-- dump date   	20140619_161023
-- class       	Genbank::Feature
-- table       	feature
-- table       	main
-- field 1	id
-- field 2	type
-- field 3	name
-- field 4	contig
-- field 5	start_pos
-- field 6	end_pos
-- field 7	strand
-- field 8	description
-- field 9	chrom_position
-- field 10	organism
-- field 11	GeneID
-- header
-- id	type	name	contig	start_pos	end_pos	strand	description	chrom_position	organism	GeneID
262719000001	SEQ_END	SEQ_END	NC_007295.1	897405	897405	DR	NC_007295.1; contig end	897405..897405	Mycoplasma hyopneumoniae J	<NULL_VALUE>
YP_278806.1	CDS	dnaA	NC_007295.1	198	1598	D	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA	198..1598	Mycoplasma hyopneumoniae J	3563901
YP_278807.1	CDS	dnaN	NC_007295.1	1743	2879	D	identified by sequence similarity; ORF located using Blastx; COG0592; DNA polymerase III subunit beta	1743..2879	Mycoplasma hyopneumoniae J	3563902
YP_278808.1	CDS	gidA	NC_007295.1	3010	4842	D	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	3010..4842	Mycoplasma hyopneumoniae J	3563903
YP_278809.1	CDS	MHJ_0004	NC_007295.1	4854	5300	D	identified by sequence similarity; ORF located using Blastx; COG1576; hypothetical protein	4854..5300	Mycoplasma hyopneumoniae J	3563904
YP_278810.1	CDS	MHJ_0005	NC_007295.1	5314	6297	D	identified by sequence similarity; ORF located using Blastx; COG0618; MgpA like-protein	5314..6297	Mycoplasma hyopneumoniae J	3563905
YP_278811.1	CDS	MHJ_0006	NC_007295.1	6299	7261	D	identified by sequence similarity; ORF located using Blastx; COG0618; DHH family phosphoesterase	6299..7261	Mycoplasma hyopneumoniae J	3563906
YP_278812.1	CDS	MHJ_0007	NC_007295.1	7289	7933	D	hypothetical protein	7289..7933	Mycoplasma hyopneumoniae J	3563650
YP_278813.1	CDS	ftsY	NC_007295.1	8023	9024	D	identified by sequence similarity; ORF located using Blastx; COG0552; cell division protein ftsY	8023..9024	Mycoplasma hyopneumoniae J	3563651
YP_278814.1	CDS	MHJ_0009	NC_007295.1	9190	11214	D	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG0595; hypothetical protein	9190..11214	Mycoplasma hyopneumoniae J	3563652
YP_278815.1	CDS	hrcA	NC_007295.1	11299	12306	D	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor	11299..12306	Mycoplasma hyopneumoniae J	3563653
YP_278816.1	CDS	grpE	NC_007295.1	12303	13055	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0576; heat shock protein	12303..13055	Mycoplasma hyopneumoniae J	3563654
YP_278817.1	CDS	argS	NC_007295.1	13039	14643	D	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase	13039..14643	Mycoplasma hyopneumoniae J	3563655
YP_278818.1	CDS	MHJ_0013	NC_007295.1	14648	14893	D	hypothetical protein	14648..14893	Mycoplasma hyopneumoniae J	3563656
YP_278819.1	CDS	fba	NC_007295.1	14966	15829	D	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG0191; fructose-bisphosphate aldolase	14966..15829	Mycoplasma hyopneumoniae J	3563657
YP_278820.1	CDS	rluC	NC_007295.1	15836	16681	D	identified by sequence similarity; ORF located using Blastx; COG0564; ribosomal large subunit pseudouridine synthase C	15836..16681	Mycoplasma hyopneumoniae J	3563658
YP_278821.1	CDS	MHJ_0016	NC_007295.1	16715	17026	R	hypothetical protein	complement(16715..17026)	Mycoplasma hyopneumoniae J	3563659
YP_278822.1	CDS	MHJ_0017	NC_007295.1	17416	17658	R	hypothetical protein	complement(17416..17658)	Mycoplasma hyopneumoniae J	3563684
YP_278823.1	CDS	MHJ_0018	NC_007295.1	17804	20071	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1136; TC:3.A.1.123.3; ABC transporter ATP-binding protein	complement(17804..20071)	Mycoplasma hyopneumoniae J	3563934
YP_278824.1	CDS	MHJ_0019	NC_007295.1	20265	22505	R	identified by sequence similarity; ORF located using Blastx; COG1136; TC:3.A.1.123.3; ABC transporter ATP-binding protein	complement(20265..22505)	Mycoplasma hyopneumoniae J	3563935
YP_278825.1	CDS	MHJ_0020	NC_007295.1	22579	24906	R	identified by sequence similarity; ORF located using Blastx; COG1136; TC:3.A.1.123.4; ABC transporter ATP-binding protein	complement(22579..24906)	Mycoplasma hyopneumoniae J	3563936
YP_278826.1	CDS	MHJ_0021	NC_007295.1	24893	25570	R	hypothetical protein	complement(24893..25570)	Mycoplasma hyopneumoniae J	3563937
YP_278827.1	CDS	sipS	NC_007295.1	26074	26514	D	identified by sequence similarity; ORF located using Blastx; COG0681; signal peptidase I	26074..26514	Mycoplasma hyopneumoniae J	3563938
YP_278828.1	CDS	gatC	NC_007295.1	26677	27009	D	identified by sequence similarity; ORF located using Blastx; COG0721; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	26677..27009	Mycoplasma hyopneumoniae J	3563939
YP_278829.1	CDS	gatA	NC_007295.1	26999	28321	D	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase	26999..28321	Mycoplasma hyopneumoniae J	3563940
YP_278830.1	CDS	gatB	NC_007295.1	28314	29714	D	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B	28314..29714	Mycoplasma hyopneumoniae J	3563941
YP_278831.1	CDS	MHJ_0026	NC_007295.1	29945	30454	D	hypothetical protein	29945..30454	Mycoplasma hyopneumoniae J	3563942
YP_278832.1	CDS	lsp	NC_007295.1	30571	31098	R	identified by sequence similarity; ORF located using Blastx; COG0597; lipoprotein signal peptidase	complement(30571..31098)	Mycoplasma hyopneumoniae J	3563542
YP_278833.1	CDS	ileS	NC_007295.1	31142	33805	R	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase	complement(31142..33805)	Mycoplasma hyopneumoniae J	3563614
YP_278834.1	CDS	parC	NC_007295.1	33802	36342	R	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A	complement(33802..36342)	Mycoplasma hyopneumoniae J	3563615
YP_278835.1	CDS	parE	NC_007295.1	36335	38263	R	identified by sequence similarity; ORF located using Blastx; COG0187; topoisomerase IV subunit B	complement(36335..38263)	Mycoplasma hyopneumoniae J	3563616
YP_278836.1	CDS	gap	NC_007295.1	38473	39483	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0057; glyceraldehyde 3-phosphate dehydrogenase	38473..39483	Mycoplasma hyopneumoniae J	3563617
YP_278837.1	CDS	MHJ_0032	NC_007295.1	39582	41576	D	hypothetical protein	39582..41576	Mycoplasma hyopneumoniae J	3563618
YP_278838.1	CDS	vacB	NC_007295.1	41677	43755	R	identified by sequence similarity; ORF located using Blastx; COG0557; VACB-like ribonuclease II	complement(41677..43755)	Mycoplasma hyopneumoniae J	3563619
YP_278839.1	CDS	cls	NC_007295.1	44054	45592	R	identified by sequence similarity; ORF located using Blastx; COG1502; cardiolipin synthetase	complement(44054..45592)	Mycoplasma hyopneumoniae J	3563620
YP_278840.1	CDS	recA	NC_007295.1	45597	46586	R	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A	complement(45597..46586)	Mycoplasma hyopneumoniae J	3563621
YP_278841.1	CDS	licA	NC_007295.1	46817	47572	D	identified by sequence similarity; ORF located using Blastx; COG0510; PTS system lichenan-specific transporter subunit IIA	46817..47572	Mycoplasma hyopneumoniae J	3563543
YP_278842.1	CDS	obgE	NC_007295.1	47574	48833	D	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE	47574..48833	Mycoplasma hyopneumoniae J	3563751
YP_278843.1	CDS	MHJ_0038	NC_007295.1	48936	49289	D	hypothetical protein	48936..49289	Mycoplasma hyopneumoniae J	3563622
YP_278844.1	CDS	MHJ_0039	NC_007295.1	49293	50501	D	hypothetical protein	49293..50501	Mycoplasma hyopneumoniae J	3563623
YP_278845.1	CDS	MHJ_0040	NC_007295.1	50503	50928	D	hypothetical protein	50503..50928	Mycoplasma hyopneumoniae J	3563624
YP_278846.1	CDS	dinP	NC_007295.1	50955	52130	D	identified by sequence similarity; ORF located using Blastx; COG0389; DNA polymerase IV	50955..52130	Mycoplasma hyopneumoniae J	3563625
YP_278847.1	CDS	MHJ_0042	NC_007295.1	52135	52566	D	hypothetical protein	52135..52566	Mycoplasma hyopneumoniae J	3563626
YP_278848.1	CDS	atpB	NC_007295.1	52563	53294	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A	52563..53294	Mycoplasma hyopneumoniae J	3563627
YP_278849.1	CDS	atpE	NC_007295.1	53322	53627	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C	53322..53627	Mycoplasma hyopneumoniae J	3563628
YP_278850.1	CDS	atpF	NC_007295.1	53657	54247	D	identified by sequence similarity; ORF located using Blastx; COG0711; ATP synthase subunit B	53657..54247	Mycoplasma hyopneumoniae J	3563629
YP_278851.1	CDS	atpH	NC_007295.1	54253	54810	D	produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta	54253..54810	Mycoplasma hyopneumoniae J	3563759
YP_278852.1	CDS	atpA-1	NC_007295.1	54826	56352	D	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha	54826..56352	Mycoplasma hyopneumoniae J	3563760
YP_278853.1	CDS	atpG	NC_007295.1	56381	57211	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0224; ATP synthase subunit gamma	56381..57211	Mycoplasma hyopneumoniae J	3563761
YP_278854.1	CDS	atpD	NC_007295.1	57229	58644	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta	57229..58644	Mycoplasma hyopneumoniae J	3563762
YP_278855.1	CDS	recU	NC_007295.1	59000	59485	D	functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease	59000..59485	Mycoplasma hyopneumoniae J	3563763
YP_278856.1	CDS	rpsB	NC_007295.1	59762	60664	D	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2	59762..60664	Mycoplasma hyopneumoniae J	3563764
YP_278857.1	CDS	tsf	NC_007295.1	60695	61606	D	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts	60695..61606	Mycoplasma hyopneumoniae J	3563765
YP_278858.1	CDS	ffh	NC_007295.1	61691	63013	D	identified by sequence similarity; ORF located using Blastx; COG0541; TC:3.A.5.1.1; signal recognition particle protein	61691..63013	Mycoplasma hyopneumoniae J	3563766
YP_278859.1	CDS	glyS	NC_007295.1	63038	64408	D	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase	63038..64408	Mycoplasma hyopneumoniae J	3563767
YP_278860.1	CDS	dnaG	NC_007295.1	64401	66242	D	identified by sequence similarity; ORF located using Blastx; COG0358; DNA primase	64401..66242	Mycoplasma hyopneumoniae J	3563768
YP_278861.1	CDS	rpoD	NC_007295.1	66824	68293	D	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor	66824..68293	Mycoplasma hyopneumoniae J	3563769
YP_278862.1	CDS	MHJ_0057	NC_007295.1	68300	69073	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0327; hypothetical protein	68300..69073	Mycoplasma hyopneumoniae J	3563770
YP_278863.1	CDS	nfo	NC_007295.1	69067	69897	D	Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV	69067..69897	Mycoplasma hyopneumoniae J	3563771
YP_278864.1	CDS	tyrS	NC_007295.1	69913	71157	D	identified by sequence similarity; ORF located using Blastx; COG0162; tyrosyl tRNA synthetase	69913..71157	Mycoplasma hyopneumoniae J	3563772
YP_278865.1	CDS	MHJ_0060	NC_007295.1	71564	75931	D	identified by sequence similarity; ORF located using Blastx; COG1112; hypothetical protein	71564..75931	Mycoplasma hyopneumoniae J	3563773
YP_278866.1	CDS	MHJ_0061	NC_007295.1	76174	78882	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	76174..78882	Mycoplasma hyopneumoniae J	3563774
YP_278867.1	CDS	uvrC	NC_007295.1	78940	80457	R	identified by sequence similarity; ORF located using Blastx; COG0322; excinuclease ABC subunit C	complement(78940..80457)	Mycoplasma hyopneumoniae J	3563775
YP_278868.1	CDS	dnaK	NC_007295.1	81104	82906	D	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK	81104..82906	Mycoplasma hyopneumoniae J	3563776
YP_278869.1	CDS	dnaJ	NC_007295.1	83117	84241	D	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG0484; molecular chaperone DnaJ	83117..84241	Mycoplasma hyopneumoniae J	3563777
YP_278870.1	CDS	cmk	NC_007295.1	84300	84989	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0283; cytidylate kinase	84300..84989	Mycoplasma hyopneumoniae J	3563747
YP_278871.1	CDS	engA	NC_007295.1	85004	86308	D	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA	85004..86308	Mycoplasma hyopneumoniae J	3563482
YP_278872.1	CDS	himA	NC_007295.1	86342	86632	D	identified by sequence similarity; ORF located using Blastx; COG0776; nucleoid DNA-binding protein	86342..86632	Mycoplasma hyopneumoniae J	3563483
YP_278873.1	CDS	MHJ_0068	NC_007295.1	86635	86865	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	86635..86865	Mycoplasma hyopneumoniae J	3563484
YP_278874.1	CDS	lepA	NC_007295.1	86866	88662	D	binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA	86866..88662	Mycoplasma hyopneumoniae J	3563485
YP_278875.1	CDS	MHJ_0070	NC_007295.1	88724	89680	D	hypothetical protein	88724..89680	Mycoplasma hyopneumoniae J	3563486
YP_278876.1	CDS	fusA	NC_007295.1	89995	92082	R	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G	complement(89995..92082)	Mycoplasma hyopneumoniae J	3563487
YP_278877.1	CDS	rpsG	NC_007295.1	92092	92562	R	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7	complement(92092..92562)	Mycoplasma hyopneumoniae J	3563488
YP_278878.1	CDS	rpsL	NC_007295.1	92614	93033	R	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12	complement(92614..93033)	Mycoplasma hyopneumoniae J	3563489
YP_278879.1	CDS	MHJ_0074	NC_007295.1	93164	93544	R	hypothetical protein	complement(93164..93544)	Mycoplasma hyopneumoniae J	3563490
YP_278880.1	CDS	MHJ_0075	NC_007295.1	93548	94039	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(93548..94039)	Mycoplasma hyopneumoniae J	3563491
YP_278881.1	CDS	MHJ_0076	NC_007295.1	94051	94533	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(94051..94533)	Mycoplasma hyopneumoniae J	3563492
YP_278882.1	CDS	MHJ_0077	NC_007295.1	94816	96162	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0531; TC:2.A.3.6.1; amino acid permease	94816..96162	Mycoplasma hyopneumoniae J	3563493
YP_278883.1	CDS	nox	NC_007295.1	96377	97759	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0446; TC:3.D.1.1.1; NADH oxidase	96377..97759	Mycoplasma hyopneumoniae J	3563494
YP_278884.1	CDS	deoA	NC_007295.1	97947	99230	R	identified by sequence similarity; ORF located using Blastx; COG0213; thymidine phosphorylase	complement(97947..99230)	Mycoplasma hyopneumoniae J	3563495
YP_278885.1	CDS	deoD	NC_007295.1	99235	99933	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0813; purine-nucleoside phosphorylase	complement(99235..99933)	Mycoplasma hyopneumoniae J	3563496
YP_278886.1	CDS	MHJ_0081	NC_007295.1	100022	100492	R	hypothetical protein	complement(100022..100492)	Mycoplasma hyopneumoniae J	3563497
YP_278887.2	CDS	secA	NC_007295.1	100649	103600	R	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA	complement(100649..103600)	Mycoplasma hyopneumoniae J	3563498
YP_278888.1	CDS	rbgA	NC_007295.1	104867	105685	D	essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase	104867..105685	Mycoplasma hyopneumoniae J	3563868
YP_278889.1	CDS	MHJ_0084	NC_007295.1	105969	107405	R	hypothetical protein	complement(105969..107405)	Mycoplasma hyopneumoniae J	3563869
YP_278890.1	CDS	MHJ_0085	NC_007295.1	107443	109581	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1404; subtilisin-like serine protease	complement(107443..109581)	Mycoplasma hyopneumoniae J	3563870
YP_278891.1	CDS	MHJ_0086	NC_007295.1	109801	110076	D	hypothetical protein	109801..110076	Mycoplasma hyopneumoniae J	3563871
YP_278892.1	CDS	MHJ_0087	NC_007295.1	110173	111066	D	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	110173..111066	Mycoplasma hyopneumoniae J	3563686
YP_278893.1	CDS	uvrA	NC_007295.1	111446	114259	R	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A	complement(111446..114259)	Mycoplasma hyopneumoniae J	3563687
YP_278894.1	CDS	MHJ_0089	NC_007295.1	114282	116720	R	identified by sequence similarity; ORF located using Blastx; COG0595; hypothetical protein	complement(114282..116720)	Mycoplasma hyopneumoniae J	3563688
YP_278895.1	CDS	MHJ_0090	NC_007295.1	116928	117287	R	hypothetical protein	complement(116928..117287)	Mycoplasma hyopneumoniae J	3563849
YP_278896.1	CDS	MHJ_0091	NC_007295.1	117398	118981	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG4487; hypothetical protein	117398..118981	Mycoplasma hyopneumoniae J	3563850
YP_278897.1	CDS	MHJ_0092	NC_007295.1	119004	119591	R	hypothetical protein	complement(119004..119591)	Mycoplasma hyopneumoniae J	3563851
YP_278898.1	CDS	tpx	NC_007295.1	119960	120454	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG2077; thiol peroxidase	119960..120454	Mycoplasma hyopneumoniae J	3563852
YP_278899.1	CDS	lgt	NC_007295.1	121028	121966	D	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase	121028..121966	Mycoplasma hyopneumoniae J	3563907
YP_278900.1	CDS	trxB	NC_007295.1	122125	123042	D	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG0492; thioredoxin reductase	122125..123042	Mycoplasma hyopneumoniae J	3563863
YP_278901.1	CDS	MHJ_0096	NC_007295.1	123067	126501	D	identified by sequence similarity; ORF located using Blastx; outer membrane protein - P95	123067..126501	Mycoplasma hyopneumoniae J	3563392
YP_278902.1	CDS	MHJ_0097	NC_007295.1	126600	129440	D	hypothetical protein	126600..129440	Mycoplasma hyopneumoniae J	3563431
YP_278903.1	CDS	clpB	NC_007295.1	129445	131628	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0542; ATP-dependent protease binding protein	complement(129445..131628)	Mycoplasma hyopneumoniae J	3563432
YP_278904.1	CDS	tpiA	NC_007295.1	131706	132434	D	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase	131706..132434	Mycoplasma hyopneumoniae J	3563433
YP_278905.1	CDS	rpsO	NC_007295.1	132553	132819	D	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15	132553..132819	Mycoplasma hyopneumoniae J	3563434
YP_278906.1	CDS	MHJ_0103	NC_007295.1	136543	137142	R	hypothetical protein	complement(136543..137142)	Mycoplasma hyopneumoniae J	3563437
YP_278907.1	CDS	MHJ_0104	NC_007295.1	137369	140218	R	copy 2; identified by sequence similarity; ORF located using Blastx; protein P102	complement(137369..140218)	Mycoplasma hyopneumoniae J	3563438
YP_278908.1	CDS	MHJ_0105	NC_007295.1	140239	143355	R	copy 2; identified by sequence similarity; ORF located using Blastx; protein P97	complement(140239..143355)	Mycoplasma hyopneumoniae J	3563439
YP_278909.1	CDS	gyrB	NC_007295.1	143633	145552	R	identified by sequence similarity; ORF located using GeneMark; Blastx; COG0187; DNA gyrase subunit B	complement(143633..145552)	Mycoplasma hyopneumoniae J	3563440
YP_278910.1	CDS	pfkA	NC_007295.1	146026	146994	R	identified by sequence similarity; ORF located using Blastx; COG0205; 6-phosphofructokinase	complement(146026..146994)	Mycoplasma hyopneumoniae J	3563441
YP_278911.1	CDS	MHJ_0108	NC_007295.1	147439	148662	D	hypothetical protein	147439..148662	Mycoplasma hyopneumoniae J	3563442
YP_278912.1	CDS	MHJ_0109	NC_007295.1	148726	150336	D	identified by sequence similarity; ORF located using Blastx; COG0531; TC:2.A.3.8.7; amino acid permease	148726..150336	Mycoplasma hyopneumoniae J	3563443
YP_278913.1	CDS	apt	NC_007295.1	150355	150864	D	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase	150355..150864	Mycoplasma hyopneumoniae J	3563444
YP_278914.1	CDS	pdhA	NC_007295.1	151054	152178	D	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG1071; pyruvate dehydrogenase E1-alpha subunit	151054..152178	Mycoplasma hyopneumoniae J	3563592
YP_278915.1	CDS	pdhB	NC_007295.1	152178	153182	D	identified by sequence similarity; ORF located using GeneMark; Blastx; COG0022; pyruvate dehydrogenase	152178..153182	Mycoplasma hyopneumoniae J	3563593
YP_278916.1	CDS	MHJ_0113	NC_007295.1	154016	154843	D	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	154016..154843	Mycoplasma hyopneumoniae J	3563594
YP_278917.1	CDS	MHJ_0114	NC_007295.1	154852	155601	D	hypothetical protein	154852..155601	Mycoplasma hyopneumoniae J	3563595
YP_278918.1	CDS	MHJ_0115	NC_007295.1	155691	156134	R	hypothetical protein	complement(155691..156134)	Mycoplasma hyopneumoniae J	3563596
YP_278919.1	CDS	MHJ_0116	NC_007295.1	156385	157257	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0542; hypothetical protein	156385..157257	Mycoplasma hyopneumoniae J	3563597
YP_278920.1	CDS	MHJ_0117	NC_007295.1	157262	157927	D	hypothetical protein	157262..157927	Mycoplasma hyopneumoniae J	3563598
YP_278921.1	CDS	rpmB	NC_007295.1	158092	158286	R	required for 70S ribosome assembly; 50S ribosomal protein L28	complement(158092..158286)	Mycoplasma hyopneumoniae J	3563599
YP_278922.1	CDS	rplT	NC_007295.1	158342	158695	R	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20	complement(158342..158695)	Mycoplasma hyopneumoniae J	3563600
YP_278923.2	CDS	rpmI	NC_007295.1	158740	158934	R	identified by sequence similarity; ORF located using Blastx; COG0291; 50S ribosomal protein L35	complement(158740..158934)	Mycoplasma hyopneumoniae J	3563601
YP_278924.1	CDS	infC	NC_007295.1	158927	159583	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0290; translation initiation factor IF-3	complement(158927..159583)	Mycoplasma hyopneumoniae J	3563602
YP_278925.1	CDS	pyk	NC_007295.1	159810	161237	R	catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase	complement(159810..161237)	Mycoplasma hyopneumoniae J	3563603
YP_278926.1	CDS	MHJ_0123	NC_007295.1	161342	162145	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(161342..162145)	Mycoplasma hyopneumoniae J	3563672
YP_278927.1	CDS	MHJ_0124	NC_007295.1	162190	162483	D	hypothetical protein	162190..162483	Mycoplasma hyopneumoniae J	3563673
YP_278928.1	CDS	MHJ_0125	NC_007295.1	162512	163582	R	identified by sequence similarity; ORF located using Blastx; COG1363; aminopeptidase	complement(162512..163582)	Mycoplasma hyopneumoniae J	3563674
YP_278929.1	CDS	ung	NC_007295.1	163634	164302	R	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase	complement(163634..164302)	Mycoplasma hyopneumoniae J	3563675
YP_278930.1	CDS	rplU	NC_007295.1	164443	164742	D	identified by sequence similarity; ORF located using Blastx; COG0261; 50S ribosomal protein L21	164443..164742	Mycoplasma hyopneumoniae J	3563676
YP_278931.1	CDS	rpmA	NC_007295.1	164751	165005	D	involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27	164751..165005	Mycoplasma hyopneumoniae J	3563677
YP_278932.1	CDS	lip2	NC_007295.1	165262	166059	R	identified by sequence similarity; ORF located using Blastx; COG0596; lipase/esterase	complement(165262..166059)	Mycoplasma hyopneumoniae J	3563678
YP_278933.1	CDS	MHJ_0131	NC_007295.1	166362	167441	D	hypothetical protein	166362..167441	Mycoplasma hyopneumoniae J	3563576
YP_278934.1	CDS	MHJ_0132	NC_007295.1	167674	169113	D	identified by sequence similarity; ORF located using Blastx; COG0477; hexosephosphate transport protein	167674..169113	Mycoplasma hyopneumoniae J	3563577
YP_278935.1	CDS	ldh	NC_007295.1	169238	170185	D	identified by sequence similarity; ORF located using Blastx; COG0039; L-lactate dehydrogenase	169238..170185	Mycoplasma hyopneumoniae J	3563578
YP_278936.1	CDS	MHJ_0134	NC_007295.1	170434	173385	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	170434..173385	Mycoplasma hyopneumoniae J	3563579
YP_278937.1	CDS	prfA	NC_007295.1	173453	174538	D	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1	173453..174538	Mycoplasma hyopneumoniae J	3563580
YP_278938.1	CDS	hemK	NC_007295.1	174531	175241	D	identified by sequence similarity; ORF located using Blastx; COG2890; protoporphirogen oxidase	174531..175241	Mycoplasma hyopneumoniae J	3563581
YP_278939.1	CDS	gltX	NC_007295.1	175299	176705	D	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase	175299..176705	Mycoplasma hyopneumoniae J	3563582
YP_278940.1	CDS	MHJ_0138	NC_007295.1	176720	177115	D	hypothetical protein	176720..177115	Mycoplasma hyopneumoniae J	3563583
YP_278941.1	CDS	MHJ_0139	NC_007295.1	177192	177632	D	identified by sequence similarity; ORF located using Blastx; COG0219; tRNA/rRNA methyltransferase	177192..177632	Mycoplasma hyopneumoniae J	3563584
YP_278942.1	CDS	MHJ_0140	NC_007295.1	177628	178377	D	identified by sequence similarity; ORF located using Blastx; COG0566; tRNA/rRNA methyltransferase	177628..178377	Mycoplasma hyopneumoniae J	3563585
YP_278943.1	CDS	MHJ_0141	NC_007295.1	178523	179122	D	identified by sequence similarity; ORF located using Blastx; COG2059; TC:2.A.51.1.2; chromate transport protein	178523..179122	Mycoplasma hyopneumoniae J	3563586
YP_278944.1	CDS	MHJ_0142	NC_007295.1	179106	179756	D	identified by sequence similarity; ORF located using Blastx; COG2059; chromate transport protein	179106..179756	Mycoplasma hyopneumoniae J	3563587
YP_278945.1	CDS	MHJ_0143	NC_007295.1	179766	180578	D	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	179766..180578	Mycoplasma hyopneumoniae J	3563588
YP_278946.1	CDS	MHJ_0144	NC_007295.1	180594	181829	D	identified by sequence similarity; ORF located using Blastx; COG1281; hypothetical protein	180594..181829	Mycoplasma hyopneumoniae J	3563589
YP_278947.1	CDS	tig	NC_007295.1	182043	183422	D	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor	182043..183422	Mycoplasma hyopneumoniae J	3563590
YP_278948.1	CDS	MHJ_0146	NC_007295.1	183472	183990	R	hypothetical protein	complement(183472..183990)	Mycoplasma hyopneumoniae J	3563591
YP_278949.1	CDS	rpe	NC_007295.1	184003	184641	R	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase	complement(184003..184641)	Mycoplasma hyopneumoniae J	3563928
YP_278950.1	CDS	MHJ_0148	NC_007295.1	184634	185491	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1162; hypothetical protein	complement(184634..185491)	Mycoplasma hyopneumoniae J	3563929
YP_278951.1	CDS	gmk	NC_007295.1	185492	186085	R	Essential for recycling GMP and indirectly, cGMP; guanylate kinase	complement(185492..186085)	Mycoplasma hyopneumoniae J	3563930
YP_278952.1	CDS	MHJ_0150	NC_007295.1	186066	186626	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0742; DNA methylase	complement(186066..186626)	Mycoplasma hyopneumoniae J	3563931
YP_278953.1	CDS	MHJ_0151	NC_007295.1	186653	187333	R	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	complement(186653..187333)	Mycoplasma hyopneumoniae J	3563932
YP_278954.1	CDS	era	NC_007295.1	187813	188694	R	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era	complement(187813..188694)	Mycoplasma hyopneumoniae J	3563933
YP_278955.1	CDS	cdd	NC_007295.1	188701	189096	R	identified by sequence similarity; ORF located using Blastx; COG0295; cytidine deaminase	complement(188701..189096)	Mycoplasma hyopneumoniae J	3563667
YP_278956.1	CDS	MHJ_0154	NC_007295.1	189096	189548	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0319; hypothetical protein	complement(189096..189548)	Mycoplasma hyopneumoniae J	3563668
YP_278957.1	CDS	MHJ_0155	NC_007295.1	189566	189919	R	hypothetical protein	complement(189566..189919)	Mycoplasma hyopneumoniae J	3563669
YP_278958.1	CDS	MHJ_0156	NC_007295.1	189921	191960	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG2274; TC:3.A.1.112.4; ABC transporter ATP-binding and permease	complement(189921..191960)	Mycoplasma hyopneumoniae J	3563685
YP_278959.1	CDS	deoB	NC_007295.1	192038	193234	D	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase	192038..193234	Mycoplasma hyopneumoniae J	3563917
YP_278960.1	CDS	MHJ_0158	NC_007295.1	193562	194161	D	hypothetical protein	193562..194161	Mycoplasma hyopneumoniae J	3563918
YP_278961.1	CDS	tlyA	NC_007295.1	194595	195308	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1189; haemolysin	194595..195308	Mycoplasma hyopneumoniae J	3563919
YP_278962.1	CDS	nifS	NC_007295.1	195301	196446	D	identified by sequence similarity; ORF located using Blastx; COG0520; nitrogen fixation protein	195301..196446	Mycoplasma hyopneumoniae J	3563604
YP_278963.1	CDS	MHJ_0161	NC_007295.1	196436	196867	D	identified by sequence similarity; ORF located using Blastx; COG0822; hypothetical protein	196436..196867	Mycoplasma hyopneumoniae J	3563605
YP_278964.1	CDS	rluB	NC_007295.1	196857	197570	D	identified by sequence similarity; ORF located using Blastx; COG1187; ribosomal large subunit pseudouridine synthase B	196857..197570	Mycoplasma hyopneumoniae J	3563606
YP_278965.1	CDS	rplQ	NC_007295.1	197779	198141	R	is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17	complement(197779..198141)	Mycoplasma hyopneumoniae J	3563607
YP_278966.1	CDS	rpoA	NC_007295.1	198144	199142	R	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha	complement(198144..199142)	Mycoplasma hyopneumoniae J	3563670
YP_278967.1	CDS	rpsK	NC_007295.1	199149	199553	R	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11	complement(199149..199553)	Mycoplasma hyopneumoniae J	3563671
YP_278968.1	CDS	rpsM	NC_007295.1	199556	199969	R	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13	complement(199556..199969)	Mycoplasma hyopneumoniae J	3563608
YP_278969.1	CDS	rpmJ	NC_007295.1	200115	200228	R	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36	complement(200115..200228)	Mycoplasma hyopneumoniae J	3563664
YP_278970.1	CDS	infA	NC_007295.1	200273	200491	R	stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1	complement(200273..200491)	Mycoplasma hyopneumoniae J	3563278
YP_278971.1	CDS	map	NC_007295.1	200501	201253	R	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase	complement(200501..201253)	Mycoplasma hyopneumoniae J	3563279
YP_278972.1	CDS	adk	NC_007295.1	201244	201882	R	identified by sequence similarity; ORF located using Blastx; COG0563; adenylate kinase	complement(201244..201882)	Mycoplasma hyopneumoniae J	3563280
YP_278973.1	CDS	secY	NC_007295.1	201928	203349	R	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY	complement(201928..203349)	Mycoplasma hyopneumoniae J	3563281
YP_278974.1	CDS	rplO	NC_007295.1	203349	203786	R	late assembly protein; 50S ribosomal protein L15	complement(203349..203786)	Mycoplasma hyopneumoniae J	3563282
YP_278975.1	CDS	rpsE	NC_007295.1	203905	204555	R	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5	complement(203905..204555)	Mycoplasma hyopneumoniae J	3563283
YP_278976.1	CDS	rplR	NC_007295.1	204557	204925	R	binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18	complement(204557..204925)	Mycoplasma hyopneumoniae J	3563284
YP_278977.1	CDS	rplF	NC_007295.1	204925	205464	R	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6	complement(204925..205464)	Mycoplasma hyopneumoniae J	3563285
YP_278978.1	CDS	rpsH	NC_007295.1	205471	205866	R	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8	complement(205471..205866)	Mycoplasma hyopneumoniae J	3563286
YP_278979.1	CDS	rpsN	NC_007295.1	205872	206057	R	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14	complement(205872..206057)	Mycoplasma hyopneumoniae J	3563665
YP_278980.1	CDS	rplE	NC_007295.1	206104	206646	R	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5	complement(206104..206646)	Mycoplasma hyopneumoniae J	3563666
YP_278981.1	CDS	rplX	NC_007295.1	206653	206976	R	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24	complement(206653..206976)	Mycoplasma hyopneumoniae J	3563921
YP_278982.1	CDS	rplN	NC_007295.1	206981	207349	R	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14	complement(206981..207349)	Mycoplasma hyopneumoniae J	3563922
YP_278983.1	CDS	rpsQ	NC_007295.1	207351	207623	R	primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17	complement(207351..207623)	Mycoplasma hyopneumoniae J	3563923
YP_278984.1	CDS	rpmC	NC_007295.1	207631	207999	R	one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29	complement(207631..207999)	Mycoplasma hyopneumoniae J	3563924
YP_278985.1	CDS	rplP	NC_007295.1	208004	208414	R	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16	complement(208004..208414)	Mycoplasma hyopneumoniae J	3563925
YP_278986.2	CDS	rpsC	NC_007295.1	208417	209100	R	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3	complement(208417..209100)	Mycoplasma hyopneumoniae J	3563926
YP_278987.1	CDS	rplV	NC_007295.1	209100	209690	R	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22	complement(209100..209690)	Mycoplasma hyopneumoniae J	3563927
YP_278988.1	CDS	rpsS	NC_007295.1	209725	209997	R	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19	complement(209725..209997)	Mycoplasma hyopneumoniae J	3563822
YP_278989.1	CDS	rplB	NC_007295.1	209997	210845	R	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2	complement(209997..210845)	Mycoplasma hyopneumoniae J	3563823
YP_278990.1	CDS	rplW	NC_007295.1	210968	211471	R	binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23	complement(210968..211471)	Mycoplasma hyopneumoniae J	3563824
YP_278991.1	CDS	rplD	NC_007295.1	211475	212095	R	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4	complement(211475..212095)	Mycoplasma hyopneumoniae J	3563825
YP_278992.1	CDS	rplC	NC_007295.1	212112	212804	R	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3	complement(212112..212804)	Mycoplasma hyopneumoniae J	3563826
YP_278993.1	CDS	rpsJ	NC_007295.1	212806	213177	R	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10	complement(212806..213177)	Mycoplasma hyopneumoniae J	3563827
YP_278995.1	CDS	MHJ_0193	NC_007295.1	213712	214140	D	hypothetical protein	213712..214140	Mycoplasma hyopneumoniae J	3563829
YP_278996.1	CDS	MHJ_0194	NC_007295.1	214552	217830	D	copy 1; identified by sequence similarity; ORF located using Blastx; protein P97	214552..217830	Mycoplasma hyopneumoniae J	3563830
YP_278997.1	CDS	MHJ_0195	NC_007295.1	217851	220565	D	copy 1; identified by sequence similarity; ORF located using Blastx; protein P102	217851..220565	Mycoplasma hyopneumoniae J	3563831
YP_278998.1	CDS	MHJ_0196	NC_007295.1	220882	221565	R	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE	complement(220882..221565)	Mycoplasma hyopneumoniae J	3563832
YP_278999.1	CDS	alaS	NC_007295.1	221649	224291	D	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase	221649..224291	Mycoplasma hyopneumoniae J	3563833
YP_279000.1	CDS	MHJ_0198	NC_007295.1	224306	224698	D	identified by sequence similarity; ORF located using Blastx; COG0816; hypothetical protein	224306..224698	Mycoplasma hyopneumoniae J	3563834
YP_279001.1	CDS	MHJ_0199	NC_007295.1	224704	225132	D	hypothetical protein	224704..225132	Mycoplasma hyopneumoniae J	3563835
YP_279002.1	CDS	pth	NC_007295.1	225166	225720	D	Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase	225166..225720	Mycoplasma hyopneumoniae J	3563836
YP_279003.1	CDS	MHJ_0201	NC_007295.1	225731	226591	D	identified by sequence similarity; ORF located using Blastx; COG0037; hypothetical protein	225731..226591	Mycoplasma hyopneumoniae J	3563837
YP_279004.1	CDS	ftsH	NC_007295.1	226628	228778	D	identified by sequence similarity; ORF located using Blastx; COG0465; cell division protein	226628..228778	Mycoplasma hyopneumoniae J	3563838
YP_279005.1	CDS	lysS	NC_007295.1	228897	230366	D	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase	228897..230366	Mycoplasma hyopneumoniae J	3563839
YP_279006.1	CDS	MHJ_0204	NC_007295.1	230368	231198	D	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG0561; HAD family hydrolase	230368..231198	Mycoplasma hyopneumoniae J	3563840
YP_279007.1	CDS	trmE	NC_007295.1	231187	232515	R	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE	complement(231187..232515)	Mycoplasma hyopneumoniae J	3563841
YP_279008.1	CDS	MHJ_0206	NC_007295.1	232559	234175	R	identified by sequence similarity; ORF located using Blastx; COG0488; ABC transporter ATP-binding protein	complement(232559..234175)	Mycoplasma hyopneumoniae J	3563803
YP_279009.1	CDS	MHJ_0207	NC_007295.1	234333	235397	D	hypothetical protein	234333..235397	Mycoplasma hyopneumoniae J	3563804
YP_279010.1	CDS	oppB-1	NC_007295.1	235856	236956	D	identified by sequence similarity; ORF located using Blastx; COG0601; oligopeptide ABC transporter system permease	235856..236956	Mycoplasma hyopneumoniae J	3563805
YP_279011.1	CDS	oppC-1	NC_007295.1	236974	237921	D	identified by sequence similarity; ORF located using Blastx; COG1173; TC:3.A.1.5.2; oligopeptide transport system permease	236974..237921	Mycoplasma hyopneumoniae J	3563806
YP_279012.1	CDS	oppD-1	NC_007295.1	238007	239335	D	identified by sequence similarity; ORF located using Blastx; COG0444; TC:3.A.1.5.2; oligopeptide ABC transporter ATP-binding protein	238007..239335	Mycoplasma hyopneumoniae J	3563807
YP_279013.1	CDS	oppF-1	NC_007295.1	239511	240656	D	identified by sequence similarity; ORF located using Blastx; oligopeptide ABC transporter ATP-binding protein	239511..240656	Mycoplasma hyopneumoniae J	3563808
YP_279014.1	CDS	MHJ_0212	NC_007295.1	240658	246786	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	240658..246786	Mycoplasma hyopneumoniae J	3563809
YP_279015.1	CDS	MHJ_0213	NC_007295.1	246806	249475	D	identified by sequence similarity; ORF located using Blastx; COG4166; lipoprotein	246806..249475	Mycoplasma hyopneumoniae J	3563810
YP_279016.1	CDS	MHJ_0214	NC_007295.1	249566	250330	R	hypothetical protein	complement(249566..250330)	Mycoplasma hyopneumoniae J	3563811
YP_279017.1	CDS	nrdE	NC_007295.1	251268	253409	R	Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha	complement(251268..253409)	Mycoplasma hyopneumoniae J	3563812
YP_279018.1	CDS	nrdI	NC_007295.1	253486	253938	R	in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein	complement(253486..253938)	Mycoplasma hyopneumoniae J	3563813
YP_279019.1	CDS	nrdF	NC_007295.1	253940	254959	R	B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta	complement(253940..254959)	Mycoplasma hyopneumoniae J	3563814
YP_279020.1	CDS	glyA	NC_007295.1	255658	256914	R	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase	complement(255658..256914)	Mycoplasma hyopneumoniae J	3563815
YP_279021.1	CDS	MHJ_0219	NC_007295.1	257420	258889	D	identified by sequence similarity; ORF located using Blastx; COG1012; methylmalonate-semialdehyde dehydrogenase	257420..258889	Mycoplasma hyopneumoniae J	3563816
YP_279022.1	CDS	iolC	NC_007295.1	258889	259905	D	identified by sequence similarity; ORF located using Blastx; COG0524; myo-inositol catabolism protein	258889..259905	Mycoplasma hyopneumoniae J	3563817
YP_279023.1	CDS	iolB	NC_007295.1	259910	260695	D	identified by sequence similarity; ORF located using Blastx; COG3718; myo-inositol catabolism protein	259910..260695	Mycoplasma hyopneumoniae J	3563818
YP_279024.1	CDS	MHJ_0222	NC_007295.1	260703	261704	D	identified by sequence similarity; ORF located using Blastx; COG0673; myo-inositol 2-dehydrogenase	260703..261704	Mycoplasma hyopneumoniae J	3563819
YP_279025.1	CDS	iolD	NC_007295.1	261704	263674	D	identified by sequence similarity; ORF located using GeneMark; Blastx; COG3962; myo-inositol catabolism protein	261704..263674	Mycoplasma hyopneumoniae J	3563820
YP_279026.1	CDS	iolE	NC_007295.1	263683	264576	D	identified by sequence similarity; ORF located using Blastx; COG1082; myo-inositol catabolism protein	263683..264576	Mycoplasma hyopneumoniae J	3563821
YP_279027.1	CDS	mglA	NC_007295.1	264612	266117	D	identified by sequence similarity; ORF located using Blastx; COG1129; ribose ABC transport ATP-binding protein	264612..266117	Mycoplasma hyopneumoniae J	3563630
YP_279028.1	CDS	MHJ_0226	NC_007295.1	266952	267944	D	identified by sequence similarity; ORF located using Blastx; COG1172; TC:3.A.1.2.1; ribose ABC transporter	266952..267944	Mycoplasma hyopneumoniae J	3563631
YP_279029.1	CDS	rbsB	NC_007295.1	267967	269172	D	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG1879; TC:3.A.2.1.2; periplasmic sugar-binding proteins	267967..269172	Mycoplasma hyopneumoniae J	3563632
YP_279030.1	CDS	MHJ_0228	NC_007295.1	269195	270238	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0673; TC:3.A.2.1.2; myo-inositol 2-dehydrogenase	269195..270238	Mycoplasma hyopneumoniae J	3563633
YP_279031.1	CDS	MHJ_0229	NC_007295.1	270349	271407	R	hypothetical protein	complement(270349..271407)	Mycoplasma hyopneumoniae J	3563634
YP_279032.2	CDS	MHJ_0230	NC_007295.1	271411	271845	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(271411..271845)	Mycoplasma hyopneumoniae J	3563635
YP_279033.1	CDS	MHJ_0231	NC_007295.1	272223	272771	R	hypothetical protein	complement(272223..272771)	Mycoplasma hyopneumoniae J	3563636
YP_279034.1	CDS	MHJ_0232	NC_007295.1	272782	273711	R	hypothetical protein	complement(272782..273711)	Mycoplasma hyopneumoniae J	3563637
YP_279035.1	CDS	secD	NC_007295.1	274230	276827	D	part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF	274230..276827	Mycoplasma hyopneumoniae J	3563638
YP_279036.1	CDS	hisS	NC_007295.1	276916	278202	D	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase	276916..278202	Mycoplasma hyopneumoniae J	3563639
YP_279037.1	CDS	aspS	NC_007295.1	278213	279898	D	identified by sequence similarity; ORF located using Blastx; COG0173; aspartyl-tRNA synthetase	278213..279898	Mycoplasma hyopneumoniae J	3563640
YP_279038.1	CDS	MHJ_0236	NC_007295.1	279973	280428	D	identified by sequence similarity; ORF located using Blastx; COG2731; hypothetical protein	279973..280428	Mycoplasma hyopneumoniae J	3563641
YP_279039.1	CDS	rpsT	NC_007295.1	280568	280840	D	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20	280568..280840	Mycoplasma hyopneumoniae J	3563642
YP_279040.1	CDS	MHJ_0238	NC_007295.1	281004	284591	R	identified by sequence similarity; ORF located using Blastx; TC:1.C.57.1.2; hypothetical protein	complement(281004..284591)	Mycoplasma hyopneumoniae J	3563643
YP_279041.1	CDS	MHJ_0239	NC_007295.1	284636	287272	R	identified by sequence similarity; ORF located using Blastx; COG3451; TRSE-like protein	complement(284636..287272)	Mycoplasma hyopneumoniae J	3563644
YP_279042.1	CDS	MHJ_0240	NC_007295.1	287311	289557	R	hypothetical protein	complement(287311..289557)	Mycoplasma hyopneumoniae J	3563645
YP_279043.1	CDS	smf	NC_007295.1	289865	290644	R	identified by sequence similarity; ORF located using Blastx; COG0758; DNA processing protein SMF	complement(289865..290644)	Mycoplasma hyopneumoniae J	3563646
YP_279044.1	CDS	eno	NC_007295.1	290939	292294	D	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase	290939..292294	Mycoplasma hyopneumoniae J	3563647
YP_279045.1	CDS	serS	NC_007295.1	292303	293547	D	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase	292303..293547	Mycoplasma hyopneumoniae J	3563648
YP_279046.1	CDS	MHJ_0244	NC_007295.1	293627	294196	D	identified by sequence similarity; ORF located using Blastx; COG0693; hypothetical protein	293627..294196	Mycoplasma hyopneumoniae J	3563649
YP_279047.1	CDS	lip	NC_007295.1	294199	294999	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0596; triacylglycerol lipase	complement(294199..294999)	Mycoplasma hyopneumoniae J	3563499
YP_279048.1	CDS	lplA	NC_007295.1	295000	296001	R	identified by sequence similarity; ORF located using Blastx; COG0095; lipoate-protein ligase A	complement(295000..296001)	Mycoplasma hyopneumoniae J	3563500
YP_279049.1	CDS	MHJ_0247	NC_007295.1	296015	296365	R	hypothetical protein	complement(296015..296365)	Mycoplasma hyopneumoniae J	3563501
YP_279050.1	CDS	dnaX	NC_007295.1	296477	298624	D	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau	296477..298624	Mycoplasma hyopneumoniae J	3563502
YP_279051.1	CDS	MHJ_0249	NC_007295.1	298662	298967	D	identified by sequence similarity; ORF located using Blastx; COG0718; hypothetical protein	298662..298967	Mycoplasma hyopneumoniae J	3563503
YP_279052.1	CDS	recR	NC_007295.1	298970	299554	D	involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR	298970..299554	Mycoplasma hyopneumoniae J	3563848
YP_279053.1	CDS	tmk	NC_007295.1	299551	300192	D	identified by sequence similarity; ORF located using Blastx; COG0125; thymidylate kinase	299551..300192	Mycoplasma hyopneumoniae J	3563908
YP_279054.1	CDS	MHJ_0252	NC_007295.1	300233	301045	D	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta'	300233..301045	Mycoplasma hyopneumoniae J	3563872
YP_279055.1	CDS	MHJ_0253	NC_007295.1	301175	301783	D	identified by sequence similarity; ORF located using Blastx; COG0313; hypothetical protein	301175..301783	Mycoplasma hyopneumoniae J	3563778
YP_279056.1	CDS	hpt	NC_007295.1	301816	302352	D	Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase	301816..302352	Mycoplasma hyopneumoniae J	3563779
YP_279057.1	CDS	cbiO	NC_007295.1	302382	303200	D	with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit	302382..303200	Mycoplasma hyopneumoniae J	3563780
YP_279058.1	CDS	MHJ_0256	NC_007295.1	303173	304075	D	with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit	303173..304075	Mycoplasma hyopneumoniae J	3563781
YP_279059.1	CDS	MHJ_0257	NC_007295.1	304065	305027	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0619; ABC transporter permease	304065..305027	Mycoplasma hyopneumoniae J	3563782
YP_279060.1	CDS	lig	NC_007295.1	305028	307109	D	identified by sequence similarity; ORF located using Blastx; COG0272; DNA ligase	305028..307109	Mycoplasma hyopneumoniae J	3563783
YP_279061.1	CDS	MHJ_0259	NC_007295.1	307179	308132	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1323; hypothetical protein	307179..308132	Mycoplasma hyopneumoniae J	3563784
YP_279062.1	CDS	mgtA	NC_007295.1	308129	310702	R	identified by sequence similarity; ORF located using Blastx; COG0474; cation-transporting P-type ATPase	complement(308129..310702)	Mycoplasma hyopneumoniae J	3563785
YP_279063.1	CDS	smpB	NC_007295.1	310834	311271	D	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein	310834..311271	Mycoplasma hyopneumoniae J	3563786
YP_279064.1	CDS	MHJ_0262	NC_007295.1	311271	311897	D	identified by sequence similarity; ORF located using Blastx; COG1525; nuclease, lipoprotein	311271..311897	Mycoplasma hyopneumoniae J	3563787
YP_279065.1	CDS	MHJ_0263	NC_007295.1	312028	315012	R	identified by sequence similarity; ORF located using Blastx; P102-like protein	complement(312028..315012)	Mycoplasma hyopneumoniae J	3563788
YP_279066.1	CDS	MHJ_0264	NC_007295.1	315111	318182	R	identified by sequence similarity; ORF located using Blastx; P97-like protein	complement(315111..318182)	Mycoplasma hyopneumoniae J	3563789
YP_279067.1	CDS	pheS	NC_007295.1	318698	319387	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0016; phenylalanyl-tRNA synthetase subunit alpha	318698..319387	Mycoplasma hyopneumoniae J	3563790
YP_279068.1	CDS	pheT	NC_007295.1	319398	321554	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta	319398..321554	Mycoplasma hyopneumoniae J	3563791
YP_279069.1	CDS	rpmF	NC_007295.1	321613	321810	D	some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32	321613..321810	Mycoplasma hyopneumoniae J	3563792
YP_279070.1	CDS	truB	NC_007295.1	322434	323276	D	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B	322434..323276	Mycoplasma hyopneumoniae J	3563793
YP_279071.1	CDS	MHJ_0269	NC_007295.1	323278	324099	D	identified by sequence similarity; ORF located using Blastx; COG0561; hypothetical protein	323278..324099	Mycoplasma hyopneumoniae J	3563794
YP_279072.1	CDS	MHJ_0270	NC_007295.1	324092	324937	D	identified by sequence similarity; ORF located using Blastx; COG0196; hypothetical protein	324092..324937	Mycoplasma hyopneumoniae J	3563795
YP_279073.1	CDS	MHJ_0271	NC_007295.1	324934	325752	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1737; transcriptional regulator	complement(324934..325752)	Mycoplasma hyopneumoniae J	3563796
YP_279074.2	CDS	pyrG	NC_007295.1	326279	327883	D	CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase	326279..327883	Mycoplasma hyopneumoniae J	3563797
YP_279075.1	CDS	pgsA	NC_007295.1	327895	328461	R	identified by sequence similarity; ORF located using Blastx; COG0558; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	complement(327895..328461)	Mycoplasma hyopneumoniae J	3563798
YP_279076.1	CDS	MHJ_0274	NC_007295.1	328464	329111	R	hypothetical protein	complement(328464..329111)	Mycoplasma hyopneumoniae J	3563799
YP_279077.1	CDS	topA	NC_007295.1	329142	331064	R	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I	complement(329142..331064)	Mycoplasma hyopneumoniae J	3563800
YP_279078.1	CDS	rplS	NC_007295.1	331057	331422	R	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19	complement(331057..331422)	Mycoplasma hyopneumoniae J	3563801
YP_279079.1	CDS	trmD	NC_007295.1	331476	332159	R	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase	complement(331476..332159)	Mycoplasma hyopneumoniae J	3563802
YP_279080.1	CDS	rpsP	NC_007295.1	332181	332447	R	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16	complement(332181..332447)	Mycoplasma hyopneumoniae J	3563689
YP_279081.1	CDS	MHJ_0279	NC_007295.1	332735	333187	R	hypothetical protein	complement(332735..333187)	Mycoplasma hyopneumoniae J	3563690
YP_279082.1	CDS	MHJ_0280	NC_007295.1	333347	335404	R	identified by sequence similarity; ORF located using Blastx; TC:3.A.1.106.1; ABC transporter ATP-binding protein	complement(333347..335404)	Mycoplasma hyopneumoniae J	3563691
YP_279083.1	CDS	MHJ_0281	NC_007295.1	335642	337528	R	hypothetical protein	complement(335642..337528)	Mycoplasma hyopneumoniae J	3563692
YP_279084.1	CDS	MHJ_0282	NC_007295.1	337532	338071	R	hypothetical protein	complement(337532..338071)	Mycoplasma hyopneumoniae J	3563693
YP_279085.1	CDS	MHJ_0283	NC_007295.1	338677	339198	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	338677..339198	Mycoplasma hyopneumoniae J	3563694
YP_279086.1	CDS	ychF	NC_007295.1	339318	340421	R	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD	complement(339318..340421)	Mycoplasma hyopneumoniae J	3563695
YP_279087.2	CDS	rpsR	NC_007295.1	340431	340694	R	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18	complement(340431..340694)	Mycoplasma hyopneumoniae J	3563696
YP_279088.1	CDS	ssb	NC_007295.1	340712	341272	R	identified by sequence similarity; ORF located using Blastx; COG0629; single-strand binding protein	complement(340712..341272)	Mycoplasma hyopneumoniae J	3563697
YP_279089.1	CDS	rpsF	NC_007295.1	341290	342015	R	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6	complement(341290..342015)	Mycoplasma hyopneumoniae J	3563698
YP_279090.1	CDS	MHJ_0288	NC_007295.1	342721	343863	R	hypothetical protein	complement(342721..343863)	Mycoplasma hyopneumoniae J	3563699
YP_279091.1	CDS	MHJ_0289	NC_007295.1	343902	344666	R	hypothetical protein	complement(343902..344666)	Mycoplasma hyopneumoniae J	3563700
YP_279092.1	CDS	MHJ_0290	NC_007295.1	344847	345599	D	hypothetical protein	344847..345599	Mycoplasma hyopneumoniae J	3563701
YP_279093.1	CDS	MHJ_0291	NC_007295.1	346450	347547	D	hypothetical protein	346450..347547	Mycoplasma hyopneumoniae J	3563702
YP_279094.1	CDS	MHJ_0292	NC_007295.1	347703	348098	D	hypothetical protein	347703..348098	Mycoplasma hyopneumoniae J	3563703
YP_279095.1	CDS	MHJ_0293	NC_007295.1	348157	348579	D	hypothetical protein	348157..348579	Mycoplasma hyopneumoniae J	3563704
YP_279096.1	CDS	MHJ_0294	NC_007295.1	348732	350165	D	identified by sequence similarity; ORF located using Blastx; COG0477; permease	348732..350165	Mycoplasma hyopneumoniae J	3563705
YP_279097.1	CDS	ugpQ	NC_007295.1	350158	350892	D	identified by sequence similarity; ORF located using Blastx; COG0584; TC:3.A.1.109.1; glycerophosphoryl diester phosphodiesterase	350158..350892	Mycoplasma hyopneumoniae J	3563706
YP_279098.1	CDS	MHJ_0297	NC_007295.1	351466	353418	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1126; TC:3.A.1.123.3; ABC transporter ATP-binding protein	complement(351466..353418)	Mycoplasma hyopneumoniae J	3563708
YP_279099.1	CDS	MHJ_0298	NC_007295.1	353495	355777	R	identified by sequence similarity; ORF located using Blastx; TC:3.A.1.123.3; ABC transporter ATP-binding protein	complement(353495..355777)	Mycoplasma hyopneumoniae J	3563709
YP_279100.1	CDS	MHJ_0299	NC_007295.1	355743	356654	R	hypothetical protein	complement(355743..356654)	Mycoplasma hyopneumoniae J	3563710
YP_279101.1	CDS	MHJ_0300	NC_007295.1	357335	363076	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	357335..363076	Mycoplasma hyopneumoniae J	3563711
YP_279102.1	CDS	baiH	NC_007295.1	363383	364555	R	identified by sequence similarity; ORF located using Blastx; COG1902; NADH-dependent flavin oxidoreductase	complement(363383..364555)	Mycoplasma hyopneumoniae J	3563712
YP_279103.1	CDS	lplA-1	NC_007295.1	364558	365589	R	identified by sequence similarity; ORF located using Blastx; lipoate-protein ligase A	complement(364558..365589)	Mycoplasma hyopneumoniae J	3563713
YP_279104.1	CDS	MHJ_0303	NC_007295.1	365592	366434	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(365592..366434)	Mycoplasma hyopneumoniae J	3563714
YP_279105.1	CDS	MHJ_0304	NC_007295.1	366436	366768	R	identified by sequence similarity; ORF located using Blastx; COG0509; glycine cleavage system H protein	complement(366436..366768)	Mycoplasma hyopneumoniae J	3563715
YP_279106.1	CDS	MHJ_0305	NC_007295.1	367181	368002	D	hypothetical protein	367181..368002	Mycoplasma hyopneumoniae J	3563716
YP_279107.1	CDS	MHJ_0306	NC_007295.1	368005	370323	D	identified by sequence similarity; ORF located using Blastx; COG1136; TC:3.A.1.123.3; ABC transporter ATP-binding protein	368005..370323	Mycoplasma hyopneumoniae J	3563717
YP_279108.1	CDS	MHJ_0307	NC_007295.1	370415	372367	D	identified by sequence similarity; ORF located using Blastx; COG1136; TC:3.A.1.123.3; ABC transporter ATP-binding protein	370415..372367	Mycoplasma hyopneumoniae J	3563718
YP_279109.1	CDS	MHJ_0309	NC_007295.1	374223	376634	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	374223..376634	Mycoplasma hyopneumoniae J	3563720
YP_279110.1	CDS	MHJ_0310	NC_007295.1	377193	378851	R	identified by sequence similarity; ORF located using Blastx; ISMHp1 transposase	complement(377193..378851)	Mycoplasma hyopneumoniae J	3563721
YP_279111.1	CDS	MHJ_0311	NC_007295.1	379203	380228	D	hypothetical protein	379203..380228	Mycoplasma hyopneumoniae J	3563722
YP_279112.1	CDS	MHJ_0312	NC_007295.1	380248	381579	D	hypothetical protein	380248..381579	Mycoplasma hyopneumoniae J	3563723
YP_279113.1	CDS	MHJ_0313	NC_007295.1	382033	382269	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	382033..382269	Mycoplasma hyopneumoniae J	3563724
YP_279114.1	CDS	MHJ_0314	NC_007295.1	382692	384149	R	hypothetical protein	complement(382692..384149)	Mycoplasma hyopneumoniae J	3563725
YP_279115.1	CDS	MHJ_0315	NC_007295.1	384154	384813	R	hypothetical protein	complement(384154..384813)	Mycoplasma hyopneumoniae J	3563726
YP_279116.1	CDS	MHJ_0316	NC_007295.1	385311	385574	D	hypothetical protein	385311..385574	Mycoplasma hyopneumoniae J	3563727
YP_279117.1	CDS	MHJ_0317	NC_007295.1	385706	385975	R	hypothetical protein	complement(385706..385975)	Mycoplasma hyopneumoniae J	3563445
YP_279118.1	CDS	MHJ_0318	NC_007295.1	386038	386466	R	hypothetical protein	complement(386038..386466)	Mycoplasma hyopneumoniae J	3563446
YP_279119.1	CDS	MHJ_0319	NC_007295.1	386475	387917	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1002; hypothetical protein	complement(386475..387917)	Mycoplasma hyopneumoniae J	3563447
YP_279120.1	CDS	MHJ_0320	NC_007295.1	388065	388967	R	hypothetical protein	complement(388065..388967)	Mycoplasma hyopneumoniae J	3563448
YP_279121.1	CDS	MHJ_0321	NC_007295.1	389055	389984	R	hypothetical protein	complement(389055..389984)	Mycoplasma hyopneumoniae J	3563449
YP_279122.1	CDS	MHJ_0322	NC_007295.1	389986	390894	R	hypothetical protein	complement(389986..390894)	Mycoplasma hyopneumoniae J	3563450
YP_279123.1	CDS	MHJ_0323	NC_007295.1	391214	391477	D	hypothetical protein	391214..391477	Mycoplasma hyopneumoniae J	3563451
YP_279124.1	CDS	MHJ_0324	NC_007295.1	391532	392164	R	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	complement(391532..392164)	Mycoplasma hyopneumoniae J	3563452
YP_279125.1	CDS	MHJ_0325	NC_007295.1	392553	393641	D	hypothetical protein	392553..393641	Mycoplasma hyopneumoniae J	3563453
YP_279126.1	CDS	MHJ_0326	NC_007295.1	393711	394358	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1704; hypothetical protein	393711..394358	Mycoplasma hyopneumoniae J	3563454
YP_279127.1	CDS	MHJ_0327	NC_007295.1	394895	395356	R	hypothetical protein	complement(394895..395356)	Mycoplasma hyopneumoniae J	3563455
YP_279128.1	CDS	MHJ_0328	NC_007295.1	395837	396589	D	hypothetical protein	395837..396589	Mycoplasma hyopneumoniae J	3563456
YP_279129.1	CDS	MHJ_0329	NC_007295.1	396657	398315	R	identified by sequence similarity; ORF located using Blastx; transposase	complement(396657..398315)	Mycoplasma hyopneumoniae J	3563457
YP_279130.1	CDS	MHJ_0330	NC_007295.1	399163	400422	R	hypothetical protein	complement(399163..400422)	Mycoplasma hyopneumoniae J	3563458
YP_279131.1	CDS	MHJ_0331	NC_007295.1	400637	401422	R	hypothetical protein	complement(400637..401422)	Mycoplasma hyopneumoniae J	3563459
YP_279132.1	CDS	MHJ_0332	NC_007295.1	402065	404461	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1404; hypothetical protein	complement(402065..404461)	Mycoplasma hyopneumoniae J	3563460
YP_279133.1	CDS	MHJ_0333	NC_007295.1	405169	407556	R	identified by sequence similarity; ORF located using Blastx; COG1136; TC:3.A.1.3.2; ABC transporter ATP-binding protein	complement(405169..407556)	Mycoplasma hyopneumoniae J	3563461
YP_279134.1	CDS	MHJ_0334	NC_007295.1	407543	409399	R	hypothetical protein	complement(407543..409399)	Mycoplasma hyopneumoniae J	3563462
YP_279135.1	CDS	MHJ_0335	NC_007295.1	409435	410103	R	hypothetical protein	complement(409435..410103)	Mycoplasma hyopneumoniae J	3563463
YP_279136.1	CDS	MHJ_0337	NC_007295.1	411710	412723	R	hypothetical protein	complement(411710..412723)	Mycoplasma hyopneumoniae J	3563465
YP_279137.1	CDS	MHJ_0338	NC_007295.1	413306	413500	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(413306..413500)	Mycoplasma hyopneumoniae J	3563466
YP_279138.1	CDS	MHJ_0339	NC_007295.1	413711	414025	D	hypothetical protein	413711..414025	Mycoplasma hyopneumoniae J	3563467
YP_279139.1	CDS	MHJ_0340	NC_007295.1	414028	414630	D	hypothetical protein	414028..414630	Mycoplasma hyopneumoniae J	3563468
YP_279140.1	CDS	MHJ_0341	NC_007295.1	414651	415721	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	414651..415721	Mycoplasma hyopneumoniae J	3563469
YP_279141.1	CDS	MHJ_0342	NC_007295.1	416857	417714	R	hypothetical protein	complement(416857..417714)	Mycoplasma hyopneumoniae J	3563470
YP_279142.1	CDS	MHJ_0343	NC_007295.1	418260	418535	R	hypothetical protein	complement(418260..418535)	Mycoplasma hyopneumoniae J	3563471
YP_279143.1	CDS	MHJ_0344	NC_007295.1	418712	419539	R	hypothetical protein	complement(418712..419539)	Mycoplasma hyopneumoniae J	3563472
YP_279144.1	CDS	MHJ_0345	NC_007295.1	419702	420691	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(419702..420691)	Mycoplasma hyopneumoniae J	3563473
YP_279145.1	CDS	MHJ_0346	NC_007295.1	420694	422034	R	identified by sequence similarity; ORF located using Blastx; COG0561; hypothetical protein	complement(420694..422034)	Mycoplasma hyopneumoniae J	3563474
YP_279146.1	CDS	MHJ_0347	NC_007295.1	422146	424299	D	hypothetical protein	422146..424299	Mycoplasma hyopneumoniae J	3563475
YP_279147.1	CDS	MHJ_0348	NC_007295.1	424315	425913	D	identified by sequence similarity; ORF located using Glimmer; Blastx; P60-like lipoprotein	424315..425913	Mycoplasma hyopneumoniae J	3563476
YP_279148.1	CDS	hit	NC_007295.1	425945	426277	D	identified by sequence similarity; ORF located using Blastx; COG0537; HIT-like protein	425945..426277	Mycoplasma hyopneumoniae J	3563477
YP_279149.1	CDS	MHJ_0350	NC_007295.1	426332	427981	R	hypothetical protein	complement(426332..427981)	Mycoplasma hyopneumoniae J	3563478
YP_279150.1	CDS	MHJ_0351	NC_007295.1	428092	429111	R	hypothetical protein	complement(428092..429111)	Mycoplasma hyopneumoniae J	3563479
YP_279151.1	CDS	MHJ_0352	NC_007295.1	429120	429650	R	hypothetical protein	complement(429120..429650)	Mycoplasma hyopneumoniae J	3563480
YP_279152.1	CDS	MHJ_0353	NC_007295.1	429765	431321	D	identified by sequence similarity; ORF located using Blastx; COG0531; TC:2.A.3.8.5; amino acid permease	429765..431321	Mycoplasma hyopneumoniae J	3563481
YP_279153.1	CDS	glpF	NC_007295.1	431698	432444	R	identified by sequence similarity; ORF located using Blastx; COG0580; TC:1.A.8.2.1; glycerol uptake facilitator protein	complement(431698..432444)	Mycoplasma hyopneumoniae J	3563943
YP_279154.1	CDS	glpK	NC_007295.1	432458	433990	R	Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase	complement(432458..433990)	Mycoplasma hyopneumoniae J	3563944
YP_279155.1	CDS	MHJ_0356	NC_007295.1	434330	435595	D	identified by sequence similarity; ORF located using Blastx; P37-like ABC transporter substrate-binding lipoprotein	434330..435595	Mycoplasma hyopneumoniae J	3563945
YP_279156.1	CDS	MHJ_0357	NC_007295.1	435579	436349	D	identified by sequence similarity; ORF located using Blastx; ABC transporter ATP-binding protein	435579..436349	Mycoplasma hyopneumoniae J	3563946
YP_279157.1	CDS	MHJ_0358	NC_007295.1	436327	438048	D	identified by sequence similarity; ORF located using Blastx; COG3639; ABC transport system permease p69 - like	436327..438048	Mycoplasma hyopneumoniae J	3563947
YP_279158.1	CDS	MHJ_0359	NC_007295.1	438156	438632	D	hypothetical protein	438156..438632	Mycoplasma hyopneumoniae J	3563948
YP_279159.1	CDS	MHJ_0360	NC_007295.1	438650	439936	D	identified by sequence similarity; ORF located using Blastx; COG0658; TC:3.A.11.1.1; hypothetical protein	438650..439936	Mycoplasma hyopneumoniae J	3563949
YP_279160.1	CDS	MHJ_0361	NC_007295.1	439948	440784	D	hypothetical protein	439948..440784	Mycoplasma hyopneumoniae J	3563950
YP_279161.1	CDS	MHJ_0362	NC_007295.1	441117	443312	D	identified by sequence similarity; ORF located using Blastx; lipoprotein	441117..443312	Mycoplasma hyopneumoniae J	3563951
YP_279162.1	CDS	MHJ_0363	NC_007295.1	443369	445444	D	identified by sequence similarity; ORF located using Blastx; lipoprotein	443369..445444	Mycoplasma hyopneumoniae J	3563952
YP_279163.1	CDS	MHJ_0364	NC_007295.1	445471	446403	D	identified by sequence similarity; ORF located using Blastx; COG1525; lipoprotein	445471..446403	Mycoplasma hyopneumoniae J	3563953
YP_279164.2	CDS	MHJ_0365	NC_007295.1	446417	448594	D	identified by sequence similarity; ORF located using Blastx; ABC transporter permease	446417..448594	Mycoplasma hyopneumoniae J	3563954
YP_279165.1	CDS	MHJ_0366	NC_007295.1	448603	449604	D	identified by sequence similarity; ORF located using Blastx; COG1175; TC:3.A.1.1.3; ABC transport permease	448603..449604	Mycoplasma hyopneumoniae J	3563955
YP_279166.2	CDS	MHJ_0367	NC_007295.1	449567	450532	D	identified by sequence similarity; ORF located using Blastx; COG0395; TC:3.A.1.1.4; ABC transporter permease	449567..450532	Mycoplasma hyopneumoniae J	3563956
YP_279167.1	CDS	MHJ_0368	NC_007295.1	450864	453737	R	identified by sequence similarity; ORF located using Glimmer; Blastx; Lppt protein	complement(450864..453737)	Mycoplasma hyopneumoniae J	3563957
YP_279168.1	CDS	MHJ_0369	NC_007295.1	453750	456698	R	identified by sequence similarity; ORF located using Blastx; COG0419; hypothetical protein	complement(453750..456698)	Mycoplasma hyopneumoniae J	3563958
YP_279169.1	CDS	sgaA	NC_007295.1	456869	457348	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1762; PTS system transporter subunit IIA	complement(456869..457348)	Mycoplasma hyopneumoniae J	3563959
YP_279170.1	CDS	MHJ_0371	NC_007295.1	457373	457663	R	identified by sequence similarity; ORF located using Blastx; COG3414; PTS system transporter subunit IIB	complement(457373..457663)	Mycoplasma hyopneumoniae J	3563960
YP_279171.1	CDS	ulaA	NC_007295.1	458086	459855	R	membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC	complement(458086..459855)	Mycoplasma hyopneumoniae J	3563961
YP_279172.1	CDS	MHJ_0373	NC_007295.1	459953	461005	R	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG1735; hypothetical protein	complement(459953..461005)	Mycoplasma hyopneumoniae J	3563962
YP_279173.1	CDS	MHJ_0374	NC_007295.1	461191	463005	R	identified by sequence similarity; ORF located using Glimmer; Blastx; lipoprotein	complement(461191..463005)	Mycoplasma hyopneumoniae J	3563963
YP_279174.1	CDS	MHJ_0375	NC_007295.1	463146	464309	D	identified by sequence similarity; ORF located using Blastx; COG3839; ABC transport ATP-binding protein	463146..464309	Mycoplasma hyopneumoniae J	3563964
YP_279175.1	CDS	MHJ_0376	NC_007295.1	464305	465234	D	identified by sequence similarity; ORF located using Blastx; COG1175; TC:3.A.1.1.10; ABC transporter permease	464305..465234	Mycoplasma hyopneumoniae J	3563965
YP_279176.1	CDS	MHJ_0377	NC_007295.1	465230	466057	D	identified by sequence similarity; ORF located using Blastx; COG0395; TC:3.A.1.1.3; ABC transporter permease	465230..466057	Mycoplasma hyopneumoniae J	3563966
YP_279177.1	CDS	MHJ_0378	NC_007295.1	466127	466633	D	identified by sequence similarity; ORF located using Blastx; COG1739; proline dipeptidase	466127..466633	Mycoplasma hyopneumoniae J	3563967
YP_279178.1	CDS	MHJ_0379	NC_007295.1	466743	469043	D	identified by sequence similarity; ORF located using Blastx; COG0313; TC:3.A.1.109.1; ABC transporter ATP-binding protein	466743..469043	Mycoplasma hyopneumoniae J	3563968
YP_279179.1	CDS	MHJ_0380	NC_007295.1	469140	469472	R	identified by sequence similarity; ORF located using GeneMark; Blastx; COG0526; thioredoxin	complement(469140..469472)	Mycoplasma hyopneumoniae J	3563969
YP_279180.1	CDS	proS	NC_007295.1	469539	470978	R	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase	complement(469539..470978)	Mycoplasma hyopneumoniae J	3563970
YP_279181.1	CDS	MHJ_0383	NC_007295.1	473202	474929	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG2189; type III restriction-modification system: methylase	473202..474929	Mycoplasma hyopneumoniae J	3563972
YP_279182.1	CDS	MHJ_0384	NC_007295.1	474947	477379	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	474947..477379	Mycoplasma hyopneumoniae J	3563973
YP_279183.1	CDS	MHJ_0385	NC_007295.1	478192	478419	R	identified by sequence similarity; ORF located using Blastx; transposase	complement(478192..478419)	Mycoplasma hyopneumoniae J	3563974
YP_279186.1	CDS	MHJ_0388	NC_007295.1	479478	479657	R	hypothetical protein	complement(479478..479657)	Mycoplasma hyopneumoniae J	3563977
YP_279187.1	CDS	MHJ_0389	NC_007295.1	479807	480739	D	hypothetical protein	479807..480739	Mycoplasma hyopneumoniae J	3563978
YP_279188.1	CDS	MHJ_0390	NC_007295.1	480789	481016	R	identified by sequence similarity; ORF located using Blastx; transposase	complement(480789..481016)	Mycoplasma hyopneumoniae J	3563979
YP_279191.1	CDS	MHJ_0393	NC_007295.1	482037	482216	R	hypothetical protein	complement(482037..482216)	Mycoplasma hyopneumoniae J	3563680
YP_279192.1	CDS	MHJ_0394	NC_007295.1	482355	483161	R	hypothetical protein	complement(482355..483161)	Mycoplasma hyopneumoniae J	3563681
YP_279193.1	CDS	MHJ_0395	NC_007295.1	483185	483976	R	hypothetical protein	complement(483185..483976)	Mycoplasma hyopneumoniae J	3563682
YP_279194.1	CDS	MHJ_0396	NC_007295.1	484167	484904	R	hypothetical protein	complement(484167..484904)	Mycoplasma hyopneumoniae J	3563738
YP_279195.1	CDS	MHJ_0397	NC_007295.1	484906	485496	R	hypothetical protein	complement(484906..485496)	Mycoplasma hyopneumoniae J	3563864
YP_279196.1	CDS	MHJ_0398	NC_007295.1	485839	487020	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(485839..487020)	Mycoplasma hyopneumoniae J	3563865
YP_279198.1	CDS	MHJ_0401	NC_007295.1	489474	489905	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	489474..489905	Mycoplasma hyopneumoniae J	3563739
YP_279199.1	CDS	MHJ_0402	NC_007295.1	489946	490272	D	hypothetical protein	489946..490272	Mycoplasma hyopneumoniae J	3563740
YP_279200.1	CDS	MHJ_0403	NC_007295.1	490301	491680	R	hypothetical protein	complement(490301..491680)	Mycoplasma hyopneumoniae J	3563741
YP_279201.1	CDS	MHJ_0404	NC_007295.1	492459	492899	D	MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ	492459..492899	Mycoplasma hyopneumoniae J	3563742
YP_279202.1	CDS	MHJ_0405	NC_007295.1	492901	493791	D	identified by sequence similarity; ORF located using Blastx; COG0275; S-adenosyl-methyltransferase	492901..493791	Mycoplasma hyopneumoniae J	3563743
YP_279203.1	CDS	ftsZ	NC_007295.1	493840	494805	D	identified by sequence similarity; ORF located using Blastx; COG0206; cell division protein ftsZ	493840..494805	Mycoplasma hyopneumoniae J	3563744
YP_279204.1	CDS	MHJ_0407	NC_007295.1	495034	496047	D	catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase	495034..496047	Mycoplasma hyopneumoniae J	3563745
YP_279205.1	CDS	MHJ_0408	NC_007295.1	496055	496807	D	identified by sequence similarity; ORF located using Blastx; COG4123; DNA methylase	496055..496807	Mycoplasma hyopneumoniae J	3563746
YP_279206.1	CDS	metG	NC_007295.1	496800	498341	D	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase	496800..498341	Mycoplasma hyopneumoniae J	3563287
YP_279207.1	CDS	MHJ_0410	NC_007295.1	498338	499213	R	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	complement(498338..499213)	Mycoplasma hyopneumoniae J	3563288
YP_279208.1	CDS	rnc	NC_007295.1	499414	500097	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0571; ribonuclease III	complement(499414..500097)	Mycoplasma hyopneumoniae J	3563289
YP_279209.1	CDS	MHJ_0412	NC_007295.1	500162	500719	R	hypothetical protein	complement(500162..500719)	Mycoplasma hyopneumoniae J	3563290
YP_279210.1	CDS	MHJ_0413	NC_007295.1	501028	502551	D	hypothetical protein	501028..502551	Mycoplasma hyopneumoniae J	3563291
YP_279211.1	CDS	asnC	NC_007295.1	503044	504393	D	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase	503044..504393	Mycoplasma hyopneumoniae J	3563292
YP_279212.1	CDS	MHJ_0415	NC_007295.1	504455	505045	D	hypothetical protein	504455..505045	Mycoplasma hyopneumoniae J	3563293
YP_279213.1	CDS	pcrA	NC_007295.1	505062	507308	D	identified by sequence similarity; ORF located using Blastx; COG0210; ATP-dependent helicase PcrA	505062..507308	Mycoplasma hyopneumoniae J	3563294
YP_279214.1	CDS	MHJ_0417	NC_007295.1	507310	508734	D	hypothetical protein	507310..508734	Mycoplasma hyopneumoniae J	3563295
YP_279215.1	CDS	ruvA	NC_007295.1	508838	509503	D	plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA	508838..509503	Mycoplasma hyopneumoniae J	3563296
YP_279216.1	CDS	ruvB	NC_007295.1	509499	510437	D	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB	509499..510437	Mycoplasma hyopneumoniae J	3563297
YP_279217.1	CDS	MHJ_0420	NC_007295.1	510453	512276	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(510453..512276)	Mycoplasma hyopneumoniae J	3563298
YP_279218.1	CDS	MHJ_0421	NC_007295.1	512372	513520	R	hypothetical protein	complement(512372..513520)	Mycoplasma hyopneumoniae J	3563299
YP_279219.1	CDS	MHJ_0422	NC_007295.1	513777	514499	R	hypothetical protein	complement(513777..514499)	Mycoplasma hyopneumoniae J	3563300
YP_279220.1	CDS	MHJ_0423	NC_007295.1	514625	516283	R	identified by sequence similarity; ORF located using Blastx; COG2189; type III restriction-modification system: methylase	complement(514625..516283)	Mycoplasma hyopneumoniae J	3563301
YP_279221.1	CDS	MHJ_0424	NC_007295.1	516642	516989	R	hypothetical protein	complement(516642..516989)	Mycoplasma hyopneumoniae J	3563302
YP_279222.1	CDS	efp	NC_007295.1	517247	517804	D	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P	517247..517804	Mycoplasma hyopneumoniae J	3563303
YP_279223.1	CDS	tkt	NC_007295.1	517842	519689	D	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase	517842..519689	Mycoplasma hyopneumoniae J	3563304
YP_279224.1	CDS	MHJ_0427	NC_007295.1	519847	520758	D	hypothetical protein	519847..520758	Mycoplasma hyopneumoniae J	3563305
YP_279225.1	CDS	mnmA	NC_007295.1	520758	521876	D	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA	520758..521876	Mycoplasma hyopneumoniae J	3563306
YP_279226.1	CDS	MHJ_0429	NC_007295.1	521916	523145	R	identified by sequence similarity; ORF located using Blastx; COG1881; hypothetical protein	complement(521916..523145)	Mycoplasma hyopneumoniae J	3563307
YP_279227.1	CDS	MHJ_0430	NC_007295.1	523347	524744	R	hypothetical protein	complement(523347..524744)	Mycoplasma hyopneumoniae J	3563609
YP_279228.1	CDS	MHJ_0431	NC_007295.1	524949	526868	R	hypothetical protein	complement(524949..526868)	Mycoplasma hyopneumoniae J	3563610
YP_279229.1	CDS	MHJ_0432	NC_007295.1	526991	527494	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(526991..527494)	Mycoplasma hyopneumoniae J	3563611
YP_279230.1	CDS	MHJ_0433	NC_007295.1	527496	528338	R	identified by sequence similarity; ORF located using Blastx; COG0561; hypothetical protein	complement(527496..528338)	Mycoplasma hyopneumoniae J	3563612
YP_279231.1	CDS	araD	NC_007295.1	528376	529098	R	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase	complement(528376..529098)	Mycoplasma hyopneumoniae J	3563613
YP_279232.1	CDS	sgaU	NC_007295.1	529088	529972	R	UlaE; catalyzes the epimerization of L-ribulose-5-phosphate into L-xylulose-5-phosphate; part of the anaerobic L-ascorbate degradation pathway; L-xylulose 5-phosphate 3-epimerase	complement(529088..529972)	Mycoplasma hyopneumoniae J	3563544
YP_279233.1	CDS	ulaD	NC_007295.1	529953	530621	R	catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase	complement(529953..530621)	Mycoplasma hyopneumoniae J	3563545
YP_279234.1	CDS	MHJ_0437	NC_007295.1	530936	533023	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(530936..533023)	Mycoplasma hyopneumoniae J	3563546
YP_279235.1	CDS	MHJ_0438	NC_007295.1	533223	534812	R	hypothetical protein	complement(533223..534812)	Mycoplasma hyopneumoniae J	3563547
YP_279236.1	CDS	MHJ_0439	NC_007295.1	535032	536690	D	identified by sequence similarity; ORF located using Blastx; transposase	535032..536690	Mycoplasma hyopneumoniae J	3563548
YP_279237.1	CDS	MHJ_0440	NC_007295.1	536765	537043	D	hypothetical protein	536765..537043	Mycoplasma hyopneumoniae J	3563549
YP_279238.1	CDS	MHJ_0441	NC_007295.1	537119	539035	R	hypothetical protein	complement(537119..539035)	Mycoplasma hyopneumoniae J	3563550
YP_279239.1	CDS	MHJ_0442	NC_007295.1	539756	544771	R	hypothetical protein	complement(539756..544771)	Mycoplasma hyopneumoniae J	3563551
YP_279240.1	CDS	MHJ_0443	NC_007295.1	544822	551238	R	hypothetical protein	complement(544822..551238)	Mycoplasma hyopneumoniae J	3563552
YP_279241.1	CDS	MHJ_0444	NC_007295.1	551339	556051	R	hypothetical protein	complement(551339..556051)	Mycoplasma hyopneumoniae J	3563553
YP_279242.1	CDS	MHJ_0445	NC_007295.1	556075	563295	R	hypothetical protein	complement(556075..563295)	Mycoplasma hyopneumoniae J	3563554
YP_279243.1	CDS	engB	NC_007295.1	563611	564165	R	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC	complement(563611..564165)	Mycoplasma hyopneumoniae J	3563555
YP_279244.1	CDS	MHJ_0447	NC_007295.1	564349	565089	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1692; hypothetical protein	complement(564349..565089)	Mycoplasma hyopneumoniae J	3563556
YP_279245.1	CDS	metK	NC_007295.1	565392	566525	R	methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase	complement(565392..566525)	Mycoplasma hyopneumoniae J	3563557
YP_279246.1	CDS	MHJ_0449	NC_007295.1	566618	567502	R	identified by sequence similarity; ORF located using Blastx; COG1136; ABC transporter ATP-binding protein	complement(566618..567502)	Mycoplasma hyopneumoniae J	3563558
YP_279247.1	CDS	MHJ_0450	NC_007295.1	567623	575605	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(567623..575605)	Mycoplasma hyopneumoniae J	3563559
YP_279248.1	CDS	acpD	NC_007295.1	575771	576355	D	identified by sequence similarity; ORF located using Blastx; COG1182; ACP phosphodieterase	575771..576355	Mycoplasma hyopneumoniae J	3563560
YP_279249.1	CDS	acpD-1	NC_007295.1	576369	576974	D	identified by sequence similarity; ORF located using Blastx; COG1182; TC:3.A.1.1.10; ACP phosphodieterase	576369..576974	Mycoplasma hyopneumoniae J	3563561
YP_279250.1	CDS	rpmE	NC_007295.1	577033	577254	D	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31	577033..577254	Mycoplasma hyopneumoniae J	3563562
YP_279251.1	CDS	napA	NC_007295.1	577275	577709	D	identified by sequence similarity; ORF located using Blastx; COG0783; neutrophil activating factor	577275..577709	Mycoplasma hyopneumoniae J	3563563
YP_279252.1	CDS	rluD	NC_007295.1	577732	578601	D	identified by sequence similarity; ORF located using Blastx; COG0564; ribosomal large subunit pseudouridine synthase D	577732..578601	Mycoplasma hyopneumoniae J	3563564
YP_279253.1	CDS	rplA	NC_007295.1	578662	579357	R	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1	complement(578662..579357)	Mycoplasma hyopneumoniae J	3563565
YP_279254.1	CDS	rplK	NC_007295.1	579359	579808	R	binds directly to 23S ribosomal RNA; 50S ribosomal protein L11	complement(579359..579808)	Mycoplasma hyopneumoniae J	3563566
YP_279255.1	CDS	MHJ_0458	NC_007295.1	580400	580897	D	hypothetical protein	580400..580897	Mycoplasma hyopneumoniae J	3563567
YP_279256.1	CDS	MHJ_0459	NC_007295.1	581234	581794	D	hypothetical protein	581234..581794	Mycoplasma hyopneumoniae J	3563568
YP_279257.1	CDS	MHJ_0460	NC_007295.1	582217	584469	D	hypothetical protein	582217..584469	Mycoplasma hyopneumoniae J	3563569
YP_279258.1	CDS	pepA	NC_007295.1	584676	586037	R	identified by sequence similarity; ORF located using Blastx; COG0260; leucyl aminopeptidase	complement(584676..586037)	Mycoplasma hyopneumoniae J	3563570
YP_279259.1	CDS	trmB	NC_007295.1	586199	586804	R	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase	complement(586199..586804)	Mycoplasma hyopneumoniae J	3563571
YP_279260.1	CDS	MHJ_0463	NC_007295.1	586828	587634	R	hypothetical protein	complement(586828..587634)	Mycoplasma hyopneumoniae J	3563572
YP_279261.1	CDS	MHJ_0464	NC_007295.1	587760	588701	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(587760..588701)	Mycoplasma hyopneumoniae J	3563573
YP_279262.1	CDS	MHJ_0465	NC_007295.1	588706	590772	R	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	complement(588706..590772)	Mycoplasma hyopneumoniae J	3563574
YP_279263.1	CDS	MHJ_0466	NC_007295.1	590769	591443	R	identified by sequence similarity; ORF located using Blastx; COG1131; ABC transporter atp-binding protein	complement(590769..591443)	Mycoplasma hyopneumoniae J	3563842
YP_279264.1	CDS	MHJ_0467	NC_007295.1	591486	593267	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1277; hypothetical protein	complement(591486..593267)	Mycoplasma hyopneumoniae J	3563843
YP_279265.1	CDS	MHJ_0468	NC_007295.1	593469	594362	D	identified by sequence similarity; ORF located using Blastx; COG0039; hypothetical protein	593469..594362	Mycoplasma hyopneumoniae J	3563844
YP_279266.1	CDS	ptsI	NC_007295.1	594437	596173	D	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG1080; TC:8.A.7.1.1; phosphoenolpyruvate-protein phosphotransferase	594437..596173	Mycoplasma hyopneumoniae J	3563845
YP_279267.1	CDS	nadE	NC_007295.1	596348	597088	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0171; TC:3.A.1.123.4; NH(3)-dependent NAD+ synthetase	596348..597088	Mycoplasma hyopneumoniae J	3563846
YP_279268.1	CDS	MHJ_0471	NC_007295.1	597088	597816	D	identified by sequence similarity; ORF located using Blastx; COG0217; hypothetical protein	597088..597816	Mycoplasma hyopneumoniae J	3563847
YP_279269.1	CDS	pfs	NC_007295.1	597846	598475	R	Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	complement(597846..598475)	Mycoplasma hyopneumoniae J	3563920
YP_279270.2	CDS	nadD	NC_007295.1	598483	599568	R	catalyzes the reversible adenylation of nicotinate mononucleotide to nicotinic acid adenine dinucleotide; nicotinate-nucleotide adenylyltransferase	complement(598483..599568)	Mycoplasma hyopneumoniae J	3563378
YP_279271.1	CDS	MHJ_0474	NC_007295.1	599572	600492	R	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG0561; hypothetical protein	complement(599572..600492)	Mycoplasma hyopneumoniae J	3563379
YP_279272.2	CDS	atpD-1	NC_007295.1	601055	602428	R	produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta	complement(601055..602428)	Mycoplasma hyopneumoniae J	3563380
YP_279273.1	CDS	atpA	NC_007295.1	602431	603969	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha	complement(602431..603969)	Mycoplasma hyopneumoniae J	3563381
YP_279274.1	CDS	MHJ_0477	NC_007295.1	603969	606119	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(603969..606119)	Mycoplasma hyopneumoniae J	3563382
YP_279275.1	CDS	MHJ_0478	NC_007295.1	606196	606666	R	hypothetical protein	complement(606196..606666)	Mycoplasma hyopneumoniae J	3563383
YP_279276.1	CDS	MHJ_0479	NC_007295.1	606667	607536	R	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	complement(606667..607536)	Mycoplasma hyopneumoniae J	3563384
YP_279277.1	CDS	MHJ_0480	NC_007295.1	607552	608118	R	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	complement(607552..608118)	Mycoplasma hyopneumoniae J	3563385
YP_279278.1	CDS	MHJ_0481	NC_007295.1	608131	609711	R	hypothetical protein	complement(608131..609711)	Mycoplasma hyopneumoniae J	3563386
YP_279279.1	CDS	MHJ_0482	NC_007295.1	610004	610807	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0561; hypothetical protein	610004..610807	Mycoplasma hyopneumoniae J	3563387
YP_279280.1	CDS	MHJ_0483	NC_007295.1	610852	611556	R	hypothetical protein	complement(610852..611556)	Mycoplasma hyopneumoniae J	3563388
YP_279281.1	CDS	mgtE	NC_007295.1	611657	613111	R	identified by sequence similarity; ORF located using Blastx; COG2239; TC:9.A.19.1.1; MG2+ transport protein	complement(611657..613111)	Mycoplasma hyopneumoniae J	3563389
YP_279282.1	CDS	MHJ_0485	NC_007295.1	613127	613738	R	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG1624; hypothetical protein	complement(613127..613738)	Mycoplasma hyopneumoniae J	3563390
YP_279283.1	CDS	MHJ_0486	NC_007295.1	613971	616610	R	hypothetical protein	complement(613971..616610)	Mycoplasma hyopneumoniae J	3563391
YP_279284.1	CDS	pgk	NC_007295.1	617070	618284	D	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase	617070..618284	Mycoplasma hyopneumoniae J	3563661
YP_279285.1	CDS	MHJ_0488	NC_007295.1	618459	618713	D	hypothetical protein	618459..618713	Mycoplasma hyopneumoniae J	3563862
YP_279286.1	CDS	fruA	NC_007295.1	618830	620812	D	identified by sequence similarity; ORF located using Blastx; COG1299; TC:4.A.2.1.1; PTS system fructose-specific transporter subunit IIABC	618830..620812	Mycoplasma hyopneumoniae J	3563662
YP_279287.1	CDS	MHJ_0490	NC_007295.1	620812	621096	D	hypothetical protein	620812..621096	Mycoplasma hyopneumoniae J	3563663
YP_279288.1	CDS	MHJ_0491	NC_007295.1	621108	622031	D	identified by sequence similarity; ORF located using Blastx; COG1482; mannose-6-phosphate isomerase	621108..622031	Mycoplasma hyopneumoniae J	3563909
YP_279289.1	CDS	MHJ_0492	NC_007295.1	622335	623993	D	identified by sequence similarity; ORF located using Blastx; COG1057; ISMHp1 transposase	622335..623993	Mycoplasma hyopneumoniae J	3563910
YP_279290.1	CDS	MHJ_0493	NC_007295.1	624355	629991	R	identified by sequence similarity; ORF located using Blastx; P216 surface protein	complement(624355..629991)	Mycoplasma hyopneumoniae J	3563911
YP_279291.1	CDS	MHJ_0494	NC_007295.1	630118	634401	R	identified by sequence similarity; ORF located using Blastx; TC:1.A.1.5.2; p76 membrane protein precursor	complement(630118..634401)	Mycoplasma hyopneumoniae J	3563912
YP_279292.1	CDS	MHJ_0495	NC_007295.1	634692	635918	R	identified by sequence similarity; ORF located using Blastx; COG0477; TC:2.A.1.2.5; hypothetical protein	complement(634692..635918)	Mycoplasma hyopneumoniae J	3563913
YP_279293.1	CDS	MHJ_0496	NC_007295.1	635956	637584	R	hypothetical protein	complement(635956..637584)	Mycoplasma hyopneumoniae J	3563914
YP_279294.1	CDS	MHJ_0497	NC_007295.1	637586	638548	R	AS-AR; AsnRS2; similar to asparaginyl-tRNA synthetase but lacking the N-terminal anticodon-binding site; the enzyme from Pyrococcus converts aspartic acid into asparagine; asparagine synthetase A	complement(637586..638548)	Mycoplasma hyopneumoniae J	3563915
YP_279295.1	CDS	oppF	NC_007295.1	638850	641177	R	identified by sequence similarity; ORF located using Glimmer; Blastx; oligopeptide ABC transporter ATP-binding protein	complement(638850..641177)	Mycoplasma hyopneumoniae J	3563271
YP_279296.1	CDS	oppD	NC_007295.1	641174	642226	R	identified by sequence similarity; ORF located using Blastx; COG0444; TC:3.A.1.5.2; oligopeptide ABC transporte ATP-binding protein	complement(641174..642226)	Mycoplasma hyopneumoniae J	3563272
YP_279297.1	CDS	oppC	NC_007295.1	642226	643383	R	identified by sequence similarity; ORF located using Blastx; COG1173; oligopeptide transport system permease	complement(642226..643383)	Mycoplasma hyopneumoniae J	3563273
YP_279298.1	CDS	oppB	NC_007295.1	643376	644410	R	identified by sequence similarity; ORF located using Blastx; COG0601; TC:3.A.1.5.2; oligopeptide ABC transporter permease	complement(643376..644410)	Mycoplasma hyopneumoniae J	3563274
YP_279299.1	CDS	MHJ_0502	NC_007295.1	644416	647232	R	identified by sequence similarity; ORF located using Blastx; lipoprotein	complement(644416..647232)	Mycoplasma hyopneumoniae J	3563275
YP_279300.1	CDS	pdhC	NC_007295.1	648264	649184	D	unlike PdhC proteins from other organisms, some Mycoplasma lack an N-terminal lipoyl domain; in Mycoplasma hyopneumonia the PdhD proteins contains the lipoyl domain; dihydrolipoamide acetyltransferase	648264..649184	Mycoplasma hyopneumoniae J	3563276
YP_279301.1	CDS	pdhD	NC_007295.1	649184	651031	D	identified by sequence similarity; ORF located using Blastx; COG1249; TC:3.D.1.1.1; dihydrolipoamide dehydrogenase	649184..651031	Mycoplasma hyopneumoniae J	3563277
YP_279302.1	CDS	ackA	NC_007295.1	651263	652471	R	Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation; acetate kinase	complement(651263..652471)	Mycoplasma hyopneumoniae J	3563728
YP_279303.1	CDS	eutD	NC_007295.1	652471	653424	R	in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase	complement(652471..653424)	Mycoplasma hyopneumoniae J	3563729
YP_279304.1	CDS	MHJ_0507	NC_007295.1	653544	654557	R	hypothetical protein	complement(653544..654557)	Mycoplasma hyopneumoniae J	3563730
YP_279305.1	CDS	MHJ_0508	NC_007295.1	654562	654981	R	hypothetical protein	complement(654562..654981)	Mycoplasma hyopneumoniae J	3563731
YP_279306.1	CDS	MHJ_0509	NC_007295.1	655206	655577	R	hypothetical protein	complement(655206..655577)	Mycoplasma hyopneumoniae J	3563732
YP_279307.1	CDS	MHJ_0510	NC_007295.1	655579	656391	R	hypothetical protein	complement(655579..656391)	Mycoplasma hyopneumoniae J	3563733
YP_279308.1	CDS	MHJ_0511	NC_007295.1	656714	657973	D	identified by sequence similarity; ORF located using Blastx; COG4213; hypothetical protein	656714..657973	Mycoplasma hyopneumoniae J	3563734
YP_279309.1	CDS	xylG	NC_007295.1	658093	659637	D	identified by sequence similarity; ORF located using Blastx; COG1129; xylose ABC transporter ATP-binding protein	658093..659637	Mycoplasma hyopneumoniae J	3563735
YP_279310.1	CDS	xylH	NC_007295.1	659637	660887	D	identified by sequence similarity; ORF located using Blastx; COG4214; TC:3.A.1.2.5; xylose ABC transporter permease	659637..660887	Mycoplasma hyopneumoniae J	3563736
YP_279311.1	CDS	MHJ_0514	NC_007295.1	660892	661455	D	hypothetical protein	660892..661455	Mycoplasma hyopneumoniae J	3563737
YP_279312.1	CDS	glck	NC_007295.1	661466	662335	D	identified by sequence similarity; ORF located using Blastx; COG1940; glucokinase	661466..662335	Mycoplasma hyopneumoniae J	3563660
YP_279313.1	CDS	MHJ_0516	NC_007295.1	662575	662826	R	hypothetical protein	complement(662575..662826)	Mycoplasma hyopneumoniae J	3563873
YP_279314.1	CDS	MHJ_0517	NC_007295.1	662913	664571	D	identified by sequence similarity; ORF located using Blastx; ISMHp1 transposase	662913..664571	Mycoplasma hyopneumoniae J	3563874
YP_279315.1	CDS	MHJ_0518	NC_007295.1	664639	665460	R	hypothetical protein	complement(664639..665460)	Mycoplasma hyopneumoniae J	3563875
YP_279316.1	CDS	MHJ_0519	NC_007295.1	665604	666467	R	hypothetical protein	complement(665604..666467)	Mycoplasma hyopneumoniae J	3563876
YP_279317.1	CDS	MHJ_0520	NC_007295.1	666526	666897	R	hypothetical protein	complement(666526..666897)	Mycoplasma hyopneumoniae J	3563877
YP_279318.1	CDS	MHJ_0521	NC_007295.1	667156	667428	R	hypothetical protein	complement(667156..667428)	Mycoplasma hyopneumoniae J	3563878
YP_279319.1	CDS	pepF	NC_007295.1	667980	669824	R	identified by sequence similarity; ORF located using Blastx; COG1164; oligoendopeptidase F	complement(667980..669824)	Mycoplasma hyopneumoniae J	3563879
YP_279320.1	CDS	MHJ_0523	NC_007295.1	669939	675953	D	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	669939..675953	Mycoplasma hyopneumoniae J	3563880
YP_279321.1	CDS	tuf	NC_007295.1	676055	677263	R	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	complement(676055..677263)	Mycoplasma hyopneumoniae J	3563881
YP_279322.1	CDS	lon	NC_007295.1	677562	680180	R	identified by sequence similarity; ORF located using Glimmer; GeneMark; Blastx; COG0466; heat shock ATP-dependent protease	complement(677562..680180)	Mycoplasma hyopneumoniae J	3563882
YP_279323.1	CDS	MHJ_0526	NC_007295.1	680345	681040	R	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	complement(680345..681040)	Mycoplasma hyopneumoniae J	3563883
YP_279324.1	CDS	upp	NC_007295.1	681043	681657	R	identified by sequence similarity; ORF located using Blastx; COG0035; uracil phosphoribosyltransferase	complement(681043..681657)	Mycoplasma hyopneumoniae J	3563884
YP_279325.1	CDS	deoC	NC_007295.1	681750	682415	R	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase	complement(681750..682415)	Mycoplasma hyopneumoniae J	3563885
YP_279326.1	CDS	gyrA	NC_007295.1	682812	685418	D	negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A	682812..685418	Mycoplasma hyopneumoniae J	3563886
YP_279327.1	CDS	pmsR	NC_007295.1	685469	685897	R	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B	complement(685469..685897)	Mycoplasma hyopneumoniae J	3563887
YP_279328.1	CDS	MHJ_0531	NC_007295.1	685973	686437	R	hypothetical protein	complement(685973..686437)	Mycoplasma hyopneumoniae J	3563888
YP_279329.1	CDS	pgi	NC_007295.1	686494	687783	R	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase	complement(686494..687783)	Mycoplasma hyopneumoniae J	3563889
YP_279330.1	CDS	polC	NC_007295.1	687922	692328	R	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC	complement(687922..692328)	Mycoplasma hyopneumoniae J	3563890
YP_279331.1	CDS	MHJ_0534	NC_007295.1	692362	693288	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0575; phosphatidate cytidylyltransferase synthase	complement(692362..693288)	Mycoplasma hyopneumoniae J	3563891
YP_279332.1	CDS	frr	NC_007295.1	693290	693814	R	identified by sequence similarity; ORF located using Blastx; COG0233; ribosome recycling factor	complement(693290..693814)	Mycoplasma hyopneumoniae J	3563892
YP_279333.1	CDS	pyrH	NC_007295.1	693854	694564	R	Catalyzes the phosphorylation of UMP to UDP; uridylate kinase	complement(693854..694564)	Mycoplasma hyopneumoniae J	3563893
YP_279334.1	CDS	MHJ_0537	NC_007295.1	694685	696073	D	hypothetical protein	694685..696073	Mycoplasma hyopneumoniae J	3563894
YP_279335.1	CDS	MHJ_0538	NC_007295.1	696109	696639	D	identified by sequence similarity; ORF located using Blastx; COG1214; hypothetical protein	696109..696639	Mycoplasma hyopneumoniae J	3563895
YP_279336.1	CDS	MHJ_0539	NC_007295.1	696785	698443	R	identified by sequence similarity; ORF located using Blastx; ISMHp1 transposase	complement(696785..698443)	Mycoplasma hyopneumoniae J	3563896
YP_279337.1	CDS	MHJ_0540	NC_007295.1	698614	699465	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(698614..699465)	Mycoplasma hyopneumoniae J	3563897
YP_279338.1	CDS	MHJ_0541	NC_007295.1	699486	701156	R	identified by sequence similarity; ORF located using Blastx; COG0687; hypothetical protein	complement(699486..701156)	Mycoplasma hyopneumoniae J	3563898
YP_279339.1	CDS	potC	NC_007295.1	701186	702010	R	identified by sequence similarity; ORF located using Blastx; COG1177; TC:3.A.1.11.1; spermidine/putrescine ABC transporter permease	complement(701186..702010)	Mycoplasma hyopneumoniae J	3563899
YP_279340.1	CDS	potB	NC_007295.1	702003	702812	R	identified by sequence similarity; ORF located using Blastx; COG1176; TC:3.A.1.11.1; spermidine/putrescine ABC transporter permease	complement(702003..702812)	Mycoplasma hyopneumoniae J	3563900
YP_279341.1	CDS	potA	NC_007295.1	702850	704184	R	identified by sequence similarity; ORF located using GeneMark; Blastx; COG3842; spermidine/putrescine transport system ATP-binding protein	complement(702850..704184)	Mycoplasma hyopneumoniae J	3563308
YP_279343.1	CDS	MHJ_0546	NC_007295.1	705179	705439	D	hypothetical protein	705179..705439	Mycoplasma hyopneumoniae J	3563310
YP_279344.1	CDS	MHJ_0547	NC_007295.1	705470	706879	D	hypothetical protein	705470..706879	Mycoplasma hyopneumoniae J	3563311
YP_279345.1	CDS	ktrA	NC_007295.1	706960	707655	R	identified by sequence similarity; ORF located using Blastx; COG0569; potassium uptake protein	complement(706960..707655)	Mycoplasma hyopneumoniae J	3563312
YP_279346.1	CDS	ktrB	NC_007295.1	707953	709437	D	identified by sequence similarity; ORF located using Blastx; COG0168; TC:2.A.38.4.1; potassium uptake protein	707953..709437	Mycoplasma hyopneumoniae J	3563313
YP_279347.1	CDS	MHJ_0550	NC_007295.1	709745	711403	R	identified by sequence similarity; ORF located using Blastx; ISMHp1 transposase	complement(709745..711403)	Mycoplasma hyopneumoniae J	3563314
YP_279348.1	CDS	MHJ_0551	NC_007295.1	711672	715697	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(711672..715697)	Mycoplasma hyopneumoniae J	3563315
YP_279349.1	CDS	mtlF	NC_007295.1	716116	716544	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG4668; PTS system mannitol-specific transporter subunit IIA	complement(716116..716544)	Mycoplasma hyopneumoniae J	3563316
YP_279350.1	CDS	mtlD	NC_007295.1	716535	717647	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0246; mannitol-1-phosphate 5-dehydrogenase	complement(716535..717647)	Mycoplasma hyopneumoniae J	3563317
YP_279351.1	CDS	mtlA	NC_007295.1	717638	719113	R	identified by sequence similarity; ORF located using Blastx; COG2213; TC:4.A.2.1.2; PTS system mannitol-specific transporter subunit IIBC	complement(717638..719113)	Mycoplasma hyopneumoniae J	3563318
YP_279352.1	CDS	MHJ_0555	NC_007295.1	719140	719925	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1737; hypothetical protein	719140..719925	Mycoplasma hyopneumoniae J	3563319
YP_279353.1	CDS	ulaA	NC_007295.1	720244	721758	R	membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC	complement(720244..721758)	Mycoplasma hyopneumoniae J	3563320
YP_279354.1	CDS	MHJ_0557	NC_007295.1	721774	722049	R	identified by sequence similarity; ORF located using Blastx; COG3414; PTS system galactitol-specific transporter subunit IIB	complement(721774..722049)	Mycoplasma hyopneumoniae J	3563321
YP_279355.1	CDS	MHJ_0558	NC_007295.1	722039	722455	R	identified by sequence similarity; ORF located using Blastx; PTS system transporter subunit IIA	complement(722039..722455)	Mycoplasma hyopneumoniae J	3563322
YP_279356.1	CDS	MHJ_0559	NC_007295.1	722796	723452	R	hypothetical protein	complement(722796..723452)	Mycoplasma hyopneumoniae J	3563323
YP_279357.1	CDS	MHJ_0560	NC_007295.1	724067	724723	R	identified by sequence similarity; ORF located using Blastx; COG0036; d-ribulose-5-phosphate 3 epimerase	complement(724067..724723)	Mycoplasma hyopneumoniae J	3563324
YP_279358.1	CDS	MHJ_0561	NC_007295.1	725485	727164	R	hypothetical protein	complement(725485..727164)	Mycoplasma hyopneumoniae J	3563325
YP_279359.1	CDS	MHJ_0562	NC_007295.1	727226	727675	R	hypothetical protein	complement(727226..727675)	Mycoplasma hyopneumoniae J	3563326
YP_279360.1	CDS	MHJ_0564	NC_007295.1	729302	730960	D	identified by sequence similarity; ORF located using Blastx; ISMHp1 transposase	729302..730960	Mycoplasma hyopneumoniae J	3563328
YP_279361.1	CDS	MHJ_0565	NC_007295.1	731395	733074	R	hypothetical protein	complement(731395..733074)	Mycoplasma hyopneumoniae J	3563329
YP_279362.1	CDS	MHJ_0566	NC_007295.1	733136	733585	R	hypothetical protein	complement(733136..733585)	Mycoplasma hyopneumoniae J	3563330
YP_279363.1	CDS	MHJ_0568	NC_007295.1	735198	735866	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0265; hypothetical protein	735198..735866	Mycoplasma hyopneumoniae J	3563332
YP_279364.1	CDS	MHJ_0569	NC_007295.1	735996	736223	R	identified by sequence similarity; ORF located using Blastx; COG1249; hypothetical protein	complement(735996..736223)	Mycoplasma hyopneumoniae J	3563333
YP_279365.1	CDS	MHJ_0570	NC_007295.1	736231	736926	R	hypothetical protein	complement(736231..736926)	Mycoplasma hyopneumoniae J	3563334
YP_279366.1	CDS	MHJ_0571	NC_007295.1	736992	738881	R	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	complement(736992..738881)	Mycoplasma hyopneumoniae J	3563335
YP_279367.1	CDS	pdhD-1	NC_007295.1	739135	740499	R	Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase	complement(739135..740499)	Mycoplasma hyopneumoniae J	3563336
YP_279368.1	CDS	nagA	NC_007295.1	740682	741842	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1820; N-acetylglucosamine-6-phosphate deacetylase	740682..741842	Mycoplasma hyopneumoniae J	3563337
YP_279369.1	CDS	fba-1	NC_007295.1	741897	742718	R	identified by sequence similarity; ORF located using Blastx; COG0191; fructose-bisphosphate aldolase	complement(741897..742718)	Mycoplasma hyopneumoniae J	3563338
YP_279370.1	CDS	MHJ_0575	NC_007295.1	742727	744436	R	identified by sequence similarity; ORF located using Blastx; COG1263; TC:4.A.1.1.2; PTS system N-acetylglucosamine-specific transporter subunit IIABC	complement(742727..744436)	Mycoplasma hyopneumoniae J	3563339
YP_279371.1	CDS	nagB	NC_007295.1	744532	745296	R	catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase	complement(744532..745296)	Mycoplasma hyopneumoniae J	3563340
YP_279372.1	CDS	rpsD	NC_007295.1	745664	746281	D	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4	745664..746281	Mycoplasma hyopneumoniae J	3563341
YP_279373.1	CDS	rpiB	NC_007295.1	746395	746829	D	catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B	746395..746829	Mycoplasma hyopneumoniae J	3563342
YP_279374.1	CDS	fpg	NC_007295.1	746829	747656	D	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase	746829..747656	Mycoplasma hyopneumoniae J	3563343
YP_279375.1	CDS	MHJ_0580	NC_007295.1	747767	748438	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0510; hypothetical protein	complement(747767..748438)	Mycoplasma hyopneumoniae J	3563344
YP_279376.1	CDS	mnuA	NC_007295.1	748465	749598	R	identified by sequence similarity; ORF located using Blastx; membrane nuclease, lipoprotein	complement(748465..749598)	Mycoplasma hyopneumoniae J	3563345
YP_279377.1	CDS	MHJ_0582	NC_007295.1	749620	750504	R	identified by sequence similarity; ORF located using Blastx; COG0258; 5'-3' exonuclease	complement(749620..750504)	Mycoplasma hyopneumoniae J	3563346
YP_279378.1	CDS	dnaE	NC_007295.1	750507	753452	R	catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE	complement(750507..753452)	Mycoplasma hyopneumoniae J	3563505
YP_279379.1	CDS	rbfA	NC_007295.1	753503	753832	R	identified by sequence similarity; ORF located using Blastx; COG0858; ribosome-binding factor A	complement(753503..753832)	Mycoplasma hyopneumoniae J	3563506
YP_279380.1	CDS	infB	NC_007295.1	753844	755643	R	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2	complement(753844..755643)	Mycoplasma hyopneumoniae J	3563507
YP_279381.1	CDS	nusA	NC_007295.1	755910	757763	R	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA	complement(755910..757763)	Mycoplasma hyopneumoniae J	3563508
YP_279382.1	CDS	pulA	NC_007295.1	758275	760281	D	identified by sequence similarity; ORF located using Blastx; COG1523; pullulanase	758275..760281	Mycoplasma hyopneumoniae J	3563509
YP_279383.1	CDS	glpD	NC_007295.1	760382	761527	R	identified by sequence similarity; ORF located using Blastx; COG0579; glycerol-3-phosphate dehydrogenase	complement(760382..761527)	Mycoplasma hyopneumoniae J	3563510
YP_279384.1	CDS	thrS	NC_007295.1	762018	763757	R	catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase	complement(762018..763757)	Mycoplasma hyopneumoniae J	3563511
YP_279385.1	CDS	trpS	NC_007295.1	763761	764747	R	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase	complement(763761..764747)	Mycoplasma hyopneumoniae J	3563512
YP_279386.1	CDS	MHJ_0591	NC_007295.1	764805	765167	D	identified by sequence similarity; ORF located using Blastx; COG1264; PTS system glucose-specific transporter subunit IIB	764805..765167	Mycoplasma hyopneumoniae J	3563513
YP_279387.1	CDS	MHJ_0592	NC_007295.1	765210	768404	D	identified by sequence similarity; ORF located using Blastx; COG1112; ATP-binding protein	765210..768404	Mycoplasma hyopneumoniae J	3563514
YP_279388.1	CDS	rnhB	NC_007295.1	768394	769137	D	identified by sequence similarity; ORF located using Blastx; COG1039; ribonuclease HII	768394..769137	Mycoplasma hyopneumoniae J	3563515
YP_279389.1	CDS	MHJ_0594	NC_007295.1	769175	769423	D	identified by sequence similarity; ORF located using Blastx; COG3763; hypothetical protein	769175..769423	Mycoplasma hyopneumoniae J	3563516
YP_279390.1	CDS	pgm	NC_007295.1	769431	770948	D	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase	769431..770948	Mycoplasma hyopneumoniae J	3563517
YP_279391.1	CDS	MHJ_0596	NC_007295.1	771095	772486	D	hypothetical protein	771095..772486	Mycoplasma hyopneumoniae J	3563518
YP_279392.1	CDS	MHJ_0597	NC_007295.1	772530	774245	D	hypothetical protein	772530..774245	Mycoplasma hyopneumoniae J	3563519
YP_279393.1	CDS	MHJ_0598	NC_007295.1	774413	775837	D	hypothetical protein	774413..775837	Mycoplasma hyopneumoniae J	3563520
YP_279394.1	CDS	MHJ_0599	NC_007295.1	775914	777599	D	hypothetical protein	775914..777599	Mycoplasma hyopneumoniae J	3563521
YP_279395.1	CDS	MHJ_0600	NC_007295.1	777843	779600	D	hypothetical protein	777843..779600	Mycoplasma hyopneumoniae J	3563522
YP_279396.1	CDS	MHJ_0601	NC_007295.1	779795	781192	D	hypothetical protein	779795..781192	Mycoplasma hyopneumoniae J	3563523
YP_279397.1	CDS	MHJ_0602	NC_007295.1	781331	783037	D	hypothetical protein	781331..783037	Mycoplasma hyopneumoniae J	3563524
YP_279398.1	CDS	MHJ_0603	NC_007295.1	783428	784297	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG1481; hypothetical protein	783428..784297	Mycoplasma hyopneumoniae J	3563525
YP_279399.1	CDS	MHJ_0604	NC_007295.1	784299	785087	D	identified by sequence similarity; ORF located using Blastx; COG0670; hypothetical protein	784299..785087	Mycoplasma hyopneumoniae J	3563526
YP_279400.1	CDS	ppa	NC_007295.1	785138	785695	D	catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase	785138..785695	Mycoplasma hyopneumoniae J	3563527
YP_279401.1	CDS	xylF	NC_007295.1	785962	787305	D	identified by sequence similarity; ORF located using Blastx; COG1744; ABC transporter xylose-binding lipoprotein	785962..787305	Mycoplasma hyopneumoniae J	3563528
YP_279402.1	CDS	MHJ_0607	NC_007295.1	787470	788981	D	identified by sequence similarity; ORF located using Blastx; COG3845; sugar ABC transporter ATP-binding protein	787470..788981	Mycoplasma hyopneumoniae J	3563529
YP_279403.1	CDS	MHJ_0608	NC_007295.1	788984	790696	D	identified by sequence similarity; ORF located using Blastx; COG4603; TC:3.A.1.2.6; ABC transporter protein	788984..790696	Mycoplasma hyopneumoniae J	3563530
YP_279404.1	CDS	MHJ_0609	NC_007295.1	790702	791607	D	identified by sequence similarity; ORF located using Blastx; COG1079; TC:3.A.1.2.1; sugar ABC transporter permease	790702..791607	Mycoplasma hyopneumoniae J	3563531
YP_279405.1	CDS	tdk	NC_007295.1	791666	792220	D	catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase	791666..792220	Mycoplasma hyopneumoniae J	3563532
YP_279406.1	CDS	ptsH	NC_007295.1	792469	792738	D	identified by sequence similarity; ORF located using GeneMark; Blastx; COG1925; phosphocarrier protein HPr	792469..792738	Mycoplasma hyopneumoniae J	3563533
YP_279407.1	CDS	MHJ_0612	NC_007295.1	792932	793552	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG2190; TC:9.A.19.1.1; hypothetical protein	792932..793552	Mycoplasma hyopneumoniae J	3563534
YP_279408.1	CDS	MHJ_0613	NC_007295.1	793881	796259	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(793881..796259)	Mycoplasma hyopneumoniae J	3563535
YP_279409.1	CDS	MHJ_0614	NC_007295.1	796360	798450	R	hypothetical protein	complement(796360..798450)	Mycoplasma hyopneumoniae J	3563536
YP_279410.1	CDS	ddem	NC_007295.1	798962	799951	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0270; cytosine specific DNA methyltransferase	complement(798962..799951)	Mycoplasma hyopneumoniae J	3563537
YP_279411.1	CDS	MHJ_0616	NC_007295.1	800252	800671	R	identified by sequence similarity; ORF located using Blastx; COG0802; hypothetical protein	complement(800252..800671)	Mycoplasma hyopneumoniae J	3563538
YP_279412.1	CDS	rpoC	NC_007295.1	800678	804916	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta'	complement(800678..804916)	Mycoplasma hyopneumoniae J	3563539
YP_279413.1	CDS	rpoB	NC_007295.1	804973	808635	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta	complement(804973..808635)	Mycoplasma hyopneumoniae J	3563540
YP_279414.1	CDS	rplL	NC_007295.1	808850	809215	R	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12	complement(808850..809215)	Mycoplasma hyopneumoniae J	3563541
YP_279415.2	CDS	rplJ	NC_007295.1	809227	809724	R	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10	complement(809227..809724)	Mycoplasma hyopneumoniae J	3563397
YP_279416.1	CDS	MHJ_0621	NC_007295.1	810113	812653	D	identified by sequence similarity; ORF located using Glimmer; Blastx; hypothetical protein	810113..812653	Mycoplasma hyopneumoniae J	3563398
YP_279417.1	CDS	MHJ_0622	NC_007295.1	812724	815144	D	identified by sequence similarity; ORF located using Blastx; lipoprotein	812724..815144	Mycoplasma hyopneumoniae J	3563399
YP_279418.1	CDS	dam	NC_007295.1	815173	816822	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0338; DNA adenine methylase	complement(815173..816822)	Mycoplasma hyopneumoniae J	3563400
YP_279419.1	CDS	MHJ_0624	NC_007295.1	817472	819085	D	identified by sequence similarity; ORF located using Blastx; COG1132; TC:3.A.1.111.2; ABC transporter ATP-binding protein Pr1	817472..819085	Mycoplasma hyopneumoniae J	3563401
YP_279420.1	CDS	MHJ_0625	NC_007295.1	819096	820709	D	identified by sequence similarity; ORF located using Blastx; COG1132; TC:3.A.1.123.1; ABC transporter ATP-binding protein Pr2	819096..820709	Mycoplasma hyopneumoniae J	3563402
YP_279421.1	CDS	MHJ_0627	NC_007295.1	821450	823813	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0286; hypothetical protein	complement(821450..823813)	Mycoplasma hyopneumoniae J	3563404
YP_279422.1	CDS	MHJ_0628	NC_007295.1	824162	825757	D	identified by sequence similarity; ORF located using Blastx; COG1132; TC:3.A.1.111.1; ABC transporter ATP-binding Pr1-like proten	824162..825757	Mycoplasma hyopneumoniae J	3563405
YP_279423.1	CDS	MHJ_0629	NC_007295.1	825799	827382	D	identified by sequence similarity; ORF located using Blastx; COG1132; TC:3.A.1.112.4; ABC transporter ATP-binding Pr2-like protein	825799..827382	Mycoplasma hyopneumoniae J	3563406
YP_279424.1	CDS	MHJ_0630	NC_007295.1	827470	829278	R	identified by sequence similarity; ORF located using Blastx; hypothetical protein	complement(827470..829278)	Mycoplasma hyopneumoniae J	3563407
YP_279425.1	CDS	MHJ_0631	NC_007295.1	829353	831089	R	identified by sequence similarity; ORF located using Blastx; COG0737; 5'-nucleotidase precursor	complement(829353..831089)	Mycoplasma hyopneumoniae J	3563408
YP_279426.1	CDS	plsC	NC_007295.1	831839	832576	D	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0204; 1-acyl-sn-glycerol-3-phosphate acyltransferase	831839..832576	Mycoplasma hyopneumoniae J	3563409
YP_279427.1	CDS	scpA	NC_007295.1	832606	833325	D	functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A	832606..833325	Mycoplasma hyopneumoniae J	3563410
YP_279428.1	CDS	scpB	NC_007295.1	833327	833902	D	functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer; segregation and condensation protein B	833327..833902	Mycoplasma hyopneumoniae J	3563411
YP_279429.1	CDS	MHJ_0635	NC_007295.1	833924	836185	D	identified by sequence similarity; ORF located using Blastx; COG0392; hypothetical protein	833924..836185	Mycoplasma hyopneumoniae J	3563412
YP_279430.1	CDS	gcp	NC_007295.1	836729	837697	R	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease	complement(836729..837697)	Mycoplasma hyopneumoniae J	3563413
YP_279431.1	CDS	nusG	NC_007295.1	838234	838806	R	Modulates Rho-dependent transcription termination; transcription antitermination protein NusG	complement(838234..838806)	Mycoplasma hyopneumoniae J	3563414
YP_279432.1	CDS	secE	NC_007295.1	838826	839164	R	forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE	complement(838826..839164)	Mycoplasma hyopneumoniae J	3563415
YP_279433.1	CDS	MHJ_0639	NC_007295.1	839255	839809	R	hypothetical protein	complement(839255..839809)	Mycoplasma hyopneumoniae J	3563416
YP_279434.1	CDS	MHJ_0640	NC_007295.1	839821	840522	R	identified by sequence similarity; ORF located using Blastx; COG0566; tRNA/rRNA methyltransferase	complement(839821..840522)	Mycoplasma hyopneumoniae J	3563417
YP_279435.1	CDS	cysS	NC_007295.1	840556	841761	R	identified by sequence similarity; ORF located using Blastx; COG0215; cysteinyl-tRNA synthetase	complement(840556..841761)	Mycoplasma hyopneumoniae J	3563418
YP_279436.1	CDS	MHJ_0642	NC_007295.1	841757	842419	R	identified by sequence similarity; ORF located using Blastx; COG1451; hypothetical protein	complement(841757..842419)	Mycoplasma hyopneumoniae J	3563419
YP_279437.1	CDS	MHJ_0643	NC_007295.1	842424	843656	R	identified by sequence similarity; ORF located using Blastx; COG1253; TC:9.B.37.2.1; hemolysin C	complement(842424..843656)	Mycoplasma hyopneumoniae J	3563420
YP_279438.1	CDS	dnaB	NC_007295.1	843656	845047	R	identified by sequence similarity; ORF located using Blastx; COG0305; replicative DNA helicase	complement(843656..845047)	Mycoplasma hyopneumoniae J	3563421
YP_279439.1	CDS	rplI	NC_007295.1	845040	845477	R	in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9	complement(845040..845477)	Mycoplasma hyopneumoniae J	3563422
YP_279440.1	CDS	MHJ_0646	NC_007295.1	845458	847455	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG3887; hypothetical protein	complement(845458..847455)	Mycoplasma hyopneumoniae J	3563423
YP_279441.1	CDS	leuS	NC_007295.1	847459	849831	R	identified by sequence similarity; ORF located using Blastx; COG0495; leucyl-tRNA synthetase	complement(847459..849831)	Mycoplasma hyopneumoniae J	3563424
YP_279442.1	CDS	uvrB	NC_007295.1	850039	852018	D	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B	850039..852018	Mycoplasma hyopneumoniae J	3563425
YP_279443.1	CDS	MHJ_0649	NC_007295.1	852040	852903	D	identified by sequence similarity; ORF located using Blastx; COG0009; hypothetical protein	852040..852903	Mycoplasma hyopneumoniae J	3563426
YP_279444.1	CDS	rpsI	NC_007295.1	853091	853489	R	forms a direct contact with the tRNA during translation; 30S ribosomal protein S9	complement(853091..853489)	Mycoplasma hyopneumoniae J	3563427
YP_279445.1	CDS	rplM	NC_007295.1	853493	853927	R	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13	complement(853493..853927)	Mycoplasma hyopneumoniae J	3563428
YP_279446.1	CDS	ksgA	NC_007295.1	854060	854812	R	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase	complement(854060..854812)	Mycoplasma hyopneumoniae J	3563429
YP_279447.1	CDS	MHJ_0653	NC_007295.1	854820	856082	R	identified by sequence similarity; ORF located using Glimmer; Blastx; COG0084; hypothetical protein	complement(854820..856082)	Mycoplasma hyopneumoniae J	3563430
YP_279448.1	CDS	prsA	NC_007295.1	856169	857155	D	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase	856169..857155	Mycoplasma hyopneumoniae J	3563916
YP_279449.1	CDS	gidB	NC_007295.1	857178	857786	D	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB	857178..857786	Mycoplasma hyopneumoniae J	3563861
YP_279450.1	CDS	MHJ_0656	NC_007295.1	857925	859808	D	identified by sequence similarity; ORF located using Blastx; prolipoprotein p65	857925..859808	Mycoplasma hyopneumoniae J	3563504
YP_279451.1	CDS	MHJ_0657	NC_007295.1	860006	862945	D	identified by sequence similarity; ORF located using GeneMark; Blastx; COG1196; TC:1.C.57.1.1; ABC transporter ATP-binding protein P115-like	860006..862945	Mycoplasma hyopneumoniae J	3563347
YP_279452.1	CDS	rpmG	NC_007295.1	863067	863219	D	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33	863067..863219	Mycoplasma hyopneumoniae J	3563348
YP_279453.1	CDS	pepP	NC_007295.1	863221	864258	D	identified by sequence similarity; ORF located using Blastx; COG0006; XAA-Pro aminopeptidase	863221..864258	Mycoplasma hyopneumoniae J	3563349
YP_279454.1	CDS	MHJ_0660	NC_007295.1	864295	865998	D	hypothetical protein	864295..865998	Mycoplasma hyopneumoniae J	3563350
YP_279455.1	CDS	MHJ_0661	NC_007295.1	866056	867627	D	identified by sequence similarity; ORF located using Blastx; hypothetical protein	866056..867627	Mycoplasma hyopneumoniae J	3563351
YP_279456.1	CDS	MHJ_0662	NC_007295.1	868307	871843	R	hypothetical protein	complement(868307..871843)	Mycoplasma hyopneumoniae J	3563352
YP_279457.1	CDS	MHJ_0663	NC_007295.1	871941	875852	R	identified by sequence similarity; ORF located using Blastx; adhesin like-protein P146	complement(871941..875852)	Mycoplasma hyopneumoniae J	3563353
YP_279458.1	CDS	MHJ_0664	NC_007295.1	876401	877255	D	identified by sequence similarity; ORF located using Glimmer; Blastx; ABC transporter ATP-binding protein Pr1	876401..877255	Mycoplasma hyopneumoniae J	3563354
YP_279460.1	CDS	MHJ_0666	NC_007295.1	883176	883790	D	hypothetical protein	883176..883790	Mycoplasma hyopneumoniae J	3563356
YP_279461.1	CDS	greA	NC_007295.1	883831	884313	D	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA	883831..884313	Mycoplasma hyopneumoniae J	3563357
YP_279462.1	CDS	MHJ_0668	NC_007295.1	884382	885875	D	identified by sequence similarity; ORF located using Blastx; COG0534; TC:2.A.66.1.4; hypothetical protein	884382..885875	Mycoplasma hyopneumoniae J	3563358
YP_279463.1	CDS	MHJ_0669	NC_007295.1	885956	886921	D	in some Mycoplasma, this protein is fused to aspartyl/glutamyl-tRNA amidotransferase subunit C domain; hypothetical protein	885956..886921	Mycoplasma hyopneumoniae J	3563359
YP_279464.1	CDS	MHJ_0670	NC_007295.1	886934	888847	D	hypothetical protein	886934..888847	Mycoplasma hyopneumoniae J	3563360
YP_279465.1	CDS	valS	NC_007295.1	888858	891326	D	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase	888858..891326	Mycoplasma hyopneumoniae J	3563361
YP_279466.1	CDS	MHJ_0672	NC_007295.1	891333	892334	R	hypothetical protein	complement(891333..892334)	Mycoplasma hyopneumoniae J	3563362
YP_279467.1	CDS	MHJ_0673	NC_007295.1	892390	895008	R	hypothetical protein	complement(892390..895008)	Mycoplasma hyopneumoniae J	3563363
YP_279468.1	CDS	MHJ_0674	NC_007295.1	895087	896916	R	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC	complement(895087..896916)	Mycoplasma hyopneumoniae J	3563364
YP_279469.1	CDS	rnpA	NC_007295.1	896906	897244	R	identified by sequence similarity; ORF located using Blastx; COG0594; ribonuclease P protein component	complement(896906..897244)	Mycoplasma hyopneumoniae J	3563365
YP_279470.1	CDS	rpmH	NC_007295.1	897262	897405	R	in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34	complement(897262..897405)	Mycoplasma hyopneumoniae J	3563366
MHJ_0677	tRNA	MHJ_0677	NC_007295.1	103911	103986	R	tRNA-Phe	complement(103911..103986)	Mycoplasma hyopneumoniae J	3563367
MHJ_0678	tRNA	MHJ_0678	NC_007295.1	103988	104063	R	tRNA-Asp	complement(103988..104063)	Mycoplasma hyopneumoniae J	3563368
MHJ_0679	tRNA	MHJ_0679	NC_007295.1	104066	104140	R	tRNA-Met	complement(104066..104140)	Mycoplasma hyopneumoniae J	3563369
MHJ_0680	tRNA	MHJ_0680	NC_007295.1	104192	104282	R	tRNA-Ser	complement(104192..104282)	Mycoplasma hyopneumoniae J	3563370
MHJ_0681	tRNA	MHJ_0681	NC_007295.1	104287	104362	R	tRNA-Met	complement(104287..104362)	Mycoplasma hyopneumoniae J	3563371
MHJ_0682	tRNA	MHJ_0682	NC_007295.1	104418	104494	R	tRNA-Met	complement(104418..104494)	Mycoplasma hyopneumoniae J	3563372
MHJ_0683	tRNA	MHJ_0683	NC_007295.1	104499	104575	R	tRNA-Ala	complement(104499..104575)	Mycoplasma hyopneumoniae J	3563373
MHJ_0684	tRNA	MHJ_0684	NC_007295.1	104582	104658	R	tRNA-Pro	complement(104582..104658)	Mycoplasma hyopneumoniae J	3563374
MHJ_0685	tRNA	MHJ_0685	NC_007295.1	104740	104816	R	tRNA-Arg	complement(104740..104816)	Mycoplasma hyopneumoniae J	3563375
MHJ_0686	tRNA	MHJ_0686	NC_007295.1	119748	119821	D	tRNA-Trp	119748..119821	Mycoplasma hyopneumoniae J	3563376
MHJ_0687	tRNA	MHJ_0687	NC_007295.1	147056	147131	R	tRNA-Lys	complement(147056..147131)	Mycoplasma hyopneumoniae J	3563377
MHJ_0688	tRNA	MHJ_0688	NC_007295.1	147135	147220	R	tRNA-Leu	complement(147135..147220)	Mycoplasma hyopneumoniae J	3563752
MHJ_0689	tRNA	MHJ_0689	NC_007295.1	153303	153378	R	tRNA-His	complement(153303..153378)	Mycoplasma hyopneumoniae J	3563753
MHJ_0690	tRNA	MHJ_0690	NC_007295.1	170425	170508	R	tRNA-Leu	complement(170425..170508)	Mycoplasma hyopneumoniae J	3563754
MHJ_0691	tRNA	MHJ_0691	NC_007295.1	178384	178458	R	tRNA-Trp	complement(178384..178458)	Mycoplasma hyopneumoniae J	3563755
MHJ_0692	tRNA	MHJ_0692	NC_007295.1	321929	322003	D	tRNA-Asn	321929..322003	Mycoplasma hyopneumoniae J	3563756
MHJ_0693	tRNA	MHJ_0693	NC_007295.1	322007	322082	D	tRNA-Glu	322007..322082	Mycoplasma hyopneumoniae J	3563757
MHJ_0694	tRNA	MHJ_0694	NC_007295.1	322090	322165	D	tRNA-Val	322090..322165	Mycoplasma hyopneumoniae J	3563758
MHJ_0695	tRNA	MHJ_0695	NC_007295.1	322170	322246	D	tRNA-Thr	322170..322246	Mycoplasma hyopneumoniae J	3563853
MHJ_0696	tRNA	MHJ_0696	NC_007295.1	322282	322365	D	tRNA-Leu	322282..322365	Mycoplasma hyopneumoniae J	3563854
MHJ_0697	tRNA	MHJ_0697	NC_007295.1	416629	416705	R	tRNA-Arg	complement(416629..416705)	Mycoplasma hyopneumoniae J	3563855
MHJ_0698	tRNA	MHJ_0698	NC_007295.1	416715	416789	R	tRNA-Cys	complement(416715..416789)	Mycoplasma hyopneumoniae J	3563856
MHJ_0699	tRNA	MHJ_0699	NC_007295.1	471023	471097	R	tRNA-Gln	complement(471023..471097)	Mycoplasma hyopneumoniae J	3563857
MHJ_0700	tRNA	MHJ_0700	NC_007295.1	471102	471185	R	tRNA-Tyr	complement(471102..471185)	Mycoplasma hyopneumoniae J	3563858
MHJ_0701	tRNA	MHJ_0701	NC_007295.1	565222	565297	R	tRNA-Thr	complement(565222..565297)	Mycoplasma hyopneumoniae J	3563859
MHJ_0702	tRNA	MHJ_0702	NC_007295.1	579923	580007	R	tRNA-Leu	complement(579923..580007)	Mycoplasma hyopneumoniae J	3563860
MHJ_0703	tRNA	MHJ_0703	NC_007295.1	580013	580105	R	tRNA-Ser	complement(580013..580105)	Mycoplasma hyopneumoniae J	3563748
MHJ_0705	tRNA	MHJ_0705	NC_007295.1	792299	792372	D	tRNA-Gly	792299..792372	Mycoplasma hyopneumoniae J	3563750
MHJ_0706	tRNA	MHJ_0706	NC_007295.1	837781	837871	D	tRNA-Ser	837781..837871	Mycoplasma hyopneumoniae J	3563393
MHJ_0707	tRNA	MHJ_0707	NC_007295.1	852944	853020	R	tRNA-Ile	complement(852944..853020)	Mycoplasma hyopneumoniae J	3563394
MHJ_0704	rRNA	MHJ_0704	NC_007295.1	783228	783415	D	5S ribosomal RNA	783228..783415	Mycoplasma hyopneumoniae J	3563749
MHJ_0708	rRNA	MHJ_0708	NC_007295.1	877699	880600	R	23S ribosomal RNA	complement(877699..880600)	Mycoplasma hyopneumoniae J	3563395
MHJ_0709	rRNA	MHJ_0709	NC_007295.1	881092	882628	R	16S ribosomal RNA	complement(881092..882628)	Mycoplasma hyopneumoniae J	3563396