-- dump date 20140619_161532 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_757387.1 26553453 1040514 1..1359 1 NC_004432.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 1359 dnaA 1040514 dnaA Mycoplasma penetrans HF-2 chromosome replication initiator DnaA NP_757387.1 1 D 272633 CDS NP_757388.1 26553454 1040629 1450..2586 1 NC_004432.1 DNA polymerase III subunit beta 2586 1040629 MYPE20 Mycoplasma penetrans HF-2 DNA polymerase III subunit beta NP_757388.1 1450 D 272633 CDS NP_757389.1 26553455 1040630 3002..4951 1 NC_004432.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4951 gyrB 1040630 gyrB Mycoplasma penetrans HF-2 DNA gyrase subunit B NP_757389.1 3002 D 272633 CDS NP_757390.1 26553456 1040631 4970..7483 1 NC_004432.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 7483 1040631 MYPE40 Mycoplasma penetrans HF-2 DNA gyrase subunit A NP_757390.1 4970 D 272633 CDS NP_757391.1 26553457 1040632 8390..8995 1 NC_004432.1 truncated, C-terminal of MYPE9620; transposase 8995 1040632 MYPE50 Mycoplasma penetrans HF-2 transposase NP_757391.1 8390 D 272633 CDS NP_757392.1 26553458 1040634 9286..9654 1 NC_004432.1 truncated, N-terminal of MYPE9620; transposase 9654 1040634 MYPE60 Mycoplasma penetrans HF-2 transposase NP_757392.1 9286 D 272633 CDS NP_757393.1 26553459 1040635 9776..9961 1 NC_004432.1 truncated; transposase 9961 1040635 MYPE70 Mycoplasma penetrans HF-2 transposase NP_757393.1 9776 D 272633 CDS NP_757394.1 26553460 1040636 12011..12838 1 NC_004432.1 Soj protein 12838 1040636 MYPE80 Mycoplasma penetrans HF-2 Soj protein NP_757394.1 12011 D 272633 CDS NP_757395.1 26553461 1040637 12851..13678 1 NC_004432.1 hypothetical protein 13678 1040637 MYPE90 Mycoplasma penetrans HF-2 hypothetical protein NP_757395.1 12851 D 272633 CDS NP_757396.1 26553462 1040638 13682..14167 1 NC_004432.1 rRNA methylase 14167 1040638 MYPE100 Mycoplasma penetrans HF-2 rRNA methylase NP_757396.1 13682 D 272633 CDS NP_757397.1 26553463 1040639 complement(14264..14506) 1 NC_004432.1 MYPE120 paralog; hypothetical protein 14506 1040639 MYPE110 Mycoplasma penetrans HF-2 hypothetical protein NP_757397.1 14264 R 272633 CDS NP_757398.1 26553464 1040640 complement(14624..15082) 1 NC_004432.1 paralog family; hypothetical protein 15082 1040640 MYPE120 Mycoplasma penetrans HF-2 hypothetical protein NP_757398.1 14624 R 272633 CDS NP_757399.1 26553465 1040641 complement(15438..16343) 1 NC_004432.1 pseudouridine synthase 16343 1040641 MYPE130 Mycoplasma penetrans HF-2 pseudouridine synthase NP_757399.1 15438 R 272633 CDS NP_757400.1 26553466 1040642 16424..16906 1 NC_004432.1 peroxiredoxin 16906 1040642 MYPE140 Mycoplasma penetrans HF-2 peroxiredoxin NP_757400.1 16424 D 272633 CDS NP_757401.1 26553467 1040643 17109..18683 1 NC_004432.1 hypothetical protein 18683 1040643 MYPE150 Mycoplasma penetrans HF-2 hypothetical protein NP_757401.1 17109 D 272633 CDS NP_757402.1 26553468 1040644 18805..19704 1 NC_004432.1 UTP-glucose-1-phosphate uridylyltransferase 19704 1040644 MYPE160 Mycoplasma penetrans HF-2 UTP-glucose-1-phosphate uridylyltransferase NP_757402.1 18805 D 272633 CDS NP_757403.1 26553469 1040645 complement(19895..21451) 1 NC_004432.1 transposase 21451 1040645 MYPE170 Mycoplasma penetrans HF-2 transposase NP_757403.1 19895 R 272633 CDS NP_757404.1 26553470 1040646 21634..24378 1 NC_004432.1 hypothetical protein 24378 1040646 MYPE180 Mycoplasma penetrans HF-2 hypothetical protein NP_757404.1 21634 D 272633 CDS NP_757405.1 26553471 1040647 24393..28433 1 NC_004432.1 hypothetical protein 28433 1040647 MYPE190 Mycoplasma penetrans HF-2 hypothetical protein NP_757405.1 24393 D 272633 CDS NP_757406.1 26553472 1040648 28477..31512 1 NC_004432.1 phosphoglycerate mutase 31512 1040648 MYPE200 Mycoplasma penetrans HF-2 phosphoglycerate mutase NP_757406.1 28477 D 272633 CDS NP_757407.1 26553473 1040649 31521..32438 1 NC_004432.1 triose phosphate isomerase 32438 1040649 MYPE210 Mycoplasma penetrans HF-2 triose phosphate isomerase NP_757407.1 31521 D 272633 CDS NP_757408.1 26553474 1040650 32759..34078 1 NC_004432.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 34078 cysS 1040650 cysS Mycoplasma penetrans HF-2 cysteinyl-tRNA synthetase NP_757408.1 32759 D 272633 CDS NP_757409.1 26553475 1040651 34086..34802 1 NC_004432.1 rRNA methylase 34802 1040651 MYPE230 Mycoplasma penetrans HF-2 rRNA methylase NP_757409.1 34086 D 272633 CDS NP_757410.1 26553476 1040652 34793..35407 1 NC_004432.1 hypothetical protein 35407 1040652 MYPE240 Mycoplasma penetrans HF-2 hypothetical protein NP_757410.1 34793 D 272633 CDS NP_757411.1 26553477 1040653 35628..36095 1 NC_004432.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 36095 rplK 1040653 rplK Mycoplasma penetrans HF-2 50S ribosomal protein L11 NP_757411.1 35628 D 272633 CDS NP_757412.1 26553478 1040654 36106..37116 1 NC_004432.1 Binds directly to 23S rRNA and is located proximal to the site where elongation factor Tu is bound to the ribosome; 50S ribosomal protein L1 37116 1040654 MYPE260 Mycoplasma penetrans HF-2 50S ribosomal protein L1 NP_757412.1 36106 D 272633 CDS NP_757413.1 26553479 1040655 complement(37157..38092) 1 NC_004432.1 glycosyltransferase 38092 1040655 MYPE270 Mycoplasma penetrans HF-2 glycosyltransferase NP_757413.1 37157 R 272633 CDS NP_757414.1 26553480 1040656 complement(38104..38559) 1 NC_004432.1 hypothetical protein 38559 1040656 MYPE280 Mycoplasma penetrans HF-2 hypothetical protein NP_757414.1 38104 R 272633 CDS NP_757415.1 26553481 1040657 39162..39584 1 NC_004432.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 39584 rpsL 1040657 rpsL Mycoplasma penetrans HF-2 30S ribosomal protein S12 NP_757415.1 39162 D 272633 CDS NP_757416.1 26553482 1040658 39599..40066 1 NC_004432.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 40066 1040658 MYPE300 Mycoplasma penetrans HF-2 30S ribosomal protein S7 NP_757416.1 39599 D 272633 CDS NP_757417.1 26553483 1040659 40085..42133 1 NC_004432.1 elongation factor G 42133 1040659 MYPE310 Mycoplasma penetrans HF-2 elongation factor G NP_757417.1 40085 D 272633 CDS NP_757418.1 26553484 1040660 42293..43477 1 NC_004432.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 43477 tuf 1040660 tuf Mycoplasma penetrans HF-2 elongation factor Tu NP_757418.1 42293 D 272633 CDS NP_757419.1 26553485 1040661 43741..44757 1 NC_004432.1 hypothetical protein 44757 1040661 MYPE330 Mycoplasma penetrans HF-2 hypothetical protein NP_757419.1 43741 D 272633 CDS NP_757420.1 26553486 1040662 44860..45213 1 NC_004432.1 hypothetical protein 45213 1040662 MYPE340 Mycoplasma penetrans HF-2 hypothetical protein NP_757420.1 44860 D 272633 CDS NP_757421.1 26553487 1040663 45182..45544 1 NC_004432.1 holo-acyl carrier protein synthase 45544 1040663 MYPE350 Mycoplasma penetrans HF-2 holo-acyl carrier protein synthase NP_757421.1 45182 D 272633 CDS NP_757422.1 26553488 1040664 45685..45951 1 NC_004432.1 hypothetical protein 45951 1040664 MYPE360 Mycoplasma penetrans HF-2 hypothetical protein NP_757422.1 45685 D 272633 CDS NP_757423.1 26553489 1040665 46091..46903 1 NC_004432.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 46903 1040665 MYPE370 Mycoplasma penetrans HF-2 1-acyl-sn-glycerol-3-phosphate acyltransferase NP_757423.1 46091 D 272633 CDS NP_757424.1 26553490 1040666 46920..47795 1 NC_004432.1 hypothetical protein 47795 1040666 MYPE380 Mycoplasma penetrans HF-2 hypothetical protein NP_757424.1 46920 D 272633 CDS NP_757425.1 26553491 1040667 47785..48378 1 NC_004432.1 functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer; segregation and condensation protein B 48378 scpB 1040667 scpB Mycoplasma penetrans HF-2 segregation and condensation protein B NP_757425.1 47785 D 272633 CDS NP_757426.1 26553492 1040668 48388..48615 1 NC_004432.1 hypothetical protein 48615 1040668 MYPE400 Mycoplasma penetrans HF-2 hypothetical protein NP_757426.1 48388 D 272633 CDS NP_757427.1 26553493 1040669 48615..49175 1 NC_004432.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 49175 engB 1040669 engB Mycoplasma penetrans HF-2 ribosome biogenesis GTP-binding protein YsxC NP_757427.1 48615 D 272633 CDS NP_757428.1 26553494 1040670 49185..51803 1 NC_004432.1 valyl-tRNA synthetase 51803 1040670 MYPE420 Mycoplasma penetrans HF-2 valyl-tRNA synthetase NP_757428.1 49185 D 272633 CDS NP_757429.1 26553495 1040671 52584..53678 1 NC_004432.1 competence protein 53678 1040671 MYPE430 Mycoplasma penetrans HF-2 competence protein NP_757429.1 52584 D 272633 CDS NP_757430.1 26553496 1040672 53570..55570 1 NC_004432.1 hypothetical protein 55570 1040672 MYPE440 Mycoplasma penetrans HF-2 hypothetical protein NP_757430.1 53570 D 272633 CDS NP_757431.1 26553497 1040673 55583..56521 1 NC_004432.1 hypothetical protein 56521 1040673 MYPE450 Mycoplasma penetrans HF-2 hypothetical protein NP_757431.1 55583 D 272633 CDS NP_757432.1 26553498 1040674 56499..57842 1 NC_004432.1 integral membrane protein 57842 1040674 MYPE460 Mycoplasma penetrans HF-2 integral membrane protein NP_757432.1 56499 D 272633 CDS NP_757433.1 26553499 1040675 57935..58846 1 NC_004432.1 similar to cytadherence-accessory protein HMW1 homolog of Mycoplasma genitalium of MG313, F64234 Expect=2.5e-18, Identities=30%; integral membrane protein 58846 1040675 MYPE470 Mycoplasma penetrans HF-2 integral membrane protein NP_757433.1 57935 D 272633 CDS NP_757434.1 26553500 1040676 complement(58901..59137) 1 NC_004432.1 ribosomal protein S20 59137 1040676 MYPE480 Mycoplasma penetrans HF-2 ribosomal protein S20 NP_757434.1 58901 R 272633 CDS NP_757435.1 26553501 1040677 59212..60006 1 NC_004432.1 hypothetical protein 60006 1040677 MYPE490 Mycoplasma penetrans HF-2 hypothetical protein NP_757435.1 59212 D 272633 CDS NP_757436.1 26553502 1040678 59967..60923 1 NC_004432.1 methionyl-tRNA formyltransferase 60923 1040678 MYPE500 Mycoplasma penetrans HF-2 methionyl-tRNA formyltransferase NP_757436.1 59967 D 272633 CDS NP_757437.1 26553503 1040679 60933..62735 1 NC_004432.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 62735 1040679 MYPE510 Mycoplasma penetrans HF-2 GTP-binding protein LepA NP_757437.1 60933 D 272633 CDS NP_757438.1 26553504 1040680 62857..64464 1 NC_004432.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 64464 pyrG 1040680 pyrG Mycoplasma penetrans HF-2 CTP synthetase NP_757438.1 62857 D 272633 CDS NP_757439.1 26553505 1040681 64475..65299 1 NC_004432.1 GTPase 65299 1040681 MYPE530 Mycoplasma penetrans HF-2 GTPase NP_757439.1 64475 D 272633 CDS NP_757440.1 26553506 1040682 65383..65916 1 NC_004432.1 hypothetical protein 65916 1040682 MYPE540 Mycoplasma penetrans HF-2 hypothetical protein NP_757440.1 65383 D 272633 CDS NP_757441.1 26553507 1040683 66016..66447 1 NC_004432.1 hypothetical protein 66447 1040683 MYPE550 Mycoplasma penetrans HF-2 hypothetical protein NP_757441.1 66016 D 272633 CDS NP_757442.1 26553508 1040684 66469..67377 1 NC_004432.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 67377 1040684 MYPE560 Mycoplasma penetrans HF-2 ATP synthase F0F1 subunit A NP_757442.1 66469 D 272633 CDS NP_757443.1 26553509 1040685 67456..67692 1 NC_004432.1 ATP synthase subunit C 67692 1040685 MYPE570 Mycoplasma penetrans HF-2 ATP synthase subunit C NP_757443.1 67456 D 272633 CDS NP_757444.1 26553510 1040686 67714..68301 1 NC_004432.1 ATP synthase subunit B 68301 1040686 MYPE580 Mycoplasma penetrans HF-2 ATP synthase subunit B NP_757444.1 67714 D 272633 CDS NP_757445.1 26553511 1040687 68318..68884 1 NC_004432.1 ATP synthase subunit delta 68884 1040687 MYPE590 Mycoplasma penetrans HF-2 ATP synthase subunit delta NP_757445.1 68318 D 272633 CDS NP_757446.1 26553512 1040688 68887..70428 1 NC_004432.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 70428 1040688 MYPE600 Mycoplasma penetrans HF-2 ATP synthase F0F1 subunit alpha NP_757446.1 68887 D 272633 CDS NP_757447.1 26553513 1040689 70439..71299 1 NC_004432.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 71299 1040689 MYPE610 Mycoplasma penetrans HF-2 ATP synthase F0F1 subunit gamma NP_757447.1 70439 D 272633 CDS NP_757448.2 161723286 1040690 72168..73637 1 NC_004432.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 73637 1040690 MYPE620 Mycoplasma penetrans HF-2 ATP synthase F0F1 subunit beta NP_757448.2 72168 D 272633 CDS NP_757449.1 26553515 1040691 73649..74056 1 NC_004432.1 ATP synthase subunit epsilon 74056 1040691 MYPE630 Mycoplasma penetrans HF-2 ATP synthase subunit epsilon NP_757449.1 73649 D 272633 CDS NP_757450.2 161723285 1040692 74156..74443 1 NC_004432.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 74443 rpmE 1040692 rpmE Mycoplasma penetrans HF-2 50S ribosomal protein L31 NP_757450.2 74156 D 272633 CDS NP_757451.1 26553517 1040693 74531..75610 1 NC_004432.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 75610 prfA 1040693 prfA Mycoplasma penetrans HF-2 peptide chain release factor 1 NP_757451.1 74531 D 272633 CDS NP_757452.1 26553518 1040694 75576..76448 1 NC_004432.1 S-adenosylmethionine-dependent methyltransferase 76448 1040694 MYPE660 Mycoplasma penetrans HF-2 S-adenosylmethionine-dependent methyltransferase NP_757452.1 75576 D 272633 CDS NP_757453.1 26553519 1040695 76451..77092 1 NC_004432.1 Sua5/YciO/YrdC family protein; translation factor 77092 1040695 MYPE670 Mycoplasma penetrans HF-2 translation factor NP_757453.1 76451 D 272633 CDS NP_757454.1 26553520 1040696 77058..77534 1 NC_004432.1 ribose 5-phosphate and galactose-6-phosphate isomerase 77534 1040696 MYPE680 Mycoplasma penetrans HF-2 ribose 5-phosphate and galactose-6-phosphate isomerase NP_757454.1 77058 D 272633 CDS NP_757455.1 26553521 1040697 77536..78258 1 NC_004432.1 two-component response regulator 78258 1040697 MYPE690 Mycoplasma penetrans HF-2 two-component response regulator NP_757455.1 77536 D 272633 CDS NP_757456.1 26553522 1040698 78521..79102 1 NC_004432.1 predicted ThiJ family; intracellular protease 79102 1040698 MYPE700 Mycoplasma penetrans HF-2 intracellular protease NP_757456.1 78521 D 272633 CDS NP_757457.1 26553523 1040699 79238..80254 1 NC_004432.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 80254 hrcA 1040699 hrcA Mycoplasma penetrans HF-2 heat-inducible transcription repressor NP_757457.1 79238 D 272633 CDS NP_757458.1 26553524 1040700 80229..80774 1 NC_004432.1 hypothetical protein 80774 1040700 MYPE720 Mycoplasma penetrans HF-2 hypothetical protein NP_757458.1 80229 D 272633 CDS NP_757459.1 26553525 1040701 80780..82618 1 NC_004432.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 82618 1040701 MYPE730 Mycoplasma penetrans HF-2 1-deoxy-D-xylulose-5-phosphate synthase NP_757459.1 80780 D 272633 CDS NP_757460.1 26553526 1040702 82797..83687 1 NC_004432.1 hypothetical protein 83687 1040702 MYPE740 Mycoplasma penetrans HF-2 hypothetical protein NP_757460.1 82797 D 272633 CDS NP_757461.1 26553527 1040703 complement(83702..84031) 1 NC_004432.1 hypothetical protein 84031 1040703 MYPE750 Mycoplasma penetrans HF-2 hypothetical protein NP_757461.1 83702 R 272633 CDS NP_757462.1 26553528 1040704 84059..84310 1 NC_004432.1 nitrogen fixation protein 84310 1040704 MYPE760 Mycoplasma penetrans HF-2 nitrogen fixation protein NP_757462.1 84059 D 272633 CDS NP_757463.1 26553529 1040705 84320..86344 1 NC_004432.1 transketolase 86344 1040705 MYPE770 Mycoplasma penetrans HF-2 transketolase NP_757463.1 84320 D 272633 CDS NP_757464.1 26553530 1040706 86502..87998 1 NC_004432.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 87998 1040706 MYPE780 Mycoplasma penetrans HF-2 pyruvate kinase NP_757464.1 86502 D 272633 CDS NP_757465.1 26553531 1040707 88217..92344 1 NC_004432.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 92344 rpoB 1040707 rpoB Mycoplasma penetrans HF-2 DNA-directed RNA polymerase subunit beta NP_757465.1 88217 D 272633 CDS NP_757466.1 26553532 1040708 92365..96231 1 NC_004432.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 96231 1040708 MYPE800 Mycoplasma penetrans HF-2 DNA-directed RNA polymerase subunit beta' NP_757466.1 92365 D 272633 CDS NP_757467.1 26553533 1040709 96331..96771 1 NC_004432.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 96771 rplM 1040709 rplM Mycoplasma penetrans HF-2 50S ribosomal protein L13 NP_757467.1 96331 D 272633 CDS NP_757468.1 26553534 1040710 96789..97181 1 NC_004432.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 97181 rpsI 1040710 rpsI Mycoplasma penetrans HF-2 30S ribosomal protein S9 NP_757468.1 96789 D 272633 CDS NP_757469.1 26553535 1040711 97919..98137 1 NC_004432.1 hypothetical protein 98137 1040711 MYPE830 Mycoplasma penetrans HF-2 hypothetical protein NP_757469.1 97919 D 272633 CDS NP_757470.1 26553536 1040713 98295..98510 1 NC_004432.1 hypothetical protein 98510 1040713 MYPE835 Mycoplasma penetrans HF-2 hypothetical protein NP_757470.1 98295 D 272633 CDS NP_757471.1 26553537 1040714 98853..99674 1 NC_004432.1 haloacid dehalogenase 99674 1040714 MYPE840 Mycoplasma penetrans HF-2 haloacid dehalogenase NP_757471.1 98853 D 272633 CDS NP_757472.1 26553538 1040716 complement(100051..102228) 1 NC_004432.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 102228 1040716 MYPE850 Mycoplasma penetrans HF-2 ribonucleotide-diphosphate reductase subunit alpha NP_757472.1 100051 R 272633 CDS NP_757473.1 26553539 1040718 complement(102261..102710) 1 NC_004432.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 102710 nrdI 1040718 nrdI Mycoplasma penetrans HF-2 ribonucleotide reductase stimulatory protein NP_757473.1 102261 R 272633 CDS NP_757474.1 26553540 1040719 complement(102713..103732) 1 NC_004432.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 103732 nrdF 1040719 nrdF Mycoplasma penetrans HF-2 ribonucleotide-diphosphate reductase subunit beta NP_757474.1 102713 R 272633 CDS NP_757475.1 26553541 1040720 104027..109387 1 NC_004432.1 MYPE890 paralog; permease 109387 1040720 MYPE880 Mycoplasma penetrans HF-2 permease NP_757475.1 104027 D 272633 CDS NP_757476.1 26553542 1040721 109575..114956 1 NC_004432.1 paralog family; permease 114956 1040721 MYPE890 Mycoplasma penetrans HF-2 permease NP_757476.1 109575 D 272633 CDS NP_757477.1 26553543 1040722 complement(115033..116757) 1 NC_004432.1 hypothetical protein 116757 1040722 MYPE900 Mycoplasma penetrans HF-2 hypothetical protein NP_757477.1 115033 R 272633 CDS NP_757478.1 26553544 1040723 complement(116865..117722) 1 NC_004432.1 membrane integrated oxidoreductase 117722 1040723 MYPE910 Mycoplasma penetrans HF-2 membrane integrated oxidoreductase NP_757478.1 116865 R 272633 CDS NP_757479.1 26553545 1040724 complement(117724..118446) 1 NC_004432.1 hypothetical protein 118446 1040724 MYPE920 Mycoplasma penetrans HF-2 hypothetical protein NP_757479.1 117724 R 272633 CDS NP_757480.1 26553546 1040725 complement(118459..118875) 1 NC_004432.1 hypothetical protein 118875 1040725 MYPE930 Mycoplasma penetrans HF-2 hypothetical protein NP_757480.1 118459 R 272633 CDS NP_757481.1 26553547 1040726 119066..120202 1 NC_004432.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 120202 1040726 MYPE940 Mycoplasma penetrans HF-2 S-adenosylmethionine synthetase NP_757481.1 119066 D 272633 CDS NP_757482.1 26553548 1040727 complement(120286..120885) 1 NC_004432.1 paralog family; hypothetical protein 120885 1040727 MYPE950 Mycoplasma penetrans HF-2 hypothetical protein NP_757482.1 120286 R 272633 CDS NP_757483.1 26553549 1040728 complement(121160..122272) 1 NC_004432.1 paralog family; ABC transporter ATP-binding protein 122272 1040728 MYPE960 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757483.1 121160 R 272633 CDS NP_757484.1 26553550 1040729 complement(122274..124313) 1 NC_004432.1 hypothetical protein 124313 1040729 MYPE970 Mycoplasma penetrans HF-2 hypothetical protein NP_757484.1 122274 R 272633 CDS NP_757485.1 26553551 1040730 124534..124806 1 NC_004432.1 molecular chaperone GroES 124806 1040730 MYPE980 Mycoplasma penetrans HF-2 molecular chaperone GroES NP_757485.1 124534 D 272633 CDS NP_757486.1 26553552 1040731 124836..126473 1 NC_004432.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 126473 groEL 1040731 groEL Mycoplasma penetrans HF-2 molecular chaperone GroEL NP_757486.1 124836 D 272633 CDS NP_757487.1 26553553 1040732 complement(126533..127024) 1 NC_004432.1 deoxyuridine 5'triphosphate nucleotidohydrolase dUTPase 127024 1040732 MYPE1000 Mycoplasma penetrans HF-2 deoxyuridine 5'triphosphate nucleotidohydrolase dUTPase NP_757487.1 126533 R 272633 CDS NP_757488.1 26553554 1040733 127201..127599 1 NC_004432.1 ribosomal protein S16 127599 1040733 MYPE1010 Mycoplasma penetrans HF-2 ribosomal protein S16 NP_757488.1 127201 D 272633 CDS NP_757489.1 26553555 1040734 127608..128288 1 NC_004432.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 128288 trmD 1040734 trmD Mycoplasma penetrans HF-2 tRNA (guanine-N(1)-)-methyltransferase NP_757489.1 127608 D 272633 CDS NP_757490.1 26553556 1040735 128301..128738 1 NC_004432.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 128738 rplS 1040735 rplS Mycoplasma penetrans HF-2 50S ribosomal protein L19 NP_757490.1 128301 D 272633 CDS NP_757491.1 26553557 1040736 complement(128879..129049) 1 NC_004432.1 hypothetical protein 129049 1040736 MYPE1035 Mycoplasma penetrans HF-2 hypothetical protein NP_757491.1 128879 R 272633 CDS NP_757492.1 26553558 1040737 129290..130030 1 NC_004432.1 purine nucleoside phosphorylase 130030 1040737 MYPE1040 Mycoplasma penetrans HF-2 purine nucleoside phosphorylase NP_757492.1 129290 D 272633 CDS NP_757493.1 26553559 1040738 130032..131333 1 NC_004432.1 thymidine phosphorylase 131333 1040738 MYPE1050 Mycoplasma penetrans HF-2 thymidine phosphorylase NP_757493.1 130032 D 272633 CDS NP_757494.1 26553560 1040739 131342..131764 1 NC_004432.1 cytidine deaminase 131764 1040739 MYPE1060 Mycoplasma penetrans HF-2 cytidine deaminase NP_757494.1 131342 D 272633 CDS NP_757495.1 26553561 1040740 131768..133435 1 NC_004432.1 phosphomannomutase 133435 1040740 MYPE1070 Mycoplasma penetrans HF-2 phosphomannomutase NP_757495.1 131768 D 272633 CDS NP_757496.1 26553562 1040741 133662..136535 1 NC_004432.1 hypothetical protein 136535 1040741 MYPE1080 Mycoplasma penetrans HF-2 hypothetical protein NP_757496.1 133662 D 272633 CDS NP_757497.1 26553563 1040742 136647..138440 1 NC_004432.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 138440 nusA 1040742 nusA Mycoplasma penetrans HF-2 transcription elongation factor NusA NP_757497.1 136647 D 272633 CDS NP_757498.1 26553564 1040743 138433..138705 1 NC_004432.1 hypothetical protein 138705 1040743 MYPE1100 Mycoplasma penetrans HF-2 hypothetical protein NP_757498.1 138433 D 272633 CDS NP_757499.1 26553565 1040744 138728..140590 1 NC_004432.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 140590 infB 1040744 infB Mycoplasma penetrans HF-2 translation initiation factor IF-2 NP_757499.1 138728 D 272633 CDS NP_757500.1 26553566 1040745 140574..140924 1 NC_004432.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 140924 rbfA 1040745 rbfA Mycoplasma penetrans HF-2 ribosome-binding factor A NP_757500.1 140574 D 272633 CDS NP_757501.1 26553567 1040746 140930..141619 1 NC_004432.1 hypothetical protein 141619 1040746 MYPE1130 Mycoplasma penetrans HF-2 hypothetical protein NP_757501.1 140930 D 272633 CDS NP_757502.1 26553568 1040747 141878..142315 1 NC_004432.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 142315 rpsF 1040747 rpsF Mycoplasma penetrans HF-2 30S ribosomal protein S6 NP_757502.1 141878 D 272633 CDS NP_757503.1 26553569 1040748 142348..142917 1 NC_004432.1 single-strand DNA binding protein 142917 1040748 MYPE1150 Mycoplasma penetrans HF-2 single-strand DNA binding protein NP_757503.1 142348 D 272633 CDS NP_757504.1 26553570 1040749 142944..143408 1 NC_004432.1 ribosomal protein S18 143408 1040749 MYPE1160 Mycoplasma penetrans HF-2 ribosomal protein S18 NP_757504.1 142944 D 272633 CDS NP_757505.1 26553571 1040750 143508..144176 1 NC_004432.1 deoxyribose-phosphate aldolase 144176 1040750 MYPE1170 Mycoplasma penetrans HF-2 deoxyribose-phosphate aldolase NP_757505.1 143508 D 272633 CDS NP_757506.1 26553572 1040751 144185..144736 1 NC_004432.1 similar to hydrolase; hypothetical protein 144736 1040751 MYPE1180 Mycoplasma penetrans HF-2 hypothetical protein NP_757506.1 144185 D 272633 CDS NP_757507.1 26553573 1040752 145140..146075 1 NC_004432.1 endonuclease IV 146075 1040752 MYPE1190 Mycoplasma penetrans HF-2 endonuclease IV NP_757507.1 145140 D 272633 CDS NP_757508.1 26553574 1040753 146063..146497 1 NC_004432.1 ferric uptake regulation protein 146497 1040753 MYPE1200 Mycoplasma penetrans HF-2 ferric uptake regulation protein NP_757508.1 146063 D 272633 CDS NP_757509.1 26553575 1040755 146703..148094 1 NC_004432.1 integral membrane protein; transporter 148094 1040755 MYPE1210 Mycoplasma penetrans HF-2 transporter NP_757509.1 146703 D 272633 CDS NP_757510.1 26553576 1040756 148181..149716 1 NC_004432.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 149716 guaA 1040756 guaA Mycoplasma penetrans HF-2 GMP synthase NP_757510.1 148181 D 272633 CDS NP_757511.1 26553577 1040757 149987..151048 1 NC_004432.1 adenine-specific DNA methyltransferase 151048 1040757 MYPE1230 Mycoplasma penetrans HF-2 adenine-specific DNA methyltransferase NP_757511.1 149987 D 272633 CDS NP_757512.1 26553578 1040758 complement(151186..152202) 1 NC_004432.1 IS1630-like transposase 152202 1040758 MYPE1240 Mycoplasma penetrans HF-2 IS1630-like transposase NP_757512.1 151186 R 272633 CDS NP_757513.1 26553579 1040759 complement(152337..152765) 1 NC_004432.1 hypothetical protein 152765 1040759 MYPE1250 Mycoplasma penetrans HF-2 hypothetical protein NP_757513.1 152337 R 272633 CDS NP_757514.1 26553580 1040760 152798..154567 1 NC_004432.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 154567 uvrC 1040760 uvrC Mycoplasma penetrans HF-2 excinuclease ABC subunit C NP_757514.1 152798 D 272633 CDS NP_757515.1 26553581 1040762 complement(154628..155164) 1 NC_004432.1 exonuclease 155164 1040762 MYPE1270 Mycoplasma penetrans HF-2 exonuclease NP_757515.1 154628 R 272633 CDS NP_757516.1 26553582 1040763 155344..155856 1 NC_004432.1 phosphoesterase 155856 1040763 MYPE1280 Mycoplasma penetrans HF-2 phosphoesterase NP_757516.1 155344 D 272633 CDS NP_757517.1 26553583 1040764 complement(155840..156277) 1 NC_004432.1 ribosomal protein-alanine-acetyltransferase 156277 1040764 MYPE1290 Mycoplasma penetrans HF-2 ribosomal protein-alanine-acetyltransferase NP_757517.1 155840 R 272633 CDS NP_757518.1 26553584 1040765 complement(156252..156833) 1 NC_004432.1 hypothetical protein 156833 1040765 MYPE1300 Mycoplasma penetrans HF-2 hypothetical protein NP_757518.1 156252 R 272633 CDS NP_757519.1 26553585 1040766 complement(156823..157719) 1 NC_004432.1 pseudouridine synthase 157719 1040766 MYPE1310 Mycoplasma penetrans HF-2 pseudouridine synthase NP_757519.1 156823 R 272633 CDS NP_757520.1 26553586 1040767 complement(157729..158451) 1 NC_004432.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 158451 1040767 MYPE1320 Mycoplasma penetrans HF-2 lipoprotein signal peptidase NP_757520.1 157729 R 272633 CDS NP_757521.1 26553587 1040768 complement(158444..159343) 1 NC_004432.1 lytB protein 159343 1040768 MYPE1330 Mycoplasma penetrans HF-2 lytB protein NP_757521.1 158444 R 272633 CDS NP_757522.1 26553588 1040769 159648..162320 1 NC_004432.1 PTS system glucose-specific enzyme IIABC component 162320 1040769 MYPE1340 Mycoplasma penetrans HF-2 PTS system glucose-specific enzyme IIABC component NP_757522.1 159648 D 272633 CDS NP_757523.1 26553589 1040770 complement(162389..163444) 1 NC_004432.1 hypothetical protein 163444 1040770 MYPE1350 Mycoplasma penetrans HF-2 hypothetical protein NP_757523.1 162389 R 272633 CDS NP_757524.1 26553590 1040777 164410..165459 1 NC_004432.1 hypothetical protein 165459 1040777 MYPE1370 Mycoplasma penetrans HF-2 hypothetical protein NP_757524.1 164410 D 272633 CDS NP_757525.1 26553591 1040778 165706..167217 1 NC_004432.1 hypothetical protein 167217 1040778 MYPE1380 Mycoplasma penetrans HF-2 hypothetical protein NP_757525.1 165706 D 272633 CDS NP_757526.1 26553592 1040779 complement(167290..168258) 1 NC_004432.1 thioredoxin reductase 168258 1040779 MYPE1390 Mycoplasma penetrans HF-2 thioredoxin reductase NP_757526.1 167290 R 272633 CDS NP_757527.1 26553593 1040780 168317..169165 1 NC_004432.1 methyltransferase 169165 1040780 MYPE1400 Mycoplasma penetrans HF-2 methyltransferase NP_757527.1 168317 D 272633 CDS NP_757528.1 26553594 1040781 169188..169904 1 NC_004432.1 hypothetical protein 169904 1040781 MYPE1410 Mycoplasma penetrans HF-2 hypothetical protein NP_757528.1 169188 D 272633 CDS NP_757529.1 26553595 1040782 169907..171136 1 NC_004432.1 recombination factor protein RarA 171136 1040782 MYPE1420 Mycoplasma penetrans HF-2 recombination factor protein RarA NP_757529.1 169907 D 272633 CDS NP_757530.1 26553596 1040783 complement(171184..172335) 1 NC_004432.1 hypothetical protein 172335 1040783 MYPE1430 Mycoplasma penetrans HF-2 hypothetical protein NP_757530.1 171184 R 272633 CDS NP_757531.1 26553597 1040784 172475..172954 1 NC_004432.1 hypothetical protein 172954 1040784 MYPE1440 Mycoplasma penetrans HF-2 hypothetical protein NP_757531.1 172475 D 272633 CDS NP_757532.1 26553598 1040785 172947..173510 1 NC_004432.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 173510 1040785 MYPE1450 Mycoplasma penetrans HF-2 peptidyl-tRNA hydrolase NP_757532.1 172947 D 272633 CDS NP_757533.1 26553599 1040786 173513..174400 1 NC_004432.1 ATPase of the PP-loop superfamily; cell cycle protein MesJ 174400 1040786 MYPE1460 Mycoplasma penetrans HF-2 cell cycle protein MesJ NP_757533.1 173513 D 272633 CDS NP_757534.1 26553600 1040787 174394..175527 1 NC_004432.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 175527 1040787 MYPE1470 Mycoplasma penetrans HF-2 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP_757534.1 174394 D 272633 CDS NP_757535.1 26553601 1040788 175640..176620 1 NC_004432.1 catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 176620 1040788 MYPE1480 Mycoplasma penetrans HF-2 asparagine synthetase AsnA NP_757535.1 175640 D 272633 CDS NP_757536.1 26553602 1040789 complement(176640..177800) 1 NC_004432.1 DNA-damage repair protein MucB 177800 1040789 MYPE1490 Mycoplasma penetrans HF-2 DNA-damage repair protein MucB NP_757536.1 176640 R 272633 CDS NP_757537.1 26553603 1040790 complement(177790..178530) 1 NC_004432.1 hemolysin 178530 1040790 MYPE1500 Mycoplasma penetrans HF-2 hemolysin NP_757537.1 177790 R 272633 CDS NP_757538.1 26553604 1040791 complement(178626..179390) 1 NC_004432.1 hypothetical protein 179390 1040791 MYPE1510 Mycoplasma penetrans HF-2 hypothetical protein NP_757538.1 178626 R 272633 CDS NP_757539.1 26553605 1040792 179569..182907 1 NC_004432.1 coiled-coil structure containing protein 182907 1040792 MYPE1520 Mycoplasma penetrans HF-2 coiled-coil structure containing protein NP_757539.1 179569 D 272633 CDS NP_757540.1 26553606 1040793 182921..186076 1 NC_004432.1 coiled-coil structure containing protein; cytoskeletal protein 186076 1040793 MYPE1530 Mycoplasma penetrans HF-2 cytoskeletal protein NP_757540.1 182921 D 272633 CDS NP_757541.1 26553607 1040794 186078..188564 1 NC_004432.1 coiled-coil structure containing protein 188564 1040794 MYPE1540 Mycoplasma penetrans HF-2 coiled-coil structure containing protein NP_757541.1 186078 D 272633 CDS NP_757542.1 26553608 1040795 188576..198529 1 NC_004432.1 ortholog of cytoskeletal protein HMW2 of M. pneumoniae MPN310, NP_109998, (SwissProt HMW2_MYCPN), predicted coiled-coil structure containing protein; cytoskeletal protein 198529 1040795 MYPE1550 Mycoplasma penetrans HF-2 cytoskeletal protein NP_757542.1 188576 D 272633 CDS NP_757543.1 26553609 1040796 198554..201118 1 NC_004432.1 predicted coiled-coil structure containing protein; cytoskeletal protein 201118 1040796 MYPE1560 Mycoplasma penetrans HF-2 cytoskeletal protein NP_757543.1 198554 D 272633 CDS NP_757544.1 26553610 1040797 201148..203553 1 NC_004432.1 similar to cytoskeletal protein HMW2 homolog MG218 of M. genitalium U39701, Expect = 1.1e-20, Identities = 152/631 (24%), predicted coiled-coil structure containing protein; cytoskeletal protein 203553 1040797 MYPE1570 Mycoplasma penetrans HF-2 cytoskeletal protein NP_757544.1 201148 D 272633 CDS NP_757545.1 26553611 1040798 203735..204301 1 NC_004432.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 204301 1040798 MYPE1580 Mycoplasma penetrans HF-2 elongation factor P NP_757545.1 203735 D 272633 CDS NP_757546.1 26553612 1040799 204301..204585 1 NC_004432.1 hypothetical protein 204585 1040799 MYPE1590 Mycoplasma penetrans HF-2 hypothetical protein NP_757546.1 204301 D 272633 CDS NP_757547.1 26553613 1040800 204575..205024 1 NC_004432.1 transcription termination factor N-utilization substance protein B 205024 1040800 MYPE1600 Mycoplasma penetrans HF-2 transcription termination factor N-utilization substance protein B NP_757547.1 204575 D 272633 CDS NP_757548.1 26553614 1040801 205031..205735 1 NC_004432.1 hypothetical protein 205735 1040801 MYPE1610 Mycoplasma penetrans HF-2 hypothetical protein NP_757548.1 205031 D 272633 CDS NP_757549.1 26553615 1040802 205725..206276 1 NC_004432.1 hypothetical protein 206276 1040802 MYPE1620 Mycoplasma penetrans HF-2 hypothetical protein NP_757549.1 205725 D 272633 CDS NP_757550.1 26553616 1040803 206239..207567 1 NC_004432.1 hypothetical protein 207567 1040803 MYPE1630 Mycoplasma penetrans HF-2 hypothetical protein NP_757550.1 206239 D 272633 CDS NP_757551.1 26553617 1040804 207733..208101 1 NC_004432.1 hypothetical protein 208101 1040804 MYPE1640 Mycoplasma penetrans HF-2 hypothetical protein NP_757551.1 207733 D 272633 CDS NP_757552.1 26553618 1040805 complement(208269..208787) 1 NC_004432.1 hypothetical protein 208787 1040805 MYPE1650 Mycoplasma penetrans HF-2 hypothetical protein NP_757552.1 208269 R 272633 CDS NP_757553.1 26553619 1040806 208836..210209 1 NC_004432.1 hypothetical protein 210209 1040806 MYPE1660 Mycoplasma penetrans HF-2 hypothetical protein NP_757553.1 208836 D 272633 CDS NP_757554.1 26553620 1040807 210312..212162 1 NC_004432.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 212162 1040807 MYPE1670 Mycoplasma penetrans HF-2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA NP_757554.1 210312 D 272633 CDS NP_757555.1 26553621 1040808 212334..212834 1 NC_004432.1 hypothetical protein 212834 1040808 MYPE1680 Mycoplasma penetrans HF-2 hypothetical protein NP_757555.1 212334 D 272633 CDS NP_757556.1 26553622 1040809 213101..214465 1 NC_004432.1 NADH oxidase 214465 1040809 MYPE1690 Mycoplasma penetrans HF-2 NADH oxidase NP_757556.1 213101 D 272633 CDS NP_757557.1 26553623 1040810 214628..215215 1 NC_004432.1 acetyl transferase 215215 1040810 MYPE1700 Mycoplasma penetrans HF-2 acetyl transferase NP_757557.1 214628 D 272633 CDS NP_757558.1 26553624 1040811 215371..215691 1 NC_004432.1 thioredoxin 215691 1040811 MYPE1710 Mycoplasma penetrans HF-2 thioredoxin NP_757558.1 215371 D 272633 CDS NP_757559.1 26553625 1040812 215896..216741 1 NC_004432.1 RpiR family; transcriptional regulator 216741 1040812 MYPE1720 Mycoplasma penetrans HF-2 transcriptional regulator NP_757559.1 215896 D 272633 CDS NP_757560.1 26553626 1040813 216965..219310 1 NC_004432.1 PTS system glucose-specific IIABC component 219310 1040813 MYPE1730 Mycoplasma penetrans HF-2 PTS system glucose-specific IIABC component NP_757560.1 216965 D 272633 CDS NP_757561.1 26553627 1040814 219403..220095 1 NC_004432.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 220095 1040814 MYPE1740 Mycoplasma penetrans HF-2 N-acetylmannosamine-6-phosphate 2-epimerase NP_757561.1 219403 D 272633 CDS NP_757562.1 26553628 1040815 220295..221479 1 NC_004432.1 N-acetylglucosamine 6-P deacetylase 221479 1040815 MYPE1750 Mycoplasma penetrans HF-2 N-acetylglucosamine 6-P deacetylase NP_757562.1 220295 D 272633 CDS NP_757563.1 26553629 1040816 221487..222215 1 NC_004432.1 N-acetylglucosamine 6-phosphate isomerase 222215 1040816 MYPE1760 Mycoplasma penetrans HF-2 N-acetylglucosamine 6-phosphate isomerase NP_757563.1 221487 D 272633 CDS NP_757564.1 26553630 1040817 complement(222279..223340) 1 NC_004432.1 hypothetical protein 223340 1040817 MYPE1770 Mycoplasma penetrans HF-2 hypothetical protein NP_757564.1 222279 R 272633 CDS NP_757565.1 26553631 1040818 223836..224876 1 NC_004432.1 adenine-specific DNA methyltransferase 224876 1040818 MYPE1780 Mycoplasma penetrans HF-2 adenine-specific DNA methyltransferase NP_757565.1 223836 D 272633 CDS NP_757566.1 26553632 1040819 224839..225765 1 NC_004432.1 adenine-specific DNA methyltransferase 225765 1040819 MYPE1790 Mycoplasma penetrans HF-2 adenine-specific DNA methyltransferase NP_757566.1 224839 D 272633 CDS NP_757567.1 26553633 1040820 225777..227315 1 NC_004432.1 hypothetical protein 227315 1040820 MYPE1800 Mycoplasma penetrans HF-2 hypothetical protein NP_757567.1 225777 D 272633 CDS NP_757568.1 26553634 1040821 complement(227540..228442) 1 NC_004432.1 hypothetical protein 228442 1040821 MYPE1810 Mycoplasma penetrans HF-2 hypothetical protein NP_757568.1 227540 R 272633 CDS NP_757569.1 26553635 1040822 228709..229584 1 NC_004432.1 ABC transporter membrane protein 229584 1040822 MYPE1820 Mycoplasma penetrans HF-2 ABC transporter membrane protein NP_757569.1 228709 D 272633 CDS NP_757570.1 26553636 1040823 229692..231485 1 NC_004432.1 hypothetical protein 231485 1040823 MYPE1830 Mycoplasma penetrans HF-2 hypothetical protein NP_757570.1 229692 D 272633 CDS NP_757571.1 26553637 1040824 231463..233568 1 NC_004432.1 NAD-dependent DNA ligase 233568 1040824 MYPE1840 Mycoplasma penetrans HF-2 NAD-dependent DNA ligase NP_757571.1 231463 D 272633 CDS NP_757572.1 26553638 1040825 233602..234132 1 NC_004432.1 6-O-methylguanine-DNA methyltransferase 234132 1040825 MYPE1850 Mycoplasma penetrans HF-2 6-O-methylguanine-DNA methyltransferase NP_757572.1 233602 D 272633 CDS NP_757573.1 26553639 1040826 234225..234968 1 NC_004432.1 hypothetical protein 234968 1040826 MYPE1860 Mycoplasma penetrans HF-2 hypothetical protein NP_757573.1 234225 D 272633 CDS NP_757574.1 26553640 1040827 235617..236549 1 NC_004432.1 hypothetical protein 236549 1040827 MYPE1870 Mycoplasma penetrans HF-2 hypothetical protein NP_757574.1 235617 D 272633 CDS NP_757575.1 26553641 1040828 236559..237263 1 NC_004432.1 MYPE3080 paralog; ABC transporter ATP-binding protein 237263 1040828 MYPE1880 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757575.1 236559 D 272633 CDS NP_757576.1 26553642 1040829 237453..238091 1 NC_004432.1 catalyzes the hydrolytic cleavage of the 4'-phosphopantetheine residue from ACP; azoreductase 238091 acpD 1040829 acpD Mycoplasma penetrans HF-2 azoreductase NP_757576.1 237453 D 272633 CDS NP_757577.1 26553643 1040830 238182..238952 1 NC_004432.1 hypothetical protein 238952 1040830 MYPE1900 Mycoplasma penetrans HF-2 hypothetical protein NP_757577.1 238182 D 272633 CDS NP_757578.1 26553644 1040831 complement(238996..239478) 1 NC_004432.1 hypothetical protein 239478 1040831 MYPE1910 Mycoplasma penetrans HF-2 hypothetical protein NP_757578.1 238996 R 272633 CDS NP_757579.1 26553645 1040833 239545..240162 1 NC_004432.1 hypothetical protein 240162 1040833 MYPE1920 Mycoplasma penetrans HF-2 hypothetical protein NP_757579.1 239545 D 272633 CDS NP_757580.1 26553646 1040834 240192..241481 1 NC_004432.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 241481 obgE 1040834 obgE Mycoplasma penetrans HF-2 GTPase ObgE NP_757580.1 240192 D 272633 CDS NP_757581.1 26553647 1040835 241494..242225 1 NC_004432.1 NH(3)-dependent NAD+ synthetase 242225 1040835 MYPE1940 Mycoplasma penetrans HF-2 NH(3)-dependent NAD+ synthetase NP_757581.1 241494 D 272633 CDS NP_757582.1 26553648 1040836 242354..245491 1 NC_004432.1 low similarity to P1-like adhesin precursor of Mycoplasma pirum L19685 Expect=6.3e-03, Identities=19%; integral membrane protein 245491 1040836 MYPE1950 Mycoplasma penetrans HF-2 integral membrane protein NP_757582.1 242354 D 272633 CDS NP_757583.1 26553649 1040837 245654..248800 1 NC_004432.1 hypothetical protein 248800 1040837 MYPE1960 Mycoplasma penetrans HF-2 hypothetical protein NP_757583.1 245654 D 272633 CDS NP_757584.1 26553650 1040838 248978..249250 1 NC_004432.1 hypothetical protein 249250 1040838 MYPE1970 Mycoplasma penetrans HF-2 hypothetical protein NP_757584.1 248978 D 272633 CDS NP_757585.1 26553651 1040839 249228..252200 1 NC_004432.1 catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand; in the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE 252200 dnaE 1040839 dnaE Mycoplasma penetrans HF-2 DNA polymerase III DnaE NP_757585.1 249228 D 272633 CDS NP_757586.1 26553652 1040840 252208..253086 1 NC_004432.1 DNA polymerase I: 5'-3' exonuclease 253086 1040840 MYPE1990 Mycoplasma penetrans HF-2 DNA polymerase I: 5'-3' exonuclease NP_757586.1 252208 D 272633 CDS NP_757587.1 26553653 1040841 253088..253921 1 NC_004432.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 253921 1040841 MYPE2000 Mycoplasma penetrans HF-2 formamidopyrimidine-DNA glycosylase NP_757587.1 253088 D 272633 CDS NP_757588.1 26553654 1040842 253894..254514 1 NC_004432.1 hypothetical protein 254514 1040842 MYPE2010 Mycoplasma penetrans HF-2 hypothetical protein NP_757588.1 253894 D 272633 CDS NP_757589.1 26553655 1040843 254666..255922 1 NC_004432.1 hypothetical protein 255922 1040843 MYPE2020 Mycoplasma penetrans HF-2 hypothetical protein NP_757589.1 254666 D 272633 CDS NP_757590.1 26553656 1040844 255879..256910 1 NC_004432.1 primosome component 256910 1040844 MYPE2030 Mycoplasma penetrans HF-2 primosome component NP_757590.1 255879 D 272633 CDS NP_757591.1 26553657 1040845 257095..257730 1 NC_004432.1 hypothetical protein 257730 1040845 MYPE2040 Mycoplasma penetrans HF-2 hypothetical protein NP_757591.1 257095 D 272633 CDS NP_757592.1 26553658 1040846 257827..259260 1 NC_004432.1 replicative DNA helicase 259260 1040846 MYPE2050 Mycoplasma penetrans HF-2 replicative DNA helicase NP_757592.1 257827 D 272633 CDS NP_757593.1 26553659 1040847 259334..260545 1 NC_004432.1 hypothetical protein 260545 1040847 MYPE2060 Mycoplasma penetrans HF-2 hypothetical protein NP_757593.1 259334 D 272633 CDS NP_757594.1 26553660 1040848 260583..261323 1 NC_004432.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 261323 1040848 MYPE2070 Mycoplasma penetrans HF-2 uracil-DNA glycosylase NP_757594.1 260583 D 272633 CDS NP_757595.1 26553661 1040849 261398..262471 1 NC_004432.1 in some Mycoplasma, this protein is fused to aspartyl/glutamyl-tRNA amidotransferase subunit C domain; hypothetical protein 262471 1040849 MYPE2080 Mycoplasma penetrans HF-2 hypothetical protein NP_757595.1 261398 D 272633 CDS NP_757596.1 26553662 1040850 262493..262771 1 NC_004432.1 glutamyl-tRNA amidotransferase subunit C 262771 1040850 MYPE2090 Mycoplasma penetrans HF-2 glutamyl-tRNA amidotransferase subunit C NP_757596.1 262493 D 272633 CDS NP_757597.1 26553663 1040851 262774..264177 1 NC_004432.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 264177 gatA 1040851 gatA Mycoplasma penetrans HF-2 aspartyl/glutamyl-tRNA amidotransferase subunit A NP_757597.1 262774 D 272633 CDS NP_757598.1 26553664 1040852 264155..265600 1 NC_004432.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 265600 gatB 1040852 gatB Mycoplasma penetrans HF-2 aspartyl/glutamyl-tRNA amidotransferase subunit B NP_757598.1 264155 D 272633 CDS NP_757599.1 26553665 1040854 complement(265777..266370) 1 NC_004432.1 hypothetical protein 266370 1040854 MYPE2120 Mycoplasma penetrans HF-2 hypothetical protein NP_757599.1 265777 R 272633 CDS NP_757600.1 26553666 1040855 266507..269338 1 NC_004432.1 cation-transporting P-type ATPase 269338 1040855 MYPE2130 Mycoplasma penetrans HF-2 cation-transporting P-type ATPase NP_757600.1 266507 D 272633 CDS NP_757601.1 26553667 1040856 269437..270303 1 NC_004432.1 paralog family; hypothetical protein 270303 1040856 MYPE2140 Mycoplasma penetrans HF-2 hypothetical protein NP_757601.1 269437 D 272633 CDS NP_757602.1 26553668 1040857 270765..271658 1 NC_004432.1 MYPE2140 paralog; hypothetical protein 271658 1040857 MYPE2150 Mycoplasma penetrans HF-2 hypothetical protein NP_757602.1 270765 D 272633 CDS NP_757603.1 26553669 1040858 271714..272568 1 NC_004432.1 MYPE2140 paralog; hypothetical protein 272568 1040858 MYPE2160 Mycoplasma penetrans HF-2 hypothetical protein NP_757603.1 271714 D 272633 CDS NP_757604.1 26553670 1040859 complement(272771..273532) 1 NC_004432.1 insertion sequence IS232 ATP-binding protein 273532 1040859 MYPE2170 Mycoplasma penetrans HF-2 insertion sequence IS232 ATP-binding protein NP_757604.1 272771 R 272633 CDS NP_757605.1 26553671 1040860 complement(273534..274946) 1 NC_004432.1 transposase for IS232-like insertion sequence element 274946 1040860 MYPE2180 Mycoplasma penetrans HF-2 transposase for IS232-like insertion sequence element NP_757605.1 273534 R 272633 CDS NP_757606.1 26553672 1040861 275215..276354 1 NC_004432.1 hypothetical protein 276354 1040861 MYPE2190 Mycoplasma penetrans HF-2 hypothetical protein NP_757606.1 275215 D 272633 CDS NP_757607.1 26553673 1040862 complement(276441..278084) 1 NC_004432.1 ABC transporter ATP-binding protein 278084 1040862 MYPE2200 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757607.1 276441 R 272633 CDS NP_757608.1 26553674 1040863 complement(278077..279747) 1 NC_004432.1 ABC transporter ATP-binding protein 279747 1040863 MYPE2210 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757608.1 278077 R 272633 CDS NP_757609.1 26553675 1040864 280126..282345 1 NC_004432.1 hypothetical protein 282345 1040864 MYPE2220 Mycoplasma penetrans HF-2 hypothetical protein NP_757609.1 280126 D 272633 CDS NP_757610.1 26553676 1040865 282399..282794 1 NC_004432.1 hypothetical protein 282794 1040865 MYPE2230 Mycoplasma penetrans HF-2 hypothetical protein NP_757610.1 282399 D 272633 CDS NP_757611.1 26553677 1040866 complement(282801..283628) 1 NC_004432.1 hypothetical protein 283628 1040866 MYPE2240 Mycoplasma penetrans HF-2 hypothetical protein NP_757611.1 282801 R 272633 CDS NP_757612.1 26553678 1040867 complement(283769..285043) 1 NC_004432.1 MYPE4220 paralog; hypothetical protein 285043 1040867 MYPE2250 Mycoplasma penetrans HF-2 hypothetical protein NP_757612.1 283769 R 272633 CDS NP_757613.1 26553679 1040868 285410..285835 1 NC_004432.1 hypothetical protein 285835 1040868 MYPE2260 Mycoplasma penetrans HF-2 hypothetical protein NP_757613.1 285410 D 272633 CDS NP_757614.1 26553680 1040869 285919..286368 1 NC_004432.1 hypothetical protein 286368 1040869 MYPE2270 Mycoplasma penetrans HF-2 hypothetical protein NP_757614.1 285919 D 272633 CDS NP_757615.1 26553681 1040870 286413..287063 1 NC_004432.1 cytidylate kinase 287063 1040870 MYPE2280 Mycoplasma penetrans HF-2 cytidylate kinase NP_757615.1 286413 D 272633 CDS NP_757616.1 26553682 1040871 287066..288400 1 NC_004432.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 288400 engA 1040871 engA Mycoplasma penetrans HF-2 GTP-binding protein EngA NP_757616.1 287066 D 272633 CDS NP_757617.1 26553683 1040872 288390..289406 1 NC_004432.1 NAD-dependent glycerol-3-phosphate dehydrogenase 289406 1040872 MYPE2300 Mycoplasma penetrans HF-2 NAD-dependent glycerol-3-phosphate dehydrogenase NP_757617.1 288390 D 272633 CDS NP_757618.1 26553684 1040873 complement(289619..291175) 1 NC_004432.1 IS1202-like transposase 291175 1040873 MYPE2310 Mycoplasma penetrans HF-2 IS1202-like transposase NP_757618.1 289619 R 272633 CDS NP_757619.1 26553685 1040876 complement(291534..292382) 1 NC_004432.1 hypothetical protein 292382 1040876 MYPE2330 Mycoplasma penetrans HF-2 hypothetical protein NP_757619.1 291534 R 272633 CDS NP_757620.1 26553686 1040877 292522..294078 1 NC_004432.1 transposase 294078 1040877 MYPE2340 Mycoplasma penetrans HF-2 transposase NP_757620.1 292522 D 272633 CDS NP_757621.1 26553687 1040878 294686..295222 1 NC_004432.1 MYPE2360 paralog; hypothetical protein 295222 1040878 MYPE2350 Mycoplasma penetrans HF-2 hypothetical protein NP_757621.1 294686 D 272633 CDS NP_757622.1 26553688 1040879 295417..296025 1 NC_004432.1 low similarity to histidine kinase, paralog family; hypothetical protein 296025 1040879 MYPE2360 Mycoplasma penetrans HF-2 hypothetical protein NP_757622.1 295417 D 272633 CDS NP_757623.1 26553689 1040880 296149..296739 1 NC_004432.1 MYPE2360 paralog; hypothetical protein 296739 1040880 MYPE2370 Mycoplasma penetrans HF-2 hypothetical protein NP_757623.1 296149 D 272633 CDS NP_757624.1 26553690 1040881 296876..297484 1 NC_004432.1 MYPE2360 paralog; hypothetical protein 297484 1040881 MYPE2380 Mycoplasma penetrans HF-2 hypothetical protein NP_757624.1 296876 D 272633 CDS NP_757625.1 26553691 1040882 297729..298106 1 NC_004432.1 hypothetical protein 298106 1040882 MYPE2390 Mycoplasma penetrans HF-2 hypothetical protein NP_757625.1 297729 D 272633 CDS NP_757626.1 26553692 1040883 298054..298515 1 NC_004432.1 MYPE2360 paralog; hypothetical protein 298515 1040883 MYPE2400 Mycoplasma penetrans HF-2 hypothetical protein NP_757626.1 298054 D 272633 CDS NP_757627.1 26553693 1040884 298660..299196 1 NC_004432.1 MYPE2360 paralog; hypothetical protein 299196 1040884 MYPE2410 Mycoplasma penetrans HF-2 hypothetical protein NP_757627.1 298660 D 272633 CDS NP_757628.1 26553694 1040885 299403..300095 1 NC_004432.1 hypothetical protein 300095 1040885 MYPE2420 Mycoplasma penetrans HF-2 hypothetical protein NP_757628.1 299403 D 272633 CDS NP_757629.1 26553695 1040886 300102..301055 1 NC_004432.1 hypothetical protein 301055 1040886 MYPE2430 Mycoplasma penetrans HF-2 hypothetical protein NP_757629.1 300102 D 272633 CDS NP_757630.1 26553696 1040887 301605..302633 1 NC_004432.1 hypothetical protein 302633 1040887 MYPE2440 Mycoplasma penetrans HF-2 hypothetical protein NP_757630.1 301605 D 272633 CDS NP_757631.1 26553697 1040888 302904..303320 1 NC_004432.1 hypothetical protein 303320 1040888 MYPE2450 Mycoplasma penetrans HF-2 hypothetical protein NP_757631.1 302904 D 272633 CDS NP_757632.1 26553698 1040889 303446..303979 1 NC_004432.1 recombination protein U 303979 1040889 MYPE2460 Mycoplasma penetrans HF-2 recombination protein U NP_757632.1 303446 D 272633 CDS NP_757633.1 26553699 1040890 304156..305961 1 NC_004432.1 paralog family; ABC transporter ATP-binding protein 305961 1040890 MYPE2470 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757633.1 304156 D 272633 CDS NP_757634.1 26553700 1040891 305942..307879 1 NC_004432.1 ABC transporter ATP-binding protein 307879 1040891 MYPE2480 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757634.1 305942 D 272633 CDS NP_757635.1 26553701 1040892 complement(308014..308379) 1 NC_004432.1 DNA-binding histone-like protein HU-alpha 308379 1040892 MYPE2490 Mycoplasma penetrans HF-2 DNA-binding histone-like protein HU-alpha NP_757635.1 308014 R 272633 CDS NP_757636.1 26553702 1040893 308660..311680 1 NC_004432.1 hypothetical protein 311680 1040893 MYPE2500 Mycoplasma penetrans HF-2 hypothetical protein NP_757636.1 308660 D 272633 CDS NP_757637.1 26553703 1040894 311855..313894 1 NC_004432.1 hypothetical protein 313894 1040894 MYPE2510 Mycoplasma penetrans HF-2 hypothetical protein NP_757637.1 311855 D 272633 CDS NP_757638.1 26553704 1040895 313900..315948 1 NC_004432.1 hypothetical protein 315948 1040895 MYPE2520 Mycoplasma penetrans HF-2 hypothetical protein NP_757638.1 313900 D 272633 CDS NP_757639.1 26553705 1040896 316009..317346 1 NC_004432.1 signal recognition particle GTPase 317346 1040896 MYPE2530 Mycoplasma penetrans HF-2 signal recognition particle GTPase NP_757639.1 316009 D 272633 CDS NP_757640.1 26553706 1040897 317424..318161 1 NC_004432.1 Zn-dependent protease 318161 1040897 MYPE2540 Mycoplasma penetrans HF-2 Zn-dependent protease NP_757640.1 317424 D 272633 CDS NP_757641.1 26553707 1040898 318184..318369 1 NC_004432.1 MYPE2560 paralog, partial; hypothetical protein 318369 1040898 MYPE2545 Mycoplasma penetrans HF-2 hypothetical protein NP_757641.1 318184 D 272633 CDS NP_757642.1 26553708 1040899 318571..321945 1 NC_004432.1 MYPE2560 paralog, partial; hypothetical protein 321945 1040899 MYPE2550 Mycoplasma penetrans HF-2 hypothetical protein NP_757642.1 318571 D 272633 CDS NP_757643.1 26553709 1040900 322127..325501 1 NC_004432.1 paralog family; hypothetical protein 325501 1040900 MYPE2560 Mycoplasma penetrans HF-2 hypothetical protein NP_757643.1 322127 D 272633 CDS NP_757644.1 26553710 1040901 complement(325592..326920) 1 NC_004432.1 hypothetical protein 326920 1040901 MYPE2570 Mycoplasma penetrans HF-2 hypothetical protein NP_757644.1 325592 R 272633 CDS NP_757645.1 26553711 1040902 327218..330610 1 NC_004432.1 MYPE2560 paralog; hypothetical protein 330610 1040902 MYPE2580 Mycoplasma penetrans HF-2 hypothetical protein NP_757645.1 327218 D 272633 CDS NP_757646.1 26553712 1040903 complement(330665..331237) 1 NC_004432.1 acetyltransferase 331237 1040903 MYPE2590 Mycoplasma penetrans HF-2 acetyltransferase NP_757646.1 330665 R 272633 CDS NP_757647.1 26553713 1040904 complement(331244..331825) 1 NC_004432.1 acetyltransferase 331825 1040904 MYPE2600 Mycoplasma penetrans HF-2 acetyltransferase NP_757647.1 331244 R 272633 CDS NP_757648.1 26553714 1040905 332074..335460 1 NC_004432.1 MYPE2560 paralog; hypothetical protein 335460 1040905 MYPE2610 Mycoplasma penetrans HF-2 hypothetical protein NP_757648.1 332074 D 272633 CDS NP_757649.1 26553715 1040906 335914..337473 1 NC_004432.1 P35 lipoprotein 337473 1040906 MYPE2620 Mycoplasma penetrans HF-2 P35 lipoprotein NP_757649.1 335914 D 272633 CDS NP_757650.1 26553716 1040907 337750..339306 1 NC_004432.1 P35 lipoprotein 339306 1040907 MYPE2630 Mycoplasma penetrans HF-2 P35 lipoprotein NP_757650.1 337750 D 272633 CDS NP_757651.1 26553717 1040908 339473..340699 1 NC_004432.1 permease 340699 1040908 MYPE2640 Mycoplasma penetrans HF-2 permease NP_757651.1 339473 D 272633 CDS NP_757652.1 26553718 1040910 340722..341705 1 NC_004432.1 Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase 341705 1040910 MYPE2650 Mycoplasma penetrans HF-2 D-lactate dehydrogenase NP_757652.1 340722 D 272633 CDS NP_757653.1 26553719 1040911 341814..345266 1 NC_004432.1 MYPE2560 paralog; hypothetical protein 345266 1040911 MYPE2660 Mycoplasma penetrans HF-2 hypothetical protein NP_757653.1 341814 D 272633 CDS NP_757654.1 26553720 1040912 345473..348841 1 NC_004432.1 MYPE2560 paralog; hypothetical protein 348841 1040912 MYPE2670 Mycoplasma penetrans HF-2 hypothetical protein NP_757654.1 345473 D 272633 CDS NP_757655.1 26553721 1040913 348982..352377 1 NC_004432.1 MYPE2560 paralog; hypothetical protein 352377 1040913 MYPE2680 Mycoplasma penetrans HF-2 hypothetical protein NP_757655.1 348982 D 272633 CDS NP_757656.1 26553722 1040914 352719..353825 1 NC_004432.1 P35 lipoprotein 353825 1040914 MYPE2690 Mycoplasma penetrans HF-2 P35 lipoprotein NP_757656.1 352719 D 272633 CDS NP_757657.1 26553723 1040915 354128..355279 1 NC_004432.1 P35 lipoprotein 355279 1040915 MYPE2700 Mycoplasma penetrans HF-2 P35 lipoprotein NP_757657.1 354128 D 272633 CDS NP_757658.1 26553724 1040916 355503..358874 1 NC_004432.1 hypothetical protein 358874 1040916 MYPE2710 Mycoplasma penetrans HF-2 hypothetical protein NP_757658.1 355503 D 272633 CDS NP_757659.1 26553725 1040917 359115..359294 1 NC_004432.1 hypothetical protein 359294 1040917 MYPE2715 Mycoplasma penetrans HF-2 hypothetical protein NP_757659.1 359115 D 272633 CDS NP_757660.1 26553726 1040918 359352..359810 1 NC_004432.1 hypothetical protein 359810 1040918 MYPE2720 Mycoplasma penetrans HF-2 hypothetical protein NP_757660.1 359352 D 272633 CDS NP_757661.1 26553727 1040920 complement(359871..361202) 1 NC_004432.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 361202 glyA 1040920 glyA Mycoplasma penetrans HF-2 serine hydroxymethyltransferase NP_757661.1 359871 R 272633 CDS NP_757662.1 26553728 1040921 complement(361235..362935) 1 NC_004432.1 threonyl-tRNA synthetase 362935 1040921 MYPE2740 Mycoplasma penetrans HF-2 threonyl-tRNA synthetase NP_757662.1 361235 R 272633 CDS NP_757663.1 26553729 1040922 363053..363943 1 NC_004432.1 hypothetical protein 363943 1040922 MYPE2750 Mycoplasma penetrans HF-2 hypothetical protein NP_757663.1 363053 D 272633 CDS NP_757664.1 26553730 1040923 363963..364634 1 NC_004432.1 hypothetical protein 364634 1040923 MYPE2760 Mycoplasma penetrans HF-2 hypothetical protein NP_757664.1 363963 D 272633 CDS NP_757665.1 26553731 1040924 364650..365372 1 NC_004432.1 cytidine diphosphocholine pyrophosphorylase 365372 1040924 MYPE2770 Mycoplasma penetrans HF-2 cytidine diphosphocholine pyrophosphorylase NP_757665.1 364650 D 272633 CDS NP_757666.1 26553732 1040925 complement(365412..366380) 1 NC_004432.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 366380 ruvB 1040925 ruvB Mycoplasma penetrans HF-2 Holliday junction DNA helicase RuvB NP_757666.1 365412 R 272633 CDS NP_757667.1 26553733 1040926 complement(366346..367005) 1 NC_004432.1 holliday junction DNA helicase 367005 1040926 MYPE2790 Mycoplasma penetrans HF-2 holliday junction DNA helicase NP_757667.1 366346 R 272633 CDS NP_757668.1 26553734 1040927 complement(367157..367420) 1 NC_004432.1 phosphocarrier HPr protein 367420 1040927 MYPE2800 Mycoplasma penetrans HF-2 phosphocarrier HPr protein NP_757668.1 367157 R 272633 CDS NP_757669.1 26553735 1040928 complement(367537..369093) 1 NC_004432.1 cardiolipin synthase 369093 1040928 MYPE2810 Mycoplasma penetrans HF-2 cardiolipin synthase NP_757669.1 367537 R 272633 CDS NP_757670.1 26553736 1040929 369209..371023 1 NC_004432.1 oligoendopeptidase F 371023 1040929 MYPE2820 Mycoplasma penetrans HF-2 oligoendopeptidase F NP_757670.1 369209 D 272633 CDS NP_757671.1 26553737 1040930 371025..371807 1 NC_004432.1 hypothetical protein 371807 1040930 MYPE2830 Mycoplasma penetrans HF-2 hypothetical protein NP_757671.1 371025 D 272633 CDS NP_757672.1 26553738 1040931 complement(371804..373588) 1 NC_004432.1 hypothetical protein 373588 1040931 MYPE2840 Mycoplasma penetrans HF-2 hypothetical protein NP_757672.1 371804 R 272633 CDS NP_757673.1 26553739 1040932 373629..373850 1 NC_004432.1 hypothetical protein 373850 1040932 MYPE2850 Mycoplasma penetrans HF-2 hypothetical protein NP_757673.1 373629 D 272633 CDS NP_757674.1 26553740 1040933 374053..375333 1 NC_004432.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 375333 hisS 1040933 hisS Mycoplasma penetrans HF-2 histidyl-tRNA synthetase NP_757674.1 374053 D 272633 CDS NP_757675.1 26553741 1040934 375348..377090 1 NC_004432.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 377090 aspS 1040934 aspS Mycoplasma penetrans HF-2 aspartyl-tRNA synthetase NP_757675.1 375348 D 272633 CDS NP_757676.1 26553742 1040935 377096..377758 1 NC_004432.1 S-adenosylmethionine-dependent methyltransferase 377758 1040935 MYPE2880 Mycoplasma penetrans HF-2 S-adenosylmethionine-dependent methyltransferase NP_757676.1 377096 D 272633 CDS NP_757677.1 26553743 1040936 377857..379401 1 NC_004432.1 hypothetical protein 379401 1040936 MYPE2890 Mycoplasma penetrans HF-2 hypothetical protein NP_757677.1 377857 D 272633 CDS NP_757678.1 26553744 1040937 379569..380330 1 NC_004432.1 phage integrase family; recombinase 380330 1040937 MYPE2900 Mycoplasma penetrans HF-2 recombinase NP_757678.1 379569 D 272633 CDS NP_757679.1 26553745 1040938 380395..381024 1 NC_004432.1 hypothetical protein 381024 1040938 MYPE2910 Mycoplasma penetrans HF-2 hypothetical protein NP_757679.1 380395 D 272633 CDS NP_757680.1 26553746 1040939 complement(381103..383154) 1 NC_004432.1 hypothetical protein 383154 1040939 MYPE2920 Mycoplasma penetrans HF-2 hypothetical protein NP_757680.1 381103 R 272633 CDS NP_757681.1 26553747 1040940 383474..384013 1 NC_004432.1 ferritin 384013 1040940 MYPE2930 Mycoplasma penetrans HF-2 ferritin NP_757681.1 383474 D 272633 CDS NP_757682.1 26553748 1040941 384145..384324 1 NC_004432.1 similar to beta-glycosidase lacS of Sulfolobus solfataricus AE006893 Expect=7.5e-01, Identities=35%; hypothetical protein 384324 1040941 MYPE2940 Mycoplasma penetrans HF-2 hypothetical protein NP_757682.1 384145 D 272633 CDS NP_757683.1 26553749 1040942 384825..385379 1 NC_004432.1 NADPH-dependent reductase 385379 1040942 MYPE2950 Mycoplasma penetrans HF-2 NADPH-dependent reductase NP_757683.1 384825 D 272633 CDS NP_757684.1 26553750 1040943 385404..385913 1 NC_004432.1 MarR family transcriptional regulator 385913 1040943 MYPE2960 Mycoplasma penetrans HF-2 MarR family transcriptional regulator NP_757684.1 385404 D 272633 CDS NP_757685.1 26553751 1040944 complement(385989..386561) 1 NC_004432.1 MutT-like hydrolase 386561 1040944 MYPE2970 Mycoplasma penetrans HF-2 MutT-like hydrolase NP_757685.1 385989 R 272633 CDS NP_757686.1 26553752 1040945 386784..387416 1 NC_004432.1 hypothetical protein 387416 1040945 MYPE2980 Mycoplasma penetrans HF-2 hypothetical protein NP_757686.1 386784 D 272633 CDS NP_757687.1 26553753 1040946 387437..388342 1 NC_004432.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 388342 1040946 MYPE2990 Mycoplasma penetrans HF-2 HPr kinase/phosphorylase NP_757687.1 387437 D 272633 CDS NP_757688.1 26553754 1040947 388329..389399 1 NC_004432.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 389399 1040947 MYPE3000 Mycoplasma penetrans HF-2 prolipoprotein diacylglyceryl transferase NP_757688.1 388329 D 272633 CDS NP_757689.1 26553755 1040948 complement(389456..390160) 1 NC_004432.1 potassium uptake protein KtrA 390160 1040948 MYPE3010 Mycoplasma penetrans HF-2 potassium uptake protein KtrA NP_757689.1 389456 R 272633 CDS NP_757690.1 26553756 1040949 390365..392245 1 NC_004432.1 integral membrane protein 392245 1040949 MYPE3020 Mycoplasma penetrans HF-2 integral membrane protein NP_757690.1 390365 D 272633 CDS NP_757691.1 26553757 1040950 392248..394284 1 NC_004432.1 ABC transporter ATP-binding protein 394284 1040950 MYPE3030 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757691.1 392248 D 272633 CDS NP_757692.1 26553758 1040951 394387..395235 1 NC_004432.1 hypothetical protein 395235 1040951 MYPE3040 Mycoplasma penetrans HF-2 hypothetical protein NP_757692.1 394387 D 272633 CDS NP_757693.1 26553759 1040952 complement(395232..395882) 1 NC_004432.1 d-ribulose-5-phosphate 3 epimerase 395882 1040952 MYPE3050 Mycoplasma penetrans HF-2 d-ribulose-5-phosphate 3 epimerase NP_757693.1 395232 R 272633 CDS NP_757694.1 26553760 1040953 395995..397560 1 NC_004432.1 hypothetical protein 397560 1040953 MYPE3060 Mycoplasma penetrans HF-2 hypothetical protein NP_757694.1 395995 D 272633 CDS NP_757695.1 26553761 1040954 397613..398605 1 NC_004432.1 integral membrane protein 398605 1040954 MYPE3070 Mycoplasma penetrans HF-2 integral membrane protein NP_757695.1 397613 D 272633 CDS NP_757696.1 26553762 1040955 398544..399470 1 NC_004432.1 paralog family; ABC transporter ATP-binding protein 399470 1040955 MYPE3080 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757696.1 398544 D 272633 CDS NP_757697.1 26553763 1040956 399578..401251 1 NC_004432.1 hypothetical protein 401251 1040956 MYPE3090 Mycoplasma penetrans HF-2 hypothetical protein NP_757697.1 399578 D 272633 CDS NP_757698.1 26553764 1040957 401408..402544 1 NC_004432.1 hypothetical protein 402544 1040957 MYPE3100 Mycoplasma penetrans HF-2 hypothetical protein NP_757698.1 401408 D 272633 CDS NP_757699.1 26553765 1040958 complement(403080..403709) 1 NC_004432.1 ortholog of YwnB of Bacillus subtilis; hypothetical protein 403709 1040958 MYPE3110 Mycoplasma penetrans HF-2 hypothetical protein NP_757699.1 403080 R 272633 CDS NP_757700.1 26553766 1040959 complement(403859..404290) 1 NC_004432.1 ortholog of YwnA of Bacillus subtilis; hypothetical protein 404290 1040959 MYPE3120 Mycoplasma penetrans HF-2 hypothetical protein NP_757700.1 403859 R 272633 CDS NP_757701.1 26553767 1040961 404776..405624 1 NC_004432.1 choline kinase 405624 1040961 MYPE3130 Mycoplasma penetrans HF-2 choline kinase NP_757701.1 404776 D 272633 CDS NP_757702.1 26553768 1040962 406653..410201 1 NC_004432.1 MYPE2560 paralog; hypothetical protein 410201 1040962 MYPE3140 Mycoplasma penetrans HF-2 hypothetical protein NP_757702.1 406653 D 272633 CDS NP_757703.1 26553769 1040963 410394..411845 1 NC_004432.1 inosine-5'-monophosphate dehydrogenase 411845 1040963 MYPE3150 Mycoplasma penetrans HF-2 inosine-5'-monophosphate dehydrogenase NP_757703.1 410394 D 272633 CDS NP_757704.1 26553770 1040964 complement(412385..412567) 1 NC_004432.1 hypothetical protein 412567 1040964 MYPE3155 Mycoplasma penetrans HF-2 hypothetical protein NP_757704.1 412385 R 272633 CDS NP_757705.1 26553771 1040965 412846..413712 1 NC_004432.1 3-hydroxyisobutyrate dehydrogenase 413712 1040965 MYPE3160 Mycoplasma penetrans HF-2 3-hydroxyisobutyrate dehydrogenase NP_757705.1 412846 D 272633 CDS NP_757706.1 26553772 1040967 413714..416050 1 NC_004432.1 HAD family phosphatase 416050 1040967 MYPE3170 Mycoplasma penetrans HF-2 HAD family phosphatase NP_757706.1 413714 D 272633 CDS NP_757707.1 26553773 1040968 416257..417504 1 NC_004432.1 glucosamine-6-phosphate isomerase 417504 1040968 MYPE3180 Mycoplasma penetrans HF-2 glucosamine-6-phosphate isomerase NP_757707.1 416257 D 272633 CDS NP_757708.1 26553774 1040969 417731..420685 1 NC_004432.1 hypothetical protein 420685 1040969 MYPE3190 Mycoplasma penetrans HF-2 hypothetical protein NP_757708.1 417731 D 272633 CDS NP_757709.1 26553775 1040970 complement(420777..421331) 1 NC_004432.1 DNA-3-methyladenine glycosidase I 421331 1040970 MYPE3200 Mycoplasma penetrans HF-2 DNA-3-methyladenine glycosidase I NP_757709.1 420777 R 272633 CDS NP_757710.1 26553776 1040971 421510..424515 1 NC_004432.1 hypothetical protein 424515 1040971 MYPE3210 Mycoplasma penetrans HF-2 hypothetical protein NP_757710.1 421510 D 272633 CDS NP_757711.1 26553777 1040972 424743..425681 1 NC_004432.1 S-adenosyl-methyltransferase MraW 425681 mraW 1040972 mraW Mycoplasma penetrans HF-2 S-adenosyl-methyltransferase MraW NP_757711.1 424743 D 272633 CDS NP_757712.1 26553778 1040973 425681..426841 1 NC_004432.1 hypothetical protein 426841 1040973 MYPE3230 Mycoplasma penetrans HF-2 hypothetical protein NP_757712.1 425681 D 272633 CDS NP_757713.1 26553779 1040974 427007..427531 1 NC_004432.1 cation-transporting p-type ATPase 427531 1040974 MYPE3240 Mycoplasma penetrans HF-2 cation-transporting p-type ATPase NP_757713.1 427007 D 272633 CDS NP_757714.1 26553780 1040975 427627..430041 1 NC_004432.1 cation-transporting p-type ATPase 430041 1040975 MYPE3250 Mycoplasma penetrans HF-2 cation-transporting p-type ATPase NP_757714.1 427627 D 272633 CDS NP_757715.1 26553781 1040976 430065..430406 1 NC_004432.1 thioredoxin 430406 1040976 MYPE3260 Mycoplasma penetrans HF-2 thioredoxin NP_757715.1 430065 D 272633 CDS NP_757716.1 26553782 1040977 complement(430503..431150) 1 NC_004432.1 large-conductance mechanosensitive channel 431150 1040977 MYPE3270 Mycoplasma penetrans HF-2 large-conductance mechanosensitive channel NP_757716.1 430503 R 272633 CDS NP_757717.1 26553783 1040978 431282..431854 1 NC_004432.1 hypothetical protein 431854 1040978 MYPE3280 Mycoplasma penetrans HF-2 hypothetical protein NP_757717.1 431282 D 272633 CDS NP_757718.1 26553784 1040979 431890..432795 1 NC_004432.1 hypothetical protein 432795 1040979 MYPE3290 Mycoplasma penetrans HF-2 hypothetical protein NP_757718.1 431890 D 272633 CDS NP_757719.1 26553785 1040980 432923..433153 1 NC_004432.1 preprotein translocase subunit SecG 433153 secG 1040980 secG Mycoplasma penetrans HF-2 preprotein translocase subunit SecG NP_757719.1 432923 D 272633 CDS NP_757720.1 26553786 1040981 433163..435346 1 NC_004432.1 3'-5' exoribonuclease 435346 1040981 MYPE3310 Mycoplasma penetrans HF-2 3'-5' exoribonuclease NP_757720.1 433163 D 272633 CDS NP_757721.1 26553787 1040982 435571..436566 1 NC_004432.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 436566 1040982 MYPE3320 Mycoplasma penetrans HF-2 dihydroxyacetone kinase subunit DhaK NP_757721.1 435571 D 272633 CDS NP_757722.1 26553788 1040983 436575..437198 1 NC_004432.1 dihydroxyacetone kinase 437198 1040983 MYPE3330 Mycoplasma penetrans HF-2 dihydroxyacetone kinase NP_757722.1 436575 D 272633 CDS NP_757723.1 26553789 1040984 437202..437603 1 NC_004432.1 PTS system enzyme I 437603 1040984 MYPE3340 Mycoplasma penetrans HF-2 PTS system enzyme I NP_757723.1 437202 D 272633 CDS NP_757724.1 26553790 1040985 437778..438230 1 NC_004432.1 hypothetical protein 438230 1040985 MYPE3350 Mycoplasma penetrans HF-2 hypothetical protein NP_757724.1 437778 D 272633 CDS NP_757725.1 26553791 1040986 438223..438615 1 NC_004432.1 diacylglycerol kinase 438615 1040986 MYPE3360 Mycoplasma penetrans HF-2 diacylglycerol kinase NP_757725.1 438223 D 272633 CDS NP_757726.1 26553792 1040987 438704..439516 1 NC_004432.1 GTP-binding protein Era 439516 1040987 MYPE3370 Mycoplasma penetrans HF-2 GTP-binding protein Era NP_757726.1 438704 D 272633 CDS NP_757727.1 26553793 1040988 439516..440220 1 NC_004432.1 hypothetical protein 440220 1040988 MYPE3380 Mycoplasma penetrans HF-2 hypothetical protein NP_757727.1 439516 D 272633 CDS NP_757728.1 26553794 1040989 440246..441634 1 NC_004432.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 441634 1040989 MYPE3390 Mycoplasma penetrans HF-2 glycyl-tRNA synthetase NP_757728.1 440246 D 272633 CDS NP_757729.1 26553795 1040990 441624..443690 1 NC_004432.1 DNA primase 443690 1040990 MYPE3400 Mycoplasma penetrans HF-2 DNA primase NP_757729.1 441624 D 272633 CDS NP_757730.1 26553796 1040991 444780..445322 1 NC_004432.1 MYPE8480 paralog; hypothetical protein 445322 1040991 MYPE3410 Mycoplasma penetrans HF-2 hypothetical protein NP_757730.1 444780 D 272633 CDS NP_757731.1 26553797 1040992 445408..445848 1 NC_004432.1 MYPE8480 paralog; hypothetical protein 445848 1040992 MYPE3420 Mycoplasma penetrans HF-2 hypothetical protein NP_757731.1 445408 D 272633 CDS NP_757732.1 26553798 1040993 446130..446402 1 NC_004432.1 MYPE8480 paralog; hypothetical protein 446402 1040993 MYPE3430 Mycoplasma penetrans HF-2 hypothetical protein NP_757732.1 446130 D 272633 CDS NP_757733.1 26553799 1040994 complement(446789..448453) 1 NC_004432.1 integral membrane protein 448453 1040994 MYPE3440 Mycoplasma penetrans HF-2 integral membrane protein NP_757733.1 446789 R 272633 CDS NP_757734.1 26553800 1040995 448849..450246 1 NC_004432.1 amino acid permease 450246 1040995 MYPE3450 Mycoplasma penetrans HF-2 amino acid permease NP_757734.1 448849 D 272633 CDS NP_757735.1 26553801 1040996 complement(450327..451229) 1 NC_004432.1 hypothetical protein 451229 1040996 MYPE3460 Mycoplasma penetrans HF-2 hypothetical protein NP_757735.1 450327 R 272633 CDS NP_757736.1 26553802 1041007 452334..453665 1 NC_004432.1 MYPE3080 paralog; ABC transporter ATP-binding protein 453665 1041007 MYPE3490 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757736.1 452334 D 272633 CDS NP_757737.1 26553803 1041009 453677..454114 1 NC_004432.1 histidine triad protein HIT 454114 1041009 MYPE3500 Mycoplasma penetrans HF-2 histidine triad protein HIT NP_757737.1 453677 D 272633 CDS NP_757738.1 26553804 1041010 454200..454409 1 NC_004432.1 hypothetical protein 454409 1041010 MYPE3510 Mycoplasma penetrans HF-2 hypothetical protein NP_757738.1 454200 D 272633 CDS NP_757739.1 26553805 1041011 455243..455548 1 NC_004432.1 hypothetical protein 455548 1041011 MYPE3520 Mycoplasma penetrans HF-2 hypothetical protein NP_757739.1 455243 D 272633 CDS NP_757740.1 26553806 1041012 455952..456392 1 NC_004432.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 456392 smpB 1041012 smpB Mycoplasma penetrans HF-2 SsrA-binding protein NP_757740.1 455952 D 272633 CDS NP_757741.1 26553807 1041013 456451..457626 1 NC_004432.1 hippurate hydrolase 457626 1041013 MYPE3540 Mycoplasma penetrans HF-2 hippurate hydrolase NP_757741.1 456451 D 272633 CDS NP_757742.1 26553808 1041014 457642..459048 1 NC_004432.1 hypothetical protein 459048 1041014 MYPE3550 Mycoplasma penetrans HF-2 hypothetical protein NP_757742.1 457642 D 272633 CDS NP_757743.1 26553809 1041015 459060..460013 1 NC_004432.1 MYPE960 paralog; ABC transporter ATP-binding protein 460013 1041015 MYPE3560 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757743.1 459060 D 272633 CDS NP_757744.1 26553810 1041016 460360..461895 1 NC_004432.1 ABC transporter ATP-binding protein 461895 1041016 MYPE3570 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757744.1 460360 D 272633 CDS NP_757745.1 26553811 1041017 462043..464679 1 NC_004432.1 paralog family; hypothetical protein 464679 1041017 MYPE3580 Mycoplasma penetrans HF-2 hypothetical protein NP_757745.1 462043 D 272633 CDS NP_757746.1 26553812 1041018 464867..467509 1 NC_004432.1 MYPE3580 paralog; hypothetical protein 467509 1041018 MYPE3590 Mycoplasma penetrans HF-2 hypothetical protein NP_757746.1 464867 D 272633 CDS NP_757747.1 26553813 1041019 467710..470352 1 NC_004432.1 MYPE3580 paralog; hypothetical protein 470352 1041019 MYPE3600 Mycoplasma penetrans HF-2 hypothetical protein NP_757747.1 467710 D 272633 CDS NP_757748.1 26553814 1041020 470542..473187 1 NC_004432.1 MYPE3580 paralog; hypothetical protein 473187 1041020 MYPE3610 Mycoplasma penetrans HF-2 hypothetical protein NP_757748.1 470542 D 272633 CDS NP_757749.1 26553815 1041021 473282..474910 1 NC_004432.1 hypothetical protein 474910 1041021 MYPE3620 Mycoplasma penetrans HF-2 hypothetical protein NP_757749.1 473282 D 272633 CDS NP_757750.1 26553816 1041022 475094..476080 1 NC_004432.1 MYPE3080 paralog; ABC transporter ATP-binding protein 476080 1041022 MYPE3630 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757750.1 475094 D 272633 CDS NP_757751.1 26553817 1041023 476233..477228 1 NC_004432.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 477228 1041023 MYPE3640 Mycoplasma penetrans HF-2 glycerol-3-phosphate acyltransferase PlsX NP_757751.1 476233 D 272633 CDS NP_757752.1 26553818 1041024 477203..477937 1 NC_004432.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 477937 rnc 1041024 rnc Mycoplasma penetrans HF-2 ribonuclease III NP_757752.1 477203 D 272633 CDS NP_757753.1 26553819 1041025 complement(477996..478436) 1 NC_004432.1 hypothetical protein 478436 1041025 MYPE3660 Mycoplasma penetrans HF-2 hypothetical protein NP_757753.1 477996 R 272633 CDS NP_757754.1 26553820 1041026 478578..479063 1 NC_004432.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 479063 greA 1041026 greA Mycoplasma penetrans HF-2 transcription elongation factor GreA NP_757754.1 478578 D 272633 CDS NP_757755.1 26553821 1041073 479674..480987 1 NC_004432.1 hypothetical protein 480987 1041073 MYPE3700 Mycoplasma penetrans HF-2 hypothetical protein NP_757755.1 479674 D 272633 CDS NP_757756.1 26553822 1041076 481048..481518 1 NC_004432.1 NADH dehydrogenase 481518 1041076 MYPE3710 Mycoplasma penetrans HF-2 NADH dehydrogenase NP_757756.1 481048 D 272633 CDS NP_757757.1 26553823 1041084 481623..481862 1 NC_004432.1 hypothetical protein 481862 1041084 MYPE3720 Mycoplasma penetrans HF-2 hypothetical protein NP_757757.1 481623 D 272633 CDS NP_757758.1 26553824 1041085 482025..482777 1 NC_004432.1 triose phosphate isomerase 482777 1041085 MYPE3730 Mycoplasma penetrans HF-2 triose phosphate isomerase NP_757758.1 482025 D 272633 CDS NP_757759.1 26553825 1041089 482767..484287 1 NC_004432.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 484287 1041089 MYPE3740 Mycoplasma penetrans HF-2 phosphoglyceromutase NP_757759.1 482767 D 272633 CDS NP_757760.1 26553826 1041095 484414..485766 1 NC_004432.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 485766 eno 1041095 eno Mycoplasma penetrans HF-2 phosphopyruvate hydratase NP_757760.1 484414 D 272633 CDS NP_757761.1 26553827 1041096 complement(485853..486437) 1 NC_004432.1 hypothetical protein 486437 1041096 MYPE3760 Mycoplasma penetrans HF-2 hypothetical protein NP_757761.1 485853 R 272633 CDS NP_757762.1 26553828 1041097 486573..487211 1 NC_004432.1 hypothetical protein 487211 1041097 MYPE3770 Mycoplasma penetrans HF-2 hypothetical protein NP_757762.1 486573 D 272633 CDS NP_757763.1 26553829 1041098 487325..488299 1 NC_004432.1 hypothetical protein 488299 1041098 MYPE3780 Mycoplasma penetrans HF-2 hypothetical protein NP_757763.1 487325 D 272633 CDS NP_757764.1 26553830 1041099 complement(488365..490482) 1 NC_004432.1 ATP-dependent protease binding subunit 490482 1041099 MYPE3790 Mycoplasma penetrans HF-2 ATP-dependent protease binding subunit NP_757764.1 488365 R 272633 CDS NP_757765.1 26553831 1041100 490735..491457 1 NC_004432.1 hypothetical protein 491457 1041100 MYPE3800 Mycoplasma penetrans HF-2 hypothetical protein NP_757765.1 490735 D 272633 CDS NP_757766.1 26553832 1041101 491758..492075 1 NC_004432.1 hypothetical protein 492075 1041101 MYPE3810 Mycoplasma penetrans HF-2 hypothetical protein NP_757766.1 491758 D 272633 CDS NP_757767.1 26553833 1041104 492101..493996 1 NC_004432.1 hypothetical protein 493996 1041104 MYPE3820 Mycoplasma penetrans HF-2 hypothetical protein NP_757767.1 492101 D 272633 CDS NP_757768.1 26553834 1041105 494341..494712 1 NC_004432.1 hypothetical protein 494712 1041105 MYPE3830 Mycoplasma penetrans HF-2 hypothetical protein NP_757768.1 494341 D 272633 CDS NP_757769.1 26553835 1041109 494732..499027 1 NC_004432.1 hypothetical protein 499027 1041109 MYPE3840 Mycoplasma penetrans HF-2 hypothetical protein NP_757769.1 494732 D 272633 CDS NP_757770.1 26553836 1041112 499041..502676 1 NC_004432.1 hypothetical protein 502676 1041112 MYPE3850 Mycoplasma penetrans HF-2 hypothetical protein NP_757770.1 499041 D 272633 CDS NP_757771.1 26553837 1041113 502690..506826 1 NC_004432.1 hypothetical protein 506826 1041113 MYPE3860 Mycoplasma penetrans HF-2 hypothetical protein NP_757771.1 502690 D 272633 CDS NP_757772.1 26553838 1041115 507117..508385 1 NC_004432.1 dihydroorotase 508385 1041115 MYPE3870 Mycoplasma penetrans HF-2 dihydroorotase NP_757772.1 507117 D 272633 CDS NP_757773.2 161723284 1041118 508626..508898 1 NC_004432.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 508898 rpsO 1041118 rpsO Mycoplasma penetrans HF-2 30S ribosomal protein S15 NP_757773.2 508626 D 272633 CDS NP_757774.1 26553840 1041130 508932..511331 1 NC_004432.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 511331 leuS 1041130 leuS Mycoplasma penetrans HF-2 leucyl-tRNA synthetase NP_757774.1 508932 D 272633 CDS NP_757775.2 161723283 1041131 511376..511537 1 NC_004432.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 511537 rpmG 1041131 rpmG Mycoplasma penetrans HF-2 50S ribosomal protein L33 NP_757775.2 511376 D 272633 CDS NP_757776.1 26553842 1041132 511583..512635 1 NC_004432.1 aminopeptidase 512635 1041132 MYPE3910 Mycoplasma penetrans HF-2 aminopeptidase NP_757776.1 511583 D 272633 CDS NP_757777.1 26553843 1041133 512783..514168 1 NC_004432.1 aldehyde dehydrogenase 514168 1041133 MYPE3920 Mycoplasma penetrans HF-2 aldehyde dehydrogenase NP_757777.1 512783 D 272633 CDS NP_757778.1 26553844 1041134 514177..514980 1 NC_004432.1 esterase 514980 1041134 MYPE3930 Mycoplasma penetrans HF-2 esterase NP_757778.1 514177 D 272633 CDS NP_757779.1 26553845 1041135 515030..515278 1 NC_004432.1 hypothetical protein 515278 1041135 MYPE3940 Mycoplasma penetrans HF-2 hypothetical protein NP_757779.1 515030 D 272633 CDS NP_757780.1 26553846 1041136 515414..516268 1 NC_004432.1 hypothetical protein 516268 1041136 MYPE3950 Mycoplasma penetrans HF-2 hypothetical protein NP_757780.1 515414 D 272633 CDS NP_757781.1 26553847 1041137 516292..518019 1 NC_004432.1 two-component regulator 518019 1041137 MYPE3960 Mycoplasma penetrans HF-2 two-component regulator NP_757781.1 516292 D 272633 CDS NP_757782.1 26553848 1041138 518080..519546 1 NC_004432.1 hypothetical protein 519546 1041138 MYPE3970 Mycoplasma penetrans HF-2 hypothetical protein NP_757782.1 518080 D 272633 CDS NP_757783.1 26553849 1041140 519652..520161 1 NC_004432.1 thiol peroxidase 520161 1041140 MYPE3980 Mycoplasma penetrans HF-2 thiol peroxidase NP_757783.1 519652 D 272633 CDS NP_757784.1 26553850 1041169 complement(520294..520491) 1 NC_004432.1 hypothetical protein 520491 1041169 MYPE3985 Mycoplasma penetrans HF-2 hypothetical protein NP_757784.1 520294 R 272633 CDS NP_757785.1 26553851 1041170 520708..523365 1 NC_004432.1 hypothetical protein 523365 1041170 MYPE3990 Mycoplasma penetrans HF-2 hypothetical protein NP_757785.1 520708 D 272633 CDS NP_757786.1 26553852 1041171 523557..526139 1 NC_004432.1 hypothetical protein 526139 1041171 MYPE4000 Mycoplasma penetrans HF-2 hypothetical protein NP_757786.1 523557 D 272633 CDS NP_757787.1 26553853 1041172 complement(526614..527483) 1 NC_004432.1 hypothetical protein 527483 1041172 MYPE4010 Mycoplasma penetrans HF-2 hypothetical protein NP_757787.1 526614 R 272633 CDS NP_757788.1 26553854 1041173 complement(527560..528378) 1 NC_004432.1 integral membrane protein 528378 1041173 MYPE4020 Mycoplasma penetrans HF-2 integral membrane protein NP_757788.1 527560 R 272633 CDS NP_757789.1 26553855 1041174 complement(528514..528762) 1 NC_004432.1 ribosomal protein L28 528762 1041174 MYPE4030 Mycoplasma penetrans HF-2 ribosomal protein L28 NP_757789.1 528514 R 272633 CDS NP_757790.1 26553856 1041175 528972..530333 1 NC_004432.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 530333 asnC 1041175 asnC Mycoplasma penetrans HF-2 asparaginyl-tRNA synthetase NP_757790.1 528972 D 272633 CDS NP_757791.1 26553857 1041176 530361..531014 1 NC_004432.1 phosphatidylglycerophosphate synthase 531014 1041176 MYPE4050 Mycoplasma penetrans HF-2 phosphatidylglycerophosphate synthase NP_757791.1 530361 D 272633 CDS NP_757792.1 26553858 1041177 531024..532304 1 NC_004432.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 532304 1041177 MYPE4060 Mycoplasma penetrans HF-2 seryl-tRNA synthetase NP_757792.1 531024 D 272633 CDS NP_757793.1 26553859 1041178 533074..536010 1 NC_004432.1 hypothetical protein 536010 1041178 MYPE4070 Mycoplasma penetrans HF-2 hypothetical protein NP_757793.1 533074 D 272633 CDS NP_757794.1 26553860 1041179 536291..538108 1 NC_004432.1 hypothetical protein 538108 1041179 MYPE4080 Mycoplasma penetrans HF-2 hypothetical protein NP_757794.1 536291 D 272633 CDS NP_757795.1 26553861 1041180 538342..540138 1 NC_004432.1 MYPE2470 paralog; ABC transporter ATP-binding protein 540138 1041180 MYPE4090 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757795.1 538342 D 272633 CDS NP_757796.1 26553862 1041181 540141..542132 1 NC_004432.1 MYPE2470 paralog; ABC transporter ATP-binding protein 542132 1041181 MYPE4100 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_757796.1 540141 D 272633 CDS NP_757797.1 26553863 1041182 542141..543529 1 NC_004432.1 aldehyde dehydrogenase 543529 1041182 MYPE4110 Mycoplasma penetrans HF-2 aldehyde dehydrogenase NP_757797.1 542141 D 272633 CDS NP_757798.1 26553864 1041183 543652..543930 1 NC_004432.1 hypothetical protein 543930 1041183 MYPE4120 Mycoplasma penetrans HF-2 hypothetical protein NP_757798.1 543652 D 272633 CDS NP_757799.1 26553865 1041184 543945..545666 1 NC_004432.1 dihydroacetone kinase 545666 1041184 MYPE4130 Mycoplasma penetrans HF-2 dihydroacetone kinase NP_757799.1 543945 D 272633 CDS NP_757800.1 26553866 1041185 545803..547926 1 NC_004432.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 547926 1041185 MYPE4140 Mycoplasma penetrans HF-2 DNA topoisomerase I NP_757800.1 545803 D 272633 CDS NP_757801.1 26553867 1041186 complement(547974..548729) 1 NC_004432.1 hypothetical protein 548729 1041186 MYPE4150 Mycoplasma penetrans HF-2 hypothetical protein NP_757801.1 547974 R 272633 CDS NP_757802.1 26553868 1041187 complement(548811..549053) 1 NC_004432.1 acyl carrier protein 549053 1041187 MYPE4160 Mycoplasma penetrans HF-2 acyl carrier protein NP_757802.1 548811 R 272633 CDS NP_757803.1 26553869 1041188 complement(549175..549516) 1 NC_004432.1 excinuclease 549516 1041188 MYPE4170 Mycoplasma penetrans HF-2 excinuclease NP_757803.1 549175 R 272633 CDS NP_757804.1 26553870 1041189 549650..551062 1 NC_004432.1 transposase for IS232-like insertion sequence element 551062 1041189 MYPE4180 Mycoplasma penetrans HF-2 transposase for IS232-like insertion sequence element NP_757804.1 549650 D 272633 CDS NP_757805.1 26553871 1041191 551064..551825 1 NC_004432.1 insertion sequence IS232 ATP-binding protein 551825 1041191 MYPE4190 Mycoplasma penetrans HF-2 insertion sequence IS232 ATP-binding protein NP_757805.1 551064 D 272633 CDS NP_757806.1 26553872 1041192 complement(551771..552676) 1 NC_004432.1 hypothetical protein 552676 1041192 MYPE4200 Mycoplasma penetrans HF-2 hypothetical protein NP_757806.1 551771 R 272633 CDS NP_757807.1 26553873 1041193 553029..554003 1 NC_004432.1 hypothetical protein 554003 1041193 MYPE4210 Mycoplasma penetrans HF-2 hypothetical protein NP_757807.1 553029 D 272633 CDS NP_757808.1 26553874 1041194 554182..555438 1 NC_004432.1 paralog family; hypothetical protein 555438 1041194 MYPE4220 Mycoplasma penetrans HF-2 hypothetical protein NP_757808.1 554182 D 272633 CDS NP_757809.1 26553875 1041195 complement(555574..556953) 1 NC_004432.1 paralog family, similar to Pfam domain Archaea bacterial proteins of unknown function; hypothetical protein 556953 1041195 MYPE4230 Mycoplasma penetrans HF-2 hypothetical protein NP_757809.1 555574 R 272633 CDS NP_757810.1 26553876 1041196 557199..557510 1 NC_004432.1 hypothetical protein 557510 1041196 MYPE4240 Mycoplasma penetrans HF-2 hypothetical protein NP_757810.1 557199 D 272633 CDS NP_757811.1 26553877 1041198 557591..559162 1 NC_004432.1 hypothetical protein 559162 1041198 MYPE4250 Mycoplasma penetrans HF-2 hypothetical protein NP_757811.1 557591 D 272633 CDS NP_757812.1 26553878 1041199 559204..560130 1 NC_004432.1 6-phosphogluconate dehydrogenase 560130 1041199 MYPE4260 Mycoplasma penetrans HF-2 6-phosphogluconate dehydrogenase NP_757812.1 559204 D 272633 CDS NP_757813.1 26553879 1041200 560260..561105 1 NC_004432.1 hypothetical protein 561105 1041200 MYPE4270 Mycoplasma penetrans HF-2 hypothetical protein NP_757813.1 560260 D 272633 CDS NP_757814.1 26553880 1041201 561122..561688 1 NC_004432.1 proline dipeptidase 561688 1041201 MYPE4280 Mycoplasma penetrans HF-2 proline dipeptidase NP_757814.1 561122 D 272633 CDS NP_757815.1 26553881 1041202 561795..562913 1 NC_004432.1 adenylosuccinate synthetase 562913 1041202 MYPE4290 Mycoplasma penetrans HF-2 adenylosuccinate synthetase NP_757815.1 561795 D 272633 CDS NP_757816.1 26553882 1041203 563054..564295 1 NC_004432.1 hypothetical protein 564295 1041203 MYPE4300 Mycoplasma penetrans HF-2 hypothetical protein NP_757816.1 563054 D 272633 CDS NP_757817.1 26553883 1041204 564326..566824 1 NC_004432.1 similar to immuno-dominant variable surface antigen of Entamoeba histolytica CAA38847.1, Expect=3.0e-16, Identities=29%; integral membrane protein 566824 1041204 MYPE4310 Mycoplasma penetrans HF-2 integral membrane protein NP_757817.1 564326 D 272633 CDS NP_757818.1 26553884 1041205 566827..567645 1 NC_004432.1 integral membrane protein 567645 1041205 MYPE4320 Mycoplasma penetrans HF-2 integral membrane protein NP_757818.1 566827 D 272633 CDS NP_757819.1 26553885 1041206 567854..569488 1 NC_004432.1 paralog family; hypothetical protein 569488 1041206 MYPE4330 Mycoplasma penetrans HF-2 hypothetical protein NP_757819.1 567854 D 272633 CDS NP_757820.1 26553886 1041207 569953..571431 1 NC_004432.1 MYPE4340 paralog; hypothetical protein 571431 1041207 MYPE4340 Mycoplasma penetrans HF-2 hypothetical protein NP_757820.1 569953 D 272633 CDS NP_757821.1 26553887 1041208 571884..573491 1 NC_004432.1 MYPE4340 paralog; hypothetical protein 573491 1041208 MYPE4350 Mycoplasma penetrans HF-2 hypothetical protein NP_757821.1 571884 D 272633 CDS NP_757822.1 26553888 1041209 573754..575310 1 NC_004432.1 MYPE4340 paralog; hypothetical protein 575310 1041209 MYPE4360 Mycoplasma penetrans HF-2 hypothetical protein NP_757822.1 573754 D 272633 CDS NP_757823.1 26553889 1041210 575507..575845 1 NC_004432.1 hypothetical protein 575845 1041210 MYPE4370 Mycoplasma penetrans HF-2 hypothetical protein NP_757823.1 575507 D 272633 CDS NP_757824.1 26553890 1041211 575939..577297 1 NC_004432.1 membrane nuclease 577297 1041211 MYPE4380 Mycoplasma penetrans HF-2 membrane nuclease NP_757824.1 575939 D 272633 CDS NP_757825.1 26553891 1041212 complement(577350..577676) 1 NC_004432.1 hypothetical protein 577676 1041212 MYPE4390 Mycoplasma penetrans HF-2 hypothetical protein NP_757825.1 577350 R 272633 CDS NP_757826.1 26553892 1041213 complement(577744..578289) 1 NC_004432.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 578289 1041213 MYPE4400 Mycoplasma penetrans HF-2 inorganic pyrophosphatase NP_757826.1 577744 R 272633 CDS NP_757827.1 26553893 1041214 578452..579363 1 NC_004432.1 integral membrane protein 579363 1041214 MYPE4410 Mycoplasma penetrans HF-2 integral membrane protein NP_757827.1 578452 D 272633 CDS NP_757828.1 26553894 1041215 579621..579923 1 NC_004432.1 50S ribosomal protein L21 579923 rplU 1041215 rplU Mycoplasma penetrans HF-2 50S ribosomal protein L21 NP_757828.1 579621 D 272633 CDS NP_757829.1 26553895 1041216 579928..580236 1 NC_004432.1 hypothetical protein 580236 1041216 MYPE4430 Mycoplasma penetrans HF-2 hypothetical protein NP_757829.1 579928 D 272633 CDS NP_757830.1 26553896 1041217 580240..580527 1 NC_004432.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 580527 rpmA 1041217 rpmA Mycoplasma penetrans HF-2 50S ribosomal protein L27 NP_757830.1 580240 D 272633 CDS NP_757831.1 26553897 1041218 580606..581082 1 NC_004432.1 hypothetical protein 581082 1041218 MYPE4450 Mycoplasma penetrans HF-2 hypothetical protein NP_757831.1 580606 D 272633 CDS NP_757832.1 26553898 1041219 581220..581858 1 NC_004432.1 d-ribulose-5-phosphate 3 epimerase 581858 1041219 MYPE4460 Mycoplasma penetrans HF-2 d-ribulose-5-phosphate 3 epimerase NP_757832.1 581220 D 272633 CDS NP_757833.1 26553899 1041220 581933..583861 1 NC_004432.1 BglG family transcriptional antiterminator 583861 1041220 MYPE4470 Mycoplasma penetrans HF-2 BglG family transcriptional antiterminator NP_757833.1 581933 D 272633 CDS NP_757834.1 26553900 1041221 583867..584301 1 NC_004432.1 PTS system enzyme IIA component 584301 1041221 MYPE4480 Mycoplasma penetrans HF-2 PTS system enzyme IIA component NP_757834.1 583867 D 272633 CDS NP_757835.1 26553901 1041223 584304..584594 1 NC_004432.1 hypothetical protein 584594 1041223 MYPE4490 Mycoplasma penetrans HF-2 hypothetical protein NP_757835.1 584304 D 272633 CDS NP_757836.1 26553902 1041224 584630..586141 1 NC_004432.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 586141 ulaA 1041224 ulaA Mycoplasma penetrans HF-2 PTS system ascorbate-specific transporter subunit IIC NP_757836.1 584630 D 272633 CDS NP_757837.1 26553903 1041226 586141..588111 1 NC_004432.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 588111 1041226 MYPE4510 Mycoplasma penetrans HF-2 transketolase NP_757837.1 586141 D 272633 CDS NP_757838.1 26553904 1041230 588098..588448 1 NC_004432.1 HAD family phosphatase 588448 1041230 MYPE4520 Mycoplasma penetrans HF-2 HAD family phosphatase NP_757838.1 588098 D 272633 CDS NP_757839.1 26553905 1041233 588429..588746 1 NC_004432.1 hypothetical protein 588746 1041233 MYPE4530 Mycoplasma penetrans HF-2 hypothetical protein NP_757839.1 588429 D 272633 CDS NP_757840.1 26553906 1041234 588932..591994 1 NC_004432.1 PTS system enzyme IIBC components 591994 1041234 MYPE4540 Mycoplasma penetrans HF-2 PTS system enzyme IIBC components NP_757840.1 588932 D 272633 CDS NP_757841.1 26553907 1041235 592078..593508 1 NC_004432.1 beta glucosidase 593508 1041235 MYPE4550 Mycoplasma penetrans HF-2 beta glucosidase NP_757841.1 592078 D 272633 CDS NP_757842.1 26553908 1041238 593532..594965 1 NC_004432.1 beta glucosidase 594965 1041238 MYPE4560 Mycoplasma penetrans HF-2 beta glucosidase NP_757842.1 593532 D 272633 CDS NP_757843.1 26553909 1041239 complement(595023..595898) 1 NC_004432.1 hypothetical protein 595898 1041239 MYPE4570 Mycoplasma penetrans HF-2 hypothetical protein NP_757843.1 595023 R 272633 CDS NP_757844.1 26553910 1041240 complement(595901..596908) 1 NC_004432.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 596908 1041240 MYPE4580 Mycoplasma penetrans HF-2 tryptophanyl-tRNA synthetase NP_757844.1 595901 R 272633 CDS NP_757845.1 26553911 1041241 597066..597569 1 NC_004432.1 hypothetical protein 597569 1041241 MYPE4590 Mycoplasma penetrans HF-2 hypothetical protein NP_757845.1 597066 D 272633 CDS NP_757846.1 26553912 1041244 597589..598353 1 NC_004432.1 hypothetical protein 598353 1041244 MYPE4600 Mycoplasma penetrans HF-2 hypothetical protein NP_757846.1 597589 D 272633 CDS NP_757847.1 26553913 1041246 598353..598730 1 NC_004432.1 hypothetical protein 598730 1041246 MYPE4610 Mycoplasma penetrans HF-2 hypothetical protein NP_757847.1 598353 D 272633 CDS NP_757848.1 26553914 1041247 complement(598846..599940) 1 NC_004432.1 alcohol dehydrogenase 599940 1041247 MYPE4620 Mycoplasma penetrans HF-2 alcohol dehydrogenase NP_757848.1 598846 R 272633 CDS NP_757849.1 26553915 1041248 600204..601106 1 NC_004432.1 paralog family; hypothetical protein 601106 1041248 MYPE4630 Mycoplasma penetrans HF-2 hypothetical protein NP_757849.1 600204 D 272633 CDS NP_757850.1 26553916 1041249 601297..601554 1 NC_004432.1 hypothetical protein 601554 1041249 MYPE4640 Mycoplasma penetrans HF-2 hypothetical protein NP_757850.1 601297 D 272633 CDS NP_757851.1 26553917 1041250 601547..602470 1 NC_004432.1 MYPE4630 paralog; hypothetical protein 602470 1041250 MYPE4650 Mycoplasma penetrans HF-2 hypothetical protein NP_757851.1 601547 D 272633 CDS NP_757852.1 26553918 1041251 602580..603440 1 NC_004432.1 MYPE4630 paralog; hypothetical protein 603440 1041251 MYPE4660 Mycoplasma penetrans HF-2 hypothetical protein NP_757852.1 602580 D 272633 CDS NP_757853.1 26553919 1041252 603698..604621 1 NC_004432.1 MYPE4630 paralog; hypothetical protein 604621 1041252 MYPE4680 Mycoplasma penetrans HF-2 hypothetical protein NP_757853.1 603698 D 272633 CDS NP_757854.1 26553920 1041253 604747..606036 1 NC_004432.1 glucose-6-phosphate isomerase 606036 1041253 MYPE4690 Mycoplasma penetrans HF-2 glucose-6-phosphate isomerase NP_757854.1 604747 D 272633 CDS NP_757855.1 26553921 1041254 606148..607233 1 NC_004432.1 hypothetical protein 607233 1041254 MYPE4700 Mycoplasma penetrans HF-2 hypothetical protein NP_757855.1 606148 D 272633 CDS NP_757856.1 26553922 1041294 607304..608740 1 NC_004432.1 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 608740 1041294 MYPE4710 Mycoplasma penetrans HF-2 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase NP_757856.1 607304 D 272633 CDS NP_757857.1 26553923 1041295 complement(608888..609787) 1 NC_004432.1 paralog family; aldo/keto reductase 609787 1041295 MYPE4720 Mycoplasma penetrans HF-2 aldo/keto reductase NP_757857.1 608888 R 272633 CDS NP_757858.1 26553924 1041296 610069..610314 1 NC_004432.1 similar to CagA protein of Helicobacter pylori AJ269854, Expect=2.4e-01, Identities=40%; hypothetical protein 610314 1041296 MYPE4730 Mycoplasma penetrans HF-2 hypothetical protein NP_757858.1 610069 D 272633 CDS NP_757859.1 26553925 1041298 610298..610750 1 NC_004432.1 MYPE 5680paralog; hypothetical protein 610750 1041298 MYPE4740 Mycoplasma penetrans HF-2 hypothetical protein NP_757859.1 610298 D 272633 CDS NP_757860.1 26553926 1041300 610827..611297 1 NC_004432.1 MYPE 5680paralog; hypothetical protein 611297 1041300 MYPE4750 Mycoplasma penetrans HF-2 hypothetical protein NP_757860.1 610827 D 272633 CDS NP_757861.1 26553927 1041302 611374..611823 1 NC_004432.1 MYPE 5680paralog; hypothetical protein 611823 1041302 MYPE4760 Mycoplasma penetrans HF-2 hypothetical protein NP_757861.1 611374 D 272633 CDS NP_757862.1 26553928 1041303 612044..612280 1 NC_004432.1 hypothetical protein 612280 1041303 MYPE4765 Mycoplasma penetrans HF-2 hypothetical protein NP_757862.1 612044 D 272633 CDS NP_757863.1 26553929 1041304 612492..612950 1 NC_004432.1 hypothetical protein 612950 1041304 MYPE4770 Mycoplasma penetrans HF-2 hypothetical protein NP_757863.1 612492 D 272633 CDS NP_757864.1 26553930 1041305 613010..614233 1 NC_004432.1 ATP/GTP-binding protein 614233 1041305 MYPE4780 Mycoplasma penetrans HF-2 ATP/GTP-binding protein NP_757864.1 613010 D 272633 CDS NP_757865.1 26553931 1041306 614238..615110 1 NC_004432.1 ATP/GTP-binding protein 615110 1041306 MYPE4790 Mycoplasma penetrans HF-2 ATP/GTP-binding protein NP_757865.1 614238 D 272633 CDS NP_757866.1 26553932 1041307 615123..616535 1 NC_004432.1 ATP/GTP-binding protein 616535 1041307 MYPE4800 Mycoplasma penetrans HF-2 ATP/GTP-binding protein NP_757866.1 615123 D 272633 CDS NP_757867.1 26553933 1041309 complement(616665..617534) 1 NC_004432.1 MYPE4720 paralog; oxidoreductase 617534 1041309 MYPE4810 Mycoplasma penetrans HF-2 oxidoreductase NP_757867.1 616665 R 272633 CDS NP_757868.1 26553934 1041310 complement(617656..618138) 1 NC_004432.1 hypothetical protein 618138 1041310 MYPE4820 Mycoplasma penetrans HF-2 hypothetical protein NP_757868.1 617656 R 272633 CDS NP_757869.1 26553935 1041312 618467..621421 1 NC_004432.1 similar to 115 kDa protein of Mycoplasma hyorhinis, Expect=3.7e-162, Identities=34%; structural maintenance of chromosomes SMC superfamily proteins 621421 1041312 MYPE4830 Mycoplasma penetrans HF-2 structural maintenance of chromosomes SMC superfamily proteins NP_757869.1 618467 D 272633 CDS NP_757870.1 26553936 1041313 621447..622511 1 NC_004432.1 signal recognition particle GTPase FtsY 622511 1041313 MYPE4840 Mycoplasma penetrans HF-2 signal recognition particle GTPase FtsY NP_757870.1 621447 D 272633 CDS NP_757871.1 26553937 1041314 622513..622836 1 NC_004432.1 hypothetical protein 622836 1041314 MYPE4850 Mycoplasma penetrans HF-2 hypothetical protein NP_757871.1 622513 D 272633 CDS NP_757872.1 26553938 1041315 622821..623399 1 NC_004432.1 hypothetical protein 623399 1041315 MYPE4860 Mycoplasma penetrans HF-2 hypothetical protein NP_757872.1 622821 D 272633 CDS NP_757873.1 26553939 1041316 623606..624421 1 NC_004432.1 hypothetical protein 624421 1041316 MYPE4870 Mycoplasma penetrans HF-2 hypothetical protein NP_757873.1 623606 D 272633 CDS NP_757874.1 26553940 1041317 complement(624803..625819) 1 NC_004432.1 IS1630-like transposase 625819 1041317 MYPE4880 Mycoplasma penetrans HF-2 IS1630-like transposase NP_757874.1 624803 R 272633 CDS NP_757875.1 26553941 1041318 complement(625954..626835) 1 NC_004432.1 hypothetical protein 626835 1041318 MYPE4890 Mycoplasma penetrans HF-2 hypothetical protein NP_757875.1 625954 R 272633 CDS NP_757876.1 26553942 1041319 626965..627510 1 NC_004432.1 hypothetical protein 627510 1041319 MYPE4900 Mycoplasma penetrans HF-2 hypothetical protein NP_757876.1 626965 D 272633 CDS NP_757877.1 26553943 1041327 627628..628464 1 NC_004432.1 hypothetical protein 628464 1041327 MYPE4910 Mycoplasma penetrans HF-2 hypothetical protein NP_757877.1 627628 D 272633 CDS NP_757878.1 26553944 1041328 628588..628818 1 NC_004432.1 hypothetical protein 628818 1041328 MYPE4920 Mycoplasma penetrans HF-2 hypothetical protein NP_757878.1 628588 D 272633 CDS NP_757879.1 26553945 1041329 complement(628888..630201) 1 NC_004432.1 hypothetical protein 630201 1041329 MYPE4930 Mycoplasma penetrans HF-2 hypothetical protein NP_757879.1 628888 R 272633 CDS NP_757880.1 26553946 1041330 complement(630182..631369) 1 NC_004432.1 cytosine-specific DNA methyltransferase 631369 1041330 MYPE4940 Mycoplasma penetrans HF-2 cytosine-specific DNA methyltransferase NP_757880.1 630182 R 272633 CDS NP_757881.1 26553947 1041331 631567..632466 1 NC_004432.1 haloacid dehalogenase 632466 1041331 MYPE4950 Mycoplasma penetrans HF-2 haloacid dehalogenase NP_757881.1 631567 D 272633 CDS NP_757882.1 26553948 1041333 632713..634854 1 NC_004432.1 anaerobic ribonucleoside-triphosphate reductase 634854 1041333 MYPE4960 Mycoplasma penetrans HF-2 anaerobic ribonucleoside-triphosphate reductase NP_757882.1 632713 D 272633 CDS NP_757883.1 26553949 1041334 634856..635365 1 NC_004432.1 anaerobic ribonucleoside-triphosphate reductase activating protein NrdG 635365 1041334 MYPE4970 Mycoplasma penetrans HF-2 anaerobic ribonucleoside-triphosphate reductase activating protein NrdG NP_757883.1 634856 D 272633 CDS NP_757884.1 26553950 1041335 635414..637357 1 NC_004432.1 similar to HMW1 of Mycoplasma pneumoniae, Pfam ELK domain Accession number PF03789; hypothetical protein 637357 1041335 MYPE4980 Mycoplasma penetrans HF-2 hypothetical protein NP_757884.1 635414 D 272633 CDS NP_757885.1 26553951 1041336 637864..638289 1 NC_004432.1 paralog family; hypothetical protein 638289 1041336 MYPE4990 Mycoplasma penetrans HF-2 hypothetical protein NP_757885.1 637864 D 272633 CDS NP_757886.1 26553952 1041337 638325..638585 1 NC_004432.1 MYPE 4990 paralog; hypothetical protein 638585 1041337 MYPE5000 Mycoplasma penetrans HF-2 hypothetical protein NP_757886.1 638325 D 272633 CDS NP_757887.1 26553953 1041339 complement(638675..639730) 1 NC_004432.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 639730 1041339 MYPE5010 Mycoplasma penetrans HF-2 coproporphyrinogen III oxidase NP_757887.1 638675 R 272633 CDS NP_757888.1 26553954 1041340 complement(639717..640616) 1 NC_004432.1 tRNA-isopentenyl pyrophosphate transferase 640616 1041340 MYPE5020 Mycoplasma penetrans HF-2 tRNA-isopentenyl pyrophosphate transferase NP_757888.1 639717 R 272633 CDS NP_757889.1 26553955 1041341 complement(640803..641777) 1 NC_004432.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 641777 eutD 1041341 eutD Mycoplasma penetrans HF-2 phosphotransacetylase NP_757889.1 640803 R 272633 CDS NP_757890.1 26553956 1041342 complement(641788..642438) 1 NC_004432.1 hypothetical protein 642438 1041342 MYPE5040 Mycoplasma penetrans HF-2 hypothetical protein NP_757890.1 641788 R 272633 CDS NP_757891.1 26553957 1041344 642888..644369 1 NC_004432.1 BglG family transcription antiterminator 644369 1041344 MYPE5050 Mycoplasma penetrans HF-2 BglG family transcription antiterminator NP_757891.1 642888 D 272633 CDS NP_757892.1 26553958 1041346 644594..645859 1 NC_004432.1 hypothetical protein 645859 1041346 MYPE5060 Mycoplasma penetrans HF-2 hypothetical protein NP_757892.1 644594 D 272633 CDS NP_757893.1 26553959 1041347 complement(645931..646725) 1 NC_004432.1 hypothetical protein 646725 1041347 MYPE5070 Mycoplasma penetrans HF-2 hypothetical protein NP_757893.1 645931 R 272633 CDS NP_757894.1 26553960 1041349 646995..648074 1 NC_004432.1 pyruvate dehydrogenase E1 component subunit alpha 648074 1041349 MYPE5080 Mycoplasma penetrans HF-2 pyruvate dehydrogenase E1 component subunit alpha NP_757894.1 646995 D 272633 CDS NP_757895.1 26553961 1041351 648074..649075 1 NC_004432.1 pyruvate dehydrogenase E1 component subunit beta 649075 1041351 MYPE5090 Mycoplasma penetrans HF-2 pyruvate dehydrogenase E1 component subunit beta NP_757895.1 648074 D 272633 CDS NP_757896.1 26553962 1041352 649128..650564 1 NC_004432.1 branched-chain alpha-keto acid dehydrogenase subunit E2 650564 1041352 MYPE5100 Mycoplasma penetrans HF-2 branched-chain alpha-keto acid dehydrogenase subunit E2 NP_757896.1 649128 D 272633 CDS NP_757897.1 26553963 1041353 650595..651986 1 NC_004432.1 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase E3 component 651986 1041353 MYPE5110 Mycoplasma penetrans HF-2 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase E3 component NP_757897.1 650595 D 272633 CDS NP_757898.1 26553964 1041354 652172..652666 1 NC_004432.1 gluthatione peroxidase 652666 1041354 MYPE5120 Mycoplasma penetrans HF-2 gluthatione peroxidase NP_757898.1 652172 D 272633 CDS NP_757899.1 26553965 1041355 complement(653078..654109) 1 NC_004432.1 oxidoreductase 654109 1041355 MYPE5130 Mycoplasma penetrans HF-2 oxidoreductase NP_757899.1 653078 R 272633 CDS NP_757900.1 26553966 1041356 complement(654228..654803) 1 NC_004432.1 AcrR family transcriptional regulator 654803 1041356 MYPE5140 Mycoplasma penetrans HF-2 AcrR family transcriptional regulator NP_757900.1 654228 R 272633 CDS NP_757901.1 26553967 1041358 654895..655995 1 NC_004432.1 hypothetical protein 655995 1041358 MYPE5150 Mycoplasma penetrans HF-2 hypothetical protein NP_757901.1 654895 D 272633 CDS NP_757902.1 26553968 1041360 656178..657749 1 NC_004432.1 hypothetical protein 657749 1041360 MYPE5160 Mycoplasma penetrans HF-2 hypothetical protein NP_757902.1 656178 D 272633 CDS NP_757903.1 26553969 1041361 657867..659516 1 NC_004432.1 amino acid permease 659516 1041361 MYPE5170 Mycoplasma penetrans HF-2 amino acid permease NP_757903.1 657867 D 272633 CDS NP_757904.1 26553970 1041363 complement(659570..660043) 1 NC_004432.1 hypothetical protein 660043 1041363 MYPE5180 Mycoplasma penetrans HF-2 hypothetical protein NP_757904.1 659570 R 272633 CDS NP_757905.1 26553971 1041364 complement(660052..660870) 1 NC_004432.1 haloacid dehalogenase-like hydrolase 660870 1041364 MYPE5190 Mycoplasma penetrans HF-2 haloacid dehalogenase-like hydrolase NP_757905.1 660052 R 272633 CDS NP_757906.1 26553972 1041365 661025..662074 1 NC_004432.1 catalyzes the reversible adenylation of nicotinate mononucleotide to nicotinic acid adenine dinucleotide; nicotinate-nucleotide adenylyltransferase 662074 nadD 1041365 nadD Mycoplasma penetrans HF-2 nicotinate-nucleotide adenylyltransferase NP_757906.1 661025 D 272633 CDS NP_757907.1 26553973 1041366 662086..662772 1 NC_004432.1 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 662772 1041366 MYPE5210 Mycoplasma penetrans HF-2 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase NP_757907.1 662086 D 272633 CDS NP_757908.1 26553974 1041367 complement(662834..664165) 1 NC_004432.1 hypothetical protein 664165 1041367 MYPE5220 Mycoplasma penetrans HF-2 hypothetical protein NP_757908.1 662834 R 272633 CDS NP_757909.1 26553975 1041368 664643..665731 1 NC_004432.1 NADP-dependent alcohol dehydrogenase 665731 1041368 MYPE5230 Mycoplasma penetrans HF-2 NADP-dependent alcohol dehydrogenase NP_757909.1 664643 D 272633 CDS NP_757910.1 26553976 1041369 complement(665788..666390) 1 NC_004432.1 xanthosine triphosphate pyrophosphatase 666390 1041369 MYPE5240 Mycoplasma penetrans HF-2 xanthosine triphosphate pyrophosphatase NP_757910.1 665788 R 272633 CDS NP_757911.1 26553977 1041370 complement(666500..666865) 1 NC_004432.1 hypothetical protein 666865 1041370 MYPE5250 Mycoplasma penetrans HF-2 hypothetical protein NP_757911.1 666500 R 272633 CDS NP_757912.1 26553978 1041371 complement(666988..668361) 1 NC_004432.1 MYPE4230 paralog; hypothetical protein 668361 1041371 MYPE5260 Mycoplasma penetrans HF-2 hypothetical protein NP_757912.1 666988 R 272633 CDS NP_757913.1 26553979 1041372 complement(668557..669318) 1 NC_004432.1 hypothetical protein 669318 1041372 MYPE5270 Mycoplasma penetrans HF-2 hypothetical protein NP_757913.1 668557 R 272633 CDS NP_757914.1 26553980 1041373 complement(669428..671569) 1 NC_004432.1 ppGpp 3'-pyrophosphohydrolase 671569 1041373 MYPE5280 Mycoplasma penetrans HF-2 ppGpp 3'-pyrophosphohydrolase NP_757914.1 669428 R 272633 CDS NP_757915.1 26553981 1041375 671800..673689 1 NC_004432.1 hypothetical protein 673689 1041375 MYPE5290 Mycoplasma penetrans HF-2 hypothetical protein NP_757915.1 671800 D 272633 CDS NP_757916.1 26553982 1041376 673823..674575 1 NC_004432.1 paralog family; hypothetical protein 674575 1041376 MYPE5300 Mycoplasma penetrans HF-2 hypothetical protein NP_757916.1 673823 D 272633 CDS NP_757917.1 26553983 1041377 complement(674658..675275) 1 NC_004432.1 hypothetical protein 675275 1041377 MYPE5310 Mycoplasma penetrans HF-2 hypothetical protein NP_757917.1 674658 R 272633 CDS NP_757918.1 26553984 1041379 675536..676063 1 NC_004432.1 hypothetical protein 676063 1041379 MYPE5330 Mycoplasma penetrans HF-2 hypothetical protein NP_757918.1 675536 D 272633 CDS NP_757919.1 26553985 1041380 complement(676182..676820) 1 NC_004432.1 hypothetical protein 676820 1041380 MYPE5340 Mycoplasma penetrans HF-2 hypothetical protein NP_757919.1 676182 R 272633 CDS NP_757920.1 26553986 1041381 677235..678251 1 NC_004432.1 IS1630-like transposase 678251 1041381 MYPE5350 Mycoplasma penetrans HF-2 IS1630-like transposase NP_757920.1 677235 D 272633 CDS NP_757921.1 26553987 1041383 complement(678565..679449) 1 NC_004432.1 hypothetical protein 679449 1041383 MYPE5360 Mycoplasma penetrans HF-2 hypothetical protein NP_757921.1 678565 R 272633 CDS NP_757922.1 26553988 1041384 complement(679713..680015) 1 NC_004432.1 hypothetical protein 680015 1041384 MYPE5370 Mycoplasma penetrans HF-2 hypothetical protein NP_757922.1 679713 R 272633 CDS NP_757923.1 26553989 1041385 680107..680400 1 NC_004432.1 hypothetical protein 680400 1041385 MYPE5380 Mycoplasma penetrans HF-2 hypothetical protein NP_757923.1 680107 D 272633 CDS NP_757924.1 26553990 1041387 680663..681373 1 NC_004432.1 hypothetical protein 681373 1041387 MYPE5390 Mycoplasma penetrans HF-2 hypothetical protein NP_757924.1 680663 D 272633 CDS NP_757925.1 26553991 1041388 complement(681538..682554) 1 NC_004432.1 IS1630-like transposase 682554 1041388 MYPE5400 Mycoplasma penetrans HF-2 IS1630-like transposase NP_757925.1 681538 R 272633 CDS NP_757926.1 26553992 1041389 complement(683254..684810) 1 NC_004432.1 IS1202-like transposase 684810 1041389 MYPE5410 Mycoplasma penetrans HF-2 IS1202-like transposase NP_757926.1 683254 R 272633 CDS NP_757927.1 26553993 1041390 685162..685602 1 NC_004432.1 hypothetical protein 685602 1041390 MYPE5420 Mycoplasma penetrans HF-2 hypothetical protein NP_757927.1 685162 D 272633 CDS NP_757928.1 26553994 1041391 685866..686537 1 NC_004432.1 MYPE5300 paralog; hypothetical protein 686537 1041391 MYPE5430 Mycoplasma penetrans HF-2 hypothetical protein NP_757928.1 685866 D 272633 CDS NP_757929.1 26553995 1041392 complement(686657..688066) 1 NC_004432.1 hypothetical protein 688066 1041392 MYPE5440 Mycoplasma penetrans HF-2 hypothetical protein NP_757929.1 686657 R 272633 CDS NP_757930.1 26553996 1041393 complement(688322..688519) 1 NC_004432.1 hypothetical protein 688519 1041393 MYPE5445 Mycoplasma penetrans HF-2 hypothetical protein NP_757930.1 688322 R 272633 CDS NP_757931.1 26553997 1041394 complement(688883..690622) 1 NC_004432.1 ptsI; PTS system enzyme I 690622 1041394 MYPE5450 Mycoplasma penetrans HF-2 PTS system enzyme I NP_757931.1 688883 R 272633 CDS NP_757932.1 26553998 1041396 complement(690654..691598) 1 NC_004432.1 lipase/esterase 691598 1041396 MYPE5460 Mycoplasma penetrans HF-2 lipase/esterase NP_757932.1 690654 R 272633 CDS NP_757933.1 26553999 1041397 complement(691782..695999) 1 NC_004432.1 translocase 695999 1041397 MYPE5470 Mycoplasma penetrans HF-2 translocase NP_757933.1 691782 R 272633 CDS NP_757934.1 26554000 1041398 696629..697702 1 NC_004432.1 transposase for IS232-like insertion sequence element 697702 1041398 MYPE5490 Mycoplasma penetrans HF-2 transposase for IS232-like insertion sequence element NP_757934.1 696629 D 272633 CDS NP_757935.1 26554001 1041399 697704..698465 1 NC_004432.1 IS232 ATP-binding protein IstB 698465 1041399 MYPE5500 Mycoplasma penetrans HF-2 IS232 ATP-binding protein IstB NP_757935.1 697704 D 272633 CDS NP_757936.1 26554002 1041401 698899..699132 1 NC_004432.1 hypothetical protein 699132 1041401 MYPE5505 Mycoplasma penetrans HF-2 hypothetical protein NP_757936.1 698899 D 272633 CDS NP_757937.1 26554003 1041402 complement(699666..700190) 1 NC_004432.1 hypothetical protein 700190 1041402 MYPE5510 Mycoplasma penetrans HF-2 hypothetical protein NP_757937.1 699666 R 272633 CDS NP_757938.1 26554004 1041405 complement(700280..702856) 1 NC_004432.1 oligopeptide transport ATP-binding protein OppF 702856 1041405 MYPE5520 Mycoplasma penetrans HF-2 oligopeptide transport ATP-binding protein OppF NP_757938.1 700280 R 272633 CDS NP_757939.1 26554005 1041409 complement(702868..704088) 1 NC_004432.1 oligopeptide transport ATP-binding protein OppD 704088 1041409 MYPE5530 Mycoplasma penetrans HF-2 oligopeptide transport ATP-binding protein OppD NP_757939.1 702868 R 272633 CDS NP_757940.1 26554006 1041410 complement(704091..705323) 1 NC_004432.1 oligopeptide transport system permease protein OppC 705323 1041410 MYPE5540 Mycoplasma penetrans HF-2 oligopeptide transport system permease protein OppC NP_757940.1 704091 R 272633 CDS NP_757941.1 26554007 1041413 complement(705316..706596) 1 NC_004432.1 oligopeptide transport system permease protein OppB 706596 1041413 MYPE5550 Mycoplasma penetrans HF-2 oligopeptide transport system permease protein OppB NP_757941.1 705316 R 272633 CDS NP_757942.1 26554008 1041419 complement(706606..709149) 1 NC_004432.1 hypothetical protein 709149 1041419 MYPE5560 Mycoplasma penetrans HF-2 hypothetical protein NP_757942.1 706606 R 272633 CDS NP_757943.1 26554009 1041420 complement(709425..710750) 1 NC_004432.1 MYPE3080 paralog; glutamine transport ATP-binding protein 710750 1041420 MYPE5570 Mycoplasma penetrans HF-2 glutamine transport ATP-binding protein NP_757943.1 709425 R 272633 CDS NP_757944.1 26554010 1041422 complement(710797..713286) 1 NC_004432.1 hypothetical protein 713286 1041422 MYPE5580 Mycoplasma penetrans HF-2 hypothetical protein NP_757944.1 710797 R 272633 CDS NP_757945.1 26554011 1041424 complement(713279..714826) 1 NC_004432.1 hypothetical protein 714826 1041424 MYPE5590 Mycoplasma penetrans HF-2 hypothetical protein NP_757945.1 713279 R 272633 CDS NP_757946.1 26554012 1041426 complement(714798..715439) 1 NC_004432.1 methylase 715439 1041426 MYPE5600 Mycoplasma penetrans HF-2 methylase NP_757946.1 714798 R 272633 CDS NP_757947.1 26554013 1041427 716095..716577 1 NC_004432.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 716577 1041427 MYPE5610 Mycoplasma penetrans HF-2 methionine sulfoxide reductase A NP_757947.1 716095 D 272633 CDS NP_757948.1 26554014 1041429 complement(716685..717482) 1 NC_004432.1 protein phosphatase 717482 1041429 MYPE5620 Mycoplasma penetrans HF-2 protein phosphatase NP_757948.1 716685 R 272633 CDS NP_757949.1 26554015 1041430 complement(717469..718527) 1 NC_004432.1 ortholog of YloN of Bacillus subtilis; hypothetical protein 718527 1041430 MYPE5630 Mycoplasma penetrans HF-2 hypothetical protein NP_757949.1 717469 R 272633 CDS NP_757950.1 26554016 1041431 complement(718527..719117) 1 NC_004432.1 guanylate kinase 719117 1041431 MYPE5640 Mycoplasma penetrans HF-2 guanylate kinase NP_757950.1 718527 R 272633 CDS NP_757951.1 26554017 1041435 719197..719757 1 NC_004432.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 719757 def 1041435 def Mycoplasma penetrans HF-2 peptide deformylase NP_757951.1 719197 D 272633 CDS NP_757952.1 26554018 1041436 719924..720940 1 NC_004432.1 IS1630-like transposase 720940 1041436 MYPE5660 Mycoplasma penetrans HF-2 IS1630-like transposase NP_757952.1 719924 D 272633 CDS NP_757953.1 26554019 1041437 complement(721079..721435) 1 NC_004432.1 MYPE5680 paralog; hypothetical protein 721435 1041437 MYPE5670 Mycoplasma penetrans HF-2 hypothetical protein NP_757953.1 721079 R 272633 CDS NP_757954.1 26554020 1041438 complement(721637..722152) 1 NC_004432.1 paralog family; hypothetical protein 722152 1041438 MYPE5680 Mycoplasma penetrans HF-2 hypothetical protein NP_757954.1 721637 R 272633 CDS NP_757955.1 26554021 1041439 complement(722136..722378) 1 NC_004432.1 hypothetical protein 722378 1041439 MYPE5690 Mycoplasma penetrans HF-2 hypothetical protein NP_757955.1 722136 R 272633 CDS NP_757956.1 26554022 1041442 complement(722714..723904) 1 NC_004432.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 723904 1041442 MYPE5700 Mycoplasma penetrans HF-2 acetate kinase NP_757956.1 722714 R 272633 CDS NP_757957.1 26554023 1041443 724015..725703 1 NC_004432.1 IS1202-like transposase 725703 1041443 MYPE5710 Mycoplasma penetrans HF-2 IS1202-like transposase NP_757957.1 724015 D 272633 CDS NP_757958.1 26554024 1041444 725889..727304 1 NC_004432.1 IS1202-like transposase 727304 1041444 MYPE5720 Mycoplasma penetrans HF-2 IS1202-like transposase NP_757958.1 725889 D 272633 CDS NP_757959.1 26554025 1041445 complement(727527..727892) 1 NC_004432.1 ribosomal protein L7/L12 727892 1041445 MYPE5730 Mycoplasma penetrans HF-2 ribosomal protein L7/L12 NP_757959.1 727527 R 272633 CDS NP_757960.1 26554026 1041447 complement(727920..728477) 1 NC_004432.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 728477 rplJ 1041447 rplJ Mycoplasma penetrans HF-2 50S ribosomal protein L10 NP_757960.1 727920 R 272633 CDS NP_757961.1 26554027 1041448 complement(728692..729429) 1 NC_004432.1 glycerophosphoryl diester phosphodiesterase 729429 1041448 MYPE5750 Mycoplasma penetrans HF-2 glycerophosphoryl diester phosphodiesterase NP_757961.1 728692 R 272633 CDS NP_757962.1 26554028 1041449 complement(729422..730906) 1 NC_004432.1 permease 730906 1041449 MYPE5760 Mycoplasma penetrans HF-2 permease NP_757962.1 729422 R 272633 CDS NP_757963.1 26554029 1041450 complement(730911..731363) 1 NC_004432.1 hypothetical protein 731363 1041450 MYPE5770 Mycoplasma penetrans HF-2 hypothetical protein NP_757963.1 730911 R 272633 CDS NP_757964.1 26554030 1041451 complement(731733..732728) 1 NC_004432.1 hypothetical protein 732728 1041451 MYPE5780 Mycoplasma penetrans HF-2 hypothetical protein NP_757964.1 731733 R 272633 CDS NP_757965.1 26554031 1041452 complement(732760..733620) 1 NC_004432.1 hypothetical protein 733620 1041452 MYPE5790 Mycoplasma penetrans HF-2 hypothetical protein NP_757965.1 732760 R 272633 CDS NP_757966.1 26554032 1041453 complement(733653..734657) 1 NC_004432.1 ATPase AAA 734657 1041453 MYPE5800 Mycoplasma penetrans HF-2 ATPase AAA NP_757966.1 733653 R 272633 CDS NP_757967.1 26554033 1041454 complement(734799..735350) 1 NC_004432.1 hypoxanthine-guanine phosphoribosyltransferase 735350 1041454 MYPE5810 Mycoplasma penetrans HF-2 hypoxanthine-guanine phosphoribosyltransferase NP_757967.1 734799 R 272633 CDS NP_757968.1 26554034 1041455 complement(735350..736648) 1 NC_004432.1 adenylosuccinate lyase 736648 1041455 MYPE5820 Mycoplasma penetrans HF-2 adenylosuccinate lyase NP_757968.1 735350 R 272633 CDS NP_757969.1 26554035 1041456 complement(736658..737977) 1 NC_004432.1 adenylosuccinate synthetase 737977 1041456 MYPE5830 Mycoplasma penetrans HF-2 adenylosuccinate synthetase NP_757969.1 736658 R 272633 CDS NP_757970.1 26554036 1041457 complement(738045..738212) 1 NC_004432.1 hypothetical protein 738212 1041457 MYPE5840 Mycoplasma penetrans HF-2 hypothetical protein NP_757970.1 738045 R 272633 CDS NP_757971.1 26554037 1041459 complement(738267..739238) 1 NC_004432.1 phosphoesterase 739238 1041459 MYPE5850 Mycoplasma penetrans HF-2 phosphoesterase NP_757971.1 738267 R 272633 CDS NP_757972.1 26554038 1041460 complement(739245..740396) 1 NC_004432.1 thiamin biosynthesis protein 740396 1041460 MYPE5860 Mycoplasma penetrans HF-2 thiamin biosynthesis protein NP_757972.1 739245 R 272633 CDS NP_757973.1 26554039 1041463 complement(740575..741504) 1 NC_004432.1 sugar ABC transporter permease 741504 1041463 MYPE5870 Mycoplasma penetrans HF-2 sugar ABC transporter permease NP_757973.1 740575 R 272633 CDS NP_757974.1 26554040 1041464 complement(741504..743138) 1 NC_004432.1 sugar ABC transporter permease 743138 1041464 MYPE5880 Mycoplasma penetrans HF-2 sugar ABC transporter permease NP_757974.1 741504 R 272633 CDS NP_757975.1 26554041 1041465 complement(743138..745036) 1 NC_004432.1 sugar ABC transporter ATP-binding protein 745036 1041465 MYPE5890 Mycoplasma penetrans HF-2 sugar ABC transporter ATP-binding protein NP_757975.1 743138 R 272633 CDS NP_757976.1 26554042 1041466 complement(745002..746816) 1 NC_004432.1 lipoprotein 746816 1041466 MYPE5900 Mycoplasma penetrans HF-2 lipoprotein NP_757976.1 745002 R 272633 CDS NP_757977.1 26554043 1041467 complement(747077..749386) 1 NC_004432.1 PTS system enzyme IIABC component 749386 1041467 MYPE5910 Mycoplasma penetrans HF-2 PTS system enzyme IIABC component NP_757977.1 747077 R 272633 CDS NP_757978.1 26554044 1041468 complement(750031..750999) 1 NC_004432.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 750999 pfkA 1041468 pfkA Mycoplasma penetrans HF-2 6-phosphofructokinase NP_757978.1 750031 R 272633 CDS NP_757979.1 26554045 1041470 complement(751077..751673) 1 NC_004432.1 hypothetical protein 751673 1041470 MYPE5930 Mycoplasma penetrans HF-2 hypothetical protein NP_757979.1 751077 R 272633 CDS NP_757980.1 26554046 1041473 complement(751683..752252) 1 NC_004432.1 MerR family transcriptional regulator 752252 1041473 MYPE5940 Mycoplasma penetrans HF-2 MerR family transcriptional regulator NP_757980.1 751683 R 272633 CDS NP_757981.1 26554047 1041475 752638..754365 1 NC_004432.1 MYPE5960 paralog; hypothetical protein 754365 1041475 MYPE5950 Mycoplasma penetrans HF-2 hypothetical protein NP_757981.1 752638 D 272633 CDS NP_757982.1 26554048 1041476 754566..756707 1 NC_004432.1 paralog family; hypothetical protein 756707 1041476 MYPE5960 Mycoplasma penetrans HF-2 hypothetical protein NP_757982.1 754566 D 272633 CDS NP_757983.1 26554049 1041477 756800..757396 1 NC_004432.1 hypothetical protein 757396 1041477 MYPE5970 Mycoplasma penetrans HF-2 hypothetical protein NP_757983.1 756800 D 272633 CDS NP_757984.1 26554050 1041478 757404..758852 1 NC_004432.1 MYPE5960 paralog; hypothetical protein 758852 1041478 MYPE5980 Mycoplasma penetrans HF-2 hypothetical protein NP_757984.1 757404 D 272633 CDS NP_757985.1 26554051 1041479 complement(758954..761509) 1 NC_004432.1 lipase 761509 1041479 MYPE5990 Mycoplasma penetrans HF-2 lipase NP_757985.1 758954 R 272633 CDS NP_757986.1 26554052 1041480 complement(761573..761800) 1 NC_004432.1 hypothetical protein 761800 1041480 MYPE6000 Mycoplasma penetrans HF-2 hypothetical protein NP_757986.1 761573 R 272633 CDS NP_757987.1 26554053 1041481 complement(761815..763527) 1 NC_004432.1 lipase 763527 1041481 MYPE6010 Mycoplasma penetrans HF-2 lipase NP_757987.1 761815 R 272633 CDS NP_757988.1 26554054 1041482 complement(763511..765403) 1 NC_004432.1 hypothetical protein 765403 1041482 MYPE6020 Mycoplasma penetrans HF-2 hypothetical protein NP_757988.1 763511 R 272633 CDS NP_757989.1 26554055 1041483 complement(765413..768070) 1 NC_004432.1 lipase 768070 1041483 MYPE6030 Mycoplasma penetrans HF-2 lipase NP_757989.1 765413 R 272633 CDS NP_757990.1 26554056 1041484 complement(768384..768605) 1 NC_004432.1 hypothetical protein 768605 1041484 MYPE6040 Mycoplasma penetrans HF-2 hypothetical protein NP_757990.1 768384 R 272633 CDS NP_757991.1 26554057 1041485 complement(768615..770519) 1 NC_004432.1 hypothetical protein 770519 1041485 MYPE6050 Mycoplasma penetrans HF-2 hypothetical protein NP_757991.1 768615 R 272633 CDS NP_757992.1 26554058 1041486 complement(770657..773518) 1 NC_004432.1 paralog family, low similarity to 116 kDa surface antigen of Mycoplasma genitalium Expect=1.4e-09, Identities=22%; hypothetical protein 773518 1041486 MYPE6060 Mycoplasma penetrans HF-2 hypothetical protein NP_757992.1 770657 R 272633 CDS NP_757993.1 26554059 1041487 complement(773667..776519) 1 NC_004432.1 MYPE6060 paralog; hypothetical protein 776519 1041487 MYPE6070 Mycoplasma penetrans HF-2 hypothetical protein NP_757993.1 773667 R 272633 CDS NP_757994.1 26554060 1041488 776690..778048 1 NC_004432.1 arginine deiminase 778048 1041488 MYPE6080 Mycoplasma penetrans HF-2 arginine deiminase NP_757994.1 776690 D 272633 CDS NP_757995.1 26554061 1041489 778069..779097 1 NC_004432.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 779097 1041489 MYPE6090 Mycoplasma penetrans HF-2 ornithine carbamoyltransferase NP_757995.1 778069 D 272633 CDS NP_757996.1 26554062 1041491 779123..780052 1 NC_004432.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 780052 1041491 MYPE6100 Mycoplasma penetrans HF-2 carbamate kinase NP_757996.1 779123 D 272633 CDS NP_757997.1 26554063 1041492 780077..781780 1 NC_004432.1 amino acid permease 781780 1041492 MYPE6110 Mycoplasma penetrans HF-2 amino acid permease NP_757997.1 780077 D 272633 CDS NP_757998.1 26554064 1041494 781997..783691 1 NC_004432.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 783691 argS 1041494 argS Mycoplasma penetrans HF-2 arginyl-tRNA synthetase NP_757998.1 781997 D 272633 CDS NP_757999.1 26554065 1041495 complement(784352..789808) 1 NC_004432.1 MYPE890 paralog; permease 789808 1041495 MYPE6130 Mycoplasma penetrans HF-2 permease NP_757999.1 784352 R 272633 CDS NP_758000.1 26554066 1041496 complement(790072..790389) 1 NC_004432.1 hypothetical protein 790389 1041496 MYPE6140 Mycoplasma penetrans HF-2 hypothetical protein NP_758000.1 790072 R 272633 CDS NP_758001.1 26554067 1041497 complement(790534..790731) 1 NC_004432.1 hypothetical protein 790731 1041497 MYPE6155 Mycoplasma penetrans HF-2 hypothetical protein NP_758001.1 790534 R 272633 CDS NP_758002.1 26554068 1041498 complement(790872..791042) 1 NC_004432.1 hypothetical protein 791042 1041498 MYPE6160 Mycoplasma penetrans HF-2 hypothetical protein NP_758002.1 790872 R 272633 CDS NP_758003.1 26554069 1041499 complement(791731..791955) 1 NC_004432.1 hypothetical protein 791955 1041499 MYPE6175 Mycoplasma penetrans HF-2 hypothetical protein NP_758003.1 791731 R 272633 CDS NP_758004.1 26554070 1041500 792364..792909 1 NC_004432.1 hypothetical protein 792909 1041500 MYPE6180 Mycoplasma penetrans HF-2 hypothetical protein NP_758004.1 792364 D 272633 CDS NP_758005.1 26554071 1041501 793022..793309 1 NC_004432.1 hypothetical protein 793309 1041501 MYPE6190 Mycoplasma penetrans HF-2 hypothetical protein NP_758005.1 793022 D 272633 CDS NP_758006.1 26554072 1041502 793695..794237 1 NC_004432.1 MYPE6410 paralog; hypothetical protein 794237 1041502 MYPE6200 Mycoplasma penetrans HF-2 hypothetical protein NP_758006.1 793695 D 272633 CDS NP_758007.1 26554073 1041503 complement(794425..795603) 1 NC_004432.1 NADH-dependent butanol dehydrogenase 795603 1041503 MYPE6210 Mycoplasma penetrans HF-2 NADH-dependent butanol dehydrogenase NP_758007.1 794425 R 272633 CDS NP_758008.1 26554074 1041504 795885..796046 1 NC_004432.1 hypothetical protein 796046 1041504 MYPE6220 Mycoplasma penetrans HF-2 hypothetical protein NP_758008.1 795885 D 272633 CDS NP_758009.1 26554075 1041505 796194..797627 1 NC_004432.1 hypothetical protein 797627 1041505 MYPE6230 Mycoplasma penetrans HF-2 hypothetical protein NP_758009.1 796194 D 272633 CDS NP_758010.1 26554076 1041507 798211..798891 1 NC_004432.1 alpha-acetolactate decarboxylase 798891 1041507 MYPE6240 Mycoplasma penetrans HF-2 alpha-acetolactate decarboxylase NP_758010.1 798211 D 272633 CDS NP_758011.1 26554077 1041512 799425..799679 1 NC_004432.1 3-ketoacyl-ACP reductase 799679 1041512 MYPE6250 Mycoplasma penetrans HF-2 3-ketoacyl-ACP reductase NP_758011.1 799425 D 272633 CDS NP_758012.1 26554078 1041517 complement(800167..801246) 1 NC_004432.1 formate/ nitrite transporter 801246 1041517 MYPE6260 Mycoplasma penetrans HF-2 formate/ nitrite transporter NP_758012.1 800167 R 272633 CDS NP_758013.1 26554079 1041518 801422..802168 1 NC_004432.1 hypothetical protein 802168 1041518 MYPE6270 Mycoplasma penetrans HF-2 hypothetical protein NP_758013.1 801422 D 272633 CDS NP_758014.1 26554080 1041535 complement(802271..802441) 1 NC_004432.1 hypothetical protein 802441 1041535 MYPE6275 Mycoplasma penetrans HF-2 hypothetical protein NP_758014.1 802271 R 272633 CDS NP_758015.1 26554081 1041536 802979..803803 1 NC_004432.1 hypothetical protein 803803 1041536 MYPE6280 Mycoplasma penetrans HF-2 hypothetical protein NP_758015.1 802979 D 272633 CDS NP_758016.1 26554082 1041549 804088..805500 1 NC_004432.1 transposase for IS232-like insertion sequence element 805500 1041549 MYPE6290 Mycoplasma penetrans HF-2 transposase for IS232-like insertion sequence element NP_758016.1 804088 D 272633 CDS NP_758017.1 26554083 1041557 805502..806263 1 NC_004432.1 IS232 ATP-binding protein IstB 806263 1041557 MYPE6300 Mycoplasma penetrans HF-2 IS232 ATP-binding protein IstB NP_758017.1 805502 D 272633 CDS NP_758018.1 26554084 1041558 806513..807235 1 NC_004432.1 hypothetical protein 807235 1041558 MYPE6310 Mycoplasma penetrans HF-2 hypothetical protein NP_758018.1 806513 D 272633 CDS NP_758019.1 26554085 1041559 complement(807241..809568) 1 NC_004432.1 hypothetical protein 809568 1041559 MYPE6320 Mycoplasma penetrans HF-2 hypothetical protein NP_758019.1 807241 R 272633 CDS NP_758020.1 26554086 1041560 complement(809552..811384) 1 NC_004432.1 hypothetical protein 811384 1041560 MYPE6330 Mycoplasma penetrans HF-2 hypothetical protein NP_758020.1 809552 R 272633 CDS NP_758021.1 26554087 1041561 complement(811418..813085) 1 NC_004432.1 glycosyl transferase 813085 1041561 MYPE6340 Mycoplasma penetrans HF-2 glycosyl transferase NP_758021.1 811418 R 272633 CDS NP_758022.1 26554088 1041562 complement(813209..814732) 1 NC_004432.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 814732 glpK 1041562 glpK Mycoplasma penetrans HF-2 glycerol kinase NP_758022.1 813209 R 272633 CDS NP_758023.1 26554089 1041564 complement(814757..815902) 1 NC_004432.1 glycerol-3-phosphate dehydrogenase 815902 1041564 MYPE6370 Mycoplasma penetrans HF-2 glycerol-3-phosphate dehydrogenase NP_758023.1 814757 R 272633 CDS NP_758024.1 26554090 1041568 complement(815954..816772) 1 NC_004432.1 glycerol uptake facilitator protein 816772 1041568 MYPE6380 Mycoplasma penetrans HF-2 glycerol uptake facilitator protein NP_758024.1 815954 R 272633 CDS NP_758025.1 26554091 1041570 complement(817045..818034) 1 NC_004432.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 818034 recA 1041570 recA Mycoplasma penetrans HF-2 recombinase A NP_758025.1 817045 R 272633 CDS NP_758026.1 26554092 1040515 complement(818098..818595) 1 NC_004432.1 competence-damage inducible protein CinA 818595 1040515 MYPE6400 Mycoplasma penetrans HF-2 competence-damage inducible protein CinA NP_758026.1 818098 R 272633 CDS NP_758027.1 26554093 1041041 complement(819003..819542) 1 NC_004432.1 hypothetical protein 819542 1041041 MYPE6410 Mycoplasma penetrans HF-2 hypothetical protein NP_758027.1 819003 R 272633 CDS NP_758028.1 26554094 1040909 819915..820442 1 NC_004432.1 NADPH oxidoreductase 820442 1040909 MYPE6420 Mycoplasma penetrans HF-2 NADPH oxidoreductase NP_758028.1 819915 D 272633 CDS NP_758029.1 26554095 1040578 820624..821352 1 NC_004432.1 NADPH flavin oxidoreductase 821352 1040578 MYPE6430 Mycoplasma penetrans HF-2 NADPH flavin oxidoreductase NP_758029.1 820624 D 272633 CDS NP_758030.1 26554096 1040624 complement(821354..822439) 1 NC_004432.1 ATP/GTP-binding protein 822439 1040624 MYPE6440 Mycoplasma penetrans HF-2 ATP/GTP-binding protein NP_758030.1 821354 R 272633 CDS NP_758031.1 26554097 1041047 complement(822420..823019) 1 NC_004432.1 hypothetical protein 823019 1041047 MYPE6450 Mycoplasma penetrans HF-2 hypothetical protein NP_758031.1 822420 R 272633 CDS NP_758032.1 26554098 1041049 complement(823023..823964) 1 NC_004432.1 hypothetical protein 823964 1041049 MYPE6460 Mycoplasma penetrans HF-2 hypothetical protein NP_758032.1 823023 R 272633 CDS NP_758033.1 26554099 1040591 complement(823988..828433) 1 NC_004432.1 DNA topoisomerase IV subunit A 828433 1040591 MYPE6470 Mycoplasma penetrans HF-2 DNA topoisomerase IV subunit A NP_758033.1 823988 R 272633 CDS NP_758034.1 26554100 1041035 complement(828439..830334) 1 NC_004432.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 830334 1041035 MYPE6480 Mycoplasma penetrans HF-2 DNA topoisomerase IV subunit B NP_758034.1 828439 R 272633 CDS NP_758035.1 26554101 1040566 complement(831015..832199) 1 NC_004432.1 P35 lipoprotein 832199 1040566 MYPE6490 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758035.1 831015 R 272633 CDS NP_758036.1 26554102 1041043 complement(832494..832703) 1 NC_004432.1 MYPE6495 and MYPE6500 are predicted as the same gene with a frameshift; P35 lipoprotein 832703 1041043 MYPE6495 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758036.1 832494 R 272633 CDS NP_758037.1 26554103 1041037 complement(832669..833658) 1 NC_004432.1 MYPE6495 and MYPE6500 are predicted as the same gene with a frameshift; P35 lipoprotein 833658 1041037 MYPE6500 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758037.1 832669 R 272633 CDS NP_758038.1 26554104 1041034 complement(833955..835139) 1 NC_004432.1 P35 lipoprotein 835139 1041034 MYPE6510 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758038.1 833955 R 272633 CDS NP_758039.1 26554105 1041050 complement(835456..835935) 1 NC_004432.1 MYPE6520 and MYPE6525 are predicted as the same gene with a frameshift; P35 lipoprotein 835935 1041050 MYPE6525 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758039.1 835456 R 272633 CDS NP_758040.1 26554106 1040573 complement(836106..836645) 1 NC_004432.1 MYPE6520 and MYPE6525 are predicted as the same gene with a frameshift; P35 lipoprotein 836645 1040573 MYPE6520 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758040.1 836106 R 272633 CDS NP_758041.1 26554107 1040571 complement(836957..838117) 1 NC_004432.1 P35 lipoprotein 838117 1040571 MYPE6530 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758041.1 836957 R 272633 CDS NP_758042.1 26554108 1041571 complement(838407..839543) 1 NC_004432.1 P35 lipoprotein 839543 1041571 MYPE6540 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758042.1 838407 R 272633 CDS NP_758043.1 26554109 1040592 complement(839924..840985) 1 NC_004432.1 P35 lipoprotein 840985 1040592 MYPE6550 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758043.1 839924 R 272633 CDS NP_758044.1 26554110 1040572 complement(841270..842445) 1 NC_004432.1 P35 lipoprotein 842445 1040572 MYPE6560 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758044.1 841270 R 272633 CDS NP_758045.1 26554111 1040546 complement(842735..843859) 1 NC_004432.1 P35 lipoprotein 843859 1040546 MYPE6570 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758045.1 842735 R 272633 CDS NP_758046.1 26554112 1040569 complement(844164..845363) 1 NC_004432.1 P35 lipoprotein 845363 1040569 MYPE6580 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758046.1 844164 R 272633 CDS NP_758047.1 26554113 1041048 complement(845665..846762) 1 NC_004432.1 P35 lipoprotein 846762 1041048 MYPE6590 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758047.1 845665 R 272633 CDS NP_758048.1 26554114 1040576 complement(847002..848744) 1 NC_004432.1 similar to P69 of Mycoplasma hyorhinis Expect=3.3e-80, Identities=33%; transport system permease 848744 1040576 MYPE6600 Mycoplasma penetrans HF-2 transport system permease NP_758048.1 847002 R 272633 CDS NP_758049.1 26554115 1041044 complement(848734..849471) 1 NC_004432.1 MYPE3080 paralog; ABC transporter ATP-binding protein 849471 1041044 MYPE6610 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_758049.1 848734 R 272633 CDS NP_758050.1 26554116 1040622 complement(849464..850672) 1 NC_004432.1 similar to P37 of Mycoplasma hyorhinis Expect=4.3e-54, Identities=35%; high affinity transport system protein 850672 1040622 MYPE6620 Mycoplasma penetrans HF-2 high affinity transport system protein NP_758050.1 849464 R 272633 CDS NP_758051.1 26554117 1041054 complement(850970..852142) 1 NC_004432.1 P35 lipoprotein homolog reported as lipoprotein IMP13 852142 1041054 MYPE6630 Mycoplasma penetrans HF-2 P35 lipoprotein homolog reported as lipoprotein IMP13 NP_758051.1 850970 R 272633 CDS NP_758052.1 26554118 1041046 complement(852586..853752) 1 NC_004432.1 P35 lipoprotein 853752 1041046 MYPE6640 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758052.1 852586 R 272633 CDS NP_758053.1 26554119 1040550 complement(854049..855209) 1 NC_004432.1 P35 lipoprotein 855209 1040550 MYPE6650 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758053.1 854049 R 272633 CDS NP_758054.1 26554120 1041051 complement(855889..857058) 1 NC_004432.1 P35 lipoprotein 857058 1041051 MYPE6660 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758054.1 855889 R 272633 CDS NP_758055.1 26554121 1041039 complement(857352..858488) 1 NC_004432.1 P35 lipoprotein 858488 1041039 MYPE6670 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758055.1 857352 R 272633 CDS NP_758056.1 26554122 1041055 complement(858786..859937) 1 NC_004432.1 P35 lipoprotein 859937 1041055 MYPE6680 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758056.1 858786 R 272633 CDS NP_758057.1 26554123 1040548 complement(860232..861398) 1 NC_004432.1 P35 lipoprotein 861398 1040548 MYPE6690 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758057.1 860232 R 272633 CDS NP_758058.1 26554124 1040575 complement(861753..862316) 1 NC_004432.1 hypothetical protein 862316 1040575 MYPE6700 Mycoplasma penetrans HF-2 hypothetical protein NP_758058.1 861753 R 272633 CDS NP_758059.1 26554125 1040621 complement(862483..863619) 1 NC_004432.1 P35 lipoprotein 863619 1040621 MYPE6710 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758059.1 862483 R 272633 CDS NP_758060.1 26554126 1041042 complement(863908..865074) 1 NC_004432.1 P35 lipoprotein 865074 1041042 MYPE6720 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758060.1 863908 R 272633 CDS NP_758061.1 26554127 1041052 complement(865362..866516) 1 NC_004432.1 P35 lipoprotein 866516 1041052 MYPE6730 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758061.1 865362 R 272633 CDS NP_758062.1 26554128 1040563 complement(866864..867925) 1 NC_004432.1 P35 lipoprotein 867925 1040563 MYPE6740 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758062.1 866864 R 272633 CDS NP_758063.1 26554129 1040537 complement(868230..869384) 1 NC_004432.1 P35 lipoprotein 869384 1040537 MYPE6750 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758063.1 868230 R 272633 CDS NP_758064.1 26554130 1040564 complement(869979..870434) 1 NC_004432.1 hypothetical protein 870434 1040564 MYPE6760 Mycoplasma penetrans HF-2 hypothetical protein NP_758064.1 869979 R 272633 CDS NP_758065.1 26554131 1041080 complement(870598..871077) 1 NC_004432.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 871077 1041080 MYPE6770 Mycoplasma penetrans HF-2 flavodoxin NP_758065.1 870598 R 272633 CDS NP_758066.1 26554132 1040549 complement(871412..872563) 1 NC_004432.1 P35 lipoprotein homolog reported as gene for P38 lipoprotein 872563 1040549 MYPE6780 Mycoplasma penetrans HF-2 P35 lipoprotein homolog reported as gene for P38 lipoprotein NP_758066.1 871412 R 272633 CDS NP_758067.1 26554133 1040580 complement(872868..874187) 1 NC_004432.1 P35 lipoprotein 874187 1040580 MYPE6790 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758067.1 872868 R 272633 CDS NP_758068.1 26554134 1041071 complement(874612..875742) 1 NC_004432.1 P35 lipoprotein homolog reported as gene for P33 lipoprotein 875742 1041071 MYPE6800 Mycoplasma penetrans HF-2 P35 lipoprotein homolog reported as gene for P33 lipoprotein NP_758068.1 874612 R 272633 CDS NP_758069.1 26554135 1040619 complement(876041..877129) 1 NC_004432.1 P35 lipoprotein 877129 1040619 MYPE6810 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758069.1 876041 R 272633 CDS NP_758070.1 26554136 1041068 complement(877416..878543) 1 NC_004432.1 P35 lipoprotein homolog reported as IMP14 878543 1041068 MYPE6820 Mycoplasma penetrans HF-2 P35 lipoprotein homolog reported as IMP14 NP_758070.1 877416 R 272633 CDS NP_758071.1 26554137 1040553 complement(878839..879924) 1 NC_004432.1 P35 lipoprotein 879924 1040553 MYPE6830 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758071.1 878839 R 272633 CDS NP_758072.1 26554138 1040554 complement(880225..881313) 1 NC_004432.1 P35 lipoprotein 881313 1040554 MYPE6840 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758072.1 880225 R 272633 CDS NP_758073.1 26554139 1040620 complement(881676..882512) 1 NC_004432.1 paralog family; lipoprotein 882512 1040620 MYPE6850 Mycoplasma penetrans HF-2 lipoprotein NP_758073.1 881676 R 272633 CDS NP_758074.1 26554140 1041053 complement(882695..883159) 1 NC_004432.1 dihyrofolate reductase 883159 1041053 MYPE6860 Mycoplasma penetrans HF-2 dihyrofolate reductase NP_758074.1 882695 R 272633 CDS NP_758075.1 26554141 1040542 complement(883159..884028) 1 NC_004432.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 884028 thyA 1040542 thyA Mycoplasma penetrans HF-2 thymidylate synthase NP_758075.1 883159 R 272633 CDS NP_758076.1 26554142 1040574 complement(884015..884863) 1 NC_004432.1 methylenetetrahydrofolate dehydrogenase 884863 1040574 MYPE6880 Mycoplasma penetrans HF-2 methylenetetrahydrofolate dehydrogenase NP_758076.1 884015 R 272633 CDS NP_758077.1 26554143 1040545 complement(885038..886675) 1 NC_004432.1 pyruvate decarboxylase 886675 1040545 MYPE6890 Mycoplasma penetrans HF-2 pyruvate decarboxylase NP_758077.1 885038 R 272633 CDS NP_758078.1 26554144 1040557 complement(886677..887837) 1 NC_004432.1 butanol dehydrogenas 887837 1040557 MYPE6900 Mycoplasma penetrans HF-2 butanol dehydrogenas NP_758078.1 886677 R 272633 CDS NP_758079.1 26554145 1041056 complement(888037..890382) 1 NC_004432.1 ATP-dependent protease La 890382 1041056 MYPE6910 Mycoplasma penetrans HF-2 ATP-dependent protease La NP_758079.1 888037 R 272633 CDS NP_758080.1 26554146 1040540 complement(890549..891886) 1 NC_004432.1 FKBP-type peptidylprolyl isomerase 891886 1040540 MYPE6920 Mycoplasma penetrans HF-2 FKBP-type peptidylprolyl isomerase NP_758080.1 890549 R 272633 CDS NP_758081.1 26554147 1040555 complement(892031..893620) 1 NC_004432.1 amino acid permease 893620 1040555 MYPE6930 Mycoplasma penetrans HF-2 amino acid permease NP_758081.1 892031 R 272633 CDS NP_758082.1 26554148 1041582 complement(893795..895126) 1 NC_004432.1 integrated membrane protein 895126 1041582 MYPE6940 Mycoplasma penetrans HF-2 integrated membrane protein NP_758082.1 893795 R 272633 CDS NP_758083.1 26554149 1040556 complement(895222..899115) 1 NC_004432.1 MYPE6970 paralog, similar to liporotein of Mycoplasma genitalium U39711; hypothetical protein 899115 1040556 MYPE6950 Mycoplasma penetrans HF-2 hypothetical protein NP_758083.1 895222 R 272633 CDS NP_758084.1 26554150 1041581 complement(899148..902945) 1 NC_004432.1 MYPE6970 paralog, similar to liporotein of Mycoplasma genitalium U39711; hypothetical protein 902945 1041581 MYPE6960 Mycoplasma penetrans HF-2 hypothetical protein NP_758084.1 899148 R 272633 CDS NP_758085.1 26554151 1040539 complement(902967..906821) 1 NC_004432.1 paralog family, similar to liporotein of Mycoplasma genitalium U39711; hypothetical protein 906821 1040539 MYPE6970 Mycoplasma penetrans HF-2 hypothetical protein NP_758085.1 902967 R 272633 CDS NP_758086.1 26554152 1040543 complement(906983..910906) 1 NC_004432.1 MYPE6970 paralog, similar to liporotein of Mycoplasma genitalium U39711; hypothetical protein 910906 1040543 MYPE6980 Mycoplasma penetrans HF-2 hypothetical protein NP_758086.1 906983 R 272633 CDS NP_758087.1 26554153 1040712 complement(910938..914219) 1 NC_004432.1 MYPE6970 paralog, similar to liporotein of Mycoplasma genitalium U39711; hypothetical protein 914219 1040712 MYPE6990 Mycoplasma penetrans HF-2 hypothetical protein NP_758087.1 910938 R 272633 CDS NP_758088.1 26554154 1040618 complement(914220..914684) 1 NC_004432.1 MYPE6970 paralog truncated; hypothetical protein 914684 1040618 MYPE7000 Mycoplasma penetrans HF-2 hypothetical protein NP_758088.1 914220 R 272633 CDS NP_758089.1 26554155 1041032 complement(914706..918569) 1 NC_004432.1 MYPE6970 paralog, similar to liporotein of Mycoplasma genitalium U39711; hypothetical protein 918569 1041032 MYPE7010 Mycoplasma penetrans HF-2 hypothetical protein NP_758089.1 914706 R 272633 CDS NP_758090.1 26554156 1040562 complement(918826..920919) 1 NC_004432.1 signal-peptide-less P35 lipoprotein 920919 1040562 MYPE7020 Mycoplasma penetrans HF-2 signal-peptide-less P35 lipoprotein NP_758090.1 918826 R 272633 CDS NP_758091.1 26554157 1041070 complement(921310..922656) 1 NC_004432.1 MYPE7030 and MYPE7035 are predicted as the same gene with a frameshift; signal-peptide-less P35 lipoprotein 922656 1041070 MYPE7035 Mycoplasma penetrans HF-2 signal-peptide-less P35 lipoprotein NP_758091.1 921310 R 272633 CDS NP_758092.1 26554158 1040526 complement(922739..923353) 1 NC_004432.1 MYPE7030 and MYPE7035 are predicted as the same gene with a frameshift; signal-peptide-less P35 lipoprotein 923353 1040526 MYPE7030 Mycoplasma penetrans HF-2 signal-peptide-less P35 lipoprotein NP_758092.1 922739 R 272633 CDS NP_758093.1 26554159 1041127 complement(923612..925753) 1 NC_004432.1 signal-peptide-less P35 lipoprotein 925753 1041127 MYPE7040 Mycoplasma penetrans HF-2 signal-peptide-less P35 lipoprotein NP_758093.1 923612 R 272633 CDS NP_758094.1 26554160 1040530 complement(925987..928065) 1 NC_004432.1 signal-peptide-less P35 lipoprotein 928065 1040530 MYPE7050 Mycoplasma penetrans HF-2 signal-peptide-less P35 lipoprotein NP_758094.1 925987 R 272633 CDS NP_758095.1 26554161 1040541 complement(928473..929957) 1 NC_004432.1 signal-peptide-less P35 lipoprotein 929957 1040541 MYPE7060 Mycoplasma penetrans HF-2 signal-peptide-less P35 lipoprotein NP_758095.1 928473 R 272633 CDS NP_758096.1 26554162 1040633 complement(930370..932427) 1 NC_004432.1 signal-peptide-less P35 lipoprotein 932427 1040633 MYPE7070 Mycoplasma penetrans HF-2 signal-peptide-less P35 lipoprotein NP_758096.1 930370 R 272633 CDS NP_758097.1 26554163 1041031 complement(932816..933148) 1 NC_004432.1 MYPE7110 paralog; lipoprotein 933148 1041031 MYPE7080 Mycoplasma penetrans HF-2 lipoprotein NP_758097.1 932816 R 272633 CDS NP_758098.1 26554164 1040538 complement(933274..933642) 1 NC_004432.1 MYPE7110 paralog; lipoprotein 933642 1040538 MYPE7090 Mycoplasma penetrans HF-2 lipoprotein NP_758098.1 933274 R 272633 CDS NP_758099.1 26554165 1040597 complement(934292..934558) 1 NC_004432.1 transposase for IS150-like insertion sequence element 934558 1040597 MYPE7100 Mycoplasma penetrans HF-2 transposase for IS150-like insertion sequence element NP_758099.1 934292 R 272633 CDS NP_758100.1 26554166 1041072 complement(935044..935220) 1 NC_004432.1 hypothetical protein 935220 1041072 MYPE7115 Mycoplasma penetrans HF-2 hypothetical protein NP_758100.1 935044 R 272633 CDS NP_758101.1 26554167 1041002 complement(935471..936325) 1 NC_004432.1 MYPE6850 paralog; hypothetical protein 936325 1041002 MYPE7110 Mycoplasma penetrans HF-2 hypothetical protein NP_758101.1 935471 R 272633 CDS NP_758102.1 26554168 1040527 936508..937920 1 NC_004432.1 transposase for IS232-like insertion sequence element 937920 1040527 MYPE7120 Mycoplasma penetrans HF-2 transposase for IS232-like insertion sequence element NP_758102.1 936508 D 272633 CDS NP_758103.1 26554169 1041057 937922..938683 1 NC_004432.1 insertion sequence IS232 ATP-binding protein 938683 1041057 MYPE7130 Mycoplasma penetrans HF-2 insertion sequence IS232 ATP-binding protein NP_758103.1 937922 D 272633 CDS NP_758104.1 26554170 1040525 complement(939317..940048) 1 NC_004432.1 MYPE6850 paralog; hypothetical protein 940048 1040525 MYPE7140 Mycoplasma penetrans HF-2 hypothetical protein NP_758104.1 939317 R 272633 CDS NP_758105.1 26554171 1040536 complement(940451..940927) 1 NC_004432.1 hypothetical protein 940927 1040536 MYPE7150 Mycoplasma penetrans HF-2 hypothetical protein NP_758105.1 940451 R 272633 CDS NP_758106.1 26554172 1040567 complement(940930..941661) 1 NC_004432.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 941661 araD 1040567 araD Mycoplasma penetrans HF-2 L-ribulose-5-phosphate 4-epimerase NP_758106.1 940930 R 272633 CDS NP_758107.2 161723282 1040717 complement(941642..942532) 1 NC_004432.1 UlaE; catalyzes the epimerization of L-ribulose-5-phosphate into L-xylulose-5-phosphate; part of the anaerobic L-ascorbate degradation pathway; L-xylulose 5-phosphate 3-epimerase 942532 1040717 MYPE7170 Mycoplasma penetrans HF-2 L-xylulose 5-phosphate 3-epimerase NP_758107.2 941642 R 272633 CDS NP_758108.1 26554174 1040617 complement(942507..943160) 1 NC_004432.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase 943160 ulaD 1040617 ulaD Mycoplasma penetrans HF-2 3-keto-L-gulonate-6-phosphate decarboxylase NP_758108.1 942507 R 272633 CDS NP_758109.1 26554175 1040517 complement(943178..943546) 1 NC_004432.1 PTS system enzyme IIA component 943546 1040517 MYPE7190 Mycoplasma penetrans HF-2 PTS system enzyme IIA component NP_758109.1 943178 R 272633 CDS NP_758110.1 26554176 1041008 complement(943651..943932) 1 NC_004432.1 PTS system enzyme IIB component 943932 1041008 MYPE7200 Mycoplasma penetrans HF-2 PTS system enzyme IIB component NP_758110.1 943651 R 272633 CDS NP_758111.1 26554177 1040524 complement(943971..944192) 1 NC_004432.1 similar to transport protein SgaT; hypothetical protein 944192 1040524 MYPE7210 Mycoplasma penetrans HF-2 hypothetical protein NP_758111.1 943971 R 272633 CDS NP_758112.1 26554178 1040552 complement(944315..945868) 1 NC_004432.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 945868 ulaA 1040552 ulaA Mycoplasma penetrans HF-2 PTS system ascorbate-specific transporter subunit IIC NP_758112.1 944315 R 272633 CDS NP_758113.1 26554179 1041126 complement(945903..946079) 1 NC_004432.1 hypothetical protein 946079 1041126 MYPE7230 Mycoplasma penetrans HF-2 hypothetical protein NP_758113.1 945903 R 272633 CDS NP_758114.1 26554180 1040516 complement(946265..946957) 1 NC_004432.1 phosphotriesterase family protein 946957 1040516 MYPE7240 Mycoplasma penetrans HF-2 phosphotriesterase family protein NP_758114.1 946265 R 272633 CDS NP_758115.1 26554181 1041038 complement(947297..949975) 1 NC_004432.1 hypothetical protein 949975 1041038 MYPE7250 Mycoplasma penetrans HF-2 hypothetical protein NP_758115.1 947297 R 272633 CDS NP_758116.1 26554182 1040518 complement(949978..953469) 1 NC_004432.1 hypothetical protein 953469 1040518 MYPE7260 Mycoplasma penetrans HF-2 hypothetical protein NP_758116.1 949978 R 272633 CDS NP_758117.1 26554183 1041148 complement(953497..955299) 1 NC_004432.1 hypothetical protein 955299 1041148 MYPE7270 Mycoplasma penetrans HF-2 hypothetical protein NP_758117.1 953497 R 272633 CDS NP_758118.1 26554184 1040522 complement(955305..956261) 1 NC_004432.1 MYPE960 paralog; ABC transporter ATP-binding protein 956261 1040522 MYPE7280 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_758118.1 955305 R 272633 CDS NP_758119.1 26554185 1040521 complement(956939..957454) 1 NC_004432.1 hypothetical protein 957454 1040521 MYPE7290 Mycoplasma penetrans HF-2 hypothetical protein NP_758119.1 956939 R 272633 CDS NP_758120.1 26554186 1040628 complement(957596..960976) 1 NC_004432.1 MYPE2560 paralog; hypothetical protein 960976 1040628 MYPE7300 Mycoplasma penetrans HF-2 hypothetical protein NP_758120.1 957596 R 272633 CDS NP_758121.1 26554187 1040715 961313..962641 1 NC_004432.1 similar to OrfE1 of Mycoplasma fermentans AF179376 Expect=4.6e-52, Identities=33%; hypothetical protein 962641 1040715 MYPE7310 Mycoplasma penetrans HF-2 hypothetical protein NP_758121.1 961313 D 272633 CDS NP_758122.1 26554188 1040519 complement(962780..966100) 1 NC_004432.1 MYPE2560 paralog; hypothetical protein 966100 1040519 MYPE7320 Mycoplasma penetrans HF-2 hypothetical protein NP_758122.1 962780 R 272633 CDS NP_758123.1 26554189 1040531 complement(966342..967895) 1 NC_004432.1 P35 lipoprotein 967895 1040531 MYPE7330 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758123.1 966342 R 272633 CDS NP_758124.1 26554190 1041060 complement(968615..968824) 1 NC_004432.1 hypothetical protein 968824 1041060 MYPE7340 Mycoplasma penetrans HF-2 hypothetical protein NP_758124.1 968615 R 272633 CDS NP_758125.1 26554191 1040761 complement(968984..969325) 1 NC_004432.1 MYPE8480 paralog; hypothetical protein 969325 1040761 MYPE7350 Mycoplasma penetrans HF-2 hypothetical protein NP_758125.1 968984 R 272633 CDS NP_758126.1 26554192 1040534 complement(969560..970021) 1 NC_004432.1 MYPE8480 paralog; hypothetical protein 970021 1040534 MYPE7360 Mycoplasma penetrans HF-2 hypothetical protein NP_758126.1 969560 R 272633 CDS NP_758127.1 26554193 1041565 complement(970527..971624) 1 NC_004432.1 P35 lipoprotein 971624 1041565 MYPE7370 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758127.1 970527 R 272633 CDS NP_758128.1 26554194 1040520 complement(971999..973144) 1 NC_004432.1 MYPE7375 and MYPE7380 are predicted as the same gene with a frameshift; P35 lipoprotein 973144 1040520 MYPE7375 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758128.1 971999 R 272633 CDS NP_758129.1 26554195 1041061 complement(973092..973526) 1 NC_004432.1 MYPE7375 and MYPE7380 are predicted as the same gene with a frameshift; P35 lipoprotein 973526 1041061 MYPE7380 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758129.1 973092 R 272633 CDS NP_758130.1 26554196 1041128 complement(973865..975013) 1 NC_004432.1 P35 lipoprotein 975013 1041128 MYPE7400 Mycoplasma penetrans HF-2 P35 lipoprotein NP_758130.1 973865 R 272633 CDS NP_758131.1 26554197 1040616 complement(975304..976701) 1 NC_004432.1 hypothetical protein 976701 1040616 MYPE7410 Mycoplasma penetrans HF-2 hypothetical protein NP_758131.1 975304 R 272633 CDS NP_758132.1 26554198 1041092 complement(976706..977152) 1 NC_004432.1 nitrogen fixation protein NifU 977152 1041092 MYPE7420 Mycoplasma penetrans HF-2 nitrogen fixation protein NifU NP_758132.1 976706 R 272633 CDS NP_758133.1 26554199 1040532 complement(977139..978365) 1 NC_004432.1 aminotransferase NifS 978365 1040532 MYPE7430 Mycoplasma penetrans HF-2 aminotransferase NifS NP_758133.1 977139 R 272633 CDS NP_758134.1 26554200 1040560 complement(978367..978987) 1 NC_004432.1 hypothetical protein 978987 1040560 MYPE7440 Mycoplasma penetrans HF-2 hypothetical protein NP_758134.1 978367 R 272633 CDS NP_758135.1 26554201 1040966 complement(979006..979752) 1 NC_004432.1 ABC transporter ATP-binding protein 979752 1040966 MYPE7450 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_758135.1 979006 R 272633 CDS NP_758136.1 26554202 1041083 complement(979900..980586) 1 NC_004432.1 acetyltransferase (GNAT) family protein 980586 1041083 MYPE7460 Mycoplasma penetrans HF-2 acetyltransferase (GNAT) family protein NP_758136.1 979900 R 272633 CDS NP_758137.1 26554203 1040529 complement(980991..983066) 1 NC_004432.1 ABC transporter ATP-binding protein 983066 1040529 MYPE7470 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_758137.1 980991 R 272633 CDS NP_758138.1 26554204 1041029 complement(983164..983673) 1 NC_004432.1 MYPE7490 paralog; hypothetical protein 983673 1041029 MYPE7480 Mycoplasma penetrans HF-2 hypothetical protein NP_758138.1 983164 R 272633 CDS NP_758139.1 26554205 1040551 complement(984101..984664) 1 NC_004432.1 paralog family; hypothetical protein 984664 1040551 MYPE7490 Mycoplasma penetrans HF-2 hypothetical protein NP_758139.1 984101 R 272633 CDS NP_758140.1 26554206 1041036 complement(985032..985574) 1 NC_004432.1 MYPE7490 paralog; hypothetical protein 985574 1041036 MYPE7500 Mycoplasma penetrans HF-2 hypothetical protein NP_758140.1 985032 R 272633 CDS NP_758141.1 26554207 1040547 complement(986000..986542) 1 NC_004432.1 MYPE7490 paralog; hypothetical protein 986542 1040547 MYPE7510 Mycoplasma penetrans HF-2 hypothetical protein NP_758141.1 986000 R 272633 CDS NP_758142.1 26554208 1040919 complement(986910..987368) 1 NC_004432.1 MYPE7490 paralog; hypothetical protein 987368 1040919 MYPE7520 Mycoplasma penetrans HF-2 hypothetical protein NP_758142.1 986910 R 272633 CDS NP_758143.1 26554209 1040565 complement(987711..989504) 1 NC_004432.1 MYPE2470 paralog; ABC transporter ATP-binding protein 989504 1040565 MYPE7530 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_758143.1 987711 R 272633 CDS NP_758144.1 26554210 1040561 complement(989507..991276) 1 NC_004432.1 MYPE2470 paralog; ABC transporter ATP-binding protein 991276 1040561 MYPE7540 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_758144.1 989507 R 272633 CDS NP_758145.1 26554211 1041149 complement(991633..992241) 1 NC_004432.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 992241 rpsD 1041149 rpsD Mycoplasma penetrans HF-2 30S ribosomal protein S4 NP_758145.1 991633 R 272633 CDS NP_758146.1 26554212 1040832 992543..993472 1 NC_004432.1 hypothetical protein 993472 1040832 MYPE7560 Mycoplasma penetrans HF-2 hypothetical protein NP_758146.1 992543 D 272633 CDS NP_758147.1 26554213 1040535 complement(993492..995807) 1 NC_004432.1 partial sequence of MYPE7590 paralog, similar to lipoprotein of Mycoplasma genitalium U39713 Expect = 7.5e-91, Identities = 32%; lipoprotein 995807 1040535 MYPE7570 Mycoplasma penetrans HF-2 lipoprotein NP_758147.1 993492 R 272633 CDS NP_758148.1 26554214 1040533 complement(995770..996405) 1 NC_004432.1 lipoprotein 996405 1040533 MYPE7580 Mycoplasma penetrans HF-2 lipoprotein NP_758148.1 995770 R 272633 CDS NP_758149.1 26554215 1040623 complement(996518..999436) 1 NC_004432.1 paralog family, similar to lipoprotein of Mycoplasma genitalium U39713; lipoprotein 999436 1040623 MYPE7590 Mycoplasma penetrans HF-2 lipoprotein NP_758149.1 996518 R 272633 CDS NP_758150.1 26554216 1040568 complement(999563..1002460) 1 NC_004432.1 MYPE7590 paralog, similar to lipoprotein of Mycoplasma genitalium U39713; lipoprotein 1002460 1040568 MYPE7600 Mycoplasma penetrans HF-2 lipoprotein NP_758150.1 999563 R 272633 CDS NP_758151.1 26554217 1040611 complement(1002603..1005635) 1 NC_004432.1 MYPE7590 paralog, similar to lipoprotein of Mycoplasma genitalium U39713; lipoprotein 1005635 1040611 MYPE7610 Mycoplasma penetrans HF-2 lipoprotein NP_758151.1 1002603 R 272633 CDS NP_758152.1 26554218 1040613 complement(1005790..1008762) 1 NC_004432.1 MYPE7590 paralog, similar to lipoprotein of Mycoplasma genitalium U39713; lipoprotein 1008762 1040613 MYPE7620 Mycoplasma penetrans HF-2 lipoprotein NP_758152.1 1005790 R 272633 CDS NP_758153.1 26554219 1040589 complement(1008961..1009545) 1 NC_004432.1 hypothetical protein 1009545 1040589 MYPE7630 Mycoplasma penetrans HF-2 hypothetical protein NP_758153.1 1008961 R 272633 CDS NP_758154.1 26554220 1041030 complement(1009740..1010477) 1 NC_004432.1 hypothetical protein 1010477 1041030 MYPE7640 Mycoplasma penetrans HF-2 hypothetical protein NP_758154.1 1009740 R 272633 CDS NP_758155.1 26554221 1041045 complement(1010553..1011935) 1 NC_004432.1 MYPE5960 paralog, Pfam domain DUF234 archaebacterial proteins; hypothetical protein 1011935 1041045 MYPE7650 Mycoplasma penetrans HF-2 hypothetical protein NP_758155.1 1010553 R 272633 CDS NP_758156.1 26554222 1040612 complement(1012111..1015242) 1 NC_004432.1 MYPE7720 paralog; hypothetical protein 1015242 1040612 MYPE7660 Mycoplasma penetrans HF-2 hypothetical protein NP_758156.1 1012111 R 272633 CDS NP_758157.1 26554223 1040585 complement(1015884..1018013) 1 NC_004432.1 PTS system fructose-specific enzyme IIABC component 1018013 1040585 MYPE7670 Mycoplasma penetrans HF-2 PTS system fructose-specific enzyme IIABC component NP_758157.1 1015884 R 272633 CDS NP_758158.1 26554224 1041120 complement(1018103..1018366) 1 NC_004432.1 hypothetical protein 1018366 1041120 MYPE7680 Mycoplasma penetrans HF-2 hypothetical protein NP_758158.1 1018103 R 272633 CDS NP_758159.1 26554225 1040614 complement(1018351..1020285) 1 NC_004432.1 regulatory protein 1020285 1040614 MYPE7690 Mycoplasma penetrans HF-2 regulatory protein NP_758159.1 1018351 R 272633 CDS NP_758160.1 26554226 1040523 complement(1020372..1021295) 1 NC_004432.1 mannose-6-phosphate isomerase 1021295 1040523 MYPE7700 Mycoplasma penetrans HF-2 mannose-6-phosphate isomerase NP_758160.1 1020372 R 272633 CDS NP_758161.1 26554227 1040583 complement(1021478..1024606) 1 NC_004432.1 MYPE7720 paralog; hypothetical protein 1024606 1040583 MYPE7710 Mycoplasma penetrans HF-2 hypothetical protein NP_758161.1 1021478 R 272633 CDS NP_758162.1 26554228 1040608 complement(1024895..1028020) 1 NC_004432.1 paralog family, predicted integral membrane protein; hypothetical protein 1028020 1040608 MYPE7720 Mycoplasma penetrans HF-2 hypothetical protein NP_758162.1 1024895 R 272633 CDS NP_758163.1 26554229 1040610 complement(1028231..1031242) 1 NC_004432.1 MYPE7720 paralog; hypothetical protein 1031242 1040610 MYPE7730 Mycoplasma penetrans HF-2 hypothetical protein NP_758163.1 1028231 R 272633 CDS NP_758164.1 26554230 1040627 complement(1031624..1032538) 1 NC_004432.1 1-phosphofructokinase 1032538 1040627 MYPE7750 Mycoplasma penetrans HF-2 1-phosphofructokinase NP_758164.1 1031624 R 272633 CDS NP_758165.1 26554231 1040558 complement(1032492..1034708) 1 NC_004432.1 PTS system fructose-specific IIABC component 1034708 1040558 MYPE7760 Mycoplasma penetrans HF-2 PTS system fructose-specific IIABC component NP_758165.1 1032492 R 272633 CDS NP_758166.1 26554232 1040559 complement(1034698..1035468) 1 NC_004432.1 transcriptional regulator DeoR family protein 1035468 1040559 MYPE7770 Mycoplasma penetrans HF-2 transcriptional regulator DeoR family protein NP_758166.1 1034698 R 272633 CDS NP_758167.1 26554233 1040615 1035998..1037554 1 NC_004432.1 IS1202 transposase 1037554 1040615 MYPE7780 Mycoplasma penetrans HF-2 IS1202 transposase NP_758167.1 1035998 D 272633 CDS NP_758168.1 26554234 1040584 complement(1037799..1041953) 1 NC_004432.1 MYPE7800 paralog; hypothetical protein 1041953 1040584 MYPE7790 Mycoplasma penetrans HF-2 hypothetical protein NP_758168.1 1037799 R 272633 CDS NP_758169.1 26554235 1040602 complement(1042320..1046654) 1 NC_004432.1 paralog family, predicted integral membrane protein; hypothetical protein 1046654 1040602 MYPE7800 Mycoplasma penetrans HF-2 hypothetical protein NP_758169.1 1042320 R 272633 CDS NP_758170.1 26554236 1040609 complement(1046891..1050640) 1 NC_004432.1 MYPE7800 paralog; hypothetical protein 1050640 1040609 MYPE7810 Mycoplasma penetrans HF-2 hypothetical protein NP_758170.1 1046891 R 272633 CDS NP_758171.1 26554237 1040588 complement(1050844..1051245) 1 NC_004432.1 hypothetical protein 1051245 1040588 MYPE7820 Mycoplasma penetrans HF-2 hypothetical protein NP_758171.1 1050844 R 272633 CDS NP_758172.1 26554238 1040590 1051528..1052781 1 NC_004432.1 predicted ATPase, MYPE4220 paralog; hypothetical protein 1052781 1040590 MYPE7830 Mycoplasma penetrans HF-2 hypothetical protein NP_758172.1 1051528 D 272633 CDS NP_758173.1 26554239 1041469 complement(1053118..1053747) 1 NC_004432.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1053747 pyrE 1041469 pyrE Mycoplasma penetrans HF-2 orotate phosphoribosyltransferase NP_758173.1 1053118 R 272633 CDS NP_758174.1 26554240 1040528 complement(1053764..1054459) 1 NC_004432.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1054459 1040528 MYPE7850 Mycoplasma penetrans HF-2 orotidine 5'-phosphate decarboxylase NP_758174.1 1053764 R 272633 CDS NP_758175.1 26554241 1040625 complement(1054461..1055381) 1 NC_004432.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 1055381 1040625 MYPE7860 Mycoplasma penetrans HF-2 dihydroorotate dehydrogenase 1B NP_758175.1 1054461 R 272633 CDS NP_758176.1 26554242 1040606 complement(1055385..1056182) 1 NC_004432.1 dihydroorotate dehydrogenase electron transfer subunit 1056182 1040606 MYPE7870 Mycoplasma penetrans HF-2 dihydroorotate dehydrogenase electron transfer subunit NP_758176.1 1055385 R 272633 CDS NP_758177.1 26554243 1040607 complement(1056267..1057547) 1 NC_004432.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1057547 pyrC 1040607 pyrC Mycoplasma penetrans HF-2 dihydroorotase NP_758177.1 1056267 R 272633 CDS NP_758178.1 26554244 1040599 complement(1057556..1058458) 1 NC_004432.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 1058458 pyrB 1040599 pyrB Mycoplasma penetrans HF-2 aspartate carbamoyltransferase NP_758178.1 1057556 R 272633 CDS NP_758179.1 26554245 1040598 complement(1058458..1058979) 1 NC_004432.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 1058979 1040598 MYPE7900 Mycoplasma penetrans HF-2 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase NP_758179.1 1058458 R 272633 CDS NP_758180.1 26554246 1040603 complement(1059326..1062826) 1 NC_004432.1 predicted integral membrane protein, paralog family; hypothetical protein 1062826 1040603 MYPE7910 Mycoplasma penetrans HF-2 hypothetical protein NP_758180.1 1059326 R 272633 CDS NP_758181.1 26554247 1040626 complement(1062987..1066511) 1 NC_004432.1 MYPE7910 paralog; hypothetical protein 1066511 1040626 MYPE7920 Mycoplasma penetrans HF-2 hypothetical protein NP_758181.1 1062987 R 272633 CDS NP_758182.1 26554248 1040605 complement(1066617..1070204) 1 NC_004432.1 MYPE7910 paralog; hypothetical protein 1070204 1040605 MYPE7930 Mycoplasma penetrans HF-2 hypothetical protein NP_758182.1 1066617 R 272633 CDS NP_758183.1 26554249 1040604 complement(1070374..1071849) 1 NC_004432.1 hypothetical protein 1071849 1040604 MYPE7940 Mycoplasma penetrans HF-2 hypothetical protein NP_758183.1 1070374 R 272633 CDS NP_758184.1 26554250 1040587 1071969..1072748 1 NC_004432.1 hypothetical protein 1072748 1040587 MYPE7950 Mycoplasma penetrans HF-2 hypothetical protein NP_758184.1 1071969 D 272633 CDS NP_758185.1 26554251 1040593 complement(1072817..1074052) 1 NC_004432.1 tyrosyl-tRNA synthetase 1074052 1040593 MYPE7960 Mycoplasma penetrans HF-2 tyrosyl-tRNA synthetase NP_758185.1 1072817 R 272633 CDS NP_758186.1 26554252 1040570 complement(1074084..1074884) 1 NC_004432.1 MYPE4720 paralog; aldo/keto reductase 1074884 1040570 MYPE7970 Mycoplasma penetrans HF-2 aldo/keto reductase NP_758186.1 1074084 R 272633 CDS NP_758187.1 26554253 1040544 1075160..1075678 1 NC_004432.1 hypothetical protein 1075678 1040544 MYPE7980 Mycoplasma penetrans HF-2 hypothetical protein NP_758187.1 1075160 D 272633 CDS NP_758188.1 26554254 1040596 1075683..1076396 1 NC_004432.1 glucose-inhibited division protein GidB 1076396 1040596 MYPE7990 Mycoplasma penetrans HF-2 glucose-inhibited division protein GidB NP_758188.1 1075683 D 272633 CDS NP_758189.1 26554255 1040601 1076383..1077048 1 NC_004432.1 hypothetical protein 1077048 1040601 MYPE8000 Mycoplasma penetrans HF-2 hypothetical protein NP_758189.1 1076383 D 272633 CDS NP_758190.1 26554256 1040600 complement(1077052..1078464) 1 NC_004432.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1078464 1040600 MYPE8010 Mycoplasma penetrans HF-2 prolyl-tRNA synthetase NP_758190.1 1077052 R 272633 CDS NP_758191.1 26554257 1040582 complement(1078466..1079212) 1 NC_004432.1 hypothetical protein 1079212 1040582 MYPE8020 Mycoplasma penetrans HF-2 hypothetical protein NP_758191.1 1078466 R 272633 CDS NP_758192.1 26554258 1041577 complement(1079214..1080587) 1 NC_004432.1 ATP-dependent RNA helicase 1080587 1041577 MYPE8030 Mycoplasma penetrans HF-2 ATP-dependent RNA helicase NP_758192.1 1079214 R 272633 CDS NP_758193.1 26554259 1041580 complement(1080743..1081462) 1 NC_004432.1 hypothetical protein 1081462 1041580 MYPE8040 Mycoplasma penetrans HF-2 hypothetical protein NP_758193.1 1080743 R 272633 CDS NP_758194.1 26554260 1040586 complement(1081507..1083735) 1 NC_004432.1 hypothetical protein 1083735 1040586 MYPE8050 Mycoplasma penetrans HF-2 hypothetical protein NP_758194.1 1081507 R 272633 CDS NP_758195.1 26554261 1041575 complement(1083834..1084439) 1 NC_004432.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1084439 recR 1041575 recR Mycoplasma penetrans HF-2 recombination protein RecR NP_758195.1 1083834 R 272633 CDS NP_758196.1 26554262 1040579 complement(1084442..1084726) 1 NC_004432.1 hypothetical protein 1084726 1040579 MYPE8070 Mycoplasma penetrans HF-2 hypothetical protein NP_758196.1 1084442 R 272633 CDS NP_758197.1 26554263 1041579 complement(1084733..1087147) 1 NC_004432.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1087147 1041579 MYPE8080 Mycoplasma penetrans HF-2 DNA polymerase III subunits gamma and tau NP_758197.1 1084733 R 272633 CDS NP_758198.1 26554264 1040581 complement(1087299..1088012) 1 NC_004432.1 hypothetical protein 1088012 1040581 MYPE8090 Mycoplasma penetrans HF-2 hypothetical protein NP_758198.1 1087299 R 272633 CDS NP_758199.1 26554265 1040594 complement(1088005..1088658) 1 NC_004432.1 hypothetical protein 1088658 1040594 MYPE8100 Mycoplasma penetrans HF-2 hypothetical protein NP_758199.1 1088005 R 272633 CDS NP_758200.1 26554266 1040595 complement(1088734..1089516) 1 NC_004432.1 similar to hydrolase of Mycoplasma pneumoniae AE000016 Expect=7.5e-42, Identities=37%, containing Pfam domain TatD related DNase : PF01026; hypothetical protein 1089516 1040595 MYPE8110 Mycoplasma penetrans HF-2 hypothetical protein NP_758200.1 1088734 R 272633 CDS NP_758201.1 26554267 1041567 complement(1089527..1090861) 1 NC_004432.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1090861 trmE 1041567 trmE Mycoplasma penetrans HF-2 tRNA modification GTPase TrmE NP_758201.1 1089527 R 272633 CDS NP_758202.1 26554268 1041563 complement(1090864..1091691) 1 NC_004432.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1091691 1041563 MYPE8130 Mycoplasma penetrans HF-2 DNA polymerase III subunit delta' NP_758202.1 1090864 R 272633 CDS NP_758203.1 26554269 1041574 complement(1091701..1092345) 1 NC_004432.1 thymidylate kinase 1092345 1041574 MYPE8140 Mycoplasma penetrans HF-2 thymidylate kinase NP_758203.1 1091701 R 272633 CDS NP_758204.1 26554270 1041578 complement(1092593..1093408) 1 NC_004432.1 hypothetical protein 1093408 1041578 MYPE8150 Mycoplasma penetrans HF-2 hypothetical protein NP_758204.1 1092593 R 272633 CDS NP_758205.1 26554271 1041556 complement(1093589..1095004) 1 NC_004432.1 phosphoglycerate kinase 1095004 1041556 MYPE8160 Mycoplasma penetrans HF-2 phosphoglycerate kinase NP_758205.1 1093589 R 272633 CDS NP_758206.1 26554272 1041576 complement(1095027..1096028) 1 NC_004432.1 glyceraladehyde-3-phosphate dehydrogenase 1096028 1041576 MYPE8170 Mycoplasma penetrans HF-2 glyceraladehyde-3-phosphate dehydrogenase NP_758206.1 1095027 R 272633 CDS NP_758207.1 26554273 1041573 complement(1096291..1097109) 1 NC_004432.1 integrase 1097109 1041573 MYPE8180 Mycoplasma penetrans HF-2 integrase NP_758207.1 1096291 R 272633 CDS NP_758208.1 26554274 1041553 1097228..1098475 1 NC_004432.1 type I restriction-modification system S subunit 1098475 1041553 MYPE8190 Mycoplasma penetrans HF-2 type I restriction-modification system S subunit NP_758208.1 1097228 D 272633 CDS NP_758209.1 26554275 1040577 complement(1098599..1100158) 1 NC_004432.1 type I restriction-modification system S subunit 1100158 1040577 MYPE8200 Mycoplasma penetrans HF-2 type I restriction-modification system S subunit NP_758209.1 1098599 R 272633 CDS NP_758210.1 26554276 1041572 complement(1100165..1101637) 1 NC_004432.1 type I restriction-modification system M subunit 1101637 1041572 MYPE8210 Mycoplasma penetrans HF-2 type I restriction-modification system M subunit NP_758210.1 1100165 R 272633 CDS NP_758211.1 26554277 1041569 complement(1101659..1103527) 1 NC_004432.1 type I restriction-modification system R subunit 1103527 1041569 MYPE8220 Mycoplasma penetrans HF-2 type I restriction-modification system R subunit NP_758211.1 1101659 R 272633 CDS NP_758212.1 26554278 1041550 complement(1103478..1103999) 1 NC_004432.1 type I restriction-modification system R subunit, partial 1103999 1041550 MYPE8230 Mycoplasma penetrans HF-2 type I restriction-modification system R subunit, partial NP_758212.1 1103478 R 272633 CDS NP_758213.1 26554279 1041545 complement(1104359..1105471) 1 NC_004432.1 tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase 1105471 1041545 MYPE8250 Mycoplasma penetrans HF-2 tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase NP_758213.1 1104359 R 272633 CDS NP_758214.1 26554280 1041542 1105765..1105917 1 NC_004432.1 hypothetical protein 1105917 1041542 MYPE8260 Mycoplasma penetrans HF-2 hypothetical protein NP_758214.1 1105765 D 272633 CDS NP_758215.1 26554281 1041551 1106271..1106678 1 NC_004432.1 paralog family; hypothetical protein 1106678 1041551 MYPE8270 Mycoplasma penetrans HF-2 hypothetical protein NP_758215.1 1106271 D 272633 CDS NP_758216.1 26554282 1041554 1106884..1107273 1 NC_004432.1 paralog of MYPE8270; hypothetical protein 1107273 1041554 MYPE8280 Mycoplasma penetrans HF-2 hypothetical protein NP_758216.1 1106884 D 272633 CDS NP_758217.1 26554283 1041539 1107478..1107825 1 NC_004432.1 paralog of MYPE8270; hypothetical protein 1107825 1041539 MYPE8290 Mycoplasma penetrans HF-2 hypothetical protein NP_758217.1 1107478 D 272633 CDS NP_758218.1 26554284 1041544 1108030..1108377 1 NC_004432.1 paralog of MYPE8270; hypothetical protein 1108377 1041544 MYPE8300 Mycoplasma penetrans HF-2 hypothetical protein NP_758218.1 1108030 D 272633 CDS NP_758219.1 26554285 1041552 complement(1108514..1109182) 1 NC_004432.1 predicted integral membrane protein; hypothetical protein 1109182 1041552 MYPE8310 Mycoplasma penetrans HF-2 hypothetical protein NP_758219.1 1108514 R 272633 CDS NP_758220.1 26554286 1041548 complement(1109345..1109749) 1 NC_004432.1 predicted integral membrane protein; hypothetical protein 1109749 1041548 MYPE8320 Mycoplasma penetrans HF-2 hypothetical protein NP_758220.1 1109345 R 272633 CDS NP_758221.1 26554287 1041555 complement(1109781..1110683) 1 NC_004432.1 prolyl aminopeptidase 1110683 1041555 MYPE8330 Mycoplasma penetrans HF-2 prolyl aminopeptidase NP_758221.1 1109781 R 272633 CDS NP_758222.1 26554288 1041533 complement(1110698..1111459) 1 NC_004432.1 hypothetical protein 1111459 1041533 MYPE8340 Mycoplasma penetrans HF-2 hypothetical protein NP_758222.1 1110698 R 272633 CDS NP_758223.1 26554289 1041534 complement(1111461..1112135) 1 NC_004432.1 hypothetical protein 1112135 1041534 MYPE8350 Mycoplasma penetrans HF-2 hypothetical protein NP_758223.1 1111461 R 272633 CDS NP_758224.1 26554290 1041543 complement(1112116..1113399) 1 NC_004432.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor 1113399 1041543 MYPE8360 Mycoplasma penetrans HF-2 RNA polymerase sigma factor NP_758224.1 1112116 R 272633 CDS NP_758225.1 26554291 1041546 complement(1113592..1115022) 1 NC_004432.1 cell division protein FtsZ 1115022 1041546 MYPE8370 Mycoplasma penetrans HF-2 cell division protein FtsZ NP_758225.1 1113592 R 272633 CDS NP_758226.1 26554292 1041530 complement(1115598..1117076) 1 NC_004432.1 hypothetical protein 1117076 1041530 MYPE8380 Mycoplasma penetrans HF-2 hypothetical protein NP_758226.1 1115598 R 272633 CDS NP_758227.1 26554293 1041537 complement(1117210..1118805) 1 NC_004432.1 hypothetical protein 1118805 1041537 MYPE8390 Mycoplasma penetrans HF-2 hypothetical protein NP_758227.1 1117210 R 272633 CDS NP_758228.1 26554294 1041538 complement(1118942..1121821) 1 NC_004432.1 hypothetical protein 1121821 1041538 MYPE8400 Mycoplasma penetrans HF-2 hypothetical protein NP_758228.1 1118942 R 272633 CDS NP_758229.1 26554295 1041547 complement(1121987..1122979) 1 NC_004432.1 hypothetical protein 1122979 1041547 MYPE8410 Mycoplasma penetrans HF-2 hypothetical protein NP_758229.1 1121987 R 272633 CDS NP_758230.1 26554296 1041522 complement(1122982..1124451) 1 NC_004432.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1124451 lysS 1041522 lysS Mycoplasma penetrans HF-2 lysyl-tRNA synthetase NP_758230.1 1122982 R 272633 CDS NP_758231.1 26554297 1041526 complement(1124580..1127846) 1 NC_004432.1 MYPE8450 paralog; hypothetical protein 1127846 1041526 MYPE8430 Mycoplasma penetrans HF-2 hypothetical protein NP_758231.1 1124580 R 272633 CDS NP_758232.1 26554298 1041532 complement(1128026..1131283) 1 NC_004432.1 MYPE8450 paralog; hypothetical protein 1131283 1041532 MYPE8440 Mycoplasma penetrans HF-2 hypothetical protein NP_758232.1 1128026 R 272633 CDS NP_758233.1 26554299 1041540 complement(1131560..1134814) 1 NC_004432.1 paralog family; hypothetical protein 1134814 1041540 MYPE8450 Mycoplasma penetrans HF-2 hypothetical protein NP_758233.1 1131560 R 272633 CDS NP_758234.1 26554300 1041523 complement(1134961..1138755) 1 NC_004432.1 ATP/GTP-binding protein 1138755 1041523 MYPE8460 Mycoplasma penetrans HF-2 ATP/GTP-binding protein NP_758234.1 1134961 R 272633 CDS NP_758235.1 26554301 1041525 complement(1138967..1139413) 1 NC_004432.1 MYPE8480 paralog; hypothetical protein 1139413 1041525 MYPE8470 Mycoplasma penetrans HF-2 hypothetical protein NP_758235.1 1138967 R 272633 CDS NP_758236.1 26554302 1041529 complement(1139542..1140087) 1 NC_004432.1 paralog family; hypothetical protein 1140087 1041529 MYPE8480 Mycoplasma penetrans HF-2 hypothetical protein NP_758236.1 1139542 R 272633 CDS NP_758237.1 26554303 1041541 complement(1140671..1143949) 1 NC_004432.1 MYPE8450 paralog; hypothetical protein 1143949 1041541 MYPE8490 Mycoplasma penetrans HF-2 hypothetical protein NP_758237.1 1140671 R 272633 CDS NP_758238.1 26554304 1041515 complement(1144066..1145286) 1 NC_004432.1 protease 1145286 1041515 MYPE8500 Mycoplasma penetrans HF-2 protease NP_758238.1 1144066 R 272633 CDS NP_758239.1 26554305 1041519 complement(1145289..1146221) 1 NC_004432.1 protease 1146221 1041519 MYPE8510 Mycoplasma penetrans HF-2 protease NP_758239.1 1145289 R 272633 CDS NP_758240.1 26554306 1041527 complement(1146206..1146793) 1 NC_004432.1 O-methyltransferase 1146793 1041527 MYPE8520 Mycoplasma penetrans HF-2 O-methyltransferase NP_758240.1 1146206 R 272633 CDS NP_758241.1 26554307 1041514 complement(1146810..1147238) 1 NC_004432.1 hypothetical protein 1147238 1041514 MYPE8530 Mycoplasma penetrans HF-2 hypothetical protein NP_758241.1 1146810 R 272633 CDS NP_758242.1 26554308 1041516 complement(1147222..1150014) 1 NC_004432.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1150014 alaS 1041516 alaS Mycoplasma penetrans HF-2 alanyl-tRNA synthetase NP_758242.1 1147222 R 272633 CDS NP_758243.1 26554309 1041528 1150643..1152241 1 NC_004432.1 MYPE8600 paralog; lipoprotein 1152241 1041528 MYPE8550 Mycoplasma penetrans HF-2 lipoprotein NP_758243.1 1150643 D 272633 CDS NP_758244.1 26554310 1041531 1152322..1153800 1 NC_004432.1 haloacid dehalogenase 1153800 1041531 MYPE8560 Mycoplasma penetrans HF-2 haloacid dehalogenase NP_758244.1 1152322 D 272633 CDS NP_758245.1 26554311 1041474 1153801..1155585 1 NC_004432.1 spermidine/putrescine transport ATP-binding protein PotA 1155585 1041474 MYPE8570 Mycoplasma penetrans HF-2 spermidine/putrescine transport ATP-binding protein PotA NP_758245.1 1153801 D 272633 CDS NP_758246.1 26554312 1041509 1155554..1156459 1 NC_004432.1 spermidine/putrescine transport system permease PotB 1156459 1041509 MYPE8580 Mycoplasma penetrans HF-2 spermidine/putrescine transport system permease PotB NP_758246.1 1155554 D 272633 CDS NP_758247.1 26554313 1041493 1156452..1157303 1 NC_004432.1 spermidine/putrescine transport system permease PotC 1157303 1041493 MYPE8590 Mycoplasma penetrans HF-2 spermidine/putrescine transport system permease PotC NP_758247.1 1156452 D 272633 CDS NP_758248.1 26554314 1041520 1157291..1158973 1 NC_004432.1 paralog family; lipoprotein 1158973 1041520 MYPE8600 Mycoplasma penetrans HF-2 lipoprotein NP_758248.1 1157291 D 272633 CDS NP_758249.1 26554315 1041490 1158951..1159916 1 NC_004432.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1159916 1041490 MYPE8610 Mycoplasma penetrans HF-2 DNA-binding/iron metalloprotein/AP endonuclease NP_758249.1 1158951 D 272633 CDS NP_758250.1 26554316 1041513 1160388..1161509 1 NC_004432.1 hypothetical protein 1161509 1041513 MYPE8620 Mycoplasma penetrans HF-2 hypothetical protein NP_758250.1 1160388 D 272633 CDS NP_758251.1 26554317 1041521 1161493..1162005 1 NC_004432.1 hypothetical protein 1162005 1041521 MYPE8630 Mycoplasma penetrans HF-2 hypothetical protein NP_758251.1 1161493 D 272633 CDS NP_758252.1 26554318 1041524 complement(1162174..1163937) 1 NC_004432.1 predicted integral membrane protein; permease 1163937 1041524 MYPE8640 Mycoplasma penetrans HF-2 permease NP_758252.1 1162174 R 272633 CDS NP_758253.1 26554319 1041472 1164167..1165153 1 NC_004432.1 lipoate protein ligase A 1165153 1041472 MYPE8650 Mycoplasma penetrans HF-2 lipoate protein ligase A NP_758253.1 1164167 D 272633 CDS NP_758254.1 26554320 1041441 complement(1165989..1167953) 1 NC_004432.1 predicted integral membrane protein; Trk-type cation transport protein 1167953 1041441 MYPE8660 Mycoplasma penetrans HF-2 Trk-type cation transport protein NP_758254.1 1165989 R 272633 CDS NP_758255.1 26554321 1041510 complement(1168261..1168644) 1 NC_004432.1 hypothetical protein 1168644 1041510 MYPE8670 Mycoplasma penetrans HF-2 hypothetical protein NP_758255.1 1168261 R 272633 CDS NP_758256.1 26554322 1041458 complement(1168840..1170135) 1 NC_004432.1 hypothetical protein 1170135 1041458 MYPE8680 Mycoplasma penetrans HF-2 hypothetical protein NP_758256.1 1168840 R 272633 CDS NP_758257.1 26554323 1041462 1170274..1171866 1 NC_004432.1 formate-tetrahydrofolate ligase 1171866 1041462 MYPE8690 Mycoplasma penetrans HF-2 formate-tetrahydrofolate ligase NP_758257.1 1170274 D 272633 CDS NP_758258.1 26554324 1041511 complement(1171921..1173828) 1 NC_004432.1 end peptidase 1173828 1041511 MYPE8700 Mycoplasma penetrans HF-2 end peptidase NP_758258.1 1171921 R 272633 CDS NP_758259.1 26554325 1041446 complement(1173952..1175967) 1 NC_004432.1 heavy-metal transporting P-type ATPase 1175967 1041446 MYPE8710 Mycoplasma penetrans HF-2 heavy-metal transporting P-type ATPase NP_758259.1 1173952 R 272633 CDS NP_758260.1 26554326 1041434 complement(1176080..1176295) 1 NC_004432.1 heavy-metal transporting ATPase, partial 1176295 1041434 MYPE8720 Mycoplasma penetrans HF-2 heavy-metal transporting ATPase, partial NP_758260.1 1176080 R 272633 CDS NP_758261.1 26554327 1041440 complement(1176403..1176990) 1 NC_004432.1 hypothetical protein 1176990 1041440 MYPE8730 Mycoplasma penetrans HF-2 hypothetical protein NP_758261.1 1176403 R 272633 CDS NP_758262.1 26554328 1041461 complement(1176983..1179358) 1 NC_004432.1 oligopeptide ABC transporter ATP-binding protein 1179358 1041461 MYPE8750 Mycoplasma penetrans HF-2 oligopeptide ABC transporter ATP-binding protein NP_758262.1 1176983 R 272633 CDS NP_758263.1 26554329 1041428 complement(1179372..1180892) 1 NC_004432.1 oligopeptide ABC transporter ATP-binding protein 1180892 1041428 MYPE8760 Mycoplasma penetrans HF-2 oligopeptide ABC transporter ATP-binding protein NP_758263.1 1179372 R 272633 CDS NP_758264.1 26554330 1041433 complement(1180895..1182073) 1 NC_004432.1 oligopeptide ABC transporter permease protein 1182073 1041433 MYPE8770 Mycoplasma penetrans HF-2 oligopeptide ABC transporter permease protein NP_758264.1 1180895 R 272633 CDS NP_758265.1 26554331 1041432 complement(1182077..1183321) 1 NC_004432.1 oligopeptide ABC transporter permease protein 1183321 1041432 MYPE8780 Mycoplasma penetrans HF-2 oligopeptide ABC transporter permease protein NP_758265.1 1182077 R 272633 CDS NP_758266.1 26554332 1041471 complement(1183561..1183731) 1 NC_004432.1 hypothetical protein 1183731 1041471 MYPE8790 Mycoplasma penetrans HF-2 hypothetical protein NP_758266.1 1183561 R 272633 CDS NP_758267.1 26554333 1041425 1184312..1184827 1 NC_004432.1 hypothetical protein 1184827 1041425 MYPE8800 Mycoplasma penetrans HF-2 hypothetical protein NP_758267.1 1184312 D 272633 CDS NP_758268.1 26554334 1041406 complement(1184942..1185364) 1 NC_004432.1 hypothetical protein 1185364 1041406 MYPE8810 Mycoplasma penetrans HF-2 hypothetical protein NP_758268.1 1184942 R 272633 CDS NP_758269.1 26554335 1041417 complement(1185818..1188520) 1 NC_004432.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1188520 ileS 1041417 ileS Mycoplasma penetrans HF-2 isoleucyl-tRNA synthetase NP_758269.1 1185818 R 272633 CDS NP_758270.1 26554336 1041423 complement(1188699..1189685) 1 NC_004432.1 glycosyltransferase 1189685 1041423 MYPE8830 Mycoplasma penetrans HF-2 glycosyltransferase NP_758270.1 1188699 R 272633 CDS NP_758271.1 26554337 1041416 complement(1189724..1190770) 1 NC_004432.1 transcription antitermination factor 1190770 1041416 MYPE8840 Mycoplasma penetrans HF-2 transcription antitermination factor NP_758271.1 1189724 R 272633 CDS NP_758272.1 26554338 1041415 complement(1190805..1191158) 1 NC_004432.1 preprotein translocase subunit SecE 1191158 1041415 MYPE8850 Mycoplasma penetrans HF-2 preprotein translocase subunit SecE NP_758272.1 1190805 R 272633 CDS NP_758273.1 26554339 1041408 1191716..1192675 1 NC_004432.1 hypothetical protein 1192675 1041408 MYPE8860 Mycoplasma penetrans HF-2 hypothetical protein NP_758273.1 1191716 D 272633 CDS NP_758274.1 26554340 1041400 complement(1192810..1194078) 1 NC_004432.1 hypothetical protein 1194078 1041400 MYPE8870 Mycoplasma penetrans HF-2 hypothetical protein NP_758274.1 1192810 R 272633 CDS NP_758275.1 26554341 1041386 complement(1194198..1194911) 1 NC_004432.1 hypothetical protein 1194911 1041386 MYPE8880 Mycoplasma penetrans HF-2 hypothetical protein NP_758275.1 1194198 R 272633 CDS NP_758276.1 26554342 1041414 complement(1194933..1196921) 1 NC_004432.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1196921 1041414 MYPE8890 Mycoplasma penetrans HF-2 excinuclease ABC subunit B NP_758276.1 1194933 R 272633 CDS NP_758277.1 26554343 1041395 complement(1196989..1197804) 1 NC_004432.1 hypothetical protein 1197804 1041395 MYPE8900 Mycoplasma penetrans HF-2 hypothetical protein NP_758277.1 1196989 R 272633 CDS NP_758278.1 26554344 1041407 complement(1197903..1200119) 1 NC_004432.1 ATP-dependent DNA helicase 1200119 1041407 MYPE8910 Mycoplasma penetrans HF-2 ATP-dependent DNA helicase NP_758278.1 1197903 R 272633 CDS NP_758279.1 26554345 1041404 complement(1200122..1200919) 1 NC_004432.1 hypothetical protein 1200919 1041404 MYPE8920 Mycoplasma penetrans HF-2 hypothetical protein NP_758279.1 1200122 R 272633 CDS NP_758280.1 26554346 1041421 complement(1200933..1201892) 1 NC_004432.1 glycosyltransferase 1201892 1041421 MYPE8930 Mycoplasma penetrans HF-2 glycosyltransferase NP_758280.1 1200933 R 272633 CDS NP_758281.1 26554347 1041418 complement(1201998..1202300) 1 NC_004432.1 hypothetical protein 1202300 1041418 MYPE8940 Mycoplasma penetrans HF-2 hypothetical protein NP_758281.1 1201998 R 272633 CDS NP_758282.1 26554348 1041382 complement(1202326..1203678) 1 NC_004432.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1203678 1041382 MYPE8950 Mycoplasma penetrans HF-2 leucyl aminopeptidase NP_758282.1 1202326 R 272633 CDS NP_758283.1 26554349 1041348 complement(1203839..1204546) 1 NC_004432.1 heat shock protein GrpE 1204546 1041348 MYPE8960 Mycoplasma penetrans HF-2 heat shock protein GrpE NP_758283.1 1203839 R 272633 CDS NP_758284.1 26554350 1041403 complement(1204550..1205716) 1 NC_004432.1 molecular chaperone DnaJ 1205716 1041403 MYPE8970 Mycoplasma penetrans HF-2 molecular chaperone DnaJ NP_758284.1 1204550 R 272633 CDS NP_758285.1 26554351 1041332 1206125..1206586 1 NC_004432.1 phosphotyrosine protein phosphatase 1206586 1041332 MYPE8980 Mycoplasma penetrans HF-2 phosphotyrosine protein phosphatase NP_758285.1 1206125 D 272633 CDS NP_758286.1 26554352 1041362 complement(1207053..1208093) 1 NC_004432.1 NADH-dependent flavin oxidoreductase 1208093 1041362 MYPE8990 Mycoplasma penetrans HF-2 NADH-dependent flavin oxidoreductase NP_758286.1 1207053 R 272633 CDS NP_758287.1 26554353 1041378 complement(1208453..1210129) 1 NC_004432.1 hypothetical protein 1210129 1041378 MYPE9000 Mycoplasma penetrans HF-2 hypothetical protein NP_758287.1 1208453 R 272633 CDS NP_758288.1 26554354 1041412 complement(1210287..1210808) 1 NC_004432.1 hypothetical protein 1210808 1041412 MYPE9010 Mycoplasma penetrans HF-2 hypothetical protein NP_758288.1 1210287 R 272633 CDS NP_758289.1 26554355 1041411 complement(1210894..1211712) 1 NC_004432.1 hypothetical protein 1211712 1041411 MYPE9020 Mycoplasma penetrans HF-2 hypothetical protein NP_758289.1 1210894 R 272633 CDS NP_758290.1 26554356 1041357 complement(1211705..1212268) 1 NC_004432.1 cysteinyl-tRNA synthetase 1212268 1041357 MYPE9030 Mycoplasma penetrans HF-2 cysteinyl-tRNA synthetase NP_758290.1 1211705 R 272633 CDS NP_758291.1 26554357 1041320 complement(1212412..1215537) 1 NC_004432.1 helicase/SNF2 domain-containing protein 1215537 1041320 MYPE9040 Mycoplasma penetrans HF-2 helicase/SNF2 domain-containing protein NP_758291.1 1212412 R 272633 CDS NP_758292.1 26554358 1041359 complement(1215586..1216449) 1 NC_004432.1 hypothetical protein 1216449 1041359 MYPE9050 Mycoplasma penetrans HF-2 hypothetical protein NP_758292.1 1215586 R 272633 CDS NP_758293.1 26554359 1041374 complement(1216451..1217578) 1 NC_004432.1 serine/threonine protein kinase 1217578 1041374 MYPE9060 Mycoplasma penetrans HF-2 serine/threonine protein kinase NP_758293.1 1216451 R 272633 CDS NP_758294.1 26554360 1041343 complement(1217816..1218340) 1 NC_004432.1 MYPE950 paralog; hypothetical protein 1218340 1041343 MYPE9070 Mycoplasma penetrans HF-2 hypothetical protein NP_758294.1 1217816 R 272633 CDS NP_758295.1 26554361 1041338 complement(1218609..1219076) 1 NC_004432.1 MYPE950 paralog; hypothetical protein 1219076 1041338 MYPE9080 Mycoplasma penetrans HF-2 hypothetical protein NP_758295.1 1218609 R 272633 CDS NP_758296.1 26554362 1041325 complement(1219638..1220195) 1 NC_004432.1 hypothetical protein 1220195 1041325 MYPE9090 Mycoplasma penetrans HF-2 hypothetical protein NP_758296.1 1219638 R 272633 CDS NP_758297.1 26554363 1041326 complement(1220198..1223056) 1 NC_004432.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 1223056 uvrA 1041326 uvrA Mycoplasma penetrans HF-2 excinuclease ABC subunit A NP_758297.1 1220198 R 272633 CDS NP_758298.1 26554364 1041350 complement(1223114..1225057) 1 NC_004432.1 similar to Pfam domain pertussis toxin S1subunit, PF02917; hypothetical protein 1225057 1041350 MYPE9110 Mycoplasma penetrans HF-2 hypothetical protein NP_758298.1 1223114 R 272633 CDS NP_758299.1 26554365 1041287 complement(1225077..1225574) 1 NC_004432.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 1225574 1041287 MYPE9120 Mycoplasma penetrans HF-2 flavodoxin FldA NP_758299.1 1225077 R 272633 CDS NP_758300.1 26554366 1041293 complement(1225787..1226152) 1 NC_004432.1 hypothetical protein 1226152 1041293 MYPE9130 Mycoplasma penetrans HF-2 hypothetical protein NP_758300.1 1225787 R 272633 CDS NP_758301.1 26554367 1041345 complement(1226351..1226698) 1 NC_004432.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1226698 rplT 1041345 rplT Mycoplasma penetrans HF-2 50S ribosomal protein L20 NP_758301.1 1226351 R 272633 CDS NP_758302.1 26554368 1041323 complement(1226940..1227452) 1 NC_004432.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1227452 infC 1041323 infC Mycoplasma penetrans HF-2 translation initiation factor IF-3 NP_758302.1 1226940 R 272633 CDS NP_758303.1 26554369 1041301 complement(1227840..1232216) 1 NC_004432.1 DNA polymerase III subunit alpha 1232216 1041301 MYPE9170 Mycoplasma penetrans HF-2 DNA polymerase III subunit alpha NP_758303.1 1227840 R 272633 CDS NP_758304.1 26554370 1041322 1232379..1232573 1 NC_004432.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1232573 rpsU 1041322 rpsU Mycoplasma penetrans HF-2 30S ribosomal protein S21 NP_758304.1 1232379 D 272633 CDS NP_758305.1 26554371 1041324 complement(1232631..1232876) 1 NC_004432.1 hypothetical protein 1232876 1041324 MYPE9190 Mycoplasma penetrans HF-2 hypothetical protein NP_758305.1 1232631 R 272633 CDS NP_758306.1 26554372 1041321 complement(1232950..1233129) 1 NC_004432.1 ribosomal protein L32 1233129 1041321 MYPE9200 Mycoplasma penetrans HF-2 ribosomal protein L32 NP_758306.1 1232950 R 272633 CDS NP_758307.1 26554373 1041290 complement(1238420..1241167) 1 NC_004432.1 hypothetical protein 1241167 1041290 MYPE9240 Mycoplasma penetrans HF-2 hypothetical protein NP_758307.1 1238420 R 272633 CDS NP_758308.1 26554374 1041291 1241422..1241991 1 NC_004432.1 hypothetical protein 1241991 1041291 MYPE9250 Mycoplasma penetrans HF-2 hypothetical protein NP_758308.1 1241422 D 272633 CDS NP_758309.1 26554375 1041292 complement(1242034..1244337) 1 NC_004432.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1244337 pheT 1041292 pheT Mycoplasma penetrans HF-2 phenylalanyl-tRNA synthetase subunit beta NP_758309.1 1242034 R 272633 CDS NP_758310.1 26554376 1041286 complement(1244414..1245439) 1 NC_004432.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1245439 pheS 1041286 pheS Mycoplasma penetrans HF-2 phenylalanyl-tRNA synthetase subunit alpha NP_758310.1 1244414 R 272633 CDS NP_758311.1 26554377 1041289 1245544..1246242 1 NC_004432.1 tRNA pseudouridine 5S synthase 1246242 1041289 MYPE9280 Mycoplasma penetrans HF-2 tRNA pseudouridine 5S synthase NP_758311.1 1245544 D 272633 CDS NP_758312.1 26554378 1041283 complement(1246239..1246694) 1 NC_004432.1 hypothetical protein 1246694 1041283 MYPE9290 Mycoplasma penetrans HF-2 hypothetical protein NP_758312.1 1246239 R 272633 CDS NP_758313.1 26554379 1041288 complement(1246704..1247549) 1 NC_004432.1 lipase 1247549 1041288 MYPE9300 Mycoplasma penetrans HF-2 lipase NP_758313.1 1246704 R 272633 CDS NP_758314.1 26554380 1041274 complement(1247562..1248431) 1 NC_004432.1 predicted bifunctional enzyme; riboflavin kinase-FAD synthetase 1248431 1041274 MYPE9310 Mycoplasma penetrans HF-2 riboflavin kinase-FAD synthetase NP_758314.1 1247562 R 272633 CDS NP_758315.1 26554381 1041279 complement(1248566..1249021) 1 NC_004432.1 hypothetical protein 1249021 1041279 MYPE9320 Mycoplasma penetrans HF-2 hypothetical protein NP_758315.1 1248566 R 272633 CDS NP_758316.1 26554382 1041281 complement(1249089..1250051) 1 NC_004432.1 thioredoxin reductase 1250051 1041281 MYPE9330 Mycoplasma penetrans HF-2 thioredoxin reductase NP_758316.1 1249089 R 272633 CDS NP_758317.1 26554383 1041282 complement(1250148..1250819) 1 NC_004432.1 phosphate transport system regulatory protein 1250819 1041282 MYPE9340 Mycoplasma penetrans HF-2 phosphate transport system regulatory protein NP_758317.1 1250148 R 272633 CDS NP_758318.1 26554384 1041278 complement(1250822..1251688) 1 NC_004432.1 MYPE3080 paralog; phosphate ABC transporter permease PstB 1251688 1041278 MYPE9350 Mycoplasma penetrans HF-2 phosphate ABC transporter permease PstB NP_758318.1 1250822 R 272633 CDS NP_758319.1 26554385 1041276 complement(1251706..1253721) 1 NC_004432.1 phosphate ABC transporter permease PstA 1253721 1041276 MYPE9360 Mycoplasma penetrans HF-2 phosphate ABC transporter permease PstA NP_758319.1 1251706 R 272633 CDS NP_758320.1 26554386 1041270 complement(1253728..1254930) 1 NC_004432.1 phosphate binding protein PstS 1254930 1041270 MYPE9370 Mycoplasma penetrans HF-2 phosphate binding protein PstS NP_758320.1 1253728 R 272633 CDS NP_758321.1 26554387 1041273 complement(1255108..1258371) 1 NC_004432.1 methionyl-tRNA synthetase 1258371 1041273 MYPE9380 Mycoplasma penetrans HF-2 methionyl-tRNA synthetase NP_758321.1 1255108 R 272633 CDS NP_758322.1 26554388 1041268 complement(1258364..1261099) 1 NC_004432.1 phosphoenolpyruvate carboxylase 1261099 1041268 MYPE9390 Mycoplasma penetrans HF-2 phosphoenolpyruvate carboxylase NP_758322.1 1258364 R 272633 CDS NP_758323.1 26554389 1041280 1261211..1262299 1 NC_004432.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1262299 ispG 1041280 ispG Mycoplasma penetrans HF-2 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase NP_758323.1 1261211 D 272633 CDS NP_758324.1 26554390 1041269 1262302..1262892 1 NC_004432.1 hypothetical protein 1262892 1041269 MYPE9410 Mycoplasma penetrans HF-2 hypothetical protein NP_758324.1 1262302 D 272633 CDS NP_758325.1 26554391 1041275 1262904..1263986 1 NC_004432.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1263986 1041275 MYPE9420 Mycoplasma penetrans HF-2 nicotinate phosphoribosyltransferase NP_758325.1 1262904 D 272633 CDS NP_758326.1 26554392 1041272 complement(1263983..1265659) 1 NC_004432.1 hypothetical protein 1265659 1041272 MYPE9430 Mycoplasma penetrans HF-2 hypothetical protein NP_758326.1 1263983 R 272633 CDS NP_758327.1 26554393 1041285 complement(1265831..1266388) 1 NC_004432.1 nucleotidyltransferase 1266388 1041285 MYPE9440 Mycoplasma penetrans HF-2 nucleotidyltransferase NP_758327.1 1265831 R 272633 CDS NP_758328.1 26554394 1041284 complement(1266376..1267374) 1 NC_004432.1 phosphoribosylpyrophosphate synthetase 1267374 1041284 MYPE9450 Mycoplasma penetrans HF-2 phosphoribosylpyrophosphate synthetase NP_758328.1 1266376 R 272633 CDS NP_758329.1 26554395 1041266 complement(1267458..1268120) 1 NC_004432.1 ribonuclease H-related protein 1268120 1041266 MYPE9460 Mycoplasma penetrans HF-2 ribonuclease H-related protein NP_758329.1 1267458 R 272633 CDS NP_758330.1 26554396 1041267 complement(1268169..1268954) 1 NC_004432.1 hypothetical protein 1268954 1041267 MYPE9470 Mycoplasma penetrans HF-2 hypothetical protein NP_758330.1 1268169 R 272633 CDS NP_758331.1 26554397 1041271 complement(1269032..1269847) 1 NC_004432.1 choline kinase 1269847 1041271 MYPE9480 Mycoplasma penetrans HF-2 choline kinase NP_758331.1 1269032 R 272633 CDS NP_758332.1 26554398 1041263 complement(1269938..1271803) 1 NC_004432.1 molecular chaperone DnaK 1271803 1041263 MYPE9490 Mycoplasma penetrans HF-2 molecular chaperone DnaK NP_758332.1 1269938 R 272633 CDS NP_758333.1 26554399 1041265 1271891..1272748 1 NC_004432.1 aldo/keto reductase family, MYPE4720 paralog; oxidoreductase 1272748 1041265 MYPE9500 Mycoplasma penetrans HF-2 oxidoreductase NP_758333.1 1271891 D 272633 CDS NP_758334.1 26554400 1041264 complement(1272807..1273169) 1 NC_004432.1 hypothetical protein 1273169 1041264 MYPE9510 Mycoplasma penetrans HF-2 hypothetical protein NP_758334.1 1272807 R 272633 CDS NP_758335.1 26554401 1041277 complement(1273174..1275345) 1 NC_004432.1 hypothetical protein 1275345 1041277 MYPE9520 Mycoplasma penetrans HF-2 hypothetical protein NP_758335.1 1273174 R 272633 CDS NP_758336.1 26554402 1041262 1275510..1276583 1 NC_004432.1 DNA polymerase III 1276583 1041262 MYPE9530 Mycoplasma penetrans HF-2 DNA polymerase III NP_758336.1 1275510 D 272633 CDS NP_758337.1 26554403 1041259 complement(1276623..1277786) 1 NC_004432.1 CDP-diglyceride synthetase 1277786 1041259 MYPE9540 Mycoplasma penetrans HF-2 CDP-diglyceride synthetase NP_758337.1 1276623 R 272633 CDS NP_758338.1 26554404 1041260 complement(1277868..1278545) 1 NC_004432.1 undecaprenyl diphosphate synthase 1278545 1041260 MYPE9550 Mycoplasma penetrans HF-2 undecaprenyl diphosphate synthase NP_758338.1 1277868 R 272633 CDS NP_758339.1 26554405 1041261 complement(1278547..1279098) 1 NC_004432.1 ribosome recycling factor 1279098 1041261 MYPE9560 Mycoplasma penetrans HF-2 ribosome recycling factor NP_758339.1 1278547 R 272633 CDS NP_758340.1 26554406 1041256 complement(1279127..1280080) 1 NC_004432.1 uridylate kinase 1280080 1041256 MYPE9570 Mycoplasma penetrans HF-2 uridylate kinase NP_758340.1 1279127 R 272633 CDS NP_758341.1 26554407 1041255 complement(1280134..1281012) 1 NC_004432.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1281012 tsf 1041255 tsf Mycoplasma penetrans HF-2 elongation factor Ts NP_758341.1 1280134 R 272633 CDS NP_758342.1 26554408 1041258 complement(1281224..1282204) 1 NC_004432.1 paralog family, predicted integral membrane protein; hypothetical protein 1282204 1041258 MYPE9600 Mycoplasma penetrans HF-2 hypothetical protein NP_758342.1 1281224 R 272633 CDS NP_758343.1 26554409 1041242 complement(1282338..1282670) 1 NC_004432.1 MYPE9600 paralog :C-terminal; hypothetical protein 1282670 1041242 MYPE9610 Mycoplasma penetrans HF-2 hypothetical protein NP_758343.1 1282338 R 272633 CDS NP_758344.1 26554410 1041257 complement(1282913..1284121) 1 NC_004432.1 transposase 1284121 1041257 MYPE9620 Mycoplasma penetrans HF-2 transposase NP_758344.1 1282913 R 272633 CDS NP_758345.1 26554411 1041243 complement(1284157..1284693) 1 NC_004432.1 MYPE9600 paralog :N-terminal; hypothetical protein 1284693 1041243 MYPE9630 Mycoplasma penetrans HF-2 hypothetical protein NP_758345.1 1284157 R 272633 CDS NP_758346.1 26554412 1041245 complement(1284919..1285866) 1 NC_004432.1 L-lactate dehydrogenase 1285866 1041245 MYPE9640 Mycoplasma penetrans HF-2 L-lactate dehydrogenase NP_758346.1 1284919 R 272633 CDS NP_758347.1 26554413 1041236 complement(1285856..1286308) 1 NC_004432.1 lipopolysaccharide biosynthesis enzyme KdtB 1286308 1041236 MYPE9650 Mycoplasma penetrans HF-2 lipopolysaccharide biosynthesis enzyme KdtB NP_758347.1 1285856 R 272633 CDS NP_758348.1 26554414 1041229 complement(1286361..1287464) 1 NC_004432.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1287464 rpsB 1041229 rpsB Mycoplasma penetrans HF-2 30S ribosomal protein S2 NP_758348.1 1286361 R 272633 CDS NP_758349.1 26554415 1041232 1287783..1288424 1 NC_004432.1 GntR family transcriptional regulator 1288424 1041232 MYPE9670 Mycoplasma penetrans HF-2 GntR family transcriptional regulator NP_758349.1 1287783 D 272633 CDS NP_758350.1 26554416 1041231 1288515..1290821 1 NC_004432.1 PTS system sucrose-specific IIABC component 1290821 1041231 MYPE9680 Mycoplasma penetrans HF-2 PTS system sucrose-specific IIABC component NP_758350.1 1288515 D 272633 CDS NP_758351.1 26554417 1041227 1290867..1292231 1 NC_004432.1 sucrose-6-phosphate hydrolase 1292231 1041227 MYPE9690 Mycoplasma penetrans HF-2 sucrose-6-phosphate hydrolase NP_758351.1 1290867 D 272633 CDS NP_758352.1 26554418 1041237 1292235..1293119 1 NC_004432.1 glucose kinase or transcriptional regulator 1293119 1041237 MYPE9700 Mycoplasma penetrans HF-2 glucose kinase or transcriptional regulator NP_758352.1 1292235 D 272633 CDS NP_758353.1 26554419 1041160 1293280..1294512 1 NC_004432.1 hypothetical protein 1294512 1041160 MYPE9710 Mycoplasma penetrans HF-2 hypothetical protein NP_758353.1 1293280 D 272633 CDS NP_758354.1 26554420 1041166 complement(1294694..1295083) 1 NC_004432.1 hypothetical protein 1295083 1041166 MYPE9720 Mycoplasma penetrans HF-2 hypothetical protein NP_758354.1 1294694 R 272633 CDS NP_758355.1 26554421 1041228 complement(1295149..1295319) 1 NC_004432.1 hypothetical protein 1295319 1041228 MYPE9730 Mycoplasma penetrans HF-2 hypothetical protein NP_758355.1 1295149 R 272633 CDS NP_758356.1 26554422 1041168 complement(1295429..1296154) 1 NC_004432.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1296154 truA 1041168 truA Mycoplasma penetrans HF-2 tRNA pseudouridine synthase A NP_758356.1 1295429 R 272633 CDS NP_758357.1 26554423 1041197 complement(1296165..1297358) 1 NC_004432.1 cobalt transport membrane protein 1297358 1041197 MYPE9750 Mycoplasma penetrans HF-2 cobalt transport membrane protein NP_758357.1 1296165 R 272633 CDS NP_758358.1 26554424 1041190 complement(1297444..1298664) 1 NC_004432.1 with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 1298664 cbiO 1041190 cbiO Mycoplasma penetrans HF-2 cobalt transporter ATP-binding subunit NP_758358.1 1297444 R 272633 CDS NP_758359.1 26554425 1041167 complement(1298649..1299512) 1 NC_004432.1 with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 1299512 cbiO 1041167 cbiO Mycoplasma penetrans HF-2 cobalt transporter ATP-binding subunit NP_758359.1 1298649 R 272633 CDS NP_758360.1 26554426 1041225 1299733..1300749 1 NC_004432.1 IS1630-like transposase 1300749 1041225 MYPE9780 Mycoplasma penetrans HF-2 IS1630-like transposase NP_758360.1 1299733 D 272633 CDS NP_758361.1 26554427 1041156 complement(1301030..1302136) 1 NC_004432.1 similar to endonuclease; hypothetical protein 1302136 1041156 MYPE9790 Mycoplasma penetrans HF-2 hypothetical protein NP_758361.1 1301030 R 272633 CDS NP_758362.1 26554428 1041154 complement(1302153..1303433) 1 NC_004432.1 cytosine-specific DNA methylase 1303433 1041154 MYPE9800 Mycoplasma penetrans HF-2 cytosine-specific DNA methylase NP_758362.1 1302153 R 272633 CDS NP_758363.1 26554429 1041222 complement(1303628..1304566) 1 NC_004432.1 hypothetical protein 1304566 1041222 MYPE9810 Mycoplasma penetrans HF-2 hypothetical protein NP_758363.1 1303628 R 272633 CDS NP_758364.1 26554430 1041159 complement(1304594..1306759) 1 NC_004432.1 hypothetical protein 1306759 1041159 MYPE9820 Mycoplasma penetrans HF-2 hypothetical protein NP_758364.1 1304594 R 272633 CDS NP_758365.1 26554431 1041165 complement(1306761..1308293) 1 NC_004432.1 hypothetical protein 1308293 1041165 MYPE9830 Mycoplasma penetrans HF-2 hypothetical protein NP_758365.1 1306761 R 272633 CDS NP_758366.1 26554432 1041164 complement(1308740..1308988) 1 NC_004432.1 paralog of MYPE9860 and MYPE8270; hypothetical protein 1308988 1041164 MYPE9840 Mycoplasma penetrans HF-2 hypothetical protein NP_758366.1 1308740 R 272633 CDS NP_758367.1 26554433 1041161 complement(1309225..1309395) 1 NC_004432.1 paralog of MYPE9860 and MYPE8270; hypothetical protein 1309395 1041161 MYPE9850 Mycoplasma penetrans HF-2 hypothetical protein NP_758367.1 1309225 R 272633 CDS NP_758368.1 26554434 1041163 complement(1309632..1309973) 1 NC_004432.1 MYPE8270 paralog; hypothetical protein 1309973 1041163 MYPE9860 Mycoplasma penetrans HF-2 hypothetical protein NP_758368.1 1309632 R 272633 CDS NP_758369.1 26554435 1041162 complement(1310322..1311140) 1 NC_004432.1 short-chain alcohol dehydrogenase family enzyme 1311140 1041162 MYPE9870 Mycoplasma penetrans HF-2 short-chain alcohol dehydrogenase family enzyme NP_758369.1 1310322 R 272633 CDS NP_758370.1 26554436 1041145 complement(1311133..1311744) 1 NC_004432.1 hypothetical protein 1311744 1041145 MYPE9880 Mycoplasma penetrans HF-2 hypothetical protein NP_758370.1 1311133 R 272633 CDS NP_758371.1 26554437 1041146 complement(1311717..1313186) 1 NC_004432.1 aminopeptidase 1313186 1041146 MYPE9890 Mycoplasma penetrans HF-2 aminopeptidase NP_758371.1 1311717 R 272633 CDS NP_758372.1 26554438 1041141 complement(1313188..1314732) 1 NC_004432.1 aminopeptidase 1314732 1041141 MYPE9900 Mycoplasma penetrans HF-2 aminopeptidase NP_758372.1 1313188 R 272633 CDS NP_758373.1 26554439 1041153 complement(1314801..1315160) 1 NC_004432.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1315160 rplQ 1041153 rplQ Mycoplasma penetrans HF-2 50S ribosomal protein L17 NP_758373.1 1314801 R 272633 CDS NP_758374.1 26554440 1041158 complement(1315171..1316166) 1 NC_004432.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1316166 1041158 MYPE9920 Mycoplasma penetrans HF-2 DNA-directed RNA polymerase subunit alpha NP_758374.1 1315171 R 272633 CDS NP_758375.1 26554441 1041157 complement(1316181..1316552) 1 NC_004432.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1316552 1041157 MYPE9930 Mycoplasma penetrans HF-2 30S ribosomal protein S11 NP_758375.1 1316181 R 272633 CDS NP_758376.1 26554442 1041155 complement(1316568..1316942) 1 NC_004432.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1316942 rpsM 1041155 rpsM Mycoplasma penetrans HF-2 30S ribosomal protein S13 NP_758376.1 1316568 R 272633 CDS NP_758377.1 26554443 1041152 complement(1317093..1317311) 1 NC_004432.1 translation initiation factor IF-1 1317311 1041152 MYPE9950 Mycoplasma penetrans HF-2 translation initiation factor IF-1 NP_758377.1 1317093 R 272633 CDS NP_758378.1 26554444 1041125 complement(1317319..1318059) 1 NC_004432.1 methionine aminopeptidase 1318059 1041125 MYPE9960 Mycoplasma penetrans HF-2 methionine aminopeptidase NP_758378.1 1317319 R 272633 CDS NP_758379.1 26554445 1041116 complement(1318062..1318709) 1 NC_004432.1 adenylate kinase 1318709 1041116 MYPE9970 Mycoplasma penetrans HF-2 adenylate kinase NP_758379.1 1318062 R 272633 CDS NP_758380.1 26554446 1041144 complement(1318721..1320142) 1 NC_004432.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1320142 secY 1041144 secY Mycoplasma penetrans HF-2 preprotein translocase subunit SecY NP_758380.1 1318721 R 272633 CDS NP_758381.1 26554447 1041151 complement(1320166..1320609) 1 NC_004432.1 late assembly protein; 50S ribosomal protein L15 1320609 rplO 1041151 rplO Mycoplasma penetrans HF-2 50S ribosomal protein L15 NP_758381.1 1320166 R 272633 CDS NP_758382.1 26554448 1041150 complement(1320613..1321317) 1 NC_004432.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1321317 rpsE 1041150 rpsE Mycoplasma penetrans HF-2 30S ribosomal protein S5 NP_758382.1 1320613 R 272633 CDS NP_758383.1 26554449 1041147 complement(1321339..1321698) 1 NC_004432.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1321698 rplR 1041147 rplR Mycoplasma penetrans HF-2 50S ribosomal protein L18 NP_758383.1 1321339 R 272633 CDS NP_758384.1 26554450 1041143 complement(1321714..1322265) 1 NC_004432.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1322265 rplF 1041143 rplF Mycoplasma penetrans HF-2 50S ribosomal protein L6 NP_758384.1 1321714 R 272633 CDS NP_758385.1 26554451 1041119 complement(1322276..1322671) 1 NC_004432.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1322671 rpsH 1041119 rpsH Mycoplasma penetrans HF-2 30S ribosomal protein S8 NP_758385.1 1322276 R 272633 CDS NP_758386.1 26554452 1041114 complement(1322688..1322873) 1 NC_004432.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 1322873 rpsN 1041114 rpsN Mycoplasma penetrans HF-2 30S ribosomal protein S14 NP_758386.1 1322688 R 272633 CDS NP_758387.1 26554453 1041124 complement(1322875..1323438) 1 NC_004432.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1323438 rplE 1041124 rplE Mycoplasma penetrans HF-2 50S ribosomal protein L5 NP_758387.1 1322875 R 272633 CDS NP_758388.1 26554454 1041123 complement(1323447..1323770) 1 NC_004432.1 ribosomal protein L24 1323770 1041123 MYPE10060 Mycoplasma penetrans HF-2 ribosomal protein L24 NP_758388.1 1323447 R 272633 CDS NP_758389.1 26554455 1041142 complement(1323783..1324151) 1 NC_004432.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1324151 rplN 1041142 rplN Mycoplasma penetrans HF-2 50S ribosomal protein L14 NP_758389.1 1323783 R 272633 CDS NP_758390.1 26554456 1041108 complement(1324182..1324457) 1 NC_004432.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1324457 rpsQ 1041108 rpsQ Mycoplasma penetrans HF-2 30S ribosomal protein S17 NP_758390.1 1324182 R 272633 CDS NP_758391.1 26554457 1041139 complement(1324476..1325729) 1 NC_004432.1 30S ribosomal protein S3 1325729 1041139 MYPE10090 Mycoplasma penetrans HF-2 30S ribosomal protein S3 NP_758391.1 1324476 R 272633 CDS NP_758392.1 26554458 1041129 complement(1325732..1326466) 1 NC_004432.1 ribosomal protein L29 1326466 1041129 MYPE10100 Mycoplasma penetrans HF-2 ribosomal protein L29 NP_758392.1 1325732 R 272633 CDS NP_758393.1 26554459 1041088 complement(1326453..1326875) 1 NC_004432.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1326875 rplP 1041088 rplP Mycoplasma penetrans HF-2 50S ribosomal protein L16 NP_758393.1 1326453 R 272633 CDS NP_758394.1 26554460 1041107 complement(1326898..1327923) 1 NC_004432.1 fusion of L22 and COG4933; 50S ribosomal protein L22 1327923 1041107 MYPE10120 Mycoplasma penetrans HF-2 50S ribosomal protein L22 NP_758394.1 1326898 R 272633 CDS NP_758395.1 26554461 1041117 complement(1327941..1328174) 1 NC_004432.1 ribosomal protein S19 1328174 1041117 MYPE10130 Mycoplasma penetrans HF-2 ribosomal protein S19 NP_758395.1 1327941 R 272633 CDS NP_758396.1 26554462 1041121 complement(1328232..1329071) 1 NC_004432.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1329071 rplB 1041121 rplB Mycoplasma penetrans HF-2 50S ribosomal protein L2 NP_758396.1 1328232 R 272633 CDS NP_758397.1 26554463 1041091 complement(1329106..1329522) 1 NC_004432.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1329522 rplW 1041091 rplW Mycoplasma penetrans HF-2 50S ribosomal protein L23 NP_758397.1 1329106 R 272633 CDS NP_758398.1 26554464 1041103 complement(1329522..1330163) 1 NC_004432.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1330163 rplD 1041103 rplD Mycoplasma penetrans HF-2 50S ribosomal protein L4 NP_758398.1 1329522 R 272633 CDS NP_758399.2 161723281 1041106 complement(1330163..1331095) 1 NC_004432.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1331095 rplC 1041106 rplC Mycoplasma penetrans HF-2 50S ribosomal protein L3 NP_758399.2 1330163 R 272633 CDS NP_758400.1 26554466 1041122 complement(1331115..1331504) 1 NC_004432.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1331504 rpsJ 1041122 rpsJ Mycoplasma penetrans HF-2 30S ribosomal protein S10 NP_758400.1 1331115 R 272633 CDS NP_758401.1 26554467 1041078 complement(1331694..1332524) 1 NC_004432.1 haloacid dehalogenase 1332524 1041078 MYPE10200 Mycoplasma penetrans HF-2 haloacid dehalogenase NP_758401.1 1331694 R 272633 CDS NP_758402.1 26554468 1041086 complement(1332546..1333313) 1 NC_004432.1 similar to Pfam domain Bvg accessory factor PF03309; transcriptional regulator 1333313 1041086 MYPE10210 Mycoplasma penetrans HF-2 transcriptional regulator NP_758402.1 1332546 R 272633 CDS NP_758403.1 26554469 1041102 complement(1333337..1333993) 1 NC_004432.1 ribonuclease HII 1333993 1041102 MYPE10220 Mycoplasma penetrans HF-2 ribonuclease HII NP_758403.1 1333337 R 272633 CDS NP_758404.1 26554470 1041079 complement(1334047..1334565) 1 NC_004432.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1334565 1041079 MYPE10230 Mycoplasma penetrans HF-2 adenine phosphoribosyltransferase NP_758404.1 1334047 R 272633 CDS NP_758405.1 26554471 1041082 complement(1334575..1337958) 1 NC_004432.1 protein-export membrane protein SecD 1337958 1041082 MYPE10240 Mycoplasma penetrans HF-2 protein-export membrane protein SecD NP_758405.1 1334575 R 272633 CDS NP_758406.1 26554472 1041087 complement(1338074..1340542) 1 NC_004432.1 cell division protein FtsH 1340542 1041087 MYPE10250 Mycoplasma penetrans HF-2 cell division protein FtsH NP_758406.1 1338074 R 272633 CDS NP_758407.1 26554473 1041111 complement(1340596..1341129) 1 NC_004432.1 hypoxanthine-guanine phosphoribosyltransferase 1341129 1041111 MYPE10260 Mycoplasma penetrans HF-2 hypoxanthine-guanine phosphoribosyltransferase NP_758407.1 1340596 R 272633 CDS NP_758408.1 26554474 1041110 complement(1341227..1341724) 1 NC_004432.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1341724 ispF 1041110 ispF Mycoplasma penetrans HF-2 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NP_758408.1 1341227 R 272633 CDS NP_758409.1 26554475 1041077 complement(1341772..1342632) 1 NC_004432.1 MYPE3080 paralog; ABC transporter ATP-binding protein 1342632 1041077 MYPE10280 Mycoplasma penetrans HF-2 ABC transporter ATP-binding protein NP_758409.1 1341772 R 272633 CDS NP_758410.1 26554476 1041065 complement(1342637..1347094) 1 NC_004432.1 ABC transporter membrane protein 1347094 1041065 MYPE10290 Mycoplasma penetrans HF-2 ABC transporter membrane protein NP_758410.1 1342637 R 272633 CDS NP_758411.1 26554477 1041090 1347248..1347868 1 NC_004432.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1347868 upp 1041090 upp Mycoplasma penetrans HF-2 uracil phosphoribosyltransferase NP_758411.1 1347248 D 272633 CDS NP_758412.1 26554478 1041066 complement(1347932..1349068) 1 NC_004432.1 guanosine 5'-monophosphate oxidoreductase 1349068 1041066 MYPE10310 Mycoplasma penetrans HF-2 guanosine 5'-monophosphate oxidoreductase NP_758412.1 1347932 R 272633 CDS NP_758413.1 26554479 1041069 complement(1349097..1349759) 1 NC_004432.1 thymidine kinase 1349759 1041069 MYPE10320 Mycoplasma penetrans HF-2 thymidine kinase NP_758413.1 1349097 R 272633 CDS NP_758414.1 26554480 1041075 complement(1349771..1350868) 1 NC_004432.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1350868 1041075 MYPE10330 Mycoplasma penetrans HF-2 GTP-dependent nucleic acid-binding protein EngD NP_758414.1 1349771 R 272633 CDS NP_758415.1 26554481 1041094 complement(1350944..1351834) 1 NC_004432.1 fructose-bisphosphate aldolase 1351834 1041094 MYPE10340 Mycoplasma penetrans HF-2 fructose-bisphosphate aldolase NP_758415.1 1350944 R 272633 CDS NP_758416.1 26554482 1041093 complement(1351913..1352425) 1 NC_004432.1 participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta 1352425 1041093 MYPE10350 Mycoplasma penetrans HF-2 DNA-directed RNA polymerase subunit delta NP_758416.1 1351913 R 272633 CDS NP_758417.1 26554483 1041067 complement(1352460..1353731) 1 NC_004432.1 hypothetical protein 1353731 1041067 MYPE10360 Mycoplasma penetrans HF-2 hypothetical protein NP_758417.1 1352460 R 272633 CDS NP_758418.1 26554484 1041059 complement(1353732..1355195) 1 NC_004432.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1355195 gltX 1041059 gltX Mycoplasma penetrans HF-2 glutamyl-tRNA synthetase NP_758418.1 1353732 R 272633 CDS NP_758419.1 26554485 1041074 complement(1355211..1355996) 1 NC_004432.1 hypothetical protein 1355996 1041074 MYPE10380 Mycoplasma penetrans HF-2 hypothetical protein NP_758419.1 1355211 R 272633 CDS NP_758420.1 26554486 1041062 complement(1355977..1356795) 1 NC_004432.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1356795 ksgA 1041062 ksgA Mycoplasma penetrans HF-2 dimethyladenosine transferase NP_758420.1 1355977 R 272633 CDS NP_758421.1 26554487 1041064 complement(1356802..1357941) 1 NC_004432.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 1357941 1041064 MYPE10400 Mycoplasma penetrans HF-2 inner membrane protein translocase component YidC NP_758421.1 1356802 R 272633 CDS NP_758422.1 26554488 1041063 complement(1357973..1358308) 1 NC_004432.1 ribonuclease P protein component 1358308 1041063 MYPE10410 Mycoplasma penetrans HF-2 ribonuclease P protein component NP_758422.1 1357973 R 272633 CDS NP_758423.1 26554489 1041081 complement(1358320..1358463) 1 NC_004432.1 ribosomal protein L34 1358463 1041081 MYPE10420 Mycoplasma penetrans HF-2 ribosomal protein L34 NP_758423.1 1358320 R 272633 CDS