-- dump date 20240506_001612 -- class Genbank::Contig -- table contig_comment -- id comment NC_019792.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003377.1.REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain AndersonREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: KenyaREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh waterREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, KenyaREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: HalophileREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111 CDSs (without protein) :: 111REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111 CDSs (without protein) :: 111 Pseudo Genes (ambiguous residues) :: 0 of 111REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111 CDSs (without protein) :: 111 Pseudo Genes (ambiguous residues) :: 0 of 111 Pseudo Genes (frameshifted) :: 44 of 111REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111 CDSs (without protein) :: 111 Pseudo Genes (ambiguous residues) :: 0 of 111 Pseudo Genes (frameshifted) :: 44 of 111 Pseudo Genes (incomplete) :: 71 of 111REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111 CDSs (without protein) :: 111 Pseudo Genes (ambiguous residues) :: 0 of 111 Pseudo Genes (frameshifted) :: 44 of 111 Pseudo Genes (incomplete) :: 71 of 111 Pseudo Genes (internal stop) :: 29 of 111REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111 CDSs (without protein) :: 111 Pseudo Genes (ambiguous residues) :: 0 of 111 Pseudo Genes (frameshifted) :: 44 of 111 Pseudo Genes (incomplete) :: 71 of 111 Pseudo Genes (internal stop) :: 29 of 111 Pseudo Genes (multiple problems) :: 29 of 111REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111 CDSs (without protein) :: 111 Pseudo Genes (ambiguous residues) :: 0 of 111 Pseudo Genes (frameshifted) :: 44 of 111 Pseudo Genes (incomplete) :: 71 of 111 Pseudo Genes (internal stop) :: 29 of 111 Pseudo Genes (multiple problems) :: 29 of 111 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111 CDSs (without protein) :: 111 Pseudo Genes (ambiguous residues) :: 0 of 111 Pseudo Genes (frameshifted) :: 44 of 111 Pseudo Genes (incomplete) :: 71 of 111 Pseudo Genes (internal stop) :: 29 of 111 Pseudo Genes (multiple problems) :: 29 of 111 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003377.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4091193 Source DNA and organism available from Iain Anderson (IJAnderson@lbl.gov) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Natronobacterium gregoryi SP2 collection_date :: Missing lat_lon :: -1.9446 36.2522 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Lake, Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 43098, CCM 3738, NCMB 2189, DSM 3393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi06000 Type Strain :: Yes Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Lake Magadi, Kenya Temperature Range :: Mesophile Salinity :: Halophile Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000230715.2-RS_2024_04_26 Annotation Date :: 04/26/2024 00:52:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,758 CDSs (total) :: 3,698 Genes (coding) :: 3,587 CDSs (with protein) :: 3,587 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 111 CDSs (without protein) :: 111 Pseudo Genes (ambiguous residues) :: 0 of 111 Pseudo Genes (frameshifted) :: 44 of 111 Pseudo Genes (incomplete) :: 71 of 111 Pseudo Genes (internal stop) :: 29 of 111 Pseudo Genes (multiple problems) :: 29 of 111 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.