067
YP_905960.1	CDS	rnhB	NC_008611.1	2301780	2302499	D	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII	2301780..2302499	Mycobacterium ulcerans Agy99	4551068
YP_905961.1	CDS	MUL_2055	NC_008611.1	2302619	2302924	D	cytoplasmic protein; hypothetical protein	2302619..2302924	Mycobacterium ulcerans Agy99	4551069
YP_905962.1	CDS	MUL_2057	NC_008611.1	2303798	2305156	R	cytoplasmic protein; hypothetical protein	complement(2303798..2305156)	Mycobacterium ulcerans Agy99	4551071
YP_905963.1	CDS	MUL_2058	NC_008611.1	2305274	2306254	D	membrane protein; function unknown, possibly involved in galactose metabolism.; hypothetical protein	2305274..2306254	Mycobacterium ulcerans Agy99	4551072
YP_905964.1	CDS	fdhD	NC_008611.1	2306389	2307210	D	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein	2306389..2307210	Mycobacterium ulcerans Agy99	4551073
YP_905965.1	CDS	MUL_2060	NC_008611.1	2307327	2307695	D	cytoplasmic protein; hypothetical protein	2307327..2307695	Mycobacterium ulcerans Agy99	4551019
YP_905966.1	CDS	MUL_2062	NC_008611.1	2309203	2310378	D	membrane protein; hypothetical protein	2309203..2310378	Mycobacterium ulcerans Agy99	4551021
YP_905967.1	CDS	viuB	NC_008611.1	2310411	2311259	D	Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; thought to be involved in intracellular removal of iron from iron-mycobactin complex. mycobactin is an iron- chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm.; mycobactin utilization protein ViuB	2310411..2311259	Mycobacterium ulcerans Agy99	4551022
YP_905968.1	CDS	xerC	NC_008611.1	2312473	2313381	D	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC	2312473..2313381	Mycobacterium ulcerans Agy99	4551024
YP_905969.1	CDS	rpsB	NC_008611.1	2314218	2315033	D	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2	2314218..2315033	Mycobacterium ulcerans Agy99	4551026
YP_905970.1	CDS	tsf	NC_008611.1	2315035	2315850	D	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts	2315035..2315850	Mycobacterium ulcerans Agy99	4551027
YP_905971.1	CDS	amiC	NC_008611.1	2315871	2317289	D	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase	2315871..2317289	Mycobacterium ulcerans Agy99	4551028
YP_905972.1	CDS	MUL_2070	NC_008611.1	2317305	2317733	R	membrane protein; involved in transcriptional mechanism.; transcriptional regulatory protein	complement(2317305..2317733)	Mycobacterium ulcerans Agy99	4551029
YP_905973.1	CDS	MUL_2071	NC_008611.1	2318013	2318417	D	membrane protein; hypothetical protein	2318013..2318417	Mycobacterium ulcerans Agy99	4551030
YP_905974.1	CDS	MUL_2072	NC_008611.1	2318705	2319565	D	membrane protein; hypothetical protein	2318705..2319565	Mycobacterium ulcerans Agy99	4551031
YP_905975.1	CDS	MUL_2073	NC_008611.1	2319566	2320306	R	cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein	complement(2319566..2320306)	Mycobacterium ulcerans Agy99	4551032
YP_905976.1	CDS	pyrH	NC_008611.1	2320486	2321556	D	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; uridine monophosphate kinase [catalytic activity: ATP + ump = ADP + UDP]; uridylate kinase PyrH	2320486..2321556	Mycobacterium ulcerans Agy99	4551033
YP_905977.1	CDS	frr	NC_008611.1	2321621	2322178	D	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor	2321621..2322178	Mycobacterium ulcerans Agy99	4551034
YP_905978.1	CDS	cdsA	NC_008611.1	2322211	2323125	D	membrane protein; involved in the phospholipid biosynthesis [catalytic activity: CTP + phosphatidate = pyrophosphate + CDP-diacylglycerol]; integral membrane phosphatidate cytidylyltransferase CdsA	2322211..2323125	Mycobacterium ulcerans Agy99	4551035
YP_905979.1	CDS	MUL_2078	NC_008611.1	2324231	2325325	D	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N	2324231..2325325	Mycobacterium ulcerans Agy99	4551001
YP_905980.1	CDS	mpt53	NC_008611.1	2325505	2325978	D	secreted protein; not really known. despite a weak homology to thioredoxin this cannot serve as a substrate for thioredoxin reductase. furthermore it has no disulfide reducing activity.; soluble secreted antigen Mpt53 precursor	2325505..2325978	Mycobacterium ulcerans Agy99	4551002
YP_905981.1	CDS	MUL_2080	NC_008611.1	2325992	2326864	D	membrane protein; function unknown, possibly involved in transport of mercury across the membrane.; integral membrane protein	2325992..2326864	Mycobacterium ulcerans Agy99	4551003
YP_905982.1	CDS	MUL_2081	NC_008611.1	2326880	2327302	D	cytoplasmic protein; hypothetical protein	2326880..2327302	Mycobacterium ulcerans Agy99	4551004
YP_905983.1	CDS	MUL_2083	NC_008611.1	2327800	2328846	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2327800..2328846	Mycobacterium ulcerans Agy99	4551006
YP_905984.1	CDS	dipZ	NC_008611.1	2329370	2331121	R	membrane protein; may be involved in cytochrome-C biogenesis.; integral membrane C-type cytochrome biogenesis protein DipZ	complement(2329370..2331121)	Mycobacterium ulcerans Agy99	4551007
YP_905985.1	CDS	dxr	NC_008611.1	2331209	2332417	D	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase	2331209..2332417	Mycobacterium ulcerans Agy99	4551008
YP_905986.1	CDS	MUL_2086	NC_008611.1	2332437	2333651	D	membrane protein; transmembrane protein	2332437..2333651	Mycobacterium ulcerans Agy99	4551009
YP_905987.1	CDS	ispG	NC_008611.1	2333746	2334837	D	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	2333746..2334837	Mycobacterium ulcerans Agy99	4551010
YP_905988.1	CDS	MUL_2088	NC_008611.1	2334889	2335743	D	cytoplasmic protein; hypothetical protein	2334889..2335743	Mycobacterium ulcerans Agy99	4551011
YP_905989.1	CDS	MUL_2089	NC_008611.1	2335854	2337668	D	secreted protein; function unknown, possibly involved in cell wall biosynthesis.; penicillin-binding lipoprotein	2335854..2337668	Mycobacterium ulcerans Agy99	4551012
YP_905990.1	CDS	MUL_2090	NC_008611.1	2337780	2338364	D	cytoplasmic protein; hypothetical protein	2337780..2338364	Mycobacterium ulcerans Agy99	4551013
YP_905991.1	CDS	mapB	NC_008611.1	2338511	2339326	D	cytoplasmic protein; removes the amino-terminal methionine from nascent proteins [catalytic activity: L-methionylpeptide + H(2)O = L-methionine + peptide]; methionine aminopeptidase MapB	2338511..2339326	Mycobacterium ulcerans Agy99	4551014
YP_905992.1	CDS	MUL_2092	NC_008611.1	2339533	2340084	D	membrane protein; hypothetical protein	2339533..2340084	Mycobacterium ulcerans Agy99	4551015
YP_905993.1	CDS	MUL_2093	NC_008611.1	2340217	2340954	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; amidotransferase	2340217..2340954	Mycobacterium ulcerans Agy99	4551016
YP_905994.1	CDS	MUL_2094	NC_008611.1	2341023	2341991	R	membrane protein; PPE family protein	complement(2341023..2341991)	Mycobacterium ulcerans Agy99	4551017
YP_905995.1	CDS	MUL_2095	NC_008611.1	2342273	2342821	R	membrane protein; hypothetical protein	complement(2342273..2342821)	Mycobacterium ulcerans Agy99	4551018
YP_905996.1	CDS	MUL_2096	NC_008611.1	2342876	2344042	R	membrane protein; PPE family protein	complement(2342876..2344042)	Mycobacterium ulcerans Agy99	4550982
YP_905997.1	CDS	MUL_2097	NC_008611.1	2344282	2344713	R	membrane protein; hypothetical protein	complement(2344282..2344713)	Mycobacterium ulcerans Agy99	4550983
YP_905998.1	CDS	MUL_2101	NC_008611.1	2348906	2349340	D	cytoplasmic protein; hypothetical protein	2348906..2349340	Mycobacterium ulcerans Agy99	4550987
YP_905999.1	CDS	MUL_2106	NC_008611.1	2352209	2352322	D	hypothetical protein	2352209..2352322	Mycobacterium ulcerans Agy99	4550990
YP_906000.1	CDS	MUL_2108	NC_008611.1	2353829	2354851	R	cytoplasmic protein; hypothetical protein	complement(2353829..2354851)	Mycobacterium ulcerans Agy99	4550992
YP_906001.2	CDS	mqo	NC_008611.1	2355048	2356709	D	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase	2355048..2356709	Mycobacterium ulcerans Agy99	4550993
YP_906002.1	CDS	elaA	NC_008611.1	2356586	2356996	D	cytoplasmic protein; function unknown, predicted acyltransferase activity; acyltransferase ElaA	2356586..2356996	Mycobacterium ulcerans Agy99	4550994
YP_906003.1	CDS	MUL_2111	NC_008611.1	2356993	2358843	D	cytoplasmic protein; function unknown, possibly introduces a magnesium ion into specific substrate/compound.; magnesium chelatase	2356993..2358843	Mycobacterium ulcerans Agy99	4550995
YP_906004.1	CDS	cobO	NC_008611.1	2358865	2359479	D	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase	2358865..2359479	Mycobacterium ulcerans Agy99	4550996
YP_906005.1	CDS	cobB	NC_008611.1	2359574	2360950	D	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase	2359574..2360950	Mycobacterium ulcerans Agy99	4550997
YP_906006.1	CDS	cysG	NC_008611.1	2361128	2362333	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in the biosynthesis of siroheme and cobalamin [catalytic activity: 2 S-adenosyl-L-methionine + uroporphyrin III = 2 S-adenosyl-L-homocysteine + sirohydrochlorin] SAM-dependent methyl transferase that methylates uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 and then position C-12 or C-18 to form trimethylpyrrocorphin 2. it catalyzes also the conversion of precorrin-2 into siroheme (consisting of an oxidation and fe(2+) chelation); multifunctional enzyme siroheme synthase CysG	2361128..2362333	Mycobacterium ulcerans Agy99	4550998
YP_906007.1	CDS	efpA	NC_008611.1	2362367	2363959	D	membrane protein; thought to be involved in transport of undeterminated substrate (possibly drug) across the membrane (export): so responsible for the translocation of the substrate across the membrane.; integral membrane efflux protein EfpA	2362367..2363959	Mycobacterium ulcerans Agy99	4550999
YP_906008.1	CDS	proS	NC_008611.1	2364066	2365814	D	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase	2364066..2365814	Mycobacterium ulcerans Agy99	4551000
YP_906009.1	CDS	MUL_2117	NC_008611.1	2365827	2366315	R	cytoplasmic protein; hypothetical protein	complement(2365827..2366315)	Mycobacterium ulcerans Agy99	4550945
YP_906010.1	CDS	MUL_2118	NC_008611.1	2366312	2366818	R	membrane protein; hypothetical protein	complement(2366312..2366818)	Mycobacterium ulcerans Agy99	4550946
YP_906011.1	CDS	MUL_2119	NC_008611.1	2367070	2367603	D	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein	2367070..2367603	Mycobacterium ulcerans Agy99	4550947
YP_906012.1	CDS	nusA	NC_008611.1	2367600	2368643	D	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA	2367600..2368643	Mycobacterium ulcerans Agy99	4550948
YP_906013.1	CDS	MUL_2121	NC_008611.1	2368822	2369109	D	cytoplasmic protein; hypothetical protein	2368822..2369109	Mycobacterium ulcerans Agy99	4550949
YP_906014.1	CDS	infB	NC_008611.1	2369174	2372011	D	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2	2369174..2372011	Mycobacterium ulcerans Agy99	4550950
YP_906015.1	CDS	rbfA	NC_008611.1	2372024	2372551	D	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A	2372024..2372551	Mycobacterium ulcerans Agy99	4550951
YP_906016.1	CDS	MUL_2124	NC_008611.1	2372571	2373530	D	cytoplasmic protein; hypothetical protein	2372571..2373530	Mycobacterium ulcerans Agy99	4550952
YP_906017.1	CDS	dinF	NC_008611.1	2373546	2374883	D	membrane protein; function unknown, induction by DNA damage.; DNA-damage-inducible protein F DinF	2373546..2374883	Mycobacterium ulcerans Agy99	4550953
YP_906018.1	CDS	ugpA	NC_008611.1	2374948	2375847	D	membrane protein; involved in active transport of SN-glycerol-3- phosphate across the membrane (import) responsible for the translocation of the substrate across the membrane.; SN-glycerol-3-phosphate transport integral membrane protein ABC transporter UgpA	2374948..2375847	Mycobacterium ulcerans Agy99	4550954
YP_906019.1	CDS	MUL_2128	NC_008611.1	2376320	2377366	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2376320..2377366)	Mycobacterium ulcerans Agy99	4550956
YP_906020.1	CDS	MUL_2129	NC_008611.1	2377843	2379018	D	membrane protein; PPE family protein	2377843..2379018	Mycobacterium ulcerans Agy99	4550957
YP_906021.1	CDS	MUL_2133	NC_008611.1	2382612	2382932	R	cytoplasmic protein; hypothetical protein	complement(2382612..2382932)	Mycobacterium ulcerans Agy99	4550961
YP_906022.1	CDS	MUL_2134	NC_008611.1	2383259	2384971	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hydrolase	complement(2383259..2384971)	Mycobacterium ulcerans Agy99	4550962
YP_906023.1	CDS	MUL_2135	NC_008611.1	2385003	2385578	R	secreted protein; hypothetical protein	complement(2385003..2385578)	Mycobacterium ulcerans Agy99	4550963
YP_906024.1	CDS	MUL_2136	NC_008611.1	2385773	2386084	D	cytoplasmic protein; hypothetical protein	2385773..2386084	Mycobacterium ulcerans Agy99	4550927
YP_906025.1	CDS	lppV_1	NC_008611.1	2387760	2388335	D	secreted protein; lipoprotein LppV	2387760..2388335	Mycobacterium ulcerans Agy99	4550929
YP_906026.1	CDS	lppV	NC_008611.1	2388393	2388965	D	secreted protein; lipoprotein LppV	2388393..2388965	Mycobacterium ulcerans Agy99	4550930
YP_906027.1	CDS	MUL_2140	NC_008611.1	2389095	2390021	D	cytoplasmic protein; hypothetical protein	2389095..2390021	Mycobacterium ulcerans Agy99	4550931
YP_906028.1	CDS	pptII	NC_008611.1	2390018	2390701	D	cytoplasmic protein; phosphopantetheinyl transferase. secondary metabolites biosynthesis, transport, and catabolism. Sfp- type phosphopantetheinyl transferase; phosphopantetheinyl transferase, PptII	2390018..2390701	Mycobacterium ulcerans Agy99	4550932
YP_906029.1	CDS	truB	NC_008611.1	2390698	2391603	D	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B	2390698..2391603	Mycobacterium ulcerans Agy99	4550933
YP_906030.1	CDS	ltp1	NC_008611.1	2391710	2392912	D	membrane protein; possibly catalyzes the transfer of a great variety of lipids between membranes.; lipid-transfer protein	2391710..2392912	Mycobacterium ulcerans Agy99	4550934
YP_906031.1	CDS	fadE21	NC_008611.1	2392941	2394179	D	membrane protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE21	2392941..2394179	Mycobacterium ulcerans Agy99	4550935
YP_906032.1	CDS	sirR	NC_008611.1	2394196	2394888	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional repressor SirR	complement(2394196..2394888)	Mycobacterium ulcerans Agy99	4550936
YP_906033.1	CDS	ribF	NC_008611.1	2395069	2396043	D	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase	2395069..2396043	Mycobacterium ulcerans Agy99	4550937
YP_906034.1	CDS	rpsO	NC_008611.1	2396170	2396439	D	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15	2396170..2396439	Mycobacterium ulcerans Agy99	4550938
YP_906035.1	CDS	lppU	NC_008611.1	2396451	2396984	D	secreted protein; lipoprotein LppU	2396451..2396984	Mycobacterium ulcerans Agy99	4550939
YP_906036.1	CDS	MUL_2149	NC_008611.1	2397019	2397417	D	cytoplasmic protein; hypothetical protein	2397019..2397417	Mycobacterium ulcerans Agy99	4550940
YP_906037.1	CDS	gpsI	NC_008611.1	2397815	2400076	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS) Also detected in the cytoplamic fraction by LC- MS/MS and in the extracellular matrix fraction by proteomics.; cytoplasmic protein; involved in mRNA degradation. hydrolyses single- stranded polyribonucleotides processively in the 3' to 5' direction. involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [catalytic activity: RNA(n+1) + phosphate = RNA(N) + a nucleoside diphosphate]; polynucleotide phosphorylase/polyadenylase	2397815..2400076	Mycobacterium ulcerans Agy99	4550941
YP_906038.1	CDS	MUL_2152	NC_008611.1	2401151	2402197	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2401151..2402197)	Mycobacterium ulcerans Agy99	4550943
YP_906039.1	CDS	MUL_2153	NC_008611.1	2402751	2403785	D	secreted protein; hypothetical protein	2402751..2403785	Mycobacterium ulcerans Agy99	4550944
YP_906040.1	CDS	ald	NC_008611.1	2403862	2404977	R	Also detected in the cytoplasmic and membrane fractions by proteomics.; secreted protein; may play a role in cell wall synthesis as L-alanine is an important constituent of the peptidoglycan layer [catalytic activity: L-alanine + H(2)O + NAD(+) = pyruvate + NH(3) + NADH]; secreted L-alanine dehydrogenase Ald (40 kDa antigen)	complement(2403862..2404977)	Mycobacterium ulcerans Agy99	4550816
YP_906041.1	CDS	MUL_2155	NC_008611.1	2405173	2405607	D	cytoplasmic protein; involved in transcriptional mechanism.; Lrp/AsnC family transcriptional regulator	2405173..2405607	Mycobacterium ulcerans Agy99	4550817
YP_906042.1	CDS	MUL_2156	NC_008611.1	2405636	2406100	D	Also detected in the membrane fraction by proteomics.; cytoplasmic protein; hypothetical protein	2405636..2406100	Mycobacterium ulcerans Agy99	4550818
YP_906043.1	CDS	MUL_2157	NC_008611.1	2406205	2407122	D	cytoplasmic protein; hypothetical protein	2406205..2407122	Mycobacterium ulcerans Agy99	4550819
YP_906044.1	CDS	MUL_2159	NC_008611.1	2408901	2409983	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	2408901..2409983	Mycobacterium ulcerans Agy99	4550821
YP_906045.1	CDS	MUL_2160	NC_008611.1	2409989	2410630	R	cytoplasmic protein; hypothetical protein	complement(2409989..2410630)	Mycobacterium ulcerans Agy99	4550822
YP_906046.1	CDS	MUL_2161	NC_008611.1	2410751	2411776	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	2410751..2411776	Mycobacterium ulcerans Agy99	4550823
YP_906047.1	CDS	MUL_2162	NC_008611.1	2411847	2412872	D	cytoplasmic protein; hypothetical protein	2411847..2412872	Mycobacterium ulcerans Agy99	4550824
YP_906048.1	CDS	dapB	NC_008611.1	2414320	2415057	D	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase	2414320..2415057	Mycobacterium ulcerans Agy99	4550826
YP_906049.1	CDS	MUL_2165	NC_008611.1	2415065	2415529	D	secreted protein; hypothetical protein	2415065..2415529	Mycobacterium ulcerans Agy99	4550827
YP_906050.1	CDS	MUL_2166	NC_008611.1	2415526	2415990	D	cytoplasmic protein; hypothetical protein	2415526..2415990	Mycobacterium ulcerans Agy99	4550828
YP_906051.1	CDS	MUL_2167	NC_008611.1	2416526	2417647	D	PPE44; membrane protein; function unknown. may be involved in virulence; PPE family protein	2416526..2417647	Mycobacterium ulcerans Agy99	4550830
YP_906052.1	CDS	MUL_2170	NC_008611.1	2420473	2421519	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2420473..2421519)	Mycobacterium ulcerans Agy99	4550833
YP_906053.1	CDS	fabG	NC_008611.1	2425638	2426420	D	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	2425638..2426420	Mycobacterium ulcerans Agy99	4550642
YP_906054.1	CDS	MUL_2175	NC_008611.1	2426816	2427862	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2426816..2427862)	Mycobacterium ulcerans Agy99	4550644
YP_906055.1	CDS	fadE18_1	NC_008611.1	2428983	2430086	D	cytoplasmic protein; function unknown, but supposed involvement in lipid degradation.; acyl-CoA dehydrogenase FadE18	2428983..2430086	Mycobacterium ulcerans Agy99	4550645
YP_906056.1	CDS	MUL_2177	NC_008611.1	2430109	2430849	R	Detected in the secreted fraction by proteomics.; secreted protein; function unknown, probably involved in cellular metabolism.; alanine rich hydrolase	complement(2430109..2430849)	Mycobacterium ulcerans Agy99	4550646
YP_906057.1	CDS	thyA	NC_008611.1	2430948	2431748	D	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase	2430948..2431748	Mycobacterium ulcerans Agy99	4550647
YP_906058.1	CDS	dfrA	NC_008611.1	2431756	2432253	D	cytoplasmic protein; essential step for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dump to dTMP [catalytic activity: 5,6,7,8- tetrahydrofolate + NADP(+) = 7,8-dihydrofolate + NADPH]; dihydrofolate reductase DfrA	2431756..2432253	Mycobacterium ulcerans Agy99	4550648
YP_906059.1	CDS	MUL_2180	NC_008611.1	2432250	2433464	D	cytoplasmic protein; hypothetical protein	2432250..2433464	Mycobacterium ulcerans Agy99	4550649
YP_906060.1	CDS	thyX	NC_008611.1	2436003	2436764	D	flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase	2436003..2436764	Mycobacterium ulcerans Agy99	4550652
YP_906061.1	CDS	dapA	NC_008611.1	2436882	2437784	D	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase	2436882..2437784	Mycobacterium ulcerans Agy99	4550653
YP_906062.1	CDS	MUL_2185	NC_008611.1	2437850	2438167	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(2437850..2438167)	Mycobacterium ulcerans Agy99	4550654
YP_906063.1	CDS	MUL_2186	NC_008611.1	2438192	2438896	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(2438192..2438896)	Mycobacterium ulcerans Agy99	4550655
YP_906064.1	CDS	MUL_2188	NC_008611.1	2440037	2440486	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(2440037..2440486)	Mycobacterium ulcerans Agy99	4550623
YP_906065.1	CDS	furA	NC_008611.1	2440852	2441268	D	cytoplasmic protein; acts as a global negative controlling element, employing fe(2+) as a cofactor to bind the operator of the repressed genes. seems to regulate transcription of KatG gene.; ferric uptake regulation protein FurA	2440852..2441268	Mycobacterium ulcerans Agy99	4550624
YP_906066.1	CDS	katG	NC_008611.1	2441410	2443536	D	Also detected in the secreted protein fraction by 2D-LC-MS/MS.; cytoplasmic protein; multifunctional enzyme, exhibiting both a catalase, a broad-spectrum peroxidase, and a peroxynitritase activities. may play a role in the intracellular survival of mycobacteria within macrophages; protection against reactive oxygen and nitrogen intermediates produced by phagocytic cells. seems regulated by SigB [catalytic activity: 2 H(2)O(2) = O(2) + 2 H(2)O]; catalase-peroxidase-peroxynitritase T KatG	2441410..2443536	Mycobacterium ulcerans Agy99	4550625
YP_906067.1	CDS	betP	NC_008611.1	2443443	2445380	R	membrane protein; high-affinity uptake of glycine betaine. supposed responsible for the translocation of the substrate across the membrane.; glycine betaine transport integral membrane protein BetP	complement(2443443..2445380)	Mycobacterium ulcerans Agy99	4550626
YP_906068.1	CDS	MUL_2192	NC_008611.1	2445727	2446773	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2445727..2446773)	Mycobacterium ulcerans Agy99	4550627
YP_906069.1	CDS	MUL_2196	NC_008611.1	2449447	2450493	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2449447..2450493	Mycobacterium ulcerans Agy99	4550630
YP_906070.1	CDS	MUL_2197	NC_008611.1	2453245	2453793	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(2453245..2453793)	Mycobacterium ulcerans Agy99	4550631
YP_906071.1	CDS	MUL_2198	NC_008611.1	2453903	2454532	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism; nitroreductase	complement(2453903..2454532)	Mycobacterium ulcerans Agy99	4550632
YP_906072.1	CDS	MUL_2200	NC_008611.1	2455743	2457707	D	membrane protein; involved in signal transduction (via phosphorylation) thought to be involved in membrane transport. phosphorylates the peptide substrate myelin basic protein (MBP) at serine and threonine residues [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; membrane-anchored serine/threonine-protein kinase	2455743..2457707	Mycobacterium ulcerans Agy99	4550634
YP_906073.1	CDS	MUL_2201	NC_008611.1	2457915	2458244	R	cytoplasmic protein; function unknown.; hypothetical protein	complement(2457915..2458244)	Mycobacterium ulcerans Agy99	4550635
YP_906074.1	CDS	MUL_2202	NC_008611.1	2458333	2458905	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; hypothetical protein	2458333..2458905	Mycobacterium ulcerans Agy99	4550636
YP_906075.1	CDS	MUL_2205	NC_008611.1	2462531	2463001	R	Also detected in the extracellular matrix and membrane fraction by proteomics.; cytoplasmic protein; hypothetical protein	complement(2462531..2463001)	Mycobacterium ulcerans Agy99	4550639
YP_906076.1	CDS	MUL_2208	NC_008611.1	2469261	2469818	R	secreted protein; function unknown.  secreted protein.; hypothetical protein	complement(2469261..2469818)	Mycobacterium ulcerans Agy99	4550608
YP_906077.1	CDS	MUL_2209	NC_008611.1	2470412	2471383	D	cytoplasmic protein; thought to be involved in fatty acid degradation. FadB and FadA are the alpha and BetA subunits of the multifunctional enzyme complex of the fatty acid degradation cycle.; oxidoreductase	2470412..2471383	Mycobacterium ulcerans Agy99	4550609
YP_906078.1	CDS	MUL_2210	NC_008611.1	2471577	2472005	D	membrane protein; function unknown, unknown, contains a C-term cellobiohydrolase a (1,4-beta-cellobiosidase a) domain and a N-term cellulose-binding domain (CBD) domain. the CBD is found either at the N-term or at the C-term of endoglucanases, cellobiohydrolases (exoglucanases), or xylanases; chitinase/cellulase	2471577..2472005	Mycobacterium ulcerans Agy99	4550610
YP_906079.1	CDS	MUL_2213	NC_008611.1	2474337	2474669	R	cytoplasmic protein; could be involved in the catabolism of catechol to succinate- and acetyl-CoA in the beta-ketoadipate pathway (at the third step) [catalytic activity: 2,5-dihydro-5- oxofuran-2-acetate = 3,4-dihydro-5-oxofuran-2-acetate]; muconolactone isomerase	complement(2474337..2474669)	Mycobacterium ulcerans Agy99	4550613
YP_906080.1	CDS	lpd	NC_008611.1	2474844	2476238	D	E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component; dihydrolipoamide dehydrogenase	2474844..2476238	Mycobacterium ulcerans Agy99	4550614
YP_906081.1	CDS	MUL_2215	NC_008611.1	2476241	2476516	D	membrane protein; hypothetical protein	2476241..2476516	Mycobacterium ulcerans Agy99	4550615
YP_906082.1	CDS	MUL_2216	NC_008611.1	2476522	2476716	R	cytoplasmic protein; hypothetical protein	complement(2476522..2476716)	Mycobacterium ulcerans Agy99	4550616
YP_906083.1	CDS	MUL_2217	NC_008611.1	2476797	2477843	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2476797..2477843)	Mycobacterium ulcerans Agy99	4550617
YP_906084.1	CDS	MUL_2219	NC_008611.1	2478359	2479693	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	2478359..2479693	Mycobacterium ulcerans Agy99	4550619
YP_906085.1	CDS	MUL_2220	NC_008611.1	2480160	2480987	R	secreted protein; function unknown.  possible secreted protein.; hypothetical protein	complement(2480160..2480987)	Mycobacterium ulcerans Agy99	4550620
YP_906086.1	CDS	MUL_2223	NC_008611.1	2482652	2483941	D	cytoplasmic protein; hypothetical protein	2482652..2483941	Mycobacterium ulcerans Agy99	4550589
YP_906087.1	CDS	MUL_2228	NC_008611.1	2486508	2486741	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	2486508..2486741	Mycobacterium ulcerans Agy99	4550592
YP_906088.1	CDS	MUL_2230	NC_008611.1	2487587	2488291	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	2487587..2488291	Mycobacterium ulcerans Agy99	4550594
YP_906089.1	CDS	MUL_2231	NC_008611.1	2488316	2488633	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	2488316..2488633	Mycobacterium ulcerans Agy99	4550595
YP_906090.1	CDS	MUL_2232	NC_008611.1	2488814	2489263	D	Also detected in the extracellular matrix by proteomics, and in the membrane fraction.; cytoplasmic protein; function unknown. may be involved in a chaperoning process.; molecular chaperone	2488814..2489263	Mycobacterium ulcerans Agy99	4550596
YP_906091.1	CDS	folE_1	NC_008611.1	2489971	2490417	D	cytoplasmic protein; involved in the biosynthesis of tetrahydrofolate (at the first step) [catalytic activity: GTP + 2 H(2)O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3- trihydroxypropyl)DiHYD ro pteridine triphosphate]; GTP cyclohydrolase I FolE	2489971..2490417	Mycobacterium ulcerans Agy99	4550597
YP_906092.1	CDS	MUL_2234	NC_008611.1	2490452	2491339	R	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic and extracellular matrix fractions by proteomics.; membrane protein; hypothetical protein	complement(2490452..2491339)	Mycobacterium ulcerans Agy99	4550598
YP_906093.1	CDS	MUL_2236	NC_008611.1	2491790	2492674	R	membrane protein; function unknown.  possibly involved in signal transduction mechanisms.; hypothetical protein	complement(2491790..2492674)	Mycobacterium ulcerans Agy99	4550600
YP_906094.1	CDS	MUL_2237	NC_008611.1	2492843	2493109	R	cytoplasmic protein; hypothetical protein	complement(2492843..2493109)	Mycobacterium ulcerans Agy99	4550601
YP_906095.1	CDS	MUL_2238	NC_008611.1	2493106	2493558	R	cytoplasmic protein; the sigma factor is an initiation factor that promotes attachment of the RNA polymerase to specific initiation sites and then is released.; alternative RNA polymerase sigma factor	complement(2493106..2493558)	Mycobacterium ulcerans Agy99	4550602
YP_906096.1	CDS	MUL_2239	NC_008611.1	2493741	2494823	R	membrane protein; function unknown.  possibly involved in lipid metabolism.; hypothetical protein	complement(2493741..2494823)	Mycobacterium ulcerans Agy99	4550603
YP_906097.1	CDS	MUL_2241	NC_008611.1	2494995	2495519	R	cytoplasmic protein; hypothetical protein	complement(2494995..2495519)	Mycobacterium ulcerans Agy99	4550604
YP_906098.1	CDS	MUL_2242	NC_008611.1	2495678	2495869	D	hypothetical protein	2495678..2495869	Mycobacterium ulcerans Agy99	4550605
YP_906099.1	CDS	esxR	NC_008611.1	2495925	2496215	R	secreted protein; EsaT-6 family protein	complement(2495925..2496215)	Mycobacterium ulcerans Agy99	4550570
YP_906100.1	CDS	MUL_2245	NC_008611.1	2496583	2497869	R	membrane protein; PPE family protein	complement(2496583..2497869)	Mycobacterium ulcerans Agy99	4550572
YP_906101.1	CDS	MUL_2246	NC_008611.1	2497880	2498185	R	secreted protein; PE family protein	complement(2497880..2498185)	Mycobacterium ulcerans Agy99	4550573
YP_906102.1	CDS	MUL_2247	NC_008611.1	2498760	2499422	R	membrane protein; PPE family protein	complement(2498760..2499422)	Mycobacterium ulcerans Agy99	4550574
YP_906103.1	CDS	MUL_2249	NC_008611.1	2501416	2502252	R	cytoplasmic protein; hypothetical protein	complement(2501416..2502252)	Mycobacterium ulcerans Agy99	4550576
YP_906104.1	CDS	MUL_2250	NC_008611.1	2502459	2504369	R	membrane protein; PE-PGRS family protein	complement(2502459..2504369)	Mycobacterium ulcerans Agy99	4550577
YP_906105.1	CDS	MUL_2251	NC_008611.1	2504532	2505497	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(2504532..2505497)	Mycobacterium ulcerans Agy99	4550578
YP_906106.1	CDS	MUL_2252	NC_008611.1	2505600	2506670	R	membrane protein; thought to be involved in active transport of sugar across the membrane (import) responsible for energy coupling to the transport system.; sugar-transport ATP-binding protein ABC transporter	complement(2505600..2506670)	Mycobacterium ulcerans Agy99	4550579
YP_906107.1	CDS	MUL_2253	NC_008611.1	2506676	2507518	R	membrane protein; sugar ABC transporter	complement(2506676..2507518)	Mycobacterium ulcerans Agy99	4550580
YP_906108.1	CDS	MUL_2254	NC_008611.1	2507505	2508458	R	membrane protein; thought to be involved in active transport of sugar across the membrane (import) responsible for the translocation of the substrate across the membrane.; sugar ABC transporter integral membrane protein	complement(2507505..2508458)	Mycobacterium ulcerans Agy99	4550581
YP_906109.1	CDS	pncA	NC_008611.1	2510652	2511212	R	cytoplasmic protein; converts amides such as nicotinamide to corresponding acid.; pyrazinamidase/nicotinamidase, PncA	complement(2510652..2511212)	Mycobacterium ulcerans Agy99	4550584
YP_906110.1	CDS	MUL_2258	NC_008611.1	2511308	2512123	D	membrane protein; hypothetical protein	2511308..2512123	Mycobacterium ulcerans Agy99	4550585
YP_906111.1	CDS	MUL_2259	NC_008611.1	2512120	2512635	R	membrane protein; function unknown, in general gluconate kinase catalyzes the phosphoryl transfer from ATP to gluconate. the resulting product gluconate-6-phosphate is an important precursor of gluconate metabolism.; gluconate kinase	complement(2512120..2512635)	Mycobacterium ulcerans Agy99	4550586
YP_906112.1	CDS	lipT	NC_008611.1	2514633	2516138	R	cytoplasmic protein; converts unknown esters to corresponding free acid and alcohol; carboxylesterase, LipT	complement(2514633..2516138)	Mycobacterium ulcerans Agy99	4550588
YP_906113.1	CDS	lppI	NC_008611.1	2516217	2516897	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipoprotein LppI	2516217..2516897	Mycobacterium ulcerans Agy99	4550538
YP_906114.1	CDS	MUL_2263	NC_008611.1	2517227	2517544	D	cytoplasmic protein; hypothetical protein	2517227..2517544	Mycobacterium ulcerans Agy99	4550539
YP_906115.1	CDS	MUL_2264	NC_008611.1	2518033	2518413	D	membrane protein; hypothetical protein	2518033..2518413	Mycobacterium ulcerans Agy99	4550540
YP_906116.1	CDS	MUL_2265	NC_008611.1	2518555	2521215	R	Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; hypothetical protein	complement(2518555..2521215)	Mycobacterium ulcerans Agy99	4550541
YP_906117.1	CDS	pks12	NC_008611.1	2521288	2533863	R	cytoplasmic protein; required for mycoketide synthesis.; polyketide synthase	complement(2521288..2533863)	Mycobacterium ulcerans Agy99	4550542
YP_906118.1	CDS	MUL_2267	NC_008611.1	2534194	2534553	R	cytoplasmic protein; hypothetical protein	complement(2534194..2534553)	Mycobacterium ulcerans Agy99	4550543
YP_906119.1	CDS	MUL_2268	NC_008611.1	2534710	2535045	D	cytoplasmic protein; hypothetical protein	2534710..2535045	Mycobacterium ulcerans Agy99	4550544
YP_906120.1	CDS	ppm1B	NC_008611.1	2535066	2535872	R	This gene in two parts compared with MTB orthologue. Potential pseudogene but given same arrangement in M. marinum then this possibility seems less likely.; cytoplasmic protein; transfers mannose from GDP-mannose to all endogenous polyprenol-phosphates in mycobacterium tuberculosis; C-term polyprenol-monophosphomannose synthase Ppm1B	complement(2535066..2535872)	Mycobacterium ulcerans Agy99	4550545
YP_906121.1	CDS	ppm1A	NC_008611.1	2535898	2537715	R	cytoplasmic protein; transfers mannose from GDP-mannose to all endogenous polyprenol-phosphates in mycobacterium tuberculosis; N-term polyprenol-monophosphomannose synthase Ppm1A	complement(2535898..2537715)	Mycobacterium ulcerans Agy99	4550546
YP_906122.1	CDS	MUL_2270	NC_008611.1	2538005	2539609	R	domain identity with predicted metal-dependent hydrolases with the TIM-barrel folds; hypothetical protein	complement(2538005..2539609)	Mycobacterium ulcerans Agy99	4550547
YP_906123.1	CDS	fxsA	NC_008611.1	2539640	2540272	R	F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein	complement(2539640..2540272)	Mycobacterium ulcerans Agy99	4550548
YP_906124.1	CDS	MUL_2272	NC_008611.1	2540345	2541055	D	cytoplasmic protein; domain identity with dienelactone hydrolases; hypothetical protein	2540345..2541055	Mycobacterium ulcerans Agy99	4550549
YP_906125.1	CDS	MUL_2273	NC_008611.1	2541330	2542934	D	membrane protein; hypothetical protein	2541330..2542934	Mycobacterium ulcerans Agy99	4550550
YP_906126.1	CDS	MUL_2274	NC_008611.1	2542931	2544538	R	membrane protein; transmembrane protein	complement(2542931..2544538)	Mycobacterium ulcerans Agy99	4550551
YP_906127.1	CDS	MUL_2275	NC_008611.1	2544663	2545541	R	membrane protein; function unknown.  domain identity to ThiJ-like intracellular proteases/amidases; hypothetical protein	complement(2544663..2545541)	Mycobacterium ulcerans Agy99	4550552
YP_906128.1	CDS	MUL_2276	NC_008611.1	2545552	2545935	R	cytoplasmic protein; hypothetical protein	complement(2545552..2545935)	Mycobacterium ulcerans Agy99	4550553
YP_906129.1	CDS	cobN	NC_008611.1	2545986	2549558	R	with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN	complement(2545986..2549558)	Mycobacterium ulcerans Agy99	4550554
YP_906130.1	CDS	MUL_2278	NC_008611.1	2549551	2549772	R	cytoplasmic protein; hypothetical protein	complement(2549551..2549772)	Mycobacterium ulcerans Agy99	4550555
YP_906131.1	CDS	MUL_2279	NC_008611.1	2549838	2551469	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; membrane-bound oxidoreductase	complement(2549838..2551469)	Mycobacterium ulcerans Agy99	4550556
YP_906132.1	CDS	MUL_2280	NC_008611.1	2551543	2551860	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(2551543..2551860)	Mycobacterium ulcerans Agy99	4550520
YP_906133.1	CDS	MUL_2281	NC_008611.1	2551885	2552589	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(2551885..2552589)	Mycobacterium ulcerans Agy99	4550521
YP_906134.1	CDS	MUL_2282	NC_008611.1	2552918	2553745	D	cytoplasmic protein; cellular metabolism; short chain dehydrogenase	2552918..2553745	Mycobacterium ulcerans Agy99	4550522
YP_906135.1	CDS	MUL_2283	NC_008611.1	2553750	2554637	D	cytoplasmic protein; hypothetical protein	2553750..2554637	Mycobacterium ulcerans Agy99	4550523
YP_906136.1	CDS	MUL_2284	NC_008611.1	2554774	2555394	R	cytoplasmic protein; function unknown.  contains adenylate cyclase domain; hypothetical protein	complement(2554774..2555394)	Mycobacterium ulcerans Agy99	4550524
YP_906137.1	CDS	MUL_2288	NC_008611.1	2558891	2560000	D	cobalamin biosynthesis protein	2558891..2560000	Mycobacterium ulcerans Agy99	4550526
YP_906138.1	CDS	cobH	NC_008611.1	2560018	2560644	D	catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase	2560018..2560644	Mycobacterium ulcerans Agy99	4550527
YP_906139.1	CDS	cobI	NC_008611.1	2560641	2562110	D	detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in cobalamin biosynthesis; bifunctional protein, CobI-CobJ fusion protein	2560641..2562110	Mycobacterium ulcerans Agy99	4550528
YP_906140.1	CDS	MUL_2291	NC_008611.1	2562107	2563333	R	cytoplasmic protein; hypothetical protein	complement(2562107..2563333)	Mycobacterium ulcerans Agy99	4550529
YP_906141.1	CDS	mmpS4_1	NC_008611.1	2566357	2566788	R	membrane protein; membrane transporter	complement(2566357..2566788)	Mycobacterium ulcerans Agy99	4550531
YP_906142.1	CDS	blaC	NC_008611.1	2567140	2568075	R	Also detected in the cytoplasmic fraction by proteomics; membrane protein; hydrolyses beta-lactams to generate corresponding beta-amino acid [catalytic activity: a beta-lactam + H(2)O = a substituted beta-amino acid]; class a beta-lactamase, BlaC	complement(2567140..2568075)	Mycobacterium ulcerans Agy99	4550532
YP_906143.1	CDS	sigC	NC_008611.1	2568205	2568765	D	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigC	2568205..2568765	Mycobacterium ulcerans Agy99	4550533
YP_906144.1	CDS	cobK	NC_008611.1	2568771	2569499	R	CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase	complement(2568771..2569499)	Mycobacterium ulcerans Agy99	4550534
YP_906145.1	CDS	cobM	NC_008611.1	2569496	2570245	R	cytoplasmic protein; involved in cobalamin biosynthesis; precorrin-4 C11-methyltransferase, CobM	complement(2569496..2570245)	Mycobacterium ulcerans Agy99	4550535
YP_906146.1	CDS	cobL	NC_008611.1	2570242	2571414	R	cytoplasmic protein; precorrin-6y methyltransferase, CobL	complement(2570242..2571414)	Mycobacterium ulcerans Agy99	4550536
YP_906147.1	CDS	MUL_2299	NC_008611.1	2571411	2572160	R	cytoplasmic protein; short chain dehydrogenase	complement(2571411..2572160)	Mycobacterium ulcerans Agy99	4550537
YP_906148.1	CDS	MUL_2300	NC_008611.1	2572193	2572606	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; hypothetical protein	2572193..2572606	Mycobacterium ulcerans Agy99	4550483
YP_906149.1	CDS	MUL_2303	NC_008611.1	2574349	2575395	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2574349..2575395	Mycobacterium ulcerans Agy99	4550486
YP_906150.1	CDS	MUL_2304	NC_008611.1	2576340	2577185	R	membrane protein; hypothetical protein	complement(2576340..2577185)	Mycobacterium ulcerans Agy99	4550487
YP_906151.1	CDS	MUL_2305	NC_008611.1	2577182	2579467	R	cytoplasmic protein; hypothetical protein	complement(2577182..2579467)	Mycobacterium ulcerans Agy99	4550488
YP_906152.1	CDS	MUL_2306	NC_008611.1	2580144	2580398	D	cytoplasmic protein; transposition of an insertion sequence; transposase	2580144..2580398	Mycobacterium ulcerans Agy99	4550489
YP_906153.1	CDS	MUL_2307	NC_008611.1	2580689	2581201	D	secreted protein; hypothetical protein	2580689..2581201	Mycobacterium ulcerans Agy99	4550490
YP_906154.1	CDS	MUL_2308	NC_008611.1	2581255	2581704	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; hypothetical protein	2581255..2581704	Mycobacterium ulcerans Agy99	4550491
YP_906155.1	CDS	MUL_2309	NC_008611.1	2582380	2582889	D	membrane protein; hypothetical protein	2582380..2582889	Mycobacterium ulcerans Agy99	4550492
YP_906156.1	CDS	MUL_2312	NC_008611.1	2585051	2586019	D	cytoplasmic protein; hypothetical protein	2585051..2586019	Mycobacterium ulcerans Agy99	4550494
YP_906157.1	CDS	MUL_2313	NC_008611.1	2586116	2589457	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(2586116..2589457)	Mycobacterium ulcerans Agy99	4550495
YP_906158.1	CDS	MUL_2314	NC_008611.1	2589450	2590145	R	cytoplasmic protein; hypothetical protein	complement(2589450..2590145)	Mycobacterium ulcerans Agy99	4550496
YP_906159.1	CDS	MUL_2315	NC_008611.1	2590186	2591625	R	cytoplasmic protein; hypothetical protein	complement(2590186..2591625)	Mycobacterium ulcerans Agy99	4550497
YP_906160.1	CDS	MUL_2317	NC_008611.1	2592285	2592548	R	cytoplasmic protein; hypothetical protein	complement(2592285..2592548)	Mycobacterium ulcerans Agy99	4550498
YP_906161.1	CDS	MUL_2318	NC_008611.1	2592555	2595149	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(2592555..2595149)	Mycobacterium ulcerans Agy99	4550499
YP_906162.1	CDS	MUL_2320	NC_008611.1	2595346	2597589	R	cytoplasmic protein; hypothetical protein	complement(2595346..2597589)	Mycobacterium ulcerans Agy99	4550465
YP_906163.1	CDS	pepE	NC_008611.1	2597626	2598753	R	Detected in the cytoplamic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hydrolysis of peptide bonds; dipeptidase PepE	complement(2597626..2598753)	Mycobacterium ulcerans Agy99	4550466
YP_906164.1	CDS	MUL_2322	NC_008611.1	2598877	2599833	D	cytoplasmic protein; involved in DNA metabolism; 5'-3' exonuclease	2598877..2599833	Mycobacterium ulcerans Agy99	4550467
YP_906165.1	CDS	MUL_2323	NC_008611.1	2599846	2600610	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; hypothetical protein	complement(2599846..2600610)	Mycobacterium ulcerans Agy99	4550468
YP_906166.1	CDS	helY	NC_008611.1	2600717	2603473	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; DNA helicase activity.; ATP-dependent DNA helicase HelY	complement(2600717..2603473)	Mycobacterium ulcerans Agy99	4550469
YP_906167.1	CDS	tatC	NC_008611.1	2603561	2604511	R	membrane protein; involved in proteins export: required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. this sec-independent pathway is termed tat for twin- arginine translocation system.; sec-independent protein translocase transmembrane protein TatC	complement(2603561..2604511)	Mycobacterium ulcerans Agy99	4550470
YP_906168.1	CDS	tatA	NC_008611.1	2604557	2604823	R	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A	complement(2604557..2604823)	Mycobacterium ulcerans Agy99	4550471
YP_906169.1	CDS	MUL_2327	NC_008611.1	2604950	2605918	R	cytoplasmic protein; hypothetical protein	complement(2604950..2605918)	Mycobacterium ulcerans Agy99	4550472
YP_906170.1	CDS	MUL_2328	NC_008611.1	2605968	2606966	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; contains domain homology to transcriptional regulators; hypothetical protein	complement(2605968..2606966)	Mycobacterium ulcerans Agy99	4550473
YP_906171.1	CDS	MUL_2329	NC_008611.1	2607020	2608378	R	cytoplasmic protein; hypothetical protein	complement(2607020..2608378)	Mycobacterium ulcerans Agy99	4550474
YP_906172.1	CDS	prcA	NC_008611.1	2608436	2609239	R	Detected in the cytoplasmic, membrane and secreted protein fractions by proteomics.; cytoplasmic protein; protein degradation; proteasome PrcA	complement(2608436..2609239)	Mycobacterium ulcerans Agy99	4550475
YP_906173.1	CDS	prcB	NC_008611.1	2609236	2610105	R	Detected in the cytoplasmic, the membrane and the secreted fractions by proteomics.; cytoplasmic protein; protein degradation; proteasome PrcB	complement(2609236..2610105)	Mycobacterium ulcerans Agy99	4550476
YP_906174.1	CDS	MUL_2332	NC_008611.1	2610102	2610296	R	Detected in the cytoplasmic ans secreted fractions by 2D-LC-MS/MS.; cytoplasmic protein; hypothetical protein	complement(2610102..2610296)	Mycobacterium ulcerans Agy99	4550477
YP_906175.1	CDS	MUL_2333	NC_008611.1	2610468	2611976	R	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; hypothetical protein	complement(2610468..2611976)	Mycobacterium ulcerans Agy99	4550478
YP_906176.1	CDS	MUL_2334	NC_008611.1	2612273	2613370	D	Detected in the cytoplasmic fraction by proteomics.; cytoplasmic protein; hypothetical protein	2612273..2613370	Mycobacterium ulcerans Agy99	4550479
YP_906177.1	CDS	MUL_2335	NC_008611.1	2613578	2614546	D	membrane protein; integral membrane protein	2613578..2614546	Mycobacterium ulcerans Agy99	4550480
YP_906178.1	CDS	MUL_2336	NC_008611.1	2614607	2615182	D	cytoplasmic protein; hypothetical protein	2614607..2615182	Mycobacterium ulcerans Agy99	4550481
YP_906179.1	CDS	MUL_2337	NC_008611.1	2615204	2617033	R	cytoplasmic protein; ATPase	complement(2615204..2617033)	Mycobacterium ulcerans Agy99	4550482
YP_906180.1	CDS	lppK	NC_008611.1	2617331	2617990	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipoprotein LppK	2617331..2617990	Mycobacterium ulcerans Agy99	4550450
YP_906181.1	CDS	MUL_2339	NC_008611.1	2617999	2618301	D	cytoplasmic protein; hypothetical protein	2617999..2618301	Mycobacterium ulcerans Agy99	4550451
YP_906182.1	CDS	MUL_2340	NC_008611.1	2618093	2619157	R	cytoplasmic protein; involved in transfer of methyl group (from S- adenosyl-L-methionine to a substrate); RNA methyltransferase	complement(2618093..2619157)	Mycobacterium ulcerans Agy99	4550452
YP_906183.1	CDS	MUL_2341	NC_008611.1	2619231	2620112	D	cytoplasmic protein; has significant domain identity to RecB family exonucleases; hypothetical protein	2619231..2620112	Mycobacterium ulcerans Agy99	4550453
YP_906184.1	CDS	MUL_2342	NC_008611.1	2620109	2620888	D	cytoplasmic protein; hypothetical protein	2620109..2620888	Mycobacterium ulcerans Agy99	4550454
YP_906185.1	CDS	MUL_2344	NC_008611.1	2621540	2622586	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2621540..2622586	Mycobacterium ulcerans Agy99	4550456
YP_906186.1	CDS	MUL_2347	NC_008611.1	2626438	2627772	R	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	complement(2626438..2627772)	Mycobacterium ulcerans Agy99	4550457
YP_906187.1	CDS	MUL_2350	NC_008611.1	2636142	2637476	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	2636142..2637476	Mycobacterium ulcerans Agy99	4550460
YP_906188.1	CDS	MUL_2351	NC_008611.1	2637929	2638975	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2637929..2638975	Mycobacterium ulcerans Agy99	4550461
YP_906189.1	CDS	hisG	NC_008611.1	2639255	2640115	R	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase	complement(2639255..2640115)	Mycobacterium ulcerans Agy99	4550462
YP_906190.1	CDS	hisE	NC_008611.1	2640112	2640393	R	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase	complement(2640112..2640393)	Mycobacterium ulcerans Agy99	4550463
YP_906191.1	CDS	MUL_2354	NC_008611.1	2640512	2642440	R	membrane protein; PE-PGRS family protein	complement(2640512..2642440)	Mycobacterium ulcerans Agy99	4550464
YP_906192.1	CDS	MUL_2357	NC_008611.1	2644847	2645725	D	cytoplasmic protein; hypothetical protein	2644847..2645725	Mycobacterium ulcerans Agy99	4550433
YP_906193.1	CDS	MUL_2358	NC_008611.1	2645863	2646984	R	membrane protein; function unknown, probably involved in cellular metabolism.; FAD-dependent oxidoreductase	complement(2645863..2646984)	Mycobacterium ulcerans Agy99	4550434
YP_906194.1	CDS	MUL_2359	NC_008611.1	2647018	2647899	R	cytoplasmic protein; short chain dehydrogenase	complement(2647018..2647899)	Mycobacterium ulcerans Agy99	4550435
YP_906195.1	CDS	mshC	NC_008611.1	2647923	2649158	R	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase	complement(2647923..2649158)	Mycobacterium ulcerans Agy99	4550436
YP_906196.1	CDS	gabD1_1	NC_008611.1	2649428	2651044	D	cytoplasmic protein; involved in 4-aminobutyrate (GabA) degradation pathway [catalytic activity: succinate semialdehyde + NAD(P)(+) + H(2)O = succinate + NAD(P)H]; succinate-semialdehyde dehydrogenase [NADP+] dependent, GabD1	2649428..2651044	Mycobacterium ulcerans Agy99	4550437
YP_906197.1	CDS	cysQ	NC_008611.1	2651073	2651864	R	cytoplasmic protein; may help control the pool of 3'-phosphoadenoside 5'- phosphosulfate, or its use in sulfite synthesis (by similarity); monophosphatase CysQ	complement(2651073..2651864)	Mycobacterium ulcerans Agy99	4550438
YP_906198.1	CDS	MUL_2363	NC_008611.1	2651976	2652761	R	cytoplasmic protein; hypothetical protein	complement(2651976..2652761)	Mycobacterium ulcerans Agy99	4550439
YP_906199.1	CDS	MUL_2364	NC_008611.1	2652775	2653362	R	Detected in the cytoplasmic and secreted fractions by 2D-LC-MS/MS.; cytoplasmic protein; hypothetical protein	complement(2652775..2653362)	Mycobacterium ulcerans Agy99	4550440
YP_906200.1	CDS	MUL_2365	NC_008611.1	2653451	2654197	R	cytoplasmic protein; hypothetical protein	complement(2653451..2654197)	Mycobacterium ulcerans Agy99	4550441
YP_906201.1	CDS	MUL_2366	NC_008611.1	2654194	2655024	R	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase	complement(2654194..2655024)	Mycobacterium ulcerans Agy99	4550442
YP_906202.1	CDS	MUL_2367	NC_008611.1	2655073	2655453	R	cytoplasmic protein; hypothetical protein	complement(2655073..2655453)	Mycobacterium ulcerans Agy99	4550443
YP_906203.1	CDS	lppL	NC_008611.1	2655513	2656583	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipoprotein LppL	2655513..2656583	Mycobacterium ulcerans Agy99	4550444
YP_906204.1	CDS	MUL_2369	NC_008611.1	2656580	2656843	D	cytoplasmic protein; hypothetical protein	2656580..2656843	Mycobacterium ulcerans Agy99	4550445
YP_906205.1	CDS	pyrD	NC_008611.1	2656876	2657958	D	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2	2656876..2657958	Mycobacterium ulcerans Agy99	4550446
YP_906206.1	CDS	MUL_2371	NC_008611.1	2657970	2659358	R	cytoplasmic protein; hypothetical protein	complement(2657970..2659358)	Mycobacterium ulcerans Agy99	4550447
YP_906207.1	CDS	MUL_2372	NC_008611.1	2659485	2660012	R	Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; function unknown but contains bacterial/archael phosphatidylethanolamine-binding (PEBP) domain; hypothetical protein	complement(2659485..2660012)	Mycobacterium ulcerans Agy99	4550448
YP_906208.1	CDS	MUL_2373	NC_008611.1	2660039	2661394	R	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; function unknown - but has domain identity with cetylornithine deacetylase/succinyl-diaminopimelate desuccinylase and related deacylases [amino acid transport and metabolism]; hypothetical protein	complement(2660039..2661394)	Mycobacterium ulcerans Agy99	4550449
YP_906209.1	CDS	MUL_2376	NC_008611.1	2662592	2663041	D	cytoplasmic protein; hypothetical protein	2662592..2663041	Mycobacterium ulcerans Agy99	4550416
YP_906210.1	CDS	MUL_2377	NC_008611.1	2662972	2663787	R	cytoplasmic protein; orthologue in M. tuberculosis H37Rv has been shown to catalyze the transfer of a methyl group onto the lipid moiety of phthiotriol dimycocerosates to form DIM.; methyltransferase	complement(2662972..2663787)	Mycobacterium ulcerans Agy99	4550417
YP_906211.1	CDS	MUL_2379	NC_008611.1	2664299	2664529	R	cytoplasmic protein; hypothetical protein	complement(2664299..2664529)	Mycobacterium ulcerans Agy99	4550419
YP_906212.1	CDS	mbtH	NC_008611.1	2665397	2665627	R	cytoplasmic protein; thought to be involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins.; protein MbtH	complement(2665397..2665627)	Mycobacterium ulcerans Agy99	4550421
YP_906213.1	CDS	mmpS4	NC_008611.1	2668786	2669256	R	membrane protein; membrane protein MmpS4	complement(2668786..2669256)	Mycobacterium ulcerans Agy99	4550423
YP_906214.1	CDS	MUL_2384	NC_008611.1	2669561	2670607	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2669561..2670607	Mycobacterium ulcerans Agy99	4550424
YP_906215.1	CDS	MUL_2386	NC_008611.1	2671459	2671980	D	Detected in the membrane fraction by proteomics.; secreted protein; hypothetical protein	2671459..2671980	Mycobacterium ulcerans Agy99	4550426
YP_906216.1	CDS	MUL_2387	NC_008611.1	2672027	2672707	R	cytoplasmic protein; hypothetical protein	complement(2672027..2672707)	Mycobacterium ulcerans Agy99	4550427
YP_906217.1	CDS	MUL_2388	NC_008611.1	2672923	2673540	D	hypothetical protein	2672923..2673540	Mycobacterium ulcerans Agy99	4550428
YP_906218.1	CDS	MUL_2389	NC_008611.1	2673544	2674269	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	2673544..2674269	Mycobacterium ulcerans Agy99	4550429
YP_906219.1	CDS	MUL_2390	NC_008611.1	2674336	2675202	D	cytoplasmic protein; hypothetical protein	2674336..2675202	Mycobacterium ulcerans Agy99	4550430
YP_906220.1	CDS	MUL_2391	NC_008611.1	2675246	2675947	R	membrane protein; hypothetical protein	complement(2675246..2675947)	Mycobacterium ulcerans Agy99	4550367
YP_906221.1	CDS	MUL_2392	NC_008611.1	2676195	2676458	D	membrane protein; hypothetical protein	2676195..2676458	Mycobacterium ulcerans Agy99	4550368
YP_906222.1	CDS	MUL_2393	NC_008611.1	2676498	2676851	R	cytoplasmic protein; hypothetical protein	complement(2676498..2676851)	Mycobacterium ulcerans Agy99	4550369
YP_906223.1	CDS	MUL_2394	NC_008611.1	2676950	2677177	D	cytoplasmic protein; hypothetical protein	2676950..2677177	Mycobacterium ulcerans Agy99	4550370
YP_906224.1	CDS	MUL_2395	NC_008611.1	2677467	2678669	D	PE26; membrane protein; PE family protein	2677467..2678669	Mycobacterium ulcerans Agy99	4550371
YP_906225.1	CDS	MUL_2397	NC_008611.1	2679184	2680029	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics.; cytoplasmic protein; hypothetical protein	complement(2679184..2680029)	Mycobacterium ulcerans Agy99	4550373
YP_906226.1	CDS	MUL_2398	NC_008611.1	2680007	2681086	R	membrane protein; hypothetical protein	complement(2680007..2681086)	Mycobacterium ulcerans Agy99	4550374
YP_906227.1	CDS	MUL_2399	NC_008611.1	2681083	2682324	R	membrane protein; ATPase; possibly catalyzes the transport of undeterminated substrate with hydrolysis of ATP [catalytic activity: ATP + H(2)O + undeterminated substrate(in) = ADP + phosphate + undeterminated substrate(out)]; ATPase	complement(2681083..2682324)	Mycobacterium ulcerans Agy99	4550375
YP_906228.1	CDS	MUL_2401	NC_008611.1	2684249	2685295	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2684249..2685295)	Mycobacterium ulcerans Agy99	4550377
YP_906229.1	CDS	MUL_2404	NC_008611.1	2687010	2688341	D	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	2687010..2688341	Mycobacterium ulcerans Agy99	4550379
YP_906230.1	CDS	MUL_2405	NC_008611.1	2688390	2689436	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2688390..2689436)	Mycobacterium ulcerans Agy99	4550380
YP_906231.1	CDS	smpB	NC_008611.1	2690078	2690584	R	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein	complement(2690078..2690584)	Mycobacterium ulcerans Agy99	4550381
YP_906232.1	CDS	ftsX	NC_008611.1	2690587	2691480	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in growth (principally during log phase cells) thought to be involved in active transport of septation component across the membrane. responsible for the translocation of the substrate across the membrane. coded for in an operon essential for ce; cell division protein FtsX	complement(2690587..2691480)	Mycobacterium ulcerans Agy99	4550382
YP_906233.1	CDS	ftsE	NC_008611.1	2691481	2692170	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in growth. thought to be involved in active transport of septation component across the membrane. responsible for energy coupling to the transport system. coded for in an operon essential for cell division.; cell division ATP-binding protein FtsE	complement(2691481..2692170)	Mycobacterium ulcerans Agy99	4550350
YP_906234.1	CDS	MUL_2410	NC_008611.1	2692215	2692715	R	membrane protein; function unknown: predicted solute binding protein; hypothetical protein	complement(2692215..2692715)	Mycobacterium ulcerans Agy99	4550351
YP_906235.1	CDS	MUL_2411	NC_008611.1	2692718	2693704	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown but contains mechanosensitive (ms) ion channel forming domain with a possible role in cell envelope biogenesis.; transmembrane protein	complement(2692718..2693704)	Mycobacterium ulcerans Agy99	4550352
YP_906236.1	CDS	prfB	NC_008611.1	2693694	2694809	R	recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2	complement(2693694..2694809)	Mycobacterium ulcerans Agy99	4550353
YP_906237.1	CDS	fprA_1	NC_008611.1	2694868	2696313	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics.; cytoplasmic protein; generates oxidized ferredoxin from ferredoxin [catalytic activity: reduced ferredoxin + NADP(+) = oxidized ferredoxin + NADPH]; NADPH:adrenodoxin oxidoreductase FprA	2694868..2696313	Mycobacterium ulcerans Agy99	4550354
YP_906238.1	CDS	MUL_2414	NC_008611.1	2696898	2697944	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2696898..2697944	Mycobacterium ulcerans Agy99	4550355
YP_906239.1	CDS	MUL_2416	NC_008611.1	2699261	2700865	R	cytoplasmic protein; hypothetical protein	complement(2699261..2700865)	Mycobacterium ulcerans Agy99	4550357
YP_906240.1	CDS	MUL_2417	NC_008611.1	2701011	2702018	D	cytoplasmic protein; hypothetical protein	2701011..2702018	Mycobacterium ulcerans Agy99	4550358
YP_906241.1	CDS	MUL_2418	NC_008611.1	2702023	2702451	D	Also detected in the extracellular matrix and the membrane fraction by proteomics.; cytoplasmic protein; hypothetical protein	2702023..2702451	Mycobacterium ulcerans Agy99	4550359
YP_906242.1	CDS	MUL_2419	NC_008611.1	2702536	2702958	R	cytoplasmic protein; hypothetical protein	complement(2702536..2702958)	Mycobacterium ulcerans Agy99	4550360
YP_906243.1	CDS	MUL_2420	NC_008611.1	2702955	2704343	R	cytoplasmic protein; hypothetical protein	complement(2702955..2704343)	Mycobacterium ulcerans Agy99	4550361
YP_906244.1	CDS	MUL_2421	NC_008611.1	2704487	2705533	D	cytoplasmic protein; hypothetical protein	2704487..2705533	Mycobacterium ulcerans Agy99	4550362
YP_906245.1	CDS	devS	NC_008611.1	2705513	2707270	R	membrane protein; sensor part of the two component regulatory system DevR/DevS. thought to control HspX|Acr expression.; two component sensor histidine kinase DevS	complement(2705513..2707270)	Mycobacterium ulcerans Agy99	4550363
YP_906246.1	CDS	devR	NC_008611.1	2707282	2707932	R	cytoplasmic protein; regulator part of the two component regulatory system DevR/DevS. controls HspX|Acr expression.; two component transcriptional regulatory protein DevR	complement(2707282..2707932)	Mycobacterium ulcerans Agy99	4550364
YP_906247.1	CDS	MUL_2424	NC_008611.1	2707956	2708750	R	membrane protein; may play a role in the adaptation to hypoxia, participating in the phosphorelay in the two component regulatory system DevR/DevS; hypothetical protein	complement(2707956..2708750)	Mycobacterium ulcerans Agy99	4550365
YP_906248.1	CDS	MUL_2425	NC_008611.1	2708926	2710260	R	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	complement(2708926..2710260)	Mycobacterium ulcerans Agy99	4550366
YP_906249.1	CDS	MUL_2426	NC_008611.1	2710381	2711427	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2710381..2711427)	Mycobacterium ulcerans Agy99	4550333
YP_906250.1	CDS	MUL_2427	NC_008611.1	2712510	2713655	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; PPE family protein	2712510..2713655	Mycobacterium ulcerans Agy99	4550334
YP_906251.1	CDS	MUL_2428	NC_008611.1	2714196	2715344	D	PPE51; membrane protein; PPE family protein	2714196..2715344	Mycobacterium ulcerans Agy99	4550335
YP_906252.1	CDS	MUL_2429	NC_008611.1	2715363	2715698	R	membrane protein; hypothetical protein	complement(2715363..2715698)	Mycobacterium ulcerans Agy99	4550336
YP_906253.1	CDS	MUL_2430	NC_008611.1	2715722	2716510	D	cytoplasmic protein; function unknown, involved in cellular metabolism.; monophosphatase	2715722..2716510	Mycobacterium ulcerans Agy99	4550337
YP_906254.1	CDS	fadE24	NC_008611.1	2716592	2717989	D	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE24	2716592..2717989	Mycobacterium ulcerans Agy99	4550338
YP_906255.1	CDS	fadE23	NC_008611.1	2718044	2719249	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE23	2718044..2719249	Mycobacterium ulcerans Agy99	4550339
YP_906256.1	CDS	ilvB1_1	NC_008611.1	2719259	2720935	R	catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase	complement(2719259..2720935)	Mycobacterium ulcerans Agy99	4550340
YP_906257.1	CDS	MUL_2434	NC_008611.1	2720932	2721708	R	cytoplasmic protein; function unknown, possible role secondary metabolite biosynthesis; alpha-acetolactate decarboxylase	complement(2720932..2721708)	Mycobacterium ulcerans Agy99	4550341
YP_906258.1	CDS	MUL_2435	NC_008611.1	2721757	2722791	R	catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase	complement(2721757..2722791)	Mycobacterium ulcerans Agy99	4550342
YP_906259.2	CDS	mhpF	NC_008611.1	2722788	2723735	R	catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase	complement(2722788..2723735)	Mycobacterium ulcerans Agy99	4550343
YP_906260.1	CDS	MUL_2437	NC_008611.1	2724109	2725344	D	Potential extended N-term caused by an u/s DNA deletion and point mutation that has created a fusion of MON6244 and MON2437; membrane protein; hypothetical protein	2724109..2725344	Mycobacterium ulcerans Agy99	4550344
YP_906261.1	CDS	MUL_2438	NC_008611.1	2725412	2726410	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	2725412..2726410	Mycobacterium ulcerans Agy99	4550345
YP_906262.1	CDS	fadB4	NC_008611.1	2726453	2727424	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in lipid degradation [catalytic activity: NADPH + quinone = NADP(+) + semiquinone]; NADPH quinone oxidoreductase FadB4	2726453..2727424	Mycobacterium ulcerans Agy99	4550346
YP_906263.1	CDS	MUL_2440	NC_008611.1	2727442	2729355	R	PPE28; membrane protein; PPE family protein	complement(2727442..2729355)	Mycobacterium ulcerans Agy99	4550347
YP_906264.1	CDS	MUL_2441	NC_008611.1	2729451	2730785	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	2729451..2730785	Mycobacterium ulcerans Agy99	4550348
YP_906265.1	CDS	MUL_2442	NC_008611.1	2730856	2731902	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2730856..2731902)	Mycobacterium ulcerans Agy99	4550349
YP_906266.1	CDS	MUL_2443	NC_008611.1	2732267	2733412	D	cytoplasmic protein; oxidoreductase	2732267..2733412	Mycobacterium ulcerans Agy99	4550315
YP_906267.1	CDS	MUL_2446	NC_008611.1	2734612	2735817	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	2734612..2735817	Mycobacterium ulcerans Agy99	4550317
YP_906268.1	CDS	MUL_2447	NC_008611.1	2735814	2736710	D	cytoplasmic protein; hypothetical protein	2735814..2736710	Mycobacterium ulcerans Agy99	4550318
YP_906269.1	CDS	MUL_2448	NC_008611.1	2736710	2737351	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	2736710..2737351	Mycobacterium ulcerans Agy99	4550319
YP_906270.1	CDS	MUL_2450	NC_008611.1	2738611	2739573	D	cytoplasmic protein; hypothetical protein	2738611..2739573	Mycobacterium ulcerans Agy99	4550321
YP_906271.1	CDS	MUL_5092	NC_008611.1	2739573	2739914	D	cytoplasmic protein; hypothetical protein	2739573..2739914	Mycobacterium ulcerans Agy99	4550322
YP_906272.1	CDS	MUL_2451	NC_008611.1	2739926	2740336	D	cytoplasmic protein; hypothetical protein	2739926..2740336	Mycobacterium ulcerans Agy99	4550323
YP_906273.1	CDS	MUL_2452	NC_008611.1	2740372	2740911	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	2740372..2740911	Mycobacterium ulcerans Agy99	4550324
YP_906274.1	CDS	MUL_2453	NC_008611.1	2740986	2741387	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS; cytoplasmic protein; two-component system response regulator	2740986..2741387	Mycobacterium ulcerans Agy99	4550325
YP_906275.1	CDS	MUL_2455	NC_008611.1	2742334	2743380	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2742334..2743380)	Mycobacterium ulcerans Agy99	4550327
YP_906276.1	CDS	MUL_2457	NC_008611.1	2746024	2746728	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	2746024..2746728	Mycobacterium ulcerans Agy99	4550329
YP_906277.1	CDS	MUL_2458	NC_008611.1	2746753	2747070	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	2746753..2747070	Mycobacterium ulcerans Agy99	4550330
YP_906278.1	CDS	nuoA	NC_008611.1	2747699	2748082	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A	2747699..2748082	Mycobacterium ulcerans Agy99	4550331
YP_906279.1	CDS	nuoB	NC_008611.1	2748091	2748645	D	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B	2748091..2748645	Mycobacterium ulcerans Agy99	4550332
YP_906280.1	CDS	nuoC	NC_008611.1	2748642	2749358	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C	2748642..2749358	Mycobacterium ulcerans Agy99	4550298
YP_906281.1	CDS	nuoD	NC_008611.1	2749378	2750676	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D	2749378..2750676	Mycobacterium ulcerans Agy99	4550299
YP_906282.1	CDS	nuoE	NC_008611.1	2750673	2751428	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E	2750673..2751428	Mycobacterium ulcerans Agy99	4550300
YP_906283.1	CDS	nuoF	NC_008611.1	2751428	2752774	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); involved in aerobic|anaerobic respiration [catalytic activity: NADH + ubiquinone = NAD(+) + ubiquinol]; NADH dehydrogenase I subunit F	2751428..2752774	Mycobacterium ulcerans Agy99	4550301
YP_906284.1	CDS	nuoG	NC_008611.1	2752771	2755188	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G	2752771..2755188	Mycobacterium ulcerans Agy99	4550302
YP_906285.1	CDS	nuoH	NC_008611.1	2755238	2756512	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H	2755238..2756512	Mycobacterium ulcerans Agy99	4550303
YP_906286.1	CDS	nuoI	NC_008611.1	2756505	2757050	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I	2756505..2757050	Mycobacterium ulcerans Agy99	4550304
YP_906287.1	CDS	nuoJ	NC_008611.1	2757047	2757835	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J	2757047..2757835	Mycobacterium ulcerans Agy99	4550305
YP_906288.1	CDS	nuoK	NC_008611.1	2757832	2758131	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K	2757832..2758131	Mycobacterium ulcerans Agy99	4550306
YP_906289.1	CDS	nuoL	NC_008611.1	2758142	2760043	D	Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L	2758142..2760043	Mycobacterium ulcerans Agy99	4550307
YP_906290.1	CDS	nuoM	NC_008611.1	2760037	2761626	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M	2760037..2761626	Mycobacterium ulcerans Agy99	4550308
YP_906291.1	CDS	nuoN	NC_008611.1	2761623	2763209	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N	2761623..2763209	Mycobacterium ulcerans Agy99	4550309
YP_906292.1	CDS	MUL_2474	NC_008611.1	2764120	2765166	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2764120..2765166	Mycobacterium ulcerans Agy99	4550311
YP_906293.1	CDS	MUL_2475	NC_008611.1	2766481	2766930	R	membrane protein; hypothetical protein	complement(2766481..2766930)	Mycobacterium ulcerans Agy99	4550312
YP_906294.1	CDS	MUL_2476	NC_008611.1	2766932	2768209	R	membrane protein; hypothetical protein	complement(2766932..2768209)	Mycobacterium ulcerans Agy99	4550313
YP_906295.1	CDS	moxR3	NC_008611.1	2768223	2769191	R	cytoplasmic protein; involved in transcriptional mechanism; regulates methanol dehydrogenase.; methanol dehydrogenase transcriptional regulatory protein MoxR3	complement(2768223..2769191)	Mycobacterium ulcerans Agy99	4550314
YP_906296.1	CDS	MUL_2480	NC_008611.1	2769717	2770697	R	cytoplasmic protein; hypothetical protein	complement(2769717..2770697)	Mycobacterium ulcerans Agy99	4550261
YP_906297.1	CDS	MUL_2481	NC_008611.1	2770814	2771575	R	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short-chain type dehydrogenase/reductase	complement(2770814..2771575)	Mycobacterium ulcerans Agy99	4550262
YP_906298.1	CDS	MUL_2482	NC_008611.1	2771677	2772279	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(2771677..2772279)	Mycobacterium ulcerans Agy99	4550263
YP_906299.1	CDS	MUL_2483	NC_008611.1	2772324	2773460	D	cytoplasmic protein; hypothetical protein	2772324..2773460	Mycobacterium ulcerans Agy99	4550264
YP_906300.1	CDS	MUL_2484	NC_008611.1	2773460	2774584	D	cytoplasmic protein; hypothetical protein	2773460..2774584	Mycobacterium ulcerans Agy99	4550265
YP_906301.1	CDS	MUL_2485	NC_008611.1	2774738	2776912	D	PE_PGRS9; membrane protein; PE-PGRS family protein	2774738..2776912	Mycobacterium ulcerans Agy99	4550266
YP_906302.1	CDS	MUL_2486	NC_008611.1	2776974	2777972	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(2776974..2777972)	Mycobacterium ulcerans Agy99	4550267
YP_906303.1	CDS	aofH	NC_008611.1	2778076	2779422	D	cytoplasmic protein; may catalyze the oxidative deamination: oxidize on primary amines, and perhaps on secondary and tertiary amines [catalytic activity: RCH(2)NH(2) + H(2)O + O(2) = RchO + NH(3) + H(2)O(2)] may have important function in metabolism. supposed involved; flavin-containing monoamine oxidase AofH	2778076..2779422	Mycobacterium ulcerans Agy99	4550268
YP_906304.1	CDS	hpx	NC_008611.1	2779417	2780397	R	cytoplasmic protein; supposed involved in detoxification reactions.; non-heme haloperoxidase Hpx	complement(2779417..2780397)	Mycobacterium ulcerans Agy99	4550269
YP_906305.1	CDS	MUL_2489	NC_008611.1	2780638	2781948	D	cytoplasmic protein; possibly catalyzes the oxidative deamination: oxidize on primary amines, and perhaps on secondary and tertiary amines [catalytic activity: RCH(2)NH(2) + H(2)O + O(2) = RchO + NH(3) + H(2)O(2)]; monoamine oxidase	2780638..2781948	Mycobacterium ulcerans Agy99	4550270
YP_906306.1	CDS	MUL_5120	NC_008611.1	2781959	2782363	R	cytoplasmic protein; hypothetical protein	complement(2781959..2782363)	Mycobacterium ulcerans Agy99	4550271
YP_906307.1	CDS	MUL_2490	NC_008611.1	2782433	2782810	R	cytoplasmic protein; hypothetical protein	complement(2782433..2782810)	Mycobacterium ulcerans Agy99	4550272
YP_906308.1	CDS	MUL_2491	NC_008611.1	2782951	2783592	R	cytoplasmic protein; hypothetical protein	complement(2782951..2783592)	Mycobacterium ulcerans Agy99	4550273
YP_906309.1	CDS	MUL_5082	NC_008611.1	2783690	2783923	R	cytoplasmic protein; hypothetical protein	complement(2783690..2783923)	Mycobacterium ulcerans Agy99	4550274
YP_906310.1	CDS	MUL_2493	NC_008611.1	2784053	2784571	R	cytoplasmic protein; hypothetical protein	complement(2784053..2784571)	Mycobacterium ulcerans Agy99	4550275
YP_906311.1	CDS	gltA1	NC_008611.1	2784932	2786065	R	catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase	complement(2784932..2786065)	Mycobacterium ulcerans Agy99	4550276
YP_906312.1	CDS	MUL_2496	NC_008611.1	2786978	2788567	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; hypothetical protein	complement(2786978..2788567)	Mycobacterium ulcerans Agy99	4550278
YP_906313.1	CDS	MUL_2497	NC_008611.1	2788573	2790024	D	cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein	2788573..2790024	Mycobacterium ulcerans Agy99	4550243
YP_906314.1	CDS	MUL_2498	NC_008611.1	2790075	2791010	R	cytoplasmic protein; hypothetical protein	complement(2790075..2791010)	Mycobacterium ulcerans Agy99	4550244
YP_906315.1	CDS	MUL_2499	NC_008611.1	2791007	2791561	R	cytoplasmic protein; hypothetical protein	complement(2791007..2791561)	Mycobacterium ulcerans Agy99	4550245
YP_906316.1	CDS	atsD_1	NC_008611.1	2791573	2793708	R	cytoplasmic protein; thought to play an important role in the mineralization of sulfates [catalytic activity: a phenol sulfate + H2O = a phenol + sulfate]; arylsulfatase AtsD	complement(2791573..2793708)	Mycobacterium ulcerans Agy99	4550246
YP_906317.1	CDS	MUL_2502	NC_008611.1	2794174	2794548	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, possible role in posttranslational modification, protein turnover, chaperonefunctions; FK-506 binding protein, peptidyl-prolyl cis- trans isomerase	complement(2794174..2794548)	Mycobacterium ulcerans Agy99	4550247
YP_906318.1	CDS	MUL_2504	NC_008611.1	2795113	2796126	D	cytoplasmic protein; hypothetical protein	2795113..2796126	Mycobacterium ulcerans Agy99	4550249
YP_906319.1	CDS	MUL_2505	NC_008611.1	2796271	2799258	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(2796271..2799258)	Mycobacterium ulcerans Agy99	4550250
YP_906320.1	CDS	MUL_2506	NC_008611.1	2799380	2800402	R	secreted protein; serine protease	complement(2799380..2800402)	Mycobacterium ulcerans Agy99	4550251
YP_906321.1	CDS	MUL_2507	NC_008611.1	2800481	2801899	D	cytoplasmic protein; hypothetical protein	2800481..2801899	Mycobacterium ulcerans Agy99	4550252
YP_906322.1	CDS	MUL_2508	NC_008611.1	2801938	2802777	D	cytoplasmic protein; hypothetical protein	2801938..2802777	Mycobacterium ulcerans Agy99	4550253
YP_906323.1	CDS	MUL_2509	NC_008611.1	2802797	2803015	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(2802797..2803015)	Mycobacterium ulcerans Agy99	4550254
YP_906324.1	CDS	MUL_2510	NC_008611.1	2803162	2804505	D	thought to be involved in active transport across the membrane. responsible for energy coupling to the transport system.; ABC transporter ATP-binding protein	2803162..2804505	Mycobacterium ulcerans Agy99	4550255
YP_906325.1	CDS	whiB7	NC_008611.1	2804608	2804871	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein Whib-like WhiB7	complement(2804608..2804871)	Mycobacterium ulcerans Agy99	4550256
YP_906326.1	CDS	uvrD2	NC_008611.1	2805302	2807401	R	cytoplasmic protein; involved in nucleotide excision repair. has both ATPase and helicase activities. unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single- stranded region is present. involved in the postincision events of nucleotide excision repair and methyl-directed mismatch repair.; ATP-dependent DNA helicase II UvrD2	complement(2805302..2807401)	Mycobacterium ulcerans Agy99	4550257
YP_906327.1	CDS	MUL_2513	NC_008611.1	2807557	2807811	D	cytoplasmic protein; glutaredoxin protein	2807557..2807811	Mycobacterium ulcerans Agy99	4550258
YP_906328.1	CDS	MUL_2514	NC_008611.1	2807777	2808823	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2807777..2808823)	Mycobacterium ulcerans Agy99	4550259
YP_906329.1	CDS	MUL_2515	NC_008611.1	2809234	2810622	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	2809234..2810622	Mycobacterium ulcerans Agy99	4550155
YP_906330.1	CDS	MUL_2516	NC_008611.1	2810693	2811757	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(2810693..2811757)	Mycobacterium ulcerans Agy99	4550156
YP_906331.1	CDS	lpqQ	NC_008611.1	2812222	2813031	D	membrane protein; lipoprotein LpqQ	2812222..2813031	Mycobacterium ulcerans Agy99	4550157
YP_906332.1	CDS	nudC	NC_008611.1	2813035	2813973	R	can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase	complement(2813035..2813973)	Mycobacterium ulcerans Agy99	4550158
YP_906333.1	CDS	MUL_2519	NC_008611.1	2813963	2815141	R	membrane protein; thought to be involved in cation transport across the membrane.; transmembrane cation transporter	complement(2813963..2815141)	Mycobacterium ulcerans Agy99	4550159
YP_906334.1	CDS	MUL_2520	NC_008611.1	2815203	2818508	R	Detected in the membrane fraction by proteomics.; membrane protein; has both ATPase and helicase activities; ATP-dependent DNA helicase	complement(2815203..2818508)	Mycobacterium ulcerans Agy99	4550160
YP_906335.1	CDS	MUL_2521	NC_008611.1	2818505	2821678	R	membrane protein; has both ATPase and helicase activities; ATP-dependent DNA helicase	complement(2818505..2821678)	Mycobacterium ulcerans Agy99	4550161
YP_906336.1	CDS	MUL_2522	NC_008611.1	2821824	2822666	R	membrane protein; hypothetical protein	complement(2821824..2822666)	Mycobacterium ulcerans Agy99	4550162
YP_906337.1	CDS	MUL_2523	NC_008611.1	2822812	2823057	D	cytoplasmic protein; hypothetical protein	2822812..2823057	Mycobacterium ulcerans Agy99	4550163
YP_906338.1	CDS	lipV	NC_008611.1	2823122	2823907	D	function unknown, presumed lipolytic enzyme involved in cellular metabolism.; lipase LipV	2823122..2823907	Mycobacterium ulcerans Agy99	4550164
YP_906339.1	CDS	MUL_2525	NC_008611.1	2823910	2824218	D	cytoplasmic protein; causes methylation of DNA.; DNA-methyltransferase (modification methylase)	2823910..2824218	Mycobacterium ulcerans Agy99	4550165
YP_906340.1	CDS	MUL_2526	NC_008611.1	2824215	2825129	R	cytoplasmic protein; hypothetical protein	complement(2824215..2825129)	Mycobacterium ulcerans Agy99	4550166
YP_906341.1	CDS	moeB1	NC_008611.1	2825135	2826316	R	The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; molybdopterin biosynthesis-like protein MoeZ	complement(2825135..2826316)	Mycobacterium ulcerans Agy99	4550167
YP_906342.1	CDS	MUL_2528	NC_008611.1	2826488	2827471	R	hypothetical protein	complement(2826488..2827471)	Mycobacterium ulcerans Agy99	4550168
YP_906343.1	CDS	MUL_2529	NC_008611.1	2827699	2828382	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	2827699..2828382	Mycobacterium ulcerans Agy99	4550169
YP_906344.1	CDS	MUL_2530	NC_008611.1	2828379	2828624	R	Detected in the cytoplamic fraction by LC-MS/MS. Also detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; hypothetical protein	complement(2828379..2828624)	Mycobacterium ulcerans Agy99	4550170
YP_906345.1	CDS	MUL_2531	NC_008611.1	2829066	2829620	D	membrane protein; putative threonine and proline rich protein	2829066..2829620	Mycobacterium ulcerans Agy99	4550171
YP_906346.1	CDS	MUL_2532	NC_008611.1	2829633	2830328	R	cytoplasmic protein; hypothetical protein	complement(2829633..2830328)	Mycobacterium ulcerans Agy99	4550172
YP_906347.1	CDS	rhlE	NC_008611.1	2830591	2832144	D	cytoplasmic protein; has a helix-destabilizing activity; ATP-dependent RNA helicase RhlE	2830591..2832144	Mycobacterium ulcerans Agy99	4550061
YP_906348.1	CDS	MUL_2534	NC_008611.1	2832159	2833373	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	2832159..2833373	Mycobacterium ulcerans Agy99	4550062
YP_906349.1	CDS	MUL_2535	NC_008611.1	2833396	2834196	R	cytoplasmic protein; possibly involved in control of chromosome partitioning.; Soj/ParA-related protein	complement(2833396..2834196)	Mycobacterium ulcerans Agy99	4550063
YP_906350.1	CDS	gpm2	NC_008611.1	2834198	2834872	D	forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily; acid phosphatase	2834198..2834872	Mycobacterium ulcerans Agy99	4550064
YP_906351.1	CDS	entC	NC_008611.1	2834869	2835969	D	cytoplasmic protein; could be involved in enterobactin biosynthesis. enterobactin is an iron-chelating compound involved in transporting iron from the bacterial environment into the cell cytoplasm. could be also involved in 2,3- dihydroxybenzoate or enterochelin or menaquinone biosynthesis [catalytic activity: chorismate = isochorismate]; isochorismate synthase EntC	2834869..2835969	Mycobacterium ulcerans Agy99	4550065
YP_906352.1	CDS	MUL_2538	NC_008611.1	2835966	2836448	D	cytoplasmic protein; function unknown, involved in cellular metabolism.; acetyltransferase	2835966..2836448	Mycobacterium ulcerans Agy99	4550066
YP_906353.1	CDS	MUL_2539	NC_008611.1	2836400	2836831	R	membrane protein; hypothetical protein	complement(2836400..2836831)	Mycobacterium ulcerans Agy99	4550067
YP_906354.1	CDS	MUL_2540	NC_008611.1	2836956	2837921	D	cytoplasmic protein; hypothetical protein	2836956..2837921	Mycobacterium ulcerans Agy99	4550068
YP_906355.1	CDS	whiB1	NC_008611.1	2838205	2838459	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein Whib-like WhiB1	2838205..2838459	Mycobacterium ulcerans Agy99	4550069
YP_906356.1	CDS	MUL_2542	NC_008611.1	2838522	2840021	R	membrane protein; sensor part of a two component regulatory system.; sensor kinase from two component regulatory system	complement(2838522..2840021)	Mycobacterium ulcerans Agy99	4550070
YP_906357.1	CDS	MUL_2543	NC_008611.1	2840071	2840535	R	cytoplasmic protein; hypothetical protein	complement(2840071..2840535)	Mycobacterium ulcerans Agy99	4550071
YP_906358.1	CDS	MUL_2544	NC_008611.1	2840648	2840953	R	cytoplasmic protein; binds sigma factor and inhibits it. probably involved in survival following heat shock and oxidative stress.; anti-sigma factor	complement(2840648..2840953)	Mycobacterium ulcerans Agy99	4550072
YP_906359.1	CDS	sigH	NC_008611.1	2840950	2841600	R	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE	complement(2840950..2841600)	Mycobacterium ulcerans Agy99	4550073
YP_906360.1	CDS	MUL_2546	NC_008611.1	2841917	2842765	D	Detected in the cytoplamic fraction by LC-MS/MS. Also detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; function unknown, probably involved in cellular metabolism.; short chain dehydrogenase	2841917..2842765	Mycobacterium ulcerans Agy99	4550074
YP_906361.1	CDS	MUL_2547	NC_008611.1	2842901	2843236	D	membrane protein; hypothetical protein	2842901..2843236	Mycobacterium ulcerans Agy99	4550075
YP_906362.1	CDS	MUL_2549	NC_008611.1	2845567	2845914	R	cytoplasmic protein; hypothetical protein	complement(2845567..2845914)	Mycobacterium ulcerans Agy99	4550077
YP_906363.1	CDS	MUL_2550	NC_008611.1	2845911	2847431	R	cytoplasmic protein; hypothetical protein	complement(2845911..2847431)	Mycobacterium ulcerans Agy99	4550078
YP_906364.1	CDS	MUL_2551	NC_008611.1	2847510	2848106	R	cytoplasmic protein; hypothetical protein	complement(2847510..2848106)	Mycobacterium ulcerans Agy99	4550079
YP_906365.1	CDS	MUL_2552	NC_008611.1	2848329	2848718	R	cytoplasmic protein; hypothetical protein	complement(2848329..2848718)	Mycobacterium ulcerans Agy99	4550080
YP_906366.1	CDS	MUL_2553	NC_008611.1	2849026	2849340	R	hypothetical protein	complement(2849026..2849340)	Mycobacterium ulcerans Agy99	4550042
YP_906367.1	CDS	MUL_2554	NC_008611.1	2849416	2850714	R	membrane protein; hypothetical protein	complement(2849416..2850714)	Mycobacterium ulcerans Agy99	4550043
YP_906368.1	CDS	MUL_2555	NC_008611.1	2851502	2853409	R	membrane protein; may be involved in regulation; hypothetical protein	complement(2851502..2853409)	Mycobacterium ulcerans Agy99	4550044
YP_906369.1	CDS	MUL_2556	NC_008611.1	2853419	2853742	R	cytoplasmic protein; hypothetical protein	complement(2853419..2853742)	Mycobacterium ulcerans Agy99	4550045
YP_906370.1	CDS	MUL_2557	NC_008611.1	2853847	2855064	R	hypothetical protein	complement(2853847..2855064)	Mycobacterium ulcerans Agy99	4550046
YP_906371.1	CDS	fadB3	NC_008611.1	2855189	2856073	R	cytoplasmic protein; thought to be involved in fatty acid degradation. FadB and FadA are the alpha and BetA subunits of the multifunctional enzyme complex of the fatty acid degradation cycle [catalytic activity: (S)-3- hydroxybutanoyl-CoA + NADP+ = 3-acetoacetyl-CoA + NADPH]; 3-hydroxybutyryl-CoA dehydrogenase FadB3	complement(2855189..2856073)	Mycobacterium ulcerans Agy99	4550047
YP_906372.1	CDS	MUL_2559	NC_008611.1	2856171	2856944	R	cytoplasmic protein; hypothetical protein	complement(2856171..2856944)	Mycobacterium ulcerans Agy99	4550048
YP_906373.1	CDS	aroA	NC_008611.1	2856999	2858294	D	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase	2856999..2858294	Mycobacterium ulcerans Agy99	4550049
YP_906374.1	CDS	MUL_2561	NC_008611.1	2858291	2859283	D	cytoplasmic protein; hypothetical protein	2858291..2859283	Mycobacterium ulcerans Agy99	4550050
YP_906375.1	CDS	MUL_2562	NC_008611.1	2859270	2859737	R	cytoplasmic protein; function unknown. could be involved in regulatory mechanism.; transcriptional regulatory protein	complement(2859270..2859737)	Mycobacterium ulcerans Agy99	4550051
YP_906376.1	CDS	fadA6_4	NC_008611.1	2859832	2861013	D	cytoplasmic protein; function unknown, but involved in lipid metabolism [catalytic activity: 2 acetyl-CoA = CoA + acetoacetyl- CoA]; acetyl-CoA acetyltransferase FadA6_4	2859832..2861013	Mycobacterium ulcerans Agy99	4550052
YP_906377.1	CDS	desA3_1	NC_008611.1	2861051	2862337	R	cytoplasmic protein; thought to be involved in lipid metabolism [catalytic activity: linoleoyl-CoA + ah(2) + O(2) = gamma- linolenoyl-CoA + a + 2 H(2)O]; linoleoyl-CoA desaturase, DesA3	complement(2861051..2862337)	Mycobacterium ulcerans Agy99	4550053
YP_906378.1	CDS	desA3	NC_008611.1	2862565	2863851	R	cytoplasmic protein; thought to be involved in lipid metabolism [catalytic activity: linoleoyl-CoA + ah(2) + O(2) = gamma- linolenoyl-CoA + a + 2 H(2)O]; linoleoyl-CoA desaturase, DesA3	complement(2862565..2863851)	Mycobacterium ulcerans Agy99	4550054
YP_906379.1	CDS	MUL_2566	NC_008611.1	2863940	2865094	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(2863940..2865094)	Mycobacterium ulcerans Agy99	4550055
YP_906380.1	CDS	MUL_2567	NC_008611.1	2865235	2865735	R	cytoplasmic protein; hypothetical protein	complement(2865235..2865735)	Mycobacterium ulcerans Agy99	4550056
YP_906381.1	CDS	pvdS	NC_008611.1	2865801	2866673	R	cytoplasmic protein; possibly involved in transcriptional mechanism (probably sigma factor promoting attachment of the RNA polymerase to specific initiation sites); transcriptional regulatory protein PvdS	complement(2865801..2866673)	Mycobacterium ulcerans Agy99	4550057
YP_906382.1	CDS	MUL_2572	NC_008611.1	2868896	2870041	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; probably involved in transport of undeterminated substrate (possibly cations Na/H) across the membrane. thought to be responsible for the translocation of the substrate across the membrane.; membrane transporter	complement(2868896..2870041)	Mycobacterium ulcerans Agy99	4550060
YP_906383.1	CDS	MUL_2573	NC_008611.1	2870046	2870528	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown but has a putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [inorganic ion transport and metabolism]; hypothetical protein	complement(2870046..2870528)	Mycobacterium ulcerans Agy99	4550026
YP_906384.1	CDS	MUL_2574	NC_008611.1	2870657	2871403	R	membrane protein; hypothetical protein	complement(2870657..2871403)	Mycobacterium ulcerans Agy99	4550027
YP_906385.1	CDS	secA1	NC_008611.1	2874774	2877626	R	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA	complement(2874774..2877626)	Mycobacterium ulcerans Agy99	4550029
YP_906386.1	CDS	MUL_2577	NC_008611.1	2877723	2878412	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown but has domain identity with sigma 54 modulation protein; hypothetical protein	complement(2877723..2878412)	Mycobacterium ulcerans Agy99	4550030
YP_906387.1	CDS	MUL_2578	NC_008611.1	2878759	2879394	R	cytoplasmic protein; function unknown, but contains amidophosphoribosyltransferase domain; hypothetical protein	complement(2878759..2879394)	Mycobacterium ulcerans Agy99	4550031
YP_906388.1	CDS	MUL_2579	NC_008611.1	2879437	2880267	R	membrane protein; hypothetical protein	complement(2879437..2880267)	Mycobacterium ulcerans Agy99	4550032
YP_906389.1	CDS	lpqB	NC_008611.1	2880328	2882088	R	membrane protein; lipoprotein LpqB	complement(2880328..2882088)	Mycobacterium ulcerans Agy99	4550033
YP_906390.1	CDS	mtrB	NC_008611.1	2882106	2883785	R	membrane protein; sensor part of a two component regulatory system.; two component sensory transduction histidine kinase MtrB	complement(2882106..2883785)	Mycobacterium ulcerans Agy99	4550034
YP_906391.1	CDS	mtrA	NC_008611.1	2883835	2884521	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics.; cytoplasmic protein; transcriptional activator part of a two component regulatory system.; two component sensory transduction transcriptional regulatory protein MtrA	complement(2883835..2884521)	Mycobacterium ulcerans Agy99	4550035
YP_906392.1	CDS	tmk	NC_008611.1	2884576	2885244	R	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase	complement(2884576..2885244)	Mycobacterium ulcerans Agy99	4550036
YP_906393.1	CDS	MUL_2585	NC_008611.1	2886621	2887667	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2886621..2887667	Mycobacterium ulcerans Agy99	4550038
YP_906394.1	CDS	MUL_2587	NC_008611.1	2889049	2890095	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	2889049..2890095	Mycobacterium ulcerans Agy99	4550039
YP_906395.1	CDS	sahH	NC_008611.1	2892768	2894246	R	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase	complement(2892768..2894246)	Mycobacterium ulcerans Agy99	4549868
YP_906396.1	CDS	MUL_2593	NC_008611.1	2894351	2895058	R	cytoplasmic protein; probably involved in a transcriptional mechanism; TetR family transcriptional regulator	complement(2894351..2895058)	Mycobacterium ulcerans Agy99	4549869
YP_906397.1	CDS	rubB	NC_008611.1	2894998	2895180	R	cytoplasmic protein; involved in the hydrocarbon hydroxylating system to convert conversion of dodecane to lauric acid, which transfers electrons from NADH to rubredoxin reductase and then through rubredoxin to alkane 1 monooxygenase.; rubredoxin RubB	complement(2894998..2895180)	Mycobacterium ulcerans Agy99	4549870
YP_906398.1	CDS	rubA	NC_008611.1	2895181	2895351	R	cytoplasmic protein; involved in the hydrocarbon hydroxylating system, which transfers electrons from NADH to rubredoxin reductase and then through rubredoxin to alkane 1 monooxygenase.; rubredoxin RubA	complement(2895181..2895351)	Mycobacterium ulcerans Agy99	4549871
YP_906399.1	CDS	MUL_2597	NC_008611.1	2896591	2898075	R	membrane protein; thought to be involved in cationic amino acid transport across the membrane. responsible for the translocation of the substrate across the membrane.; cationic amino acid transport integral membrane protein	complement(2896591..2898075)	Mycobacterium ulcerans Agy99	4549873
YP_906400.1	CDS	MUL_2598	NC_008611.1	2898132	2899526	D	hypothetical protein	2898132..2899526	Mycobacterium ulcerans Agy99	4549874
YP_906401.1	CDS	MUL_2599	NC_008611.1	2899569	2900975	D	cytoplasmic protein; function unknown but contains dehydrogenase domain; hypothetical protein	2899569..2900975	Mycobacterium ulcerans Agy99	4549875
YP_906402.1	CDS	manA	NC_008611.1	2900953	2902179	R	cytoplasmic protein; this enzyme converts D-mannose 6-phosphate to D- fructose 6-phosphate [catalytic activity: D-mannose 6- phosphate = D-fructose 6-phosphate]; mannose-6-phosphate isomerase ManA	complement(2900953..2902179)	Mycobacterium ulcerans Agy99	4549876
YP_906403.1	CDS	MUL_2601	NC_008611.1	2902187	2903296	R	cytoplasmic protein; hypothetical protein	complement(2902187..2903296)	Mycobacterium ulcerans Agy99	4549877
YP_906404.1	CDS	manB	NC_008611.1	2903293	2904693	R	converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells; phosphomannomutase	complement(2903293..2904693)	Mycobacterium ulcerans Agy99	4549878
YP_906405.1	CDS	MUL_2603	NC_008611.1	2904840	2905337	R	cytoplasmic protein; hypothetical protein	complement(2904840..2905337)	Mycobacterium ulcerans Agy99	4549879
YP_906406.1	CDS	MUL_2604	NC_008611.1	2905352	2905882	D	cytoplasmic protein; hypothetical protein	2905352..2905882	Mycobacterium ulcerans Agy99	4549880
YP_906407.1	CDS	whiB2	NC_008611.1	2905948	2906331	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein Whib-like WhiB2	complement(2905948..2906331)	Mycobacterium ulcerans Agy99	4549881
YP_906408.1	CDS	fbiA	NC_008611.1	2906724	2907713	D	catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); LPPG:FO 2-phospho-L-lactate transferase	2906724..2907713	Mycobacterium ulcerans Agy99	4549882
YP_906409.1	CDS	fbiB	NC_008611.1	2907710	2909074	D	catalyzes the addition of gamma linked glutamate to 7,8-didemethyl-8-hydroxy-5-deazariboflavin coenzyme F420-0); F420-0--gamma-glutamyl ligase	2907710..2909074	Mycobacterium ulcerans Agy99	4549883
YP_906410.1	CDS	MUL_2608	NC_008611.1	2909103	2910689	D	cytoplasmic protein; causes DNA methylation.; DNA methylase	2909103..2910689	Mycobacterium ulcerans Agy99	4549884
YP_906411.1	CDS	MUL_2609	NC_008611.1	2910728	2911234	D	cytoplasmic protein; hypothetical protein	2910728..2911234	Mycobacterium ulcerans Agy99	4549885
YP_906412.1	CDS	manB	NC_008611.1	2911263	2912339	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in GDP-mannose biosynthesis and biosynthesis of nucleotide-activated glycero-manno-heptose (D-alpha-D pathway): generates GDP-mannose and phosphate from GTP and alpha-D-mannose 1-phosphate. ManB product is needed for all mannosyl glycolipids and polysaccharides which, like rhamnosyl residues, are an important part of the mycobacterium envelope [catalytic activity: alpha-D- mannose 1-phosphate + GTP = GDP-mannose + phosphate]; d-alpha-D-mannose-1-phosphate guanylyltransferase ManB	complement(2911263..2912339)	Mycobacterium ulcerans Agy99	4549886
YP_906413.1	CDS	wbbL1	NC_008611.1	2912341	2913225	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in cell wall arabinogalactan linker formation: uses dTDP-L-rhamnose as substrate to insert the rhamnosyl residue into the cell wall. seems to be essential for mycobacterial viability.; dTDP-rha:A-D-GlcNAc-diphosphoryl polyprenol A-3- L-rhamnosyl transferase, WbbL1	complement(2912341..2913225)	Mycobacterium ulcerans Agy99	4549849
YP_906414.1	CDS	rmlD	NC_008611.1	2913218	2914144	R	cytoplasmic protein; involved in dTDP-L-rhamnose biosynthesis: converts dTDP-6-deoxy-L-lyxo-4-hexulose to dTDP-L-rhamnose with the concomitant oxidation of NADPH to NADP+ [catalytic activity: dTDP-6-deoxy-L-lyxo-4-hexulose + NADPH = dTDP-L- rhamnose + NADP+]; dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD	complement(2913218..2914144)	Mycobacterium ulcerans Agy99	4549850
YP_906415.1	CDS	MUL_2613	NC_008611.1	2914209	2915669	D	membrane protein; hypothetical protein	2914209..2915669	Mycobacterium ulcerans Agy99	4549851
YP_906416.1	CDS	MUL_2614	NC_008611.1	2915699	2916379	D	hypothetical protein	2915699..2916379	Mycobacterium ulcerans Agy99	4549852
YP_906417.1	CDS	MUL_2615	NC_008611.1	2916495	2916773	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown.; hypothetical protein	2916495..2916773	Mycobacterium ulcerans Agy99	4549853
YP_906418.1	CDS	ctpC	NC_008611.1	2916783	2918981	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; metal cation-transporting ATPase; possibly catalyzes the transport of undetermined metal cation with the hydrolyse of ATP [catalytic activity: ATP + H(2)O + undeterminated metal cation(in) = ADP + phosphate + undeterminated metal cation(out)]; metal cation-transporting p-type ATPase CtpC	2916783..2918981	Mycobacterium ulcerans Agy99	4549854
YP_906419.1	CDS	MUL_2617	NC_008611.1	2919025	2919726	R	cytoplasmic protein; hypothetical protein	complement(2919025..2919726)	Mycobacterium ulcerans Agy99	4549855
YP_906420.1	CDS	MUL_2620	NC_008611.1	2921595	2922341	D	cytoplasmic protein; function unknown, potential regulatory function; hypothetical protein	2921595..2922341	Mycobacterium ulcerans Agy99	4549857
YP_906421.1	CDS	MUL_2621	NC_008611.1	2922436	2923623	D	cytoplasmic protein; acyl-CoA transferase	2922436..2923623	Mycobacterium ulcerans Agy99	4549858
YP_906422.1	CDS	MUL_2623	NC_008611.1	2926160	2926600	R	membrane protein; sensor part of the two component regulatory system.; two component transcriptional regulator	complement(2926160..2926600)	Mycobacterium ulcerans Agy99	4549860
YP_906423.1	CDS	MUL_2624	NC_008611.1	2926597	2928219	R	membrane protein; two component system membrane associated sensor kinase	complement(2926597..2928219)	Mycobacterium ulcerans Agy99	4549861
YP_906424.1	CDS	MUL_2625	NC_008611.1	2928216	2929454	R	cytoplasmic protein; hypothetical protein	complement(2928216..2929454)	Mycobacterium ulcerans Agy99	4549862
YP_906425.1	CDS	fadE25	NC_008611.1	2929648	2930817	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, but involved in lipid metabolism [catalytic activity: acyl-CoA + ETF = 2,3-dehydroacyl-CoA + reduced ETF]; acyl-CoA dehydrogenase FadE25	complement(2929648..2930817)	Mycobacterium ulcerans Agy99	4549863
YP_906426.1	CDS	purE	NC_008611.1	2930842	2931357	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; nvolved in purine biosynthesis (sixth step) this subunit can alone transform air to cair, but in association with PurK, which possesses an ATPase activity, an enzyme complex is produced which is capable of converting air to cair efficiently under physiol; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE	complement(2930842..2931357)	Mycobacterium ulcerans Agy99	4549864
YP_906427.1	CDS	purK	NC_008611.1	2931350	2932624	R	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit	complement(2931350..2932624)	Mycobacterium ulcerans Agy99	4549865
YP_906428.1	CDS	MUL_2629	NC_008611.1	2932664	2933347	D	membrane protein; hypothetical protein	2932664..2933347	Mycobacterium ulcerans Agy99	4549866
YP_906429.1	CDS	MUL_2630	NC_008611.1	2933302	2933820	R	membrane protein; hypothetical protein	complement(2933302..2933820)	Mycobacterium ulcerans Agy99	4549867
YP_906430.1	CDS	birA	NC_008611.1	2933883	2934713	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; BirA acts both as a biotin-operon repressor and as the enzyme that synthesizes the corepressor, acetyl- CoA:carbon-dioxide ligase. this protein also activates biotin to form biotinyl-5'-adenylate and transfers the biotin moiety to biotin-accepting proteins [catalytic activity: ATP + biotin + apo-[acetyl-CoA:carbon-dioxide ligase (ADP forming)] = AMP + pyrophosphate + [acetyl- CoA:carbon-dioxide ligase (ADP forming)]]; bifunctional protein BirA	complement(2933883..2934713)	Mycobacterium ulcerans Agy99	4549829
YP_906431.1	CDS	accD5	NC_008611.1	2934864	2936504	D	Detected in the cytoplamic fraction by LC-MS/MS. Also detected in the extracellular matrix  and membrane fraction by proteomics.; cytoplasmic protein; key enzyme in the catabolic pathway of odd-chain fatty acids, isoleucine, threonine, methionine, and valine [catalytic activity: ATP + propionyl-CoA + CO(2) + H(2)O = ADP + orthophosphate + methylmalonyl-CoA]; propionyl-CoA carboxylase beta chain 5 AccD5	2934864..2936504	Mycobacterium ulcerans Agy99	4549830
YP_906432.1	CDS	MUL_2633	NC_008611.1	2936501	2936821	D	cytoplasmic protein; hypothetical protein	2936501..2936821	Mycobacterium ulcerans Agy99	4549831
YP_906433.1	CDS	MUL_2634	NC_008611.1	2936818	2937468	D	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein	2936818..2937468	Mycobacterium ulcerans Agy99	4549832
YP_906434.1	CDS	sseA	NC_008611.1	2937508	2938413	D	cytoplasmic protein; possibly a sulfotransferase involved in the formation of thiosulfate [catalytic activity: thiosulfate + cyanide = sulfite + thiocyanate]; thiosulfate sulfurtransferase SseA	2937508..2938413	Mycobacterium ulcerans Agy99	4549833
YP_906435.1	CDS	sufE	NC_008611.1	2938410	2938829	D	cytoplasmic protein; probably involved in Fe-S center assembly; Fe-S metabolism associated protein, SufE	2938410..2938829	Mycobacterium ulcerans Agy99	4549834
YP_906436.1	CDS	accA3	NC_008611.1	2938940	2940733	D	Detected in the cytoplasmic fraction by proteomics (2D-LC-MS/MS) Also detected in the extracellular matrix and membrane fraction by proteomics.; cytoplasmic protein; involved in long-chain fatty acid synthesis (at the first step) carries two functions: biotin carboxyl carrier protein and biotin carboxyltransferase [catalytic activity: ATP + biotin-carboxyl-carrier protein + CO(2) = ADP + orthophosphate + carboxybiotin-carboxyl-carrier protein]; bifunctional protein acetyl-/propionyl-coenzyme a carboxylase (alpha chain) AccA3	2938940..2940733	Mycobacterium ulcerans Agy99	4549835
YP_906437.1	CDS	MUL_2638	NC_008611.1	2940775	2950209	R	cytoplasmic protein; function unknown but contains 3 modules for the potential synthesis of a tripeptide; peptide synthetase Nrp (peptide synthase)	complement(2940775..2950209)	Mycobacterium ulcerans Agy99	4549836
YP_906438.1	CDS	MUL_2639	NC_008611.1	2950837	2951406	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	2950837..2951406	Mycobacterium ulcerans Agy99	4549837
YP_906439.1	CDS	sigF	NC_008611.1	2951468	2952256	R	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is a general stress response regulator; expressed in stationary phase and under nitrogen depletion and cold shock; RNA polymerase sigma factor SigF	complement(2951468..2952256)	Mycobacterium ulcerans Agy99	4549838
YP_906440.1	CDS	rsbW	NC_008611.1	2952253	2952690	R	cytoplasmic protein; binds to sigma and blocks its ability to form an RNA polymerase holoenzyme. regulates negatively SigF and negatively regulated by RsfA and RsfB.; anti-sigma factor RsbW	complement(2952253..2952690)	Mycobacterium ulcerans Agy99	4549839
YP_906441.1	CDS	MUL_5106	NC_008611.1	2952768	2952980	R	cytoplasmic protein; hypothetical protein	complement(2952768..2952980)	Mycobacterium ulcerans Agy99	4549840
YP_906442.1	CDS	usfY	NC_008611.1	2953173	2953484	R	cytoplasmic protein; hypothetical protein	complement(2953173..2953484)	Mycobacterium ulcerans Agy99	4549841
YP_906443.1	CDS	MUL_2643	NC_008611.1	2953597	2953983	R	membrane protein; hypothetical protein	complement(2953597..2953983)	Mycobacterium ulcerans Agy99	4549842
YP_906444.1	CDS	lat	NC_008611.1	2954063	2955403	R	catalyzes the formation of 2-aminoadipate 6-semiladehyde and glutamate from lysine and 2-oxoglutarate; L-lysine aminotransferase	complement(2954063..2955403)	Mycobacterium ulcerans Agy99	4549843
YP_906445.1	CDS	MUL_2645	NC_008611.1	2955457	2955909	R	cytoplasmic protein; involved in transcriptional mechanism.; AsnC family transcriptional regulator	complement(2955457..2955909)	Mycobacterium ulcerans Agy99	4549844
YP_906446.1	CDS	MUL_2646	NC_008611.1	2955943	2957214	D	cytoplasmic protein; hypothetical protein	2955943..2957214	Mycobacterium ulcerans Agy99	4549845
YP_906447.1	CDS	pcd	NC_008611.1	2957292	2958806	D	cytoplasmic protein; involved in L-alpha-aminoadipic acid (L-AAA) biosynthesis (in the second step; the first step is promoted by Lat enzyme.; piperideine-6-carboxilic acid dehydrogenase Pcd	2957292..2958806	Mycobacterium ulcerans Agy99	4549846
YP_906448.1	CDS	MUL_2648	NC_008611.1	2958855	2959529	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	2958855..2959529	Mycobacterium ulcerans Agy99	4549847
YP_906449.1	CDS	nei	NC_008611.1	2964187	2964951	D	cytoplasmic protein; involved in damage reversal. DNA N-glycosylase with an ap lyase activity. required for the repair of oxidative DNA damage (oxidized pyrimidines); endonuclease VIII Nei	2964187..2964951	Mycobacterium ulcerans Agy99	4549775
YP_906450.1	CDS	lpqC	NC_008611.1	2964966	2965883	R	membrane protein; function unknown, lipolytic enzyme involved in cellular metabolism.; esterase lipoprotein LpqC	complement(2964966..2965883)	Mycobacterium ulcerans Agy99	4549776
YP_906451.1	CDS	MUL_2653	NC_008611.1	2966407	2966724	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(2966407..2966724)	Mycobacterium ulcerans Agy99	4549778
YP_906452.1	CDS	MUL_2654	NC_008611.1	2966749	2967453	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(2966749..2967453)	Mycobacterium ulcerans Agy99	4549779
YP_906453.1	CDS	phoS2_1	NC_008611.1	2968550	2969662	R	membrane protein; involved in active transport of inorganic phosphate across the membrane (import) this is one of the proteins required for binding-protein-mediated phosphate transport.; periplasmic phosphate-binding lipoprotein PhoS2	complement(2968550..2969662)	Mycobacterium ulcerans Agy99	4549780
YP_906454.1	CDS	MUL_2657	NC_008611.1	2969740	2970243	D	cytoplasmic protein; hypothetical protein	2969740..2970243	Mycobacterium ulcerans Agy99	4549781
YP_906455.1	CDS	atsB	NC_008611.1	2970265	2973156	R	membrane protein; generates sulfate and phenol from phenol sulfate [catalytic activity: a phenol sulfate + H(2)O = a phenol + sulfate]; arylsulfatase AtsB	complement(2970265..2973156)	Mycobacterium ulcerans Agy99	4549782
YP_906456.1	CDS	MUL_2659	NC_008611.1	2973178	2974044	R	cytoplasmic protein; catalyses the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi); pseudouridine synthase	complement(2973178..2974044)	Mycobacterium ulcerans Agy99	4549783
YP_906457.1	CDS	phoY1	NC_008611.1	2975289	2975954	R	cytoplasmic protein; involved in transcriptional regulation of active transport of inorganic phosphate across the membrane.; phosphate-transport system transcriptional regulatory protein PhoY1	complement(2975289..2975954)	Mycobacterium ulcerans Agy99	4549785
YP_906458.1	CDS	gltB_1	NC_008611.1	2981516	2983060	R	membrane protein; function unknown but may be involved in glutamate biosynthesis [catalytic activity: 2 L-glutamate + NADP(+) = L-glutamine + 2-oxoglutarate + NADPH]; glutamate synthase, GltB	complement(2981516..2983060)	Mycobacterium ulcerans Agy99	4549789
YP_906459.1	CDS	glpD2	NC_008611.1	2983468	2985225	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; involved in aerobic respiration and oxydation of glycerol. reduces an acceptor and generates glycerone phosphate from SN-glycerol 3-phosphate. possibly play a role in metabolism of riboflavin, fad,FMN [catalytic activity: SN-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor]; glycerol-3-phosphate dehydrogenase GlpD2	complement(2983468..2985225)	Mycobacterium ulcerans Agy99	4549790
YP_906460.1	CDS	lpdA	NC_008611.1	2985310	2986722	R	catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity; flavoprotein disulfide reductase	complement(2985310..2986722)	Mycobacterium ulcerans Agy99	4549791
YP_906461.1	CDS	MUL_2669	NC_008611.1	2986864	2987343	D	cytoplasmic protein; hypothetical protein	2986864..2987343	Mycobacterium ulcerans Agy99	4549792
YP_906462.1	CDS	MUL_2670	NC_008611.1	2987435	2988280	R	cytoplasmic protein; hypothetical protein	complement(2987435..2988280)	Mycobacterium ulcerans Agy99	4549758
YP_906463.1	CDS	amiA1	NC_008611.1	2988434	2989603	R	membrane protein; function unknown, hydrolysis of L-amino acids.; N-acyl-L-amino acid amidohydrolase AmiA1	complement(2988434..2989603)	Mycobacterium ulcerans Agy99	4549759
YP_906464.1	CDS	amiB1	NC_008611.1	2989600	2990781	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in cellular metabolism, active on carbon aliphatic amides and/or on many aromatic amides [catalytic activity : a monocarboxylic acid amide + H(2)O = a monocarboxylate + NH(3)]; amidohydrolase	complement(2989600..2990781)	Mycobacterium ulcerans Agy99	4549760
YP_906465.1	CDS	deoD	NC_008611.1	2990864	2991685	D	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase	2990864..2991685	Mycobacterium ulcerans Agy99	4549761
YP_906466.1	CDS	pmmB	NC_008611.1	2991675	2993255	D	cytoplasmic protein; converts D-mannose 1-phosphate to D-mannose 6- phosphate.; phosphomannomutase	2991675..2993255	Mycobacterium ulcerans Agy99	4549762
YP_906467.1	CDS	upp	NC_008611.1	2993257	2993826	R	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase	complement(2993257..2993826)	Mycobacterium ulcerans Agy99	4549763
YP_906468.1	CDS	MUL_2676	NC_008611.1	2994021	2994863	D	cytoplasmic protein; involved in cellular metabolism: acting on ester bonds [catalytic activity: an orthophosphoric monoester + H(2)O = an alcohol + orthophosphate]; acid phosphatase	2994021..2994863	Mycobacterium ulcerans Agy99	4549764
YP_906469.1	CDS	MUL_2677	NC_008611.1	2994912	2996237	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	2994912..2996237	Mycobacterium ulcerans Agy99	4549765
YP_906470.1	CDS	MUL_2678	NC_008611.1	2996294	2997190	R	cytoplasmic protein; function unknown but contains hydrolase domain; hypothetical protein	complement(2996294..2997190)	Mycobacterium ulcerans Agy99	4549766
YP_906471.1	CDS	MUL_2679	NC_008611.1	2997293	2998672	D	cytoplasmic protein; function unknown. thought to be regulated by LexA; 13e12 repeat-containing protein	2997293..2998672	Mycobacterium ulcerans Agy99	4549767
YP_906472.1	CDS	MUL_2680	NC_008611.1	2998872	3000269	D	membrane protein; function unknown but contains permease domain and may be involved in nucleotide transport (cytosine/purines) and metabolism/coenzyme metabolism; hypothetical protein	2998872..3000269	Mycobacterium ulcerans Agy99	4549768
YP_906473.1	CDS	MUL_2681	NC_008611.1	3000377	3001288	R	Detected in the cytoplamic fraction by LCMSMS; cytoplasmic protein; function unknown, contains xylanase/chitin deacetylase domain; chitinase	complement(3000377..3001288)	Mycobacterium ulcerans Agy99	4549769
YP_906474.1	CDS	alc	NC_008611.1	3001285	3002244	R	catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase	complement(3001285..3002244)	Mycobacterium ulcerans Agy99	4549770
YP_906475.1	CDS	MUL_2683	NC_008611.1	3002241	3003539	R	cytoplasmic protein; hypothetical protein	complement(3002241..3003539)	Mycobacterium ulcerans Agy99	4549771
YP_906476.1	CDS	MUL_2685	NC_008611.1	3005342	3006388	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3005342..3006388	Mycobacterium ulcerans Agy99	4549773
YP_906477.1	CDS	MUL_2686	NC_008611.1	3006538	3007185	R	membrane protein; PPE family protein	complement(3006538..3007185)	Mycobacterium ulcerans Agy99	4549774
YP_906478.1	CDS	MUL_2688	NC_008611.1	3008107	3008811	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	3008107..3008811	Mycobacterium ulcerans Agy99	4549689
YP_906479.1	CDS	MUL_2689	NC_008611.1	3008836	3009153	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	3008836..3009153	Mycobacterium ulcerans Agy99	4549690
YP_906480.1	CDS	MUL_2691	NC_008611.1	3010350	3010589	R	cytoplasmic protein; transposition of an insertion sequence; transposase ISMmr01_aa2-like	complement(3010350..3010589)	Mycobacterium ulcerans Agy99	4549691
YP_906481.1	CDS	MUL_2692	NC_008611.1	3010597	3010878	R	cytoplasmic protein; transposition of an insertion sequence; transposase ISMmr01_aa1-like	complement(3010597..3010878)	Mycobacterium ulcerans Agy99	4549692
YP_906482.1	CDS	MUL_2693	NC_008611.1	3011055	3012377	R	cytoplasmic protein; hypothetical protein	complement(3011055..3012377)	Mycobacterium ulcerans Agy99	4549693
YP_906483.1	CDS	pitB	NC_008611.1	3012841	3014460	D	membrane protein; involved in phosphate transport.; phosphate-transport permease PitB	3012841..3014460	Mycobacterium ulcerans Agy99	4549694
YP_906484.1	CDS	cysH_1	NC_008611.1	3016215	3016949	D	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase	3016215..3016949	Mycobacterium ulcerans Agy99	4549696
YP_906485.1	CDS	MUL_2697	NC_008611.1	3016946	3017665	D	cytoplasmic protein; hypothetical protein	3016946..3017665	Mycobacterium ulcerans Agy99	4549697
YP_906486.1	CDS	MUL_2698	NC_008611.1	3017686	3018624	R	cytoplasmic protein; LysR family transcriptional regulator	complement(3017686..3018624)	Mycobacterium ulcerans Agy99	4549698
YP_906487.1	CDS	fprA	NC_008611.1	3018711	3019973	D	secreted protein; generates oxidized ferredoxin from ferredoxin [catalytic activity: reduced ferredoxin + NADP(+) = oxidized ferredoxin + NADPH]; NADPH:adrenodoxin oxidoreductase FprA	3018711..3019973	Mycobacterium ulcerans Agy99	4549699
YP_906488.1	CDS	fdxC_1	NC_008611.1	3020098	3020424	D	cytoplasmic protein; ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.; ferredoxin FdxC	3020098..3020424	Mycobacterium ulcerans Agy99	4549700
YP_906489.1	CDS	MUL_2701	NC_008611.1	3020551	3021144	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; function unknown. possibly involved in transcriptional mechanism.; transcriptional regulatory protein	complement(3020551..3021144)	Mycobacterium ulcerans Agy99	4549701
YP_906490.1	CDS	MUL_2702	NC_008611.1	3021329	3021988	R	membrane protein; PE-PGRS family protein	complement(3021329..3021988)	Mycobacterium ulcerans Agy99	4549702
YP_906491.1	CDS	MUL_2703	NC_008611.1	3022424	3022798	R	cytoplasmic protein; function unknown but contains zinc binding domain found at the N-terminus of the ClpX protein. ClpX is an ATPase which functions both as a substrate specificity component of the ClpXP protease and as a molecular chaperone.; hypothetical protein	complement(3022424..3022798)	Mycobacterium ulcerans Agy99	4549703
YP_906492.1	CDS	lipM	NC_008611.1	3022900	3024162	D	membrane protein; hydrolysis of lipids (bound ester); membrane-bound esterase LipM	3022900..3024162	Mycobacterium ulcerans Agy99	4549704
YP_906493.1	CDS	MUL_2705	NC_008611.1	3024174	3025160	D	cytoplasmic protein; hypothetical protein	3024174..3025160	Mycobacterium ulcerans Agy99	4549705
YP_906494.1	CDS	MUL_2706	NC_008611.1	3025349	3026689	D	hypothetical protein	3025349..3026689	Mycobacterium ulcerans Agy99	4549669
YP_906495.1	CDS	MUL_2707	NC_008611.1	3026722	3027918	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	3026722..3027918	Mycobacterium ulcerans Agy99	4549670
YP_906496.1	CDS	MUL_2708	NC_008611.1	3027924	3028619	R	cytoplasmic protein; hypothetical protein	complement(3027924..3028619)	Mycobacterium ulcerans Agy99	4549671
YP_906497.1	CDS	MUL_2710	NC_008611.1	3028761	3029201	R	membrane protein; hypothetical protein	complement(3028761..3029201)	Mycobacterium ulcerans Agy99	4549672
YP_906498.1	CDS	MUL_2713	NC_008611.1	3031647	3032693	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3031647..3032693	Mycobacterium ulcerans Agy99	4549675
YP_906499.1	CDS	MUL_2714	NC_008611.1	3033892	3034542	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	3033892..3034542	Mycobacterium ulcerans Agy99	4549676
YP_906500.1	CDS	MUL_2716	NC_008611.1	3036126	3037010	D	cytoplasmic protein; function unknown but contains oxidoreductase domain; hypothetical protein	3036126..3037010	Mycobacterium ulcerans Agy99	4549678
YP_906501.1	CDS	MUL_2717	NC_008611.1	3037007	3037741	D	hypothetical protein	3037007..3037741	Mycobacterium ulcerans Agy99	4549679
YP_906502.1	CDS	MUL_2718	NC_008611.1	3037970	3039103	D	PPE61; membrane protein; PPE family protein	3037970..3039103	Mycobacterium ulcerans Agy99	4549681
YP_906503.1	CDS	cdh	NC_008611.1	3039179	3039973	R	secreted protein; involved in phospholipid biosynthesis [catalytic activity: CDP-diacylglycerol + H(2)O = CMP + phosphatidate]; CDP-diacylglycerol pyrophosphatase	complement(3039179..3039973)	Mycobacterium ulcerans Agy99	4549682
YP_906504.1	CDS	MUL_2720	NC_008611.1	3040184	3040783	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(3040184..3040783)	Mycobacterium ulcerans Agy99	4549683
YP_906505.1	CDS	MUL_2721	NC_008611.1	3040780	3041373	R	cytoplasmic protein; hypothetical protein	complement(3040780..3041373)	Mycobacterium ulcerans Agy99	4549684
YP_906506.1	CDS	MUL_2722	NC_008611.1	3041372	3042619	D	hypothetical protein	3041372..3042619	Mycobacterium ulcerans Agy99	4549685
YP_906507.1	CDS	MUL_2723	NC_008611.1	3042672	3043667	D	cytoplasmic protein; hydrolase	3042672..3043667	Mycobacterium ulcerans Agy99	4549686
YP_906508.1	CDS	MUL_2724	NC_008611.1	3043739	3044038	R	membrane protein; hypothetical protein	complement(3043739..3044038)	Mycobacterium ulcerans Agy99	4549687
YP_906509.1	CDS	MUL_2725	NC_008611.1	3044485	3045327	D	cytoplasmic protein; hypothetical protein	3044485..3045327	Mycobacterium ulcerans Agy99	4552879
YP_906510.1	CDS	MUL_2726	NC_008611.1	3045590	3046669	D	cytoplasmic protein; hypothetical protein	3045590..3046669	Mycobacterium ulcerans Agy99	4552880
YP_906511.1	CDS	MUL_2727	NC_008611.1	3046737	3047936	D	cytoplasmic protein; aminotransferase	3046737..3047936	Mycobacterium ulcerans Agy99	4552881
YP_906512.1	CDS	MUL_2728	NC_008611.1	3047940	3048485	R	cytoplasmic protein; putative regulatory protein	complement(3047940..3048485)	Mycobacterium ulcerans Agy99	4552882
YP_906513.1	CDS	MUL_2729	NC_008611.1	3048509	3049468	D	membrane protein; hypothetical protein	3048509..3049468	Mycobacterium ulcerans Agy99	4552883
YP_906514.1	CDS	cysQ_1	NC_008611.1	3049487	3050215	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; could help control the pool of 3'-phosphoadenoside 5'-phosphosulfate, or its use in sulfite synthesis (by similarity); monophosphatase CysQ	complement(3049487..3050215)	Mycobacterium ulcerans Agy99	4552884
YP_906515.1	CDS	MUL_2734	NC_008611.1	3053998	3055044	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3053998..3055044)	Mycobacterium ulcerans Agy99	4552889
YP_906516.1	CDS	MUL_2735	NC_008611.1	3055895	3057229	D	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	3055895..3057229	Mycobacterium ulcerans Agy99	4552890
YP_906517.1	CDS	MUL_2736	NC_008611.1	3057353	3058399	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3057353..3058399)	Mycobacterium ulcerans Agy99	4552891
YP_906518.1	CDS	MUL_5108	NC_008611.1	3059209	3059388	D	potential pseuodgene; cytoplasmic protein; transposase	3059209..3059388	Mycobacterium ulcerans Agy99	4552892
YP_906519.1	CDS	MUL_2737	NC_008611.1	3060048	3061193	R	PPE51_1; detected in the membranr fraction by proteomics.; membrane protein; PPE family protein	complement(3060048..3061193)	Mycobacterium ulcerans Agy99	4552893
YP_906520.1	CDS	MUL_2738	NC_008611.1	3061983	3062960	R	cytoplasmic protein; function unknown but contains metal-dependant hydrolase domain identity; hypothetical protein	complement(3061983..3062960)	Mycobacterium ulcerans Agy99	4552895
YP_906521.1	CDS	MUL_2739	NC_008611.1	3062991	3063947	D	cytoplasmic protein; function unknown but has domain identity to UbiE, a methylase involved in ubiquinone/menaquinone biosynthesis; methylase	3062991..3063947	Mycobacterium ulcerans Agy99	4552896
YP_906522.1	CDS	MUL_2742	NC_008611.1	3065334	3066116	D	cytoplasmic protein; hypothetical protein	3065334..3066116	Mycobacterium ulcerans Agy99	4552898
YP_906523.1	CDS	MUL_2743	NC_008611.1	3066144	3068777	R	cytoplasmic protein; involved in transcriptional mechanism.; LuxR family transcriptional regulator	complement(3066144..3068777)	Mycobacterium ulcerans Agy99	4552899
YP_906524.1	CDS	htpG	NC_008611.1	3068982	3070928	D	molecular chaperone; heat shock protein 90	3068982..3070928	Mycobacterium ulcerans Agy99	4552900
YP_906525.1	CDS	MUL_2745	NC_008611.1	3070929	3071900	R	cytoplasmic protein; hypothetical protein	complement(3070929..3071900)	Mycobacterium ulcerans Agy99	4552901
YP_906526.1	CDS	MUL_2746	NC_008611.1	3072017	3072634	R	cytoplasmic protein; probably involved in a transcriptional mechanism; TetR family transcriptional regulator	complement(3072017..3072634)	Mycobacterium ulcerans Agy99	4552902
YP_906527.1	CDS	rubB_1	NC_008611.1	3072866	3073051	R	cytoplasmic protein; involved in the hydrocarbon hydroxylating system to convert conversion of dodecane to lauric acid, which transfers electrons from NADH to rubredoxin reductase and then through rubredoxin to alkane 1 monooxygenase.; rubredoxin RubB	complement(3072866..3073051)	Mycobacterium ulcerans Agy99	4552903
YP_906528.1	CDS	rubA_1	NC_008611.1	3073053	3073223	R	cytoplasmic protein; involved in the hydrocarbon hydroxylating system, which transfers electrons from NADH to rubredoxin reductase and then through rubredoxin to alkane 1 monooxygenase.; rubredoxin RubA	complement(3073053..3073223)	Mycobacterium ulcerans Agy99	4552904
YP_906529.1	CDS	alkB_1	NC_008611.1	3073220	3074440	R	membrane protein; thought to be involved in fatty acid metabolism. generates octanol and oxidized rubredoxin from octane and reduced rubredoxin. also hydroxylates fatty acids in the omega-position [catalytic activity: octane + reduced rubredoxin + (O)2 = 1-octanol + oxidized rubredoxin + H(2)O]; transmembrane alkane 1-monooxygenase AlkB	complement(3073220..3074440)	Mycobacterium ulcerans Agy99	4552905
YP_906530.1	CDS	MUL_2751	NC_008611.1	3076597	3077931	R	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	complement(3076597..3077931)	Mycobacterium ulcerans Agy99	4552907
YP_906531.1	CDS	MUL_2753	NC_008611.1	3078428	3079144	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism, possibly electron transfer.; oxidoreductase	3078428..3079144	Mycobacterium ulcerans Agy99	4552908
YP_906532.1	CDS	MUL_2755	NC_008611.1	3079392	3080012	D	cytoplasmic protein; cellular metabolism; oxidoreductase	3079392..3080012	Mycobacterium ulcerans Agy99	4552909
YP_906533.1	CDS	MUL_2756	NC_008611.1	3080026	3081054	R	cytoplasmic protein; acyl-CoA dehydrogenase	complement(3080026..3081054)	Mycobacterium ulcerans Agy99	4552910
YP_906534.1	CDS	MUL_2757	NC_008611.1	3081051	3082229	R	cytoplasmic protein; acyl-CoA dehydrogenase	complement(3081051..3082229)	Mycobacterium ulcerans Agy99	4552911
YP_906535.1	CDS	echA8_5	NC_008611.1	3082229	3083026	R	Also detected in the membrane fraction by proteomics.; cytoplasmic protein; oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA8_5	complement(3082229..3083026)	Mycobacterium ulcerans Agy99	4552912
YP_906536.1	CDS	MUL_2761	NC_008611.1	3083950	3084438	R	secreted protein; hypothetical protein	complement(3083950..3084438)	Mycobacterium ulcerans Agy99	4552914
YP_906537.1	CDS	MUL_2762	NC_008611.1	3084623	3085594	R	cytoplasmic protein; involved in transcriptional mechanism.; IclR family transcriptional regulator	complement(3084623..3085594)	Mycobacterium ulcerans Agy99	4552915
YP_906538.1	CDS	MUL_2763	NC_008611.1	3085932	3086537	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(3085932..3086537)	Mycobacterium ulcerans Agy99	4552917
YP_906539.1	CDS	MUL_2765	NC_008611.1	3087587	3088222	R	cytoplasmic protein; methyltransferase (methylase)	complement(3087587..3088222)	Mycobacterium ulcerans Agy99	4552919
YP_906540.1	CDS	MUL_2766	NC_008611.1	3088219	3089151	R	cytoplasmic protein; function unknown but high domain identity with O- Methyltransferases involved in polyketide biosynthesis; O-methyltransferase	complement(3088219..3089151)	Mycobacterium ulcerans Agy99	4552920
YP_906541.1	CDS	MUL_2767	NC_008611.1	3089265	3089681	D	membrane protein; hypothetical protein	3089265..3089681	Mycobacterium ulcerans Agy99	4552921
YP_906542.1	CDS	MUL_2768	NC_008611.1	3089761	3090603	D	cytoplasmic protein; function unknown, but high domain identity with epimerases and phenazine biosynthesis-like protein, PhzC/PhzF which is involved in dimerisation of two 2,3- dihydro-3-oxo-anthranilic acid molecules to create Pca by P. fluorescens.; hypothetical protein	3089761..3090603	Mycobacterium ulcerans Agy99	4552922
YP_906543.1	CDS	MUL_2769	NC_008611.1	3090835	3092166	R	cytoplasmic protein; hypothetical protein	complement(3090835..3092166)	Mycobacterium ulcerans Agy99	4552923
YP_906544.1	CDS	MUL_2770	NC_008611.1	3092159	3093346	R	membrane protein; hypothetical protein	complement(3092159..3093346)	Mycobacterium ulcerans Agy99	4552924
YP_906545.1	CDS	MUL_2772	NC_008611.1	3094565	3095197	D	secreted protein; function unknown but has ribonuclease I domain identity; hypothetical protein	3094565..3095197	Mycobacterium ulcerans Agy99	4552926
YP_906546.1	CDS	MUL_2773	NC_008611.1	3095672	3096592	D	membrane protein; function unknown but domain identity with mechanosensitive ion channels; hypothetical protein	3095672..3096592	Mycobacterium ulcerans Agy99	4552927
YP_906547.1	CDS	MUL_2774	NC_008611.1	3096693	3099638	R	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic fraction by 2D-LC- MS/MS; membrane protein; function unknown but contains multiple functional domains including vWA domain (von willebrand factor (vWF) type a domain; found in extracellular proteins, like integrins, and mediates adhesion. also contains a vault protein inter-alpha-trypsin domain; hypothetical protein	complement(3096693..3099638)	Mycobacterium ulcerans Agy99	4552928
YP_906548.1	CDS	MUL_2775	NC_008611.1	3099709	3100491	D	cytoplasmic protein; hypothetical protein	3099709..3100491	Mycobacterium ulcerans Agy99	4552929
YP_906549.1	CDS	MUL_2778	NC_008611.1	3102481	3103527	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3102481..3103527)	Mycobacterium ulcerans Agy99	4552947
YP_906550.1	CDS	MUL_2781	NC_008611.1	3104935	3105666	D	cytoplasmic protein; hypothetical protein	3104935..3105666	Mycobacterium ulcerans Agy99	4552949
YP_906551.1	CDS	MUL_2782	NC_008611.1	3106065	3108242	D	cytoplasmic protein; function unknown but contains glutamine synthetase catalytic domain; hypothetical protein	3106065..3108242	Mycobacterium ulcerans Agy99	4552950
YP_906552.1	CDS	MUL_2783	NC_008611.1	3108511	3109791	R	PE_PGRS39; membrane protein; PE-PGRS family protein	complement(3108511..3109791)	Mycobacterium ulcerans Agy99	4552951
YP_906553.1	CDS	MUL_2784	NC_008611.1	3110256	3110828	D	secreted protein; proline, glycine, valine-rich secreted protein	3110256..3110828	Mycobacterium ulcerans Agy99	4552952
YP_906554.1	CDS	MUL_2786	NC_008611.1	3112125	3112883	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; alanine rich hydrolase	3112125..3112883	Mycobacterium ulcerans Agy99	4552954
YP_906555.1	CDS	MUL_2787	NC_008611.1	3112900	3114675	R	membrane protein; function unknown. possibly transporter involved in transport of undeterminated substrate (possibly cationic amino acids) across the membrane: so responsible for the translocation of the substrate across the membrane.; hypothetical protein	complement(3112900..3114675)	Mycobacterium ulcerans Agy99	4552955
YP_906556.1	CDS	MUL_2788	NC_008611.1	3114759	3115976	R	cytoplasmic protein; function unknown, high domain identity with saccharopine dehydrogenase. this family comprises three structural domains that can not be separated in the linear sequence. in some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate.; saccharopine dehydrogenase	complement(3114759..3115976)	Mycobacterium ulcerans Agy99	4552956
YP_906557.1	CDS	MUL_2789	NC_008611.1	3116266	3117756	R	catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase	complement(3116266..3117756)	Mycobacterium ulcerans Agy99	4552957
YP_906558.1	CDS	MUL_2790	NC_008611.1	3118064	3118393	D	cytoplasmic protein; involved in transcriptional mechanism.; Lrp/AsnC family transcriptional regulator	3118064..3118393	Mycobacterium ulcerans Agy99	4552958
YP_906559.1	CDS	MUL_2791	NC_008611.1	3118390	3119745	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); membrane protein; function unknown, high domain identity with BioA, aminotransferase [coenzyme metabolism]; hypothetical protein	3118390..3119745	Mycobacterium ulcerans Agy99	4552959
YP_906560.1	CDS	MUL_2792	NC_008611.1	3119720	3120700	R	cytoplasmic protein; function unknown - possible oxidoreducatse; hypothetical protein	complement(3119720..3120700)	Mycobacterium ulcerans Agy99	4552960
YP_906561.1	CDS	MUL_2793	NC_008611.1	3120805	3121371	R	cytoplasmic protein; possibly involved in transcriptional mechanism.; transcriptional regulatory protein	complement(3120805..3121371)	Mycobacterium ulcerans Agy99	4552961
YP_906562.1	CDS	MUL_2794	NC_008611.1	3121486	3122331	D	function unknown, probably involved in cellular metabolism; short chain dehydrogenase	3121486..3122331	Mycobacterium ulcerans Agy99	4552962
YP_906563.1	CDS	MUL_2795	NC_008611.1	3122362	3122790	D	cytoplasmic protein; hypothetical protein	3122362..3122790	Mycobacterium ulcerans Agy99	4552963
YP_906564.1	CDS	MUL_2796	NC_008611.1	3122787	3123215	R	cytoplasmic protein; rifampin ADP-ribosyl transferase	complement(3122787..3123215)	Mycobacterium ulcerans Agy99	4552964
YP_906565.1	CDS	qor_1	NC_008611.1	3123217	3124440	R	cytoplasmic protein; catalyzes the one electron reduction of certain quinones [catalytic activity: NADPH + quinone = NADP+ + semiquinone]; quinone reductase, Qor	complement(3123217..3124440)	Mycobacterium ulcerans Agy99	4552965
YP_906566.1	CDS	amiC_1	NC_008611.1	3124478	3125914	D	membrane protein; hydrolyzes a monocarboxylic acid amide and generates a monocarboxylate [catalytic activity: a monocarboxylic acid amide + H(2)O = a monocarboxylate + NH(3)]; amidase	3124478..3125914	Mycobacterium ulcerans Agy99	4552966
YP_906567.1	CDS	plcB	NC_008611.1	3125957	3127492	R	membrane protein; hydrolyzes sphingomyelin in addition to phosphatidylcholine. probable virulence factor implicated in the pathogenesis of mycobacterium tuberculosis at the level of intracellular survival, by the alteration of cell signaling events or by direct cytotoxicity [catalytic activity: a phosphatidylcholine + H(2)O = 1,2- diacylglycerol + choline phosphate]; membrane-associated phospholipase C2 PlcB	complement(3125957..3127492)	Mycobacterium ulcerans Agy99	4552967
YP_906568.1	CDS	MUL_2802	NC_008611.1	3129318	3130121	R	cytoplasmic protein; function unknown but domain identity with streptomyces scabies esterase protein; hydrolase	complement(3129318..3130121)	Mycobacterium ulcerans Agy99	4552970
YP_906569.1	CDS	thiG	NC_008611.1	3130118	3130912	R	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase	complement(3130118..3130912)	Mycobacterium ulcerans Agy99	4552971
YP_906570.1	CDS	thiS	NC_008611.1	3130905	3131102	R	cytoplasmic protein; part of the thiamine biosynthesis operon. ThiS (thiamins) is a 66 aa protein involved in sulphur transfer. this is coded in the thiCEFSGH operon in E. coli.; thiamine biosynthesis protein ThiS	complement(3130905..3131102)	Mycobacterium ulcerans Agy99	4552972
YP_906571.1	CDS	thiO	NC_008611.1	3131099	3132118	R	membrane protein; involved in thiamine biosynthesis.; thiamine biosynthesis oxidoreductase ThiO	complement(3131099..3132118)	Mycobacterium ulcerans Agy99	4552973
YP_906572.1	CDS	thiE	NC_008611.1	3132280	3132942	D	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase	3132280..3132942	Mycobacterium ulcerans Agy99	4552974
YP_906573.1	CDS	mutT3	NC_008611.1	3132914	3133537	R	cytoplasmic protein; possibly involved in the go system responsible for removing an oxidatively damaged form of guanine (7,8- dihydro-8-oxoguanine) from DNA and the nucleotide pool. 8- oxo-dGTP is inserted opposite da and dc residues of template DNA with almost equal efficiency thus leading to a.T to G.C transversions. MutT specifically degrades 8-oxo- dGTP to the monophosphate [catalytic activity: 8-oxo-dGTP + H2O = 8-oxo-DGMP + pyrophosphate]; mutator protein MutT3	complement(3132914..3133537)	Mycobacterium ulcerans Agy99	4552975
YP_906574.1	CDS	MUL_2808	NC_008611.1	3133689	3135008	D	membrane protein; hypothetical protein	3133689..3135008	Mycobacterium ulcerans Agy99	4552976
YP_906575.1	CDS	glnH	NC_008611.1	3135008	3135994	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in active transport of glutamine across the membrane (import) interacts with the glutamine- transport system.; glutamine-binding lipoprotein GlnH	3135008..3135994	Mycobacterium ulcerans Agy99	4552977
YP_906576.1	CDS	pknG	NC_008611.1	3136099	3138297	D	Detected in the secreted protein fraction by proteomics.; membrane protein; involved in signal transduction (via phosphorylation) thought to regulate amino-acid uptake and stationary-phase metabolism. phosphorylates the peptide substrate myelin basic protein (MBP) at serine residues [catalytic activity: ATP + a protein = ADP + a P; serine/threonine-protein kinase PknG	3136099..3138297	Mycobacterium ulcerans Agy99	4552978
YP_906577.1	CDS	MUL_2811	NC_008611.1	3138422	3139282	R	cytoplasmic protein; hypothetical protein	complement(3138422..3139282)	Mycobacterium ulcerans Agy99	4552979
YP_906578.1	CDS	ackA	NC_008611.1	3139461	3140600	R	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase	complement(3139461..3140600)	Mycobacterium ulcerans Agy99	4552980
YP_906579.1	CDS	fgd1	NC_008611.1	3142710	3143720	R	cytoplasmic protein; catalyzes oxidation of glucose-6-phosphate to 6- phosphogluconolactone using coenzyme F420 (an *-hydroxy-5- deazaflavin derivative) as the electron acceptor.; F420-dependent glucose-6-phosphate dehydrogenase Fgd1	complement(3142710..3143720)	Mycobacterium ulcerans Agy99	4552982
YP_906580.1	CDS	MUL_2815	NC_008611.1	3143802	3144554	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; beta lactamase-like protein	3143802..3144554	Mycobacterium ulcerans Agy99	4552983
YP_906581.1	CDS	MUL_2821	NC_008611.1	3150532	3151578	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3150532..3151578)	Mycobacterium ulcerans Agy99	4552989
YP_906582.1	CDS	MUL_2823	NC_008611.1	3152758	3153264	R	cytoplasmic protein; function unknown but has domain identity with acetyltransferases; hypothetical protein	complement(3152758..3153264)	Mycobacterium ulcerans Agy99	4552991
YP_906583.1	CDS	MUL_2824	NC_008611.1	3153438	3153818	R	membrane protein; hypothetical protein	complement(3153438..3153818)	Mycobacterium ulcerans Agy99	4552992
YP_906584.1	CDS	fadE7	NC_008611.1	3153854	3155041	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE7	3153854..3155041	Mycobacterium ulcerans Agy99	4552993
YP_906585.1	CDS	MUL_2827	NC_008611.1	3156266	3157600	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	3156266..3157600	Mycobacterium ulcerans Agy99	4552995
YP_906586.1	CDS	MUL_2828	NC_008611.1	3157724	3158770	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3157724..3158770)	Mycobacterium ulcerans Agy99	4552996
YP_906587.1	CDS	MUL_2830	NC_008611.1	3159790	3159897	D	cytoplasmic protein; hypothetical protein	3159790..3159897	Mycobacterium ulcerans Agy99	4552998
YP_906588.1	CDS	MUL_2831	NC_008611.1	3160003	3160281	D	cytoplasmic protein; hypothetical protein	3160003..3160281	Mycobacterium ulcerans Agy99	4552999
YP_906589.1	CDS	lipU_1	NC_008611.1	3160374	3161438	D	Part of a 2158bp section not present in M. marinum M strain. However LipU orthologs are found in MTB and M. avium paratb; membrane protein; function unknown but probably involved in lipid hydrolysis; lipase LipU	3160374..3161438	Mycobacterium ulcerans Agy99	4553016
YP_906590.1	CDS	MUL_2833	NC_008611.1	3161464	3162093	R	cytoplasmic protein; hypothetical protein	complement(3161464..3162093)	Mycobacterium ulcerans Agy99	4553017
YP_906591.1	CDS	purA	NC_008611.1	3162090	3163388	R	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase	complement(3162090..3163388)	Mycobacterium ulcerans Agy99	4553018
YP_906592.1	CDS	MUL_2835	NC_008611.1	3163479	3164156	D	cytoplasmic protein; hypothetical protein	3163479..3164156	Mycobacterium ulcerans Agy99	4553019
YP_906593.1	CDS	MUL_2836	NC_008611.1	3164167	3164946	D	membrane protein; hypothetical protein	3164167..3164946	Mycobacterium ulcerans Agy99	4553020
YP_906594.1	CDS	MUL_2837	NC_008611.1	3164991	3165914	D	membrane protein; function unknown, possibly involved in transport of metal ions across the membrane.; efflux membrane protein	3164991..3165914	Mycobacterium ulcerans Agy99	4553021
YP_906595.1	CDS	MUL_2838	NC_008611.1	3165944	3166918	R	cytoplasmic protein; involved in sulfation: activity towards typical ceramide glycolipids and trehalose glycolipids.; glycolipid sulfotransferase	complement(3165944..3166918)	Mycobacterium ulcerans Agy99	4553022
YP_906596.1	CDS	MUL_5105	NC_008611.1	3166919	3167056	R	cytoplasmic protein; hypothetical protein	complement(3166919..3167056)	Mycobacterium ulcerans Agy99	4553023
YP_906597.1	CDS	MUL_2839	NC_008611.1	3167060	3167314	R	cytoplasmic protein; hypothetical protein	complement(3167060..3167314)	Mycobacterium ulcerans Agy99	4553024
YP_906598.1	CDS	MUL_2840	NC_008611.1	3167335	3168093	R	cytoplasmic protein; hypothetical protein	complement(3167335..3168093)	Mycobacterium ulcerans Agy99	4553025
YP_906599.1	CDS	MUL_2841	NC_008611.1	3168317	3168739	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(3168317..3168739)	Mycobacterium ulcerans Agy99	4553026
YP_906600.1	CDS	MUL_2842	NC_008611.1	3168881	3169696	D	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; hypothetical protein	3168881..3169696	Mycobacterium ulcerans Agy99	4553027
YP_906601.1	CDS	bioF2_3	NC_008611.1	3169801	3170475	R	cytoplasmic protein; could be involved in biotin biosynthesis (at the first step) [catalytic activity: 6-carboxyhexanoyl-CoA + L- alanine = 8-amino-7-oxononanoate + CoA + CO2]; 8-amino-7-oxononanoate synthase	complement(3169801..3170475)	Mycobacterium ulcerans Agy99	4553028
YP_906602.1	CDS	MUL_2844	NC_008611.1	3170669	3171715	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3170669..3171715)	Mycobacterium ulcerans Agy99	4553029
YP_906603.1	CDS	MUL_2846	NC_008611.1	3174525	3175073	R	cytoplasmic protein; hypothetical protein	complement(3174525..3175073)	Mycobacterium ulcerans Agy99	4553031
YP_906604.1	CDS	MUL_2847	NC_008611.1	3175082	3175687	R	cytoplasmic protein; GTP/ATP-binding protein	complement(3175082..3175687)	Mycobacterium ulcerans Agy99	4553032
YP_906605.1	CDS	MUL_2848	NC_008611.1	3175668	3175943	R	cytoplasmic protein; hypothetical protein	complement(3175668..3175943)	Mycobacterium ulcerans Agy99	4553033
YP_906606.1	CDS	MUL_2849	NC_008611.1	3176030	3176461	R	cytoplasmic protein; hypothetical protein	complement(3176030..3176461)	Mycobacterium ulcerans Agy99	4553034
YP_906607.1	CDS	MUL_2850	NC_008611.1	3176458	3179193	R	membrane protein; function unknown but may be a regulatory protein as it contains a signal transduction histidine kinase domain; putative regultory protein	complement(3176458..3179193)	Mycobacterium ulcerans Agy99	4553035
YP_906608.1	CDS	MUL_2851	NC_008611.1	3179410	3180015	R	cytoplasmic protein; function unknown but may be involved in RNA methylation; methyltransferase	complement(3179410..3180015)	Mycobacterium ulcerans Agy99	4553036
YP_906609.1	CDS	spoU	NC_008611.1	3180083	3180547	D	cytoplasmic protein; involved in rRNA methylation; tRNA/rRNA methyltransferase SpoU	3180083..3180547	Mycobacterium ulcerans Agy99	4553037
YP_906610.1	CDS	MUL_2853	NC_008611.1	3180728	3181936	D	PE_PGRS51; membrane protein; PE-PGRS family protein	3180728..3181936	Mycobacterium ulcerans Agy99	4553038
YP_906611.1	CDS	MUL_2854	NC_008611.1	3181948	3182592	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; function unknown, probably involved in cellular metabolism; nitroreductase	complement(3181948..3182592)	Mycobacterium ulcerans Agy99	4553039
YP_906612.1	CDS	MUL_2855	NC_008611.1	3182933	3183979	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3182933..3183979	Mycobacterium ulcerans Agy99	4553040
YP_906613.1	CDS	MUL_2856	NC_008611.1	3184204	3184521	R	hypothetical protein	complement(3184204..3184521)	Mycobacterium ulcerans Agy99	4553042
YP_906614.1	CDS	MUL_2857	NC_008611.1	3184630	3184899	R	cytoplasmic protein; this protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.; iron-regulated elongation factor Tu Tuf-like	complement(3184630..3184899)	Mycobacterium ulcerans Agy99	4553043
YP_906615.1	CDS	MUL_2858	NC_008611.1	3184889	3185332	D	cytoplasmic protein; hypothetical protein	3184889..3185332	Mycobacterium ulcerans Agy99	4553044
YP_906616.1	CDS	MUL_2860	NC_008611.1	3186250	3187296	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3186250..3187296)	Mycobacterium ulcerans Agy99	4553046
YP_906617.1	CDS	MUL_2861	NC_008611.1	3187661	3187948	R	hypothetical protein	complement(3187661..3187948)	Mycobacterium ulcerans Agy99	4553047
YP_906618.1	CDS	MUL_2862	NC_008611.1	3188463	3188753	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism; oxidoreductase	complement(3188463..3188753)	Mycobacterium ulcerans Agy99	4553049
YP_906619.1	CDS	MUL_2863	NC_008611.1	3188834	3189406	R	membrane protein; Mce associated membrane protein	complement(3188834..3189406)	Mycobacterium ulcerans Agy99	4553095
YP_906620.1	CDS	MUL_2864	NC_008611.1	3189403	3189966	R	membrane protein; Mce associated membrane protein	complement(3189403..3189966)	Mycobacterium ulcerans Agy99	4553096
YP_906621.1	CDS	mce3F	NC_008611.1	3190010	3191473	R	membrane protein; function unknown, but thought involved in host cell invasion.; MCE-family protein Mce3F	complement(3190010..3191473)	Mycobacterium ulcerans Agy99	4553097
YP_906622.1	CDS	lprM	NC_008611.1	3191474	3192643	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE family lipoprotein LprM	complement(3191474..3192643)	Mycobacterium ulcerans Agy99	4553098
YP_906623.1	CDS	mce3D	NC_008611.1	3192643	3193926	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce3D	complement(3192643..3193926)	Mycobacterium ulcerans Agy99	4553099
YP_906624.1	CDS	mce3B	NC_008611.1	3195203	3196231	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce3B	complement(3195203..3196231)	Mycobacterium ulcerans Agy99	4553101
YP_906625.1	CDS	yrb3B	NC_008611.1	3197697	3198389	R	membrane protein; function unknown, but probably part of Mce3 operon and member of YrbE family; integral membrane protein, Yrb3B	complement(3197697..3198389)	Mycobacterium ulcerans Agy99	4553103
YP_906626.1	CDS	yrbE3A	NC_008611.1	3198561	3199394	R	membrane protein; integral membrane protein YrbE3A	complement(3198561..3199394)	Mycobacterium ulcerans Agy99	4553104
YP_906627.1	CDS	MUL_2873	NC_008611.1	3199719	3199913	R	cytoplasmic protein; ferredoxin	complement(3199719..3199913)	Mycobacterium ulcerans Agy99	4553105
YP_906628.1	CDS	MUL_2874	NC_008611.1	3199910	3200266	R	cytoplasmic protein; function unknown, domain identity with ketosteroid isomerase-related proteins; hypothetical protein	complement(3199910..3200266)	Mycobacterium ulcerans Agy99	4553106
YP_906629.1	CDS	MUL_2876	NC_008611.1	3201681	3202916	D	cytoplasmic protein; function unknown but weak domain identity with two- component response regulators; putative regulatory protein	3201681..3202916	Mycobacterium ulcerans Agy99	4553108
YP_906630.1	CDS	MUL_2877	NC_008611.1	3202919	3204442	R	cytoplasmic protein; thought to oxidize a wide variety of aliphatic and aromatic aldehydes.; aldehyde dehydrogenase	complement(3202919..3204442)	Mycobacterium ulcerans Agy99	4553109
YP_906631.1	CDS	MUL_2878	NC_008611.1	3204439	3204858	R	cytoplasmic protein; hypothetical protein	complement(3204439..3204858)	Mycobacterium ulcerans Agy99	4553110
YP_906632.1	CDS	mce3R	NC_008611.1	3205341	3206543	D	cytoplasmic protein; involved in transcriptional mechanism; repression of the Mce3 operon. could also have a regulatory action on the Mce2 operon.; TetR family transcriptional regulator	3205341..3206543	Mycobacterium ulcerans Agy99	4553111
YP_906633.1	CDS	MUL_2881	NC_008611.1	3206870	3207232	R	membrane protein; maybe required for the translocation of the substrate across the membrane.; multidrugs-transport integral membrane protein Mmr-like	complement(3206870..3207232)	Mycobacterium ulcerans Agy99	4553112
YP_906634.1	CDS	MUL_2882	NC_008611.1	3207567	3207887	R	cytoplasmic protein; hypothetical protein	complement(3207567..3207887)	Mycobacterium ulcerans Agy99	4553113
YP_906635.1	CDS	MUL_2885	NC_008611.1	3208993	3209763	R	function unknown, probably involved in cellular metabolism; short-chain type dehydrogenase/reductase	complement(3208993..3209763)	Mycobacterium ulcerans Agy99	4553314
YP_906636.1	CDS	ribA1	NC_008611.1	3209767	3210864	R	cytoplasmic protein; involved in riboflavin biosynthesis [catalytic activity : GTP + 3 H(2)O = formate + 2,5-diamino-6-hydroxy- 4-(5-phosphoribosylamino)pyrimidine + diphosphate]; riboflavin biosynthesis protein RibA1	complement(3209767..3210864)	Mycobacterium ulcerans Agy99	4553315
YP_906637.1	CDS	MUL_2887	NC_008611.1	3210861	3211394	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism; oxidoreducatse	complement(3210861..3211394)	Mycobacterium ulcerans Agy99	4553316
YP_906638.1	CDS	ephB	NC_008611.1	3211391	3212446	R	cytoplasmic protein; this enzyme acts on epoxides (alkene oxides, oxiranes) and Arene oxides. plays a role in xenobiotic metabolism by degrading potential toxic epoxides. also determines steady-state levels of physiological mediators.; epoxide hydrolase EphB	complement(3211391..3212446)	Mycobacterium ulcerans Agy99	4553317
YP_906639.1	CDS	MUL_2889	NC_008611.1	3212458	3214977	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, may be involved in electron transfer.; oxygenase	complement(3212458..3214977)	Mycobacterium ulcerans Agy99	4553318
YP_906640.1	CDS	MUL_2890	NC_008611.1	3215005	3216141	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism; oxygenase	complement(3215005..3216141)	Mycobacterium ulcerans Agy99	4553319
YP_906641.1	CDS	fadE17	NC_008611.1	3217401	3218573	D	cytoplasmic protein; function unknown, but supposed involvement in lipid degradation.; acyl-CoA dehydrogenase FadE17	3217401..3218573	Mycobacterium ulcerans Agy99	4553321
YP_906642.1	CDS	fadE18	NC_008611.1	3218575	3219663	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, but supposed involvement in lipid degradation.; acyl-CoA dehydrogenase FadE18	3218575..3219663	Mycobacterium ulcerans Agy99	4553322
YP_906643.1	CDS	tpx	NC_008611.1	3219685	3220182	R	antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase	complement(3219685..3220182)	Mycobacterium ulcerans Agy99	4553323
YP_906644.1	CDS	MUL_2895	NC_008611.1	3220328	3221371	R	cytoplasmic protein; function unknown but domain identity with Fe-S oxidoreductases; oxidoreductase	complement(3220328..3221371)	Mycobacterium ulcerans Agy99	4553324
YP_906645.1	CDS	MUL_2896	NC_008611.1	3221415	3222461	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3221415..3222461)	Mycobacterium ulcerans Agy99	4553325
YP_906646.1	CDS	MUL_2898	NC_008611.1	3223035	3224369	R	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	complement(3223035..3224369)	Mycobacterium ulcerans Agy99	4553327
YP_906647.1	CDS	MUL_5111	NC_008611.1	3224436	3224819	R	cytoplasmic protein; hypothetical protein	complement(3224436..3224819)	Mycobacterium ulcerans Agy99	4553328
YP_906648.1	CDS	MUL_2901	NC_008611.1	3226070	3227116	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3226070..3227116	Mycobacterium ulcerans Agy99	4553330
YP_906649.1	CDS	MUL_2902	NC_008611.1	3228220	3229170	D	cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein	3228220..3229170	Mycobacterium ulcerans Agy99	4553331
YP_906650.1	CDS	MUL_2904	NC_008611.1	3229990	3230454	R	membrane protein; hypothetical protein	complement(3229990..3230454)	Mycobacterium ulcerans Agy99	4553333
YP_906651.1	CDS	MUL_2905	NC_008611.1	3230552	3231112	D	cytoplasmic protein; function unknown but contains dihydrofolate reductase domain; hypothetical protein	3230552..3231112	Mycobacterium ulcerans Agy99	4553334
YP_906652.1	CDS	MUL_2906	NC_008611.1	3231143	3232027	R	cytoplasmic protein; function unknown but has weak indentity with hydrolase domains; hypothetical protein	complement(3231143..3232027)	Mycobacterium ulcerans Agy99	4553335
YP_906653.1	CDS	MUL_2907	NC_008611.1	3232029	3232505	R	cytoplasmic protein; hypothetical protein	complement(3232029..3232505)	Mycobacterium ulcerans Agy99	4553336
YP_906654.1	CDS	MUL_2909	NC_008611.1	3233381	3234154	R	cytoplasmic protein; hypothetical protein	complement(3233381..3234154)	Mycobacterium ulcerans Agy99	4553338
YP_906655.1	CDS	MUL_2910	NC_008611.1	3234251	3234664	R	cytoplasmic protein; hypothetical protein	complement(3234251..3234664)	Mycobacterium ulcerans Agy99	4553339
YP_906656.1	CDS	MUL_2911	NC_008611.1	3234735	3236204	R	cytoplasmic protein; function unknown: involved in carbohydrate transport and metabolism; alpha-L-fucosidase	complement(3234735..3236204)	Mycobacterium ulcerans Agy99	4553340
YP_906657.1	CDS	ahpC_1	NC_008611.1	3236418	3236966	D	cytoplasmic protein; involved in oxidative stress response.; alkyl hydroperoxide reductase C protein AhpC	3236418..3236966	Mycobacterium ulcerans Agy99	4553341
YP_906658.1	CDS	MUL_2913	NC_008611.1	3236963	3238297	R	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	complement(3236963..3238297)	Mycobacterium ulcerans Agy99	4553342
YP_906659.1	CDS	MUL_2914	NC_008611.1	3238991	3240355	R	catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase	complement(3238991..3240355)	Mycobacterium ulcerans Agy99	4553343
YP_906660.1	CDS	MUL_2915	NC_008611.1	3240788	3241834	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3240788..3241834	Mycobacterium ulcerans Agy99	4553344
YP_906661.1	CDS	MUL_2916	NC_008611.1	3241943	3242422	D	cytoplasmic protein; hypothetical protein	3241943..3242422	Mycobacterium ulcerans Agy99	4553345
YP_906662.1	CDS	MUL_2917	NC_008611.1	3242562	3243140	D	cytoplasmic protein; hypothetical protein	3242562..3243140	Mycobacterium ulcerans Agy99	4553346
YP_906663.1	CDS	fadD31	NC_008611.1	3245086	3246960	R	activates fatty acids by binding to coenzyme A; putative fatty-acid--CoA ligase	complement(3245086..3246960)	Mycobacterium ulcerans Agy99	4553348
YP_906664.1	CDS	MUL_2922	NC_008611.1	3248100	3248624	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	3248100..3248624	Mycobacterium ulcerans Agy99	4553350
YP_906665.1	CDS	MUL_2924	NC_008611.1	3248804	3249205	D	membrane protein; hypothetical protein	3248804..3249205	Mycobacterium ulcerans Agy99	4553352
YP_906666.1	CDS	MUL_2925	NC_008611.1	3249499	3249930	D	cytoplasmic protein; hypothetical protein	3249499..3249930	Mycobacterium ulcerans Agy99	4553353
YP_906667.1	CDS	aao	NC_008611.1	3249945	3250928	R	cytoplasmic protein; wide specificity for D-amino acids. also acts on glycine [catalytic activity: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2]; D-amino acid oxidase Aao	complement(3249945..3250928)	Mycobacterium ulcerans Agy99	4553354
YP_906668.1	CDS	MUL_2927	NC_008611.1	3250941	3251408	R	membrane protein; hypothetical protein	complement(3250941..3251408)	Mycobacterium ulcerans Agy99	4553355
YP_906669.1	CDS	MUL_2928	NC_008611.1	3251457	3251834	R	cytoplasmic protein; hypothetical protein	complement(3251457..3251834)	Mycobacterium ulcerans Agy99	4553356
YP_906670.1	CDS	MUL_2929	NC_008611.1	3251870	3252595	R	cytoplasmic protein; hypothetical protein	complement(3251870..3252595)	Mycobacterium ulcerans Agy99	4553357
YP_906671.1	CDS	MUL_2930	NC_008611.1	3253335	3254381	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3253335..3254381	Mycobacterium ulcerans Agy99	4553358
YP_906672.1	CDS	MUL_2931	NC_008611.1	3254347	3254637	R	cytoplasmic protein; hypothetical protein	complement(3254347..3254637)	Mycobacterium ulcerans Agy99	4553359
YP_906673.1	CDS	MUL_2932	NC_008611.1	3254728	3255975	R	membrane protein; PPE family protein	complement(3254728..3255975)	Mycobacterium ulcerans Agy99	4553360
YP_906674.1	CDS	MUL_2933	NC_008611.1	3256310	3256909	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(3256310..3256909)	Mycobacterium ulcerans Agy99	4553361
YP_906675.1	CDS	MUL_2934	NC_008611.1	3257024	3258604	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; dehydrogenase	3257024..3258604	Mycobacterium ulcerans Agy99	4553362
YP_906676.1	CDS	fadB5	NC_008611.1	3258655	3259659	R	cytoplasmic protein; thought to be involved in fatty acid degradation. FadB and FadA are the alpha and BetA subunits of the multifunctional enzyme complex of the fatty acid degradation cycle.; oxidoreductase FadB5	complement(3258655..3259659)	Mycobacterium ulcerans Agy99	4553363
YP_906677.1	CDS	MUL_2936	NC_008611.1	3259702	3260130	R	cytoplasmic protein; hypothetical protein	complement(3259702..3260130)	Mycobacterium ulcerans Agy99	4553364
YP_906678.1	CDS	MUL_2937	NC_008611.1	3260127	3260453	R	cytoplasmic protein; involved in transcriptional regulation.; ArsR-type repressor	complement(3260127..3260453)	Mycobacterium ulcerans Agy99	4553365
YP_906679.1	CDS	MUL_2938	NC_008611.1	3260512	3261231	R	cytoplasmic protein; hypothetical protein	complement(3260512..3261231)	Mycobacterium ulcerans Agy99	4553416
YP_906680.1	CDS	MUL_2939	NC_008611.1	3261285	3261638	R	cytoplasmic protein; hypothetical protein	complement(3261285..3261638)	Mycobacterium ulcerans Agy99	4553417
YP_906681.1	CDS	MUL_2941	NC_008611.1	3262415	3262783	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; hypothetical protein	complement(3262415..3262783)	Mycobacterium ulcerans Agy99	4553419
YP_906682.1	CDS	MUL_2942	NC_008611.1	3262948	3263994	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3262948..3263994)	Mycobacterium ulcerans Agy99	4553420
YP_906683.1	CDS	aceAb	NC_008611.1	3264294	3266582	D	cytoplasmic protein; involved in glyoxylate bypass, an alternative to the tricarboxylic acid cycle [catalytic activity: isocitrate = succinate + glyoxylate]; isocitrate lyase AceAb	3264294..3266582	Mycobacterium ulcerans Agy99	4553421
YP_906684.1	CDS	MUL_2948	NC_008611.1	3270518	3270985	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	3270518..3270985	Mycobacterium ulcerans Agy99	4553424
YP_906685.1	CDS	MUL_2949	NC_008611.1	3271044	3272207	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; monooxygenase	complement(3271044..3272207)	Mycobacterium ulcerans Agy99	4553425
YP_906686.1	CDS	lipD	NC_008611.1	3273357	3274640	D	membrane protein; function unknown, lipolytic enzyme probably involved in cellular metabolism; lipase LipD	3273357..3274640	Mycobacterium ulcerans Agy99	4553427
YP_906687.1	CDS	MUL_2952	NC_008611.1	3274661	3275410	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; hypothetical protein	complement(3274661..3275410)	Mycobacterium ulcerans Agy99	4553428
YP_906688.1	CDS	MUL_2955	NC_008611.1	3277732	3280677	D	membrane protein; involved in (I) tranposition of IS2606 and (II) transport of sialic acid across the membrane. responsible for the translocation of the substrate across the membrane.; fusion protein of transposase for IS2606 and sialic acid-transport integral membrane protein NanT	3277732..3280677	Mycobacterium ulcerans Agy99	4553430
YP_906689.1	CDS	cinA	NC_008611.1	3280350	3281639	R	cytoplasmic protein; CinA is the first gene in the competence-inducible (cin) operon, and is thought to be specifically required at some stage in the process of transformation.; competence damage-inducible protein A	complement(3280350..3281639)	Mycobacterium ulcerans Agy99	4553431
YP_906690.1	CDS	MUL_2957	NC_008611.1	3281744	3281986	R	membrane protein; PE-PGRS family protein	complement(3281744..3281986)	Mycobacterium ulcerans Agy99	4553432
YP_906691.1	CDS	lppD	NC_008611.1	3282216	3282710	D	Truncated wrt to orthologues, missing last 12aa - potential pseudogene; membrane protein; function unknown but contains predicted phosphatase domain; lipoprotein LppD	3282216..3282710	Mycobacterium ulcerans Agy99	4553433
YP_906692.1	CDS	MUL_2959	NC_008611.1	3282707	3283033	R	cytoplasmic protein; hypothetical protein	complement(3282707..3283033)	Mycobacterium ulcerans Agy99	4553434
YP_906693.1	CDS	MUL_2960	NC_008611.1	3283330	3283761	D	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase	3283330..3283761	Mycobacterium ulcerans Agy99	4553435
YP_906694.1	CDS	MUL_2961	NC_008611.1	3283803	3284711	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown but significant domain identity with O-Methyltransferases involved in polyketide biosynthesis; hypothetical protein	3283803..3284711	Mycobacterium ulcerans Agy99	4553436
YP_906695.1	CDS	MUL_2962	NC_008611.1	3284701	3285726	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism; dehydrogenase	complement(3284701..3285726)	Mycobacterium ulcerans Agy99	4553437
YP_906696.1	CDS	adhC	NC_008611.1	3288017	3289030	D	cytoplasmic protein; generates aldehyde or ketone from alcohol [catalytic activity: alcohol + NADP(+) = aldehyde or ketone + NADPH]; NADP-dependent alcohol dehydrogenase AdhC	3288017..3289030	Mycobacterium ulcerans Agy99	4553440
YP_906697.1	CDS	MUL_2966	NC_008611.1	3289060	3289611	D	cytoplasmic protein; function unknown but some similarity with YceI-like family proteins. in E. coli YceI is a base-induced periplasmic protein. its function has not yet been characterised.; hypothetical protein	3289060..3289611	Mycobacterium ulcerans Agy99	4553441
YP_906698.1	CDS	MUL_2967	NC_008611.1	3289786	3290457	D	membrane protein; hypothetical protein	3289786..3290457	Mycobacterium ulcerans Agy99	4553442
YP_906699.1	CDS	MUL_2968	NC_008611.1	3290477	3291634	R	cytoplasmic protein; hypothetical protein	complement(3290477..3291634)	Mycobacterium ulcerans Agy99	4553443
YP_906700.1	CDS	MUL_2969	NC_008611.1	3292008	3293054	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3292008..3293054	Mycobacterium ulcerans Agy99	4553444
YP_906701.1	CDS	fbpB	NC_008611.1	3293710	3294687	D	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasm by proteomics.; membrane protein; involved in cell wall mycoloylation. proteins of the antigen 85 complex are responsible for the high affinity of mycobacteria to fibronectin. possesses a mycolyltransferase activity required for the biogenesis of trehalose dimycolate (cord factor), a dominant structure necessary for maintaining cell wall integrity.; secreted antigen 85-B FbpB	3293710..3294687	Mycobacterium ulcerans Agy99	4553446
YP_906702.1	CDS	MUL_2971	NC_008611.1	3294771	3295445	R	cytoplasmic protein; hypothetical protein	complement(3294771..3295445)	Mycobacterium ulcerans Agy99	4553447
YP_906703.1	CDS	MUL_2972	NC_008611.1	3295547	3296491	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	3295547..3296491	Mycobacterium ulcerans Agy99	4553448
YP_906704.1	CDS	MUL_2973	NC_008611.1	3296562	3297416	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	3296562..3297416	Mycobacterium ulcerans Agy99	4553449
YP_906705.1	CDS	MUL_2974	NC_008611.1	3297433	3298041	D	catalyzes the interconversion of chorismate to prephenate; chorismate mutase	3297433..3298041	Mycobacterium ulcerans Agy99	4553450
YP_906706.1	CDS	MUL_2975	NC_008611.1	3298133	3298573	D	secreted protein; thought to promote the resuscitation and growth of dormant, nongrowing cell. could also stimulate the growth of several other high G+C Gram+ organisms, E.G. mycobacterium avium, mycobacterium bovis (BCG), mycobacterium kansasii, mycobacterium smegmatis.; resuscitation-promoting factor-like protein	3298133..3298573	Mycobacterium ulcerans Agy99	4553569
YP_906707.1	CDS	MUL_2976	NC_008611.1	3298629	3299087	D	cytoplasmic protein; hypothetical protein	3298629..3299087	Mycobacterium ulcerans Agy99	4553570
YP_906708.1	CDS	MUL_2977	NC_008611.1	3299102	3299935	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; short chain dehydrogenase	3299102..3299935	Mycobacterium ulcerans Agy99	4553571
YP_906709.1	CDS	lppE	NC_008611.1	3299977	3300399	D	membrane protein; lipoprotein LppE	3299977..3300399	Mycobacterium ulcerans Agy99	4553572
YP_906710.1	CDS	cyp140A5	NC_008611.1	3300510	3301826	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 140A5 Cyp140A5	3300510..3301826	Mycobacterium ulcerans Agy99	4553573
YP_906711.1	CDS	MUL_2980	NC_008611.1	3301857	3302387	D	cytoplasmic protein; hypothetical protein	3301857..3302387	Mycobacterium ulcerans Agy99	4553574
YP_906712.1	CDS	MUL_2982	NC_008611.1	3303207	3304253	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3303207..3304253	Mycobacterium ulcerans Agy99	4553576
YP_906713.1	CDS	MUL_2983	NC_008611.1	3304324	3305658	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(3304324..3305658)	Mycobacterium ulcerans Agy99	4553577
YP_906714.1	CDS	MUL_2984	NC_008611.1	3306111	3307157	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3306111..3307157	Mycobacterium ulcerans Agy99	4553578
YP_906715.1	CDS	MUL_2988	NC_008611.1	3311428	3312582	R	cytoplasmic protein; hypothetical protein	complement(3311428..3312582)	Mycobacterium ulcerans Agy99	4553580
YP_906716.1	CDS	MUL_2992	NC_008611.1	3315364	3315858	R	cytoplasmic protein; hypothetical protein	complement(3315364..3315858)	Mycobacterium ulcerans Agy99	4553583
YP_906717.1	CDS	bfrA	NC_008611.1	3316300	3316779	R	cytoplasmic protein; involved in iron storage (may perform analogous functions in iron detoxification and storage as that of animal ferritins); ferritin is an intracellular molecule that stores iron in a soluble, nontoxic, readily available form. the functional molecule, which is composed of 24 chains, is roughly spherical and contains a central cavity in which the polymeric ferric iron core is deposited.; bacterioferritin BfrA	complement(3316300..3316779)	Mycobacterium ulcerans Agy99	4553584
YP_906718.1	CDS	MUL_2994	NC_008611.1	3317107	3317289	D	function unknown but like upstream ORF, contains bacterioferritin-associated ferredoxin domain; hypothetical protein	3317107..3317289	Mycobacterium ulcerans Agy99	4553605
YP_906719.1	CDS	echA8_6	NC_008611.1	3317320	3318078	R	cytoplasmic protein; oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA8_6	complement(3317320..3318078)	Mycobacterium ulcerans Agy99	4553606
YP_906720.1	CDS	MUL_2996	NC_008611.1	3318088	3318531	R	Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; hypothetical protein	complement(3318088..3318531)	Mycobacterium ulcerans Agy99	4553607
YP_906721.1	CDS	MUL_2997	NC_008611.1	3318528	3319241	R	cytoplasmic protein; hypothetical protein	complement(3318528..3319241)	Mycobacterium ulcerans Agy99	4553608
YP_906722.1	CDS	oxyR	NC_008611.1	3319276	3320220	R	cytoplasmic protein; hydrogen peroxide-inducible genes activator, OxyR	complement(3319276..3320220)	Mycobacterium ulcerans Agy99	4553609
YP_906723.1	CDS	ahpC	NC_008611.1	3320333	3320920	D	Also detected in the extracellular matrix and the membrane fraction by proteomics.; cytoplasmic protein; involved in oxidative stress response.; alkyl hydroperoxide reductase C protein AhpC	3320333..3320920	Mycobacterium ulcerans Agy99	4553610
YP_906724.1	CDS	ahpD	NC_008611.1	3320961	3321497	D	Detected in the cytoplasmic and membrane fractions by LCMSMS and also detected in the extracellular matrix by proteomics.; cytoplasmic protein; involved in oxidative stress response.; alkyl hydroperoxide reductase D protein AhpD	3320961..3321497	Mycobacterium ulcerans Agy99	4553611
YP_906725.1	CDS	treS_1	NC_008611.1	3321508	3322860	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in trehalose biosynthesis (protective effect) converts maltose to trehalose. mycobacteria can produce trehalose from glucose 6-phosphate and UDP-glucose (the OtsA-OtsB pathway) from glycogen-like alpha(1-->4)- linked glucose polymers (the TreY-TreZ pathway) and from maltose (the TreS pathway); trehalose synthase TreS	3321508..3322860	Mycobacterium ulcerans Agy99	4553612
YP_906726.1	CDS	lldD2	NC_008611.1	3322976	3324220	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; involved in respiration; catalyzes conversion of lactate into pyruvate [catalytic activity: (S)-lactate + 2 ferricytochrome C = pyruvate + 2 ferrocytochrome C]; L-lactate dehydrogenase (cytochrome) LldD2	3322976..3324220	Mycobacterium ulcerans Agy99	4553613
YP_906727.1	CDS	lon	NC_008611.1	3324324	3326666	D	cytoplasmic protein; function unknown but probably plays a role in posttranslational protein modification, turnover and chaperone functions.; Lon, ATP-dependent Lon protease	3324324..3326666	Mycobacterium ulcerans Agy99	4553614
YP_906728.1	CDS	MUL_3004	NC_008611.1	3326771	3327160	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; hypothetical protein	3326771..3327160	Mycobacterium ulcerans Agy99	4553615
YP_906729.1	CDS	MUL_3005	NC_008611.1	3327163	3327495	D	cytoplasmic protein; hypothetical protein	3327163..3327495	Mycobacterium ulcerans Agy99	4553616
YP_906730.1	CDS	MUL_3006	NC_008611.1	3327619	3328065	D	membrane protein; hypothetical protein	3327619..3328065	Mycobacterium ulcerans Agy99	4553617
YP_906731.1	CDS	MUL_3007	NC_008611.1	3328167	3330266	R	cytoplasmic protein; function unknown but contains nucleoside- diphosphate-sugar epimerase domain identity - a domain associated with cell envelope biogenesis, carbohydrate transport and metabolism.; hypothetical protein	complement(3328167..3330266)	Mycobacterium ulcerans Agy99	4553618
YP_906732.1	CDS	MUL_3008	NC_008611.1	3330388	3331872	R	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	complement(3330388..3331872)	Mycobacterium ulcerans Agy99	4553619
YP_906733.1	CDS	MUL_3010	NC_008611.1	3334505	3334831	R	cytoplasmic protein; function unknown but contains acetyltransferase domain identity; acetyltransferase	complement(3334505..3334831)	Mycobacterium ulcerans Agy99	4553621
YP_906734.1	CDS	MUL_3011	NC_008611.1	3335158	3336015	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; short chain dehydrogenase	3335158..3336015	Mycobacterium ulcerans Agy99	4553622
YP_906735.1	CDS	xfp	NC_008611.1	3336061	3338463	D	Detected in the membrane and secreted fractions by proteomics (2D-LC-MS/MS); membrane protein; bacterial enzyme that splits fructose-6-P and/or xylulose-5-P with the aid of inorganic phosphate into either acetyl-P and erythrose-4-p and/or acetyl-P and glyeraldehyde-3-p; putative phosphoketolase	3336061..3338463	Mycobacterium ulcerans Agy99	4553623
YP_906736.1	CDS	MUL_3013	NC_008611.1	3338514	3339179	D	cytoplasmic protein; hypothetical protein	3338514..3339179	Mycobacterium ulcerans Agy99	4553640
YP_906737.1	CDS	adhA	NC_008611.1	3340262	3341290	R	cytoplasmic protein; catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD; alcohol dehydrogenase AdhA	complement(3340262..3341290)	Mycobacterium ulcerans Agy99	4553642
YP_906738.1	CDS	MUL_3016	NC_008611.1	3341356	3341643	R	membrane protein; hypothetical protein	complement(3341356..3341643)	Mycobacterium ulcerans Agy99	4553643
YP_906739.1	CDS	apa	NC_008611.1	3341808	3342728	R	Two isoform were also detected by proteomics in the cytoplasm.; membrane protein; function unknown could mediate bacterial attachment to host cells.; alanine and proline rich secreted protein Apa	complement(3341808..3342728)	Mycobacterium ulcerans Agy99	4553644
YP_906740.1	CDS	modC	NC_008611.1	3342815	3343936	R	membrane protein; part of the binding-protein-dependent transport system ModABC for molybdenum; responsible for energy coupling to the transport system.; molybdenum-transport ABC transporter ATP-binding protein ModC	complement(3342815..3343936)	Mycobacterium ulcerans Agy99	4553645
YP_906741.1	CDS	MUL_5112	NC_008611.1	3344120	3344320	R	cytoplasmic protein; hypothetical protein	complement(3344120..3344320)	Mycobacterium ulcerans Agy99	4553646
YP_906742.1	CDS	MUL_3019	NC_008611.1	3344317	3345774	R	cytoplasmic protein; function unknown but shows high identity with sulfide-quinone reductase from chlorobium tepidum; hypothetical protein	complement(3344317..3345774)	Mycobacterium ulcerans Agy99	4553647
YP_906743.1	CDS	omt	NC_008611.1	3345976	3346809	D	cytoplasmic protein; function unknown, but possible involved in lipid metabolism; O-methyltransferase Omt	3345976..3346809	Mycobacterium ulcerans Agy99	4553648
YP_906744.1	CDS	modB	NC_008611.1	3346821	3347615	R	membrane protein; part of the binding-protein-dependent transport system ModABC for molybdenum; responsible for the translocation of the substrate across the membrane.; molybdenum-transport integral membrane protein ABC transporter ModB	complement(3346821..3347615)	Mycobacterium ulcerans Agy99	4553649
YP_906745.1	CDS	modA	NC_008611.1	3347624	3348337	R	membrane protein; involved in the active transport of molybdenum into the cell across the membrane (import) part of the binding- protein-dependent transport system ModABC.; molybdate-binding lipoprotein ModA	complement(3347624..3348337)	Mycobacterium ulcerans Agy99	4553650
YP_906746.1	CDS	MUL_3023	NC_008611.1	3348675	3349352	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; short chain dehydrogenase	3348675..3349352	Mycobacterium ulcerans Agy99	4553651
YP_906747.1	CDS	MUL_3024	NC_008611.1	3349403	3350326	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; oxidoreductase	3349403..3350326	Mycobacterium ulcerans Agy99	4553652
YP_906748.1	CDS	ndh	NC_008611.1	3350490	3351875	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transfer of electrons from NADH to the respiratory chain. the immediate electron acceptor for the enzyme is believed to be ubiquinone. does not couple the redox reaction to proton translocation.; NADH dehydrogenase Ndh	3350490..3351875	Mycobacterium ulcerans Agy99	4553653
YP_906749.1	CDS	ureD	NC_008611.1	3351946	3352590	R	cytoplasmic protein; UreD is involved in activation of the urease enzyme via the UreD-UreF-UreG-urease complex and is required for urease nickel metallocenter assembly; urease accessory protein UreD	complement(3351946..3352590)	Mycobacterium ulcerans Agy99	4553654
YP_906750.1	CDS	ureG	NC_008611.1	3352590	3353261	R	cytoplasmic protein; UreG is required for functional incorporation of the urease nickel metallocenter. it is not known whether UreG binds GTP or some other nucleotide.; urease accessory protein UreG	complement(3352590..3353261)	Mycobacterium ulcerans Agy99	4553655
YP_906751.1	CDS	ureF	NC_008611.1	3353272	3353892	R	cytoplasmic protein; required for the insertion of the nickel ion at the active site of the urease protein; urease accessory protein UreF	complement(3353272..3353892)	Mycobacterium ulcerans Agy99	4553656
YP_906752.1	CDS	ureC	NC_008611.1	3353907	3355640	R	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha	complement(3353907..3355640)	Mycobacterium ulcerans Agy99	4553657
YP_906753.1	CDS	ureB	NC_008611.1	3355640	3355951	R	cytoplasmic protein; involved in the conversion of UreA to NH3 [catalytic activity: UreA + H2O = CO2 + 2 NH3]; urease subunit beta UreB	complement(3355640..3355951)	Mycobacterium ulcerans Agy99	4553658
YP_906754.1	CDS	ureA	NC_008611.1	3355948	3356250	R	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma	complement(3355948..3356250)	Mycobacterium ulcerans Agy99	4553659
YP_906755.1	CDS	MUL_3032	NC_008611.1	3356310	3356750	R	cytoplasmic protein; function unknown but domain identity suggests possibly involved in aromatic compound catabolism; hypothetical protein	complement(3356310..3356750)	Mycobacterium ulcerans Agy99	4553660
YP_906756.1	CDS	MUL_3033	NC_008611.1	3357177	3357593	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	3357177..3357593	Mycobacterium ulcerans Agy99	4553661
YP_906757.1	CDS	MUL_3034	NC_008611.1	3357608	3358558	D	membrane protein; function unknown but significant domain identity with HtpX, Zn-dependent protease with chaperone function.; hypothetical protein	3357608..3358558	Mycobacterium ulcerans Agy99	4553662
YP_906758.1	CDS	gnd1	NC_008611.1	3358668	3360119	D	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase	3358668..3360119	Mycobacterium ulcerans Agy99	4553663
YP_906759.1	CDS	guaB1	NC_008611.1	3360151	3361587	D	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase	3360151..3361587	Mycobacterium ulcerans Agy99	4553664
YP_906760.1	CDS	ilvG	NC_008611.1	3363463	3365115	D	cytoplasmic protein; valine and isoleucine biosynthesis (first step) [catalytic activity : 2-acetolactate + CO(2) = 2 pyruvate]; hypothetical protein	3363463..3365115	Mycobacterium ulcerans Agy99	4553667
YP_906761.1	CDS	secA2	NC_008611.1	3365146	3367566	D	SecA2; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond to SecA2; which is non-essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA	3365146..3367566	Mycobacterium ulcerans Agy99	4553668
YP_906762.1	CDS	pgsA2	NC_008611.1	3367687	3368316	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; thought to be involved in cardiolipin biosynthesis; generates cardiolipin from phosphatidylglycerol and CDP- diacylglycerol [catalytic activity : may be: phosphatidylglycerol + phosphatidylglycerol -> cardiolipin + glycerol, or: CDP-diacylglycerol + glycerol 3-phosphate = CMP + 3-(3-phosphatidyl)-glycerol 1-phosphate]; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	3367687..3368316	Mycobacterium ulcerans Agy99	4553669
YP_906763.1	CDS	MUL_3042	NC_008611.1	3368309	3369229	D	cytoplasmic protein; hypothetical protein	3368309..3369229	Mycobacterium ulcerans Agy99	4553670
YP_906764.1	CDS	MUL_3043	NC_008611.1	3369255	3369623	D	membrane protein; hypothetical protein	3369255..3369623	Mycobacterium ulcerans Agy99	4553671
YP_906765.1	CDS	MUL_3044	NC_008611.1	3369648	3370538	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	3369648..3370538	Mycobacterium ulcerans Agy99	4553672
YP_906766.1	CDS	gcvH	NC_008611.1	3370573	3370977	D	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H	3370573..3370977	Mycobacterium ulcerans Agy99	4553673
YP_906767.1	CDS	MUL_3046	NC_008611.1	3371235	3371723	D	Detected in the cytoplamic fraction by LC-MS/MS; cytoplasmic protein; function unknown but contains an FHA domain. these domains are involved in nuclear signalling domain and may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine.; hypothetical protein	3371235..3371723	Mycobacterium ulcerans Agy99	4553674
YP_906768.1	CDS	MUL_3047	NC_008611.1	3371720	3372475	D	cytoplasmic protein; function unknown but high N-terminal domain identity with the MerR helix-turn-helix transcription regulator.; putative regulatory protein	3371720..3372475	Mycobacterium ulcerans Agy99	4553675
YP_906769.1	CDS	MUL_3048	NC_008611.1	3372616	3373110	D	cytoplasmic protein; hypothetical protein	3372616..3373110	Mycobacterium ulcerans Agy99	4553676
YP_906770.1	CDS	MUL_3049	NC_008611.1	3373388	3374020	D	cytoplasmic protein; function unknown but contains MerR helix-turn-helix transcription regulatory domain; regulatory protein	3373388..3374020	Mycobacterium ulcerans Agy99	4553677
YP_906771.1	CDS	gcvB	NC_008611.1	3374383	3377220	D	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase	3374383..3377220	Mycobacterium ulcerans Agy99	4553678
YP_906772.1	CDS	MUL_3052	NC_008611.1	3378726	3379598	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; may act on a wide range of 1-haloalkanes, haloalcohols, haloalkenes and some haloaromatic compounds [catalytic activity: 1-haloalkane + H(2)O, a primary alcohol + halide]; haloalkane dehalogenase	complement(3378726..3379598)	Mycobacterium ulcerans Agy99	4553680
YP_906773.1	CDS	MUL_3053	NC_008611.1	3379582	3380514	D	cytoplasmic protein; hydrolase	3379582..3380514	Mycobacterium ulcerans Agy99	4553681
YP_906774.1	CDS	MUL_3054	NC_008611.1	3380544	3382751	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; function unknown but weak C-term identity with vWA domain (von willebrand factor type a domain) this domain is found in extracellular proteins, like integrins, and mediates adhesion.; hypothetical protein	complement(3380544..3382751)	Mycobacterium ulcerans Agy99	4553682
YP_906775.1	CDS	glcB	NC_008611.1	3382802	3384997	R	catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G	complement(3382802..3384997)	Mycobacterium ulcerans Agy99	4553683
YP_906776.1	CDS	MUL_3056	NC_008611.1	3385216	3386814	R	PE_PGRS34; membrane protein; PE-PGRS family protein	complement(3385216..3386814)	Mycobacterium ulcerans Agy99	4553684
YP_906777.1	CDS	MUL_3059	NC_008611.1	3389118	3391037	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; thought to be involved in active transport of drugs across the membrane (export): multidrugs resistance by an export mechanism. responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; drug-transport transmembrane ABC transporter ATP-binding protein	3389118..3391037	Mycobacterium ulcerans Agy99	4553687
YP_906778.1	CDS	MUL_3060	NC_008611.1	3391292	3392338	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3391292..3392338)	Mycobacterium ulcerans Agy99	4553688
YP_906779.1	CDS	MUL_3061	NC_008611.1	3392966	3394300	D	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	3392966..3394300	Mycobacterium ulcerans Agy99	4553689
YP_906780.1	CDS	MUL_3062	NC_008611.1	3394387	3396999	D	PE_PGRS9_1; membrane protein; PE-PGRS family protein	3394387..3396999	Mycobacterium ulcerans Agy99	4553690
YP_906781.1	CDS	MUL_3063	NC_008611.1	3397045	3399021	R	translation fusion of two CDS caused by frameshift at 3' end of hypothetical protein MON6433 (3398526); membrane protein; function unknown, probably involved in cellular metabolism; flavoprotein	complement(3397045..3399021)	Mycobacterium ulcerans Agy99	4553691
YP_906782.1	CDS	MUL_3065	NC_008611.1	3399900	3400946	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3399900..3400946	Mycobacterium ulcerans Agy99	4553693
YP_906783.1	CDS	erg3	NC_008611.1	3401367	3402329	R	membrane protein; involved in lipid desaturation; membrane-bound C-5 sterol desaturase Erg3	complement(3401367..3402329)	Mycobacterium ulcerans Agy99	4553694
YP_906784.1	CDS	MUL_3067	NC_008611.1	3402593	3403123	D	cytoplasmic protein; function unknown - weak domain identity with lipase/esterase proteins; hypothetical protein	3402593..3403123	Mycobacterium ulcerans Agy99	4553695
YP_906785.1	CDS	MUL_3068	NC_008611.1	3403120	3404319	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; NADH dehydrogenase	3403120..3404319	Mycobacterium ulcerans Agy99	4553696
YP_906786.1	CDS	mgtC	NC_008611.1	3404321	3405049	R	membrane protein; thought to be involved in Mg2+ transport (import) may act as an accessory protein for MgtB so mediating magnesium influx into the cytosol [catalytic activity: ATP + H(2)O + mg(2+)(out) = ADP + phosphate + mg(2+)(in)]; Mg2+ transport p-type ATPase C MgtC	complement(3404321..3405049)	Mycobacterium ulcerans Agy99	4553697
YP_906787.1	CDS	MUL_3070	NC_008611.1	3405257	3405493	R	cytoplasmic protein; hypothetical protein	complement(3405257..3405493)	Mycobacterium ulcerans Agy99	4553698
YP_906788.1	CDS	MUL_3071	NC_008611.1	3405897	3407303	R	PPE30; membrane protein; PPE family protein	complement(3405897..3407303)	Mycobacterium ulcerans Agy99	4553699
YP_906789.1	CDS	MUL_3072	NC_008611.1	3407390	3408670	R	PPE32; membrane protein; PPE family protein	complement(3407390..3408670)	Mycobacterium ulcerans Agy99	4553700
YP_906790.1	CDS	MUL_3074	NC_008611.1	3409755	3410915	R	PPE31; membrane protein; PPE family protein	complement(3409755..3410915)	Mycobacterium ulcerans Agy99	4553701
YP_906791.1	CDS	MUL_3076	NC_008611.1	3412998	3414350	R	PPE31_1; membrane protein; PPE family protein	complement(3412998..3414350)	Mycobacterium ulcerans Agy99	4553703
YP_906792.1	CDS	MUL_3077	NC_008611.1	3415250	3417082	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); membrane protein; function unknown, but domain identity to aaa, ATPase family proteins that have been associated with chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.; hypothetical protein	complement(3415250..3417082)	Mycobacterium ulcerans Agy99	4553704
YP_906793.1	CDS	MUL_3078	NC_008611.1	3417079	3418290	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(3417079..3418290)	Mycobacterium ulcerans Agy99	4553705
YP_906794.1	CDS	mycP5	NC_008611.1	3418287	3420026	R	Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; function unknown proteolytic activity but subtilases are a family of serine proteases that can play a role in posttranslational modification.; proline rich membrane-anchored mycosin MycP5	complement(3418287..3420026)	Mycobacterium ulcerans Agy99	4553706
YP_906795.1	CDS	MUL_3080	NC_008611.1	3420004	3421515	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; hypothetical protein	complement(3420004..3421515)	Mycobacterium ulcerans Agy99	4553707
YP_906796.1	CDS	MUL_3081	NC_008611.1	3421800	3422702	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; hypothetical protein	complement(3421800..3422702)	Mycobacterium ulcerans Agy99	4553708
YP_906797.1	CDS	esxN	NC_008611.1	3422791	3423075	R	Also Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; secreted protein; EsaT-6 like protein EsxN	complement(3422791..3423075)	Mycobacterium ulcerans Agy99	4553709
YP_906798.1	CDS	esxM	NC_008611.1	3423127	3423429	R	Detected in the secreted fraction by proteomics.; secreted protein; EsaT-6 like protein EsxM	complement(3423127..3423429)	Mycobacterium ulcerans Agy99	4553710
YP_906799.1	CDS	MUL_3084	NC_008611.1	3423773	3424072	R	PE19; membrane protein; PE family protein	complement(3423773..3424072)	Mycobacterium ulcerans Agy99	4553711
YP_906800.1	CDS	MUL_3085	NC_008611.1	3424894	3425940	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3424894..3425940	Mycobacterium ulcerans Agy99	4553712
YP_906801.1	CDS	MUL_3086	NC_008611.1	3426028	3426348	R	secreted protein; hypothetical protein	complement(3426028..3426348)	Mycobacterium ulcerans Agy99	4553731
YP_906802.1	CDS	MUL_3087	NC_008611.1	3426422	3427642	R	PPE26; Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; PPE family protein	complement(3426422..3427642)	Mycobacterium ulcerans Agy99	4553732
YP_906803.1	CDS	MUL_3088	NC_008611.1	3427676	3427975	R	PE19_1; membrane protein; PE family protein	complement(3427676..3427975)	Mycobacterium ulcerans Agy99	4553733
YP_906804.1	CDS	MUL_3089	NC_008611.1	3428174	3429430	R	PPE25; membrane protein; PPE family protein	complement(3428174..3429430)	Mycobacterium ulcerans Agy99	4553734
YP_906805.1	CDS	MUL_3090	NC_008611.1	3429982	3430176	R	cytoplasmic protein; ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.; ferredoxin	complement(3429982..3430176)	Mycobacterium ulcerans Agy99	4553736
YP_906806.1	CDS	cyp143A4	NC_008611.1	3430439	3431614	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 143A4 Cyp143A4	3430439..3431614	Mycobacterium ulcerans Agy99	4553737
YP_906807.1	CDS	MUL_3092	NC_008611.1	3431646	3435818	R	Detected in the membrane fraction by proteomics.; membrane protein; function unknown but has multiple FtsK/SpoIIIE protein domains. This domain contains a putative ATP binding P-loop motif and is found in the FtsK cell division protein from E. coli and the stage III sporulation protein E SpoIIIE.; FtsK/SpoIIIE family protein	complement(3431646..3435818)	Mycobacterium ulcerans Agy99	4553738
YP_906808.1	CDS	MUL_3093	NC_008611.1	3435815	3437338	R	Detected in the membrane fraction by proteomics.; membrane protein; hypothetical protein	complement(3435815..3437338)	Mycobacterium ulcerans Agy99	4553739
YP_906809.1	CDS	malQ	NC_008611.1	3437662	3439833	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transfers a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan; 4-alpha-glucanotransferase	3437662..3439833	Mycobacterium ulcerans Agy99	4553740
YP_906810.1	CDS	MUL_3096	NC_008611.1	3440536	3441099	R	cytoplasmic protein; hypothetical protein	complement(3440536..3441099)	Mycobacterium ulcerans Agy99	4553742
YP_906811.1	CDS	MUL_3098	NC_008611.1	3443396	3443827	D	cytoplasmic protein; hypothetical protein	3443396..3443827	Mycobacterium ulcerans Agy99	4553744
YP_906812.1	CDS	MUL_3101	NC_008611.1	3447693	3448307	D	cytoplasmic protein; hypothetical protein	3447693..3448307	Mycobacterium ulcerans Agy99	4553747
YP_906813.1	CDS	MUL_3103	NC_008611.1	3450497	3451024	D	cytoplasmic protein; hypothetical protein	3450497..3451024	Mycobacterium ulcerans Agy99	4553803
YP_906814.1	CDS	MUL_3104	NC_008611.1	3451706	3452794	R	cytoplasmic protein; glycosyl transferase family protein	complement(3451706..3452794)	Mycobacterium ulcerans Agy99	4553804
YP_906815.1	CDS	MUL_3105	NC_008611.1	3452897	3453766	R	membrane protein; function unknown but contains signal peptide; hypothetical protein	complement(3452897..3453766)	Mycobacterium ulcerans Agy99	4553805
YP_906816.1	CDS	cyp143A3	NC_008611.1	3453819	3454991	R	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 143A3 Cyp143A3	complement(3453819..3454991)	Mycobacterium ulcerans Agy99	4553806
YP_906817.1	CDS	MUL_3107	NC_008611.1	3455153	3455773	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown - contains signal peptide; hypothetical protein	complement(3455153..3455773)	Mycobacterium ulcerans Agy99	4553807
YP_906818.1	CDS	MUL_3108	NC_008611.1	3456003	3456896	D	cytoplasmic protein; short-chain type dehydrogenase/reductase	3456003..3456896	Mycobacterium ulcerans Agy99	4553808
YP_906819.1	CDS	MUL_3110	NC_008611.1	3458892	3459548	D	cytoplasmic protein; hypothetical protein	3458892..3459548	Mycobacterium ulcerans Agy99	4553810
YP_906820.1	CDS	MUL_3111	NC_008611.1	3459548	3459931	D	cytoplasmic protein; hypothetical protein	3459548..3459931	Mycobacterium ulcerans Agy99	4553811
YP_906821.1	CDS	MUL_3113	NC_008611.1	3460717	3461355	D	cytoplasmic protein; involved in transcriptional mechanism.; AcrR family transcriptional regulator	3460717..3461355	Mycobacterium ulcerans Agy99	4553813
YP_906822.1	CDS	MUL_3114	NC_008611.1	3461469	3461960	R	cytoplasmic protein; hypothetical protein	complement(3461469..3461960)	Mycobacterium ulcerans Agy99	4553814
YP_906823.1	CDS	MUL_3115	NC_008611.1	3462327	3462881	D	cytoplasmic protein; could cause methylation of unknown substrate.; methyltransferase	3462327..3462881	Mycobacterium ulcerans Agy99	4553815
YP_906824.1	CDS	trxB1_1	NC_008611.1	3463025	3463321	R	cytoplasmic protein; thioredoxin participates in various redox reactions through the reversible oxidation of its active center dithiol, to a disulfide, & catalyzes dithiol-disulfide exchange reactions.; thioredoxin TrxB1	complement(3463025..3463321)	Mycobacterium ulcerans Agy99	4553816
YP_906825.1	CDS	MUL_3117	NC_008611.1	3463457	3463726	D	cytoplasmic protein; hypothetical protein	3463457..3463726	Mycobacterium ulcerans Agy99	4553817
YP_906826.1	CDS	MUL_3118	NC_008611.1	3463760	3464185	D	cytoplasmic protein; hypothetical protein	3463760..3464185	Mycobacterium ulcerans Agy99	4553818
YP_906827.1	CDS	MUL_3119	NC_008611.1	3464241	3464603	D	cytoplasmic protein; hypothetical protein	3464241..3464603	Mycobacterium ulcerans Agy99	4553819
YP_906828.1	CDS	MUL_3122	NC_008611.1	3466651	3467892	D	hypothetical protein	3466651..3467892	Mycobacterium ulcerans Agy99	4553821
YP_906829.1	CDS	MUL_3123	NC_008611.1	3467960	3469165	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown but contains aminopeptidase domain identity; hypothetical protein	3467960..3469165	Mycobacterium ulcerans Agy99	4553822
YP_906830.1	CDS	MUL_3124	NC_008611.1	3469162	3470448	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, probably involved in cellular metabolism; oxidoreductase	3469162..3470448	Mycobacterium ulcerans Agy99	4553841
YP_906831.1	CDS	MUL_3125	NC_008611.1	3470542	3471921	D	cytoplasmic protein; hypothetical protein	3470542..3471921	Mycobacterium ulcerans Agy99	4553842
YP_906832.1	CDS	MUL_3127	NC_008611.1	3472767	3474053	D	membrane protein; PPE family protein	3472767..3474053	Mycobacterium ulcerans Agy99	4553843
YP_906833.1	CDS	MUL_3128	NC_008611.1	3474405	3474959	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	complement(3474405..3474959)	Mycobacterium ulcerans Agy99	4553844
YP_906834.1	CDS	cyp144A4	NC_008611.1	3479506	3480720	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 144A4 Cyp144A4	3479506..3480720	Mycobacterium ulcerans Agy99	4553846
YP_906835.1	CDS	MUL_3133	NC_008611.1	3481883	3482929	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3481883..3482929)	Mycobacterium ulcerans Agy99	4553848
YP_906836.1	CDS	MUL_3138	NC_008611.1	3486073	3486750	R	secreted protein; hypothetical protein	complement(3486073..3486750)	Mycobacterium ulcerans Agy99	4553851
YP_906837.1	CDS	MUL_3139	NC_008611.1	3486810	3487607	R	Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; function unknown, probably involved in cellular metabolism; short-chain dehydrogenase	complement(3486810..3487607)	Mycobacterium ulcerans Agy99	4553852
YP_906838.1	CDS	MUL_3141	NC_008611.1	3490098	3490820	R	function unknown, lipolytic enzyme probably involved in cellular metabolism.; esterase/lipase	complement(3490098..3490820)	Mycobacterium ulcerans Agy99	4553854
YP_906839.1	CDS	MUL_3142	NC_008611.1	3490955	3491371	D	cytoplasmic protein; function unknown but domain identity suggests it may be a signal-transduction protein; hypothetical protein	3490955..3491371	Mycobacterium ulcerans Agy99	4553855
YP_906840.1	CDS	MUL_3143	NC_008611.1	3491430	3492620	R	cytoplasmic protein; function unknown role in cellular metabolism; amidohydrolase	complement(3491430..3492620)	Mycobacterium ulcerans Agy99	4553856
YP_906841.1	CDS	araD	NC_008611.1	3492746	3493570	R	cytoplasmic protein; domain identity suggests this CDS encodes an AraD- like, ribulose-5-phosphate 4-epimerase. this enzyme and related epimerases and aldolases are involved in carbohydrate transport and metabolism.; ribulose-5-phosphate 4-epimerase, AraD	complement(3492746..3493570)	Mycobacterium ulcerans Agy99	4553857
YP_906842.1	CDS	MUL_3145	NC_008611.1	3493506	3494918	R	cytoplasmic protein; function unknown but domain identity suggests this CDS is Acs-like, acyl-coenzyme a synthetases/AMP-(fatty) acid ligases involved in lipid metabolism.; hypothetical protein	complement(3493506..3494918)	Mycobacterium ulcerans Agy99	4553858
YP_906843.1	CDS	MUL_3146	NC_008611.1	3495483	3495905	D	cytoplasmic protein; acetyltransferase	3495483..3495905	Mycobacterium ulcerans Agy99	4553859
YP_906844.1	CDS	MUL_3147	NC_008611.1	3496050	3496991	D	membrane protein; function unknown but some domain identity with Zn- dependent proteases; hypothetical protein	3496050..3496991	Mycobacterium ulcerans Agy99	4553860
YP_906845.1	CDS	MUL_3148	NC_008611.1	3497062	3497577	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	3497062..3497577	Mycobacterium ulcerans Agy99	4553861
YP_906846.1	CDS	MUL_3149	NC_008611.1	3497610	3500264	R	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; thought to be involved in active transport of undeterminated substrate (possibly lipooligosaccharide) across the membrane. responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; transmembrane ABC transporter ATP-binding protein	complement(3497610..3500264)	Mycobacterium ulcerans Agy99	4553862
YP_906847.1	CDS	MUL_3150	NC_008611.1	3500384	3501718	D	cytoplasmic protein; hypothetical protein	3500384..3501718	Mycobacterium ulcerans Agy99	4553863
YP_906848.1	CDS	MUL_3152	NC_008611.1	3503183	3504229	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3503183..3504229	Mycobacterium ulcerans Agy99	4553865
YP_906849.1	CDS	MUL_3153	NC_008611.1	3504298	3505632	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(3504298..3505632)	Mycobacterium ulcerans Agy99	4553866
YP_906850.1	CDS	MUL_3154	NC_008611.1	3506887	3507744	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; dehydrogenase	complement(3506887..3507744)	Mycobacterium ulcerans Agy99	4553867
YP_906851.1	CDS	MUL_3155	NC_008611.1	3508023	3509330	R	membrane protein; involved in transport of unknown substrate across the membrane.; hypothetical protein	complement(3508023..3509330)	Mycobacterium ulcerans Agy99	4553868
YP_906852.1	CDS	MUL_3156	NC_008611.1	3509487	3509828	R	cytoplasmic protein; hypothetical protein	complement(3509487..3509828)	Mycobacterium ulcerans Agy99	4553869
YP_906853.1	CDS	MUL_3157	NC_008611.1	3509874	3510341	R	cytoplasmic protein; hypothetical protein	complement(3509874..3510341)	Mycobacterium ulcerans Agy99	4553870
YP_906854.1	CDS	MUL_3160	NC_008611.1	3511854	3512702	D	Detected in the cytoplamic and membrane fractions by LCMSMS; cytoplasmic protein; possibly involved in detoxification reactions following oxidative damage to lipids.; short-chain dehydrogenase	3511854..3512702	Mycobacterium ulcerans Agy99	4553872
YP_906855.1	CDS	MUL_3161	NC_008611.1	3512788	3514137	D	cytoplasmic protein; hypothetical protein	3512788..3514137	Mycobacterium ulcerans Agy99	4553873
YP_906856.1	CDS	MUL_3162	NC_008611.1	3514369	3515529	D	cytoplasmic protein; hypothetical protein	3514369..3515529	Mycobacterium ulcerans Agy99	4553874
YP_906857.1	CDS	MUL_3166	NC_008611.1	3518971	3519729	D	Detected in the secreted protein fractions by 2D-LC- MS/MS.; secreted protein; hypothetical protein	3518971..3519729	Mycobacterium ulcerans Agy99	4553878
YP_906858.1	CDS	MUL_3167	NC_008611.1	3519745	3521040	R	membrane protein; H(+)-stimulated, highly selective, divalent cation uptake system. responsible for the translocation of the divalent metal across the membrane.; divalent cation-transport integral membrane protein	complement(3519745..3521040)	Mycobacterium ulcerans Agy99	4553879
YP_906859.1	CDS	MUL_3168	NC_008611.1	3521254	3522048	D	cytoplasmic protein; short chain dehydrogenase	3521254..3522048	Mycobacterium ulcerans Agy99	4553880
YP_906860.1	CDS	MUL_3169	NC_008611.1	3522069	3526601	R	PPE8; membrane protein; PPE family protein	complement(3522069..3526601)	Mycobacterium ulcerans Agy99	4553881
YP_906861.1	CDS	MUL_3170	NC_008611.1	3527230	3528096	D	cytoplasmic protein; hypothetical protein	3527230..3528096	Mycobacterium ulcerans Agy99	4553882
YP_906862.1	CDS	MUL_3171	NC_008611.1	3528579	3529271	D	cytoplasmic protein; involved in the synthesis of decaprenyl diphosphate, a molecule which has a central role in the biosynthesis of most features of the mycobacterial cell wall. adds seven more isoprene units to omega,E, Z- farnesyl diphosphate and releases decaprenyl diphosphate.; Z-decaprenyl diphosphate synthase	3528579..3529271	Mycobacterium ulcerans Agy99	4553883
YP_906863.1	CDS	MUL_3172	NC_008611.1	3529484	3530422	D	membrane protein; hypothetical protein	3529484..3530422	Mycobacterium ulcerans Agy99	4553884
YP_906864.1	CDS	ndh1	NC_008611.1	3530419	3531543	D	cytoplasmic protein; transfer of electrons from NADH to the respiratory chain. the immediate electron acceptor for the enzyme is believed to be ubiquinone. does not couple the redox reaction to proton translocation.; NADH dehydrogenase Ndh1	3530419..3531543	Mycobacterium ulcerans Agy99	4553885
YP_906865.1	CDS	MUL_3174	NC_008611.1	3531552	3533021	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); secreted protein; function unknown but contains signal peptide; hypothetical protein	complement(3531552..3533021)	Mycobacterium ulcerans Agy99	4553886
YP_906866.1	CDS	tex	NC_008611.1	3533237	3535600	R	cytoplasmic protein; function unknown but may play a role in protein translation; transcriptional accessory protein Tex	complement(3533237..3535600)	Mycobacterium ulcerans Agy99	4553887
YP_906867.1	CDS	ceoC1	NC_008611.1	3535670	3536392	R	membrane protein; part of a potassium transport system.; TRK system potassium uptake protein CeoC1	complement(3535670..3536392)	Mycobacterium ulcerans Agy99	4553888
YP_906868.1	CDS	MUL_3177	NC_008611.1	3536639	3538135	D	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter	3536639..3538135	Mycobacterium ulcerans Agy99	4553889
YP_906869.1	CDS	MUL_3178	NC_008611.1	3538145	3539500	R	membrane protein; hypothetical protein	complement(3538145..3539500)	Mycobacterium ulcerans Agy99	4553890
YP_906870.1	CDS	MUL_3179	NC_008611.1	3539683	3540729	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3539683..3540729)	Mycobacterium ulcerans Agy99	4553891
YP_906871.1	CDS	pknE	NC_008611.1	3541009	3542772	R	Detected in the membrane fraction by proteomics.; membrane protein; involved in signal transduction (via phosphorylation) thought to be involved in membrane transport [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; Ser/Thr protein kinase	complement(3541009..3542772)	Mycobacterium ulcerans Agy99	4553892
YP_906872.1	CDS	MUL_3181	NC_008611.1	3543001	3543738	R	cytoplasmic protein; hypothetical protein	complement(3543001..3543738)	Mycobacterium ulcerans Agy99	4554108
YP_906873.1	CDS	potE	NC_008611.1	3543831	3545090	R	membrane protein; thought to be involved in transport amino acids across the membrane.; amino acid transporter PotE	complement(3543831..3545090)	Mycobacterium ulcerans Agy99	4554109
YP_906874.1	CDS	MUL_3184	NC_008611.1	3547996	3548367	D	cytoplasmic protein; hypothetical protein	3547996..3548367	Mycobacterium ulcerans Agy99	4554111
YP_906875.1	CDS	MUL_3186	NC_008611.1	3551848	3553269	R	membrane protein; function unknown. seems to influence both cell surface interactions among mycobacteria and the interactions of bacteria with macrophages.; PE-PGRS family protein	complement(3551848..3553269)	Mycobacterium ulcerans Agy99	4554113
YP_906876.1	CDS	MUL_3187	NC_008611.1	3553400	3554821	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in active transport of unknown sugars across the membrane. responsible for the translocation of the substrate across the membrane.; sugar transporter	complement(3553400..3554821)	Mycobacterium ulcerans Agy99	4554114
YP_906877.1	CDS	MUL_3188	NC_008611.1	3555174	3556034	D	hypothetical protein	3555174..3556034	Mycobacterium ulcerans Agy99	4554115
YP_906878.1	CDS	MUL_3189	NC_008611.1	3556336	3557523	D	Detected in the membrane fraction by proteomics (LC- MS/MS); secreted protein; function unknown but contains signal peptide and domain identity with periplasmic component of the tol biopolymer transport system.; hypothetical protein	3556336..3557523	Mycobacterium ulcerans Agy99	4554116
YP_906879.1	CDS	gabD2	NC_008611.1	3557527	3559083	R	NADP-dependent semialdehyde dehydrogenase; part of alternative pathway from alpha-ketoglutarate to succinate; succinate-semialdehyde dehydrogenase	complement(3557527..3559083)	Mycobacterium ulcerans Agy99	4554117
YP_906880.1	CDS	MUL_3191	NC_008611.1	3559252	3560238	R	cytoplasmic protein; function unknown but domain identity with penicillin V acylase and related amidases; hydrolase/amidase	complement(3559252..3560238)	Mycobacterium ulcerans Agy99	4554118
YP_906881.1	CDS	MUL_3192	NC_008611.1	3560491	3561168	D	secreted protein; function unknown but contains signal peptide; hypothetical protein	3560491..3561168	Mycobacterium ulcerans Agy99	4554119
YP_906882.1	CDS	MUL_3194	NC_008611.1	3564025	3564333	R	membrane protein; hypothetical protein	complement(3564025..3564333)	Mycobacterium ulcerans Agy99	4554121
YP_906883.1	CDS	MUL_3195	NC_008611.1	3564363	3565391	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hydrolase	3564363..3565391	Mycobacterium ulcerans Agy99	4554122
YP_906884.1	CDS	MUL_3196	NC_008611.1	3565433	3566731	R	cytoplasmic protein; hypothetical protein	complement(3565433..3566731)	Mycobacterium ulcerans Agy99	4554123
YP_906885.1	CDS	idsB	NC_008611.1	3566788	3567774	R	cytoplasmic protein; involved in biosynthesis of membrane ether-linked lipids. catalyzes the trans-addition of the three molecules of Ipp onto DMAPP to form geranylgeranyl pyrophosphate which is a precursor of the ether-linked lipids. catalyzes the consecutive condensation of; polyprenyl synthetase IdsB	complement(3566788..3567774)	Mycobacterium ulcerans Agy99	4554124
YP_906886.1	CDS	MUL_3198	NC_008611.1	3568205	3568714	D	cytoplasmic protein; function unknown but may be involved in inhibition of protein synthesis by cleavage of mRNA; translation initiation inhibitor	3568205..3568714	Mycobacterium ulcerans Agy99	4554125
YP_906887.1	CDS	MUL_3199	NC_008611.1	3568769	3569710	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; hypothetical protein	3568769..3569710	Mycobacterium ulcerans Agy99	4554126
YP_906888.1	CDS	MUL_3200	NC_008611.1	3569700	3570026	R	cytoplasmic protein; hypothetical protein	complement(3569700..3570026)	Mycobacterium ulcerans Agy99	4554127
YP_906889.1	CDS	MUL_3201	NC_008611.1	3570202	3571014	D	cytoplasmic protein; involved in transcriptional mechanism.; GntR family transcriptional regulator	3570202..3571014	Mycobacterium ulcerans Agy99	4554158
YP_906890.1	CDS	MUL_3202	NC_008611.1	3571023	3572045	D	cytoplasmic protein; oxidoreductase	3571023..3572045	Mycobacterium ulcerans Agy99	4554159
YP_906891.1	CDS	MUL_3203	NC_008611.1	3572106	3572912	D	cytoplasmic protein; hypothetical protein	3572106..3572912	Mycobacterium ulcerans Agy99	4554160
YP_906892.1	CDS	MUL_3204	NC_008611.1	3572873	3573919	R	Detected in the membrane fraction by proteomics; cytoplasmic protein; function unknown role in carbohydrate transport and metabolism; aldose 1-epimerase	complement(3572873..3573919)	Mycobacterium ulcerans Agy99	4554161
YP_906893.1	CDS	MUL_5114	NC_008611.1	3574204	3574650	D	cytoplasmic protein; hypothetical protein	3574204..3574650	Mycobacterium ulcerans Agy99	4554162
YP_906894.1	CDS	MUL_3206	NC_008611.1	3575202	3575537	D	secreted protein; hypothetical protein	3575202..3575537	Mycobacterium ulcerans Agy99	4554164
YP_906895.1	CDS	MUL_3207	NC_008611.1	3575588	3575866	D	secreted protein; hypothetical protein	3575588..3575866	Mycobacterium ulcerans Agy99	4554165
YP_906896.1	CDS	MUL_3208	NC_008611.1	3576126	3576878	D	membrane protein; this CDS encodes a 3-oxo-5-alpha-steroid 4- dehydrogenase. This family consists of 3-oxo-5-alpha- steroid 4-dehydrogenases. also known as steroid 5-alpha- reductase, the reaction catalysed by this enzyme is: 3-oxo- 5-alpha-steroid + acceptor <=> 3; hypothetical protein	3576126..3576878	Mycobacterium ulcerans Agy99	4554166
YP_906897.1	CDS	MUL_3210	NC_008611.1	3579606	3580364	R	membrane protein; hypothetical protein	complement(3579606..3580364)	Mycobacterium ulcerans Agy99	4554168
YP_906898.1	CDS	MUL_5090	NC_008611.1	3582380	3582832	R	cytoplasmic protein; hypothetical protein	complement(3582380..3582832)	Mycobacterium ulcerans Agy99	4554170
YP_906899.1	CDS	MUL_3212	NC_008611.1	3582901	3583386	D	cytoplasmic protein; function unknown, has HTH motif of a resolvase; hypothetical protein	3582901..3583386	Mycobacterium ulcerans Agy99	4554171
YP_906900.1	CDS	MUL_3213	NC_008611.1	3583518	3584852	R	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	complement(3583518..3584852)	Mycobacterium ulcerans Agy99	4554190
YP_906901.1	CDS	MUL_3214	NC_008611.1	3585032	3585781	R	cytoplasmic protein; TatD related DNAse. this family of proteins are related to a large superfamily of metalloenzymes. TatD, a member of this family has been shown experimentally to be a DNAse enzyme.; TatD family deoxyribonuclease	complement(3585032..3585781)	Mycobacterium ulcerans Agy99	4554191
YP_906902.1	CDS	MUL_3215	NC_008611.1	3585781	3587043	R	cytoplasmic protein; function unknown, contains PP-loop ATPase domain; hypothetical protein	complement(3585781..3587043)	Mycobacterium ulcerans Agy99	4554192
YP_906903.1	CDS	MUL_3216	NC_008611.1	3587040	3587912	R	cytoplasmic protein; hypothetical protein	complement(3587040..3587912)	Mycobacterium ulcerans Agy99	4554193
YP_906904.1	CDS	MUL_3217	NC_008611.1	3587912	3589537	R	Detected in the secreted protein fraction by proteomics.; membrane protein; P-loop ATPase	complement(3587912..3589537)	Mycobacterium ulcerans Agy99	4554194
YP_906905.1	CDS	MUL_3218	NC_008611.1	3589714	3590352	R	cytoplasmic protein; zinc metalloprotease	complement(3589714..3590352)	Mycobacterium ulcerans Agy99	4554195
YP_906906.1	CDS	MUL_3220	NC_008611.1	3593288	3594622	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	3593288..3594622	Mycobacterium ulcerans Agy99	4554197
YP_906907.1	CDS	MUL_3221	NC_008611.1	3595029	3596363	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(3595029..3596363)	Mycobacterium ulcerans Agy99	4554198
YP_906908.1	CDS	MUL_3224	NC_008611.1	3599809	3601143	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(3599809..3601143)	Mycobacterium ulcerans Agy99	4554201
YP_906909.1	CDS	MUL_3226	NC_008611.1	3601617	3602603	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3601617..3602603	Mycobacterium ulcerans Agy99	4554203
YP_906910.1	CDS	MUL_3229	NC_008611.1	3603946	3605280	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	3603946..3605280	Mycobacterium ulcerans Agy99	4554206
YP_906911.1	CDS	MUL_3230	NC_008611.1	3605346	3606950	D	cytoplasmic protein; Integration/excision of an unknown mycbacteriophage; prophage integrase	3605346..3606950	Mycobacterium ulcerans Agy99	4554207
YP_906912.1	CDS	engA	NC_008611.1	3607106	3608515	R	synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA	complement(3607106..3608515)	Mycobacterium ulcerans Agy99	4554209
YP_906913.1	CDS	cmk	NC_008611.1	3608512	3609240	R	Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase	complement(3608512..3609240)	Mycobacterium ulcerans Agy99	4554210
YP_906914.1	CDS	MUL_3234	NC_008611.1	3609311	3610072	R	cytoplasmic protein; possible role in ribosome biogenesis and protein translation; pseudouridylate synthase	complement(3609311..3610072)	Mycobacterium ulcerans Agy99	4554211
YP_906915.1	CDS	MUL_3235	NC_008611.1	3610072	3610779	R	cytoplasmic protein; transcriptional regulator	complement(3610072..3610779)	Mycobacterium ulcerans Agy99	4554212
YP_906916.1	CDS	MUL_3236	NC_008611.1	3610779	3611606	R	cytoplasmic protein; hypothetical protein	complement(3610779..3611606)	Mycobacterium ulcerans Agy99	4554213
YP_906917.1	CDS	MUL_3237	NC_008611.1	3611603	3612559	R	cytoplasmic protein; function unknown, possible role in chromosome partioning.; Soj family ATPase	complement(3611603..3612559)	Mycobacterium ulcerans Agy99	4554214
YP_906918.1	CDS	MUL_3238	NC_008611.1	3612640	3612960	R	cytoplasmic protein; hypothetical protein	complement(3612640..3612960)	Mycobacterium ulcerans Agy99	4554215
YP_906919.1	CDS	MUL_3239	NC_008611.1	3613546	3614250	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	3613546..3614250	Mycobacterium ulcerans Agy99	4554216
YP_906920.1	CDS	MUL_3240	NC_008611.1	3614275	3614592	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	3614275..3614592	Mycobacterium ulcerans Agy99	4554217
YP_906921.1	CDS	MUL_3241	NC_008611.1	3614716	3616050	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(3614716..3616050)	Mycobacterium ulcerans Agy99	4554218
YP_906922.1	CDS	MUL_3243	NC_008611.1	3618158	3618670	R	membrane protein; hypothetical protein	complement(3618158..3618670)	Mycobacterium ulcerans Agy99	4554220
YP_906923.1	CDS	MUL_3245	NC_008611.1	3622188	3623441	D	cytoplasmic protein; transcriptional regulator	3622188..3623441	Mycobacterium ulcerans Agy99	4554222
YP_906924.1	CDS	MUL_3246	NC_008611.1	3623457	3624212	R	Detected in the cytoplasmic and secreted fractions by proteomics.; secreted protein; hypothetical protein	complement(3623457..3624212)	Mycobacterium ulcerans Agy99	4554223
YP_906925.1	CDS	MUL_3247	NC_008611.1	3624487	3626082	D	PE_PGRS33; membrane protein; function unknown. seems to influence both cell surface interactions among mycobacteria and the interactions of bacteria with macrophages; PE-PGRS family protein	3624487..3626082	Mycobacterium ulcerans Agy99	4554224
YP_906926.1	CDS	snoP	NC_008611.1	3626109	3626705	R	with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT	complement(3626109..3626705)	Mycobacterium ulcerans Agy99	4554225
YP_906927.1	CDS	tesB2	NC_008611.1	3626713	3627558	R	cytoplasmic protein; function unknown, lipolytic enzyme involved in cellular metabolism. can hydrolyze a broad range of acyl- CoA thioesters.; acyl-CoA thioesterase II TesB2	complement(3626713..3627558)	Mycobacterium ulcerans Agy99	4554226
YP_906928.1	CDS	snzP	NC_008611.1	3627568	3628521	R	with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS	complement(3627568..3628521)	Mycobacterium ulcerans Agy99	4554227
YP_906929.1	CDS	MUL_3251	NC_008611.1	3628608	3629675	R	cytoplasmic protein; function unknown but contains a NUDIX domain; hypothetical protein	complement(3628608..3629675)	Mycobacterium ulcerans Agy99	4554228
YP_906930.1	CDS	pimA	NC_008611.1	3629675	3630871	R	membrane protein; involved in the first mannosylation step in phosphatidylinositol mannoside biosynthesis (transfer of mannose residues onto pi, leading to the synthesis of phosphatidylinositol monomannoside); alpha-mannosyltransferase PimA	complement(3629675..3630871)	Mycobacterium ulcerans Agy99	4554229
YP_906931.1	CDS	MUL_3253	NC_008611.1	3630799	3631749	R	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase	complement(3630799..3631749)	Mycobacterium ulcerans Agy99	4554230
YP_906932.1	CDS	pgsA1	NC_008611.1	3631746	3632450	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; catalyzes the transfer of a free alcohol (inositol) onto CDP-diacylglycerol. the product of this putative ORF seems be essential to mycobacteria [catalytic activity: CDP-diacylglycerol + myo-inositol = CMP + phosphatidyl 1D- myo-inositol]; pi synthase PgsA1	complement(3631746..3632450)	Mycobacterium ulcerans Agy99	4554231
YP_906933.1	CDS	MUL_3255	NC_008611.1	3632458	3633030	R	cytoplasmic protein; function unknown, but location and domain identity to hydrlases suggests it could be involved in lipid metabolism.; hypothetical protein	complement(3632458..3633030)	Mycobacterium ulcerans Agy99	4554232
YP_906934.1	CDS	thrS	NC_008611.1	3633033	3635108	R	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase	complement(3633033..3635108)	Mycobacterium ulcerans Agy99	4554233
YP_906935.1	CDS	MUL_3257	NC_008611.1	3635236	3635859	R	cytoplasmic protein; hypothetical protein	complement(3635236..3635859)	Mycobacterium ulcerans Agy99	4554234
YP_906936.1	CDS	MUL_3259	NC_008611.1	3636884	3637666	D	hypothetical protein	3636884..3637666	Mycobacterium ulcerans Agy99	4554236
YP_906937.1	CDS	MUL_3261	NC_008611.1	3638364	3638708	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(3638364..3638708)	Mycobacterium ulcerans Agy99	4554238
YP_906938.1	CDS	MUL_3262	NC_008611.1	3638721	3639146	R	membrane protein; hypothetical protein	complement(3638721..3639146)	Mycobacterium ulcerans Agy99	4554239
YP_906939.1	CDS	MUL_3263	NC_008611.1	3639143	3639814	R	cytoplasmic protein; transcriptional regulator	complement(3639143..3639814)	Mycobacterium ulcerans Agy99	4554240
YP_906940.1	CDS	fdxA_1	NC_008611.1	3639824	3640171	R	cytoplasmic protein; involved in electron transfer.; ferredoxin FdxA	complement(3639824..3640171)	Mycobacterium ulcerans Agy99	4554241
YP_906941.1	CDS	narK3	NC_008611.1	3640339	3641757	D	membrane protein; involved in excretion of nitrite produced by the dissimilatory reduction of nitrate. responsible for the translocation of the substrate across the membrane.; integral membrane nitrite extrusion protein NarK3	3640339..3641757	Mycobacterium ulcerans Agy99	4554242
YP_906942.1	CDS	MUL_3266	NC_008611.1	3641947	3642771	D	cytoplasmic protein; methylation of unknown substrate.; methyltransferase	3641947..3642771	Mycobacterium ulcerans Agy99	4554243
YP_906943.1	CDS	MUL_3267	NC_008611.1	3642901	3643794	D	cytoplasmic protein; hypothetical protein	3642901..3643794	Mycobacterium ulcerans Agy99	4554244
YP_906944.1	CDS	MUL_3269	NC_008611.1	3644638	3645816	R	membrane protein; hypothetical protein	complement(3644638..3645816)	Mycobacterium ulcerans Agy99	4554246
YP_906945.1	CDS	MUL_3271	NC_008611.1	3646641	3648068	R	membrane protein; hypothetical protein	complement(3646641..3648068)	Mycobacterium ulcerans Agy99	4554248
YP_906946.1	CDS	fadD11_1	NC_008611.1	3649594	3651459	D	cytoplasmic protein; involved in lipid metabolism.; long-chain-fatty-acid-CoA ligase, FadD11	3649594..3651459	Mycobacterium ulcerans Agy99	4554250
YP_906947.1	CDS	MUL_3275	NC_008611.1	3651521	3652645	D	cytoplasmic protein; hypothetical protein	3651521..3652645	Mycobacterium ulcerans Agy99	4554270
YP_906948.1	CDS	MUL_3276	NC_008611.1	3652745	3654055	D	cytoplasmic protein; function unknown but contains phosphoribosyltransferase domain; hypothetical protein	3652745..3654055	Mycobacterium ulcerans Agy99	4554271
YP_906949.1	CDS	MUL_3277	NC_008611.1	3654089	3654370	R	cytoplasmic protein; hypothetical protein	complement(3654089..3654370)	Mycobacterium ulcerans Agy99	4554272
YP_906950.1	CDS	MUL_3279	NC_008611.1	3655273	3656652	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; fatty-acid-CoA ligase	complement(3655273..3656652)	Mycobacterium ulcerans Agy99	4554274
YP_906951.1	CDS	dedA	NC_008611.1	3656884	3657540	D	membrane protein; transmembrane protein DedA	3656884..3657540	Mycobacterium ulcerans Agy99	4554275
YP_906952.1	CDS	MUL_3282	NC_008611.1	3658333	3658773	D	cytoplasmic protein; function unknown but contains identity with a pfam01740 STAS domain. the STAS (after sulphate transporter and antisigma factor antagonist) domain is found in the C terminal region of sulphate transporters and bacterial antisigma factor antagonists. it has been Sug; hypothetical protein	3658333..3658773	Mycobacterium ulcerans Agy99	4554277
YP_906953.1	CDS	MUL_3283	NC_008611.1	3658793	3659740	R	cytoplasmic protein; it catalyses the conversion of hydrogen peroxide to water and molecular oxygen and is thus involved in the protection of cells from the toxic effects of peroxides.; catalase	complement(3658793..3659740)	Mycobacterium ulcerans Agy99	4554278
YP_906954.1	CDS	MUL_3284	NC_008611.1	3659783	3660082	R	cytoplasmic protein; hypothetical protein	complement(3659783..3660082)	Mycobacterium ulcerans Agy99	4554279
YP_906955.1	CDS	MUL_3285	NC_008611.1	3660170	3660529	R	cytoplasmic protein; involved in transcriptional mechanism.; ArsR family transcriptional regulator	complement(3660170..3660529)	Mycobacterium ulcerans Agy99	4554280
YP_906956.1	CDS	cadI	NC_008611.1	3660631	3661101	D	cytoplasmic protein; function unknown, in M. tuberculosis H37Rv this gene induced by cadmium (see hotter et al., 2001); hypothetical protein	3660631..3661101	Mycobacterium ulcerans Agy99	4554281
YP_906957.1	CDS	MUL_3287	NC_008611.1	3661181	3661558	D	cytoplasmic protein; involved in transcriptional mechanism.; ArsR family transcriptional regulator	3661181..3661558	Mycobacterium ulcerans Agy99	4554282
YP_906958.1	CDS	MUL_3289	NC_008611.1	3663205	3664020	D	secreted protein; hypothetical protein	3663205..3664020	Mycobacterium ulcerans Agy99	4554284
YP_906959.1	CDS	MUL_3291	NC_008611.1	3665315	3666361	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3665315..3666361	Mycobacterium ulcerans Agy99	4554286
YP_906960.1	CDS	MUL_3292	NC_008611.1	3666718	3668553	D	membrane protein; PE-PGRS family protein	3666718..3668553	Mycobacterium ulcerans Agy99	4554287
YP_906961.1	CDS	MUL_3298	NC_008611.1	3670672	3672339	R	cytoplasmic protein; hypothetical protein	complement(3670672..3672339)	Mycobacterium ulcerans Agy99	4554293
YP_906962.1	CDS	MUL_3299	NC_008611.1	3672336	3673331	R	membrane protein; function unknown but has domain identity with lysophospholipases; hypothetical protein	complement(3672336..3673331)	Mycobacterium ulcerans Agy99	4554294
YP_906963.1	CDS	MUL_3300	NC_008611.1	3673385	3673708	R	Detected in the secreted fraction by 2D-LC-MS/MS.; secreted protein; hypothetical protein	complement(3673385..3673708)	Mycobacterium ulcerans Agy99	4554295
YP_906964.1	CDS	clpC2	NC_008611.1	3673817	3674560	D	cytoplasmic protein; function unknown, possibly hydrolyzes peptides and/or proteins in presence of ATP.; ATP-dependent protease ATP-binding subunit ClpC2	3673817..3674560	Mycobacterium ulcerans Agy99	4554296
YP_906965.1	CDS	MUL_3302	NC_008611.1	3674684	3675199	D	secreted protein; hypothetical protein	3674684..3675199	Mycobacterium ulcerans Agy99	4554297
YP_906966.1	CDS	MUL_3303	NC_008611.1	3675246	3675704	D	cytoplasmic protein; hypothetical protein	3675246..3675704	Mycobacterium ulcerans Agy99	4554317
YP_906967.1	CDS	MUL_3304	NC_008611.1	3675682	3676794	R	cytoplasmic protein; hypothetical protein	complement(3675682..3676794)	Mycobacterium ulcerans Agy99	4554318
YP_906968.1	CDS	ribD	NC_008611.1	3676816	3677598	D	cytoplasmic protein; involved in riboflavin biosynthesis (at the second and third steps) converts 2,5-diamino-6-(ribosylamino)- 4(3H)-pyrimidinone 5'-phosphate into 5-amino-6- (ribosylamino)-2,4(1H,3H)-pyrimidinedione 5'-phosphate [catalytic activity 1: 2,5-diamino-6-hydroxy-4-(5- phosphoribosylamino)pyrimidine + H(2)O = 5-amino-6-(5- phosphoribosylamino)uracil + NH(3)] [catalytic activity 2: 5-amino-6-(5-phosphoribitylamino)uracil + NADP(+) = 5- amino-6-(5-phosphoribosylamino)uracil + NADPH]; hypothetical protein	3676816..3677598	Mycobacterium ulcerans Agy99	4554319
YP_906969.1	CDS	MUL_3307	NC_008611.1	3679237	3680547	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; transmembrane protein	3679237..3680547	Mycobacterium ulcerans Agy99	4554321
YP_906970.1	CDS	MUL_3308	NC_008611.1	3680544	3680984	D	cytoplasmic protein; function unknown but contains a SelR domain. these family of reductases are involved in the reduction of methionine sulfoxides in proteins; hypothetical protein	3680544..3680984	Mycobacterium ulcerans Agy99	4554322
YP_906971.1	CDS	MUL_3309	NC_008611.1	3680992	3681741	R	cytoplasmic protein; methyltransferase	complement(3680992..3681741)	Mycobacterium ulcerans Agy99	4554323
YP_906972.1	CDS	MUL_3310	NC_008611.1	3681738	3682433	R	cytoplasmic protein; function unknown but contains identity to pfam06778, chlorite dismutase. this family contains chlorite dismutase enzymes of bacterial and archaeal origin. this enzyme catalyses the disproportionation of chlorite into chloride and oxygen. note that many family memb; hypothetical protein	complement(3681738..3682433)	Mycobacterium ulcerans Agy99	4554324
YP_906973.1	CDS	hemY	NC_008611.1	3682439	3683806	R	catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase	complement(3682439..3683806)	Mycobacterium ulcerans Agy99	4554325
YP_906974.1	CDS	hemE	NC_008611.1	3683803	3684864	R	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase	complement(3683803..3684864)	Mycobacterium ulcerans Agy99	4554326
YP_906975.1	CDS	echA15	NC_008611.1	3684987	3685796	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	3684987..3685796	Mycobacterium ulcerans Agy99	4554327
YP_906976.1	CDS	MUL_3314	NC_008611.1	3685935	3686516	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	3685935..3686516	Mycobacterium ulcerans Agy99	4554328
YP_906977.1	CDS	MUL_3315	NC_008611.1	3686518	3687825	D	cytoplasmic protein; hypothetical protein	3686518..3687825	Mycobacterium ulcerans Agy99	4554329
YP_906978.1	CDS	MUL_3317	NC_008611.1	3689324	3690370	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3689324..3690370	Mycobacterium ulcerans Agy99	4554331
YP_906979.1	CDS	MUL_3318	NC_008611.1	3690745	3692748	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; PE-PGRS family protein	3690745..3692748	Mycobacterium ulcerans Agy99	4554332
YP_906980.1	CDS	dxs1	NC_008611.1	3692791	3694704	R	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase	complement(3692791..3694704)	Mycobacterium ulcerans Agy99	4554445
YP_906981.1	CDS	MUL_3320	NC_008611.1	3694857	3695351	D	cytoplasmic protein; hypothetical protein	3694857..3695351	Mycobacterium ulcerans Agy99	4554446
YP_906982.1	CDS	arsA	NC_008611.1	3695407	3696696	D	membrane protein; thought to be involved in active transport of arsenical compounds across the membrane (export): arsenic resistance by an export mechanism. responsible for the translocation of the substrate across the membrane.; arsenic-transport integral membrane protein ArsA	3695407..3696696	Mycobacterium ulcerans Agy99	4554447
YP_906983.1	CDS	MUL_3325	NC_008611.1	3698848	3699513	R	membrane protein; thought to be involved in active transport of unidentified antibiotic across the membrane (export): antibiotic resistance by an export mechanism. responsible for the translocation of the substrate across the membrane.; antibiotic ABC transporter integral membrane protein	complement(3698848..3699513)	Mycobacterium ulcerans Agy99	4554450
YP_906984.1	CDS	MUL_3327	NC_008611.1	3700516	3701721	R	cytoplasmic protein; function unknown but domain identity suggests this CDS encodes TrmA, a protein related to tRNA (uracil-5-)- methyltransferases.; SAM-dependent methyltransferase	complement(3700516..3701721)	Mycobacterium ulcerans Agy99	4554452
YP_906985.1	CDS	MUL_3328	NC_008611.1	3701718	3703715	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown but domain identity suggests a role in amino acid transport; integral membrane alanine, valine and leucine rich protein	complement(3701718..3703715)	Mycobacterium ulcerans Agy99	4554453
YP_906986.1	CDS	ceoB	NC_008611.1	3703848	3704531	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; part of a potassium transport system.; TRK system potassium uptake protein CeoB	3703848..3704531	Mycobacterium ulcerans Agy99	4554454
YP_906987.1	CDS	ceoC	NC_008611.1	3704584	3705246	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS; cytoplasmic protein; part of a potassium transport system.; TRK system potassium uptake protein CeoC	3704584..3705246	Mycobacterium ulcerans Agy99	4554455
YP_906988.1	CDS	MUL_3331	NC_008611.1	3705466	3706137	R	membrane protein; integral membrane alanine and leucine rich protein	complement(3705466..3706137)	Mycobacterium ulcerans Agy99	4554456
YP_906989.1	CDS	MUL_3332	NC_008611.1	3706165	3706533	R	cytoplasmic protein; hypothetical protein	complement(3706165..3706533)	Mycobacterium ulcerans Agy99	4554457
YP_906990.1	CDS	MUL_3333	NC_008611.1	3706701	3707399	D	hypothetical protein	3706701..3707399	Mycobacterium ulcerans Agy99	4554458
YP_906991.1	CDS	MUL_3334	NC_008611.1	3707413	3708165	R	cytoplasmic protein; hypothetical protein	complement(3707413..3708165)	Mycobacterium ulcerans Agy99	4554459
YP_906992.1	CDS	dut	NC_008611.1	3708165	3708629	R	catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase	complement(3708165..3708629)	Mycobacterium ulcerans Agy99	4554460
YP_906993.1	CDS	MUL_3336	NC_008611.1	3708655	3709134	D	membrane protein; hypothetical protein	3708655..3709134	Mycobacterium ulcerans Agy99	4554461
YP_906994.1	CDS	MUL_3337	NC_008611.1	3709139	3709441	R	Detected in the secreted fraction by 23D-LC-MS/MS.; cytoplasmic protein; hypothetical protein	complement(3709139..3709441)	Mycobacterium ulcerans Agy99	4553172
YP_906995.1	CDS	MUL_3338	NC_008611.1	3709625	3710278	D	secreted protein; hypothetical protein	3709625..3710278	Mycobacterium ulcerans Agy99	4553173
YP_906996.1	CDS	suhB	NC_008611.1	3710284	3711153	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; in E. coli, SuhB mutation (SuhB2) enhances the synthesis of sigma(32) and suppresses temperature- sensitive growth of the RpoH15 mutant. may affect some step(S) of protein synthesis by facilitating the function of GroE or other heat shock proteins.; extragenic suppressor protein SuhB	complement(3710284..3711153)	Mycobacterium ulcerans Agy99	4553174
YP_906997.1	CDS	ppgK	NC_008611.1	3711275	3712069	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; catalyzes the phosphorylation of glucose using polyphosphate or ATP as the phosphoryl donor. GTP, UTP and CTP can replace ATP as phosphoryl donor [catalytic activity: (phosphate)(N) + d-glucose = (phosphate)(N-1) + d-glucose 6-phosphate]; polyphosphate glucokinase PpgK	3711275..3712069	Mycobacterium ulcerans Agy99	4553175
YP_906998.1	CDS	sigA	NC_008611.1	3712248	3713753	D	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor	3712248..3713753	Mycobacterium ulcerans Agy99	4553176
YP_906999.1	CDS	MUL_3344	NC_008611.1	3715933	3716367	D	cytoplasmic protein; function unknown but contains pfam01042 domain, endoribonuclease L-PSP. endoribonuclease active on single- stranded mRNA. inhibits protein synthesis by cleavage of mRNA. previously thought to inhibit protein synthesis initiation. this protein may also be involved I; hypothetical protein	3715933..3716367	Mycobacterium ulcerans Agy99	4553178
YP_907000.1	CDS	MUL_3345	NC_008611.1	3716295	3716675	R	cytoplasmic protein; hypothetical protein	complement(3716295..3716675)	Mycobacterium ulcerans Agy99	4553179
YP_907001.1	CDS	MUL_3346	NC_008611.1	3716802	3716987	D	cytoplasmic protein; hypothetical protein	3716802..3716987	Mycobacterium ulcerans Agy99	4553180
YP_907002.1	CDS	MUL_3347	NC_008611.1	3717053	3718027	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	3717053..3718027	Mycobacterium ulcerans Agy99	4553181
YP_907003.1	CDS	MUL_3348	NC_008611.1	3718028	3718276	R	cytoplasmic protein; hypothetical protein	complement(3718028..3718276)	Mycobacterium ulcerans Agy99	4553182
YP_907004.1	CDS	MUL_3349	NC_008611.1	3718313	3718741	D	membrane protein; hypothetical protein	3718313..3718741	Mycobacterium ulcerans Agy99	4553183
YP_907005.1	CDS	sigB	NC_008611.1	3718906	3719877	D	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma factors in this cluster are active during stationary phase; RNA polymerase sigma factor SigB	3718906..3719877	Mycobacterium ulcerans Agy99	4553184
YP_907006.1	CDS	ideR	NC_008611.1	3720029	3720721	D	cytoplasmic protein; transcriptional regulatory protein (repressor and activator), iron-binding repressor of siderophore biosynthesis and iron uptake. seems to regulate a variety of genes encoding a variety of proteins E.G. transporters, proteins involved in siderophore synthesis and iron storage, members of the PE/PPE family, enzymes involved in lipid metabolism, transcriptional regulatory proteins, etc. also activator of BfrA gene.; iron-dependent repressor and activator IdeR	3720029..3720721	Mycobacterium ulcerans Agy99	4553185
YP_907007.1	CDS	MUL_3354	NC_008611.1	3723054	3723371	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(3723054..3723371)	Mycobacterium ulcerans Agy99	4553188
YP_907008.1	CDS	MUL_3355	NC_008611.1	3723396	3724100	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(3723396..3724100)	Mycobacterium ulcerans Agy99	4553189
YP_907009.1	CDS	MUL_3356	NC_008611.1	3724695	3725522	R	membrane protein; function unknown but contains weak similarity to V8- like Glu-specific endopeptidases involved in amino acid transport and metabolism.; hypothetical protein	complement(3724695..3725522)	Mycobacterium ulcerans Agy99	4553190
YP_907010.1	CDS	MUL_3357	NC_008611.1	3725766	3726743	D	Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; hypothetical protein	3725766..3726743	Mycobacterium ulcerans Agy99	4553480
YP_907011.1	CDS	MUL_3358	NC_008611.1	3726792	3727817	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hydrolase	3726792..3727817	Mycobacterium ulcerans Agy99	4553481
YP_907012.1	CDS	MUL_3359	NC_008611.1	3727862	3728548	D	cytoplasmic protein; function unknown but contains identity to an epimerase involved in phenazine biosynthesis.; hypothetical protein	3727862..3728548	Mycobacterium ulcerans Agy99	4553482
YP_907013.1	CDS	MUL_3360	NC_008611.1	3728558	3729043	R	cytoplasmic protein; hypothetical protein	complement(3728558..3729043)	Mycobacterium ulcerans Agy99	4553483
YP_907014.1	CDS	nrdR	NC_008611.1	3729072	3729536	R	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); membrane protein; transcriptional regulator NrdR	complement(3729072..3729536)	Mycobacterium ulcerans Agy99	4553484
YP_907015.1	CDS	MUL_3362	NC_008611.1	3729699	3730241	R	membrane protein; in M. tuberculosis H37Rv thought to be regulated by LexA.; hypothetical protein	complement(3729699..3730241)	Mycobacterium ulcerans Agy99	4553485
YP_907016.1	CDS	lexA	NC_008611.1	3730550	3731284	D	Represses a number of genes involved in the response to DNA damage; LexA repressor	3730550..3731284	Mycobacterium ulcerans Agy99	4553486
YP_907017.1	CDS	MUL_3364	NC_008611.1	3731325	3733628	R	Also detected in the cytoplasmic and membrane fractions by LC-MS/MS.; membrane protein; hypothetical protein	complement(3731325..3733628)	Mycobacterium ulcerans Agy99	4553487
YP_907018.1	CDS	fadE20	NC_008611.1	3736509	3737669	R	cytoplasmic protein; function unknown, but involved in lipid metabolism.; acyl-CoA dehydrogenase FadE20	complement(3736509..3737669)	Mycobacterium ulcerans Agy99	4553490
YP_907019.1	CDS	hflX	NC_008611.1	3737813	3739147	R	cytoplasmic protein; possibly a GTPase, modulating activity of HflK and HflC proteins.; GTP-binding protein HflX	complement(3737813..3739147)	Mycobacterium ulcerans Agy99	4553491
YP_907020.1	CDS	dapF	NC_008611.1	3739374	3740246	R	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase	complement(3739374..3740246)	Mycobacterium ulcerans Agy99	4553492
YP_907021.1	CDS	miaA	NC_008611.1	3740251	3741195	R	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase	complement(3740251..3741195)	Mycobacterium ulcerans Agy99	4553493
YP_907022.1	CDS	MUL_3371	NC_008611.1	3741192	3741887	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; hypothetical protein	complement(3741192..3741887)	Mycobacterium ulcerans Agy99	4553494
YP_907023.1	CDS	MUL_3372	NC_008611.1	3741934	3742911	R	membrane protein; hypothetical protein	complement(3741934..3742911)	Mycobacterium ulcerans Agy99	4553495
YP_907024.1	CDS	pknH_2	NC_008611.1	3744494	3746299	D	membrane protein; involved in signal transduction (via phosphorylation) thought to be involved in arabinan metabolism, phosphorylating perhaps EmbR [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; Ser/Thr protein kinase	3744494..3746299	Mycobacterium ulcerans Agy99	4553497
YP_907025.1	CDS	MUL_3376	NC_008611.1	3746537	3747889	D	cytoplasmic protein; hypothetical protein	3746537..3747889	Mycobacterium ulcerans Agy99	4551962
YP_907026.1	CDS	MUL_3377	NC_008611.1	3747886	3748497	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(3747886..3748497)	Mycobacterium ulcerans Agy99	4551963
YP_907027.1	CDS	MUL_3378	NC_008611.1	3748494	3750092	R	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase	complement(3748494..3750092)	Mycobacterium ulcerans Agy99	4551964
YP_907028.1	CDS	recX	NC_008611.1	3750167	3750688	R	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX	complement(3750167..3750688)	Mycobacterium ulcerans Agy99	4551965
YP_907029.1	CDS	recA	NC_008611.1	3750654	3751694	R	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A	complement(3750654..3751694)	Mycobacterium ulcerans Agy99	4551966
YP_907030.1	CDS	MUL_3381	NC_008611.1	3751784	3752512	D	cytoplasmic protein; hypothetical protein	3751784..3752512	Mycobacterium ulcerans Agy99	4551967
YP_907031.1	CDS	MUL_3382	NC_008611.1	3752525	3752731	R	cytoplasmic protein; hypothetical protein	complement(3752525..3752731)	Mycobacterium ulcerans Agy99	4551968
YP_907032.1	CDS	MUL_3383	NC_008611.1	3752755	3753921	R	function unknown, probably involved in cellular metabolism.; glycosyl transferase family protein	complement(3752755..3753921)	Mycobacterium ulcerans Agy99	4551969
YP_907033.1	CDS	MUL_3384	NC_008611.1	3754017	3754457	D	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; function unknown but contains a LimA, limonene-1,2- epoxide hydrolase domain.; hypothetical protein	3754017..3754457	Mycobacterium ulcerans Agy99	4551970
YP_907034.1	CDS	MUL_3385	NC_008611.1	3754357	3755280	R	membrane protein; hypothetical protein	complement(3754357..3755280)	Mycobacterium ulcerans Agy99	4551971
YP_907035.1	CDS	MUL_3386	NC_008611.1	3755296	3756111	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown but domain identity to COG1842, PspA, phage shock protein a (IM30), suppresses sigma54- dependent transcription; hypothetical protein	complement(3755296..3756111)	Mycobacterium ulcerans Agy99	4551972
YP_907036.1	CDS	MUL_3387	NC_008611.1	3756272	3756598	R	cytoplasmic protein; possibly involved in transcriptional mechanism.; transcriptional regulatory protein	complement(3756272..3756598)	Mycobacterium ulcerans Agy99	4551973
YP_907037.1	CDS	pgsA3	NC_008611.1	3756738	3757406	R	cytoplasmic protein; involved in acidic phospholipid biosynthesis. this protein probably catalyzes the committed step to the synthesis of the acidic phospholipids [catalytic activity: CDP-diacylglycerol + glycerol-3-phosphate = CMP + 3-(3- phosphatidyl)-glycerol 1-phosphate]; PGP synthase PgsA3	complement(3756738..3757406)	Mycobacterium ulcerans Agy99	4551974
YP_907038.1	CDS	MUL_3389	NC_008611.1	3757392	3757916	D	catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis; N-acetylglutamate synthase	3757392..3757916	Mycobacterium ulcerans Agy99	4551975
YP_907039.1	CDS	ftsK	NC_008611.1	3757928	3760582	R	membrane protein; possibly involved in cell division processes; cell division transmembrane protein FtsK	complement(3757928..3760582)	Mycobacterium ulcerans Agy99	4551976
YP_907040.1	CDS	MUL_3391	NC_008611.1	3760717	3761031	D	Detected in the cytoplasmic and secreted fractions by 2D-LC-MS/MS.; cytoplasmic protein; hypothetical protein	3760717..3761031	Mycobacterium ulcerans Agy99	4551977
YP_907041.1	CDS	fabG	NC_008611.1	3761031	3761864	D	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	3761031..3761864	Mycobacterium ulcerans Agy99	4551978
YP_907042.1	CDS	MUL_3393	NC_008611.1	3761868	3762740	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; function unknown domain identity suggests this is a methylase involved in secondary metabolism (polyketides); O-methyltransferase	3761868..3762740	Mycobacterium ulcerans Agy99	4551979
YP_907043.1	CDS	MUL_3395	NC_008611.1	3763052	3763369	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(3763052..3763369)	Mycobacterium ulcerans Agy99	4553982
YP_907044.1	CDS	MUL_3396	NC_008611.1	3763394	3764098	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(3763394..3764098)	Mycobacterium ulcerans Agy99	4553983
YP_907045.1	CDS	MUL_3398	NC_008611.1	3765449	3766006	R	cytoplasmic protein; function unknown but domain identity suggests NADPH- dependent FMN reductase; hypothetical protein	complement(3765449..3766006)	Mycobacterium ulcerans Agy99	4553985
YP_907046.1	CDS	MUL_3399	NC_008611.1	3766037	3766699	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	3766037..3766699	Mycobacterium ulcerans Agy99	4553986
YP_907047.1	CDS	MUL_3400	NC_008611.1	3766740	3767615	R	cytoplasmic protein; function unknown, but similar to various oxidoreductases and enzymes involved in polyketides synthesis; short chain dehydrogenase	complement(3766740..3767615)	Mycobacterium ulcerans Agy99	4553987
YP_907048.1	CDS	MUL_3401	NC_008611.1	3767688	3768341	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(3767688..3768341)	Mycobacterium ulcerans Agy99	4553988
YP_907049.1	CDS	cyp136A2	NC_008611.1	3768452	3769930	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 136A2 Cyp136A2	3768452..3769930	Mycobacterium ulcerans Agy99	4553989
YP_907050.1	CDS	MUL_3403	NC_008611.1	3769958	3770488	R	cytoplasmic protein; hypothetical protein	complement(3769958..3770488)	Mycobacterium ulcerans Agy99	4553990
YP_907051.1	CDS	MUL_5116	NC_008611.1	3770659	3770952	D	cytoplasmic protein; hypothetical protein	3770659..3770952	Mycobacterium ulcerans Agy99	4553991
YP_907052.1	CDS	MUL_3404	NC_008611.1	3770994	3771956	R	cytoplasmic protein; hypothetical protein	complement(3770994..3771956)	Mycobacterium ulcerans Agy99	4553992
YP_907053.1	CDS	MUL_3406	NC_008611.1	3773567	3774670	R	cytoplasmic protein; function unknown, supposed involvement in lipid metabolism.; acetyl-CoA acetyltransferase	complement(3773567..3774670)	Mycobacterium ulcerans Agy99	4553994
YP_907054.1	CDS	MUL_3407	NC_008611.1	3774712	3775758	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3774712..3775758)	Mycobacterium ulcerans Agy99	4553995
YP_907055.1	CDS	MUL_3408	NC_008611.1	3776187	3776543	D	cytoplasmic protein; function unknown but potential nucleic-acid-binding domain; hypothetical protein	3776187..3776543	Mycobacterium ulcerans Agy99	4553996
YP_907056.1	CDS	MUL_3409	NC_008611.1	3776544	3777374	R	cytoplasmic protein; methyltransferase	complement(3776544..3777374)	Mycobacterium ulcerans Agy99	4553997
YP_907057.1	CDS	MUL_3410	NC_008611.1	3777540	3778214	D	cytoplasmic protein; transcriptional regulator	3777540..3778214	Mycobacterium ulcerans Agy99	4553998
YP_907058.1	CDS	fadE22	NC_008611.1	3778248	3780413	R	Detected in the membrane fraction by proteomics; cytoplasmic protein; function unknown, but involved in lipid metabolism.; acyl-CoA dehydrogenase FadE22	complement(3778248..3780413)	Mycobacterium ulcerans Agy99	4553999
YP_907059.1	CDS	MUL_3412	NC_008611.1	3780524	3781282	R	Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; function unknown, supposed involved in cellular metabolism.; short-chain type dehydrogenase/reductase	complement(3780524..3781282)	Mycobacterium ulcerans Agy99	4554090
YP_907060.1	CDS	ligB	NC_008611.1	3781391	3782932	D	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase	3781391..3782932	Mycobacterium ulcerans Agy99	4554091
YP_907061.1	CDS	MUL_3414	NC_008611.1	3782937	3783548	R	membrane protein; hypothetical protein	complement(3782937..3783548)	Mycobacterium ulcerans Agy99	4554092
YP_907062.1	CDS	MUL_3415	NC_008611.1	3783619	3784353	D	cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein	3783619..3784353	Mycobacterium ulcerans Agy99	4554093
YP_907063.1	CDS	MUL_5099	NC_008611.1	3785196	3785915	R	secreted protein; hypothetical protein	complement(3785196..3785915)	Mycobacterium ulcerans Agy99	4554095
YP_907064.1	CDS	MUL_3418	NC_008611.1	3787036	3788370	R	cytoplasmic protein; required for the transposition of the insertion element IS2606; transposase for IS2606	complement(3787036..3788370)	Mycobacterium ulcerans Agy99	4554097
YP_907065.1	CDS	MUL_3419	NC_008611.1	3788886	3789932	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3788886..3789932	Mycobacterium ulcerans Agy99	4554098
YP_907066.1	CDS	dnaK1	NC_008611.1	3792915	3794453	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; acts as a chaperone. involved in induction by stress conditions E.G. heat shock. possibly has an ATPase activity. in M. tuberculosis H37Rv it is regulated positively by SigH  and negatively by HspR.; chaperone protein DnaK1	3792915..3794453	Mycobacterium ulcerans Agy99	4554100
YP_907067.1	CDS	MUL_3423	NC_008611.1	3794478	3795308	D	cytoplasmic protein; short chain dehydrogenase	3794478..3795308	Mycobacterium ulcerans Agy99	4554101
YP_907068.1	CDS	MUL_3424	NC_008611.1	3795398	3796033	D	cytoplasmic protein; hypothetical protein	3795398..3796033	Mycobacterium ulcerans Agy99	4554102
YP_907069.1	CDS	mmr	NC_008611.1	3796102	3796425	D	membrane protein; involved in transport of multidrugs (tetraphenylphosphonium, erythromycin, ethidium bromide, acriflavine, safranin O, pyronin Y, etc) across the membrane (export): multidrugs resistance by an export mechanism (conferes resistance to toxic compounds by removing them for the cells) responsible for the translocation of the substrate across the membrane.; multidrug-transport integral membrane protein Mmr	3796102..3796425	Mycobacterium ulcerans Agy99	4554103
YP_907070.1	CDS	MUL_3426	NC_008611.1	3796422	3797000	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	3796422..3797000	Mycobacterium ulcerans Agy99	4554104
YP_907071.1	CDS	MUL_3427	NC_008611.1	3797028	3797405	D	cytoplasmic protein; hypothetical protein	3797028..3797405	Mycobacterium ulcerans Agy99	4554105
YP_907072.1	CDS	MUL_3428	NC_008611.1	3797492	3798052	D	hypothetical protein	3797492..3798052	Mycobacterium ulcerans Agy99	4554106
YP_907073.1	CDS	MUL_3429	NC_008611.1	3798205	3799989	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hydrolase	3798205..3799989	Mycobacterium ulcerans Agy99	4554107
YP_907074.1	CDS	putA_2	NC_008611.1	3799986	3801533	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; involved in 4-aminobutyrate (GabA) degradation pathway [catalytic activity: succinate semialdehyde + NAD(P)(+) + H(2)O = succinate + NAD(P)H]; succinate-semialdehyde dehydrogenase [NADP+] dependent, PutA_2	complement(3799986..3801533)	Mycobacterium ulcerans Agy99	4554479
YP_907075.1	CDS	MUL_3431	NC_008611.1	3801626	3802951	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; fatty-acid-CoA ligase	complement(3801626..3802951)	Mycobacterium ulcerans Agy99	4554480
YP_907076.1	CDS	MUL_3433	NC_008611.1	3804486	3805376	R	membrane protein; function unknown but contains Cdd pfam03982, DAGAT, diacylglycerol acyltransferase domain.; hypothetical protein	complement(3804486..3805376)	Mycobacterium ulcerans Agy99	4554482
YP_907077.1	CDS	MUL_3434	NC_008611.1	3805658	3806923	D	cytoplasmic protein; hypothetical protein	3805658..3806923	Mycobacterium ulcerans Agy99	4554483
YP_907078.1	CDS	MUL_3435	NC_008611.1	3806959	3808932	R	Good u/s rbs.; function unknown, probably involved in cellular metabolism.; oxidoreductase GMC-type	complement(3806959..3808932)	Mycobacterium ulcerans Agy99	4554484
YP_907079.1	CDS	MUL_3437	NC_008611.1	3809945	3810991	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3809945..3810991)	Mycobacterium ulcerans Agy99	4554486
YP_907080.1	CDS	MUL_3438	NC_008611.1	3811889	3813220	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(3811889..3813220)	Mycobacterium ulcerans Agy99	4554487
YP_907081.1	CDS	MUL_3440	NC_008611.1	3817755	3817907	D	cytoplasmic protein; function unknown but has domain similarity to quinoprotein amine dehydrogenases; hypothetical protein	3817755..3817907	Mycobacterium ulcerans Agy99	4554489
YP_907082.1	CDS	pgmA	NC_008611.1	3818414	3820045	R	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase	complement(3818414..3820045)	Mycobacterium ulcerans Agy99	4553259
YP_907083.1	CDS	MUL_3443	NC_008611.1	3820491	3821555	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3820491..3821555	Mycobacterium ulcerans Agy99	4553260
YP_907084.1	CDS	MUL_3446	NC_008611.1	3822332	3823438	D	cytoplasmic protein; hypothetical protein	3822332..3823438	Mycobacterium ulcerans Agy99	4553262
YP_907085.1	CDS	MUL_3447	NC_008611.1	3823449	3824072	R	cytoplasmic protein; hypothetical protein	complement(3823449..3824072)	Mycobacterium ulcerans Agy99	4553263
YP_907086.1	CDS	MUL_3448	NC_008611.1	3824086	3824964	R	cytoplasmic protein; oxidoreductase	complement(3824086..3824964)	Mycobacterium ulcerans Agy99	4553264
YP_907087.1	CDS	MUL_3449	NC_008611.1	3825006	3825362	R	cytoplasmic protein; hypothetical protein	complement(3825006..3825362)	Mycobacterium ulcerans Agy99	4553265
YP_907088.1	CDS	citE_2	NC_008611.1	3826718	3827653	R	cytoplasmic protein; interconversion of acetate and oxaloacetate from citrate [catalytic activity: citrate = acetate + oxaloacetate]; citrate lyase beta subunit, CitE_2	complement(3826718..3827653)	Mycobacterium ulcerans Agy99	4553267
YP_907089.1	CDS	MUL_3452	NC_008611.1	3827744	3829021	R	cytoplasmic protein; function unknown but domain identity suggests transcriptional regulator; hypothetical protein	complement(3827744..3829021)	Mycobacterium ulcerans Agy99	4553268
YP_907090.1	CDS	MUL_3453	NC_008611.1	3829213	3831030	D	membrane protein; hypothetical protein	3829213..3831030	Mycobacterium ulcerans Agy99	4553269
YP_907091.1	CDS	MUL_3456	NC_008611.1	3834290	3834739	D	cytoplasmic protein; hypothetical protein	3834290..3834739	Mycobacterium ulcerans Agy99	4553272
YP_907092.1	CDS	MUL_3457	NC_008611.1	3834732	3836543	D	cytoplasmic protein; function unknown but domain homology to arylsulfatase a ( AslA )and related enzymes.; hydrolase	3834732..3836543	Mycobacterium ulcerans Agy99	4553273
YP_907093.1	CDS	MUL_3458	NC_008611.1	3837162	3837989	R	cytoplasmic protein; oxidoreductase	complement(3837162..3837989)	Mycobacterium ulcerans Agy99	4553275
YP_907094.1	CDS	MUL_3459	NC_008611.1	3837998	3838396	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(3837998..3838396)	Mycobacterium ulcerans Agy99	4553276
YP_907095.1	CDS	MUL_3460	NC_008611.1	3838476	3839939	D	cytoplasmic protein; hypothetical protein	3838476..3839939	Mycobacterium ulcerans Agy99	4552758
YP_907096.1	CDS	MUL_3461	NC_008611.1	3840320	3840997	D	cytoplasmic protein; function unknown, first 70 aa missing WRT to orthologues; hypothetical protein	3840320..3840997	Mycobacterium ulcerans Agy99	4552759
YP_907097.1	CDS	MUL_3463	NC_008611.1	3842776	3843420	D	secreted protein; hypothetical protein	3842776..3843420	Mycobacterium ulcerans Agy99	4552761
YP_907098.1	CDS	MUL_3464	NC_008611.1	3843474	3844241	D	cytoplasmic protein; putative regulatory protein	3843474..3844241	Mycobacterium ulcerans Agy99	4552762
YP_907099.1	CDS	MUL_3466	NC_008611.1	3845094	3845945	R	membrane protein; hypothetical protein	complement(3845094..3845945)	Mycobacterium ulcerans Agy99	4552764
YP_907100.1	CDS	MUL_3467	NC_008611.1	3846293	3847339	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3846293..3847339	Mycobacterium ulcerans Agy99	4552765
YP_907101.1	CDS	miaA_1	NC_008611.1	3848339	3849283	D	cytoplasmic protein; catalyzes the first step in the biosynthesis of 2- methylthio-N6-(delta(2)-isopentenyl)-adenosine adjacent to the anticodon of several tRNA species [catalytic activity: isopentenyl diphosphate + tRNA = pyrophosphate + tRNA containing 6-isopentenyladenosine]; tRNA delta(2)-isopentenylpyrophosphate transferase MiaA	3848339..3849283	Mycobacterium ulcerans Agy99	4552767
YP_907102.1	CDS	MUL_3470	NC_008611.1	3849370	3850350	D	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase	3849370..3850350	Mycobacterium ulcerans Agy99	4552768
YP_907103.1	CDS	MUL_3472	NC_008611.1	3851720	3852922	R	cytoplasmic protein; NADP-dependent oxidoreductase	complement(3851720..3852922)	Mycobacterium ulcerans Agy99	4552770
YP_907104.1	CDS	MUL_3474	NC_008611.1	3853907	3855130	R	cytoplasmic protein; dehydrogenase	complement(3853907..3855130)	Mycobacterium ulcerans Agy99	4552772
YP_907105.1	CDS	MUL_3475	NC_008611.1	3855177	3855653	D	cytoplasmic protein; transcriptional regulatory protein	3855177..3855653	Mycobacterium ulcerans Agy99	4552773
YP_907106.1	CDS	MUL_3476	NC_008611.1	3855911	3857050	D	secreted protein; hypothetical protein	3855911..3857050	Mycobacterium ulcerans Agy99	4552774
YP_907107.1	CDS	MUL_3477	NC_008611.1	3857064	3857552	R	secreted protein; hypothetical protein	complement(3857064..3857552)	Mycobacterium ulcerans Agy99	4552775
YP_907108.1	CDS	MUL_3478	NC_008611.1	3857853	3858095	R	secreted protein; hypothetical protein	complement(3857853..3858095)	Mycobacterium ulcerans Agy99	4552250
YP_907109.1	CDS	MUL_3479	NC_008611.1	3858242	3859090	D	cytoplasmic protein; hypothetical protein	3858242..3859090	Mycobacterium ulcerans Agy99	4552251
YP_907110.1	CDS	MUL_3480	NC_008611.1	3859370	3859987	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	3859370..3859987	Mycobacterium ulcerans Agy99	4552252
YP_907111.1	CDS	MUL_3481	NC_008611.1	3860072	3860416	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	3860072..3860416	Mycobacterium ulcerans Agy99	4552253
YP_907112.1	CDS	MUL_3483	NC_008611.1	3862725	3863171	R	cytoplasmic protein; function unknown but has domain similarity to predicted flavin-nucleotide-binding proteins; hypothetical protein	complement(3862725..3863171)	Mycobacterium ulcerans Agy99	4552255
YP_907113.1	CDS	glsA	NC_008611.1	3863241	3864203	R	catalyzes the formation of glutamate from glutamine; glutaminase	complement(3863241..3864203)	Mycobacterium ulcerans Agy99	4552256
YP_907114.1	CDS	MUL_3486	NC_008611.1	3864892	3865938	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3864892..3865938)	Mycobacterium ulcerans Agy99	4552258
YP_907115.1	CDS	MUL_3487	NC_008611.1	3866391	3867725	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(3866391..3867725)	Mycobacterium ulcerans Agy99	4552259
YP_907116.1	CDS	MUL_3490	NC_008611.1	3869647	3870588	D	cytoplasmic protein; function unknown but contains lysophospholipase domain; hypothetical protein	3869647..3870588	Mycobacterium ulcerans Agy99	4552263
YP_907117.1	CDS	MUL_3491	NC_008611.1	3870998	3871432	D	cytoplasmic protein; function unknown, contains predicted nucleic acid- binding pin domain; hypothetical protein	3870998..3871432	Mycobacterium ulcerans Agy99	4552264
YP_907118.1	CDS	MUL_3492	NC_008611.1	3871628	3872032	R	membrane protein; hypothetical protein	complement(3871628..3872032)	Mycobacterium ulcerans Agy99	4552265
YP_907119.1	CDS	wag31	NC_008611.1	3872117	3872911	R	Detected in the membrane and the cytoplamic fractions  by proteomics.; secreted protein; function unknown but corresponds to antigen 84 of mycobacterium tuberculosis (Wag31) (see hermans et al., 1995) predicted to contain significant amount of coiled coil structure.; secreted antigen Wag31	complement(3872117..3872911)	Mycobacterium ulcerans Agy99	4550964
YP_907120.1	CDS	MUL_3494	NC_008611.1	3873168	3873458	R	membrane protein; hypothetical protein	complement(3873168..3873458)	Mycobacterium ulcerans Agy99	4550965
YP_907121.1	CDS	MUL_3495	NC_008611.1	3873636	3874307	R	cytoplasmic protein; hypothetical protein	complement(3873636..3874307)	Mycobacterium ulcerans Agy99	4550966
YP_907122.1	CDS	MUL_3496	NC_008611.1	3874372	3875148	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(3874372..3875148)	Mycobacterium ulcerans Agy99	4550967
YP_907123.1	CDS	yfiH	NC_008611.1	3875154	3875942	R	Detected in the membrane fraction by proteomics.; membrane protein; membrane protein YfiH	complement(3875154..3875942)	Mycobacterium ulcerans Agy99	4550968
YP_907124.1	CDS	ftsZ	NC_008611.1	3875953	3877116	R	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ	complement(3875953..3877116)	Mycobacterium ulcerans Agy99	4550969
YP_907125.1	CDS	ftsQ	NC_008611.1	3877363	3878319	R	cytoplasmic protein; this protein may be involved in septum formation (by similarity); cell division protein FtsQ	complement(3877363..3878319)	Mycobacterium ulcerans Agy99	4550970
YP_907126.1	CDS	murC	NC_008611.1	3878316	3879782	R	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase	complement(3878316..3879782)	Mycobacterium ulcerans Agy99	4550971
YP_907127.1	CDS	murG	NC_008611.1	3879779	3880978	R	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	complement(3879779..3880978)	Mycobacterium ulcerans Agy99	4550972
YP_907128.1	CDS	ftsW	NC_008611.1	3880975	3882606	R	membrane protein; function unknown function in cell division; FtsW-like protein FtsW	complement(3880975..3882606)	Mycobacterium ulcerans Agy99	4550973
YP_907129.1	CDS	murD	NC_008611.1	3882613	3884079	R	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase	complement(3882613..3884079)	Mycobacterium ulcerans Agy99	4550974
YP_907130.1	CDS	mraY	NC_008611.1	3884081	3885160	R	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase	complement(3884081..3885160)	Mycobacterium ulcerans Agy99	4550975
YP_907131.1	CDS	murF	NC_008611.1	3885157	3886734	R	Detected in the membrane fraction by proteomics.; membrane protein; involved in cell wall formation; peptidoglycan biosynthesis.; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase MurF	complement(3885157..3886734)	Mycobacterium ulcerans Agy99	4550976
YP_907132.1	CDS	murE	NC_008611.1	3886731	3888410	R	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase	complement(3886731..3888410)	Mycobacterium ulcerans Agy99	4550977
YP_907133.1	CDS	MUL_3507	NC_008611.1	3888660	3890477	R	membrane protein; PE-PGRS family protein	complement(3888660..3890477)	Mycobacterium ulcerans Agy99	4550978
YP_907134.1	CDS	pbpB	NC_008611.1	3890728	3892803	R	membrane protein; involved in peptidoglycan biosynthesis.; penicillin-binding membrane protein PbpB	complement(3890728..3892803)	Mycobacterium ulcerans Agy99	4550979
YP_907135.1	CDS	MUL_3509	NC_008611.1	3892800	3894071	R	membrane protein; proline rich membrane protein	complement(3892800..3894071)	Mycobacterium ulcerans Agy99	4550980
YP_907136.1	CDS	mraW	NC_008611.1	3894068	3895255	R	cytoplasmic protein; S-adenosyl-methyltransferase MraW	complement(3894068..3895255)	Mycobacterium ulcerans Agy99	4550981
YP_907137.1	CDS	MUL_3511	NC_008611.1	3895257	3895688	R	MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ	complement(3895257..3895688)	Mycobacterium ulcerans Agy99	4552658
YP_907138.1	CDS	MUL_3512	NC_008611.1	3896097	3896501	R	membrane protein; hypothetical protein	complement(3896097..3896501)	Mycobacterium ulcerans Agy99	4552659
YP_907139.1	CDS	MUL_3513	NC_008611.1	3896804	3897442	D	cytoplasmic protein; function unknown but contains acyl-CoA N- acyltransferase superfamily domain; hypothetical protein	3896804..3897442	Mycobacterium ulcerans Agy99	4552660
YP_907140.1	CDS	lppM	NC_008611.1	3897592	3898239	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipoprotein LppM	3897592..3898239	Mycobacterium ulcerans Agy99	4552661
YP_907141.1	CDS	MUL_3515	NC_008611.1	3898285	3899181	R	cytoplasmic protein; hypothetical protein	complement(3898285..3899181)	Mycobacterium ulcerans Agy99	4552662
YP_907142.1	CDS	idsA2	NC_008611.1	3899503	3900525	D	Detected in the membrane fraction by proteomics.; cytoplasmic protein; involved in lipid biosynthesis.; geranylgeranyl pyrophosphate synthase	3899503..3900525	Mycobacterium ulcerans Agy99	4552663
YP_907143.1	CDS	MUL_3517	NC_008611.1	3900662	3902110	D	membrane protein; hypothetical protein	3900662..3902110	Mycobacterium ulcerans Agy99	4552664
YP_907144.1	CDS	MUL_3518	NC_008611.1	3902148	3902552	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; regulatory protein	complement(3902148..3902552)	Mycobacterium ulcerans Agy99	4552665
YP_907145.1	CDS	pknL	NC_008611.1	3902643	3903938	D	membrane protein; involved in signal transduction (via phosphorylation); Ser/Thr protein kinase	3902643..3903938	Mycobacterium ulcerans Agy99	4552666
YP_907146.1	CDS	MUL_3520	NC_008611.1	3904610	3905941	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	3904610..3905941	Mycobacterium ulcerans Agy99	4552667
YP_907147.1	CDS	MUL_3522	NC_008611.1	3907143	3908198	R	cytoplasmic protein; HMGR is a tightly regulated enzyme, which catalyzes the synthesis of coenzyme a and mevalonate in isoprenoid synthesis. in mammals, this is the rate limiting committed step in cholesterol biosynthesis. bacteria, such as pseudomonas mevalonii, which rely solely on mevalonate for their carbon source, catalyze the reverse reaction, using an NAD-dependent HMGR to deacetylate mevalonate into 3- hydroxy-3-methylglutaryl-CoA.; hydroxymethylglutaryl-coenzyme a (HMG-CoA) reductase	complement(3907143..3908198)	Mycobacterium ulcerans Agy99	4552669
YP_907148.1	CDS	MUL_3523	NC_008611.1	3908222	3909334	R	membrane protein; part of the mevalonate pathway for isoprenoid synthesis. possible regulatory role in mevalonate metabolism. converts (R)-5-phosphomevalonate to (R)-5- diphosphomevalonate.; phosphomevalonate kinase	complement(3908222..3909334)	Mycobacterium ulcerans Agy99	4552670
YP_907149.1	CDS	MUL_3524	NC_008611.1	3909331	3910341	R	cytoplasmic protein; key enzyme in isoprenoid synthesis. converts (R)-5- diphosphomevalonate to phosphate + isopentenyl diphosphate +  CO(2); diphosphomevalonate decarboxylase	complement(3909331..3910341)	Mycobacterium ulcerans Agy99	4552671
YP_907150.1	CDS	erg12	NC_008611.1	3910338	3911417	R	cytoplasmic protein; converts (R)-mevalonate to (R)-5-phosphomevalonate (ATP dependant); mevalonate kinase, Erg12	complement(3910338..3911417)	Mycobacterium ulcerans Agy99	4552672
YP_907151.1	CDS	MUL_3527	NC_008611.1	3911690	3912736	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(3911690..3912736)	Mycobacterium ulcerans Agy99	4552674
YP_907152.1	CDS	fabH_1	NC_008611.1	3916481	3917482	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in fatty acid biosynthesis. catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl- acp. kas III catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. possesses both acetoacetyl-acp synthase and acetyl transacylase activities [catalytic activity: acyl- [acyl-carrier protein] + malonyl-[acyl-carrier protein] = 3-oxoacyl-[acyl-carrier protein] + CO2 + [acyl-carrier protein]]; 3-oxoacyl-ACP synthase	3916481..3917482	Mycobacterium ulcerans Agy99	4553928
YP_907153.1	CDS	aroG_1	NC_008611.1	3919269	3920657	R	cytoplasmic protein; involved in chorismate biosynthesis; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	complement(3919269..3920657)	Mycobacterium ulcerans Agy99	4553930
YP_907154.1	CDS	MUL_3534	NC_008611.1	3920706	3921185	R	cytoplasmic protein; hypothetical protein	complement(3920706..3921185)	Mycobacterium ulcerans Agy99	4553931
YP_907155.1	CDS	MUL_3535	NC_008611.1	3921169	3922008	R	membrane protein; hypothetical protein	complement(3921169..3922008)	Mycobacterium ulcerans Agy99	4553932
YP_907156.1	CDS	MUL_3536	NC_008611.1	3922153	3923436	D	membrane protein; hypothetical protein	3922153..3923436	Mycobacterium ulcerans Agy99	4553933
YP_907157.1	CDS	MUL_3537	NC_008611.1	3923437	3924168	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; transfer of fatty acyl groups; 1-acylglycerol-3-phosphate O-acyltransferase	complement(3923437..3924168)	Mycobacterium ulcerans Agy99	4553934
YP_907158.1	CDS	MUL_3538	NC_008611.1	3924256	3924645	R	cytoplasmic protein; hypothetical protein	complement(3924256..3924645)	Mycobacterium ulcerans Agy99	4553935
YP_907159.1	CDS	MUL_3539	NC_008611.1	3924642	3925793	R	cytoplasmic protein; function unknown but domain identity suggests it is an anion-transporting ATPase.; hypothetical protein	complement(3924642..3925793)	Mycobacterium ulcerans Agy99	4553936
YP_907160.1	CDS	MUL_3540	NC_008611.1	3925913	3926347	R	cytoplasmic protein; hypothetical protein	complement(3925913..3926347)	Mycobacterium ulcerans Agy99	4553937
YP_907161.1	CDS	MUL_3541	NC_008611.1	3926444	3926833	R	cytoplasmic protein; hypothetical protein	complement(3926444..3926833)	Mycobacterium ulcerans Agy99	4553938
YP_907162.1	CDS	fadD15	NC_008611.1	3927041	3928843	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, but involved in lipid metabolism.; long-chain-fatty-acid-CoA ligase FadD15	3927041..3928843	Mycobacterium ulcerans Agy99	4553939
YP_907163.1	CDS	MUL_3543	NC_008611.1	3928911	3930068	R	cytoplasmic protein; glycosyltransferase	complement(3928911..3930068)	Mycobacterium ulcerans Agy99	4553940
YP_907164.1	CDS	MUL_3545	NC_008611.1	3931010	3932176	R	secreted protein; hypothetical protein	complement(3931010..3932176)	Mycobacterium ulcerans Agy99	4553942
YP_907165.1	CDS	MUL_3546	NC_008611.1	3932364	3932618	R	cytoplasmic protein; hypothetical protein	complement(3932364..3932618)	Mycobacterium ulcerans Agy99	4553943
YP_907166.1	CDS	trpD	NC_008611.1	3934890	3935993	R	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase	complement(3934890..3935993)	Mycobacterium ulcerans Agy99	4554545
YP_907167.1	CDS	ctaE	NC_008611.1	3936144	3936755	D	cytoplasmic protein; thought to be involved in aerobic respiration.; cytochrome C oxidase (subunit III) CtaE	3936144..3936755	Mycobacterium ulcerans Agy99	4554546
YP_907168.1	CDS	qcrC	NC_008611.1	3936808	3937713	D	membrane protein; plays a role in aerobic respiration; ubiquinol-cytochrome C reductase QcrC	3936808..3937713	Mycobacterium ulcerans Agy99	4554547
YP_907169.1	CDS	qcrA	NC_008611.1	3937710	3938894	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS) Also detected in the cytoplasmic fraction by 2D- LC-MS/MS; membrane protein; role in respiration; Rieske iron-sulfur protein QcrA	3937710..3938894	Mycobacterium ulcerans Agy99	4554548
YP_907170.1	CDS	qcrB	NC_008611.1	3938891	3940576	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; role in respiration; ubiquinol-cytochrome C reductase QcrB	3938891..3940576	Mycobacterium ulcerans Agy99	4554549
YP_907171.1	CDS	MUL_3554	NC_008611.1	3941022	3941660	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	complement(3941022..3941660)	Mycobacterium ulcerans Agy99	4554550
YP_907172.1	CDS	mmpS3	NC_008611.1	3941660	3942607	R	membrane protein; membrane protein MmpS3	complement(3941660..3942607)	Mycobacterium ulcerans Agy99	4554551
YP_907173.1	CDS	MUL_3556	NC_008611.1	3942790	3943209	R	cytoplasmic protein; integral membrane protein	complement(3942790..3943209)	Mycobacterium ulcerans Agy99	4554552
YP_907174.1	CDS	ctaC	NC_008611.1	3943218	3944321	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in aerobic respiration. subunit I and II form the functional core of the enzyme complex. electrons originating in cytochrome C are transferred via HemE A and Cu(A) to the binuclear center formed by HemE A3 and Cu(B) (by similarity); transmembrane cytochrome C oxidase (subunit II) CtaC	complement(3943218..3944321)	Mycobacterium ulcerans Agy99	4554553
YP_907175.1	CDS	asnB	NC_008611.1	3944718	3946712	D	cytoplasmic protein; asparagine biosynthesis; asparagine synthetase AsnB	3944718..3946712	Mycobacterium ulcerans Agy99	4554554
YP_907176.1	CDS	cbhK	NC_008611.1	3946725	3947699	R	Detected in the cytoplamic fraction by LCMSMS. Also detected in the membrane fraction by proteomics (2D-LC- MS/MS); cytoplasmic protein; phosphorylation of carbohydrates; carbohydrate kinase CbhK	complement(3946725..3947699)	Mycobacterium ulcerans Agy99	4554555
YP_907177.1	CDS	MUL_3560	NC_008611.1	3947938	3948579	D	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; hypothetical protein	3947938..3948579	Mycobacterium ulcerans Agy99	4554556
YP_907178.1	CDS	MUL_3561	NC_008611.1	3948620	3948976	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown but domain identity shows similarity to the HesB gene (function unknown) but which is expressed only under nitrogen fixation conditions.; hypothetical protein	complement(3948620..3948976)	Mycobacterium ulcerans Agy99	4554557
YP_907179.1	CDS	MUL_3562	NC_008611.1	3949063	3950139	R	membrane protein; function unknown role in carbohydrate transport and metabolism; glycerate kinase	complement(3949063..3950139)	Mycobacterium ulcerans Agy99	4554558
YP_907180.1	CDS	MUL_3563	NC_008611.1	3950302	3951006	D	membrane protein; transmembrane protein	3950302..3951006	Mycobacterium ulcerans Agy99	4554559
YP_907181.1	CDS	cobU	NC_008611.1	3951035	3951595	D	cytoplasmic protein; involved in cobalamin biosynthesis.; bifunctional cobalamin biosynthesis protein CobU	3951035..3951595	Mycobacterium ulcerans Agy99	4554560
YP_907182.1	CDS	cobT	NC_008611.1	3951592	3952668	D	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	3951592..3952668	Mycobacterium ulcerans Agy99	4554561
YP_907183.1	CDS	cobS	NC_008611.1	3952665	3953423	D	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase	3952665..3953423	Mycobacterium ulcerans Agy99	4554562
YP_907184.1	CDS	MUL_3567	NC_008611.1	3953656	3954282	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(3953656..3954282)	Mycobacterium ulcerans Agy99	4553401
YP_907185.1	CDS	MUL_3568	NC_008611.1	3954352	3954702	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(3954352..3954702)	Mycobacterium ulcerans Agy99	4553402
YP_907186.1	CDS	MUL_3569	NC_008611.1	3955072	3956484	D	membrane protein; function unknown but domain identity with chloride channel superfamily; hypothetical protein	3955072..3956484	Mycobacterium ulcerans Agy99	4553403
YP_907187.1	CDS	ilvE	NC_008611.1	3956476	3957582	R	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase	complement(3956476..3957582)	Mycobacterium ulcerans Agy99	4553404
YP_907188.1	CDS	gcvT	NC_008611.1	3957636	3958739	R	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T	complement(3957636..3958739)	Mycobacterium ulcerans Agy99	4553405
YP_907189.1	CDS	pepB	NC_008611.1	3959940	3961499	D	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase	3959940..3961499	Mycobacterium ulcerans Agy99	4553407
YP_907190.1	CDS	ephD	NC_008611.1	3961962	3963746	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; thought to be involved in detoxification reactions following oxidative damage to lipids.; short chain dehydrogenase	complement(3961962..3963746)	Mycobacterium ulcerans Agy99	4553408
YP_907191.1	CDS	sucB	NC_008611.1	3963975	3965741	D	Detected in the cytoplasmic, the extracellular matrix, and the membrane fraction by proteomics.; cytoplasmic protein; involved in tricarboxylic acid cycle; converts 2- oxoglutarate to succinyl-CoA and CO2; dihydrolipoamide acetyltransferase	3963975..3965741	Mycobacterium ulcerans Agy99	4553409
YP_907192.1	CDS	MUL_3576	NC_008611.1	3965746	3966657	D	function unknown but domain identity with NAD dependent sugar epimerases; hypothetical protein	3965746..3966657	Mycobacterium ulcerans Agy99	4553410
YP_907193.1	CDS	MUL_3577	NC_008611.1	3966443	3967684	R	membrane protein; probably involved in active transport of substrate across the membrane (export)  responsible for energy coupling to the transport system.; ABC transporter ATP-binding protein	complement(3966443..3967684)	Mycobacterium ulcerans Agy99	4553411
YP_907194.1	CDS	MUL_3579	NC_008611.1	3969592	3970638	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3969592..3970638	Mycobacterium ulcerans Agy99	4553413
YP_907195.1	CDS	MUL_3581	NC_008611.1	3971923	3972276	R	cytoplasmic protein; DNA integration. this sequence contains a DNA breaking-rejoining catalytic core found in phage integrase genes.; phage-related integrase	complement(3971923..3972276)	Mycobacterium ulcerans Agy99	4553366
YP_907196.1	CDS	MUL_3582	NC_008611.1	3972570	3973187	R	membrane protein; hypothetical protein	complement(3972570..3973187)	Mycobacterium ulcerans Agy99	4553367
YP_907197.1	CDS	MUL_5087	NC_008611.1	3973525	3973791	R	cytoplasmic protein; hypothetical protein	complement(3973525..3973791)	Mycobacterium ulcerans Agy99	4553368
YP_907198.1	CDS	MUL_3584	NC_008611.1	3974228	3975274	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3974228..3975274	Mycobacterium ulcerans Agy99	4553369
YP_907199.1	CDS	MUL_3585	NC_008611.1	3975756	3976088	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	3975756..3976088	Mycobacterium ulcerans Agy99	4553371
YP_907200.1	CDS	MUL_3586	NC_008611.1	3976103	3976528	D	membrane protein; hypothetical protein	3976103..3976528	Mycobacterium ulcerans Agy99	4553372
YP_907201.1	CDS	lpqL	NC_008611.1	3976661	3978172	D	membrane protein; function unknown, hydrolyzes peptides and/or proteins.; lipoprotein aminopeptidase LpqL	3976661..3978172	Mycobacterium ulcerans Agy99	4553373
YP_907202.1	CDS	lpqM	NC_008611.1	3979755	3981248	D	secreted protein; function unknown, possibly hydrolyzes peptides and/or proteins.; lipoprotein peptidase LpqM	3979755..3981248	Mycobacterium ulcerans Agy99	4553375
YP_907203.1	CDS	MUL_3590	NC_008611.1	3981279	3984515	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; function unknown, but may be involved in efflux system (probably sugar or drug transport); transmembrane transport protein	complement(3981279..3984515)	Mycobacterium ulcerans Agy99	4553376
YP_907204.1	CDS	MUL_3591	NC_008611.1	3985251	3986297	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3985251..3986297	Mycobacterium ulcerans Agy99	4553377
YP_907205.1	CDS	MUL_3593	NC_008611.1	3988189	3989235	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	3988189..3989235	Mycobacterium ulcerans Agy99	4553379
YP_907206.1	CDS	MUL_3594	NC_008611.1	3989272	3990798	D	cytoplasmic protein; function unknown but contains a N-term CheY-like response regulator receiver domain and C-term adenylyl/guanylyl cyclase catalytic domain.; adenylylate/guanylate cyclase	3989272..3990798	Mycobacterium ulcerans Agy99	4553380
YP_907207.1	CDS	MUL_3595	NC_008611.1	3990791	3991105	R	membrane protein; hypothetical protein	complement(3990791..3991105)	Mycobacterium ulcerans Agy99	4553381
YP_907208.1	CDS	MUL_3596	NC_008611.1	3991153	3991377	R	membrane protein; hypothetical protein	complement(3991153..3991377)	Mycobacterium ulcerans Agy99	4553297
YP_907209.1	CDS	MUL_3597	NC_008611.1	3991479	3992822	D	cytoplasmic protein; function unknown but has two TetR DNA-binding domains; putative regulatory protein	3991479..3992822	Mycobacterium ulcerans Agy99	4553298
YP_907210.1	CDS	thiD	NC_008611.1	3993365	3994192	R	catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase	complement(3993365..3994192)	Mycobacterium ulcerans Agy99	4553300
YP_907211.1	CDS	thiC	NC_008611.1	3994189	3995829	R	required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC	complement(3994189..3995829)	Mycobacterium ulcerans Agy99	4553301
YP_907212.1	CDS	MUL_3601	NC_008611.1	3995829	3996749	D	cytoplasmic protein; function unknown but may be involved in signal transduction pathway as it contains a PAS-like central senor domain and an Antar domain.; putative regulatory protein	3995829..3996749	Mycobacterium ulcerans Agy99	4553302
YP_907213.1	CDS	MUL_3602	NC_008611.1	3996880	3997275	D	cytoplasmic protein; function unknown but domain identity shared with the anti-sigma factor antagonist superfamily SpoIIAA; anti sigma factor antagonist	3996880..3997275	Mycobacterium ulcerans Agy99	4553303
YP_907214.1	CDS	MUL_3604	NC_008611.1	4001165	4001443	R	cytoplasmic protein; hypothetical protein	complement(4001165..4001443)	Mycobacterium ulcerans Agy99	4553305
YP_907215.1	CDS	MUL_3606	NC_008611.1	4004641	4005975	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	4004641..4005975	Mycobacterium ulcerans Agy99	4553307
YP_907216.1	CDS	MUL_3609	NC_008611.1	4009684	4011018	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	4009684..4011018	Mycobacterium ulcerans Agy99	4553310
YP_907217.1	CDS	glyS	NC_008611.1	4011196	4012575	R	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase	complement(4011196..4012575)	Mycobacterium ulcerans Agy99	4553311
YP_907218.1	CDS	MUL_3611	NC_008611.1	4012780	4013175	D	cytoplasmic protein; involved in transcriptional mechanism.; ArsR family transcriptional regulator	4012780..4013175	Mycobacterium ulcerans Agy99	4553312
YP_907219.1	CDS	furB	NC_008611.1	4013172	4013585	D	cytoplasmic protein; acts as a global negative controlling element, employing fe(2+) as a cofactor to bind the operator of the repressed genes. regulates the expression of several outer- membrane proteins including the iron transport operon (by similarity); ferric uptake regulation protein FurB	4013172..4013585	Mycobacterium ulcerans Agy99	4553277
YP_907220.1	CDS	MUL_3613	NC_008611.1	4013582	4014022	R	cytoplasmic protein; hypothetical protein	complement(4013582..4014022)	Mycobacterium ulcerans Agy99	4553278
YP_907221.1	CDS	MUL_3614	NC_008611.1	4014022	4014912	R	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase	complement(4014022..4014912)	Mycobacterium ulcerans Agy99	4553279
YP_907222.1	CDS	recO	NC_008611.1	4014905	4015702	R	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO	complement(4014905..4015702)	Mycobacterium ulcerans Agy99	4553280
YP_907223.1	CDS	amiA2	NC_008611.1	4015764	4017263	D	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase	4015764..4017263	Mycobacterium ulcerans Agy99	4553281
YP_907224.1	CDS	era	NC_008611.1	4017260	4018162	R	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era	complement(4017260..4018162)	Mycobacterium ulcerans Agy99	4553282
YP_907225.1	CDS	MUL_3618	NC_008611.1	4018152	4018382	R	cytoplasmic protein; hypothetical protein	complement(4018152..4018382)	Mycobacterium ulcerans Agy99	4553283
YP_907226.1	CDS	MUL_3620	NC_008611.1	4019671	4020207	R	cytoplasmic protein; putative metalloprotease	complement(4019671..4020207)	Mycobacterium ulcerans Agy99	4553285
YP_907227.1	CDS	phoH1	NC_008611.1	4020226	4021284	R	cytoplasmic protein; PhoH-like protein PhoH1	complement(4020226..4021284)	Mycobacterium ulcerans Agy99	4553286
YP_907228.1	CDS	MUL_3622	NC_008611.1	4021352	4022074	R	cytoplasmic protein; function unknown but contains tetracycline repressor-like C-terminal superfamily domain.; putative regulatory protein	complement(4021352..4022074)	Mycobacterium ulcerans Agy99	4553287
YP_907229.1	CDS	MUL_3624	NC_008611.1	4023113	4023622	D	cytoplasmic protein; hypothetical protein	4023113..4023622	Mycobacterium ulcerans Agy99	4553289
YP_907230.1	CDS	MUL_3625	NC_008611.1	4023645	4024406	R	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE	complement(4023645..4024406)	Mycobacterium ulcerans Agy99	4553290
YP_907231.1	CDS	dnaJ2	NC_008611.1	4024435	4025571	R	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ	complement(4024435..4025571)	Mycobacterium ulcerans Agy99	4553291
YP_907232.1	CDS	hrcA	NC_008611.1	4025646	4026677	R	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor	complement(4025646..4026677)	Mycobacterium ulcerans Agy99	4553292
YP_907233.1	CDS	MUL_3628	NC_008611.1	4026965	4027264	D	cytoplasmic protein; hypothetical protein	4026965..4027264	Mycobacterium ulcerans Agy99	4553293
YP_907234.1	CDS	MUL_3629	NC_008611.1	4027371	4027958	D	cytoplasmic protein; function unknown but contains identity with antioxidant defence protein Ahp; hypothetical protein	4027371..4027958	Mycobacterium ulcerans Agy99	4553294
YP_907235.1	CDS	MUL_3630	NC_008611.1	4027955	4028854	D	cytoplasmic protein; the sigma factor is an initiation factor that promotes attachment of the RNA polymerase to specific initiation sites and then is released. belongs to the sigma-70 factor family, ECF subfamily.; alternative RNA polymerase sigma factor SigJ- like	4027955..4028854	Mycobacterium ulcerans Agy99	4553295
YP_907236.1	CDS	mbtB	NC_008611.1	4029686	4033177	R	cytoplasmic protein; involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins. this peptide synthase forms amide bound between the carboxylic acid of salicylate and the alpha-amino group of serine (serine/threonine ligation); phenyloxazoline synthase MbtB	complement(4029686..4033177)	Mycobacterium ulcerans Agy99	4553153
YP_907237.1	CDS	mbtF	NC_008611.1	4033213	4037751	R	cytoplasmic protein; involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins. activates amino acid residues that are incorporated into mycobactin (ligation); non-ribosomal peptide synthetase MbtF	complement(4033213..4037751)	Mycobacterium ulcerans Agy99	4553154
YP_907238.1	CDS	mbtE	NC_008611.1	4037748	4042760	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins. probably activates the two lysine residues that are incorporated into mycobactin (lysine ligation); non-ribosomal peptide synthetase MbtE	complement(4037748..4042760)	Mycobacterium ulcerans Agy99	4553155
YP_907239.1	CDS	MUL_3635	NC_008611.1	4043035	4043640	D	cytoplasmic protein; function unknown but contains acyl-CoA N- acetyltransferase superfamily domain; hypothetical protein	4043035..4043640	Mycobacterium ulcerans Agy99	4553156
YP_907240.1	CDS	MUL_3636	NC_008611.1	4043750	4044508	D	cytoplasmic protein; may be required for the addition of the terminal aa in this Nrp operon; thioesterase	4043750..4044508	Mycobacterium ulcerans Agy99	4553157
YP_907241.1	CDS	mbtC	NC_008611.1	4044505	4045824	D	cytoplasmic protein; involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins.; polyketide synthase MbtC	4044505..4045824	Mycobacterium ulcerans Agy99	4553158
YP_907242.1	CDS	mbtD	NC_008611.1	4045821	4048895	D	cytoplasmic protein; involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins.; polyketide synthase MbtD	4045821..4048895	Mycobacterium ulcerans Agy99	4553159
YP_907243.1	CDS	mbtH_1	NC_008611.1	4048900	4049115	R	cytoplasmic protein; thought to be involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins.; hypothetical protein	complement(4048900..4049115)	Mycobacterium ulcerans Agy99	4553160
YP_907244.1	CDS	mbtG	NC_008611.1	4049096	4050400	R	cytoplasmic protein; involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins. this hydroxylase is possibly required for N-hydroxylation of the two lysine residues at some stage during mycobactin assembly [catalytic activity: L-lysine + O(2) = N6-hydroxy- L-lysine + H(2)O. no information can be found if this enzyme is NADPH dependent or independent]; lysine-N-oxygenase MbtG	complement(4049096..4050400)	Mycobacterium ulcerans Agy99	4553161
YP_907245.1	CDS	mbtA	NC_008611.1	4050636	4052249	D	membrane protein; involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins (initiation step of mycobactin chain growth) activates the mycobactin ACP in two half-reactions: activates salicylic acid as acyladenylate (adenylation step) + transfers activated salicylate to the MbtA ACP as a thioester (arylation step); bifunctional enzyme MbtA: salicyl-AMP ligase (SAL-AMP ligase) + salicyl-S-ACP synthetase	4050636..4052249	Mycobacterium ulcerans Agy99	4553162
YP_907246.1	CDS	mbtJ	NC_008611.1	4052359	4053354	D	cytoplasmic protein; involved in the biogenesis of the hydroxyphenyloxazoline-containing siderophore mycobactins. possibly required for N-hydroxylation of the two lysine residues at some stage during mycobactin assembly.; acetyl hydrolase MbtJ	4052359..4053354	Mycobacterium ulcerans Agy99	4553163
YP_907247.1	CDS	MUL_3643	NC_008611.1	4053356	4054216	D	membrane protein; short-chain membrane-associated dehydrogenase	4053356..4054216	Mycobacterium ulcerans Agy99	4553164
YP_907248.1	CDS	MUL_3645	NC_008611.1	4055176	4055880	D	cytoplasmic protein; function unknown. possibly involved in transcriptional mechanism.; putative transcriptional regulator	4055176..4055880	Mycobacterium ulcerans Agy99	4553166
YP_907249.1	CDS	desA1_1	NC_008611.1	4055912	4056928	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; catalyzes the principal conversion of saturated fatty acids to unsaturated fatty acids. thought to convert stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons delta-9 and delta-10 of the acyl chain [catalytic activity: stearoyl-[acyl-carrier protein] + AH2 + O2 = oleoyl-[acyl-carrier protein] + a + 2 H2O]; acyl-[acyl-carrier protein] desaturase DesA1	complement(4055912..4056928)	Mycobacterium ulcerans Agy99	4553167
YP_907250.1	CDS	MUL_3647	NC_008611.1	4057055	4057801	R	cytoplasmic protein; hypothetical protein	complement(4057055..4057801)	Mycobacterium ulcerans Agy99	4553168
YP_907251.1	CDS	mbtI	NC_008611.1	4058002	4059363	R	catalyzes conversion of chorismate to salicylate, in mycobactin siderophore construction; requires Mg(2+) for function; salicylate synthase MbtI	complement(4058002..4059363)	Mycobacterium ulcerans Agy99	4553169
YP_907252.1	CDS	MUL_3649	NC_008611.1	4059752	4059961	D	cytoplasmic protein; hypothetical protein	4059752..4059961	Mycobacterium ulcerans Agy99	4553170
YP_907253.1	CDS	MUL_3650	NC_008611.1	4060251	4061486	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; membrane permease	4060251..4061486	Mycobacterium ulcerans Agy99	4553171
YP_907254.1	CDS	hemN	NC_008611.1	4061498	4062670	R	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase	complement(4061498..4062670)	Mycobacterium ulcerans Agy99	4553114
YP_907255.1	CDS	nirA_2	NC_008611.1	4063107	4064774	D	cytoplasmic protein; generates nitrite from ammonia using oxidized ferredoxin [catalytic activity: ammonia + H(2)O + oh(-) + 3 oxidized ferredoxin = nitrite + 3 reduced ferredoxin] can also act as a sulphite reductase. the sulfite reductases catalyze the reduction of sulfite to sulfide, one step in the biosynthesis of sulfur-containing amino acids and cofactors. this appears to be the only intact nitrite reductase in M. ulcerans.; ferredoxin-dependent nitrite/sulfite reductase NirA	4063107..4064774	Mycobacterium ulcerans Agy99	4553115
YP_907256.1	CDS	cysH	NC_008611.1	4064771	4065520	D	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase	4064771..4065520	Mycobacterium ulcerans Agy99	4553116
YP_907257.1	CDS	MUL_3654	NC_008611.1	4065517	4066191	D	membrane protein; function unknown but contains a chelatase superfamily domain. given the presence of other heme- associated CDS in this region and the presence of a chelatase superfamily domain, this CDS may encode a ferrochelatase, catalyzing the last step in HemE biosynthesis.; hypothetical protein	4065517..4066191	Mycobacterium ulcerans Agy99	4553117
YP_907258.1	CDS	cysA1	NC_008611.1	4070337	4071428	R	membrane protein; involved in the active transport across the membrane of multiple sulfur-containing compounds, including sulfate and thiosulfate (import) responsible for energy coupling to the transport system.; sulfate-transport ABC transporter ATP-binding protein CysA1	complement(4070337..4071428)	Mycobacterium ulcerans Agy99	4553120
YP_907259.1	CDS	cysW	NC_008611.1	4071443	4072261	R	membrane protein; involved in the active transport across the membrane of multiple sulfur-containing compounds, including sulfate and thiosulfate (import) responsible for the translocation of the substrate across the membrane.; sulfate-transport integral membrane protein ABC transporter CysW	complement(4071443..4072261)	Mycobacterium ulcerans Agy99	4553121
YP_907260.1	CDS	cysT	NC_008611.1	4072258	4073160	R	membrane protein; involved in the active transport across the membrane of multiple sulfur-containing compounds, including sulfate and thiosulfate (import) responsible for the translocation of the substrate across the membrane.; sulfate-transport integral membrane protein ABC transporter CysT	complement(4072258..4073160)	Mycobacterium ulcerans Agy99	4553122
YP_907261.1	CDS	subI	NC_008611.1	4073157	4074206	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in the active transport across the membrane of multiple sulfur-containing compounds, including sulfate and thiosulfate (import); sulfate-binding lipoprotein SubI	complement(4073157..4074206)	Mycobacterium ulcerans Agy99	4553123
YP_907262.1	CDS	MUL_3662	NC_008611.1	4074556	4074750	R	cytoplasmic protein; hypothetical protein	complement(4074556..4074750)	Mycobacterium ulcerans Agy99	4553124
YP_907263.1	CDS	MUL_3663	NC_008611.1	4074826	4076064	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; hypothetical protein	4074826..4076064	Mycobacterium ulcerans Agy99	4553125
YP_907264.1	CDS	MUL_3664	NC_008611.1	4076135	4078201	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; glycosyl hydrolase	4076135..4078201	Mycobacterium ulcerans Agy99	4553126
YP_907265.1	CDS	lppR	NC_008611.1	4078219	4078980	R	secreted protein; lipoprotein LppR	complement(4078219..4078980)	Mycobacterium ulcerans Agy99	4553127
YP_907266.1	CDS	lppR_1	NC_008611.1	4078992	4079735	R	secreted protein; lipoprotein LppR	complement(4078992..4079735)	Mycobacterium ulcerans Agy99	4553128
YP_907267.1	CDS	lepA	NC_008611.1	4079738	4081477	R	binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA	complement(4079738..4081477)	Mycobacterium ulcerans Agy99	4553129
YP_907268.1	CDS	MUL_3668	NC_008611.1	4081745	4082290	D	cytoplasmic protein; function unknown but domain identity with plasmid maintenance toxin superfamily; hypothetical protein	4081745..4082290	Mycobacterium ulcerans Agy99	4553130
YP_907269.1	CDS	MUL_3669	NC_008611.1	4082332	4082760	R	cytoplasmic protein; function unknown but contains 2 Cbs domains; transcriptional regulator	complement(4082332..4082760)	Mycobacterium ulcerans Agy99	4553131
YP_907270.1	CDS	MUL_3670	NC_008611.1	4082986	4083825	D	member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z	4082986..4083825	Mycobacterium ulcerans Agy99	4553132
YP_907271.1	CDS	MUL_3671	NC_008611.1	4083988	4085268	D	PE_PGRS2; membrane protein; PE-PGRS family protein	4083988..4085268	Mycobacterium ulcerans Agy99	4553133
YP_907272.1	CDS	MUL_3672	NC_008611.1	4085372	4086748	D	PE_PGRS25; membrane protein; PE-PGRS family protein	4085372..4086748	Mycobacterium ulcerans Agy99	4553079
YP_907273.1	CDS	MUL_3673	NC_008611.1	4086753	4087592	R	cytoplasmic protein; function unknown but based on domain identity it may cross-link proteins through an acyl-transfer reaction between the gamma-carboxamide group of peptide-bound glutamine and the epsilon-amino group of peptide-bound lysine.; putative transglutaminase-like protein	complement(4086753..4087592)	Mycobacterium ulcerans Agy99	4553080
YP_907274.1	CDS	MUL_3674	NC_008611.1	4087592	4088569	R	cytoplasmic protein; hypothetical protein	complement(4087592..4088569)	Mycobacterium ulcerans Agy99	4553081
YP_907275.1	CDS	MUL_3675	NC_008611.1	4088569	4090242	R	cytoplasmic protein; function unknown but contains two glutathione synthetase ATP-binding superfamily domain-like sequences; hypothetical protein	complement(4088569..4090242)	Mycobacterium ulcerans Agy99	4553082
YP_907276.1	CDS	rpsT	NC_008611.1	4090381	4090644	D	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20	4090381..4090644	Mycobacterium ulcerans Agy99	4553083
YP_907277.1	CDS	holA	NC_008611.1	4090716	4091693	R	cytoplasmic protein; possible role in DNA replication. two superfamily domains detected. N-term contains P-loop nucleoside triphosphate hydrolase. C-term contains DNA polymerase III, delta subunit.; hypothetical protein	complement(4090716..4091693)	Mycobacterium ulcerans Agy99	4553084
YP_907278.1	CDS	MUL_3678	NC_008611.1	4091787	4092833	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4091787..4092833)	Mycobacterium ulcerans Agy99	4553085
YP_907279.1	CDS	comEC	NC_008611.1	4093109	4094662	R	membrane protein; function unknown, predicted membrane metal-binding protein; membrane metal-binding protein ComEC	complement(4093109..4094662)	Mycobacterium ulcerans Agy99	4553086
YP_907280.1	CDS	comEA	NC_008611.1	4094680	4095555	R	membrane protein; function unknown but domain identity suggests ComEA. a family of DNA uptake protein and related DNA- binding proteins involved in DNA replication, recombination, and repair.; membrane protein ComEA	complement(4094680..4095555)	Mycobacterium ulcerans Agy99	4553087
YP_907281.1	CDS	fadE17_1	NC_008611.1	4095810	4096976	D	Detected in the membrane fraction by proteomics, and in the  cytoplamic and extracellular matrix fractions by LCMSMS; cytoplasmic protein; function unknown, but probable involvement in lipid metabolism.; acyl-CoA dehydrogenase FadE17	4095810..4096976	Mycobacterium ulcerans Agy99	4553088
YP_907282.1	CDS	fadE18_2	NC_008611.1	4096984	4098102	D	cytoplasmic protein; function unknown, but supposed involvement in lipid metabolism.; acyl-CoA dehydrogenase FadE18	4096984..4098102	Mycobacterium ulcerans Agy99	4553089
YP_907283.1	CDS	MUL_3683	NC_008611.1	4098358	4099458	D	membrane protein; function unknown but contains FAD/NAD(P)-binding superfamily domain; hypothetical protein	4098358..4099458	Mycobacterium ulcerans Agy99	4553090
YP_907284.1	CDS	MUL_3685	NC_008611.1	4101005	4102054	D	cytoplasmic protein; function unknown but contains superfamily NAD(P)- binding Rossmann-fold domains; hypothetical protein	4101005..4102054	Mycobacterium ulcerans Agy99	4553092
YP_907285.1	CDS	MUL_3686	NC_008611.1	4102057	4102833	D	membrane protein; hypothetical protein	4102057..4102833	Mycobacterium ulcerans Agy99	4553093
YP_907286.1	CDS	mmpS5_1	NC_008611.1	4103173	4103592	D	membrane protein; membrane protein MmpS5	4103173..4103592	Mycobacterium ulcerans Agy99	4553094
YP_907287.1	CDS	mmpL4_1	NC_008611.1	4103589	4106510	D	membrane protein; function unknown. thought to be involved in lipid transport.; transmembrane transport protein MmpL	4103589..4106510	Mycobacterium ulcerans Agy99	4553050
YP_907288.1	CDS	MUL_3689	NC_008611.1	4106546	4107391	R	cytoplasmic protein; function unknown, contains DegV-like superfamily domain; hypothetical protein	complement(4106546..4107391)	Mycobacterium ulcerans Agy99	4553051
YP_907289.1	CDS	MUL_3690	NC_008611.1	4107395	4108150	R	cytoplasmic protein; function unknown but contains esterase/acetylhydrolase superfamily domain; hypothetical protein	complement(4107395..4108150)	Mycobacterium ulcerans Agy99	4553052
YP_907290.1	CDS	gpm_1	NC_008611.1	4108140	4108814	R	cytoplasmic protein; involved in glycolysis [catalytic activity: 2- phosphoglycerate + 2,3-diphosphoglycerate = 3- phosphoglycerate + 2,3-diphosphoglycerate]; phosphoglycerate mutase	complement(4108140..4108814)	Mycobacterium ulcerans Agy99	4553053
YP_907291.1	CDS	nadD	NC_008611.1	4108811	4109845	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in NAD biosynthesis; catalyzes the reversible adenylation of nicotinate mononucleotide [catalytic activity: ATP + nicotinate ribonucleotide = diphosphate + deamido-NAD(+)] this CDS is a combination of NadD translationally fused at the C-term with an orthologue of Rv2420c. this coupling is not seen in M. marinum nor in other mycobacteria although in other species Rv2420c is immediately d/s of NadD. probably caused by mutational loss of a stop codon.; bifunctional nicotinate-nucleotide adenylyltransferase NadD/hypothetical protein	complement(4108811..4109845)	Mycobacterium ulcerans Agy99	4553054
YP_907292.1	CDS	MUL_3694	NC_008611.1	4111129	4112568	R	cytoplasmic protein; function unknown but contains a von willebrand factor type a conserved domain; hypothetical protein	complement(4111129..4112568)	Mycobacterium ulcerans Agy99	4553056
YP_907293.1	CDS	MUL_3695	NC_008611.1	4112582	4113457	R	Also detected in the membrane fraction by proteomics; cytoplasmic protein; function unknown but contains aaa ATPase domain containing von willebrand factor type a (vWA) domain; hypothetical protein	complement(4112582..4113457)	Mycobacterium ulcerans Agy99	4553057
YP_907294.1	CDS	proA	NC_008611.1	4113491	4114762	R	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase	complement(4113491..4114762)	Mycobacterium ulcerans Agy99	4553058
YP_907295.1	CDS	MUL_3697	NC_008611.1	4114855	4116249	R	membrane protein; hypothetical protein	complement(4114855..4116249)	Mycobacterium ulcerans Agy99	4553059
YP_907296.1	CDS	MUL_3698	NC_008611.1	4116246	4118357	R	membrane protein; generates 3,'5'-cyclic (A/G)mp and diphosphate (or pyrophosphate) from (A/G)tp.; adenylate or guanylate cyclase	complement(4116246..4118357)	Mycobacterium ulcerans Agy99	4553060
YP_907297.1	CDS	MUL_3699	NC_008611.1	4118604	4120004	R	cytoplasmic protein; function unknown but domain identity suggests that it may be a mechanosensitive (ms) ion channel protein with a C-term putative cyclic nucleotide (camp or cGMP) binding domain.; hypothetical protein	complement(4118604..4120004)	Mycobacterium ulcerans Agy99	4553061
YP_907298.1	CDS	MUL_3702	NC_008611.1	4122738	4124072	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	4122738..4124072	Mycobacterium ulcerans Agy99	4553063
YP_907299.1	CDS	MUL_3703	NC_008611.1	4124507	4125553	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	4124507..4125553	Mycobacterium ulcerans Agy99	4553064
YP_907300.1	CDS	MUL_3704	NC_008611.1	4125622	4126998	D	PE_PGRS33_1; membrane protein; function unknown. seems to influence both cell surface interactions among mycobacteria and the interactions of bacteria with macrophages; PE-PGRS family protein	4125622..4126998	Mycobacterium ulcerans Agy99	4553065
YP_907301.1	CDS	nadE	NC_008611.1	4127111	4129153	R	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase	complement(4127111..4129153)	Mycobacterium ulcerans Agy99	4553066
YP_907302.1	CDS	MUL_3706	NC_008611.1	4129463	4130314	D	cytoplasmic protein; function unknown, involved in transcriptional mechanism; Sir2-like regulatory protein	4129463..4130314	Mycobacterium ulcerans Agy99	4553000
YP_907303.1	CDS	MUL_3708	NC_008611.1	4131788	4132426	D	cytoplasmic protein; function unknown. possibly involved in transcriptional mechanism.; AcrR family transcriptional regulator	4131788..4132426	Mycobacterium ulcerans Agy99	4553002
YP_907304.1	CDS	proB	NC_008611.1	4137065	4138171	R	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase	complement(4137065..4138171)	Mycobacterium ulcerans Agy99	4553004
YP_907305.1	CDS	obgE	NC_008611.1	4138171	4139610	R	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE	complement(4138171..4139610)	Mycobacterium ulcerans Agy99	4553005
YP_907306.1	CDS	rpmA	NC_008611.1	4139715	4139981	R	involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27	complement(4139715..4139981)	Mycobacterium ulcerans Agy99	4553006
YP_907307.1	CDS	rplU	NC_008611.1	4139999	4140310	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in translation mechanisms.; 50S ribosomal protein L21	complement(4139999..4140310)	Mycobacterium ulcerans Agy99	4553007
YP_907308.1	CDS	rne	NC_008611.1	4140583	4143549	R	cytoplasmic protein; thought to be involved in several cellular process.; ribonuclease E Rne	complement(4140583..4143549)	Mycobacterium ulcerans Agy99	4553008
YP_907309.1	CDS	ndk	NC_008611.1	4143876	4144286	R	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase	complement(4143876..4144286)	Mycobacterium ulcerans Agy99	4553009
YP_907310.1	CDS	MUL_3717	NC_008611.1	4144350	4144754	R	membrane protein; hypothetical protein	complement(4144350..4144754)	Mycobacterium ulcerans Agy99	4553010
YP_907311.1	CDS	folC	NC_008611.1	4144751	4146205	R	cytoplasmic protein; conversion of folates to polyglutamate derivatives. bacteria require folate for the biosynthesis of glycine, methionine, formyl-met-tRNA, thymidylates, purines, and pantothenate [catalytic activity: ATP + {tetrahydrofolyl- [Glu]}(N) + L-glutamate = ADP + phosphate + {tetrahydrofolyl-[Glu]}(n+1)]; folylpolyglutamate synthase protein FolC	complement(4144751..4146205)	Mycobacterium ulcerans Agy99	4553011
YP_907312.1	CDS	valS	NC_008611.1	4146202	4148862	R	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase	complement(4146202..4148862)	Mycobacterium ulcerans Agy99	4553012
YP_907313.1	CDS	MUL_3720	NC_008611.1	4148937	4149560	R	Detected in the cytoplasm and in the extracellular matrix by proteomics.; cytoplasmic protein; function unknown but N-term contains a bulb-type mannose-specific lectin and C-term contains a LysM, a putative peptidoglycan-binding domain.; hypothetical protein	complement(4148937..4149560)	Mycobacterium ulcerans Agy99	4553013
YP_907314.1	CDS	MUL_3721	NC_008611.1	4149644	4150249	R	membrane protein; hypothetical protein	complement(4149644..4150249)	Mycobacterium ulcerans Agy99	4553014
YP_907315.1	CDS	MUL_3722	NC_008611.1	4150348	4151604	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS) Also Detected in the extracellular matrix and the cytoplasmic fractions by proteomics.; membrane protein; function unknown but contains potential saccharopine-like dehydrogenase domain; hypothetical protein	complement(4150348..4151604)	Mycobacterium ulcerans Agy99	4553015
YP_907316.1	CDS	rpfE	NC_008611.1	4151771	4152415	R	secreted protein; thought to promote the resuscitation and growth of dormant, nongrowing cells. could also stimulate the growth of several other high G+C Gram+ organisms, E.G. mycobacterium avium, mycobacterium bovis (BCG), mycobacterium kansasii, mycobacterium smegmatis.; resuscitation-promoting factor RpfE	complement(4151771..4152415)	Mycobacterium ulcerans Agy99	4552932
YP_907317.1	CDS	mobA	NC_008611.1	4152947	4153552	R	MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein A	complement(4152947..4153552)	Mycobacterium ulcerans Agy99	4552933
YP_907318.1	CDS	porB	NC_008611.1	4153555	4154646	R	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta	complement(4153555..4154646)	Mycobacterium ulcerans Agy99	4552934
YP_907319.1	CDS	porA	NC_008611.1	4154695	4156656	R	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; function unknown, probably involved in cellular metabolism.; pyruvate:ferredoxin oxidoreductase, PorA, alpha subunit	complement(4154695..4156656)	Mycobacterium ulcerans Agy99	4552935
YP_907320.1	CDS	MUL_3727	NC_008611.1	4157002	4158300	R	membrane protein; thought to be involved in transport of undeterminated substrate (possibly sugar) across the membrane. responsible for the translocation of the substrate across the membrane.; integral membrane transport protein	complement(4157002..4158300)	Mycobacterium ulcerans Agy99	4552936
YP_907321.1	CDS	clpX	NC_008611.1	4158310	4159590	R	binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX	complement(4158310..4159590)	Mycobacterium ulcerans Agy99	4552937
YP_907322.1	CDS	MUL_3729	NC_008611.1	4160226	4161890	D	membrane protein; thought to be involved in a transport system across the membrane (perhaps drug transport): responsible for the translocation of the substrate across the membrane.; integral membrane transport protein	4160226..4161890	Mycobacterium ulcerans Agy99	4552938
YP_907323.1	CDS	clpP2	NC_008611.1	4161947	4162582	R	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit	complement(4161947..4162582)	Mycobacterium ulcerans Agy99	4552939
YP_907324.1	CDS	clpP	NC_008611.1	4162579	4163175	R	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit	complement(4162579..4163175)	Mycobacterium ulcerans Agy99	4552940
YP_907325.1	CDS	tig	NC_008611.1	4163298	4164752	R	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor	complement(4163298..4164752)	Mycobacterium ulcerans Agy99	4552941
YP_907326.1	CDS	lipP	NC_008611.1	4165218	4166318	D	cytoplasmic protein; function unknown, lipolytic enzyme involved in cellular metabolism.; esterase/lipase LipP	4165218..4166318	Mycobacterium ulcerans Agy99	4552944
YP_907327.1	CDS	MUL_3736	NC_008611.1	4166402	4166698	R	secreted protein; hypothetical protein	complement(4166402..4166698)	Mycobacterium ulcerans Agy99	4552945
YP_907328.1	CDS	MUL_3737	NC_008611.1	4166820	4167626	R	cytoplasmic protein; hydrolyses DNA (this enzyme may play a significant role in processes leading to recovery from mutagenesis and/or cell death by alkylating agents); formamidopyrimidine-DNA glycosylase	complement(4166820..4167626)	Mycobacterium ulcerans Agy99	4552946
YP_907329.1	CDS	rpiB	NC_008611.1	4167635	4168114	R	catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B	complement(4167635..4168114)	Mycobacterium ulcerans Agy99	4549706
YP_907330.1	CDS	MUL_3741	NC_008611.1	4170425	4171621	R	PE_PGRS59; membrane protein; N-term PE-PGRS family protein	complement(4170425..4171621)	Mycobacterium ulcerans Agy99	4549709
YP_907331.1	CDS	pepN	NC_008611.1	4171897	4174476	D	Also detected in the extracellular matrix by proteomics. Also detected in the membrane fraction by proteomics.; cytoplasmic protein; aminopeptidase with broad substrate specificity to several peptides (could preferentially cleave leucine, arginine and lysine in peptide-bond-containing substrates); aminopeptidase N PepN	4171897..4174476	Mycobacterium ulcerans Agy99	4549710
YP_907332.1	CDS	MUL_3743	NC_008611.1	4174569	4175036	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; hypothetical protein	complement(4174569..4175036)	Mycobacterium ulcerans Agy99	4549711
YP_907333.1	CDS	MUL_3744	NC_008611.1	4175023	4175256	R	cytoplasmic protein; hypothetical protein	complement(4175023..4175256)	Mycobacterium ulcerans Agy99	4549712
YP_907334.1	CDS	MUL_3745	NC_008611.1	4175358	4175999	R	cytoplasmic protein; function unknown but contains McrA, restriction endonuclease domain; hypothetical protein	complement(4175358..4175999)	Mycobacterium ulcerans Agy99	4549713
YP_907335.1	CDS	glbO	NC_008611.1	4176153	4176539	D	cytoplasmic protein; oxygen carrier, involved in oxygen transport.; globin (oxygen-binding protein) GlbO	4176153..4176539	Mycobacterium ulcerans Agy99	4549714
YP_907336.1	CDS	choD_1	NC_008611.1	4179915	4181654	R	cytoplasmic protein; involved in cholesterol metabolism [catalytic activity: cholesterol + O(2) = cholest-4-en-3-one + H(2)O(2)]; cholesterol oxidase ChoD	complement(4179915..4181654)	Mycobacterium ulcerans Agy99	4549717
YP_907337.1	CDS	MUL_3752	NC_008611.1	4186262	4186966	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	4186262..4186966	Mycobacterium ulcerans Agy99	4549720
YP_907338.1	CDS	MUL_3753	NC_008611.1	4186991	4187308	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	4186991..4187308	Mycobacterium ulcerans Agy99	4549721
YP_907339.1	CDS	MUL_3754	NC_008611.1	4187371	4188033	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(4187371..4188033)	Mycobacterium ulcerans Agy99	4549722
YP_907340.1	CDS	MUL_3755	NC_008611.1	4188030	4188446	R	cytoplasmic protein; function unknown but some identity with thioesterase domains; hypothetical protein	complement(4188030..4188446)	Mycobacterium ulcerans Agy99	4549723
YP_907341.1	CDS	MUL_3757	NC_008611.1	4193462	4195138	R	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein	complement(4193462..4195138)	Mycobacterium ulcerans Agy99	4549725
YP_907342.1	CDS	MUL_3758	NC_008611.1	4195206	4195703	R	cytoplasmic protein; function unknown but may play a role in DNA replication, recombination, and repair; hypothetical protein	complement(4195206..4195703)	Mycobacterium ulcerans Agy99	4549726
YP_907343.1	CDS	plsC	NC_008611.1	4201067	4202992	R	membrane protein; N-terminus: could be generate serine and phosphate from phosphoserine; may catalyze the last step in the biosynthesis of serine from carbohydrates (the reaction mechanism could be proceed via the formation of a phosphoryl-enzyme intermediates) [catalytic activity 1: phosphoserine + H(2)O = serine + phosphate]  mid-section: involved in phospholipid biosynthesis (at the second step); converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [catalytic activity 2: acyl-CoA + 1-acyl-SN- glycerol 3-phosphate = CoA + 1,2-diacyl-SN-glycerol 3- phosphate]   c-terminus: contains tola protein domain homology. may serve to anchor this protein in the cm.; bifunctional transmembrane phospholipid biosynthesis enzyme PlsC	complement(4201067..4202992)	Mycobacterium ulcerans Agy99	4549730
YP_907344.1	CDS	MUL_3765	NC_008611.1	4202989	4204491	R	membrane protein; function unknown but N-term contains a CoA- dependanant acyltransferase domain.; hypothetical protein	complement(4202989..4204491)	Mycobacterium ulcerans Agy99	4549731
YP_907345.1	CDS	lipQ	NC_008611.1	4204703	4205956	R	cytoplasmic protein; function unknown, lipolytic enzyme involved in cellular metabolism.; carboxylesterase LipQ	complement(4204703..4205956)	Mycobacterium ulcerans Agy99	4549732
YP_907346.1	CDS	MUL_3769	NC_008611.1	4207301	4207612	R	cytoplasmic protein; hypothetical protein	complement(4207301..4207612)	Mycobacterium ulcerans Agy99	4549735
YP_907347.1	CDS	cobQ1	NC_008611.1	4207815	4209290	R	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase	complement(4207815..4209290)	Mycobacterium ulcerans Agy99	4549736
YP_907348.1	CDS	MUL_3771	NC_008611.1	4210009	4210419	D	secreted protein; hypothetical protein	4210009..4210419	Mycobacterium ulcerans Agy99	4549737
YP_907349.1	CDS	mmaA5	NC_008611.1	4210438	4211307	R	Detected in the membrane fraction by proteomics.; membrane protein; involved in mycolic acids modification. catalyzes unusual S-adenosyl-methionine-dependent transformation of a cis-olefin mycolic acid into a secondary alcohol. catalyzes introduction of a hydroxyl group at the distal position on mycolic acid chains to produce the hydroxyl mycolate. mycolic acids represent a major constituent of the mycobacterial cell wall complex. methyl transfer results in formation of a secondary hydroxy group with an adjacent methyl branch; olefinic mycolic acid methyl transferase.; methoxy mycolic acid synthase 5 MmaA5	complement(4210438..4211307)	Mycobacterium ulcerans Agy99	4549738
YP_907350.1	CDS	pdhC	NC_008611.1	4211626	4212795	R	cytoplasmic protein; involved in energy metabolism. the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA & CO(2) it contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) & lipoamide dehydrogenase (E3) [catalytic activity: acetyl-CoA + dihydrolipoamide = CoA + S- acetyldihydrolipoamide]; branched-chain alpha-keto acid dehydrogenase subunit E2	complement(4211626..4212795)	Mycobacterium ulcerans Agy99	4549739
YP_907351.1	CDS	pdhB	NC_008611.1	4212792	4213838	R	cytoplasmic protein; involved in energy metabolism. the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA & CO(2) it contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) & lipoamide dehydrogenase (E3) [catalytic activity: acetyl-CoA + dihydrolipoamide = CoA + S- acetyldihydrolipoamide]; pyruvate dehydrogenase E1 component subunit PdhB	complement(4212792..4213838)	Mycobacterium ulcerans Agy99	4549740
YP_907352.1	CDS	pdhA	NC_008611.1	4213849	4214916	R	cytoplasmic protein; involved in energy metabolism. the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA & CO(2) it contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) & lipoamide dehydrogenase (E3) [catalytic activity: acetyl-CoA + dihydrolipoamide = CoA + S- acetyldihydrolipoamide]; pyruvate dehydrogenase E1 component subunit PdhA	complement(4213849..4214916)	Mycobacterium ulcerans Agy99	4553465
YP_907353.1	CDS	citE	NC_008611.1	4215281	4216102	R	cytoplasmic protein; interconversion of acetate and oxaloacetate from citrate [catalytic activity: citrate = acetate + oxaloacetate]; citrate (pro-3S)-lyase subunit beta	complement(4215281..4216102)	Mycobacterium ulcerans Agy99	4553466
YP_907354.1	CDS	MUL_3777	NC_008611.1	4216099	4216605	R	Detected in the cytoplamic fraction by LCMSMS; cytoplasmic protein; function unknown but contains a central MaoC, acyl dehydratase domain; hypothetical protein	complement(4216099..4216605)	Mycobacterium ulcerans Agy99	4553467
YP_907355.1	CDS	fadE19	NC_008611.1	4216602	4217768	R	cytoplasmic protein; function unknown, but seems involved in metabolism of small branched-chain fatty acids and macrolide antibiotic production. catalyses the alpha, beta- dehydrogenetion of acyl-CoA esters and transfer electrons to ETF, the electron transfer protein.; acyl-CoA dehydrogenase FadE19	complement(4216602..4217768)	Mycobacterium ulcerans Agy99	4553468
YP_907356.1	CDS	accA1	NC_008611.1	4217775	4219784	R	cytoplasmic protein; this protein carries two functions: biotin carboxyl carrier protein and biotin carboxyltransferase. involved in the first step of long-chain fatty acid synthesis [catalytic activity: ATP + biotin-carboxyl-carrier protein + CO(2) = ADP + phosphate + carboxybiotin-carboxyl-carrier protein]; acetyl-/propionyl-coenzyme a carboxylase alpha chain AccA1	complement(4217775..4219784)	Mycobacterium ulcerans Agy99	4553469
YP_907357.1	CDS	scoB	NC_008611.1	4221361	4222008	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; involved in various degradation and synthesis [catalytic activity: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxo-acyl-CoA]; succinyl-CoA:3-ketoacid-coenzyme a transferase (beta subunit) ScoB	complement(4221361..4222008)	Mycobacterium ulcerans Agy99	4553471
YP_907358.1	CDS	scoA	NC_008611.1	4222164	4222910	R	cytoplasmic protein; involved in fatty acid degradation/synthesis [catalytic activity: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxo-acyl-CoA]; succinyl-CoA:3-ketoacid-coenzyme a transferase (alpha subunit) ScoA	complement(4222164..4222910)	Mycobacterium ulcerans Agy99	4553472
YP_907359.1	CDS	MUL_3784	NC_008611.1	4223284	4224330	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4223284..4224330)	Mycobacterium ulcerans Agy99	4553474
YP_907360.1	CDS	MUL_3785	NC_008611.1	4226155	4226790	D	cytoplasmic protein; involved in transcriptional mechanism.; putative regulatory protein	4226155..4226790	Mycobacterium ulcerans Agy99	4553475
YP_907361.1	CDS	MUL_3786	NC_008611.1	4227021	4227812	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; proline rich membrane protein	4227021..4227812	Mycobacterium ulcerans Agy99	4553476
YP_907362.1	CDS	MUL_3787	NC_008611.1	4227809	4229137	R	membrane protein; integral membrane leucine and alanine rich protein	complement(4227809..4229137)	Mycobacterium ulcerans Agy99	4553477
YP_907363.1	CDS	MUL_3788	NC_008611.1	4229233	4230039	D	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short-chain type dehydrogenase/reductase	4229233..4230039	Mycobacterium ulcerans Agy99	4553478
YP_907364.1	CDS	orn	NC_008611.1	4231764	4232411	D	3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease	4231764..4232411	Mycobacterium ulcerans Agy99	4554333
YP_907365.1	CDS	MUL_3792	NC_008611.1	4232597	4233298	R	membrane protein; hypothetical protein	complement(4232597..4233298)	Mycobacterium ulcerans Agy99	4554335
YP_907366.1	CDS	MUL_3793	NC_008611.1	4233262	4234050	R	cytoplasmic protein; involved in transcriptional mechanism.; putative regulatory protein	complement(4233262..4234050)	Mycobacterium ulcerans Agy99	4554336
YP_907367.1	CDS	yrbE5A	NC_008611.1	4234348	4235217	D	membrane protein; function unknown, YrbE family protein that is similar to Ttg2B-like ABC-type transport system involved in resistance to organic solvents, permease component.; YrbE family protein, YrbE5A	4234348..4235217	Mycobacterium ulcerans Agy99	4554337
YP_907368.1	CDS	mce5A	NC_008611.1	4236107	4237639	D	membrane protein; this family of proteins contains the Mce (mycobacterial cell entry) proteins from mycobacterium tuberculosis. the archetype (Rv0169), was isolated as being necessary for colonisation of, and survival within, the macrophage. this family contains proteins of unknown function from other bacteria.; Mce protein, Mce5A	4236107..4237639	Mycobacterium ulcerans Agy99	4554339
YP_907369.1	CDS	mce5B	NC_008611.1	4237636	4238691	D	membrane protein; this family of proteins contains the Mce (mycobacterial cell entry) proteins from mycobacterium tuberculosis. the archetype (Rv0169), was isolated as being necessary for colonisation of, and survival within, the macrophage. this family contains proteins of unknown function from other bacteria.; Mce family protein, Mce5B	4237636..4238691	Mycobacterium ulcerans Agy99	4554340
YP_907370.1	CDS	mce5C	NC_008611.1	4238684	4239739	D	membrane protein; this family of proteins contains the Mce (mycobacterial cell entry) proteins from mycobacterium tuberculosis. the archetype (Rv0169), was isolated as being necessary for colonisation of, and survival within, the macrophage. this family contains proteins of unknown function from other bacteria.; Mce family protein, Mce5C	4238684..4239739	Mycobacterium ulcerans Agy99	4554341
YP_907371.1	CDS	mce5E	NC_008611.1	4240851	4242056	D	membrane protein; this family of proteins contains the Mce (mycobacterial cell entry) proteins from mycobacterium tuberculosis. the archetype (Rv0169), was isolated as being necessary for colonisation of, and survival within, the macrophage. this family contains proteins of unknown function from other bacteria.; Mce family protein, Mce5E	4240851..4242056	Mycobacterium ulcerans Agy99	4554343
YP_907372.1	CDS	mce5F	NC_008611.1	4242053	4243303	D	membrane protein; this family of proteins contains the Mce (mycobacterial cell entry) proteins from mycobacterium tuberculosis. the archetype (Rv0169), was isolated as being necessary for colonisation of, and survival within, the macrophage. this family contains proteins of unknown function from other bacteria.; Mce family protein Mce5F	4242053..4243303	Mycobacterium ulcerans Agy99	4554344
YP_907373.1	CDS	MUL_3802	NC_008611.1	4243331	4244023	D	cytoplasmic protein; hypothetical protein	4243331..4244023	Mycobacterium ulcerans Agy99	4554345
YP_907374.1	CDS	MUL_3803	NC_008611.1	4244042	4244821	D	secreted protein; hypothetical protein	4244042..4244821	Mycobacterium ulcerans Agy99	4554346
YP_907375.1	CDS	lppS	NC_008611.1	4244823	4246025	R	secreted protein; lipoprotein LppS	complement(4244823..4246025)	Mycobacterium ulcerans Agy99	4554347
YP_907376.1	CDS	MUL_3805	NC_008611.1	4246026	4246163	D	secreted protein; hypothetical protein	4246026..4246163	Mycobacterium ulcerans Agy99	4554348
YP_907377.1	CDS	MUL_3808	NC_008611.1	4246971	4247855	D	cytoplasmic protein; function unknown but domain identity suggests PlsC, phosphate acyltransferase. these enzymes function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2- acylglycerolphosphoethanolamine acyltransferase activities.; hypothetical protein	4246971..4247855	Mycobacterium ulcerans Agy99	4554252
YP_907378.1	CDS	MUL_3809	NC_008611.1	4248048	4249787	D	membrane protein; hypothetical protein	4248048..4249787	Mycobacterium ulcerans Agy99	4554253
YP_907379.1	CDS	MUL_3810	NC_008611.1	4249899	4250126	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(4249899..4250126)	Mycobacterium ulcerans Agy99	4554254
YP_907380.1	CDS	bcp	NC_008611.1	4250234	4250707	D	Detected in the cytoplasmic and membrane fractiond and in the secreted proteins by 2D-LC-MS/MS.; cytoplasmic protein; putative antioxidant protein.; bacterioferritin comigratory protein Bcp	4250234..4250707	Mycobacterium ulcerans Agy99	4554255
YP_907381.1	CDS	argE	NC_008611.1	4250708	4252033	R	cytoplasmic protein; deacetylates acetylornithine and hydrolyses N- acetylmethionine.; hypothetical protein	complement(4250708..4252033)	Mycobacterium ulcerans Agy99	4554256
YP_907382.1	CDS	MUL_3814	NC_008611.1	4253214	4253870	D	cytoplasmic protein; regulator part of the two component regulatory system.; two component transcriptional regulator	4253214..4253870	Mycobacterium ulcerans Agy99	4554258
YP_907383.1	CDS	acpS	NC_008611.1	4255894	4256286	R	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase	complement(4255894..4256286)	Mycobacterium ulcerans Agy99	4554261
YP_907384.1	CDS	fas	NC_008611.1	4256315	4265533	R	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasm.; membrane protein; involved in lipid metabolism. fatty acid synthase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; fatty acid synthase Fas	complement(4256315..4265533)	Mycobacterium ulcerans Agy99	4554262
YP_907385.1	CDS	MUL_3819	NC_008611.1	4266041	4266763	R	secreted protein; hypothetical protein	complement(4266041..4266763)	Mycobacterium ulcerans Agy99	4554263
YP_907386.1	CDS	MUL_3820	NC_008611.1	4267005	4268147	D	may act to bind either a ubiquinol or plastoquinol anion, transferring an electron to the 2Fe-2S cluster, then releasing the electron to a cytochrome C or cytochrome F haem iron.; ring-hydroxylating dioxygenase, large terminal subunit	4267005..4268147	Mycobacterium ulcerans Agy99	4554264
YP_907387.1	CDS	maoC	NC_008611.1	4269736	4270182	R	cytoplasmic protein; function unknown role in lipid metabolism; contains a thioesterase/thiol ester dehydratase-isomerase superfamily domain; acyl dehydratase MaoC	complement(4269736..4270182)	Mycobacterium ulcerans Agy99	4554266
YP_907388.1	CDS	MUL_3823	NC_008611.1	4270179	4270697	R	cytoplasmic protein; function unknown but like d/s ORF it contains a thioesterase/thiol ester dehydrase-isomerase superfmaily domain.; hypothetical protein	complement(4270179..4270697)	Mycobacterium ulcerans Agy99	4554267
YP_907389.1	CDS	MUL_3824	NC_008611.1	4270721	4271164	R	Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; hypothetical protein	complement(4270721..4271164)	Mycobacterium ulcerans Agy99	4554268
YP_907390.1	CDS	MUL_3826	NC_008611.1	4273115	4274791	D	membrane protein; function unknown, possibly involved in transport of drug across the membrane. contains AraJ, arabinose efflux permease domain identity.; hypothetical protein	4273115..4274791	Mycobacterium ulcerans Agy99	4554145
YP_907391.1	CDS	MUL_3827	NC_008611.1	4275071	4276117	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4275071..4276117)	Mycobacterium ulcerans Agy99	4554146
YP_907392.1	CDS	MUL_3828	NC_008611.1	4276335	4276601	R	cytoplasmic protein; function unknown but acetyl-CoA synthetase-like superfamily domain detected.; hypothetical protein	complement(4276335..4276601)	Mycobacterium ulcerans Agy99	4554147
YP_907393.1	CDS	MUL_3829	NC_008611.1	4276666	4277793	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism. contains domain identity to phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases.; oxidoreductase	complement(4276666..4277793)	Mycobacterium ulcerans Agy99	4554148
YP_907394.1	CDS	fdxD_1	NC_008611.1	4278379	4278570	R	cytoplasmic protein; ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.; ferredoxin FdxD	complement(4278379..4278570)	Mycobacterium ulcerans Agy99	4554149
YP_907395.1	CDS	MUL_3832	NC_008611.1	4281091	4281912	D	cytoplasmic protein; involved in transcriptional mechanism.; FadR family transcriptional regulator	4281091..4281912	Mycobacterium ulcerans Agy99	4554151
YP_907396.1	CDS	MUL_3833	NC_008611.1	4282283	4283617	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	4282283..4283617	Mycobacterium ulcerans Agy99	4554152
YP_907397.1	CDS	MUL_3834	NC_008611.1	4284052	4285098	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	4284052..4285098	Mycobacterium ulcerans Agy99	4554153
YP_907398.1	CDS	MUL_3837	NC_008611.1	4288220	4289266	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4288220..4289266)	Mycobacterium ulcerans Agy99	4554156
YP_907399.1	CDS	MUL_3839	NC_008611.1	4291244	4292092	R	cytoplasmic protein; coenzyme F420-dependent oxidoreductase	complement(4291244..4292092)	Mycobacterium ulcerans Agy99	4554128
YP_907400.1	CDS	MUL_3840	NC_008611.1	4292182	4293231	D	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase	4292182..4293231	Mycobacterium ulcerans Agy99	4554129
YP_907401.1	CDS	fadE17_2	NC_008611.1	4294340	4295497	D	cytoplasmic protein; function unknown, but supposed involvement in lipid degradation.; acyl-CoA dehydrogenase FadE17	4294340..4295497	Mycobacterium ulcerans Agy99	4554131
YP_907402.1	CDS	MUL_3843	NC_008611.1	4295494	4296429	D	cytoplasmic protein; function unknown role in lipid metabolism; acyl-CoA dehydrogenase	4295494..4296429	Mycobacterium ulcerans Agy99	4554132
YP_907403.1	CDS	MUL_3844	NC_008611.1	4296426	4297919	D	cytoplasmic protein; function unknown, but involved in lipid degradation.; fatty-acid-CoA ligase	4296426..4297919	Mycobacterium ulcerans Agy99	4554133
YP_907404.1	CDS	MUL_3846	NC_008611.1	4300217	4300585	D	secreted protein; hypothetical protein	4300217..4300585	Mycobacterium ulcerans Agy99	4554135
YP_907405.1	CDS	MUL_3847	NC_008611.1	4300805	4301281	D	membrane protein; function unknown but contains a ricin-type beta- trefoil domain.; hypothetical protein	4300805..4301281	Mycobacterium ulcerans Agy99	4554136
YP_907406.1	CDS	MUL_3848	NC_008611.1	4301448	4302467	D	cytoplasmic protein; function unknown. possibly involved in transcriptional mechanism.; putative transcriptional regulatory protein	4301448..4302467	Mycobacterium ulcerans Agy99	4554137
YP_907407.1	CDS	MUL_3849	NC_008611.1	4302539	4303744	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS; cytoplasmic protein; metal-dependent hydrolase	4302539..4303744	Mycobacterium ulcerans Agy99	4554138
YP_907408.1	CDS	rsbU	NC_008611.1	4307110	4309143	D	cytoplasmic protein; may be involved in regulation of SigG; regulator of sigma subunit, anti-anti-sigma factor RsbU	4307110..4309143	Mycobacterium ulcerans Agy99	4554141
YP_907409.1	CDS	MUL_3854	NC_008611.1	4309156	4310391	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase	complement(4309156..4310391)	Mycobacterium ulcerans Agy99	4554142
YP_907410.1	CDS	MUL_3858	NC_008611.1	4313093	4313902	D	hypothetical protein	4313093..4313902	Mycobacterium ulcerans Agy99	4553893
YP_907411.1	CDS	MUL_3859	NC_008611.1	4313899	4314561	D	cytoplasmic protein; hypothetical protein	4313899..4314561	Mycobacterium ulcerans Agy99	4553894
YP_907412.1	CDS	cyp187A4	NC_008611.1	4314847	4316073	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 187A4 Cyp187A4	4314847..4316073	Mycobacterium ulcerans Agy99	4553895
YP_907413.1	CDS	adhB_1	NC_008611.1	4316070	4317224	D	cytoplasmic protein; thought to catalyze the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. probably acts on primary or secondary alcohols or hemiacetals [catalytic activity: an alcohol + NAD+ = an aldehyde or ketone + NADH]; zinc-containing alcohol dehydrogenase NAD dependent AdhB	4316070..4317224	Mycobacterium ulcerans Agy99	4553896
YP_907414.1	CDS	MUL_3862	NC_008611.1	4317167	4318081	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; short chain dehydrogenase	complement(4317167..4318081)	Mycobacterium ulcerans Agy99	4553897
YP_907415.1	CDS	cyp108B4	NC_008611.1	4318186	4319418	R	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 108B4 Cyp108B4	complement(4318186..4319418)	Mycobacterium ulcerans Agy99	4553898
YP_907416.1	CDS	accD4_2	NC_008611.1	4319609	4321105	D	cytoplasmic protein; key enzyme in the catabolic pathway of odd-chain fatty acids, isoleucine, threonine, methionine, and valine [catalytic activity: ATP + propionyl-CoA + CO(2) + H(2)O = ADP + orthophosphate + methylmalonyl-CoA]; propionyl-CoA carboxylase beta chain 4 AccD4_2	4319609..4321105	Mycobacterium ulcerans Agy99	4553899
YP_907417.1	CDS	MUL_3865	NC_008611.1	4321095	4322645	R	May not be functional. C-term of the dehydrogenase section missing 40 aa. may be site of DNA deletion, resulting in a translation fusion with a d/s ORF . C-term contains full length of an uncharacterized homolog of a gamma-carboxymuconolactone decarboxylase subunit; membrane protein; dehydrogenase/decarboxylase protein	complement(4321095..4322645)	Mycobacterium ulcerans Agy99	4553900
YP_907418.1	CDS	MUL_3866	NC_008611.1	4322829	4323875	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(4322829..4323875)	Mycobacterium ulcerans Agy99	4553901
YP_907419.1	CDS	MUL_3867	NC_008611.1	4323872	4324255	R	cytoplasmic protein; function unknown but contains a Ntf2-like superfmaily domain; hypothetical protein	complement(4323872..4324255)	Mycobacterium ulcerans Agy99	4553902
YP_907420.1	CDS	MUL_3868	NC_008611.1	4324252	4324488	R	secreted protein; hypothetical protein	complement(4324252..4324488)	Mycobacterium ulcerans Agy99	4553903
YP_907421.1	CDS	MUL_3869	NC_008611.1	4324619	4325236	D	cytoplasmic protein; function unknown but contains thioesterase/thiol ester dehydrase-isomerase superfmaily domain; hypothetical protein	4324619..4325236	Mycobacterium ulcerans Agy99	4553904
YP_907422.1	CDS	fadD19_2	NC_008611.1	4325324	4326967	D	activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase	4325324..4326967	Mycobacterium ulcerans Agy99	4553905
YP_907423.1	CDS	MUL_3871	NC_008611.1	4327067	4328113	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4327067..4328113)	Mycobacterium ulcerans Agy99	4553906
YP_907424.1	CDS	cyp187A5	NC_008611.1	4328422	4329636	D	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 187A5 Cyp187A5	4328422..4329636	Mycobacterium ulcerans Agy99	4553907
YP_907425.1	CDS	MUL_3873	NC_008611.1	4329769	4330860	D	cytoplasmic protein; dehydratase	4329769..4330860	Mycobacterium ulcerans Agy99	4553908
YP_907426.1	CDS	MUL_3874	NC_008611.1	4330882	4332063	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase	complement(4330882..4332063)	Mycobacterium ulcerans Agy99	4553909
YP_907427.1	CDS	MUL_3876	NC_008611.1	4333139	4333975	R	cytoplasmic protein; metal-dependent hydrolase	complement(4333139..4333975)	Mycobacterium ulcerans Agy99	4553911
YP_907428.1	CDS	MUL_3878	NC_008611.1	4335626	4336831	R	cytoplasmic protein; metal-dependent hydrolase	complement(4335626..4336831)	Mycobacterium ulcerans Agy99	4553785
YP_907429.1	CDS	echA12_1	NC_008611.1	4336860	4337702	R	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(4336860..4337702)	Mycobacterium ulcerans Agy99	4553786
YP_907430.1	CDS	MUL_3882	NC_008611.1	4338801	4339445	R	cytoplasmic protein; hypothetical protein	complement(4338801..4339445)	Mycobacterium ulcerans Agy99	4553788
YP_907431.1	CDS	MUL_3883	NC_008611.1	4339666	4339995	D	cytoplasmic protein; hypothetical protein	4339666..4339995	Mycobacterium ulcerans Agy99	4553789
YP_907432.1	CDS	MUL_3884	NC_008611.1	4340399	4341202	D	cytoplasmic protein; involved in transcriptional mechanism; transcriptional regulatory protein	4340399..4341202	Mycobacterium ulcerans Agy99	4553790
YP_907433.1	CDS	echA4_2	NC_008611.1	4341215	4342111	R	cytoplasmic protein; oxidizes fatty acids using specific components [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA4_2	complement(4341215..4342111)	Mycobacterium ulcerans Agy99	4553791
YP_907434.1	CDS	MUL_3886	NC_008611.1	4342108	4342782	R	cytoplasmic protein; hypothetical protein	complement(4342108..4342782)	Mycobacterium ulcerans Agy99	4553792
YP_907435.1	CDS	echA10_1	NC_008611.1	4342902	4343720	D	cytoplasmic protein; oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase EchA10	4342902..4343720	Mycobacterium ulcerans Agy99	4553793
YP_907436.1	CDS	echA11_1	NC_008611.1	4343717	4344535	D	cytoplasmic protein; oxidizes fatty acids using specific components [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase EchA11	4343717..4344535	Mycobacterium ulcerans Agy99	4553794
YP_907437.1	CDS	echA16_1	NC_008611.1	4344526	4345341	D	cytoplasmic protein; oxidizes fatty acids using specific components [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase EchA16	4344526..4345341	Mycobacterium ulcerans Agy99	4553795
YP_907438.1	CDS	MUL_3890	NC_008611.1	4345341	4346822	D	cytoplasmic protein; function unknown, but supposed involvement in lipid degradation.; long-chain fatty-acid CoA ligase	4345341..4346822	Mycobacterium ulcerans Agy99	4553796
YP_907439.1	CDS	MUL_3893	NC_008611.1	4350245	4350610	R	secreted protein; hypothetical protein	complement(4350245..4350610)	Mycobacterium ulcerans Agy99	4553799
YP_907440.1	CDS	MUL_3894	NC_008611.1	4350811	4351524	R	cytoplasmic protein; possibly involved in transcriptional mechanism.; GntR family transcriptional regulator	complement(4350811..4351524)	Mycobacterium ulcerans Agy99	4553800
YP_907441.1	CDS	MUL_3895	NC_008611.1	4351538	4352731	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase	complement(4351538..4352731)	Mycobacterium ulcerans Agy99	4553801
YP_907442.1	CDS	MUL_3896	NC_008611.1	4352728	4353957	R	function unknown, but supposed involvement in lipid degradation.; acyl-CoA transferase/carnitine dehydratase	complement(4352728..4353957)	Mycobacterium ulcerans Agy99	4553802
YP_907443.1	CDS	fabG	NC_008611.1	4355179	4355931	R	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	complement(4355179..4355931)	Mycobacterium ulcerans Agy99	4553714
YP_907444.1	CDS	MUL_3901	NC_008611.1	4357441	4359180	R	membrane protein; thought to be involved in active transport of drugs across the membrane (export): multidrugs resistance by an export mechanism. responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; transmembrane ABC transporter ATP-binding protein	complement(4357441..4359180)	Mycobacterium ulcerans Agy99	4553717
YP_907445.1	CDS	MUL_3902	NC_008611.1	4359177	4361801	R	membrane protein; thought to be involved in active transport of drugs across the membrane (export): multidrugs resistance by an export mechanism. responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; transmembrane ABC transporter ATP-binding protein	complement(4359177..4361801)	Mycobacterium ulcerans Agy99	4553718
YP_907446.1	CDS	lprD	NC_008611.1	4362538	4362930	D	membrane protein; lipoprotein LprD	4362538..4362930	Mycobacterium ulcerans Agy99	4553720
YP_907447.1	CDS	MUL_3905	NC_008611.1	4362927	4363289	D	membrane protein; hypothetical protein	4362927..4363289	Mycobacterium ulcerans Agy99	4553721
YP_907448.1	CDS	MUL_3906	NC_008611.1	4363309	4363923	R	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase	complement(4363309..4363923)	Mycobacterium ulcerans Agy99	4553722
YP_907449.1	CDS	MUL_3907	NC_008611.1	4364076	4364618	R	membrane protein; hypothetical protein	complement(4364076..4364618)	Mycobacterium ulcerans Agy99	4553723
YP_907450.1	CDS	rph	NC_008611.1	4364899	4365678	R	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH	complement(4364899..4365678)	Mycobacterium ulcerans Agy99	4553724
YP_907451.1	CDS	MUL_3909	NC_008611.1	4365780	4366553	R	cytoplasmic protein; metal-dependent hydrolase	complement(4365780..4366553)	Mycobacterium ulcerans Agy99	4553725
YP_907452.1	CDS	MUL_3910	NC_008611.1	4366553	4366732	R	cytoplasmic protein; hypothetical protein	complement(4366553..4366732)	Mycobacterium ulcerans Agy99	4553726
YP_907453.1	CDS	MUL_3911	NC_008611.1	4366931	4367662	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	4366931..4367662	Mycobacterium ulcerans Agy99	4553727
YP_907454.1	CDS	aceE_1	NC_008611.1	4367929	4370256	R	cytoplasmic protein; involved in energy metabolism; contributes to acetyl-CoA production as part of pyruvate dehydrogenase complex [catalytic activity: pyruvate + lipoamide = S- acetyl-dihydro-lipoamide + CO(2)]; pyruvate dehydrogenase E1 component AceE	complement(4367929..4370256)	Mycobacterium ulcerans Agy99	4553728
YP_907455.1	CDS	MUL_3913	NC_008611.1	4370365	4370883	D	cytoplasmic protein; involved in transcriptional mechanism.; Lrp/AsnC family transcriptional regulator	4370365..4370883	Mycobacterium ulcerans Agy99	4553729
YP_907456.1	CDS	MUL_3914	NC_008611.1	4371250	4371750	D	secreted protein; hypothetical protein	4371250..4371750	Mycobacterium ulcerans Agy99	4553730
YP_907457.1	CDS	yrbE3A_1	NC_008611.1	4372513	4373280	D	membrane protein; integral membrane protein YrbE3A	4372513..4373280	Mycobacterium ulcerans Agy99	4553585
YP_907458.1	CDS	yrbE3B_1	NC_008611.1	4373277	4374131	D	membrane protein; integral membrane protein YrbE3B	4373277..4374131	Mycobacterium ulcerans Agy99	4553586
YP_907459.1	CDS	mce3A_1	NC_008611.1	4374136	4375596	D	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce3A	4374136..4375596	Mycobacterium ulcerans Agy99	4553587
YP_907460.1	CDS	mce3B_1	NC_008611.1	4375676	4376707	D	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce3B	4375676..4376707	Mycobacterium ulcerans Agy99	4553588
YP_907461.1	CDS	mce3C_1	NC_008611.1	4376704	4378020	D	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein, Mce3C	4376704..4378020	Mycobacterium ulcerans Agy99	4553589
YP_907462.1	CDS	mce3D_1	NC_008611.1	4378017	4379348	D	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce3D	4378017..4379348	Mycobacterium ulcerans Agy99	4553590
YP_907463.1	CDS	lprM_1	NC_008611.1	4379348	4380490	D	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE family lipoprotein LprM	4379348..4380490	Mycobacterium ulcerans Agy99	4553591
YP_907464.1	CDS	mce3F_1	NC_008611.1	4380492	4381949	D	membrane protein; function unknown, but thought involved in host cell invasion.; MCE-family protein Mce3F	4380492..4381949	Mycobacterium ulcerans Agy99	4553592
YP_907465.1	CDS	MUL_3924	NC_008611.1	4381946	4382647	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; Mce associated membrane protein	4381946..4382647	Mycobacterium ulcerans Agy99	4553593
YP_907466.1	CDS	murI	NC_008611.1	4382690	4383505	R	converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase	complement(4382690..4383505)	Mycobacterium ulcerans Agy99	4553594
YP_907467.1	CDS	cfp10A	NC_008611.1	4384351	4384623	R	secreted protein; antigen Cfp10A	complement(4384351..4384623)	Mycobacterium ulcerans Agy99	4553596
YP_907468.1	CDS	MUL_3928	NC_008611.1	4384645	4385058	R	cytoplasmic protein; function unknown but domain identity suggests this CDS encodes a metal-dependent protease of the Pad1/Jab1 superfamily.; hypothetical protein	complement(4384645..4385058)	Mycobacterium ulcerans Agy99	4553597
YP_907469.1	CDS	dmpA	NC_008611.1	4385060	4386148	R	membrane protein; function unknown, probable role in amino acid hydrolysis; L-aminopeptidase/D-esterase DmpA	complement(4385060..4386148)	Mycobacterium ulcerans Agy99	4553598
YP_907470.1	CDS	MUL_3930	NC_008611.1	4386145	4386732	R	cytoplasmic protein; hypothetical protein	complement(4386145..4386732)	Mycobacterium ulcerans Agy99	4553599
YP_907471.1	CDS	MUL_3931	NC_008611.1	4386757	4386969	R	cytoplasmic protein; function unknown but contains a ClpS domain suggesting a function related to ATP-dependent protein degradation.; hypothetical protein	complement(4386757..4386969)	Mycobacterium ulcerans Agy99	4553600
YP_907472.1	CDS	pncB	NC_008611.1	4387128	4388444	D	catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase	4387128..4388444	Mycobacterium ulcerans Agy99	4553601
YP_907473.1	CDS	dinG	NC_008611.1	4388480	4390501	D	cytoplasmic protein; probable helicase involved in DNA repair and perhaps also replication.; ATP-dependent helicase DinG	4388480..4390501	Mycobacterium ulcerans Agy99	4553602
YP_907474.1	CDS	glgP	NC_008611.1	4390498	4393089	R	cytoplasmic protein; catalytic activity : {(1,4)-alpha-D-glucosyl}(N) + phosphate = {(1,4)-alpha-D-glucosyl}(N-1) + alpha-D- glucose 1-phosphate.; glycogen phosphorylase GlgP	complement(4390498..4393089)	Mycobacterium ulcerans Agy99	4553603
YP_907475.1	CDS	MUL_3935	NC_008611.1	4393279	4395366	D	also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; function unknown, may be involved in polysaccharide degradation.; glycosidase	4393279..4395366	Mycobacterium ulcerans Agy99	4553604
YP_907476.1	CDS	glgB	NC_008611.1	4395373	4397568	D	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein	4395373..4397568	Mycobacterium ulcerans Agy99	4552503
YP_907477.1	CDS	MUL_3937	NC_008611.1	4397635	4398549	R	Also detected in the extracellular matrix and secreted fraction by proteomics.; extracellular matrix protein; thioredoxin participates in various redox reactions through the reversible oxidation of its active center dithiol, to a disulfide, & catalyzes dithiol-disulfide exchange reactions; thioredoxin	complement(4397635..4398549)	Mycobacterium ulcerans Agy99	4552504
YP_907478.1	CDS	fadA4	NC_008611.1	4398727	4399908	R	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase	complement(4398727..4399908)	Mycobacterium ulcerans Agy99	4552505
YP_907479.1	CDS	gloA_1	NC_008611.1	4399991	4400458	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; glyoxalase I (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway.; glyoxalase GloA	4399991..4400458	Mycobacterium ulcerans Agy99	4552506
YP_907480.1	CDS	MUL_3940	NC_008611.1	4400771	4401451	R	cytoplasmic protein; function unknown but contains a predicted nuclease domain of the RecB family; hypothetical protein	complement(4400771..4401451)	Mycobacterium ulcerans Agy99	4552507
YP_907481.1	CDS	MUL_3941	NC_008611.1	4401542	4402876	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(4401542..4402876)	Mycobacterium ulcerans Agy99	4552508
YP_907482.1	CDS	MUL_3943	NC_008611.1	4404115	4405161	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	4404115..4405161	Mycobacterium ulcerans Agy99	4552510
YP_907483.1	CDS	MUL_3944	NC_008611.1	4406071	4407690	D	membrane protein; thought to play a role in regulation of cellular metabolism by catalysing the synthesis of a second messenger, camp [catalytic activity: ATP = 3',5'-cyclic AMP + pyrophosphate]; adenylate cyclase	4406071..4407690	Mycobacterium ulcerans Agy99	4552511
YP_907484.1	CDS	alkA	NC_008611.1	4407773	4409260	D	cytoplasmic protein; involved in damage reversal and in base excision repair. the methylated Ada protein acts as a positive regulator of its own synthesis, as well as that of other proteins. the transcription-activating function of the Ada protein resides in its N-terminus. repair of alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. this is a suicide reaction: the enzyme is irreversibly inactivated. can also repair O-4- methylthymine [catalytic activity: DNA (containing 6-O- methylguanine) + [protein]-L-cysteine = DNA (without 6-O- methylguanine) + protein S-methyl-L-cysteine]; Ada regulatory protein AlkA	4407773..4409260	Mycobacterium ulcerans Agy99	4552512
YP_907485.1	CDS	ogt	NC_008611.1	4409257	4409775	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; repair of alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. this is a suicide reaction: the enzyme is irreversibly inactivated [catalytic activity : DNA (containing 6-O-methylguanine) + [protein]-L-cysteine = DNA (without 6-O-methylguanine) + protein S-methyl-L-cysteine]; methylated-DNA--protein-cysteine methyltransferase Ogt	4409257..4409775	Mycobacterium ulcerans Agy99	4552513
YP_907486.1	CDS	murA	NC_008611.1	4415229	4416482	R	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	complement(4415229..4416482)	Mycobacterium ulcerans Agy99	4552517
YP_907487.1	CDS	MUL_3951	NC_008611.1	4416553	4417146	D	Detected in the cytoplamic fraction by LC-MS/MS. Also detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; these proteins convert inactive cobalamins to AdoCbl for 1,2-propanediol degradation.; cobalamin adenosyltransferase	4416553..4417146	Mycobacterium ulcerans Agy99	4552587
YP_907488.1	CDS	MUL_3952	NC_008611.1	4417237	4417680	R	cytoplasmic protein; hypothetical protein	complement(4417237..4417680)	Mycobacterium ulcerans Agy99	4552588
YP_907489.1	CDS	atpC	NC_008611.1	4417688	4418068	R	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon	complement(4417688..4418068)	Mycobacterium ulcerans Agy99	4552589
YP_907490.1	CDS	atpD	NC_008611.1	4418105	4419556	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta	complement(4418105..4419556)	Mycobacterium ulcerans Agy99	4552590
YP_907491.1	CDS	atpG	NC_008611.1	4419585	4420499	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma	complement(4419585..4420499)	Mycobacterium ulcerans Agy99	4552591
YP_907492.1	CDS	atpA	NC_008611.1	4420518	4422167	R	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha	complement(4420518..4422167)	Mycobacterium ulcerans Agy99	4552592
YP_907493.1	CDS	atpH	NC_008611.1	4422229	4423566	R	produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta	complement(4422229..4423566)	Mycobacterium ulcerans Agy99	4552593
YP_907494.1	CDS	atpF	NC_008611.1	4423573	4424085	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B	complement(4423573..4424085)	Mycobacterium ulcerans Agy99	4552594
YP_907495.1	CDS	atpE	NC_008611.1	4424127	4424372	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C	complement(4424127..4424372)	Mycobacterium ulcerans Agy99	4552595
YP_907496.1	CDS	atpB	NC_008611.1	4424463	4425215	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A	complement(4424463..4425215)	Mycobacterium ulcerans Agy99	4552596
YP_907497.1	CDS	MUL_3961	NC_008611.1	4425184	4425708	R	membrane protein; hypothetical protein	complement(4425184..4425708)	Mycobacterium ulcerans Agy99	4552597
YP_907498.1	CDS	rfe	NC_008611.1	4425958	4427139	R	membrane protein; catalysis of the first step of the lipid cycle reactions in the biosynthesis of cell wall peptidoglycan.; undecapaprenyl-phosphate alpha-N- acetylglucosaminyltransferase Rfe	complement(4425958..4427139)	Mycobacterium ulcerans Agy99	4552598
YP_907499.1	CDS	MUL_3963	NC_008611.1	4427218	4427868	R	function unknown but contains YrdC domain. this domain has been shown to preferentially bind to dsRNA.; hypothetical protein	complement(4427218..4427868)	Mycobacterium ulcerans Agy99	4552599
YP_907500.1	CDS	hemK	NC_008611.1	4427921	4428769	R	cytoplasmic protein; function unknown but may have S-adenosyl-methionine- dependent methyltransferase activity.; modification methylase HemK	complement(4427921..4428769)	Mycobacterium ulcerans Agy99	4552600
YP_907501.1	CDS	prfA	NC_008611.1	4428766	4429839	R	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1	complement(4428766..4429839)	Mycobacterium ulcerans Agy99	4552601
YP_907502.1	CDS	rpmE	NC_008611.1	4429927	4430172	R	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31	complement(4429927..4430172)	Mycobacterium ulcerans Agy99	4552602
YP_907503.1	CDS	rho	NC_008611.1	4430364	4432229	R	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho	complement(4430364..4432229)	Mycobacterium ulcerans Agy99	4552603
YP_907504.1	CDS	thrB	NC_008611.1	4432496	4433440	R	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase	complement(4432496..4433440)	Mycobacterium ulcerans Agy99	4552604
YP_907505.1	CDS	thrC	NC_008611.1	4433496	4434578	R	catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase	complement(4433496..4434578)	Mycobacterium ulcerans Agy99	4552605
YP_907506.1	CDS	thrA	NC_008611.1	4434575	4435900	R	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase	complement(4434575..4435900)	Mycobacterium ulcerans Agy99	4551394
YP_907507.1	CDS	lysA	NC_008611.1	4435904	4437322	R	cytoplasmic protein; involved in biosynthesis of lysine (last step) [catalytic activity : meso-2,6-diaminoheptanedioate = L- lysine + CO(2)]; diaminopimelate decarboxylase LysA	complement(4435904..4437322)	Mycobacterium ulcerans Agy99	4551395
YP_907508.1	CDS	argS	NC_008611.1	4437319	4438971	R	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase	complement(4437319..4438971)	Mycobacterium ulcerans Agy99	4551396
YP_907509.1	CDS	MUL_3974	NC_008611.1	4439665	4439940	D	cytoplasmic protein; hypothetical protein	4439665..4439940	Mycobacterium ulcerans Agy99	4551398
YP_907510.1	CDS	MUL_3975	NC_008611.1	4440081	4440611	R	membrane protein; PE-PGRS family protein	complement(4440081..4440611)	Mycobacterium ulcerans Agy99	4551399
YP_907511.1	CDS	MUL_3976	NC_008611.1	4441115	4443784	D	cytoplasmic protein; this family of dehydrogenases act on aldehyde substrates. members use NADP as a cofactor.; bifunctional acetaldehyde-CoA/alcohol dehydrogenase	4441115..4443784	Mycobacterium ulcerans Agy99	4551400
YP_907512.1	CDS	MUL_3977	NC_008611.1	4443750	4444127	R	cytoplasmic protein; pyridoxamine 5'-phosphate oxidase is a FMN flavoprotein involved in the de novo synthesis of pyridoxine (vitamin B6) and pyridoxal phosphate.; pyridoxamine 5'-phosphate oxidase-related protein	complement(4443750..4444127)	Mycobacterium ulcerans Agy99	4551401
YP_907513.1	CDS	MUL_3978	NC_008611.1	4444223	4444594	R	cytoplasmic protein; function unknown but contains YCII-related protein domain; hypothetical protein	complement(4444223..4444594)	Mycobacterium ulcerans Agy99	4551402
YP_907514.1	CDS	dhaA	NC_008611.1	4444575	4445447	R	catalyzes the cleavage of carbon-halogen bonds in aliphatic compounds forming a primary alcohol and a halide; haloalkane dehalogenase	complement(4444575..4445447)	Mycobacterium ulcerans Agy99	4551403
YP_907515.1	CDS	MUL_3980	NC_008611.1	4445498	4447288	R	cytoplasmic protein; cleaves xaa-pro-releasing N-terminal dipeptides.; peptidase S15	complement(4445498..4447288)	Mycobacterium ulcerans Agy99	4551404
YP_907516.1	CDS	MUL_3981	NC_008611.1	4447429	4448076	D	cytoplasmic protein; function unknown but belongs to the TetR family of bacterial transcriptional regulatory proteins.; putative regulatory protein	4447429..4448076	Mycobacterium ulcerans Agy99	4551405
YP_907517.1	CDS	MUL_3982	NC_008611.1	4448086	4448598	R	membrane protein; PE-PGRS family protein	complement(4448086..4448598)	Mycobacterium ulcerans Agy99	4551406
YP_907518.1	CDS	MUL_3983	NC_008611.1	4448729	4449634	R	cytoplasmic protein; function unknown, belongs to the LysR family of transcriptional regulators; putative regulatory protein	complement(4448729..4449634)	Mycobacterium ulcerans Agy99	4551407
YP_907519.1	CDS	MUL_3984	NC_008611.1	4449725	4451053	D	membrane protein; function unknown role in transport. belongs to the DMT superfamily.; membrane permease	4449725..4451053	Mycobacterium ulcerans Agy99	4551408
YP_907520.1	CDS	MUL_3985	NC_008611.1	4451034	4451585	D	membrane protein; hypothetical protein	4451034..4451585	Mycobacterium ulcerans Agy99	4551409
YP_907521.1	CDS	MUL_3986	NC_008611.1	4451780	4453366	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; thought to play a role in regulation of cellular metabolism by catalysing the synthesis of a second messenger, camp [catalytic activity: ATP = 3',5'-cyclic AMP + pyrophosphate]; adenylate cyclase	4451780..4453366	Mycobacterium ulcerans Agy99	4551410
YP_907522.1	CDS	MUL_3987	NC_008611.1	4453532	4453873	D	secreted protein; hypothetical protein	4453532..4453873	Mycobacterium ulcerans Agy99	4551411
YP_907523.1	CDS	MUL_3990	NC_008611.1	4456652	4457851	R	membrane protein; PE-PGRS family protein	complement(4456652..4457851)	Mycobacterium ulcerans Agy99	4550730
YP_907524.1	CDS	MUL_3991	NC_008611.1	4457949	4458821	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; flavin-dependent oxidoreductase	complement(4457949..4458821)	Mycobacterium ulcerans Agy99	4550731
YP_907525.1	CDS	gloA_2	NC_008611.1	4458867	4459289	D	cytoplasmic protein; catalyzes the first step of the glyoxal pathway; glyoxalase GloA	4458867..4459289	Mycobacterium ulcerans Agy99	4550732
YP_907526.1	CDS	MUL_3993	NC_008611.1	4459382	4459771	D	cytoplasmic protein; function unknown but contains glyoxalase/bleomycin resistance protein/Dihydroxybiphenyl dioxygenase superfamily domain.; hypothetical protein	4459382..4459771	Mycobacterium ulcerans Agy99	4550733
YP_907527.1	CDS	MUL_3994	NC_008611.1	4459768	4460253	R	cytoplasmic protein; putative transcriptional regulatory protein	complement(4459768..4460253)	Mycobacterium ulcerans Agy99	4550734
YP_907528.1	CDS	cysN	NC_008611.1	4460347	4462197	R	in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase	complement(4460347..4462197)	Mycobacterium ulcerans Agy99	4550735
YP_907529.1	CDS	cysD	NC_008611.1	4462197	4463129	R	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2	complement(4462197..4463129)	Mycobacterium ulcerans Agy99	4550736
YP_907530.1	CDS	MUL_3997	NC_008611.1	4463317	4463751	D	cytoplasmic protein; function unknown, contains a thioesterase superfamily domain; hypothetical protein	4463317..4463751	Mycobacterium ulcerans Agy99	4550737
YP_907531.1	CDS	MUL_3998	NC_008611.1	4463759	4464250	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the extracellular matrix and membrane fraction by proteomics.; membrane protein; domain identity to carbonic anhydrases. these are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide.; carbonic anhydrase	complement(4463759..4464250)	Mycobacterium ulcerans Agy99	4550738
YP_907532.1	CDS	oppB	NC_008611.1	4464573	4465550	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in active transport of oligopeptide across the membrane (import) responsible for the translocation of the substrate across the membrane.; oligopeptide-transport integral membrane protein ABC transporter OppB	4464573..4465550	Mycobacterium ulcerans Agy99	4550739
YP_907533.1	CDS	oppC	NC_008611.1	4465547	4466440	D	membrane protein; involved in active transport of oligopeptide across the membrane (import) responsible for the translocation of the substrate across the membrane.; oligopeptide-transport integral membrane protein ABC transporter OppC	4465547..4466440	Mycobacterium ulcerans Agy99	4550740
YP_907534.1	CDS	oppD	NC_008611.1	4466437	4468275	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in active transport of oligopeptide across the membrane (import) responsible for energy coupling to the transport system.; oligopeptide-transport ATP-binding protein ABC transporter OppD	4466437..4468275	Mycobacterium ulcerans Agy99	4550741
YP_907535.1	CDS	oppA	NC_008611.1	4468376	4470013	D	Also detected in the cytoplasm.; membrane protein; involved in active transport of oligopeptide across the membrane (import) this protein is a component of the oligopeptide permease, a binding protein-dependent transport system; it binds peptides up to five amino acids long with high affinity.; periplasmic oligopeptide-binding lipoprotein OppA	4468376..4470013	Mycobacterium ulcerans Agy99	4550742
YP_907536.1	CDS	MUL_4004	NC_008611.1	4471338	4472927	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism, probably electron-transfer-linked.; dehydrogenase fad flavoprotein GMC oxidoreductase	complement(4471338..4472927)	Mycobacterium ulcerans Agy99	4550744
YP_907537.1	CDS	MUL_4005	NC_008611.1	4472977	4475607	R	Detected in the cytoplamic fraction by LCMSMS; cytoplasmic protein; function unknown, contains P-loop containing nucleoside triphosphate hydrolase superfamily domain; hydrolase	complement(4472977..4475607)	Mycobacterium ulcerans Agy99	4550745
YP_907538.1	CDS	sbcD	NC_008611.1	4475604	4476755	R	cytoplasmic protein; function unknown: possible role in DNA replication, recombination, and repair.; DNA repair exonuclease SbcD	complement(4475604..4476755)	Mycobacterium ulcerans Agy99	4550746
YP_907539.1	CDS	sixA	NC_008611.1	4477041	4477544	D	cytoplasmic protein; function unknown, possible role in signal transduction; phosphohistidine phosphatase SixA	4477041..4477544	Mycobacterium ulcerans Agy99	4549954
YP_907540.1	CDS	lprC	NC_008611.1	4477604	4478182	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipoprotein LprC	complement(4477604..4478182)	Mycobacterium ulcerans Agy99	4549955
YP_907541.1	CDS	lprB	NC_008611.1	4478179	4478736	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; lipoprotein LprB	complement(4478179..4478736)	Mycobacterium ulcerans Agy99	4549956
YP_907542.1	CDS	MUL_4010	NC_008611.1	4478884	4480623	D	membrane protein; thought to be involved in active transport of drugs across the membrane (export): multidrugs resistance by an export mechanism. responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; transmembrane ABC transporter ATP-binding protein	4478884..4480623	Mycobacterium ulcerans Agy99	4549957
YP_907543.1	CDS	MUL_4011	NC_008611.1	4480620	4482542	D	membrane protein; thought to be involved in active transport of drugs across the membrane (export): multidrugs resistance by an export mechanism. responsible for energy coupling to the transport system and for the translocation of the substrate across the membrane.; transmembrane ABC transporter ATP-binding protein	4480620..4482542	Mycobacterium ulcerans Agy99	4549958
YP_907544.1	CDS	MUL_4013	NC_008611.1	4485121	4485453	D	secreted protein; hypothetical protein	4485121..4485453	Mycobacterium ulcerans Agy99	4549960
YP_907545.1	CDS	MUL_4014	NC_008611.1	4485685	4486017	D	secreted protein; hypothetical protein	4485685..4486017	Mycobacterium ulcerans Agy99	4549961
YP_907546.1	CDS	lprA	NC_008611.1	4486257	4486997	D	membrane protein; lipoprotein LprA	4486257..4486997	Mycobacterium ulcerans Agy99	4549962
YP_907547.1	CDS	MUL_4016	NC_008611.1	4487114	4487449	D	secreted protein; hypothetical protein	4487114..4487449	Mycobacterium ulcerans Agy99	4549963
YP_907548.1	CDS	MUL_4017	NC_008611.1	4487593	4488303	D	secreted protein; hypothetical protein	4487593..4488303	Mycobacterium ulcerans Agy99	4549964
YP_907549.1	CDS	embR	NC_008611.1	4488640	4489800	D	cytoplasmic protein; involved in transcriptional mechanism. thought to regulate the biosynthesis of the mycobacterial cell wall arabinan and resistance to ethambutol (Emb; dextro-2,2'- (ethylenediimino)-di-1-butanol), regulating EmbA and EmbB.; transcriptional regulatory protein EmbR	4488640..4489800	Mycobacterium ulcerans Agy99	4549965
YP_907550.1	CDS	MUL_4020	NC_008611.1	4492344	4493246	R	cytoplasmic protein; LuxR family transcriptional regulator	complement(4492344..4493246)	Mycobacterium ulcerans Agy99	4549967
YP_907551.1	CDS	citE_1	NC_008611.1	4493352	4494200	D	Detected in the cytoplasmic fraction by LC-MS/MS. Also detected in the extracellular matrix and membrane fraction by proteomics.; cytoplasmic protein; interconversion of acetate and oxaloacetate from citrate [catalytic activity: citrate = acetate + oxaloacetate]; citrate (pro-3S)-lyase subunit beta	4493352..4494200	Mycobacterium ulcerans Agy99	4549968
YP_907552.1	CDS	MUL_4022	NC_008611.1	4494188	4494715	D	Detected in the cytoplasmic fraction by LC-MS/MS. Also detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; dehydratase	4494188..4494715	Mycobacterium ulcerans Agy99	4549969
YP_907553.1	CDS	MUL_4023	NC_008611.1	4494715	4496052	D	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplamic fraction by LCMSMS; membrane protein; could be implicated in several pathways involving acetyl-CoA. E.G. acetyl-CoA hydrolase from yeast catalyses the formation of acetate from acetyl-CoA, CoA transferase (CAT1) produces succinyl-CoA, and acetate-CoA transferase utilizes  acyl-CoA and acetate to form acetyl-CoA.; acetyl-CoA hydrolase/transferase	4494715..4496052	Mycobacterium ulcerans Agy99	4549970
YP_907554.1	CDS	fadE3	NC_008611.1	4496070	4497245	D	Detected in the cytoplasmic and membrane fractionc by proteomics.; cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE3	4496070..4497245	Mycobacterium ulcerans Agy99	4549971
YP_907555.1	CDS	gdpD	NC_008611.1	4497277	4498185	R	membrane protein; hydrolyses glycerophosphodiesters such as glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol); glycerolphosphodiesterase GdpD	complement(4497277..4498185)	Mycobacterium ulcerans Agy99	4549972
YP_907556.1	CDS	MUL_4026	NC_008611.1	4498378	4498803	R	cytoplasmic protein; hypothetical protein	complement(4498378..4498803)	Mycobacterium ulcerans Agy99	4550081
YP_907557.1	CDS	MUL_4027	NC_008611.1	4498875	4499507	D	secreted protein; hypothetical protein	4498875..4499507	Mycobacterium ulcerans Agy99	4550082
YP_907558.1	CDS	gloA_3	NC_008611.1	4499576	4499995	R	cytoplasmic protein; glyoxalase I (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway.; glyoxalase GloA	complement(4499576..4499995)	Mycobacterium ulcerans Agy99	4550083
YP_907559.1	CDS	MUL_4029	NC_008611.1	4500714	4502048	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(4500714..4502048)	Mycobacterium ulcerans Agy99	4550084
YP_907560.1	CDS	MUL_4030	NC_008611.1	4502436	4503140	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	4502436..4503140	Mycobacterium ulcerans Agy99	4550085
YP_907561.1	CDS	MUL_4031	NC_008611.1	4503165	4503482	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	4503165..4503482	Mycobacterium ulcerans Agy99	4550086
YP_907562.1	CDS	MUL_4034	NC_008611.1	4504820	4505509	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(4504820..4505509)	Mycobacterium ulcerans Agy99	4550089
YP_907563.1	CDS	MUL_4035	NC_008611.1	4505592	4506947	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; possibly involved in the uptake of malate and other dicarboxylates by a proton symport mechanism. in E. coli, this protein has been implicated in resistance to tellurite.; C4-dicarboxylate transporter/malic acid transport protein	complement(4505592..4506947)	Mycobacterium ulcerans Agy99	4550090
YP_907564.1	CDS	MUL_4036	NC_008611.1	4506947	4507189	D	secreted protein; hypothetical protein	4506947..4507189	Mycobacterium ulcerans Agy99	4550091
YP_907565.1	CDS	MUL_4038	NC_008611.1	4508056	4508760	R	membrane protein; hypothetical protein	complement(4508056..4508760)	Mycobacterium ulcerans Agy99	4550093
YP_907566.1	CDS	cpsA	NC_008611.1	4509084	4510559	D	membrane protein; function unknown but contains a cell envelope- related transcriptional attenuator domain. CpsA is a domain of unknown function that is found in the predicted extracellular domain of a number of putative membrane- bound proteins. may play a role in regulation of transcription.; membrane protein CpsA	4509084..4510559	Mycobacterium ulcerans Agy99	4550094
YP_907567.1	CDS	MUL_4041	NC_008611.1	4510566	4511357	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism; short-chain type dehydrogenase/reductase	complement(4510566..4511357)	Mycobacterium ulcerans Agy99	4550095
YP_907568.1	CDS	MUL_4042	NC_008611.1	4511361	4512194	R	cytoplasmic protein; function unknown, supposed to be involved in cellular metabolism.; short chain dehydrogenase	complement(4511361..4512194)	Mycobacterium ulcerans Agy99	4550096
YP_907569.1	CDS	MUL_4043	NC_008611.1	4512286	4512528	R	cytoplasmic protein; probable role in the biosynthesis of the product from U/S PKS gene, carrying its acyl intermediates.; acyl carrier protein	complement(4512286..4512528)	Mycobacterium ulcerans Agy99	4550097
YP_907570.1	CDS	MUL_4044	NC_008611.1	4512525	4514174	R	activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase	complement(4512525..4514174)	Mycobacterium ulcerans Agy99	4550098
YP_907571.1	CDS	bioF2	NC_008611.1	4514315	4515505	R	cytoplasmic protein; could be involved in biotin biosynthesis (at the first step) [catalytic activity: 6-carboxyhexanoyl-CoA + L- alanine = 8-amino-7-oxononanoate + CoA + CO2]; 8-amino-7-oxononanoate synthase	complement(4514315..4515505)	Mycobacterium ulcerans Agy99	4550099
YP_907572.1	CDS	MUL_4047	NC_008611.1	4516751	4517584	R	membrane protein; function unknown but domain identity suggests permease component of an uncharacterized ABC-type transport system.; hypothetical protein	complement(4516751..4517584)	Mycobacterium ulcerans Agy99	4550101
YP_907573.1	CDS	pstB	NC_008611.1	4517584	4518264	R	membrane protein; involved in active transport of inorganic phosphate across the membrane (import); responsible for energy coupling to the transport system. this is one of the proteins required for binding-protein-mediated phosphate transport. have ATP-binding ability and ATPase activity.; phosphate-transport ATP-binding protein ABC transporter PstB	complement(4517584..4518264)	Mycobacterium ulcerans Agy99	4550102
YP_907574.1	CDS	MUL_4050	NC_008611.1	4519950	4520252	D	cytoplasmic protein; members of the PadR-like family are transcriptional regulators that appear to be related to the pfam01047 family. this family includes PadR, a protein that is involved in negative regulation of phenolic acid metabolism.; hypothetical protein	4519950..4520252	Mycobacterium ulcerans Agy99	4550104
YP_907575.1	CDS	MUL_4051	NC_008611.1	4520320	4520484	D	cytoplasmic protein; hypothetical protein	4520320..4520484	Mycobacterium ulcerans Agy99	4550105
YP_907576.1	CDS	otsA	NC_008611.1	4520485	4521987	D	cytoplasmic protein; involved in osmoregulatory trehalose biosynthesis. mycobacteria can produce trehalose from glucose 6- phosphate and UDP-glucose (the OtsA-OtsB pathway) from glycogen-like alpha(1-->4)-linked glucose polymers (the TreY-TreZ pathway) and from maltose (the TreS pathway) [catalytic activity: trehalose 6-phosphate + H(2)O = trehalose + orthophosphate]; alpha, alpha-trehalose-phosphate synthase OtsA	4520485..4521987	Mycobacterium ulcerans Agy99	4550106
YP_907577.1	CDS	MUL_4055	NC_008611.1	4522702	4523202	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; MCE-associated protein	complement(4522702..4523202)	Mycobacterium ulcerans Agy99	4550108
YP_907578.1	CDS	MUL_4056	NC_008611.1	4523202	4523933	R	membrane protein; hypothetical protein	complement(4523202..4523933)	Mycobacterium ulcerans Agy99	4550109
YP_907579.1	CDS	mce4F	NC_008611.1	4523966	4525648	R	membrane protein; function unknown, but thought involved in host cell invasion.; MCE-family protein Mce4F	complement(4523966..4525648)	Mycobacterium ulcerans Agy99	4550110
YP_907580.1	CDS	lprN	NC_008611.1	4525660	4526811	R	secreted protein; function unknown, but thought to be involved in host cell invasion.; MCE family lipoprotein LprN	complement(4525660..4526811)	Mycobacterium ulcerans Agy99	4550111
YP_907581.1	CDS	mce4D	NC_008611.1	4526808	4528241	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce4D	complement(4526808..4528241)	Mycobacterium ulcerans Agy99	4550112
YP_907582.1	CDS	mce4C	NC_008611.1	4528238	4529299	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce4C	complement(4528238..4529299)	Mycobacterium ulcerans Agy99	4550113
YP_907583.1	CDS	mce4B	NC_008611.1	4529289	4530341	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce4B	complement(4529289..4530341)	Mycobacterium ulcerans Agy99	4550114
YP_907584.1	CDS	mce4A	NC_008611.1	4530341	4531543	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce4A	complement(4530341..4531543)	Mycobacterium ulcerans Agy99	4550115
YP_907585.1	CDS	yrbE4B	NC_008611.1	4531559	4532401	R	membrane protein; membrane protein YrbE4B	complement(4531559..4532401)	Mycobacterium ulcerans Agy99	4550116
YP_907586.1	CDS	yrbE4A	NC_008611.1	4532436	4533275	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; membrane protein YrbE4A	complement(4532436..4533275)	Mycobacterium ulcerans Agy99	4550117
YP_907587.1	CDS	fabG	NC_008611.1	4533437	4534330	R	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	complement(4533437..4534330)	Mycobacterium ulcerans Agy99	4552606
YP_907588.1	CDS	fdxD	NC_008611.1	4534430	4534678	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the secreted fraction by proteomics.; cytoplasmic protein; ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.; ferredoxin FdxD	complement(4534430..4534678)	Mycobacterium ulcerans Agy99	4552607
YP_907589.1	CDS	fadE26	NC_008611.1	4534843	4536021	D	Detected in the membrane fraction by proteomics.; membrane protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE26	4534843..4536021	Mycobacterium ulcerans Agy99	4552608
YP_907590.1	CDS	fadE27	NC_008611.1	4536052	4537149	D	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE27	4536052..4537149	Mycobacterium ulcerans Agy99	4552609
YP_907591.1	CDS	fadD17	NC_008611.1	4537212	4538723	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	4537212..4538723	Mycobacterium ulcerans Agy99	4552610
YP_907592.1	CDS	MUL_4071	NC_008611.1	4540131	4540856	D	function unknown but contains beta- lactamase/transpeptidase-like superfamily domain; hypothetical protein	4540131..4540856	Mycobacterium ulcerans Agy99	4552612
YP_907593.1	CDS	ilvX	NC_008611.1	4540853	4542400	R	thiamine-pyrophosphate requiring enzyme; hypothetical protein	complement(4540853..4542400)	Mycobacterium ulcerans Agy99	4552613
YP_907594.1	CDS	MUL_4074	NC_008611.1	4543296	4544063	R	cytoplasmic protein; fructosamine kinase-like protein	complement(4543296..4544063)	Mycobacterium ulcerans Agy99	4552615
YP_907595.1	CDS	fadD19_1	NC_008611.1	4544077	4545729	R	activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase	complement(4544077..4545729)	Mycobacterium ulcerans Agy99	4552616
YP_907596.1	CDS	echA19	NC_008611.1	4545764	4546618	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	4545764..4546618	Mycobacterium ulcerans Agy99	4552617
YP_907597.1	CDS	cyp142A3	NC_008611.1	4546636	4547847	R	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 142A3 Cyp142A3	complement(4546636..4547847)	Mycobacterium ulcerans Agy99	4552618
YP_907598.1	CDS	MUL_4078	NC_008611.1	4547871	4548581	D	cytoplasmic protein; hypothetical protein	4547871..4548581	Mycobacterium ulcerans Agy99	4552619
YP_907599.1	CDS	MUL_4079	NC_008611.1	4548642	4549679	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; coenzyme F420-dependent oxidoreductase	complement(4548642..4549679)	Mycobacterium ulcerans Agy99	4552620
YP_907600.1	CDS	MUL_4080	NC_008611.1	4549750	4550739	D	cytoplasmic protein; function unknown, contains a C-term predicted nucleic-acid-binding domain; hypothetical protein	4549750..4550739	Mycobacterium ulcerans Agy99	4552621
YP_907601.1	CDS	ltp4	NC_008611.1	4550755	4551816	D	cytoplasmic protein; function unknown, probably involved in lipid metabolism.; lipid-transfer protein	4550755..4551816	Mycobacterium ulcerans Agy99	4552622
YP_907602.1	CDS	ltp3	NC_008611.1	4551816	4552994	D	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	4551816..4552994	Mycobacterium ulcerans Agy99	4551358
YP_907603.1	CDS	MUL_4083	NC_008611.1	4553000	4553881	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	4553000..4553881	Mycobacterium ulcerans Agy99	4551359
YP_907604.1	CDS	MUL_4084	NC_008611.1	4553878	4554288	D	cytoplasmic protein; function unknown, this class of proteins is involved in enzymatic cleavage of a C-H bond adjacent to carbonyl or a carboxyl group, leading to an enol or a enolate intermediate that is subsequently re-protonated at the same or an adjacent carbon.; ketosteroid isomerase- like protein	4553878..4554288	Mycobacterium ulcerans Agy99	4551360
YP_907605.1	CDS	MUL_4088	NC_008611.1	4558214	4558738	R	cytoplasmic protein; function unknown, contains carbonic anhydrases/acetyltransferase superfamily domain; hypothetical protein	complement(4558214..4558738)	Mycobacterium ulcerans Agy99	4551363
YP_907606.1	CDS	MUL_4089	NC_008611.1	4558852	4560036	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	4558852..4560036	Mycobacterium ulcerans Agy99	4551364
YP_907607.1	CDS	MUL_4090	NC_008611.1	4560042	4560491	D	cytoplasmic protein; hypothetical protein	4560042..4560491	Mycobacterium ulcerans Agy99	4551365
YP_907608.1	CDS	MUL_4091	NC_008611.1	4560495	4561640	R	cytoplasmic protein; function unknown, contains P-loop containing nucleoside triphosphate hydrolase superfamily domain; hypothetical protein	complement(4560495..4561640)	Mycobacterium ulcerans Agy99	4551366
YP_907609.1	CDS	MUL_4092	NC_008611.1	4561640	4562380	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; short chain dehydrogenase	complement(4561640..4562380)	Mycobacterium ulcerans Agy99	4551367
YP_907610.1	CDS	MUL_4093	NC_008611.1	4562436	4563569	R	cytoplasmic protein; hypothetical protein	complement(4562436..4563569)	Mycobacterium ulcerans Agy99	4551368
YP_907611.1	CDS	gcs2	NC_008611.1	4563831	4566416	D	cytoplasmic protein; function unknown, this enzyme catalyses the first and rate limiting step in de novo glutathione biosynthesis.; glutamate--cysteine ligase, Gcs2	4563831..4566416	Mycobacterium ulcerans Agy99	4551369
YP_907612.1	CDS	MUL_4095	NC_008611.1	4566403	4567446	R	catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase	complement(4566403..4567446)	Mycobacterium ulcerans Agy99	4551370
YP_907613.1	CDS	mhpF_1	NC_008611.1	4567443	4568369	R	catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase	complement(4567443..4568369)	Mycobacterium ulcerans Agy99	4551371
YP_907614.1	CDS	MUL_4097	NC_008611.1	4568413	4569357	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; 2-keto-4-pentenoate hydratase	complement(4568413..4569357)	Mycobacterium ulcerans Agy99	4551372
YP_907615.2	CDS	MUL_4098	NC_008611.1	4569282	4570976	D	initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase	4569282..4570976	Mycobacterium ulcerans Agy99	4551373
YP_907616.1	CDS	MUL_4099	NC_008611.1	4570978	4571847	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; dehydratase	4570978..4571847	Mycobacterium ulcerans Agy99	4551374
YP_907617.1	CDS	MUL_4100	NC_008611.1	4572067	4572780	R	cytoplasmic protein; function unknown, contains restriction endonuclease- like superfamily domain; hypothetical protein	complement(4572067..4572780)	Mycobacterium ulcerans Agy99	4551375
YP_907618.1	CDS	ltp2_1	NC_008611.1	4572911	4574071	R	cytoplasmic protein; function unknown, supposed involvement in lipid metabolism.; lipid-transfer protein	complement(4572911..4574071)	Mycobacterium ulcerans Agy99	4551376
YP_907619.1	CDS	MUL_4102	NC_008611.1	4574071	4574457	R	cytoplasmic protein; function unknown, potential role in lipid metabolism. contains thioesterase/thiol ester dehydrase- isomerase superfamily domain.; hypothetical protein	complement(4574071..4574457)	Mycobacterium ulcerans Agy99	4552414
YP_907620.1	CDS	MUL_4103	NC_008611.1	4574469	4575419	R	cytoplasmic protein; function unknown, contains a predicted C-term nucleic-acid-binding protein; hypothetical protein	complement(4574469..4575419)	Mycobacterium ulcerans Agy99	4552415
YP_907621.1	CDS	fadE29	NC_008611.1	4575416	4576579	R	Detected in the cytoplasmic fraction by proteomics.; cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE29	complement(4575416..4576579)	Mycobacterium ulcerans Agy99	4552416
YP_907622.1	CDS	fadE28	NC_008611.1	4576564	4577595	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE28	complement(4576564..4577595)	Mycobacterium ulcerans Agy99	4552417
YP_907623.1	CDS	cyp125A7	NC_008611.1	4577613	4578866	R	cytoplasmic protein; cytochromes P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.; cytochrome P450 125A7 Cyp125A7	complement(4577613..4578866)	Mycobacterium ulcerans Agy99	4552418
YP_907624.1	CDS	fadA5	NC_008611.1	4579037	4580212	D	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	4579037..4580212	Mycobacterium ulcerans Agy99	4552419
YP_907625.1	CDS	MUL_4109	NC_008611.1	4580675	4581172	D	cytoplasmic protein; function unknown, contains a FMN-binding split barrel domain. possible role in the electron-transfer pathway. the FMN-binding split barrel is related to the ferredoxin reductase-like FAD-binding domain. flavodoxins are an example of a group of proteins with a tightly bound flavin mononucleotide (FMN) that mediate electron transfer at low redox potential.; hypothetical protein	4580675..4581172	Mycobacterium ulcerans Agy99	4552421
YP_907626.1	CDS	MUL_4110	NC_008611.1	4581193	4582098	R	cytoplasmic protein; function unknown, supposed involvement in cellular metabolism.; short chain dehydrogenase	complement(4581193..4582098)	Mycobacterium ulcerans Agy99	4552422
YP_907627.1	CDS	MUL_4111	NC_008611.1	4582119	4582898	R	cytoplasmic protein; function unknown, supposed involvement in cellular metabolism.; short chain dehydrogenase	complement(4582119..4582898)	Mycobacterium ulcerans Agy99	4552423
YP_907628.1	CDS	echA20	NC_008611.1	4585247	4585990	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	4585247..4585990	Mycobacterium ulcerans Agy99	4552425
YP_907629.1	CDS	MUL_4114	NC_008611.1	4585987	4586865	D	cytoplasmic protein; function unknown. possible subunit of a CoA- transferase, catalyzing the reversible of CoA from one carboxylic acid to another.; CoA-transferase subunit alpha	4585987..4586865	Mycobacterium ulcerans Agy99	4552426
YP_907630.1	CDS	MUL_4115	NC_008611.1	4586862	4587605	D	cytoplasmic protein; function unknown. possible subunit of a CoA- transferase, catalyzing the reversible of CoA from one carboxylic acid to another.; CoA-transferase subunit beta	4586862..4587605	Mycobacterium ulcerans Agy99	4552427
YP_907631.1	CDS	MUL_4116	NC_008611.1	4587602	4588669	D	cytoplasmic protein; function unknown, members of this family catalyse the denitrification of a number of nitroalkanes using either fad or FMN as a cofactor.; 2-nitropropane dioxygenase	4587602..4588669	Mycobacterium ulcerans Agy99	4552428
YP_907632.1	CDS	fdxB	NC_008611.1	4588700	4590721	D	membrane protein; function unknown, c-terminus probably involved in electron transfer in one or several metabolic reactions.; electron transfer protein FdxB	4588700..4590721	Mycobacterium ulcerans Agy99	4552429
YP_907633.1	CDS	fadA6_1	NC_008611.1	4592854	4594014	R	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	complement(4592854..4594014)	Mycobacterium ulcerans Agy99	4552431
YP_907634.1	CDS	MUL_4120	NC_008611.1	4594017	4594574	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(4594017..4594574)	Mycobacterium ulcerans Agy99	4552432
YP_907635.1	CDS	MUL_4122	NC_008611.1	4595302	4596348	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4595302..4596348)	Mycobacterium ulcerans Agy99	4552286
YP_907636.1	CDS	MUL_4124	NC_008611.1	4597857	4598645	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; short chain dehydrogenase	complement(4597857..4598645)	Mycobacterium ulcerans Agy99	4552288
YP_907637.1	CDS	fadE30	NC_008611.1	4598642	4599790	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE30	complement(4598642..4599790)	Mycobacterium ulcerans Agy99	4552289
YP_907638.1	CDS	fadD3	NC_008611.1	4599861	4601384	D	activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase	4599861..4601384	Mycobacterium ulcerans Agy99	4552290
YP_907639.1	CDS	fadE31	NC_008611.1	4601385	4602518	D	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE31	4601385..4602518	Mycobacterium ulcerans Agy99	4552291
YP_907640.1	CDS	fadE32	NC_008611.1	4602522	4603457	D	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE32	4602522..4603457	Mycobacterium ulcerans Agy99	4552292
YP_907641.1	CDS	fadE33	NC_008611.1	4603507	4604469	D	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE33	4603507..4604469	Mycobacterium ulcerans Agy99	4552293
YP_907642.1	CDS	aspB	NC_008611.1	4604466	4605641	D	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase	4604466..4605641	Mycobacterium ulcerans Agy99	4552294
YP_907643.1	CDS	nat	NC_008611.1	4605655	4606497	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; could have a role in acetylating, and hence inactivating, the antitubercular drug isoniazid [catalytic activity: acetyl-CoA + arylamine = CoA + N- acetylarylamine]; arylamine N-acetyltransferase Nat	complement(4605655..4606497)	Mycobacterium ulcerans Agy99	4552295
YP_907644.1	CDS	MUL_4132	NC_008611.1	4606650	4607261	D	cytoplasmic protein; function unknown.; hypothetical protein	4606650..4607261	Mycobacterium ulcerans Agy99	4552296
YP_907645.1	CDS	dsbF	NC_008611.1	4607561	4608136	D	Detected in the secreted fraction by proteomics.; secreted protein; function unknown, possibly involved in thiol:disulfide interchange.  contains PS00013 prokaryotic membrane lipoprotein lipid attachment site, N-term signal pepitde sequence and PS00194 thioredoxin family active site.; lipoprotein DsbF	4607561..4608136	Mycobacterium ulcerans Agy99	4552297
YP_907646.1	CDS	MUL_4135	NC_008611.1	4609014	4609946	R	membrane protein; function unknown, but domain identity suggests this protein may have metalloendopeptidase activity.; peptidase M48 like- protein	complement(4609014..4609946)	Mycobacterium ulcerans Agy99	4552299
YP_907647.1	CDS	MUL_4136	NC_008611.1	4609943	4610449	R	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	complement(4609943..4610449)	Mycobacterium ulcerans Agy99	4552300
YP_907648.1	CDS	MUL_4137	NC_008611.1	4610470	4610877	D	secreted protein; hypothetical protein	4610470..4610877	Mycobacterium ulcerans Agy99	4552301
YP_907649.1	CDS	MUL_4138	NC_008611.1	4610963	4611529	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidase	complement(4610963..4611529)	Mycobacterium ulcerans Agy99	4552302
YP_907650.1	CDS	bphC	NC_008611.1	4611541	4612443	R	cytoplasmic protein; involved in the degradation of biphenyl [catalytic activity: biphenyl-2,3-diol + O(2) = 2-hydroxy-6-oxo-6- phenylhexa-2,4-dienoate + H(2)O]; biphenyl-2,3-diol 1,2-dioxygenase	complement(4611541..4612443)	Mycobacterium ulcerans Agy99	4551843
YP_907651.1	CDS	bphD	NC_008611.1	4612440	4613327	R	cytoplasmic protein; involved in the degradation of biphenyl.; 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase BphD	complement(4612440..4613327)	Mycobacterium ulcerans Agy99	4551844
YP_907652.1	CDS	MUL_4141	NC_008611.1	4613327	4614511	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; acyl-CoA dehydrogenase	complement(4613327..4614511)	Mycobacterium ulcerans Agy99	4551845
YP_907653.1	CDS	hmp	NC_008611.1	4614705	4615781	D	cytoplasmic protein; may play a role in protection from oxidative (nitric oxide) and nitrosative stress. may also be involved in anaerobic metabolism. could have nitric oxide dioxygenase activity.; flavodoxin reductase Hmp	4614705..4615781	Mycobacterium ulcerans Agy99	4551846
YP_907654.1	CDS	MUL_4143	NC_008611.1	4615827	4616357	D	secreted protein; hypothetical protein	4615827..4616357	Mycobacterium ulcerans Agy99	4551847
YP_907655.1	CDS	fadE34	NC_008611.1	4616373	4618508	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE34	complement(4616373..4618508)	Mycobacterium ulcerans Agy99	4551848
YP_907656.1	CDS	MUL_4145	NC_008611.1	4618790	4619392	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	4618790..4619392	Mycobacterium ulcerans Agy99	4551849
YP_907657.1	CDS	MUL_4146	NC_008611.1	4619399	4620478	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; involved in transcriptional mechanism.; PurR family transcriptional regulator	complement(4619399..4620478)	Mycobacterium ulcerans Agy99	4551850
YP_907658.1	CDS	MUL_4147	NC_008611.1	4620574	4621479	D	membrane protein; function unknown, domain identity suggests periplasmic solute binding protein, containing an ATP- binding cassette transport system; hypothetical protein	4620574..4621479	Mycobacterium ulcerans Agy99	4551851
YP_907659.1	CDS	MUL_4148	NC_008611.1	4621488	4622306	D	membrane protein; function unknown, part of a binding-protein- dependent ABC transport system; ATPase component of an ABC-type transport system	4621488..4622306	Mycobacterium ulcerans Agy99	4551852
YP_907660.1	CDS	MUL_4149	NC_008611.1	4622303	4623154	D	membrane protein; part of an ABC transport system; permease of an ABC-type transporter	4622303..4623154	Mycobacterium ulcerans Agy99	4551853
YP_907661.1	CDS	lppH	NC_008611.1	4623241	4623957	D	secreted protein; lipoprotein LppH	4623241..4623957	Mycobacterium ulcerans Agy99	4551854
YP_907662.1	CDS	MUL_4151	NC_008611.1	4623972	4624721	D	membrane protein; lipoprotein	4623972..4624721	Mycobacterium ulcerans Agy99	4551855
YP_907663.1	CDS	lamB	NC_008611.1	4624740	4625498	D	cytoplasmic protein; function unknown, the lam locus of aspergillus nidulans consists of two divergently transcribed genes, lama and Lamb, involved in the utilization of lactams such as 2-pyrrolidinone. both genes are under the control of the positive regulatory gene AmdR and are subject to carbon and nitrogen metabolite repression. the exact molecular function of the proteins in this family is unknown.; LamB/YcsF family protein	4624740..4625498	Mycobacterium ulcerans Agy99	4551856
YP_907664.1	CDS	MUL_4153	NC_008611.1	4625498	4626418	D	cytoplasmic protein; hypothetical protein	4625498..4626418	Mycobacterium ulcerans Agy99	4551857
YP_907665.1	CDS	arsB2	NC_008611.1	4626441	4627682	D	membrane protein; thought to be involved in transport of arsenic across the membrane (export): arsenic resistance by an export mechanism. form the channel of an arsenite pump responsible for the translocation of the substrate across the membrane.; arsenical pump integral membrane protein ArsB2	4626441..4627682	Mycobacterium ulcerans Agy99	4551858
YP_907666.1	CDS	MUL_4155	NC_008611.1	4627705	4628637	R	Detected in the membrane fraction by proteomics.; cytoplasmic protein; function unknown role in tRNA and rRNA base modification by methylation.; tRNA/rRNA methyltransferase	complement(4627705..4628637)	Mycobacterium ulcerans Agy99	4551859
YP_907667.1	CDS	cysS	NC_008611.1	4628638	4630044	R	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase	complement(4628638..4630044)	Mycobacterium ulcerans Agy99	4551860
YP_907668.1	CDS	ispF	NC_008611.1	4630102	4630581	R	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	complement(4630102..4630581)	Mycobacterium ulcerans Agy99	4551861
YP_907669.1	CDS	ispD	NC_008611.1	4630596	4631279	R	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	complement(4630596..4631279)	Mycobacterium ulcerans Agy99	4551582
YP_907670.1	CDS	MUL_4159	NC_008611.1	4631296	4631784	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown role in regulation; transcriptional regulatory protein	complement(4631296..4631784)	Mycobacterium ulcerans Agy99	4551583
YP_907671.1	CDS	lpqE	NC_008611.1	4632227	4632784	D	membrane protein; lipoprotein LpqE	4632227..4632784	Mycobacterium ulcerans Agy99	4551584
YP_907672.1	CDS	MUL_4162	NC_008611.1	4634325	4635401	D	non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA	4634325..4635401	Mycobacterium ulcerans Agy99	4551586
YP_907673.1	CDS	MUL_4163	NC_008611.1	4635413	4636234	R	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the secreted protein fraction; membrane protein; hypothetical protein	complement(4635413..4636234)	Mycobacterium ulcerans Agy99	4551587
YP_907674.1	CDS	MUL_4164	NC_008611.1	4636324	4636941	R	cytoplasmic protein; catalyzes the reversible hydratation of carbon dioxide [catalytic activity: H(2)CO(3) = CO(2) + H(2)O]; carbonic anhydrase	complement(4636324..4636941)	Mycobacterium ulcerans Agy99	4551588
YP_907675.1	CDS	mutY	NC_008611.1	4636940	4637851	D	cytoplasmic protein; involved in base excision repair. removes adenine mispaired with 8-OXOG. may repair a.G and a.C mismatches by adenine excision.; adenine glycosylase MutY	4636940..4637851	Mycobacterium ulcerans Agy99	4551589
YP_907676.1	CDS	MUL_4166	NC_008611.1	4637859	4638626	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hydrolase	complement(4637859..4638626)	Mycobacterium ulcerans Agy99	4551590
YP_907677.1	CDS	lpqF	NC_008611.1	4639031	4640344	D	membrane protein; lipoprotein LpqF	4639031..4640344	Mycobacterium ulcerans Agy99	4551592
YP_907678.1	CDS	ppm1_2	NC_008611.1	4640202	4641164	R	cytoplasmic protein; transfers mannose from GDP-mannose to all endogenous polyprenol-phosphates.; polyprenol-monophosphomannose synthase Ppm1_2	complement(4640202..4641164)	Mycobacterium ulcerans Agy99	4551593
YP_907679.1	CDS	MUL_4170	NC_008611.1	4641161	4642729	R	membrane protein; thought to be involved in a transport system across the membrane (perhaps drug transport): responsible for the translocation of the substrate across the membrane.; integral membrane transport protein	complement(4641161..4642729)	Mycobacterium ulcerans Agy99	4551594
YP_907680.1	CDS	gpmB	NC_008611.1	4644060	4644593	R	cytoplasmic protein; may be involved in the catalysis of both the synthesis and the degradation of fructose-2,6- bisphosphate. beta-D-fructose 2,6-bisphosphate + H(2)O <=> D-fructose 6-phosphate +  phosphate.; fructose-2,6-bisphosphatase GpmB	complement(4644060..4644593)	Mycobacterium ulcerans Agy99	4551596
YP_907681.1	CDS	MUL_4173	NC_008611.1	4644601	4645368	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(4644601..4645368)	Mycobacterium ulcerans Agy99	4551597
YP_907682.1	CDS	MUL_4174	NC_008611.1	4645383	4645598	R	membrane protein; hypothetical protein	complement(4645383..4645598)	Mycobacterium ulcerans Agy99	4551598
YP_907683.1	CDS	MUL_4176	NC_008611.1	4646777	4647823	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4646777..4647823)	Mycobacterium ulcerans Agy99	4549741
YP_907684.1	CDS	clpC1	NC_008611.1	4648646	4651195	R	Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; hydrolyses proteins in presence of ATP. may interact with a ClpP-like protease involved in degradation of denatured proteins.; ATP-dependent protease ATP-binding subunit ClpC1	complement(4648646..4651195)	Mycobacterium ulcerans Agy99	4549743
YP_907685.1	CDS	MUL_4179	NC_008611.1	4651370	4652416	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4651370..4652416)	Mycobacterium ulcerans Agy99	4549744
YP_907686.1	CDS	lsr2	NC_008611.1	4652949	4653290	R	Detected in the cytoplasmic and the extracellular matrix fractions by proteomics.; extracellular matrix protein; dominant T-cell antigen and may stimulate lymphocyte proliferation.; iron-regulated Lsr2 protein	complement(4652949..4653290)	Mycobacterium ulcerans Agy99	4549745
YP_907687.1	CDS	lysS	NC_008611.1	4653405	4654901	R	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase	complement(4653405..4654901)	Mycobacterium ulcerans Agy99	4549746
YP_907688.1	CDS	MUL_4182	NC_008611.1	4655023	4655841	R	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase	complement(4655023..4655841)	Mycobacterium ulcerans Agy99	4549747
YP_907689.1	CDS	panD	NC_008611.1	4655844	4656263	R	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase	complement(4655844..4656263)	Mycobacterium ulcerans Agy99	4549748
YP_907690.1	CDS	panC	NC_008611.1	4656275	4657222	R	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase	complement(4656275..4657222)	Mycobacterium ulcerans Agy99	4549749
YP_907691.1	CDS	MUL_4185	NC_008611.1	4657219	4658130	R	function unknown contains NAD(P)-binding Rossmann- fold superfamily domains; hypothetical protein	complement(4657219..4658130)	Mycobacterium ulcerans Agy99	4549750
YP_907692.1	CDS	MUL_4186	NC_008611.1	4658233	4659585	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein rich in alanine, arginine and proline	complement(4658233..4659585)	Mycobacterium ulcerans Agy99	4549751
YP_907693.1	CDS	MUL_4187	NC_008611.1	4659697	4660173	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(4659697..4660173)	Mycobacterium ulcerans Agy99	4549752
YP_907694.1	CDS	folK	NC_008611.1	4660173	4660700	R	cytoplasmic protein; involved in dihydrofolate biosynthesis (at the first step) [catalytic activity: ATP + 2-amino-4-hydroxy-6- hydroxymethyl-7,8-dihydropteridine = AMP + 2-amino-7,8- dihydro-4-hydroxy-6-(diphosphooxymethyl)pteri di ne]; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	complement(4660173..4660700)	Mycobacterium ulcerans Agy99	4549753
YP_907695.1	CDS	folB	NC_008611.1	4660697	4661098	R	cytoplasmic protein; involved in folate biosynthesis. catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8- dihydropterin (by similarity) [catalytic activity: 2-amino- 4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7, 8- dihydropteridine = 2-amino-4-hydroxy-6-hydroxymethyl-7,8- dihydropteridine + glycolaldehyde]; dihydroneopterin aldolase FolB	complement(4660697..4661098)	Mycobacterium ulcerans Agy99	4549754
YP_907696.1	CDS	folP1	NC_008611.1	4661091	4661909	R	cytoplasmic protein; involved in dihydrofolate biosynthesis (at the second step) catalyzes the formation of the immediate precursor of folic acid. it is implicated in resistance to sulfonamide [catalytic activity: 2-amino-4-hydroxy-6- hydroxymethyl-7,8-dihydropteridine diphosphate + 4- aminobenzoate = pyrophosphate + dihydropteroate]; dihydropteroate synthase 1 FolP1	complement(4661091..4661909)	Mycobacterium ulcerans Agy99	4549755
YP_907697.1	CDS	folE	NC_008611.1	4661930	4662538	R	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I	complement(4661930..4662538)	Mycobacterium ulcerans Agy99	4549756
YP_907698.1	CDS	ftsH	NC_008611.1	4662555	4664777	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); membrane protein; thought to act as an ATP-dependent zinc metallopeptidase, with ATPase and proteolytic activities. probably has a regulatory role in stress response and specific proteins secretion for adaptation to host environment.; membrane-bound protease FtsH	complement(4662555..4664777)	Mycobacterium ulcerans Agy99	4549757
YP_907699.1	CDS	ephA	NC_008611.1	4665017	4665985	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; biotransformation enzyme that catalyzes the hydrolysis of epoxides (alkene oxides, oxiranes) and Arene oxides to less reactive and more water soluble dihydrodiols by the trans addition of water. thought to be involved in detoxification reactions following oxidative damage to lipids [catalytic activity: an epoxide + H(2)O = a glycol]; epoxide hydrolase EphA	4665017..4665985	Mycobacterium ulcerans Agy99	4550909
YP_907700.1	CDS	MUL_4194	NC_008611.1	4665979	4667661	D	potential pseudogene as C-term extension caused by removal of stop codon and additional 170 aa added.; cytoplasmic protein; monooxygenase	4665979..4667661	Mycobacterium ulcerans Agy99	4550910
YP_907701.1	CDS	MUL_4195	NC_008611.1	4667212	4668468	R	PPE65; membrane protein; PPE family protein	complement(4667212..4668468)	Mycobacterium ulcerans Agy99	4550911
YP_907702.1	CDS	MUL_4196	NC_008611.1	4668481	4668780	R	PE32; membrane protein; PE family protein	complement(4668481..4668780)	Mycobacterium ulcerans Agy99	4550912
YP_907703.1	CDS	MUL_4197	NC_008611.1	4669091	4670137	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	4669091..4670137	Mycobacterium ulcerans Agy99	4550913
YP_907704.1	CDS	lpqG	NC_008611.1	4670831	4671577	D	membrane protein; lipoprotein LpqG	4670831..4671577	Mycobacterium ulcerans Agy99	4550914
YP_907705.1	CDS	hpt	NC_008611.1	4671603	4672211	R	cytoplasmic protein; involved in purine salvage [catalytic activity: imp + pyrophosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate (guanine can replace hypoxanthine to produce GMP)]; hypoxanthine-guanine phosphoribosyltransferase Hpt	complement(4671603..4672211)	Mycobacterium ulcerans Agy99	4550915
YP_907706.1	CDS	mesJ	NC_008611.1	4672265	4673236	R	cytoplasmic protein; predicted ATPase of the PP-loop superfamily implicated in cell cycle control; cell cycle protein MesJ	complement(4672265..4673236)	Mycobacterium ulcerans Agy99	4550916
YP_907707.1	CDS	MUL_4202	NC_008611.1	4673215	4674273	R	cytoplasmic protein; hypothetical protein	complement(4673215..4674273)	Mycobacterium ulcerans Agy99	4550917
YP_907708.1	CDS	dacB1	NC_008611.1	4674270	4675655	R	membrane protein; involved in peptidoglycan synthesis (at final stages) hydrolyzes the bound D-alanyl-D-alanine [catalytic activity: D-alanyl-D-alanine + H(2)O = 2 D- alanine]; D-alanyl-D-alanine carboxypeptidase	complement(4674270..4675655)	Mycobacterium ulcerans Agy99	4550918
YP_907709.1	CDS	ppa	NC_008611.1	4675796	4676284	D	Also detected in the extracellular matrix by proteomics.; cytoplasmic protein; involved in the function of cellular bioenergetics [catalytic activity: pyrophosphate + H(2)O = 2 orthophosphate]; inorganic pyrophosphatase Ppa	4675796..4676284	Mycobacterium ulcerans Agy99	4550919
YP_907710.1	CDS	MUL_4205	NC_008611.1	4676293	4677369	R	membrane protein; hypothetical protein	complement(4676293..4677369)	Mycobacterium ulcerans Agy99	4550920
YP_907711.1	CDS	MUL_4206	NC_008611.1	4677492	4678826	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(4677492..4678826)	Mycobacterium ulcerans Agy99	4550921
YP_907712.1	CDS	MUL_4207	NC_008611.1	4679046	4680254	D	membrane protein; hypothetical protein	4679046..4680254	Mycobacterium ulcerans Agy99	4550922
YP_907713.1	CDS	MUL_4208	NC_008611.1	4680290	4681003	D	cytoplasmic protein; function unknown, the domain detected in this CDS is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; glycosyl transferase family protein	4680290..4681003	Mycobacterium ulcerans Agy99	4550923
YP_907714.1	CDS	MUL_4209	NC_008611.1	4681000	4681341	D	membrane protein; hypothetical protein	4681000..4681341	Mycobacterium ulcerans Agy99	4550924
YP_907715.1	CDS	galE1	NC_008611.1	4681357	4682301	R	cytoplasmic protein; involved in galactofuranosyl biosynthesis: converts UDO-GlcP to UDP-GalP [catalytic activity: UDP- glucopyranose = UDP-galactopyranose]; UDP-glucose 4-epimerase GalE1	complement(4681357..4682301)	Mycobacterium ulcerans Agy99	4550925
YP_907716.1	CDS	MUL_4211	NC_008611.1	4682334	4684118	D	membrane protein; hypothetical protein	4682334..4684118	Mycobacterium ulcerans Agy99	4550926
YP_907717.1	CDS	MUL_4213	NC_008611.1	4686563	4687474	R	cytoplasmic protein; hydrolase	complement(4686563..4687474)	Mycobacterium ulcerans Agy99	4551224
YP_907718.1	CDS	MUL_4214	NC_008611.1	4687699	4689033	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	4687699..4689033	Mycobacterium ulcerans Agy99	4551225
YP_907719.1	CDS	MUL_4216	NC_008611.1	4689608	4689850	R	cytoplasmic protein; hypothetical protein	complement(4689608..4689850)	Mycobacterium ulcerans Agy99	4551227
YP_907720.1	CDS	MUL_4217	NC_008611.1	4690163	4690417	R	cytoplasmic protein; hypothetical protein	complement(4690163..4690417)	Mycobacterium ulcerans Agy99	4551228
YP_907721.1	CDS	MUL_4218	NC_008611.1	4690573	4690728	D	cytoplasmic protein; hypothetical protein	4690573..4690728	Mycobacterium ulcerans Agy99	4551229
YP_907722.1	CDS	MUL_4220	NC_008611.1	4690966	4692171	R	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta'	complement(4690966..4692171)	Mycobacterium ulcerans Agy99	4551231
YP_907723.1	CDS	MUL_4221	NC_008611.1	4692327	4693916	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; C-term contains an adenylyl/guanylyl cyclase domain. may catalyze the formation of cyclic AMP/GMP from ATP/GTP.; adenylate cyclase	4692327..4693916	Mycobacterium ulcerans Agy99	4551232
YP_907724.1	CDS	topA	NC_008611.1	4693927	4696731	R	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I	complement(4693927..4696731)	Mycobacterium ulcerans Agy99	4551233
YP_907725.1	CDS	MUL_4223	NC_008611.1	4696935	4697513	R	cytoplasmic protein; hypothetical protein	complement(4696935..4697513)	Mycobacterium ulcerans Agy99	4551234
YP_907726.1	CDS	cspA_1	NC_008611.1	4697658	4697861	R	Detected in the cytoplamic and the secreted fractions by proteomics.; cytoplasmic protein; possibly involved in cold acclimatization processes (the production of the protein is supposed predominantly induced at low temperatures); cold-shock protein	complement(4697658..4697861)	Mycobacterium ulcerans Agy99	4551235
YP_907727.1	CDS	MUL_4226	NC_008611.1	4700882	4701913	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	4700882..4701913	Mycobacterium ulcerans Agy99	4551237
YP_907728.1	CDS	MUL_4228	NC_008611.1	4702275	4702541	R	cytoplasmic protein; hypothetical protein	complement(4702275..4702541)	Mycobacterium ulcerans Agy99	4551147
YP_907729.1	CDS	MUL_4229	NC_008611.1	4702598	4702798	R	membrane protein; hypothetical protein	complement(4702598..4702798)	Mycobacterium ulcerans Agy99	4551148
YP_907730.1	CDS	MUL_4230	NC_008611.1	4702823	4703425	R	membrane protein; hypothetical protein	complement(4702823..4703425)	Mycobacterium ulcerans Agy99	4551149
YP_907731.1	CDS	MUL_4231	NC_008611.1	4703459	4704253	R	membrane protein; function unknown, contains domain identity to Flp pilus assembly protein TadB; hypothetical protein	complement(4703459..4704253)	Mycobacterium ulcerans Agy99	4551150
YP_907732.1	CDS	MUL_4232	NC_008611.1	4704250	4705419	R	cytoplasmic protein; function unknown, contains domain identity with Flp pilus assembly protein, ATPase CpaF; hypothetical protein	complement(4704250..4705419)	Mycobacterium ulcerans Agy99	4551151
YP_907733.1	CDS	MUL_4233	NC_008611.1	4705530	4706525	R	cytoplasmic protein; function unknown, has a P-loop containing nucleoside triphosphate hydrolase superfamily domain.; hypothetical protein	complement(4705530..4706525)	Mycobacterium ulcerans Agy99	4551152
YP_907734.1	CDS	serB	NC_008611.1	4707003	4707860	D	membrane protein; phosphoserine + H(2)O <=> serine + phosphate; phosphoserine phosphatase SerB	4707003..4707860	Mycobacterium ulcerans Agy99	4551153
YP_907735.1	CDS	MUL_4235	NC_008611.1	4707986	4708300	R	cytoplasmic protein; hypothetical protein	complement(4707986..4708300)	Mycobacterium ulcerans Agy99	4551154
YP_907736.1	CDS	MUL_4236	NC_008611.1	4708353	4709123	R	cytoplasmic protein; hypothetical protein	complement(4708353..4709123)	Mycobacterium ulcerans Agy99	4551155
YP_907737.1	CDS	dppD	NC_008611.1	4709135	4710790	R	membrane protein; involved in active transport of dipeptides across the membrane (import) responsible for energy coupling to the transport system.; dipeptide-transport ATP-binding protein ABC transporter DppD	complement(4709135..4710790)	Mycobacterium ulcerans Agy99	4551156
YP_907738.1	CDS	dppC	NC_008611.1	4710787	4711650	R	membrane protein; involved in active transport of dipeptide across the membrane (import) responsible for the translocation of the substrate across the membrane.; dipeptide-transport integral membrane protein ABC transporter DppC	complement(4710787..4711650)	Mycobacterium ulcerans Agy99	4551157
YP_907739.1	CDS	dppB	NC_008611.1	4711643	4712569	R	membrane protein; involved in active transport of dipeptide across the membrane (import) responsible for the translocation of the substrate across the membrane.; dipeptide-transport integral membrane protein ABC transporter DppB	complement(4711643..4712569)	Mycobacterium ulcerans Agy99	4551158
YP_907740.1	CDS	dppA	NC_008611.1	4712571	4714328	R	membrane protein; thought to be involved in active transport of dipeptide across the membrane (import); periplasmic dipeptide-binding lipoprotein DppA	complement(4712571..4714328)	Mycobacterium ulcerans Agy99	4551159
YP_907741.1	CDS	acs	NC_008611.1	4714374	4716356	D	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase	4714374..4716356	Mycobacterium ulcerans Agy99	4551160
YP_907742.1	CDS	MUL_4242	NC_008611.1	4716365	4717063	R	membrane protein; function unknown, domain identity suggests peptidase, trypsin-like serine or cysteine protease. contains peptidase S1B, active site.; hypothetical protein	complement(4716365..4717063)	Mycobacterium ulcerans Agy99	4551161
YP_907743.1	CDS	MUL_4243	NC_008611.1	4717289	4717807	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	4717289..4717807	Mycobacterium ulcerans Agy99	4551162
YP_907744.1	CDS	ephE	NC_008611.1	4717808	4718773	D	thought to be involved in detoxification reactions following oxidative damage to lipids. biotransformation enzyme that catalyzes the hydrolysis of epoxides: aromatic hydrocarbons catabolism [catalytic activity: an epoxide + H(2)O = a glycol]; epoxide hydrolase EphE	4717808..4718773	Mycobacterium ulcerans Agy99	4551163
YP_907745.1	CDS	MUL_4245	NC_008611.1	4718766	4719968	R	membrane protein; function unknown, hydrolyses of peptides and/or proteins (possibly cleaved preferentially after serine residue) contains peptidase S1B, active site; membrane-associated serine protease	complement(4718766..4719968)	Mycobacterium ulcerans Agy99	4551164
YP_907746.1	CDS	MUL_4247	NC_008611.1	4720778	4721383	R	membrane protein; function unknown, contains a N-term thioredoxin domain. may serve as a general protein disulphide oxidoreductase.; membrane-anchored thioredoxin-like protein	complement(4720778..4721383)	Mycobacterium ulcerans Agy99	4551238
YP_907747.1	CDS	nth	NC_008611.1	4721442	4722143	R	cytoplasmic protein; has both an apurinic and/or apyrimidinic endonuclease activity and a DNA N-glycosylase activity. incises damaged DNA at cytosines, thymines and guanines. acts on a damaged strand (oxidized pyrimidines), 5' from the damaged site [catalytic activity: endonucleolytic cleavage near apurinic or apyrimidinic sites to products with 5'-phosphate]; endonuclease III Nth	complement(4721442..4722143)	Mycobacterium ulcerans Agy99	4551239
YP_907748.1	CDS	MUL_4249	NC_008611.1	4722311	4722664	D	membrane protein; hypothetical protein	4722311..4722664	Mycobacterium ulcerans Agy99	4551240
YP_907749.1	CDS	MUL_4250	NC_008611.1	4722763	4723437	D	Detected in the cytoplasmic and membrane fractions by proteomics.; cytoplasmic protein; involved in transcriptional mechanism.; regulatory protein	4722763..4723437	Mycobacterium ulcerans Agy99	4551241
YP_907750.1	CDS	MUL_4251	NC_008611.1	4723434	4724240	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hypothetical protein	complement(4723434..4724240)	Mycobacterium ulcerans Agy99	4551242
YP_907751.1	CDS	MUL_4252	NC_008611.1	4724246	4724701	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, this endoribonuclease domain is active on single-stranded mRNA and inhibits protein synthesis by cleavage of mRNA.; hypothetical protein	complement(4724246..4724701)	Mycobacterium ulcerans Agy99	4551243
YP_907752.1	CDS	MUL_4253	NC_008611.1	4724723	4724884	R	hypothetical protein	complement(4724723..4724884)	Mycobacterium ulcerans Agy99	4551244
YP_907753.1	CDS	MUL_4254	NC_008611.1	4724961	4725983	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; function unknown, may catalyze the extrusion of undeterminated anions [catalytic activity: ATP + H(2)O + undeterminated anion(in) = ADP + phosphate + undeterminated anion(out)]; anion transporter ATPase	4724961..4725983	Mycobacterium ulcerans Agy99	4551245
YP_907754.1	CDS	MUL_4255	NC_008611.1	4725980	4727140	D	membrane protein; anion-transporting ATPase; supposed catalyzes the extrusion of undeterminated anions [catalytic activity: ATP + H(2)O + undeterminated anion(in) = ADP + phosphate + undeterminated anion(out)]; anion transporter ATPase	4725980..4727140	Mycobacterium ulcerans Agy99	4551246
YP_907755.1	CDS	whiB4	NC_008611.1	4727288	4727470	R	potential pseudogene as N-term truncated due to mutation of original start codon; cytoplasmic protein; involved in a transcriptional mechanism.; transcriptional regulatory protein Whib-like WhiB4	complement(4727288..4727470)	Mycobacterium ulcerans Agy99	4551247
YP_907756.1	CDS	ponA2	NC_008611.1	4727999	4730410	D	membrane protein; involved in peptidoglycan synthesis (at the final stages), cell wall formation. synthesis of cross-linked peptidoglycan from the lipid intermediates. the enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits); bifunctional membrane-associated penicillin- binding protein 1A/1B PonA2	4727999..4730410	Mycobacterium ulcerans Agy99	4551248
YP_907757.1	CDS	MUL_4258	NC_008611.1	4730488	4731501	D	Detected in the cytoplasmic and membrane fractions by proteomics; membrane protein; function unknown, contains metallophosphoesterase domain; hypothetical protein	4730488..4731501	Mycobacterium ulcerans Agy99	4551249
YP_907758.1	CDS	cysK	NC_008611.1	4731498	4732604	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, probably involved in cellular metabolism. reaction catalysed: O(3)-acetyl-L-serine + H(2)S <=> L-cysteine + acetate.; cysteine synthase	4731498..4732604	Mycobacterium ulcerans Agy99	4551250
YP_907759.1	CDS	MUL_4261	NC_008611.1	4732775	4733026	R	cytoplasmic protein; hypothetical protein	complement(4732775..4733026)	Mycobacterium ulcerans Agy99	4551252
YP_907760.1	CDS	MUL_4263	NC_008611.1	4734598	4734840	R	cytoplasmic protein; hypothetical protein	complement(4734598..4734840)	Mycobacterium ulcerans Agy99	4551254
YP_907761.1	CDS	MUL_4264	NC_008611.1	4734932	4735192	R	membrane protein; hypothetical protein	complement(4734932..4735192)	Mycobacterium ulcerans Agy99	4551255
YP_907762.1	CDS	nrfD	NC_008611.1	4740967	4741938	D	membrane protein; NrfD is an integral transmembrane protein with loops in both the periplasm and the cytoplasm. NrfD is thought to participate in the transfer of electrons, from the quinone pool into the terminal components of the Nrf pathway.; formate-dependent nitrite reductase, membrane component, NrfD	4740967..4741938	Mycobacterium ulcerans Agy99	4551115
YP_907763.1	CDS	MUL_4271	NC_008611.1	4741949	4742368	R	cytoplasmic protein; function unknown, contains GatB/Yqey domain. this domain is found at the C terminus of GatB which transamidates glu-tRNA to Gln-tRNA.; hypothetical protein	complement(4741949..4742368)	Mycobacterium ulcerans Agy99	4551116
YP_907764.1	CDS	MUL_4272	NC_008611.1	4742531	4743790	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	4742531..4743790	Mycobacterium ulcerans Agy99	4551117
YP_907765.1	CDS	MUL_4273	NC_008611.1	4743811	4744461	D	cytoplasmic protein; hypothetical protein	4743811..4744461	Mycobacterium ulcerans Agy99	4551118
YP_907766.1	CDS	MUL_4274	NC_008611.1	4744461	4745600	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	4744461..4745600	Mycobacterium ulcerans Agy99	4551119
YP_907767.1	CDS	moxR2	NC_008611.1	4745597	4746574	D	Detected in the cytoplasmic fraction by LC-MS/MS. Also detected in the extracellular matrix and membrane fraction by proteomics.; cytoplasmic protein; involved in transcriptional mechanism; regulates methanol dehydrogenase.; methanol dehydrogenase transcriptional regulatory protein MoxR2	4745597..4746574	Mycobacterium ulcerans Agy99	4551120
YP_907768.1	CDS	MUL_4276	NC_008611.1	4746574	4747896	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; function unknown, contains N-term signal peptide; hypothetical protein	4746574..4747896	Mycobacterium ulcerans Agy99	4551121
YP_907769.1	CDS	MUL_4277	NC_008611.1	4747901	4748893	R	membrane protein; hypothetical protein	complement(4747901..4748893)	Mycobacterium ulcerans Agy99	4551122
YP_907770.1	CDS	MUL_4278	NC_008611.1	4748998	4749903	D	membrane protein; function unknown, contains RDD domain RDD family. the molecular function of this region is unknown. however this region may be involved in transport of an as yet unknown set of ligands.; hypothetical protein	4748998..4749903	Mycobacterium ulcerans Agy99	4551123
YP_907771.1	CDS	MUL_4279	NC_008611.1	4749974	4750741	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; PadR-like transcriptional regulatory protein	4749974..4750741	Mycobacterium ulcerans Agy99	4551124
YP_907772.1	CDS	MUL_4280	NC_008611.1	4750900	4753086	D	PE_PGRS9_2; membrane protein; PE-PGRS family protein	4750900..4753086	Mycobacterium ulcerans Agy99	4551125
YP_907773.1	CDS	glpK	NC_008611.1	4753083	4754609	R	Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase	complement(4753083..4754609)	Mycobacterium ulcerans Agy99	4551126
YP_907774.1	CDS	csdB	NC_008611.1	4756949	4758100	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; probable role in the metabolism of proteins containing the rare amino acid selenocysteine; selenocysteine lyase, CsdB	complement(4756949..4758100)	Mycobacterium ulcerans Agy99	4551094
YP_907775.1	CDS	MUL_4285	NC_008611.1	4758097	4759062	R	cytoplasmic protein; S-adenosyl-L-methionine- dependentmethyltransferase	complement(4758097..4759062)	Mycobacterium ulcerans Agy99	4551095
YP_907776.1	CDS	MUL_4286	NC_008611.1	4759059	4759772	R	cytoplasmic protein; function unknown, contains N-terminal nucleophile aminohydrolase superfamily domain; hypothetical protein	complement(4759059..4759772)	Mycobacterium ulcerans Agy99	4551096
YP_907777.1	CDS	MUL_4287	NC_008611.1	4759772	4761073	R	cytoplasmic protein; hypothetical protein	complement(4759772..4761073)	Mycobacterium ulcerans Agy99	4551097
YP_907778.1	CDS	MUL_4290	NC_008611.1	4762505	4763203	R	secreted protein; hypothetical protein	complement(4762505..4763203)	Mycobacterium ulcerans Agy99	4551099
YP_907779.1	CDS	katE	NC_008611.1	4763200	4764648	R	Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; protects against oxidative stress. converts hydrogen peroxide to water and molecular oxygen.; catalase KatE	complement(4763200..4764648)	Mycobacterium ulcerans Agy99	4551100
YP_907780.1	CDS	MUL_4292	NC_008611.1	4764793	4765167	R	cytoplasmic protein; function unknown, rich in short repeat motifs.; hypothetical protein	complement(4764793..4765167)	Mycobacterium ulcerans Agy99	4551101
YP_907781.1	CDS	MUL_4293	NC_008611.1	4765358	4765705	R	cytoplasmic protein; function unknown, rich in short repeat motifs.; hypothetical protein	complement(4765358..4765705)	Mycobacterium ulcerans Agy99	4551102
YP_907782.1	CDS	MUL_4295	NC_008611.1	4766922	4768058	R	secreted protein; hypothetical protein	complement(4766922..4768058)	Mycobacterium ulcerans Agy99	4551104
YP_907783.1	CDS	asd	NC_008611.1	4768066	4769124	R	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase	complement(4768066..4769124)	Mycobacterium ulcerans Agy99	4551105
YP_907784.1	CDS	ask	NC_008611.1	4769126	4770391	R	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase	complement(4769126..4770391)	Mycobacterium ulcerans Agy99	4551106
YP_907785.1	CDS	MUL_4299	NC_008611.1	4774356	4776248	R	cytoplasmic protein; hypothetical protein	complement(4774356..4776248)	Mycobacterium ulcerans Agy99	4551108
YP_907786.1	CDS	leuA	NC_008611.1	4776991	4778691	D	cytoplasmic protein; involved in leucine biosynthesis (at the first step) catalyzes condensation of acetyl-CoA and 2- oxoisovalerate to form 2-isopropylmalate synthase [catalytic activity: 3-carboxy-3-hydroxy-4- methylpentanoate + CoA = acetyl-CoA + 3-methyl-2- oxobutanoate + H(2)O]; 2-isopropylmalate synthase	4776991..4778691	Mycobacterium ulcerans Agy99	4551109
YP_907787.1	CDS	MUL_4301	NC_008611.1	4778688	4779251	R	cytoplasmic protein; involved in transcriptional mechanism.; DeoR family transcriptional regulator	complement(4778688..4779251)	Mycobacterium ulcerans Agy99	4551304
YP_907788.1	CDS	MUL_4302	NC_008611.1	4779251	4779616	R	membrane protein; function unknown, contains multidrug efflux transporter AcrB transmembrane superfamily domain; hypothetical protein	complement(4779251..4779616)	Mycobacterium ulcerans Agy99	4551305
YP_907789.1	CDS	dnaQ	NC_008611.1	4779747	4780736	R	3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon	complement(4779747..4780736)	Mycobacterium ulcerans Agy99	4551306
YP_907790.1	CDS	MUL_4304	NC_008611.1	4780969	4782123	D	membrane protein; possible role in cell wall peptidoglycan biogenesis. contains Mur ligase family catalytic domain. possible UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase, required for the formation of the UDP- MurNAc-linked pentapeptide by addition of the D-Ala-D-Ala subgroup.; UDP-N-acetylmuramyl tripeptide synthase	4780969..4782123	Mycobacterium ulcerans Agy99	4551307
YP_907791.1	CDS	cobQ2	NC_008611.1	4782116	4782823	D	cytoplasmic protein; involved in cobalamin biosynthesis. catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic a,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation (by similarity); cobyric acid synthase CobQ2	4782116..4782823	Mycobacterium ulcerans Agy99	4551308
YP_907792.1	CDS	recR	NC_008611.1	4782839	4783450	R	involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR	complement(4782839..4783450)	Mycobacterium ulcerans Agy99	4551309
YP_907793.1	CDS	MUL_4307	NC_008611.1	4783462	4783905	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(4783462..4783905)	Mycobacterium ulcerans Agy99	4551310
YP_907794.1	CDS	MUL_4308	NC_008611.1	4784040	4784765	D	membrane protein; hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides.; N-acetylmuramoyl-L-alanine amidase	4784040..4784765	Mycobacterium ulcerans Agy99	4551311
YP_907795.1	CDS	MUL_4309	NC_008611.1	4784762	4785220	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; function unknown, contains bet v1-like superfamily domain; hypothetical protein	complement(4784762..4785220)	Mycobacterium ulcerans Agy99	4551312
YP_907796.1	CDS	MUL_4310	NC_008611.1	4785333	4786658	D	cytoplasmic protein; dehydrogenase	4785333..4786658	Mycobacterium ulcerans Agy99	4551313
YP_907797.1	CDS	MUL_4312	NC_008611.1	4787982	4788224	D	membrane protein; hypothetical protein	4787982..4788224	Mycobacterium ulcerans Agy99	4551315
YP_907798.1	CDS	MUL_4313	NC_008611.1	4788221	4788766	D	cytoplasmic protein; hypothetical protein	4788221..4788766	Mycobacterium ulcerans Agy99	4551316
YP_907799.1	CDS	MUL_4314	NC_008611.1	4788763	4789134	D	cytoplasmic protein; hypothetical protein	4788763..4789134	Mycobacterium ulcerans Agy99	4551317
YP_907800.1	CDS	dnaZX	NC_008611.1	4789288	4791153	R	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau	complement(4789288..4791153)	Mycobacterium ulcerans Agy99	4551318
YP_907801.1	CDS	MUL_4316	NC_008611.1	4791212	4792498	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the extracellular matrix and the membrane fractions by proteomics.; cytoplasmic protein; transcriptional regulator	complement(4791212..4792498)	Mycobacterium ulcerans Agy99	4551319
YP_907802.1	CDS	MUL_4318	NC_008611.1	4792943	4793758	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	4792943..4793758	Mycobacterium ulcerans Agy99	4551321
YP_907803.1	CDS	echA3_1	NC_008611.1	4793790	4794551	R	Detected in the cytoplasmic fraction by proteomics; cytoplasmic protein; oxidizes fatty acids using specific components [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA3	complement(4793790..4794551)	Mycobacterium ulcerans Agy99	4550279
YP_907804.1	CDS	MUL_4320	NC_008611.1	4794652	4795122	D	membrane protein; 19 kDa lipoprotein antigen LpqH-like protein	4794652..4795122	Mycobacterium ulcerans Agy99	4550280
YP_907805.1	CDS	MUL_4324	NC_008611.1	4798616	4799947	D	cytoplasmic protein; hypothetical protein	4798616..4799947	Mycobacterium ulcerans Agy99	4550284
YP_907806.1	CDS	MUL_4325	NC_008611.1	4799944	4801098	D	cytoplasmic protein; hypothetical protein	4799944..4801098	Mycobacterium ulcerans Agy99	4550285
YP_907807.1	CDS	cut5	NC_008611.1	4802348	4803043	D	secreted protein; hydrolysis of cutin (a polyester that forms the structure of plant cuticle); cutinase	4802348..4803043	Mycobacterium ulcerans Agy99	4550287
YP_907808.1	CDS	MUL_4328	NC_008611.1	4803084	4804076	D	membrane protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	4803084..4804076	Mycobacterium ulcerans Agy99	4550288
YP_907809.1	CDS	MUL_4330	NC_008611.1	4804272	4804655	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(4804272..4804655)	Mycobacterium ulcerans Agy99	4550289
YP_907810.1	CDS	MUL_4332	NC_008611.1	4808057	4808368	D	cytoplasmic protein; hypothetical protein	4808057..4808368	Mycobacterium ulcerans Agy99	4550291
YP_907811.1	CDS	MUL_4333	NC_008611.1	4808365	4808943	D	cytoplasmic protein; hypothetical protein	4808365..4808943	Mycobacterium ulcerans Agy99	4550292
YP_907812.1	CDS	MUL_4336	NC_008611.1	4812375	4812689	D	PE5_1; Detected in the membrane fraction by proteomics.; membrane protein; PE family protein	4812375..4812689	Mycobacterium ulcerans Agy99	4550294
YP_907813.1	CDS	MUL_4338	NC_008611.1	4813978	4814388	R	cytoplasmic protein; hypothetical protein	complement(4813978..4814388)	Mycobacterium ulcerans Agy99	4550296
YP_907814.1	CDS	MUL_4339	NC_008611.1	4814427	4815467	R	cytoplasmic protein; hypothetical protein	complement(4814427..4815467)	Mycobacterium ulcerans Agy99	4550297
YP_907815.1	CDS	ligC	NC_008611.1	4815505	4816581	D	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth; ATP-dependent DNA ligase	4815505..4816581	Mycobacterium ulcerans Agy99	4550500
YP_907816.1	CDS	MUL_4341	NC_008611.1	4816680	4817222	D	cytoplasmic protein; hypothetical protein	4816680..4817222	Mycobacterium ulcerans Agy99	4550501
YP_907817.1	CDS	MUL_4343	NC_008611.1	4818580	4819674	D	membrane protein; hypothetical protein	4818580..4819674	Mycobacterium ulcerans Agy99	4550503
YP_907818.1	CDS	MUL_4344	NC_008611.1	4819615	4820043	R	cytoplasmic protein; hypothetical protein	complement(4819615..4820043)	Mycobacterium ulcerans Agy99	4550504
YP_907819.1	CDS	acrA1_1	NC_008611.1	4821484	4822563	R	cytoplasmic protein; function unknown, involved in cellular metabolism; multi-functional enzyme with acyl-CoA-reductase activity AcrA1	complement(4821484..4822563)	Mycobacterium ulcerans Agy99	4550506
YP_907820.1	CDS	MUL_4347	NC_008611.1	4822749	4823555	D	cytoplasmic protein; hypothetical protein	4822749..4823555	Mycobacterium ulcerans Agy99	4550507
YP_907821.1	CDS	MUL_4348	NC_008611.1	4823718	4824110	D	membrane protein; hypothetical protein	4823718..4824110	Mycobacterium ulcerans Agy99	4550508
YP_907822.1	CDS	fadD15_1	NC_008611.1	4824127	4825929	R	cytoplasmic protein; function unknown, but involved in lipid degradation.; long-chain-fatty-acid-CoA ligase FadD15	complement(4824127..4825929)	Mycobacterium ulcerans Agy99	4550509
YP_907823.1	CDS	MUL_4350	NC_008611.1	4826189	4827208	D	cytoplasmic protein; involved in transcriptional mechanism.; AraC/XylS family transcriptional regulator	4826189..4827208	Mycobacterium ulcerans Agy99	4550510
YP_907824.1	CDS	MUL_4351	NC_008611.1	4827300	4828649	R	membrane protein; hypothetical protein	complement(4827300..4828649)	Mycobacterium ulcerans Agy99	4550511
YP_907825.1	CDS	MUL_4352	NC_008611.1	4828702	4830201	R	Detected in the secreted fraction by proteomics.; secreted protein; function unknown role in oxidoreduction; monooxygenase-like flavoprotein	complement(4828702..4830201)	Mycobacterium ulcerans Agy99	4550512
YP_907826.1	CDS	MUL_4353	NC_008611.1	4830507	4831592	D	cytoplasmic protein; hypothetical protein	4830507..4831592	Mycobacterium ulcerans Agy99	4550513
YP_907827.1	CDS	MUL_4354	NC_008611.1	4831589	4832404	D	cytoplasmic protein; short chain dehydrogenase	4831589..4832404	Mycobacterium ulcerans Agy99	4550514
YP_907828.1	CDS	serA4	NC_008611.1	4832399	4833433	R	cytoplasmic protein; involved at the first committed step in the 'phosphorylated' pathway of L-serine biosynthesis [catalytic activity: 3-phosphoglycerate + NAD(+) = 3- phosphohydroxypyruvate + NADH]; D-3-phosphoglycerate dehydrogenase	complement(4832399..4833433)	Mycobacterium ulcerans Agy99	4550515
YP_907829.1	CDS	MUL_4356	NC_008611.1	4833556	4837482	D	membrane protein; involved in lipid metabolism.; non-ribosomal peptide synthetase	4833556..4837482	Mycobacterium ulcerans Agy99	4550516
YP_907830.1	CDS	pepN_1	NC_008611.1	4837479	4838804	D	cytoplasmic protein; aminopeptidase with broad substrate specificity to several peptides (could preferentially cleave leucine, arginine and lysine in peptide-bond-containing substrates); aminopeptidase N PepN	4837479..4838804	Mycobacterium ulcerans Agy99	4550517
YP_907831.1	CDS	MUL_4358	NC_008611.1	4838817	4839203	R	cytoplasmic protein; hypothetical protein	complement(4838817..4839203)	Mycobacterium ulcerans Agy99	4550518
YP_907832.1	CDS	MUL_4359	NC_008611.1	4839268	4839603	R	PE34; membrane protein; PE family protein	complement(4839268..4839603)	Mycobacterium ulcerans Agy99	4550519
YP_907833.1	CDS	MUL_4360	NC_008611.1	4840149	4840532	D	cytoplasmic protein; hypothetical protein	4840149..4840532	Mycobacterium ulcerans Agy99	4550399
YP_907834.1	CDS	MUL_4361	NC_008611.1	4840662	4841399	R	cytoplasmic protein; function unknown, supposed involvement in cellular metabolism.; short-chain type dehydrogenase/reductase	complement(4840662..4841399)	Mycobacterium ulcerans Agy99	4550400
YP_907835.1	CDS	MUL_4362	NC_008611.1	4841408	4842664	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hydrolase	complement(4841408..4842664)	Mycobacterium ulcerans Agy99	4550401
YP_907836.1	CDS	MUL_4363	NC_008611.1	4842661	4843932	R	cytoplasmic protein; hypothetical protein	complement(4842661..4843932)	Mycobacterium ulcerans Agy99	4550402
YP_907837.1	CDS	MUL_4364	NC_008611.1	4844061	4844546	D	membrane protein; hypothetical protein	4844061..4844546	Mycobacterium ulcerans Agy99	4550403
YP_907838.1	CDS	MUL_4365	NC_008611.1	4844618	4845001	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; unknwon; hypothetical protein	4844618..4845001	Mycobacterium ulcerans Agy99	4550404
YP_907839.1	CDS	MUL_4366	NC_008611.1	4845060	4845419	D	cytoplasmic protein; hypothetical protein	4845060..4845419	Mycobacterium ulcerans Agy99	4550405
YP_907840.1	CDS	MUL_4367	NC_008611.1	4845511	4848744	R	membrane protein; PE-PGRS family protein	complement(4845511..4848744)	Mycobacterium ulcerans Agy99	4550406
YP_907841.1	CDS	MUL_4368	NC_008611.1	4848805	4850139	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(4848805..4850139)	Mycobacterium ulcerans Agy99	4550407
YP_907842.1	CDS	MUL_4370	NC_008611.1	4850766	4851224	R	cytoplasmic protein; function unknown, probably involved in deamination of specific substrate.; cytidine/deoxycytidylate deaminase	complement(4850766..4851224)	Mycobacterium ulcerans Agy99	4550409
YP_907843.1	CDS	MUL_4371	NC_008611.1	4851221	4851742	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(4851221..4851742)	Mycobacterium ulcerans Agy99	4550410
YP_907844.1	CDS	tyrA	NC_008611.1	4851874	4852818	D	catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase	4851874..4852818	Mycobacterium ulcerans Agy99	4550411
YP_907845.1	CDS	MUL_4373	NC_008611.1	4852781	4853380	R	cytoplasmic protein; hypothetical protein	complement(4852781..4853380)	Mycobacterium ulcerans Agy99	4550412
YP_907846.1	CDS	proZ	NC_008611.1	4853385	4854131	R	membrane protein; thought to be involved in active transport of osmoprotectant (glycine betaine/carnitine/choline/L- proline) across the membrane (import) responsible for the translocation of the substrate across the membrane.; osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ	complement(4853385..4854131)	Mycobacterium ulcerans Agy99	4550413
YP_907847.1	CDS	proW	NC_008611.1	4854128	4854808	R	membrane protein; thought to be involved in active transport of osmoprotectant (glycine betaine/carnitine/choline/L- proline) across the membrane (import) responsible for the translocation of the substrate across the membrane.; osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProW	complement(4854128..4854808)	Mycobacterium ulcerans Agy99	4550383
YP_907848.1	CDS	proX	NC_008611.1	4855925	4856872	R	secreted protein; thought to be involved in active transport of osmoprotectant (glycine betaine/carnitine/choline/L- proline) across the membrane (import); osmoprotectant (glycine betaine/carnitine/choline/L-proline) binding lipoprotein ProX	complement(4855925..4856872)	Mycobacterium ulcerans Agy99	4550385
YP_907849.1	CDS	MUL_4378	NC_008611.1	4856987	4857364	D	membrane protein; hypothetical protein	4856987..4857364	Mycobacterium ulcerans Agy99	4550386
YP_907850.1	CDS	MUL_4380	NC_008611.1	4858571	4859179	R	cytoplasmic protein; hypothetical protein	complement(4858571..4859179)	Mycobacterium ulcerans Agy99	4550388
YP_907851.1	CDS	MUL_4381	NC_008611.1	4859588	4862377	D	secreted protein; PE-PGRS family protein	4859588..4862377	Mycobacterium ulcerans Agy99	4550389
YP_907852.1	CDS	MUL_4383	NC_008611.1	4863715	4864767	D	cytoplasmic protein; hypothetical protein	4863715..4864767	Mycobacterium ulcerans Agy99	4550391
YP_907853.1	CDS	MUL_4384	NC_008611.1	4864769	4865533	D	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short-chain type dehydrogenase/reductase	4864769..4865533	Mycobacterium ulcerans Agy99	4550392
YP_907854.1	CDS	fadE1_1	NC_008611.1	4865551	4866858	D	cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE1	4865551..4866858	Mycobacterium ulcerans Agy99	4550393
YP_907855.1	CDS	MUL_4386	NC_008611.1	4866855	4867457	D	cytoplasmic protein; hypothetical protein	4866855..4867457	Mycobacterium ulcerans Agy99	4550394
YP_907856.1	CDS	MUL_4387	NC_008611.1	4867458	4868426	D	membrane protein; possibly binds NADP and acts through a one-electron transfer process. quinones are supposed to be the best substrates. may act in the detoxification of xenobiotics [catalytic activity: NADPH + quinone = NADP+ + semiquinone]; quinone oxidoreductase	4867458..4868426	Mycobacterium ulcerans Agy99	4550395
YP_907857.1	CDS	MUL_4388	NC_008611.1	4868466	4870313	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hydrolase	complement(4868466..4870313)	Mycobacterium ulcerans Agy99	4550396
YP_907858.1	CDS	lpqH	NC_008611.1	4870493	4870978	D	secreted protein; 19 kDa lipoprotein antigen precursor LpqH	4870493..4870978	Mycobacterium ulcerans Agy99	4550397
YP_907859.1	CDS	tcrX	NC_008611.1	4872737	4873441	R	cytoplasmic protein; sensor part of a two component regulatory system.; two component transcriptional regulatory protein TcrX	complement(4872737..4873441)	Mycobacterium ulcerans Agy99	4550557
YP_907860.1	CDS	MUL_4392	NC_008611.1	4873519	4874853	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	4873519..4874853	Mycobacterium ulcerans Agy99	4550558
YP_907861.1	CDS	MUL_4394	NC_008611.1	4876384	4876539	R	membrane protein; hypothetical protein	complement(4876384..4876539)	Mycobacterium ulcerans Agy99	4550560
YP_907862.1	CDS	MUL_4397	NC_008611.1	4877141	4878475	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(4877141..4878475)	Mycobacterium ulcerans Agy99	4550563
YP_907863.1	CDS	MUL_4398	NC_008611.1	4878906	4879952	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	4878906..4879952	Mycobacterium ulcerans Agy99	4550564
YP_907864.1	CDS	MUL_4399	NC_008611.1	4880207	4881649	R	membrane protein; PE-PGRS family protein	complement(4880207..4881649)	Mycobacterium ulcerans Agy99	4550565
YP_907865.1	CDS	MUL_4400	NC_008611.1	4881794	4883275	R	membrane protein; PE-PGRS family protein	complement(4881794..4883275)	Mycobacterium ulcerans Agy99	4550566
YP_907866.1	CDS	MUL_4401	NC_008611.1	4883410	4884456	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4883410..4884456)	Mycobacterium ulcerans Agy99	4550567
YP_907867.1	CDS	MUL_4402	NC_008611.1	4884825	4885769	R	cytoplasmic protein; function unknown, may play a role in secondary metabolites biosynthesis, transport, and catabolism.; O-methyltransferase	complement(4884825..4885769)	Mycobacterium ulcerans Agy99	4550568
YP_907868.1	CDS	MUL_4403	NC_008611.1	4885894	4886241	D	cytoplasmic protein; hypothetical protein	4885894..4886241	Mycobacterium ulcerans Agy99	4550569
YP_907869.1	CDS	MUL_4404	NC_008611.1	4886283	4887275	D	cytoplasmic protein; hypothetical protein	4886283..4887275	Mycobacterium ulcerans Agy99	4549887
YP_907870.1	CDS	hisC2	NC_008611.1	4887661	4888746	D	cytoplasmic protein; involved in histidine biosynthetic pathway (at the eighth step) [catalytic activity: L-histidinol-phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + glutamate]; putative aminotransferase	4887661..4888746	Mycobacterium ulcerans Agy99	4549890
YP_907871.1	CDS	MUL_4408	NC_008611.1	4888743	4889180	D	cytoplasmic protein; hypothetical protein	4888743..4889180	Mycobacterium ulcerans Agy99	4549891
YP_907872.1	CDS	MUL_4409	NC_008611.1	4889228	4889812	R	cytoplasmic protein; hypothetical protein	complement(4889228..4889812)	Mycobacterium ulcerans Agy99	4549892
YP_907873.1	CDS	MUL_4410	NC_008611.1	4889836	4891941	D	Point mutation has removed stop codon and translationally coupled EchA21 with LipE; Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; function unknown, lipolytic enzyme probably involved in lipid metabolism.; fusion of enoyl-CoA hydratase, EchA21 and lipase, LipE	4889836..4891941	Mycobacterium ulcerans Agy99	4549893
YP_907874.1	CDS	MUL_4412	NC_008611.1	4892343	4893347	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4892343..4893347)	Mycobacterium ulcerans Agy99	4549895
YP_907875.1	CDS	MUL_4413	NC_008611.1	4895350	4895664	D	cytoplasmic protein; hypothetical protein	4895350..4895664	Mycobacterium ulcerans Agy99	4549897
YP_907876.1	CDS	MUL_4415	NC_008611.1	4896524	4897570	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4896524..4897570)	Mycobacterium ulcerans Agy99	4549899
YP_907877.1	CDS	pgi	NC_008611.1	4898115	4899779	D	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase	4898115..4899779	Mycobacterium ulcerans Agy99	4549900
YP_907878.1	CDS	MUL_4417	NC_008611.1	4899879	4900628	R	Also detected in the membrane and the cytoplasmic fractions by proteomics; secreted protein; function unknown, possibly involved in cellular metabolism.; short chain dehydrogenase	complement(4899879..4900628)	Mycobacterium ulcerans Agy99	4549901
YP_907879.1	CDS	MUL_4418	NC_008611.1	4900716	4901579	R	Detected in the cytoplamic fraction by LCMSMS; cytoplasmic protein; this enzyme may play a significant role in processes leading to recovery from mutagenesis and/or cell death by alkylating agents [catalytic activity: hydrolysis of DNA containing ring-opened N7-methylguanine residues, releasing 2,6-diamino-4-hydroxy-5-(N- methyl)formamidopyrimide]; formamidopyrimidine-DNA glycosylase	complement(4900716..4901579)	Mycobacterium ulcerans Agy99	4550209
YP_907880.1	CDS	MUL_4419	NC_008611.1	4901627	4902679	R	membrane protein; PE-PGRS family protein	complement(4901627..4902679)	Mycobacterium ulcerans Agy99	4550210
YP_907881.1	CDS	MUL_4422	NC_008611.1	4906235	4906978	R	catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase	complement(4906235..4906978)	Mycobacterium ulcerans Agy99	4550213
YP_907882.1	CDS	MUL_4424	NC_008611.1	4907116	4908039	D	membrane protein; hypothetical protein	4907116..4908039	Mycobacterium ulcerans Agy99	4550214
YP_907883.1	CDS	MUL_4425	NC_008611.1	4908129	4909340	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; monooxygenase	4908129..4909340	Mycobacterium ulcerans Agy99	4550215
YP_907884.1	CDS	MUL_4427	NC_008611.1	4909897	4910661	D	membrane protein; hypothetical protein	4909897..4910661	Mycobacterium ulcerans Agy99	4550216
YP_907885.1	CDS	echA12_2	NC_008611.1	4911680	4912471	R	cytoplasmic protein; oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA12_2	complement(4911680..4912471)	Mycobacterium ulcerans Agy99	4550218
YP_907886.1	CDS	MUL_4430	NC_008611.1	4912594	4913517	D	cytoplasmic protein; hypothetical protein	4912594..4913517	Mycobacterium ulcerans Agy99	4550219
YP_907887.1	CDS	MUL_4431	NC_008611.1	4913637	4915358	D	membrane protein; PE-PGRS family protein	4913637..4915358	Mycobacterium ulcerans Agy99	4550220
YP_907888.1	CDS	MUL_4434	NC_008611.1	4917308	4919620	R	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; ATP-dependent DNA ligase	complement(4917308..4919620)	Mycobacterium ulcerans Agy99	4550222
YP_907889.1	CDS	pfkB	NC_008611.1	4919643	4920554	D	membrane protein; ATP + D-fructose = ADP + D-fructose 6-phosphate; fructokinase, PfkB	4919643..4920554	Mycobacterium ulcerans Agy99	4550223
YP_907890.1	CDS	MUL_4436	NC_008611.1	4920726	4921601	D	cytoplasmic protein; hypothetical protein	4920726..4921601	Mycobacterium ulcerans Agy99	4550224
YP_907891.1	CDS	pstS2	NC_008611.1	4921675	4922778	D	Detected in the membrane fraction by proteomics.; membrane protein; involved in active transport of inorganic phosphate across the membrane (import) this is one of the proteins required for binding-protein-mediated phosphate transport.; periplasmic phosphate-binding lipoprotein PstS2	4921675..4922778	Mycobacterium ulcerans Agy99	4550225
YP_907892.1	CDS	pstA1	NC_008611.1	4925201	4926103	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in active transport of inorganic phosphate across the membrane (import); responsible for the translocation of the substrate across the membrane. this is one of the proteins required for binding-protein- mediated phosphate transport.; phosphate-transport integral membrane ABC transporter PstA1	complement(4925201..4926103)	Mycobacterium ulcerans Agy99	4550227
YP_907893.1	CDS	pstC2	NC_008611.1	4926100	4927074	R	membrane protein; involved in active transport of inorganic phosphate across the membrane (import); responsible for the translocation of the substrate across the membrane. this is one of the proteins required for binding-protein- mediated phosphate transport.; phosphate-transport integral membrane ABC transporter PstC2	complement(4926100..4927074)	Mycobacterium ulcerans Agy99	4550228
YP_907894.1	CDS	phoS2	NC_008611.1	4927087	4928199	R	Detected in the membrane and the secreted protein fractions by proteomics.; secreted protein; involved in active transport of inorganic phosphate across the membrane (import) this is one of the proteins required for binding-protein-mediated phosphate transport.; periplasmic phosphate-binding lipoprotein PhoS2	complement(4927087..4928199)	Mycobacterium ulcerans Agy99	4550229
YP_907895.1	CDS	MUL_4442	NC_008611.1	4928533	4929324	D	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short chain dehydrogenase	4928533..4929324	Mycobacterium ulcerans Agy99	4550230
YP_907896.1	CDS	MUL_4444	NC_008611.1	4930549	4931283	D	hypothetical protein	4930549..4931283	Mycobacterium ulcerans Agy99	4550232
YP_907897.1	CDS	mntH	NC_008611.1	4931363	4932589	D	membrane protein; H(+)-stimulated, highly selective, divalent cation uptake system. responsible for the translocation of the divalent metal across the membrane.; manganese transport protein MntH	4931363..4932589	Mycobacterium ulcerans Agy99	4550233
YP_907898.1	CDS	MUL_4446	NC_008611.1	4932755	4933084	D	secreted protein; hypothetical protein	4932755..4933084	Mycobacterium ulcerans Agy99	4550234
YP_907899.1	CDS	MUL_4447	NC_008611.1	4933201	4934238	D	CDS appears to have been formed by a DNA deletion that fused the N-term of a conserved hypothetical protein with the C-term of a putative oxidoreductase (MON4219); cytoplasmic protein; hypothetical protein	4933201..4934238	Mycobacterium ulcerans Agy99	4550235
YP_907900.1	CDS	MUL_4449	NC_008611.1	4934427	4934579	R	cytoplasmic protein; hypothetical protein	complement(4934427..4934579)	Mycobacterium ulcerans Agy99	4550237
YP_907901.1	CDS	MUL_4450	NC_008611.1	4934757	4935671	R	cytoplasmic protein; hypothetical protein	complement(4934757..4935671)	Mycobacterium ulcerans Agy99	4550238
YP_907902.1	CDS	MUL_4451	NC_008611.1	4935896	4936195	D	cytoplasmic protein; hypothetical protein	4935896..4936195	Mycobacterium ulcerans Agy99	4550239
YP_907903.1	CDS	MUL_4453	NC_008611.1	4938729	4939241	R	cytoplasmic protein; hypothetical protein	complement(4938729..4939241)	Mycobacterium ulcerans Agy99	4550241
YP_907904.1	CDS	MUL_4454	NC_008611.1	4939315	4939896	D	cytoplasmic protein; transposition of an insertion sequence. possibly IS200 family.; transposase	4939315..4939896	Mycobacterium ulcerans Agy99	4550242
YP_907905.1	CDS	MUL_4455	NC_008611.1	4939739	4940296	R	membrane protein; hypothetical protein	complement(4939739..4940296)	Mycobacterium ulcerans Agy99	4550192
YP_907906.1	CDS	MUL_4456	NC_008611.1	4940510	4941820	R	membrane protein; PPE family protein	complement(4940510..4941820)	Mycobacterium ulcerans Agy99	4550193
YP_907907.1	CDS	MUL_4458	NC_008611.1	4942872	4943651	D	membrane protein; hypothetical protein	4942872..4943651	Mycobacterium ulcerans Agy99	4550194
YP_907908.1	CDS	MUL_4459	NC_008611.1	4943924	4944157	D	membrane protein; hypothetical protein	4943924..4944157	Mycobacterium ulcerans Agy99	4550195
YP_907909.1	CDS	MUL_4460	NC_008611.1	4944423	4944887	D	cytoplasmic protein; hypothetical protein	4944423..4944887	Mycobacterium ulcerans Agy99	4550196
YP_907910.1	CDS	MUL_4461	NC_008611.1	4945577	4946380	D	membrane protein; hypothetical protein	4945577..4946380	Mycobacterium ulcerans Agy99	4550197
YP_907911.1	CDS	MUL_4462	NC_008611.1	4946694	4946993	D	membrane protein; PE family protein	4946694..4946993	Mycobacterium ulcerans Agy99	4550198
YP_907912.1	CDS	MUL_4463	NC_008611.1	4946999	4948270	D	membrane protein; function unknown. possibly a protective antigen involved with the early control of infection.; PPE family protein	4946999..4948270	Mycobacterium ulcerans Agy99	4550199
YP_907913.1	CDS	MUL_4465	NC_008611.1	4949701	4951035	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(4949701..4951035)	Mycobacterium ulcerans Agy99	4550201
YP_907914.1	CDS	MUL_4469	NC_008611.1	4955972	4956496	R	cytoplasmic protein; function unknown. seems to be expressed during macrophage infection.; hypothetical protein	complement(4955972..4956496)	Mycobacterium ulcerans Agy99	4550204
YP_907915.1	CDS	MUL_4470	NC_008611.1	4956797	4957978	R	cytoplasmic protein; possibly involved in camp synthesis [catalytic activity: ATP = 3',5'-cyclic AMP + diphosphate]; adenylate cyclase	complement(4956797..4957978)	Mycobacterium ulcerans Agy99	4550205
YP_907916.1	CDS	pknF	NC_008611.1	4958078	4959565	D	cytoplasmic protein; involved in signal transduction (via phosphorylation) thought to be involved in membrane transport. phosphorylates the peptide substrate myelin basic protein (MBP) at serine and threonine residues [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; anchored-membrane serine/threonine-protein kinase PknF	4958078..4959565	Mycobacterium ulcerans Agy99	4550206
YP_907917.1	CDS	MUL_4473	NC_008611.1	4959831	4960877	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4959831..4960877)	Mycobacterium ulcerans Agy99	4550208
YP_907918.1	CDS	MUL_4474	NC_008611.1	4961281	4962615	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(4961281..4962615)	Mycobacterium ulcerans Agy99	4549793
YP_907919.1	CDS	MUL_4476	NC_008611.1	4963728	4964774	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	4963728..4964774	Mycobacterium ulcerans Agy99	4549796
YP_907920.1	CDS	amiB2	NC_008611.1	4965103	4966491	R	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase	complement(4965103..4966491)	Mycobacterium ulcerans Agy99	4549797
YP_907921.1	CDS	MUL_4479	NC_008611.1	4966594	4967022	D	cytoplasmic protein; Hit-like protein	4966594..4967022	Mycobacterium ulcerans Agy99	4549798
YP_907922.1	CDS	MUL_4480	NC_008611.1	4967033	4967485	D	hypothetical protein	4967033..4967485	Mycobacterium ulcerans Agy99	4549799
YP_907923.1	CDS	MUL_4481	NC_008611.1	4967494	4968546	R	cytoplasmic protein; monooxygenase	complement(4967494..4968546)	Mycobacterium ulcerans Agy99	4549800
YP_907924.1	CDS	MUL_4482	NC_008611.1	4968584	4969720	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hypothetical protein	complement(4968584..4969720)	Mycobacterium ulcerans Agy99	4549801
YP_907925.1	CDS	MUL_4483	NC_008611.1	4969724	4970551	R	cytoplasmic protein; hypothetical protein	complement(4969724..4970551)	Mycobacterium ulcerans Agy99	4549802
YP_907926.1	CDS	MUL_4485	NC_008611.1	4971932	4973299	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; oxidoreductase	4971932..4973299	Mycobacterium ulcerans Agy99	4549804
YP_907927.1	CDS	MUL_4487	NC_008611.1	4974745	4975326	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	4974745..4975326	Mycobacterium ulcerans Agy99	4549806
YP_907928.1	CDS	MUL_4489	NC_008611.1	4975841	4977163	D	membrane protein; PE-PGRS family protein	4975841..4977163	Mycobacterium ulcerans Agy99	4549807
YP_907929.1	CDS	MUL_4490	NC_008611.1	4977316	4977537	R	cytoplasmic protein; hypothetical protein	complement(4977316..4977537)	Mycobacterium ulcerans Agy99	4549808
YP_907930.1	CDS	MUL_4491	NC_008611.1	4977801	4978550	D	membrane protein; PPE family protein	4977801..4978550	Mycobacterium ulcerans Agy99	4549809
YP_907931.1	CDS	MUL_4492	NC_008611.1	4978641	4979783	R	membrane protein; catalyzes the acylation of the mycaminose sugar during midecamycin biosynthesis; integral membrane acyltransferase	complement(4978641..4979783)	Mycobacterium ulcerans Agy99	4549810
YP_907932.1	CDS	lprE	NC_008611.1	4981662	4982258	D	membrane protein; lipoprotein LprE	4981662..4982258	Mycobacterium ulcerans Agy99	4549921
YP_907933.1	CDS	MUL_4495	NC_008611.1	4982341	4985748	D	cytoplasmic protein; hypothetical protein	4982341..4985748	Mycobacterium ulcerans Agy99	4549922
YP_907934.1	CDS	MUL_4497	NC_008611.1	4986928	4987245	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(4986928..4987245)	Mycobacterium ulcerans Agy99	4549924
YP_907935.1	CDS	MUL_4498	NC_008611.1	4987270	4987974	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(4987270..4987974)	Mycobacterium ulcerans Agy99	4549925
YP_907936.1	CDS	MUL_4499	NC_008611.1	4989118	4989876	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	4989118..4989876	Mycobacterium ulcerans Agy99	4549926
YP_907937.1	CDS	kgd	NC_008611.1	4990076	4993792	D	kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; alpha-ketoglutarate decarboxylase	4990076..4993792	Mycobacterium ulcerans Agy99	4549927
YP_907938.1	CDS	MUL_4501	NC_008611.1	4993949	4994782	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; function unknown, supposed involved in cellular metabolism.; short-chain type dehydrogenase/reductase	4993949..4994782	Mycobacterium ulcerans Agy99	4549928
YP_907939.1	CDS	lpqZ	NC_008611.1	4994819	4995670	R	secreted protein; lipoprotein LpqZ	complement(4994819..4995670)	Mycobacterium ulcerans Agy99	4549929
YP_907940.1	CDS	mez_1	NC_008611.1	4995682	4996896	R	membrane protein; catalizes the oxidative decarboxylation of malate into pyruvate, important for a wide range of metabolic pathways [catalytic activity: (S)-malate + NAD(+) = pyruvate + CO(2) + NADH]; [NAD] dependent malate oxidoreductase Mez	complement(4995682..4996896)	Mycobacterium ulcerans Agy99	4549930
YP_907941.1	CDS	mdh	NC_008611.1	4997055	4998044	R	catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase	complement(4997055..4998044)	Mycobacterium ulcerans Agy99	4549931
YP_907942.1	CDS	MUL_4506	NC_008611.1	4998758	4999804	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(4998758..4999804)	Mycobacterium ulcerans Agy99	4549933
YP_907943.1	CDS	fgd2	NC_008611.1	5000709	5001854	R	cytoplasmic protein; catalyzes oxidation of glucose-6-phosphate to 6- phosphogluconolactone using coenzyme F420 (an *-hydroxy-5- deazaflavin derivative) as the electron acceptor.; F420-dependent glucose-6-phosphate dehydrogenase Fgd2	complement(5000709..5001854)	Mycobacterium ulcerans Agy99	4549934
YP_907944.1	CDS	gabP_1	NC_008611.1	5002096	5003541	R	membrane protein; involved in 4-aminobutyrate (GabA) degradation pathway. transporter for GabA. responsible for the translocation of the substrate across the membrane.; GabA permease GabP	complement(5002096..5003541)	Mycobacterium ulcerans Agy99	4549935
YP_907945.1	CDS	MUL_4509	NC_008611.1	5003822	5004394	R	membrane protein; hypothetical protein	complement(5003822..5004394)	Mycobacterium ulcerans Agy99	4549936
YP_907946.1	CDS	sugB	NC_008611.1	5005603	5006346	R	membrane protein; involved in active transport of sugar across the membrane (import) responsible for the translocation of the substrate across the membrane.; sugar-transport integral membrane protein ABC transporter SugB	complement(5005603..5006346)	Mycobacterium ulcerans Agy99	4549903
YP_907947.1	CDS	sugA	NC_008611.1	5006343	5007380	R	secreted protein; involved in active transport of sugar across the membrane (import) responsible for the translocation of the substrate across the membrane.; sugar-transport integral membrane protein ABC transporter SugA	complement(5006343..5007380)	Mycobacterium ulcerans Agy99	4549904
YP_907948.1	CDS	MUL_4514	NC_008611.1	5008259	5009665	D	membrane protein	5008259..5009665	Mycobacterium ulcerans Agy99	4549906
YP_907949.1	CDS	mrp	NC_008611.1	5009717	5010877	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown: thought to be an ATP-binding protein.; Mrp-related protein Mrp	5009717..5010877	Mycobacterium ulcerans Agy99	4549907
YP_907950.1	CDS	tatB	NC_008611.1	5010893	5011285	R	mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase	complement(5010893..5011285)	Mycobacterium ulcerans Agy99	4549908
YP_907951.1	CDS	htrA	NC_008611.1	5011285	5012799	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; possibly hydrolyzes peptides and/or proteins (seems to cleave preferentially after serine residue); serine protease HtrA (DegP protein)	complement(5011285..5012799)	Mycobacterium ulcerans Agy99	4549909
YP_907952.1	CDS	MUL_4518	NC_008611.1	5012971	5013375	R	cytoplasmic protein; hypothetical protein	complement(5012971..5013375)	Mycobacterium ulcerans Agy99	4549910
YP_907953.1	CDS	sigE	NC_008611.1	5013521	5014288	R	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein is involved in heat shock, oxidative stress and virulence; RNA polymerase sigma factor SigE	complement(5013521..5014288)	Mycobacterium ulcerans Agy99	4549911
YP_907954.1	CDS	MUL_4520	NC_008611.1	5014511	5015185	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, involved in cellular metabolism; methyltransferase	5014511..5015185	Mycobacterium ulcerans Agy99	4549912
YP_907955.1	CDS	MUL_4523	NC_008611.1	5018053	5018727	D	membrane protein; integral membrane protein	5018053..5018727	Mycobacterium ulcerans Agy99	4549915
YP_907956.1	CDS	MUL_4524	NC_008611.1	5018940	5020202	D	membrane protein; PE-PGRS family protein	5018940..5020202	Mycobacterium ulcerans Agy99	4549916
YP_907957.1	CDS	glgC	NC_008611.1	5021850	5023064	R	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase	complement(5021850..5023064)	Mycobacterium ulcerans Agy99	4549918
YP_907958.1	CDS	MUL_4529	NC_008611.1	5026333	5027379	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5026333..5027379)	Mycobacterium ulcerans Agy99	4549812
YP_907959.1	CDS	MUL_4531	NC_008611.1	5031585	5032919	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(5031585..5032919)	Mycobacterium ulcerans Agy99	4549814
YP_907960.1	CDS	MUL_4533	NC_008611.1	5033771	5034337	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; hypothetical protein	complement(5033771..5034337)	Mycobacterium ulcerans Agy99	4549816
YP_907961.1	CDS	MUL_4534	NC_008611.1	5034334	5035758	R	cytoplasmic protein; possibly involved in transcriptional mechanism.; transcriptional regulatory protein	complement(5034334..5035758)	Mycobacterium ulcerans Agy99	4549817
YP_907962.1	CDS	MUL_4535	NC_008611.1	5035933	5036727	D	cytoplasmic protein; hypothetical protein	5035933..5036727	Mycobacterium ulcerans Agy99	4549818
YP_907963.1	CDS	icl	NC_008611.1	5037035	5038321	D	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; involved in glyoxylate bypass (at the first step), an alternative to the tricarboxylic acid cycle (in bacteria, plants, and fungi) [catalytic activity: isocitrate = succinate + glyoxylate] involved in the persistence in the host.; isocitrate lyase Icl	5037035..5038321	Mycobacterium ulcerans Agy99	4549819
YP_907964.1	CDS	fadB2	NC_008611.1	5038485	5039351	D	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase	5038485..5039351	Mycobacterium ulcerans Agy99	4549820
YP_907965.1	CDS	umaA	NC_008611.1	5039487	5040347	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; involved in mycolic acid modification or synthesis.; mycolic acid synthase UmaA	5039487..5040347	Mycobacterium ulcerans Agy99	4549821
YP_907966.1	CDS	pcaA	NC_008611.1	5040579	5041442	R	cytoplasmic protein; involved in the mycolic acid modification or synthesis; essential for the cyclopropanation function. required for cording and mycolic acid cyclopropane ring synthesis in the cell wall.; mycolic acid synthase PcaA	complement(5040579..5041442)	Mycobacterium ulcerans Agy99	4549822
YP_907967.1	CDS	MUL_4540	NC_008611.1	5041599	5042282	R	cytoplasmic protein; possibly involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(5041599..5042282)	Mycobacterium ulcerans Agy99	4549823
YP_907968.1	CDS	MUL_4541	NC_008611.1	5042417	5043778	D	membrane protein; transmembrane protein	5042417..5043778	Mycobacterium ulcerans Agy99	4549824
YP_907969.1	CDS	MUL_4542	NC_008611.1	5043864	5044280	D	cytoplasmic protein; possibly involved in transcriptional mechanism.; transcriptional regulatory protein	5043864..5044280	Mycobacterium ulcerans Agy99	4549825
YP_907970.1	CDS	hbhA	NC_008611.1	5044620	5045240	D	Also detected in the cytoplasmic fraction y proteomics; membrane protein; required for extrapulmonary dissemination. mediates adherence to epithelial cells by binding to sulfated glycoconjugates present at the surface of these cells; binds heparin, dextran sulfate, fucoidan and chondroitin sulfate. promotes hemagglutination of erythrocytes of certain host species. induces mycobacterial aggregation.; iron-regulated heparin binding hemagglutinin HbhA	5044620..5045240	Mycobacterium ulcerans Agy99	4549826
YP_907971.1	CDS	MUL_4544	NC_008611.1	5045393	5045680	D	membrane protein; transmembrane protein	5045393..5045680	Mycobacterium ulcerans Agy99	4549827
YP_907972.1	CDS	MUL_4545	NC_008611.1	5045685	5046167	D	secreted protein; hypothetical protein	5045685..5046167	Mycobacterium ulcerans Agy99	4549828
YP_907973.1	CDS	deoC	NC_008611.1	5046167	5046847	D	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase	5046167..5046847	Mycobacterium ulcerans Agy99	4554000
YP_907974.1	CDS	MUL_4547	NC_008611.1	5046866	5047756	R	Mutation has removed potential u/s start codon; Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(5046866..5047756)	Mycobacterium ulcerans Agy99	4554001
YP_907975.1	CDS	MUL_4548	NC_008611.1	5047909	5048751	R	cytoplasmic protein; function unknown, hydrolytic enzyme probably involved in cellular metabolism.; amidohydrolase	complement(5047909..5048751)	Mycobacterium ulcerans Agy99	4554002
YP_907976.1	CDS	MUL_4551	NC_008611.1	5050453	5050977	R	cytoplasmic protein; hypothetical protein	complement(5050453..5050977)	Mycobacterium ulcerans Agy99	4554004
YP_907977.1	CDS	murB	NC_008611.1	5051004	5052104	D	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase	5051004..5052104	Mycobacterium ulcerans Agy99	4554005
YP_907978.1	CDS	lprQ	NC_008611.1	5052114	5053529	D	membrane protein; lipoprotein LprQ	5052114..5053529	Mycobacterium ulcerans Agy99	4554006
YP_907979.1	CDS	MUL_4554	NC_008611.1	5053513	5054265	R	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short-chain type oxidoreductase	complement(5053513..5054265)	Mycobacterium ulcerans Agy99	4554007
YP_907980.1	CDS	MUL_4555	NC_008611.1	5054508	5055743	D	cytoplasmic protein; possibly involved in transcriptional mechanism.; transcriptional regulatory protein	5054508..5055743	Mycobacterium ulcerans Agy99	4554008
YP_907981.1	CDS	MUL_4556	NC_008611.1	5055764	5057155	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS; cytoplasmic protein; thought to be involved in polyprenolmannose synthesis.; mannosyltransferase	5055764..5057155	Mycobacterium ulcerans Agy99	4554009
YP_907982.1	CDS	MUL_4557	NC_008611.1	5057152	5057703	D	cytoplasmic protein; hypothetical protein	5057152..5057703	Mycobacterium ulcerans Agy99	4554010
YP_907983.1	CDS	gpmA	NC_008611.1	5057717	5058472	D	2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase	5057717..5058472	Mycobacterium ulcerans Agy99	4554011
YP_907984.1	CDS	senX3	NC_008611.1	5058614	5059834	D	membrane protein; sensor part of a two component regulatory system. probably forms part of a two-component regulatory system SenX3/RegX3; phosphorylates RegX3.; two component sensor histidine kinase SenX3	5058614..5059834	Mycobacterium ulcerans Agy99	4554012
YP_907985.1	CDS	regX3	NC_008611.1	5059884	5060567	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; transcriptional regulatory protein part of the two component regulatory system RegX3/SenX3.; two component sensory transduction protein RegX3	5059884..5060567	Mycobacterium ulcerans Agy99	4554013
YP_907986.1	CDS	MUL_4561	NC_008611.1	5060530	5062431	R	membrane protein; function unknown, probably involved in cellular metabolism.; oxidoreductase GMC-type	complement(5060530..5062431)	Mycobacterium ulcerans Agy99	4554014
YP_907987.1	CDS	MUL_4562	NC_008611.1	5062428	5062769	R	membrane protein; hypothetical protein	complement(5062428..5062769)	Mycobacterium ulcerans Agy99	4554015
YP_907988.1	CDS	MUL_4564	NC_008611.1	5063860	5064597	D	cytoplasmic protein; involved in transcriptional mechanism.; GntR family transcriptional regulator	5063860..5064597	Mycobacterium ulcerans Agy99	4551451
YP_907989.1	CDS	MUL_4565	NC_008611.1	5064610	5065404	R	cytoplasmic protein; hypothetical protein	complement(5064610..5065404)	Mycobacterium ulcerans Agy99	4551452
YP_907990.1	CDS	MUL_4566	NC_008611.1	5065544	5066578	D	cytoplasmic protein; hypothetical protein	5065544..5066578	Mycobacterium ulcerans Agy99	4551453
YP_907991.1	CDS	MUL_4567	NC_008611.1	5066575	5067639	D	Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; transmembrane protein	5066575..5067639	Mycobacterium ulcerans Agy99	4551454
YP_907992.1	CDS	MUL_4568	NC_008611.1	5067656	5068498	D	cytoplasmic protein; hypothetical protein	5067656..5068498	Mycobacterium ulcerans Agy99	4551455
YP_907993.1	CDS	MUL_4569	NC_008611.1	5068500	5069345	D	cytoplasmic protein; hypothetical protein	5068500..5069345	Mycobacterium ulcerans Agy99	4551456
YP_907994.1	CDS	proC	NC_008611.1	5069370	5070254	D	catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase	5069370..5070254	Mycobacterium ulcerans Agy99	4551457
YP_907995.1	CDS	MUL_4571	NC_008611.1	5070396	5070653	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; hypothetical protein	5070396..5070653	Mycobacterium ulcerans Agy99	4551458
YP_907996.1	CDS	MUL_4572	NC_008611.1	5070792	5070893	D	cytoplasmic protein; hypothetical protein	5070792..5070893	Mycobacterium ulcerans Agy99	4551459
YP_907997.1	CDS	galE2	NC_008611.1	5070972	5072105	D	cytoplasmic protein; involved in galactose metabolism [catalytic activity: UDP-glucose = UDP-galactose]; UDP-glucose 4-epimerase GalE2	5070972..5072105	Mycobacterium ulcerans Agy99	4551460
YP_907998.1	CDS	MUL_4574	NC_008611.1	5072087	5073178	D	Detected in the secreted fraction by proteomics.; cytoplasmic protein; hypothetical protein	5072087..5073178	Mycobacterium ulcerans Agy99	4551461
YP_907999.1	CDS	cmaA2	NC_008611.1	5073232	5074143	R	cytoplasmic protein; essential for the cyclopropanation function. transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge. mycolic acids, which represent the major constituent of mycobacterial cell wall complex, act as substrates [catalytic activity: S-adenosyl-L-methionine + phospholipid olefinic fatty acid = S-adenosyl-L- homocysteine + phospholipid cyclopropane fatty acid]; cyclopropane-fatty-acyl-phospholipid synthase 2 CmaA2	complement(5073232..5074143)	Mycobacterium ulcerans Agy99	4551462
YP_908000.1	CDS	MUL_4576	NC_008611.1	5074166	5074666	R	cytoplasmic protein; hypothetical protein	complement(5074166..5074666)	Mycobacterium ulcerans Agy99	4551463
YP_908001.1	CDS	serB1	NC_008611.1	5074711	5075622	R	Detected in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; removes a phosphate from phosphoserine [catalytic activity: phosphoserine + H2O = serine + phosphate]; phosphoserine phosphatase SerB1	complement(5074711..5075622)	Mycobacterium ulcerans Agy99	4551464
YP_908002.1	CDS	coxS_1	NC_008611.1	5075810	5076412	D	cytoplasmic protein; involved in cellular metabolism [catalytic activity: CO + H(2)O + acceptor = CO(2) + reduced acceptor]; carbon monoxyde dehydrogenase small chain CoxS	5075810..5076412	Mycobacterium ulcerans Agy99	4551465
YP_908003.1	CDS	coxM_1	NC_008611.1	5076416	5077393	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism [catalytic activity: CO + H(2)O + acceptor = CO(2) + reduced acceptor]; carbon monoxyde dehydrogenase medium chain CoxM	5076416..5077393	Mycobacterium ulcerans Agy99	4551466
YP_908004.1	CDS	coxL_1	NC_008611.1	5077390	5079567	D	membrane protein; involved in cellular metabolism [catalytic activity: CO + H(2)O + acceptor = CO(2) + reduced acceptor]; carbon monoxyde dehydrogenase large chain CoxL	5077390..5079567	Mycobacterium ulcerans Agy99	4551467
YP_908005.1	CDS	MUL_4581	NC_008611.1	5079607	5081247	R	membrane protein; PE-PGRS family protein	complement(5079607..5081247)	Mycobacterium ulcerans Agy99	4551468
YP_908006.1	CDS	MUL_4582	NC_008611.1	5081588	5082634	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	5081588..5082634	Mycobacterium ulcerans Agy99	4553067
YP_908007.1	CDS	MUL_4584	NC_008611.1	5082945	5084279	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	5082945..5084279	Mycobacterium ulcerans Agy99	4553069
YP_908008.1	CDS	MUL_4585	NC_008611.1	5084584	5085630	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5084584..5085630)	Mycobacterium ulcerans Agy99	4553070
YP_908009.1	CDS	MUL_4586	NC_008611.1	5086047	5087390	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	5086047..5087390	Mycobacterium ulcerans Agy99	4553071
YP_908010.1	CDS	MUL_4587	NC_008611.1	5087447	5088493	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5087447..5088493)	Mycobacterium ulcerans Agy99	4553072
YP_908011.1	CDS	MUL_4589	NC_008611.1	5089459	5090505	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5089459..5090505)	Mycobacterium ulcerans Agy99	4553074
YP_908012.1	CDS	MUL_4590	NC_008611.1	5090934	5091221	D	cytoplasmic protein; hypothetical protein	5090934..5091221	Mycobacterium ulcerans Agy99	4553075
YP_908013.1	CDS	MUL_4591	NC_008611.1	5091355	5091669	D	cytoplasmic protein; hypothetical protein	5091355..5091669	Mycobacterium ulcerans Agy99	4553076
YP_908014.1	CDS	MUL_4592	NC_008611.1	5091788	5092387	D	cytoplasmic protein; hypothetical protein	5091788..5092387	Mycobacterium ulcerans Agy99	4553077
YP_908015.1	CDS	MUL_4594	NC_008611.1	5094418	5095200	R	cytoplasmic protein; hypothetical protein	complement(5094418..5095200)	Mycobacterium ulcerans Agy99	4554528
YP_908016.1	CDS	MUL_4595	NC_008611.1	5095580	5096626	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5095580..5096626)	Mycobacterium ulcerans Agy99	4554529
YP_908017.1	CDS	MUL_4597	NC_008611.1	5097918	5098187	D	cytoplasmic protein; hypothetical protein	5097918..5098187	Mycobacterium ulcerans Agy99	4554531
YP_908018.1	CDS	hemA	NC_008611.1	5098297	5099718	D	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase	5098297..5099718	Mycobacterium ulcerans Agy99	4554532
YP_908019.1	CDS	hemC	NC_008611.1	5099732	5100676	D	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase	5099732..5100676	Mycobacterium ulcerans Agy99	4554533
YP_908020.1	CDS	hemD	NC_008611.1	5100701	5102374	D	cytoplasmic protein; possibly involved in the biosynthesis of siroheme and cobalamin [catalytic activity: 2 S-adenosyl-L- methionine + uroporphyrin III = 2 S-adenosyl-L- homocysteine + sirohydrochlorin]; uroporphyrin-III C-methyltransferase HemD	5100701..5102374	Mycobacterium ulcerans Agy99	4554534
YP_908021.1	CDS	hemB	NC_008611.1	5102414	5103397	D	catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase	5102414..5103397	Mycobacterium ulcerans Agy99	4554535
YP_908022.1	CDS	MUL_4602	NC_008611.1	5103409	5103945	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	5103409..5103945	Mycobacterium ulcerans Agy99	4554536
YP_908023.1	CDS	MUL_4603	NC_008611.1	5103942	5104226	D	membrane protein; transmembrane protein	5103942..5104226	Mycobacterium ulcerans Agy99	4554537
YP_908024.1	CDS	MUL_4605	NC_008611.1	5104448	5104561	R	hypothetical protein	complement(5104448..5104561)	Mycobacterium ulcerans Agy99	4554538
YP_908025.1	CDS	MUL_4606	NC_008611.1	5104688	5106022	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	5104688..5106022	Mycobacterium ulcerans Agy99	4554539
YP_908026.1	CDS	MUL_4607	NC_008611.1	5106413	5107459	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	5106413..5107459	Mycobacterium ulcerans Agy99	4554540
YP_908027.1	CDS	MUL_4611	NC_008611.1	5112123	5113169	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	5112123..5113169	Mycobacterium ulcerans Agy99	4552220
YP_908028.1	CDS	MUL_4612	NC_008611.1	5113285	5113521	R	membrane protein; hypothetical protein	complement(5113285..5113521)	Mycobacterium ulcerans Agy99	4552221
YP_908029.1	CDS	MUL_4613	NC_008611.1	5113790	5115124	D	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	5113790..5115124	Mycobacterium ulcerans Agy99	4552222
YP_908030.1	CDS	MUL_4614	NC_008611.1	5115515	5116561	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	5115515..5116561	Mycobacterium ulcerans Agy99	4552223
YP_908031.1	CDS	MUL_4615	NC_008611.1	5116647	5117168	D	membrane protein; hypothetical protein	5116647..5117168	Mycobacterium ulcerans Agy99	4552224
YP_908032.1	CDS	MUL_4616	NC_008611.1	5117335	5118039	D	membrane protein; hypothetical protein	5117335..5118039	Mycobacterium ulcerans Agy99	4552225
YP_908033.1	CDS	MUL_4617	NC_008611.1	5118178	5119707	R	membrane protein; hypothetical protein	complement(5118178..5119707)	Mycobacterium ulcerans Agy99	4552226
YP_908034.1	CDS	MUL_4620	NC_008611.1	5120301	5121125	D	PE8; membrane protein; PE family protein	5120301..5121125	Mycobacterium ulcerans Agy99	4552228
YP_908035.1	CDS	MUL_4621	NC_008611.1	5121195	5122367	D	PPE15; membrane protein; PPE family protein	5121195..5122367	Mycobacterium ulcerans Agy99	4552229
YP_908036.1	CDS	esxP	NC_008611.1	5122515	5122811	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; EsaT-6 like protein EsxP	5122515..5122811	Mycobacterium ulcerans Agy99	4552230
YP_908037.1	CDS	esxN_2	NC_008611.1	5122850	5123134	D	Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; EsaT-6 like protein EsxN_2	5122850..5123134	Mycobacterium ulcerans Agy99	4552231
YP_908038.1	CDS	trcR	NC_008611.1	5123395	5124168	D	cytoplasmic protein; sensor part of the two component regulatory system TrcS/TrcR. involved in transcriptional autoactivation: TrcR activates its own expression by interacting with the AT-rich sequence of the TrcR promoter.; two component transcriptional regulator TrcR	5123395..5124168	Mycobacterium ulcerans Agy99	4552232
YP_908039.1	CDS	trcS	NC_008611.1	5124218	5125720	D	membrane protein; sensor part of the two component regulatory system TrcS/TrcR.; two component sensor histidine kinase TrcS	5124218..5125720	Mycobacterium ulcerans Agy99	4552233
YP_908040.1	CDS	MUL_4626	NC_008611.1	5125800	5126498	D	cytoplasmic protein; function unknown, possibly involved in amino acid transport and metabolism.; hydantoin racemase	5125800..5126498	Mycobacterium ulcerans Agy99	4552234
YP_908041.1	CDS	MUL_4627	NC_008611.1	5126585	5126878	R	cytoplasmic protein; hypothetical protein	complement(5126585..5126878)	Mycobacterium ulcerans Agy99	4552235
YP_908042.1	CDS	MUL_4628	NC_008611.1	5126982	5127884	R	cytoplasmic protein; function unknown; identity to GppA, exopolyphosphatase [nucleotide transport and metabolism / inorganic ion transport and metabolism]; hypothetical protein	complement(5126982..5127884)	Mycobacterium ulcerans Agy99	4550799
YP_908043.1	CDS	MUL_4629	NC_008611.1	5127945	5128436	R	cytoplasmic protein; hypothetical protein	complement(5127945..5128436)	Mycobacterium ulcerans Agy99	4550800
YP_908044.1	CDS	MUL_4630	NC_008611.1	5128429	5129130	R	membrane protein; hypothetical protein	complement(5128429..5129130)	Mycobacterium ulcerans Agy99	4550801
YP_908045.1	CDS	eno	NC_008611.1	5129164	5130450	R	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase	complement(5129164..5130450)	Mycobacterium ulcerans Agy99	4550802
YP_908046.1	CDS	lpqU	NC_008611.1	5130531	5131262	R	secreted protein; lipoprotein LpqU	complement(5130531..5131262)	Mycobacterium ulcerans Agy99	4550803
YP_908047.1	CDS	MUL_4633	NC_008611.1	5131617	5132717	R	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase	complement(5131617..5132717)	Mycobacterium ulcerans Agy99	4550804
YP_908048.1	CDS	mfd	NC_008611.1	5132714	5136382	R	cytoplasmic protein; involved in nucleotide excision repair. necessary for strand-specific repair. a lesion in the template strand blocks the RNA polymerase complex (RNAP) the RNAP- DNA-RNA complex is specifically recognized by TrcF which releases RNAP and the truncated transcript; the TcrF may replace RNAP at the lesion site and then recruit the UvrA/B/C repair system.; transcription-repair coupling factor Mfd (TrcF)	complement(5132714..5136382)	Mycobacterium ulcerans Agy99	4550805
YP_908049.1	CDS	MUL_4635	NC_008611.1	5136449	5137042	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(5136449..5137042)	Mycobacterium ulcerans Agy99	4550806
YP_908050.1	CDS	glmU	NC_008611.1	5137519	5138997	D	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	5137519..5138997	Mycobacterium ulcerans Agy99	4550808
YP_908051.1	CDS	prsA	NC_008611.1	5139110	5140090	D	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase	5139110..5140090	Mycobacterium ulcerans Agy99	4550809
YP_908052.1	CDS	MUL_4639	NC_008611.1	5140091	5140459	D	cytoplasmic protein; arsenate reductase	5140091..5140459	Mycobacterium ulcerans Agy99	4550810
YP_908053.1	CDS	lpqT	NC_008611.1	5140456	5141112	D	Also detected in the membrane fraction by proteomics (LC-MS/MS); secreted protein; lipoprotein LpqT	5140456..5141112	Mycobacterium ulcerans Agy99	4550811
YP_908054.1	CDS	MUL_4642	NC_008611.1	5141854	5142900	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5141854..5142900)	Mycobacterium ulcerans Agy99	4550813
YP_908055.1	CDS	rplY	NC_008611.1	5143598	5144242	D	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc	5143598..5144242	Mycobacterium ulcerans Agy99	4550814
YP_908056.1	CDS	pth	NC_008611.1	5144255	5144830	D	Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase	5144255..5144830	Mycobacterium ulcerans Agy99	4550815
YP_908057.1	CDS	MUL_4645	NC_008611.1	5144844	5145758	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(5144844..5145758)	Mycobacterium ulcerans Agy99	4554492
YP_908058.1	CDS	pks16	NC_008611.1	5147613	5149247	R	activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase	complement(5147613..5149247)	Mycobacterium ulcerans Agy99	4554494
YP_908059.1	CDS	ispE	NC_008611.1	5149613	5150536	R	catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	complement(5149613..5150536)	Mycobacterium ulcerans Agy99	4554495
YP_908060.1	CDS	ksgA	NC_008611.1	5150634	5151458	R	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase	complement(5150634..5151458)	Mycobacterium ulcerans Agy99	4554496
YP_908061.1	CDS	rpfB	NC_008611.1	5151563	5152651	R	secreted protein; thought to promote the resuscitation and growth of dormant, nongrowing cell. could also stimulates the growth of several other high G+C Gram+ organisms, E.G. mycobacterium avium, mycobacterium bovis (BCG), mycobacterium kansasii, mycobacterium smegmatis.; resuscitation-promoting factor RpfB	complement(5151563..5152651)	Mycobacterium ulcerans Agy99	4554497
YP_908062.1	CDS	tatD	NC_008611.1	5152861	5153643	R	membrane protein; DNAse involved in proteins export. this sec- independent pathway is termed tat for twin-arginine translocation system. this system mainly transports proteins with bound cofactors that require folding prior to export (by similarity); deoxyribonuclease TatD	complement(5152861..5153643)	Mycobacterium ulcerans Agy99	4554498
YP_908063.1	CDS	metS	NC_008611.1	5153743	5155299	D	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase	5153743..5155299	Mycobacterium ulcerans Agy99	4554499
YP_908064.1	CDS	cysE_1	NC_008611.1	5155583	5156149	D	cytoplasmic protein; involved in cysteine biosynthesis [catalytic activity: acetyl-CoA + L-serine = CoA + O-acetyl-L- serine]; serine acetyltransferase CysE	5155583..5156149	Mycobacterium ulcerans Agy99	4554500
YP_908065.1	CDS	MUL_4658	NC_008611.1	5158419	5159603	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; dehydrogenase	5158419..5159603	Mycobacterium ulcerans Agy99	4554502
YP_908066.1	CDS	pabD	NC_008611.1	5160569	5161882	D	catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase component I	5160569..5161882	Mycobacterium ulcerans Agy99	4554504
YP_908067.1	CDS	MUL_4662	NC_008611.1	5163343	5164197	R	cytoplasmic protein; hypothetical protein	complement(5163343..5164197)	Mycobacterium ulcerans Agy99	4554506
YP_908068.1	CDS	MUL_4663	NC_008611.1	5164196	5165779	D	membrane protein; hypothetical protein	5164196..5165779	Mycobacterium ulcerans Agy99	4554507
YP_908069.1	CDS	arcA	NC_008611.1	5165776	5166984	R	catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase	complement(5165776..5166984)	Mycobacterium ulcerans Agy99	4554508
YP_908070.1	CDS	MUL_4665	NC_008611.1	5167043	5167660	D	cytoplasmic protein; hypothetical protein	5167043..5167660	Mycobacterium ulcerans Agy99	4551204
YP_908071.1	CDS	MUL_4666	NC_008611.1	5167686	5168339	R	secreted protein; hypothetical protein	complement(5167686..5168339)	Mycobacterium ulcerans Agy99	4551205
YP_908072.1	CDS	MUL_5094	NC_008611.1	5168367	5169044	R	secreted protein; hypothetical protein	complement(5168367..5169044)	Mycobacterium ulcerans Agy99	4551206
YP_908073.1	CDS	MUL_4667	NC_008611.1	5169116	5170117	R	cytoplasmic protein; hypothetical protein	complement(5169116..5170117)	Mycobacterium ulcerans Agy99	4551207
YP_908074.1	CDS	MUL_4668	NC_008611.1	5170282	5171028	D	cytoplasmic protein; thought to cause methylation.; methyltransferase	5170282..5171028	Mycobacterium ulcerans Agy99	4551208
YP_908075.1	CDS	MUL_4669	NC_008611.1	5171064	5171315	R	cytoplasmic protein; hypothetical protein	complement(5171064..5171315)	Mycobacterium ulcerans Agy99	4551209
YP_908076.1	CDS	MUL_4670	NC_008611.1	5171430	5172167	R	membrane protein; hypothetical protein	complement(5171430..5172167)	Mycobacterium ulcerans Agy99	4551210
YP_908077.1	CDS	MUL_4671	NC_008611.1	5172293	5172829	D	membrane protein; hypothetical protein	5172293..5172829	Mycobacterium ulcerans Agy99	4551211
YP_908078.1	CDS	MUL_4672	NC_008611.1	5173146	5174318	D	membrane protein; PPE family protein	5173146..5174318	Mycobacterium ulcerans Agy99	4551212
YP_908079.1	CDS	MUL_4673	NC_008611.1	5174543	5175373	D	cytoplasmic protein; function unknown, possibly involved in cell envelope biogenesis, outer membrane; teichoic acid biosynthesis protein	5174543..5175373	Mycobacterium ulcerans Agy99	4551213
YP_908080.1	CDS	MUL_4674	NC_008611.1	5175390	5176895	D	membrane protein; function unknown, possibly involved in lipopolysaccharide synthesis.; hypothetical protein	5175390..5176895	Mycobacterium ulcerans Agy99	4551214
YP_908081.1	CDS	MUL_4675	NC_008611.1	5176910	5178385	D	membrane protein; function unknown, possible membrane protein involved in the export of O-antigen and teichoic acid.; hypothetical protein	5176910..5178385	Mycobacterium ulcerans Agy99	4551215
YP_908082.1	CDS	MUL_4676	NC_008611.1	5178382	5180373	D	cytoplasmic protein; probably involved in cell wall synthesis; glycosyltransferase	5178382..5180373	Mycobacterium ulcerans Agy99	4551216
YP_908083.1	CDS	MUL_4677	NC_008611.1	5180370	5181425	D	cytoplasmic protein; function unknown, contains RfaG, glycosyltransferase domain. may be involved in cell envelope biogenesis, outer membrane.; hypothetical protein	5180370..5181425	Mycobacterium ulcerans Agy99	4551217
YP_908084.1	CDS	MUL_4678	NC_008611.1	5181440	5182390	R	cytoplasmic protein; hypothetical protein	complement(5181440..5182390)	Mycobacterium ulcerans Agy99	4551218
YP_908085.1	CDS	MUL_4679	NC_008611.1	5182443	5184404	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(5182443..5184404)	Mycobacterium ulcerans Agy99	4551219
YP_908086.1	CDS	MUL_4680	NC_008611.1	5184841	5185800	D	cytoplasmic protein; hypothetical protein	5184841..5185800	Mycobacterium ulcerans Agy99	4551220
YP_908087.1	CDS	MUL_4681	NC_008611.1	5185780	5186577	R	cytoplasmic protein; hypothetical protein	complement(5185780..5186577)	Mycobacterium ulcerans Agy99	4551221
YP_908088.1	CDS	MUL_4682	NC_008611.1	5186678	5187343	R	cytoplasmic protein; hypothetical protein	complement(5186678..5187343)	Mycobacterium ulcerans Agy99	4551222
YP_908089.1	CDS	MUL_4683	NC_008611.1	5187502	5188161	D	cytoplasmic protein; function unknown; hydrolytic enzyme probably involved in cellular metabolism.; amidohydrolase	5187502..5188161	Mycobacterium ulcerans Agy99	4554370
YP_908090.1	CDS	MUL_4684	NC_008611.1	5188238	5188999	R	cytoplasmic protein; hypothetical protein	complement(5188238..5188999)	Mycobacterium ulcerans Agy99	4554371
YP_908091.1	CDS	MUL_4686	NC_008611.1	5190210	5191685	R	membrane protein; hypothetical protein	complement(5190210..5191685)	Mycobacterium ulcerans Agy99	4554373
YP_908092.1	CDS	MUL_4688	NC_008611.1	5193402	5194184	D	cytoplasmic protein; hypothetical protein	5193402..5194184	Mycobacterium ulcerans Agy99	4554375
YP_908093.1	CDS	MUL_4690	NC_008611.1	5194419	5195597	R	membrane protein; hypothetical protein	complement(5194419..5195597)	Mycobacterium ulcerans Agy99	4554377
YP_908094.1	CDS	rimJ	NC_008611.1	5195805	5196416	R	cytoplasmic protein; this enzyme acetylates the N-terminal alanine of ribosomal protein S5 [catalytic activity: acetyl-CoA + ribosomal-protein L-alanine = CoA + ribosomal-protein N- acetyl-L-alanine]; ribosomal-protein-alanine acetyltransferase RimJ	complement(5195805..5196416)	Mycobacterium ulcerans Agy99	4554378
YP_908095.1	CDS	moeA1	NC_008611.1	5196481	5197770	R	cytoplasmic protein; involved in molybdenum cofactor biosynthesis: involved in the biosynthesis of a demolybdo-cofactor (molybdopterin), necessary for molybdo-enzymes.; molybdopterin biosynthesis protein MoeA1	complement(5196481..5197770)	Mycobacterium ulcerans Agy99	4554379
YP_908096.1	CDS	galU	NC_008611.1	5197822	5198739	R	cytoplasmic protein; may play a role in stationary phase survival [catalytic activity: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose]; UTP--glucose-1-phosphate uridylyltransferase GalU	complement(5197822..5198739)	Mycobacterium ulcerans Agy99	4554380
YP_908097.1	CDS	MUL_4694	NC_008611.1	5198817	5199410	D	cytoplasmic protein; hypothetical protein	5198817..5199410	Mycobacterium ulcerans Agy99	4554381
YP_908098.1	CDS	MUL_4695	NC_008611.1	5199485	5199820	D	cytoplasmic protein; putative serine rich protein	5199485..5199820	Mycobacterium ulcerans Agy99	4554382
YP_908099.1	CDS	MUL_4696	NC_008611.1	5199887	5200561	D	membrane protein; hypothetical protein	5199887..5200561	Mycobacterium ulcerans Agy99	4554383
YP_908100.1	CDS	mscL	NC_008611.1	5200638	5201093	D	forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel	5200638..5201093	Mycobacterium ulcerans Agy99	4554384
YP_908101.1	CDS	moaB2	NC_008611.1	5201113	5201658	R	Detected in the cytoplasmic and secreted fractions by proteomics.; cytoplasmic protein; thought to be involved in molybdopterin biosynthesis. catalyzes the dehydratation of 4A- hydroxytetrahydropterins [catalytic activity: (6R)-6-(L- erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro -4 A- hydroxypterin = (6R)-6-(L-erythro-1,2- dihydroxypropyl)- 7,8-dihydro-6H-pterin + H(2)O]; pterin-4-alpha-carbinolamine dehydratase MoaB2	complement(5201113..5201658)	Mycobacterium ulcerans Agy99	4554385
YP_908102.1	CDS	pepD	NC_008611.1	5201655	5203094	R	Non-secretory protein; membrane protein; function unknown, possibly hydrolyzes peptides and/or proteins (seems to cleave preferentially after serine residues); serine protease PepD	complement(5201655..5203094)	Mycobacterium ulcerans Agy99	4554386
YP_908103.1	CDS	mprB	NC_008611.1	5203195	5204730	R	membrane protein; sensor part of a two component regulatory system (supposed MprAB system); two component sensor kinase MprB	complement(5203195..5204730)	Mycobacterium ulcerans Agy99	4554387
YP_908104.1	CDS	mprA	NC_008611.1	5204730	5205428	R	cytoplasmic protein; regulator part of a two component regulatory system (supposed MprAB system); two component response transcriptional regulatory protein MprA	complement(5204730..5205428)	Mycobacterium ulcerans Agy99	4554298
YP_908105.1	CDS	rpmF	NC_008611.1	5205695	5205868	R	some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32	complement(5205695..5205868)	Mycobacterium ulcerans Agy99	4554299
YP_908106.1	CDS	MUL_4703	NC_008611.1	5206134	5207846	D	cytoplasmic protein; hypothetical protein	5206134..5207846	Mycobacterium ulcerans Agy99	4554300
YP_908107.1	CDS	fadE13	NC_008611.1	5207843	5208991	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE13	5207843..5208991	Mycobacterium ulcerans Agy99	4554301
YP_908108.1	CDS	accD2	NC_008611.1	5209035	5210636	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in fatty acid metabolism.; acetyl-/propionyl-CoA carboxylase subunit beta	5209035..5210636	Mycobacterium ulcerans Agy99	4554302
YP_908109.1	CDS	accA2	NC_008611.1	5210642	5212624	D	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; this protein carries two functions: biotin carboxyl carrier protein and biotin carboxyltransferase. involved in the first step of long-chain fatty acid synthesis [catalytic activity: ATP + biotin-carboxyl-carrier protein + CO(2) = ADP + phosphate + carboxybiotin-carboxyl-carrier protein]; acetyl-/propionyl-coenzyme a carboxylase alpha chain, AccA2	5210642..5212624	Mycobacterium ulcerans Agy99	4554303
YP_908110.1	CDS	fadE12	NC_008611.1	5212621	5213790	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, but involved in lipid metabolism.; acyl-CoA dehydrogenase FadE12	5212621..5213790	Mycobacterium ulcerans Agy99	4554304
YP_908111.1	CDS	echA7	NC_008611.1	5213801	5214574	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	5213801..5214574	Mycobacterium ulcerans Agy99	4554305
YP_908112.1	CDS	MUL_4709	NC_008611.1	5215037	5215639	D	cytoplasmic protein; hypothetical protein	5215037..5215639	Mycobacterium ulcerans Agy99	4554307
YP_908113.1	CDS	MUL_4710	NC_008611.1	5215667	5217664	R	cytoplasmic protein; hypothetical protein	complement(5215667..5217664)	Mycobacterium ulcerans Agy99	4554308
YP_908114.1	CDS	MUL_4711	NC_008611.1	5217657	5219051	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; chelation, introducing a magnesium ion into specific substrate.; magnesium chelatase	complement(5217657..5219051)	Mycobacterium ulcerans Agy99	4554309
YP_908115.1	CDS	purH	NC_008611.1	5219128	5220699	R	involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	complement(5219128..5220699)	Mycobacterium ulcerans Agy99	4554310
YP_908116.1	CDS	purN	NC_008611.1	5220696	5221343	R	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase	complement(5220696..5221343)	Mycobacterium ulcerans Agy99	4554311
YP_908117.1	CDS	MUL_4714	NC_008611.1	5221396	5222787	R	membrane protein; integral membrane protein	complement(5221396..5222787)	Mycobacterium ulcerans Agy99	4554312
YP_908118.1	CDS	MUL_4715	NC_008611.1	5222836	5223741	R	membrane protein; transmembrane protein	complement(5222836..5223741)	Mycobacterium ulcerans Agy99	4554313
YP_908119.1	CDS	MUL_4717	NC_008611.1	5224819	5226339	R	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	complement(5224819..5226339)	Mycobacterium ulcerans Agy99	4554315
YP_908120.1	CDS	sucD	NC_008611.1	5227878	5228780	R	Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha	complement(5227878..5228780)	Mycobacterium ulcerans Agy99	4551289
YP_908121.1	CDS	sucC	NC_008611.1	5228796	5229959	R	catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta	complement(5228796..5229959)	Mycobacterium ulcerans Agy99	4551290
YP_908122.1	CDS	MUL_4721	NC_008611.1	5230235	5231293	D	cytoplasmic protein; hypothetical protein	5230235..5231293	Mycobacterium ulcerans Agy99	4551291
YP_908123.1	CDS	MUL_4722	NC_008611.1	5231297	5231881	D	membrane protein; hypothetical protein	5231297..5231881	Mycobacterium ulcerans Agy99	4551292
YP_908124.1	CDS	uvrD1	NC_008611.1	5231960	5234269	R	cytoplasmic protein; involved in nucleotide excision repair. has a 3'-5' helicase activity in presence of ATP. preferred substrate being one with both single and double stranded regions of DNA.; ATP-dependent DNA helicase II UvrD1	complement(5231960..5234269)	Mycobacterium ulcerans Agy99	4551293
YP_908125.1	CDS	MUL_4725	NC_008611.1	5234751	5235809	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5234751..5235809)	Mycobacterium ulcerans Agy99	4551295
YP_908126.1	CDS	MUL_4727	NC_008611.1	5237281	5238615	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(5237281..5238615)	Mycobacterium ulcerans Agy99	4551297
YP_908127.1	CDS	MUL_4729	NC_008611.1	5238926	5239972	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5238926..5239972)	Mycobacterium ulcerans Agy99	4551299
YP_908128.1	CDS	MUL_4731	NC_008611.1	5240872	5241495	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(5240872..5241495)	Mycobacterium ulcerans Agy99	4551300
YP_908129.1	CDS	MUL_4732	NC_008611.1	5241471	5241788	D	fragment; cytoplasmic protein; hypothetical protein	5241471..5241788	Mycobacterium ulcerans Agy99	4551301
YP_908130.1	CDS	pntB	NC_008611.1	5241831	5243255	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; the transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [catalytic activity: NADPH + NAD+ = NADP+ + NADH]; NAD(P) transhydrogenasePntB	complement(5241831..5243255)	Mycobacterium ulcerans Agy99	4551302
YP_908131.1	CDS	pntAb	NC_008611.1	5243252	5243590	R	membrane protein; the transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [catalytic activity: NADPH + NAD+ = NADP+ + NADH]; NAD(P) transhydrogenase (subunit alpha) PntAb	complement(5243252..5243590)	Mycobacterium ulcerans Agy99	4551303
YP_908132.1	CDS	pntAa	NC_008611.1	5243606	5244694	R	Detected in the cytoplasmic and secreted  fractions by 2D-LC-MS/MS.; cytoplasmic protein; the transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [catalytic activity: NADPH + NAD+ = NADP+ + NADH]; NAD(P) transhydrogenase PntA	complement(5243606..5244694)	Mycobacterium ulcerans Agy99	4551322
YP_908133.1	CDS	MUL_4736	NC_008611.1	5244938	5245408	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(5244938..5245408)	Mycobacterium ulcerans Agy99	4551323
YP_908134.1	CDS	MUL_4737	NC_008611.1	5245474	5246352	R	cytoplasmic protein; hypothetical protein	complement(5245474..5246352)	Mycobacterium ulcerans Agy99	4551324
YP_908135.1	CDS	ptpB	NC_008611.1	5247721	5248551	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in signal transduction (via dephosphorylation) can dephosphorylated in vitro the phosphotyrosine residue of myelin basic protein (MBP) at ph 7.0. could be involved in virulence by interfering with phosphotyrosine-mediated signals in macrophages [catalytic activity: protein tyrosine phosphate + H(2)O = protein tyrosine + phosphate]; phosphotyrosine protein phosphatase PtpB	5247721..5248551	Mycobacterium ulcerans Agy99	4551326
YP_908136.1	CDS	MUL_4741	NC_008611.1	5248870	5249256	D	cytoplasmic protein; hypothetical protein	5248870..5249256	Mycobacterium ulcerans Agy99	4551327
YP_908137.1	CDS	MUL_4742	NC_008611.1	5249304	5250032	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	complement(5249304..5250032)	Mycobacterium ulcerans Agy99	4551328
YP_908138.1	CDS	MUL_4744	NC_008611.1	5251308	5252186	D	predicted by Cello and psort. Detected in the secreted fraction by 2D-LC-MS-MS.; secreted protein; possibly hydrolyzes specific sugar (hydrolyzation of glycosidic bond) and could be involved in exopolysaccharide biosynthesis/degradation. could also have a lytic activity against cell walls.; beta-1,3-glucanase	5251308..5252186	Mycobacterium ulcerans Agy99	4551330
YP_908139.1	CDS	MUL_4746	NC_008611.1	5252601	5252918	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(5252601..5252918)	Mycobacterium ulcerans Agy99	4551332
YP_908140.1	CDS	MUL_4747	NC_008611.1	5252943	5253647	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(5252943..5253647)	Mycobacterium ulcerans Agy99	4551333
YP_908141.1	CDS	MUL_4749	NC_008611.1	5259211	5260257	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5259211..5260257)	Mycobacterium ulcerans Agy99	4551335
YP_908142.1	CDS	MUL_4751	NC_008611.1	5266112	5266429	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	complement(5266112..5266429)	Mycobacterium ulcerans Agy99	4551337
YP_908143.1	CDS	MUL_4752	NC_008611.1	5266454	5267158	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	complement(5266454..5267158)	Mycobacterium ulcerans Agy99	4550889
YP_908144.1	CDS	pknK_3	NC_008611.1	5267954	5270893	R	membrane protein; involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; serine/threonine-protein kinase transcriptional regulatory protein PknK_3	complement(5267954..5270893)	Mycobacterium ulcerans Agy99	4550890
YP_908145.1	CDS	pknK_2	NC_008611.1	5271118	5274102	R	membrane protein; involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites [catalytic activity: ATP + a protein = ADP + a phosphoprotein]; serine/threonine-protein kinase transcriptional regulatory protein PknK_2	complement(5271118..5274102)	Mycobacterium ulcerans Agy99	4550891
YP_908146.1	CDS	MUL_4755	NC_008611.1	5274163	5274381	R	cytoplasmic protein; hypothetical protein	complement(5274163..5274381)	Mycobacterium ulcerans Agy99	4550892
YP_908147.1	CDS	MUL_4756	NC_008611.1	5274750	5275286	D	membrane protein; hypothetical protein	5274750..5275286	Mycobacterium ulcerans Agy99	4550893
YP_908148.1	CDS	MUL_4757	NC_008611.1	5275312	5275668	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	5275312..5275668	Mycobacterium ulcerans Agy99	4550894
YP_908149.1	CDS	MUL_4758	NC_008611.1	5275750	5276718	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; possibly binds NADP and acts through a one-electron transfer process. quinones are supposed to be the best substrates. may act in the detoxification of xenobiotics [catalytic activity: NADPH + quinone = NADP+ + semiquinone]; quinone oxidoreductase	complement(5275750..5276718)	Mycobacterium ulcerans Agy99	4550895
YP_908150.1	CDS	MUL_4759	NC_008611.1	5276723	5277583	R	Found in the cytoplasmic and membrane fractions by LC-MS/MS. Also detected in the secreted protein and extracellular matrix fractions by proteomics.; cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short-chain type dehydrogenase/reductase	complement(5276723..5277583)	Mycobacterium ulcerans Agy99	4550896
YP_908151.1	CDS	MUL_4760	NC_008611.1	5277656	5279140	R	Detected in the membrane and the cytoplasmic fractions by proteomics.; cytoplasmic protein; function unknown, probably involved in cellular metabolism [catalytic activity: an aldehyde + NAD+ + H2O = an acid + NADH]; aldehyde dehydrogenase (NAD+) dependent	complement(5277656..5279140)	Mycobacterium ulcerans Agy99	4550897
YP_908152.1	CDS	MUL_4761	NC_008611.1	5279290	5280156	R	cytoplasmic protein; O-methyltransferase	complement(5279290..5280156)	Mycobacterium ulcerans Agy99	4550898
YP_908153.1	CDS	MUL_4762	NC_008611.1	5280226	5281158	R	cytoplasmic protein; O-methyltransferase	complement(5280226..5281158)	Mycobacterium ulcerans Agy99	4550899
YP_908154.1	CDS	MUL_4763	NC_008611.1	5281181	5282113	R	cytoplasmic protein; hypothetical protein	complement(5281181..5282113)	Mycobacterium ulcerans Agy99	4550900
YP_908155.1	CDS	MUL_4764	NC_008611.1	5282130	5282237	R	cytoplasmic protein; hypothetical protein	complement(5282130..5282237)	Mycobacterium ulcerans Agy99	4550901
YP_908156.1	CDS	MUL_4765	NC_008611.1	5282258	5282896	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(5282258..5282896)	Mycobacterium ulcerans Agy99	4550902
YP_908157.1	CDS	MUL_4766	NC_008611.1	5282893	5283897	R	Detected in the cytoplasmic fraction by proteomics.; cytoplasmic protein; hypothetical protein	complement(5282893..5283897)	Mycobacterium ulcerans Agy99	4550903
YP_908158.1	CDS	MUL_4769	NC_008611.1	5286515	5286916	D	cytoplasmic protein; hypothetical protein	5286515..5286916	Mycobacterium ulcerans Agy99	4550906
YP_908159.1	CDS	MUL_4770	NC_008611.1	5286903	5287283	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; hypothetical protein	complement(5286903..5287283)	Mycobacterium ulcerans Agy99	4550907
YP_908160.1	CDS	MUL_4771	NC_008611.1	5287393	5288415	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	complement(5287393..5288415)	Mycobacterium ulcerans Agy99	4550908
YP_908161.1	CDS	MUL_4772	NC_008611.1	5288412	5288918	R	cytoplasmic protein; hypothetical protein	complement(5288412..5288918)	Mycobacterium ulcerans Agy99	4550007
YP_908162.1	CDS	msrA	NC_008611.1	5289078	5289593	D	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A	5289078..5289593	Mycobacterium ulcerans Agy99	4550008
YP_908163.1	CDS	MUL_4775	NC_008611.1	5291084	5291689	D	cytoplasmic protein; could be involved in transcriptional mechanism.; transcriptional regulatory protein	5291084..5291689	Mycobacterium ulcerans Agy99	4550010
YP_908164.1	CDS	MUL_4776	NC_008611.1	5291735	5291947	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; hypothetical protein	5291735..5291947	Mycobacterium ulcerans Agy99	4550011
YP_908165.1	CDS	MUL_4777	NC_008611.1	5291954	5292997	D	cytoplasmic protein; oxido-reduction; zinc-dependent alcohol dehydrogenase	5291954..5292997	Mycobacterium ulcerans Agy99	4550012
YP_908166.1	CDS	ephF	NC_008611.1	5293061	5293951	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; thought to be involved in detoxification reactions following oxidative damage to lipids [catalytic activity: an epoxide + H(2)O = a glycol]; epoxide hydrolase EphF	complement(5293061..5293951)	Mycobacterium ulcerans Agy99	4550013
YP_908167.1	CDS	MUL_4780	NC_008611.1	5295261	5295860	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	5295261..5295860	Mycobacterium ulcerans Agy99	4550015
YP_908168.1	CDS	MUL_4781	NC_008611.1	5295857	5296966	D	cytoplasmic protein; hypothetical protein	5295857..5296966	Mycobacterium ulcerans Agy99	4550016
YP_908169.1	CDS	MUL_4782	NC_008611.1	5296968	5298017	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, probably involved in cellular metabolism.; coenzyme F420-dependent oxidoreductase	complement(5296968..5298017)	Mycobacterium ulcerans Agy99	4550017
YP_908170.1	CDS	MUL_4783	NC_008611.1	5298017	5298541	R	cytoplasmic protein; hypothetical protein	complement(5298017..5298541)	Mycobacterium ulcerans Agy99	4550018
YP_908171.1	CDS	desA3_2	NC_008611.1	5298811	5299944	R	membrane protein; thought to be involved in lipid metabolism [catalytic activity: linoleoyl-CoA + ah(2) + O(2) = gamma- linolenoyl-CoA + a + 2 H(2)O]; linoleoyl-CoA desaturase, DesA3_2	complement(5298811..5299944)	Mycobacterium ulcerans Agy99	4550019
YP_908172.1	CDS	MUL_4786	NC_008611.1	5299980	5301077	R	cytoplasmic protein; function unknown, contains flavodoxin reductases (ferredoxin-NADPH reductases) family 1 domain. [energy production and conversion]; flavodoxin oxidoreductase	complement(5299980..5301077)	Mycobacterium ulcerans Agy99	4550020
YP_908173.1	CDS	MUL_4787	NC_008611.1	5301148	5301816	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	5301148..5301816	Mycobacterium ulcerans Agy99	4550021
YP_908174.1	CDS	MUL_4789	NC_008611.1	5304070	5304618	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; acetyltransferase	complement(5304070..5304618)	Mycobacterium ulcerans Agy99	4550023
YP_908175.1	CDS	fadE1	NC_008611.1	5304780	5306072	D	Detected in the cytoplamic fraction by LC-MS/MS. Also detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE1	5304780..5306072	Mycobacterium ulcerans Agy99	4550024
YP_908176.1	CDS	MUL_4791	NC_008611.1	5306153	5306608	R	cytoplasmic protein; acyl dehydratase	complement(5306153..5306608)	Mycobacterium ulcerans Agy99	4550025
YP_908177.1	CDS	MUL_4792	NC_008611.1	5306645	5307142	D	cytoplasmic protein; phosphoesterase	5306645..5307142	Mycobacterium ulcerans Agy99	4552146
YP_908178.1	CDS	fbpC	NC_008611.1	5307495	5308535	D	Also detected in the cytoplasm and the membrane fractions by proteomics.; secreted protein; proteins of the antigen 85 complex are responsible for the high affinity of mycobacteria to fibronectin. possesses a mycolyltransferase activity required for the biogenesis of trehalose dimycolate (cord factor), a dominant structure necessary for maintaining cell wall integrity.; secreted antigen 85-C FbpC	5307495..5308535	Mycobacterium ulcerans Agy99	4552147
YP_908179.1	CDS	MUL_4796	NC_008611.1	5309411	5310778	R	Detected in the extracellular matrix and the cytoplasmic fractions by proteomics.; cytoplasmic protein; hypothetical protein	complement(5309411..5310778)	Mycobacterium ulcerans Agy99	4552149
YP_908180.1	CDS	treS	NC_008611.1	5310852	5312645	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; involved in trehalose biosynthesis (protective effect) converts maltose to trehalose. mycobacteria can produce trehalose from glucose 6-phosphate and UDP-glucose (the OtsA-OtsB pathway) from glycogen-like alpha(1-->4)- linked glucose polymers (the TreY-TreZ pathway) and from maltose (the TreS pathway); trehalose synthase TreS	complement(5310852..5312645)	Mycobacterium ulcerans Agy99	4552150
YP_908181.1	CDS	pepA	NC_008611.1	5312758	5313789	R	Three isoforms were also detected in the cytoplasm.; secreted protein; function unknown, possibly hydrolyzes peptides and/or proteins (seems to cleave preferentially after serine residues); serine protease PepA	complement(5312758..5313789)	Mycobacterium ulcerans Agy99	4552151
YP_908182.1	CDS	MUL_4799	NC_008611.1	5313944	5314444	R	cytoplasmic protein; maybe involved in oxidization of aromatic hydrocarbons; dioxygenase subunit beta	complement(5313944..5314444)	Mycobacterium ulcerans Agy99	4552152
YP_908183.1	CDS	MUL_4800	NC_008611.1	5314506	5314916	D	cytoplasmic protein; hypothetical protein	5314506..5314916	Mycobacterium ulcerans Agy99	4552153
YP_908184.1	CDS	MUL_4802	NC_008611.1	5317261	5317737	D	membrane protein; hypothetical protein	5317261..5317737	Mycobacterium ulcerans Agy99	4552155
YP_908185.1	CDS	fadD7	NC_008611.1	5317734	5319368	R	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	complement(5317734..5319368)	Mycobacterium ulcerans Agy99	4552156
YP_908186.1	CDS	oxcA	NC_008611.1	5319635	5321398	D	catalyzes the formation of formyl-CoA from oxalyl-CoA; putative oxalyl-CoA decarboxylase	5319635..5321398	Mycobacterium ulcerans Agy99	4552157
YP_908187.1	CDS	oxyS	NC_008611.1	5321555	5322313	R	cytoplasmic protein; could effect functions of OxyR during evolution.; oxidative stress response regulatory protein OxyS	complement(5321555..5322313)	Mycobacterium ulcerans Agy99	4552158
YP_908188.1	CDS	MUL_4806	NC_008611.1	5322759	5323484	D	secreted protein; hypothetical protein	5322759..5323484	Mycobacterium ulcerans Agy99	4552159
YP_908189.1	CDS	MUL_4807	NC_008611.1	5323536	5325284	R	membrane protein; H(+)-stimulated, highly selective, divalent cation uptake system. responsible for the translocation of the divalent metal across the membrane.; divalent cation-transport integral membrane protein	complement(5323536..5325284)	Mycobacterium ulcerans Agy99	4552160
YP_908190.1	CDS	MUL_4808	NC_008611.1	5325392	5325574	R	hypothetical protein	complement(5325392..5325574)	Mycobacterium ulcerans Agy99	4552161
YP_908191.1	CDS	MUL_4809	NC_008611.1	5326182	5326847	D	cytoplasmic protein; thought to be involved in transfer of methyl group.; O-methyltransferase	5326182..5326847	Mycobacterium ulcerans Agy99	4552162
YP_908192.1	CDS	MUL_4810	NC_008611.1	5326851	5328863	R	membrane protein; function unknown, probably involved in cellular metabolism.; transmembrane acyltransferase	complement(5326851..5328863)	Mycobacterium ulcerans Agy99	4552163
YP_908193.1	CDS	MUL_4811	NC_008611.1	5329101	5330288	R	cytoplasmic protein; function unknown.  possibly involved in energy production and conversion.; hypothetical protein	complement(5329101..5330288)	Mycobacterium ulcerans Agy99	4550657
YP_908194.1	CDS	MUL_4812	NC_008611.1	5330314	5331249	R	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short-chain type dehydrogenase/reductase	complement(5330314..5331249)	Mycobacterium ulcerans Agy99	4550658
YP_908195.1	CDS	MUL_4813	NC_008611.1	5331474	5333111	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism; monoxygenase	complement(5331474..5333111)	Mycobacterium ulcerans Agy99	4550659
YP_908196.1	CDS	MUL_4814	NC_008611.1	5333108	5334289	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism; monooxygenase	complement(5333108..5334289)	Mycobacterium ulcerans Agy99	4550660
YP_908197.1	CDS	MUL_4817	NC_008611.1	5336713	5338335	D	cytoplasmic protein; hypothetical protein	5336713..5338335	Mycobacterium ulcerans Agy99	4550663
YP_908198.1	CDS	MUL_4818	NC_008611.1	5338348	5339127	D	cytoplasmic protein; involved in transcriptional mechanism.; GntR family transcriptional regulator	5338348..5339127	Mycobacterium ulcerans Agy99	4550664
YP_908199.1	CDS	MUL_4820	NC_008611.1	5340749	5341465	D	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short-chain type dehydrogenase/reductase	5340749..5341465	Mycobacterium ulcerans Agy99	4550666
YP_908200.1	CDS	MUL_4822	NC_008611.1	5342015	5342779	R	membrane protein; serine protease	complement(5342015..5342779)	Mycobacterium ulcerans Agy99	4550668
YP_908201.1	CDS	MUL_4824	NC_008611.1	5344361	5345428	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5344361..5345428)	Mycobacterium ulcerans Agy99	4550670
YP_908202.1	CDS	MUL_4825	NC_008611.1	5346190	5346396	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS, and also in the membrane fraction by proteomics (LC- MS/MS); cytoplasmic protein; hypothetical protein	5346190..5346396	Mycobacterium ulcerans Agy99	4550671
YP_908203.1	CDS	ctpI	NC_008611.1	5346865	5351727	D	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; cation-transporting ATPase; possibly catalyzes the transport of a cation (possibly magnesium) with the hydrolyse of ATP [catalytic activity: ATP + H(2)O + cation(in) = ADP + phosphate + cation(out)]; cation-transporter ATPase I CtpI	5346865..5351727	Mycobacterium ulcerans Agy99	4550672
YP_908204.1	CDS	fadD12_2	NC_008611.1	5351700	5353286	R	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	complement(5351700..5353286)	Mycobacterium ulcerans Agy99	4550673
YP_908205.1	CDS	MUL_4828	NC_008611.1	5353289	5354188	R	cytoplasmic protein; function unknown; supposed involved in cellular metabolism.; short-chain type dehydrogenase/reductase	complement(5353289..5354188)	Mycobacterium ulcerans Agy99	4550674
YP_908206.1	CDS	rpmE2	NC_008611.1	5354358	5354630	R	RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31	complement(5354358..5354630)	Mycobacterium ulcerans Agy99	4550675
YP_908207.1	CDS	MUL_4830	NC_008611.1	5354627	5355823	R	Detected in the membrane fraction by proteomics.; cytoplasmic protein; hypothetical protein	complement(5354627..5355823)	Mycobacterium ulcerans Agy99	4552017
YP_908208.1	CDS	rpmB2	NC_008611.1	5355953	5356189	D	cytoplasmic protein; involved in ribosome activity; 50S ribosomal protein L28	5355953..5356189	Mycobacterium ulcerans Agy99	4552018
YP_908209.1	CDS	rpmG	NC_008611.1	5356189	5356353	D	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33	5356189..5356353	Mycobacterium ulcerans Agy99	4552019
YP_908210.1	CDS	rpsN	NC_008611.1	5356354	5356659	D	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14	5356354..5356659	Mycobacterium ulcerans Agy99	4552020
YP_908211.1	CDS	rpsR2	NC_008611.1	5356666	5356929	D	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18	5356666..5356929	Mycobacterium ulcerans Agy99	4552021
YP_908212.1	CDS	MUL_4835	NC_008611.1	5356950	5357900	R	cytoplasmic protein; hypothetical protein	complement(5356950..5357900)	Mycobacterium ulcerans Agy99	4552022
YP_908213.1	CDS	MUL_4837	NC_008611.1	5358100	5358693	D	cytoplasmic protein; involved in transcriptional mechanism.; transcriptional regulatory protein	5358100..5358693	Mycobacterium ulcerans Agy99	4552023
YP_908214.1	CDS	lipJ	NC_008611.1	5358696	5360072	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism; lignin peroxidase LipJ	5358696..5360072	Mycobacterium ulcerans Agy99	4552024
YP_908215.1	CDS	MUL_4842	NC_008611.1	5364216	5365262	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	5364216..5365262	Mycobacterium ulcerans Agy99	4552028
YP_908216.1	CDS	MUL_4844	NC_008611.1	5365829	5366635	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, probably involved in cellular metabolism; short-chain type dehydrogenase/reductase	5365829..5366635	Mycobacterium ulcerans Agy99	4552030
YP_908217.1	CDS	ctpB	NC_008611.1	5366880	5369153	D	membrane protein; cation-transporting ATPase; possibly catalyzes the transport of a cation (possibly coopper) with the hydrolyse of ATP [catalytic activity: ATP + H(2)O + cation(in) = ADP + orthophosphate + cation(out)]; cation-transporter p-type ATPase B CtpB	5366880..5369153	Mycobacterium ulcerans Agy99	4552031
YP_908218.1	CDS	MUL_4846	NC_008611.1	5369146	5369364	D	Detected in the cytoplasmic and secreted protein fractions by 2D-LC-MS/MS.; secreted protein; hypothetical protein	5369146..5369364	Mycobacterium ulcerans Agy99	4552032
YP_908219.1	CDS	MUL_4847	NC_008611.1	5369381	5371384	R	membrane protein; integral membrane protein	complement(5369381..5371384)	Mycobacterium ulcerans Agy99	4552033
YP_908220.1	CDS	MUL_4848	NC_008611.1	5371549	5372292	D	secreted protein; hypothetical protein	5371549..5372292	Mycobacterium ulcerans Agy99	4552034
YP_908221.1	CDS	sigC_1	NC_008611.1	5372328	5372882	R	cytoplasmic protein; involved in promoter recognition, transcription initiation.; ECF subfamily RNA polymerase sigma factor	complement(5372328..5372882)	Mycobacterium ulcerans Agy99	4549613
YP_908222.1	CDS	ctpA	NC_008611.1	5373007	5375298	D	membrane protein; cation-transporting ATPase; possibly catalyzes the transport of a cation (possibly copper) with the hydrolyse of ATP [catalytic activity: ATP + H(2)O + cation(in) = ADP + phosphate + cation(out)]; cation transporter p-type ATPase a CtpA	5373007..5375298	Mycobacterium ulcerans Agy99	4549614
YP_908223.1	CDS	MUL_4851	NC_008611.1	5375319	5376044	R	membrane protein; hypothetical protein	complement(5375319..5376044)	Mycobacterium ulcerans Agy99	4549615
YP_908224.1	CDS	omt_1	NC_008611.1	5376126	5376935	R	cytoplasmic protein; function unknown, but supposed involved in lipid metabolism; O-methyltransferase Omt	complement(5376126..5376935)	Mycobacterium ulcerans Agy99	4549616
YP_908225.1	CDS	MUL_4853	NC_008611.1	5377263	5378681	D	PPE1; membrane protein; PPE family protein	5377263..5378681	Mycobacterium ulcerans Agy99	4549617
YP_908226.1	CDS	MUL_4854	NC_008611.1	5378875	5379744	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	5378875..5379744	Mycobacterium ulcerans Agy99	4549618
YP_908227.1	CDS	MUL_4855	NC_008611.1	5379741	5380295	D	cytoplasmic protein; hypothetical protein	5379741..5380295	Mycobacterium ulcerans Agy99	4549619
YP_908228.1	CDS	fadD10	NC_008611.1	5380324	5381919	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	5380324..5381919	Mycobacterium ulcerans Agy99	4549620
YP_908229.1	CDS	MUL_4857	NC_008611.1	5381924	5382163	D	cytoplasmic protein; hypothetical protein	5381924..5382163	Mycobacterium ulcerans Agy99	4549621
YP_908230.1	CDS	MUL_4858	NC_008611.1	5382160	5386410	D	membrane protein; involved in lipid metabolism.; non-ribosomal peptide synthetase	5382160..5386410	Mycobacterium ulcerans Agy99	4549622
YP_908231.1	CDS	MUL_4860	NC_008611.1	5389428	5390231	R	cytoplasmic protein; function unknown, but possibly involvement in lipid metabolism.; ketoacyl reductase	complement(5389428..5390231)	Mycobacterium ulcerans Agy99	4549624
YP_908232.1	CDS	MUL_4861	NC_008611.1	5390333	5390818	R	cytoplasmic protein; hypothetical protein	complement(5390333..5390818)	Mycobacterium ulcerans Agy99	4549625
YP_908233.1	CDS	mtn	NC_008611.1	5391176	5391931	R	cytoplasmic protein; responsible for cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and s- adenosylhomocysteine (sah) [catalytic activity 1: methylthioadenosine + H2O = adenine + 5-methylthio-D- ribose] [catalytic activity 2: S-adenosyl-L-homocysteine + H2O = adenine + S-D-ribosyl-L-homocysteine]; bifunctional Mta/Sah nucleosidase Mtn	complement(5391176..5391931)	Mycobacterium ulcerans Agy99	4549626
YP_908234.1	CDS	MUL_4863	NC_008611.1	5392042	5392866	R	cytoplasmic protein; hypothetical protein	complement(5392042..5392866)	Mycobacterium ulcerans Agy99	4549627
YP_908235.1	CDS	MUL_4864	NC_008611.1	5392863	5393492	R	cytoplasmic protein; possibly involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(5392863..5393492)	Mycobacterium ulcerans Agy99	4549628
YP_908236.1	CDS	MUL_4865	NC_008611.1	5393538	5394398	R	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short-chain type dehydrogenase/reductase	complement(5393538..5394398)	Mycobacterium ulcerans Agy99	4549629
YP_908237.1	CDS	MUL_4866	NC_008611.1	5394468	5395082	D	cytoplasmic protein; hypothetical protein	5394468..5395082	Mycobacterium ulcerans Agy99	4549630
YP_908238.1	CDS	MUL_4867	NC_008611.1	5395107	5395877	R	membrane protein; hypothetical protein	complement(5395107..5395877)	Mycobacterium ulcerans Agy99	4549631
YP_908239.1	CDS	echA8_7	NC_008611.1	5396183	5396983	D	cytoplasmic protein; oxidizes fatty acids using specific components (by similarity) [catalytic activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H(2)O]; enoyl-CoA hydratase, EchA8_7	5396183..5396983	Mycobacterium ulcerans Agy99	4550834
YP_908240.1	CDS	MUL_4869	NC_008611.1	5397041	5397640	R	cytoplasmic protein; thought to cause methylation.; methyltransferase/methylase	complement(5397041..5397640)	Mycobacterium ulcerans Agy99	4550835
YP_908241.1	CDS	MUL_4870	NC_008611.1	5397757	5398569	D	cytoplasmic protein; function unknown, possibly involved in cellular metabolism.; short chain dehydrogenase	5397757..5398569	Mycobacterium ulcerans Agy99	4550836
YP_908242.1	CDS	adhD	NC_008611.1	5400482	5401639	D	cytoplasmic protein; function unknown, generates an aldehyde (or perhaps a ketone) from an alcohol.; zinc-type alcohol dehydrogenase AdhD	5400482..5401639	Mycobacterium ulcerans Agy99	4550838
YP_908243.1	CDS	MUL_4873	NC_008611.1	5401523	5403199	R	membrane protein; function unknown, involved in cellular metabolism.; monooxygenase	complement(5401523..5403199)	Mycobacterium ulcerans Agy99	4550839
YP_908244.1	CDS	MUL_4875	NC_008611.1	5405098	5405727	R	Detected in the cytoplasmic and membrane fractions by proteomics.; cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(5405098..5405727)	Mycobacterium ulcerans Agy99	4550841
YP_908245.1	CDS	MUL_4876	NC_008611.1	5405877	5406539	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	5405877..5406539	Mycobacterium ulcerans Agy99	4550842
YP_908246.1	CDS	MUL_4877	NC_008611.1	5406536	5407546	D	cytoplasmic protein; function unknown.  possibly involved in cellular metabolism.; hypothetical protein	5406536..5407546	Mycobacterium ulcerans Agy99	4550843
YP_908247.1	CDS	MUL_4879	NC_008611.1	5408172	5408645	R	cytoplasmic protein; hypothetical protein	complement(5408172..5408645)	Mycobacterium ulcerans Agy99	4550845
YP_908248.1	CDS	MUL_4881	NC_008611.1	5408848	5409060	D	cytoplasmic protein; function unknown, contains copper chaperone domain.; hypothetical protein	5408848..5409060	Mycobacterium ulcerans Agy99	4550846
YP_908249.1	CDS	MUL_4882	NC_008611.1	5409096	5409947	D	secreted protein; hypothetical protein	5409096..5409947	Mycobacterium ulcerans Agy99	4550847
YP_908250.1	CDS	MUL_4884	NC_008611.1	5412356	5413540	R	membrane protein; function unknown, involved in cellular metabolism.; dioxygenase	complement(5412356..5413540)	Mycobacterium ulcerans Agy99	4550849
YP_908251.1	CDS	MUL_4885	NC_008611.1	5413600	5414406	D	cytoplasmic protein; hypothetical protein	5413600..5414406	Mycobacterium ulcerans Agy99	4550850
YP_908252.1	CDS	MUL_4886	NC_008611.1	5414451	5414900	R	cytoplasmic protein; function unknown.  contains HTH motif. may be involved in transcription regulation.; hypothetical protein	complement(5414451..5414900)	Mycobacterium ulcerans Agy99	4550851
YP_908253.1	CDS	MUL_4888	NC_008611.1	5415969	5416559	R	cytoplasmic protein; hypothetical protein	complement(5415969..5416559)	Mycobacterium ulcerans Agy99	4554172
YP_908254.1	CDS	MUL_4889	NC_008611.1	5416573	5417196	R	secreted protein; hypothetical protein	complement(5416573..5417196)	Mycobacterium ulcerans Agy99	4554173
YP_908255.1	CDS	MUL_4890	NC_008611.1	5417335	5417940	R	cytoplasmic protein; possibly involved in transcriptional mechanism.; transcriptional regulatory protein	complement(5417335..5417940)	Mycobacterium ulcerans Agy99	4554174
YP_908256.1	CDS	MUL_4891	NC_008611.1	5418001	5418831	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	5418001..5418831	Mycobacterium ulcerans Agy99	4554175
YP_908257.1	CDS	MUL_4892	NC_008611.1	5418895	5419488	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(5418895..5419488)	Mycobacterium ulcerans Agy99	4554176
YP_908258.1	CDS	MUL_4893	NC_008611.1	5419623	5420648	D	cytoplasmic protein; hypothetical protein	5419623..5420648	Mycobacterium ulcerans Agy99	4554177
YP_908259.1	CDS	MUL_4895	NC_008611.1	5421294	5422637	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(5421294..5422637)	Mycobacterium ulcerans Agy99	4554179
YP_908260.1	CDS	MUL_4896	NC_008611.1	5423065	5424111	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5423065..5424111)	Mycobacterium ulcerans Agy99	4554180
YP_908261.1	CDS	MUL_4899	NC_008611.1	5426406	5426963	D	cytoplasmic protein; hypothetical protein	5426406..5426963	Mycobacterium ulcerans Agy99	4554183
YP_908262.1	CDS	MUL_4900	NC_008611.1	5427022	5428635	R	membrane protein; function unknown, probably involved in cellular metabolism; hypothetical protein	complement(5427022..5428635)	Mycobacterium ulcerans Agy99	4554184
YP_908263.1	CDS	sdaA	NC_008611.1	5428753	5430138	R	cytoplasmic protein; involved in gluconeogenesis from serine [catalytic activity: L-serine + H2O = pyruvate + NH3 + H2O]; L-serine dehydratase SdaA	complement(5428753..5430138)	Mycobacterium ulcerans Agy99	4554185
YP_908264.1	CDS	glyA	NC_008611.1	5430135	5431412	R	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase	complement(5430135..5431412)	Mycobacterium ulcerans Agy99	4554186
YP_908265.1	CDS	gcvH_1	NC_008611.1	5431409	5431813	R	cytoplasmic protein; the glycine cleavage system catalyses the degradation of glycine. the H protein shuttles the methylamine group of glycine from the P protein to the T protein; glycine cleavage system H protein GcvH	complement(5431409..5431813)	Mycobacterium ulcerans Agy99	4554187
YP_908266.1	CDS	MUL_4906	NC_008611.1	5436233	5436331	D	hypothetical protein	5436233..5436331	Mycobacterium ulcerans Agy99	4553749
YP_908267.1	CDS	MUL_4908	NC_008611.1	5437540	5438586	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5437540..5438586)	Mycobacterium ulcerans Agy99	4553751
YP_908268.1	CDS	MUL_4909	NC_008611.1	5439094	5440269	R	membrane protein; PE-PGRS family protein	complement(5439094..5440269)	Mycobacterium ulcerans Agy99	4553752
YP_908269.1	CDS	esxP_2	NC_008611.1	5440660	5440929	R	disruption by insertion sequence (missing 11 aa); secreted protein; EsaT-6 like protein EsxP_2	complement(5440660..5440929)	Mycobacterium ulcerans Agy99	4553753
YP_908270.1	CDS	MUL_4911	NC_008611.1	5441233	5441937	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; N-term transposase for IS2404	5441233..5441937	Mycobacterium ulcerans Agy99	4553754
YP_908271.1	CDS	MUL_4912	NC_008611.1	5441962	5442279	D	cytoplasmic protein; required for the transposition of insertion element IS2404.; C-term transposase for IS2404	5441962..5442279	Mycobacterium ulcerans Agy99	4553755
YP_908272.1	CDS	mce6F	NC_008611.1	5444883	5446121	R	membrane protein; function unknown, but thought involved in host cell invasion.; MCE-family protein Mce6F	complement(5444883..5446121)	Mycobacterium ulcerans Agy99	4553757
YP_908273.1	CDS	mce6E	NC_008611.1	5446118	5447245	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE family lipoprotein Mce6E	complement(5446118..5447245)	Mycobacterium ulcerans Agy99	4553758
YP_908274.1	CDS	mce6D	NC_008611.1	5447242	5448354	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce6D	complement(5447242..5448354)	Mycobacterium ulcerans Agy99	4553759
YP_908275.1	CDS	mce6C	NC_008611.1	5448351	5449397	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce6C	complement(5448351..5449397)	Mycobacterium ulcerans Agy99	4553760
YP_908276.1	CDS	mce6B	NC_008611.1	5449390	5450418	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce6B	complement(5449390..5450418)	Mycobacterium ulcerans Agy99	4553761
YP_908277.1	CDS	mce6A	NC_008611.1	5450482	5451972	R	membrane protein; function unknown, but thought to be involved in host cell invasion.; MCE-family protein Mce6A	complement(5450482..5451972)	Mycobacterium ulcerans Agy99	4553762
YP_908278.1	CDS	yrbE6B	NC_008611.1	5451975	5452841	R	membrane protein; integral membrane protein YrbE6B	complement(5451975..5452841)	Mycobacterium ulcerans Agy99	4553763
YP_908279.1	CDS	yrbE6A	NC_008611.1	5452843	5453688	R	membrane protein; integral membrane protein YrbE6A	complement(5452843..5453688)	Mycobacterium ulcerans Agy99	4553764
YP_908280.1	CDS	pks16_1	NC_008611.1	5453698	5455350	R	activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase	complement(5453698..5455350)	Mycobacterium ulcerans Agy99	4551469
YP_908281.1	CDS	MUL_4923	NC_008611.1	5455347	5455628	R	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; thought to be involved in de novo fatty acid biosynthesis; this protein is the carrier of the growing fatty acid chain in fatty acid biosynthesis; acyl carrier protein	complement(5455347..5455628)	Mycobacterium ulcerans Agy99	4551470
YP_908282.1	CDS	MUL_4924	NC_008611.1	5455644	5456420	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); membrane protein; hypothetical protein	complement(5455644..5456420)	Mycobacterium ulcerans Agy99	4551471
YP_908283.1	CDS	MUL_4925	NC_008611.1	5456417	5457391	R	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplamic and extracellular matrix fractions.; membrane protein; probably involved in active transport of substrate across the membrane (export) responsible for energy coupling to the transport system.; ABC transporter ATP-binding protein	complement(5456417..5457391)	Mycobacterium ulcerans Agy99	4551472
YP_908284.1	CDS	MUL_4926	NC_008611.1	5457366	5458094	R	Also detected in the cytoplamic, the extracellular matrix and the membrane fractions by proteomics.; membrane protein; hypothetical protein	complement(5457366..5458094)	Mycobacterium ulcerans Agy99	4551473
YP_908285.1	CDS	MUL_4927	NC_008611.1	5458106	5458612	R	Detected in cytoplasmic and membrane fraction by proteomics.; cytoplasmic protein; hypothetical protein	complement(5458106..5458612)	Mycobacterium ulcerans Agy99	4551474
YP_908286.1	CDS	MUL_4928	NC_008611.1	5458609	5459352	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; hypothetical protein	complement(5458609..5459352)	Mycobacterium ulcerans Agy99	4551475
YP_908287.1	CDS	MUL_4929	NC_008611.1	5459349	5460857	R	Detected in the cytoplamic fraction by LC-MS/MS. Also detected in the extracellular matrix  and membrane fraction by proteomics.; cytoplasmic protein; catalyzes the production of GabA [catalytic activity: L-glutamate = 4-aminobutanoate + CO(2)]; glutamate decarboxylase	complement(5459349..5460857)	Mycobacterium ulcerans Agy99	4551476
YP_908288.1	CDS	gabT_2	NC_008611.1	5460854	5462203	R	Detected in the membrane fraction by proteomics.; cytoplasmic protein; 4-aminobutyrate aminotransferase	complement(5460854..5462203)	Mycobacterium ulcerans Agy99	4551477
YP_908289.1	CDS	MUL_4931	NC_008611.1	5462203	5463300	R	membrane protein; function unknown.; hypothetical protein	complement(5462203..5463300)	Mycobacterium ulcerans Agy99	4551478
YP_908290.1	CDS	MUL_4932	NC_008611.1	5463297	5464277	R	Detected in the membrane fraction by proteomics.; membrane protein; function unknown, probably involved in cellular metabolism.; nucleoside-diphosphate-sugar epimerase	complement(5463297..5464277)	Mycobacterium ulcerans Agy99	4551479
YP_908291.1	CDS	MUL_4933	NC_008611.1	5464277	5465458	R	Also detected in the membrane fraction by proteomics.; cytoplasmic protein; hypothetical protein	complement(5464277..5465458)	Mycobacterium ulcerans Agy99	4551480
YP_908292.1	CDS	MUL_4934	NC_008611.1	5465451	5466539	R	membrane protein; hypothetical protein	complement(5465451..5466539)	Mycobacterium ulcerans Agy99	4551481
YP_908293.1	CDS	MUL_4935	NC_008611.1	5466914	5467639	D	membrane protein; hypothetical protein	5466914..5467639	Mycobacterium ulcerans Agy99	4551482
YP_908294.1	CDS	MUL_4936	NC_008611.1	5467684	5468442	D	secreted protein; function unknown.  possibly secreted.; hypothetical protein	5467684..5468442	Mycobacterium ulcerans Agy99	4551483
YP_908295.1	CDS	MUL_4938	NC_008611.1	5468945	5469268	D	membrane protein; hypothetical protein	5468945..5469268	Mycobacterium ulcerans Agy99	4551484
YP_908296.1	CDS	icd2	NC_008611.1	5469945	5472182	D	Also detected in the membrane fraction by proteomics (LC-MS/MS); cytoplasmic protein; involved in the krebs cycle [catalytic activity: isocitrate + NADP+ = 2-oxoglutarate + CO(2) + NADPH]; isocitrate dehydrogenase [NADP] Icd2	5469945..5472182	Mycobacterium ulcerans Agy99	4551485
YP_908297.1	CDS	cyaA	NC_008611.1	5472296	5473420	D	cytoplasmic protein; possibly involved in camp synthesis [catalytic activity: ATP = 3',5'-cyclic AMP + diphosphate]; adenylate cyclase CyaA	5472296..5473420	Mycobacterium ulcerans Agy99	4551486
YP_908298.1	CDS	fadE36_1	NC_008611.1	5474796	5475851	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS.; cytoplasmic protein; function unknown, but possibly involvement in lipid degradation.; acyl-CoA dehydrogenase FadE36	5474796..5475851	Mycobacterium ulcerans Agy99	4551488
YP_908299.1	CDS	MUL_4943	NC_008611.1	5475873	5476913	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; coenzyme F420-dependent oxidoreductase	complement(5475873..5476913)	Mycobacterium ulcerans Agy99	4552266
YP_908300.1	CDS	MUL_4944	NC_008611.1	5476972	5477403	R	cytoplasmic protein; hypothetical protein	complement(5476972..5477403)	Mycobacterium ulcerans Agy99	4552267
YP_908301.1	CDS	MUL_4945	NC_008611.1	5477531	5478097	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	5477531..5478097	Mycobacterium ulcerans Agy99	4552268
YP_908302.1	CDS	MUL_4947	NC_008611.1	5479535	5480179	D	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	5479535..5480179	Mycobacterium ulcerans Agy99	4552270
YP_908303.1	CDS	fadE25_2	NC_008611.1	5480184	5481395	D	Detected in the cytoplasmic fraction by proteomics. Also detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, but involved in lipid degradation [catalytic activity: acyl-CoA + ETF = 2,3-dehydroacyl-CoA + reduced ETF]; acyl-CoA dehydrogenase FadE25_2	5480184..5481395	Mycobacterium ulcerans Agy99	4552271
YP_908304.1	CDS	MUL_4949	NC_008611.1	5481464	5482672	D	membrane protein; function unknown, glycosyltransferases, related to UDP-glucuronosyltransferase; glycosyltransferase	5481464..5482672	Mycobacterium ulcerans Agy99	4552272
YP_908305.1	CDS	MUL_4950	NC_008611.1	5482849	5483469	D	secreted protein; function unknown.; hypothetical protein	5482849..5483469	Mycobacterium ulcerans Agy99	4552273
YP_908306.1	CDS	MUL_4951	NC_008611.1	5483491	5484654	R	cytoplasmic protein; ATPase	complement(5483491..5484654)	Mycobacterium ulcerans Agy99	4552274
YP_908307.1	CDS	MUL_4952	NC_008611.1	5484788	5485279	D	cytoplasmic protein; transcriptional regulator	5484788..5485279	Mycobacterium ulcerans Agy99	4552275
YP_908308.1	CDS	MUL_4953	NC_008611.1	5485310	5485726	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	5485310..5485726	Mycobacterium ulcerans Agy99	4552276
YP_908309.1	CDS	MUL_4954	NC_008611.1	5485822	5486220	D	cytoplasmic protein; hypothetical protein	5485822..5486220	Mycobacterium ulcerans Agy99	4552277
YP_908310.1	CDS	ltp1_1	NC_008611.1	5486251	5487462	D	membrane protein; possibly catalyzes the transfer of a great variety of lipids between membranes.; lipid-transfer protein Ltp1	5486251..5487462	Mycobacterium ulcerans Agy99	4552278
YP_908311.1	CDS	MUL_4956	NC_008611.1	5487471	5488046	R	Detected in the membrane fraction by proteomics (2D- LC-MS/MS); cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(5487471..5488046)	Mycobacterium ulcerans Agy99	4552279
YP_908312.1	CDS	MUL_4957	NC_008611.1	5488361	5489227	D	cytoplasmic protein; hypothetical protein	5488361..5489227	Mycobacterium ulcerans Agy99	4552280
YP_908313.1	CDS	fadE6_1	NC_008611.1	5489235	5491460	D	membrane protein; function unknown, but involved in lipid degradation.; acyl-CoA dehydrogenase FadE6	5489235..5491460	Mycobacterium ulcerans Agy99	4552281
YP_908314.1	CDS	MUL_4959	NC_008611.1	5491616	5492809	D	cytoplasmic protein; hypothetical protein	5491616..5492809	Mycobacterium ulcerans Agy99	4552282
YP_908315.1	CDS	MUL_4960	NC_008611.1	5492849	5493115	R	cytoplasmic protein; hypothetical protein	complement(5492849..5493115)	Mycobacterium ulcerans Agy99	4552283
YP_908316.1	CDS	MUL_4961	NC_008611.1	5493167	5494351	R	membrane protein; intergral membrane protein	complement(5493167..5494351)	Mycobacterium ulcerans Agy99	4552284
YP_908317.1	CDS	MUL_4962	NC_008611.1	5494510	5495229	R	cytoplasmic protein; hypothetical protein	complement(5494510..5495229)	Mycobacterium ulcerans Agy99	4551037
YP_908318.1	CDS	MUL_4963	NC_008611.1	5495239	5495598	R	cytoplasmic protein; hypothetical protein	complement(5495239..5495598)	Mycobacterium ulcerans Agy99	4551038
YP_908319.1	CDS	MUL_4964	NC_008611.1	5496012	5497058	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5496012..5497058)	Mycobacterium ulcerans Agy99	4551039
YP_908320.1	CDS	MUL_4967	NC_008611.1	5499699	5500184	D	Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator	5499699..5500184	Mycobacterium ulcerans Agy99	4551043
YP_908321.1	CDS	MUL_4968	NC_008611.1	5500244	5500684	D	membrane protein; hypothetical protein	5500244..5500684	Mycobacterium ulcerans Agy99	4551044
YP_908322.1	CDS	MUL_4969	NC_008611.1	5500784	5502175	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, probably involved in cellular metabolism.; oxidoreductase	5500784..5502175	Mycobacterium ulcerans Agy99	4551045
YP_908323.1	CDS	MUL_4970	NC_008611.1	5502176	5502940	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, supposed involved in cellular metabolism.; short chain dehydrogenase	5502176..5502940	Mycobacterium ulcerans Agy99	4551046
YP_908324.1	CDS	MUL_4971	NC_008611.1	5502943	5504907	D	membrane protein; hypothetical protein	5502943..5504907	Mycobacterium ulcerans Agy99	4551047
YP_908325.1	CDS	embC	NC_008611.1	5504907	5508179	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in the biosynthesis of the mycobacterial cell wall arabinan and resistance to ethambutol (Emb; dextro-2,2'-(ethylenediimino)-di-1-butanol) polymerizes arabinose into the arabinan of arabiogalactan [catalytic activity: UDP-L-arabinose + indol-3-ylacetyl-myo-inositol = UDP + indol-3-ylacetyl-myo-inositol L-arabinoside]; integral membrane indolylacetylinositol arabinosyltransferase EmbC	5504907..5508179	Mycobacterium ulcerans Agy99	4551048
YP_908326.1	CDS	embA	NC_008611.1	5508389	5511730	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in the biosynthesis of the mycobacterial cell wall arabinan and resistance to ethambutol (Emb; dextro-2,2'-(ethylenediimino)-di-1-butanol) polymerizes arabinose into the arabinan of arabiogalactan [catalytic activity: UDP-L-arabinose + indol-3-ylacetyl-myo-inositol = UDP + indol-3-ylacetyl-myo-inositol L-arabinoside]; integral membrane indolylacetylinositol arabinosyltransferase EmbA	5508389..5511730	Mycobacterium ulcerans Agy99	4551049
YP_908327.1	CDS	embB	NC_008611.1	5511727	5514954	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; involved in the biosynthesis of the mycobacterial cell wall arabinan and resistance to ethambutol (Emb; dextro-2,2'-(ethylenediimino)-di-1-butanol) polymerizes arabinose into the arabinan of arabiogalactan [catalytic activity: UDP-L-arabinose + indol-3-ylacetyl-myo-inositol = UDP + indol-3-ylacetyl-myo-inositol L-arabinoside]; integral membrane indolylacetylinositol arabinosyltransferase EmbB	5511727..5514954	Mycobacterium ulcerans Agy99	4551050
YP_908328.1	CDS	MUL_4975	NC_008611.1	5515263	5516309	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5515263..5516309)	Mycobacterium ulcerans Agy99	4551051
YP_908329.1	CDS	MUL_4978	NC_008611.1	5517894	5518232	D	secreted protein; hypothetical protein	5517894..5518232	Mycobacterium ulcerans Agy99	4551053
YP_908330.1	CDS	MUL_4979	NC_008611.1	5518375	5518842	D	membrane protein; hypothetical protein	5518375..5518842	Mycobacterium ulcerans Agy99	4551054
YP_908331.1	CDS	accD4_1	NC_008611.1	5523988	5525538	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; key enzyme in the catabolic pathway of odd-chain fatty acids, isoleucine, threonine, methionine, and valine [catalytic activity: ATP + propionyl-CoA + CO(2) + H(2)O = ADP + orthophosphate + methylmalonyl-CoA]; propionyl-CoA carboxylase beta chain 4 AccD4	complement(5523988..5525538)	Mycobacterium ulcerans Agy99	4552625
YP_908332.1	CDS	pks13	NC_008611.1	5525568	5530919	R	cytoplasmic protein; the enzyme responsible for the final condensation step in mycolic acid biosynthesis, bringing the short and long (mero) chains together.; polyketide synthase Pks13	complement(5525568..5530919)	Mycobacterium ulcerans Agy99	4552626
YP_908333.1	CDS	fadD32	NC_008611.1	5530942	5532849	R	activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase	complement(5530942..5532849)	Mycobacterium ulcerans Agy99	4552627
YP_908334.1	CDS	MUL_4985	NC_008611.1	5533148	5534161	R	Detected in the membrane fraction by proteomics (LC- MS/MS); secreted protein; hypothetical protein	complement(5533148..5534161)	Mycobacterium ulcerans Agy99	4552628
YP_908335.1	CDS	fbpD	NC_008611.1	5534398	5535315	R	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); secreted protein; involved in cell wall mycoloylation. proteins of the antigen 85 complex are responsible for the high affinity of mycobacteria to fibronectin. possesses a mycolyltransferase activity required for the biogenesis of trehalose dimycolate (cord factor), a dominant structure necessary for maintaining cell wall integrity.; secreted Mpt51/Mpb51 antigen protein FbpD	complement(5534398..5535315)	Mycobacterium ulcerans Agy99	4552629
YP_908336.1	CDS	fbpA	NC_008611.1	5535479	5536492	R	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); secreted protein; involved in cell wall mycoloylation. proteins of the antigen 85 complex are responsible for the high affinity of mycobacteria to fibronectin. possesses a mycolyltransferase activity required for the biogenesis of trehalose dimycolate (cord factor), a dominant structure necessary for maintaining cell wall integrity.; secreted antigen 85-A FbpA	complement(5535479..5536492)	Mycobacterium ulcerans Agy99	4552630
YP_908337.1	CDS	MUL_4989	NC_008611.1	5536909	5538828	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	complement(5536909..5538828)	Mycobacterium ulcerans Agy99	4552631
YP_908338.1	CDS	MUL_4990	NC_008611.1	5538875	5539783	R	catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase	complement(5538875..5539783)	Mycobacterium ulcerans Agy99	4552632
YP_908339.1	CDS	MUL_4991	NC_008611.1	5539780	5540325	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; transmembrane protein	complement(5539780..5540325)	Mycobacterium ulcerans Agy99	4552633
YP_908340.1	CDS	glfT	NC_008611.1	5540318	5542216	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; converts UDP-galactofuranose in cell wall galactan polymerization. has UDP-GalF:beta-D-(1->5) and UDP- GalF:beta-D-(1->6) galactofuranosyltransferase activities.; bifunctional UDP-galactofuranosyl transferase GlfT	complement(5540318..5542216)	Mycobacterium ulcerans Agy99	4552634
YP_908341.1	CDS	glf	NC_008611.1	5542213	5543421	R	cytoplasmic protein; involved in lipopolysaccharide biosynthesis, in the conversion of UDP-galactopyranose into UDP-galactofuranose through a 2-keto intermediate [catalytic activity: UDP-D- galactopyranose = UDP-D-galacto-1,4-furanose]; UDP-galactopyranose mutase Glf	complement(5542213..5543421)	Mycobacterium ulcerans Agy99	4552635
YP_908342.1	CDS	erp	NC_008611.1	5543710	5544636	D	secreted protein; surface-exposed protein required for multiplication and intracellular growth. seems to play a role in virulence.; exported repetitive protein Erp	5543710..5544636	Mycobacterium ulcerans Agy99	4552636
YP_908343.1	CDS	MUL_4995	NC_008611.1	5544837	5546462	D	secreted protein; hypothetical protein	5544837..5546462	Mycobacterium ulcerans Agy99	4552637
YP_908344.1	CDS	MUL_4996	NC_008611.1	5546478	5547251	R	cytoplasmic protein; hypothetical protein	complement(5546478..5547251)	Mycobacterium ulcerans Agy99	4552638
YP_908345.1	CDS	MUL_4997	NC_008611.1	5547302	5548087	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; acyltransferase	complement(5547302..5548087)	Mycobacterium ulcerans Agy99	4552394
YP_908346.1	CDS	MUL_4998	NC_008611.1	5548121	5548876	R	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; acyltransferase	complement(5548121..5548876)	Mycobacterium ulcerans Agy99	4552395
YP_908347.1	CDS	MUL_4999	NC_008611.1	5548880	5549659	R	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; function unknown, probably involved in cellular metabolism.; acyltransferase	complement(5548880..5549659)	Mycobacterium ulcerans Agy99	4552396
YP_908348.1	CDS	MUL_5000	NC_008611.1	5549732	5550562	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism [catalytic activity: ATP + substrate = ADP + substrate 3'-phosphate]; phosphotransferase	5549732..5550562	Mycobacterium ulcerans Agy99	4552397
YP_908349.1	CDS	MUL_5001	NC_008611.1	5550526	5552076	D	cytoplasmic protein; hypothetical protein	5550526..5552076	Mycobacterium ulcerans Agy99	4552398
YP_908350.1	CDS	MUL_5002	NC_008611.1	5552073	5552405	D	cytoplasmic protein; hypothetical protein	5552073..5552405	Mycobacterium ulcerans Agy99	4552399
YP_908351.1	CDS	MUL_5004	NC_008611.1	5554005	5554652	R	cytoplasmic protein; involved in transcriptional mechanism.; TetR family transcriptional regulator	complement(5554005..5554652)	Mycobacterium ulcerans Agy99	4552401
YP_908352.1	CDS	MUL_5005	NC_008611.1	5554734	5555216	D	membrane protein; hypothetical protein	5554734..5555216	Mycobacterium ulcerans Agy99	4552402
YP_908353.1	CDS	serS	NC_008611.1	5555213	5556472	R	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase	complement(5555213..5556472)	Mycobacterium ulcerans Agy99	4552403
YP_908354.1	CDS	MUL_5007	NC_008611.1	5556631	5558007	D	membrane protein; hypothetical protein	5556631..5558007	Mycobacterium ulcerans Agy99	4552404
YP_908355.1	CDS	MUL_5008	NC_008611.1	5558012	5558362	D	cytoplasmic protein; hypothetical protein	5558012..5558362	Mycobacterium ulcerans Agy99	4552405
YP_908356.1	CDS	MUL_5010	NC_008611.1	5558642	5559328	R	cytoplasmic protein; thought to be involved in glycolisis and perhaps glycogen metabolism [catalytic activity: 3- phosphoglycerate = 2-phosphoglycerate]; phosphoglycerate mutase	complement(5558642..5559328)	Mycobacterium ulcerans Agy99	4552406
YP_908357.1	CDS	pheA	NC_008611.1	5559325	5560272	R	catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase	complement(5559325..5560272)	Mycobacterium ulcerans Agy99	4552407
YP_908358.1	CDS	MUL_5012	NC_008611.1	5560368	5561168	D	cytoplasmic protein; hypothetical protein	5560368..5561168	Mycobacterium ulcerans Agy99	4552408
YP_908359.1	CDS	MUL_5013	NC_008611.1	5561249	5562478	D	membrane protein; supposed involved in transcriptional mechanism.; transcriptional regulatory protein	5561249..5562478	Mycobacterium ulcerans Agy99	4552409
YP_908360.1	CDS	bfrB	NC_008611.1	5562681	5563226	D	Also detected in the extracellular matrix and the membrane fraction by proteomics.; cytoplasmic protein; involved in iron storage; ferritin is an intracellular molecule that stores iron in a soluble, nontoxic, readily available form. the functional molecule, which is composed of 24 chains, is roughly spherical and contains a central cavity in which the polymeric ferric iron core is deposited.; bacterioferritin BfrB	5562681..5563226	Mycobacterium ulcerans Agy99	4552410
YP_908361.1	CDS	glpQ1	NC_008611.1	5563223	5564068	R	cytoplasmic protein; glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [catalytic activity: a glycerophosphodiester + H(2)O = an alcohol + SN-glycerol 3- phosphate]; glycerophosphoryl diester phosphodiesterase	complement(5563223..5564068)	Mycobacterium ulcerans Agy99	4552411
YP_908362.1	CDS	MUL_5016	NC_008611.1	5564074	5565147	R	membrane protein; hypothetical protein	complement(5564074..5565147)	Mycobacterium ulcerans Agy99	4552412
YP_908363.1	CDS	MUL_5017	NC_008611.1	5565614	5565769	D	hypothetical protein	5565614..5565769	Mycobacterium ulcerans Agy99	4552413
YP_908364.1	CDS	sodA	NC_008611.1	5565918	5566541	D	Three isoforms were detected in the cytoplasm. Also detected in the extracellular matrix and the membrane fraction by proteomics.; cytoplasmic protein; destroys radicals which are normally produced within the cells and are toxic to biological systems [catalytic activity: 2 peroxide radical + 2 H(+) = O(2) + H(2)O(2)]; superoxide dismutase [Fe] SodA	5565918..5566541	Mycobacterium ulcerans Agy99	4549650
YP_908365.1	CDS	MUL_5019	NC_008611.1	5566875	5567291	D	membrane protein; hypothetical protein	5566875..5567291	Mycobacterium ulcerans Agy99	4549651
YP_908366.1	CDS	MUL_5020	NC_008611.1	5567544	5568248	D	membrane protein; hypothetical protein	5567544..5568248	Mycobacterium ulcerans Agy99	4549652
YP_908367.1	CDS	MUL_5021	NC_008611.1	5568711	5569109	D	Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); cytoplasmic protein; hypothetical protein	5568711..5569109	Mycobacterium ulcerans Agy99	4549653
YP_908368.1	CDS	MUL_5022	NC_008611.1	5569234	5569890	D	Detected in the membrane fraction by proteomics (LC- MS/MS); membrane protein; hypothetical protein	5569234..5569890	Mycobacterium ulcerans Agy99	4549654
YP_908369.1	CDS	MUL_5023	NC_008611.1	5569963	5570214	D	secreted protein; hypothetical protein	5569963..5570214	Mycobacterium ulcerans Agy99	4549655
YP_908370.1	CDS	hns	NC_008611.1	5570330	5570809	D	cytoplasmic protein; histone-like protein Hns	5570330..5570809	Mycobacterium ulcerans Agy99	4549656
YP_908371.1	CDS	menG	NC_008611.1	5570813	5571310	D	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA	5570813..5571310	Mycobacterium ulcerans Agy99	4549657
YP_908372.1	CDS	ethA	NC_008611.1	5571318	5572787	R	cytoplasmic protein; activates the pro-drug ethionamide (eth); induced eth sensitivity when overexpressed in mycobacterium tuberculosis.; monooxygenase EthA	complement(5571318..5572787)	Mycobacterium ulcerans Agy99	4549658
YP_908373.1	CDS	ethR	NC_008611.1	5572863	5573510	D	cytoplasmic protein; regulates negatively the production of EthA. induced eth resistance when overexpressed in mycobacterium tuberculosis.; TetR family transcriptional regulator	5572863..5573510	Mycobacterium ulcerans Agy99	4549659
YP_908374.1	CDS	dinP	NC_008611.1	5573452	5574741	D	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV	5573452..5574741	Mycobacterium ulcerans Agy99	4549660
YP_908375.1	CDS	MUL_5029	NC_008611.1	5574730	5575737	R	cytoplasmic protein; hypothetical protein	complement(5574730..5575737)	Mycobacterium ulcerans Agy99	4549661
YP_908376.1	CDS	MUL_5031	NC_008611.1	5576379	5576630	D	secreted protein; hypothetical protein	5576379..5576630	Mycobacterium ulcerans Agy99	4549663
YP_908377.1	CDS	mpt64	NC_008611.1	5576834	5577526	D	Also detected in the cytoplasm by proteomics.; secreted protein; immunogenic protein Mpt64	5576834..5577526	Mycobacterium ulcerans Agy99	4549664
YP_908378.1	CDS	MUL_5033	NC_008611.1	5577540	5578460	R	cytoplasmic protein; hypothetical protein	complement(5577540..5578460)	Mycobacterium ulcerans Agy99	4549665
YP_908379.1	CDS	MUL_5034	NC_008611.1	5578724	5579575	D	cytoplasmic protein; hypothetical protein	5578724..5579575	Mycobacterium ulcerans Agy99	4549666
YP_908380.1	CDS	MUL_5035	NC_008611.1	5579649	5579759	R	hypothetical protein	complement(5579649..5579759)	Mycobacterium ulcerans Agy99	4549667
YP_908381.1	CDS	gltD	NC_008611.1	5579943	5581409	R	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta	complement(5579943..5581409)	Mycobacterium ulcerans Agy99	4549668
YP_908382.1	CDS	gltB	NC_008611.1	5581402	5585985	R	cytoplasmic protein; probably involved in glutamate biosynthesis [catalytic activity: 2 L-glutamate + NADP(+) = L-glutamine + 2-oxoglutarate + NADPH]; ferredoxin-dependent glutamate synthase large subunit GltB	complement(5581402..5585985)	Mycobacterium ulcerans Agy99	4553624
YP_908383.1	CDS	MUL_5039	NC_008611.1	5587407	5588453	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5587407..5588453)	Mycobacterium ulcerans Agy99	4553627
YP_908384.1	CDS	MUL_5040	NC_008611.1	5588813	5590147	R	cytoplasmic protein; required for the transposition of the insertion element IS2606.; transposase for IS2606	complement(5588813..5590147)	Mycobacterium ulcerans Agy99	4553628
YP_908385.1	CDS	MUL_5045	NC_008611.1	5598784	5599680	R	membrane protein; hypothetical protein	complement(5598784..5599680)	Mycobacterium ulcerans Agy99	4553633
YP_908386.1	CDS	MUL_5046	NC_008611.1	5599703	5600749	R	cytoplasmic protein; required for the transposition of insertion element IS2404.; transposase for IS2404	complement(5599703..5600749)	Mycobacterium ulcerans Agy99	4553634
YP_908387.1	CDS	MUL_5048	NC_008611.1	5601360	5602235	R	cytoplasmic protein; hypothetical protein	complement(5601360..5602235)	Mycobacterium ulcerans Agy99	4553636
YP_908388.1	CDS	MUL_5049	NC_008611.1	5602769	5602996	D	cytoplasmic protein; hypothetical protein	5602769..5602996	Mycobacterium ulcerans Agy99	4553637
YP_908389.1	CDS	esxE	NC_008611.1	5606957	5607229	R	membrane protein; EsaT-6 like protein EsxE	complement(5606957..5607229)	Mycobacterium ulcerans Agy99	4553135
YP_908390.1	CDS	esxF	NC_008611.1	5607153	5607551	R	membrane protein; EsaT-6 like protein EsxF	complement(5607153..5607551)	Mycobacterium ulcerans Agy99	4553136
YP_908391.1	CDS	lppJ	NC_008611.1	5607662	5608150	R	membrane protein; lipoprotein LppJ	complement(5607662..5608150)	Mycobacterium ulcerans Agy99	4553137
YP_908392.1	CDS	MUL_5057	NC_008611.1	5608230	5610185	R	cytoplasmic protein; hypothetical protein	complement(5608230..5610185)	Mycobacterium ulcerans Agy99	4553138
YP_908393.1	CDS	MUL_5058	NC_008611.1	5610614	5610928	R	cytoplasmic protein; hypothetical protein	complement(5610614..5610928)	Mycobacterium ulcerans Agy99	4553139
YP_908394.1	CDS	pcnA	NC_008611.1	5611594	5613039	R	cytoplasmic protein; involved in transcription mechanism [catalytic activity: N ATP + (nucleotide)(M) = N diphosphate + (nucleotide)(M+N)]; poly(a) polymerase PcnA	complement(5611594..5613039)	Mycobacterium ulcerans Agy99	4553141
YP_908395.1	CDS	MUL_5061	NC_008611.1	5613205	5613951	D	cytoplasmic protein; hypothetical protein	5613205..5613951	Mycobacterium ulcerans Agy99	4553142
YP_908396.1	CDS	MUL_5062	NC_008611.1	5613978	5616329	D	secreted protein; hypothetical protein	5613978..5616329	Mycobacterium ulcerans Agy99	4553143
YP_908397.1	CDS	MUL_5063	NC_008611.1	5616446	5619988	D	Detected in the membrane fraction by proteomics (LC- MS/MS) Also detected in the cytoplasmic fraction by 2D-LC- MS/MS.; membrane protein; transmembrane protein	5616446..5619988	Mycobacterium ulcerans Agy99	4553144
YP_908398.1	CDS	sigM	NC_008611.1	5620050	5620637	D	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: in Mycobacterium bovis this protein has been shown to be active at high temperatures and during stationary phase; RNA polymerase sigma factor SigM	5620050..5620637	Mycobacterium ulcerans Agy99	4553145
YP_908399.1	CDS	MUL_5065	NC_008611.1	5620713	5621462	D	membrane protein; hypothetical protein	5620713..5621462	Mycobacterium ulcerans Agy99	4553146
YP_908400.1	CDS	trxB2	NC_008611.1	5621552	5622550	D	Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the extracellular matrix and membrane fraction by proteomics.; cytoplasmic protein; enzyme that catalyse the reduction of disulphides by pyridine nucleotides through an enzyme disulphide and a flavin. seems regulated by SigH. [catalytic activity: NADPH + oxidized thioredoxin = NADP(+) + reduced thioredoxin]; thioredoxin reductase TrxB2	5621552..5622550	Mycobacterium ulcerans Agy99	4553147
YP_908401.1	CDS	trxC	NC_008611.1	5622547	5622900	D	Detected in the cytoplamic, extracellular matrix and secreted fractions by proteomics.; cytoplasmic protein; thioredoxin participates in various redox reactions through the reversible oxidation of its active center dithiol, to a disulfide, & catalyzes dithiol-disulfide exchange reactions. forms together with thioredoxin reductase and NADPH a redox active system which donates electrons to a wide variety of different metabolic process (by similarity) seems regulated by SigH.; thioredoxin TrxC	5622547..5622900	Mycobacterium ulcerans Agy99	4553148
YP_908402.1	CDS	MUL_5068	NC_008611.1	5623032	5624252	D	cytoplasmic protein; function unknown, probably involved in cellular metabolism.; hydrolase	5623032..5624252	Mycobacterium ulcerans Agy99	4553149
YP_908403.1	CDS	MUL_5069	NC_008611.1	5624292	5625023	R	cytoplasmic protein; hypothetical protein	complement(5624292..5625023)	Mycobacterium ulcerans Agy99	4553150
YP_908404.1	CDS	parB	NC_008611.1	5625495	5626478	R	Detected in the membrane fraction by proteomics. Also detected in the cytoplasmic fraction by 2D-LC-MS/MS.; secreted protein; involved in chromosome partition. localize to both poles of the predivisional cell following completion of DNA replication. binds to the DNA origin of replication (by similarity); chromosome partitioning protein ParB	complement(5625495..5626478)	Mycobacterium ulcerans Agy99	4553151
YP_908405.1	CDS	parA	NC_008611.1	5626475	5627449	R	membrane protein; involved in chromosome partition. localize to both poles of the predivisional cell following completion of DNA replication (by similarity); chromosome partitioning protein ParA	complement(5626475..5627449)	Mycobacterium ulcerans Agy99	4553152
YP_908406.1	CDS	gid	NC_008611.1	5627780	5628292	R	cytoplasmic protein; glucose-inhibited division protein B Gid	complement(5627780..5628292)	Mycobacterium ulcerans Agy99	4551656
YP_908407.1	CDS	MUL_5073	NC_008611.1	5628445	5628993	R	domain identity suggests it is a Jag RNA-binding protein; Detected in the cytoplasmic fraction by 2D-LC- MS/MS. Also detected in the membrane fraction by proteomics (2D-LC-MS/MS); membrane protein; hypothetical protein	complement(5628445..5628993)	Mycobacterium ulcerans Agy99	4551657
YP_908408.1	CDS	MUL_5074	NC_008611.1	5629107	5630222	R	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC	complement(5629107..5630222)	Mycobacterium ulcerans Agy99	4551658
YP_908409.1	CDS	MUL_5075	NC_008611.1	5630206	5630514	R	cytoplasmic protein; hypothetical protein	complement(5630206..5630514)	Mycobacterium ulcerans Agy99	4551659
YP_908410.1	CDS	rnpA	NC_008611.1	5630541	5630903	R	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P	complement(5630541..5630903)	Mycobacterium ulcerans Agy99	4551660
YP_908411.1	CDS	rpmH	NC_008611.1	5630927	5631070	R	in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34	complement(5630927..5631070)	Mycobacterium ulcerans Agy99	4551661
MUL_0008	tRNA	ileT	NC_008611.1	10912	10988	D	tRNA-Ile	10912..10988	Mycobacterium ulcerans Agy99	4553252
MUL_0009	tRNA	alaT	NC_008611.1	11149	11224	D	tRNA-Ala	11149..11224	Mycobacterium ulcerans Agy99	4553253
MUL_0026	tRNA	leuT	NC_008611.1	28292	28377	D	tRNA-Leu	28292..28377	Mycobacterium ulcerans Agy99	4552753
MUL_0097	tRNA	serU	NC_008611.1	94684	94773	D	tRNA-Ser	94684..94773	Mycobacterium ulcerans Agy99	4549590
MUL_0461	tRNA	thrV	NC_008611.1	475461	475535	R	tRNA-Thr	complement(475461..475535)	Mycobacterium ulcerans Agy99	4552785
MUL_0530	tRNA	pheU	NC_008611.1	542140	542216	R	tRNA-Phe	complement(542140..542216)	Mycobacterium ulcerans Agy99	4552245
MUL_0531	tRNA	aspT	NC_008611.1	542244	542320	R	tRNA-Asp	complement(542244..542320)	Mycobacterium ulcerans Agy99	4552246
MUL_0532	tRNA	gluT	NC_008611.1	542355	542430	R	tRNA-Glu	complement(542355..542430)	Mycobacterium ulcerans Agy99	4552247
MUL_0533	tRNA	lysT	NC_008611.1	542554	542629	D	tRNA-Lys	542554..542629	Mycobacterium ulcerans Agy99	4552248
MUL_0553	tRNA	glyU	NC_008611.1	561885	561958	R	tRNA-Gly	complement(561885..561958)	Mycobacterium ulcerans Agy99	4550696
MUL_0672	tRNA	tyrT	NC_008611.1	698526	698611	D	tRNA-Tyr	698526..698611	Mycobacterium ulcerans Agy99	4553395
MUL_0717	tRNA	thrT	NC_008611.1	754590	754665	D	tRNA-Thr	754590..754665	Mycobacterium ulcerans Agy99	4552575
MUL_0718	tRNA	metT	NC_008611.1	754715	754791	D	tRNA-Met	754715..754791	Mycobacterium ulcerans Agy99	4552576
MUL_0723	tRNA	trpT	NC_008611.1	756607	756682	D	tRNA-Trp	756607..756682	Mycobacterium ulcerans Agy99	4552581
MUL_1312	tRNA	valV	NC_008611.1	1410815	1410889	D	tRNA-Val	1410815..1410889	Mycobacterium ulcerans Agy99	4550725
MUL_1461	tRNA	asnT	NC_008611.1	1579597	1579672	D	tRNA-Asn	1579597..1579672	Mycobacterium ulcerans Agy99	4552459
MUL_1607	tRNA	leuV	NC_008611.1	1743563	1743639	R	tRNA-Leu	complement(1743563..1743639)	Mycobacterium ulcerans Agy99	4552093
MUL_1958	tRNA	glnU	NC_008611.1	2164284	2164358	D	tRNA-Gln	2164284..2164358	Mycobacterium ulcerans Agy99	4551265
MUL_1959	tRNA	gluU	NC_008611.1	2164428	2164503	D	tRNA-Glu	2164428..2164503	Mycobacterium ulcerans Agy99	4551266
MUL_2374	tRNA	leuU	NC_008611.1	2661544	2661632	D	tRNA-Leu	2661544..2661632	Mycobacterium ulcerans Agy99	4550414
MUL_2503	tRNA	metU	NC_008611.1	2794808	2794884	R	tRNA-Phe	complement(2794808..2794884)	Mycobacterium ulcerans Agy99	4550248
MUL_3231	tRNA	proT	NC_008611.1	3606913	3606989	R	tRNA-Pro	complement(3606913..3606989)	Mycobacterium ulcerans Agy99	4554208
MUL_3293	tRNA	valT	NC_008611.1	3668654	3668728	R	tRNA-Val	complement(3668654..3668728)	Mycobacterium ulcerans Agy99	4554288
MUL_3294	tRNA	glyT	NC_008611.1	3668899	3668974	D	tRNA-Gly	3668899..3668974	Mycobacterium ulcerans Agy99	4554289
MUL_3295	tRNA	cysU	NC_008611.1	3669001	3669074	D	tRNA-Cys	3669001..3669074	Mycobacterium ulcerans Agy99	4554290
MUL_3296	tRNA	valU	NC_008611.1	3669090	3669164	D	tRNA-Val	3669090..3669164	Mycobacterium ulcerans Agy99	4554291
MUL_3441	tRNA	alaU	NC_008611.1	3818273	3818348	R	tRNA-Ala	complement(3818273..3818348)	Mycobacterium ulcerans Agy99	4554491
MUL_3580	tRNA	metV	NC_008611.1	3971557	3971633	D	tRNA-Met	3971557..3971633	Mycobacterium ulcerans Agy99	4553414
MUL_3733	tRNA	proU	NC_008611.1	4164789	4164865	R	tRNA-Pro	complement(4164789..4164865)	Mycobacterium ulcerans Agy99	4552942
MUL_3734	tRNA	glyV	NC_008611.1	4165030	4165103	D	tRNA-Gly	4165030..4165103	Mycobacterium ulcerans Agy99	4552943
MUL_3767	tRNA	argW	NC_008611.1	4206143	4206219	D	tRNA-Arg	4206143..4206219	Mycobacterium ulcerans Agy99	4549733
MUL_3791	tRNA	hisT	NC_008611.1	4232461	4232536	D	tRNA-His	4232461..4232536	Mycobacterium ulcerans Agy99	4554334
MUL_3806	tRNA	lysU	NC_008611.1	4246228	4246302	D	tRNA-Lys	4246228..4246302	Mycobacterium ulcerans Agy99	4554349
MUL_3903	tRNA	leuW	NC_008611.1	4362302	4362388	R	tRNA-Leu	complement(4362302..4362388)	Mycobacterium ulcerans Agy99	4553719
MUL_3973	tRNA	argV	NC_008611.1	4439106	4439181	D	tRNA-Arg	4439106..4439181	Mycobacterium ulcerans Agy99	4551397
MUL_4219	tRNA	thrU	NC_008611.1	4690811	4690886	R	tRNA-Thr	complement(4690811..4690886)	Mycobacterium ulcerans Agy99	4551230
MUL_4260	tRNA	proY	NC_008611.1	4732665	4732741	D	tRNA-Pro	4732665..4732741	Mycobacterium ulcerans Agy99	4551251
MUL_4317	tRNA	serV	NC_008611.1	4792772	4792860	D	tRNA-Ser	4792772..4792860	Mycobacterium ulcerans Agy99	4551320
MUL_4369	tRNA	serX	NC_008611.1	4850647	4850736	R	tRNA-Ser	complement(4850647..4850736)	Mycobacterium ulcerans Agy99	4550408
MUL_4405	tRNA	argU	NC_008611.1	4887378	4887453	R	tRNA-Arg	complement(4887378..4887453)	Mycobacterium ulcerans Agy99	4549888
MUL_4406	tRNA	serT	NC_008611.1	4887483	4887574	R	tRNA-Ser	complement(4887483..4887574)	Mycobacterium ulcerans Agy99	4549889
MUL_4448	tRNA	argT	NC_008611.1	4934267	4934342	D	tRNA-Arg	4934267..4934342	Mycobacterium ulcerans Agy99	4550236
MUL_4618	tRNA	leuX	NC_008611.1	5119865	5119941	R	tRNA-Leu	complement(5119865..5119941)	Mycobacterium ulcerans Agy99	4552227
MUL_4636	tRNA	glnT	NC_008611.1	5137336	5137410	D	tRNA-Gln	5137336..5137410	Mycobacterium ulcerans Agy99	4550807
MUL_4689	tRNA	alaV	NC_008611.1	5194291	5194366	R	tRNA-Ala	complement(5194291..5194366)	Mycobacterium ulcerans Agy99	4554376
MUL_3947	rRNA	rrf	NC_008611.1	4409817	4409932	R	5S ribosomal RNA	complement(4409817..4409932)	Mycobacterium ulcerans Agy99	4552514
MUL_3948	rRNA	rrl	NC_008611.1	4410027	4413125	R	23S ribosomal RNA	complement(join(4410027..4411532,4411590..4413125))	Mycobacterium ulcerans Agy99	4552515
MUL_3949	rRNA	rrs	NC_008611.1	4413402	4414940	R	16S ribosomal RNA	complement(4413402..4414940)	Mycobacterium ulcerans Agy99	4552516