-- dump date 20140619_164510 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_840102.1 30248032 1081071 211..1590 1 NC_004757.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1590 dnaA 1081071 dnaA Nitrosomonas europaea ATCC 19718 chromosomal replication initiation protein NP_840102.1 211 D 228410 CDS NP_840103.1 30248033 1081072 1791..2912 1 NC_004757.1 DNA polymerase III subunit beta 2912 dnaN 1081072 dnaN Nitrosomonas europaea ATCC 19718 DNA polymerase III subunit beta NP_840103.1 1791 D 228410 CDS NP_840104.1 30248034 1081074 2961..5390 1 NC_004757.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 5390 gyrB 1081074 gyrB Nitrosomonas europaea ATCC 19718 DNA gyrase subunit B NP_840104.1 2961 D 228410 CDS NP_840105.1 30248035 1083543 5413..5856 1 NC_004757.1 hypothetical protein 5856 1083543 NE0004 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840105.1 5413 D 228410 CDS NP_840106.1 30248036 1081078 5907..6638 1 NC_004757.1 16S pseudouridylate synthase 6638 1081078 NE0005 Nitrosomonas europaea ATCC 19718 16S pseudouridylate synthase NP_840106.1 5907 D 228410 CDS NP_840107.1 30248037 1081087 7350..7673 1 NC_004757.1 7Fe ferredoxin 7673 fdxA 1081087 fdxA Nitrosomonas europaea ATCC 19718 7Fe ferredoxin NP_840107.1 7350 D 228410 CDS NP_840108.1 30248038 1082289 7717..8076 1 NC_004757.1 hypothetical protein 8076 1082289 NE0007 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840108.1 7717 D 228410 CDS NP_840109.1 30248039 1081088 complement(8100..11564) 1 NC_004757.1 mfd: transcription-repair coupling factor 11564 mfd 1081088 mfd Nitrosomonas europaea ATCC 19718 mfd: transcription-repair coupling factor NP_840109.1 8100 R 228410 CDS NP_840110.1 30248040 1083544 complement(11591..12892) 1 NC_004757.1 MgtC family membrane protein 12892 1083544 NE0009 Nitrosomonas europaea ATCC 19718 MgtC family membrane protein NP_840110.1 11591 R 228410 CDS NP_840111.1 30248041 1081014 complement(12864..14627) 1 NC_004757.1 recJ: single-stranded-DNA-specific exonuclease 14627 recJ 1081014 recJ Nitrosomonas europaea ATCC 19718 recJ: single-stranded-DNA-specific exonuclease NP_840111.1 12864 R 228410 CDS NP_840112.1 30248042 1081013 complement(14771..15367) 1 NC_004757.1 similar to cytochrome P460 precursor - Nitrosomonas europaea gb|AAA62668.1| (U15305) cytochrome P460 precursor [Nitrosomonas europaea], evalue=1.00e-112; cytochrome P460 15367 cyp 1081013 cyp Nitrosomonas europaea ATCC 19718 cytochrome P460 NP_840112.1 14771 R 228410 CDS NP_840113.1 30248043 1081005 complement(15451..16371) 1 NC_004757.1 indole-3-glycerol phosphate synthase 16371 trpC 1081005 trpC Nitrosomonas europaea ATCC 19718 indole-3-glycerol phosphate synthase NP_840113.1 15451 R 228410 CDS NP_840114.1 30248044 1081001 complement(16373..17398) 1 NC_004757.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 17398 trpD 1081001 trpD Nitrosomonas europaea ATCC 19718 anthranilate phosphoribosyltransferase NP_840114.1 16373 R 228410 CDS NP_840115.1 30248045 1081056 complement(17395..17994) 1 NC_004757.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 17994 trpG 1081056 trpG Nitrosomonas europaea ATCC 19718 anthranilate synthase component II NP_840115.1 17395 R 228410 CDS NP_840116.1 30248046 1083210 18115..19614 1 NC_004757.1 sensory transduction histidine kinase 19614 yfhK 1083210 yfhK Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_840116.1 18115 D 228410 CDS NP_840117.1 30248047 1081057 19611..20153 1 NC_004757.1 hypothetical protein 20153 1081057 NE0016 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840117.1 19611 D 228410 CDS NP_840118.1 30248048 1081061 20166..21533 1 NC_004757.1 transcriptional regulator of two-component regulator protein 21533 yfhA 1081061 yfhA Nitrosomonas europaea ATCC 19718 transcriptional regulator of two-component regulator protein NP_840118.1 20166 D 228410 CDS NP_840119.1 30248049 1081059 complement(21543..22748) 1 NC_004757.1 PDZ domain-containing protein 22748 1081059 NE0018 Nitrosomonas europaea ATCC 19718 PDZ domain-containing protein NP_840119.1 21543 R 228410 CDS NP_840120.1 30248050 1082396 complement(22874..26788) 1 NC_004757.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 26788 purL 1082396 purL Nitrosomonas europaea ATCC 19718 phosphoribosylformylglycinamidine synthase NP_840120.1 22874 R 228410 CDS NP_840121.1 30248051 1081062 26860..28377 1 NC_004757.1 COGS group COG0063, predicted sugar kinase, evalue=8e-37; sugar kinase 28377 1081062 NE0020 Nitrosomonas europaea ATCC 19718 sugar kinase NP_840121.1 26860 D 228410 CDS NP_840122.1 30248052 1081064 28652..29176 1 NC_004757.1 hypothetical protein 29176 1081064 NE0021 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840122.1 28652 D 228410 CDS NP_840123.1 30248053 1081753 complement(29244..30401) 1 NC_004757.1 alanine dehydrogenase 30401 1081753 NE0022 Nitrosomonas europaea ATCC 19718 alanine dehydrogenase NP_840123.1 29244 R 228410 CDS NP_840124.1 30248054 1081066 complement(30420..31184) 1 NC_004757.1 exodeoxyribonuclease III:exodeoxyribonuclease III xth 31184 xthA1 1081066 xthA1 Nitrosomonas europaea ATCC 19718 exodeoxyribonuclease III:exodeoxyribonuclease III xth NP_840124.1 30420 R 228410 CDS NP_840125.1 30248055 1081067 31294..31662 1 NC_004757.1 cytochrome c, class I 31662 1081067 NE0024 Nitrosomonas europaea ATCC 19718 cytochrome c, class I NP_840125.1 31294 D 228410 CDS NP_840126.1 30248056 1081068 complement(31721..33127) 1 NC_004757.1 metallo-beta-lactamase superfamily protein 33127 1081068 NE0025 Nitrosomonas europaea ATCC 19718 metallo-beta-lactamase superfamily protein NP_840126.1 31721 R 228410 CDS NP_840127.1 30248057 1081069 complement(33134..34444) 1 NC_004757.1 aminotransferase class-III pyridoxal-phosphate 34444 bioA 1081069 bioA Nitrosomonas europaea ATCC 19718 aminotransferase class-III pyridoxal-phosphate NP_840127.1 33134 R 228410 CDS NP_840128.1 30248058 1081070 34605..34895 1 NC_004757.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 34895 groES 1081070 groES Nitrosomonas europaea ATCC 19718 co-chaperonin GroES NP_840128.1 34605 D 228410 CDS NP_840129.1 30248059 1081048 34935..36578 1 NC_004757.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 36578 groEL 1081048 groEL Nitrosomonas europaea ATCC 19718 chaperonin GroEL NP_840129.1 34935 D 228410 CDS NP_840130.1 30248060 1083545 36729..37457 1 NC_004757.1 short-chain dehydrogenase/reductase 37457 1083545 NE0029 Nitrosomonas europaea ATCC 19718 short-chain dehydrogenase/reductase NP_840130.1 36729 D 228410 CDS NP_840131.1 30248061 1083548 37794..39113 1 NC_004757.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 39113 tig 1083548 tig Nitrosomonas europaea ATCC 19718 trigger factor NP_840131.1 37794 D 228410 CDS NP_840132.1 30248062 1083549 39097..39741 1 NC_004757.1 hydrolyzes proteins to small peptides; with the ATPases ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 39741 clpP 1083549 clpP Nitrosomonas europaea ATCC 19718 ATP-dependent Clp protease proteolytic subunit NP_840132.1 39097 D 228410 CDS NP_840133.1 30248063 1083551 39802..41082 1 NC_004757.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 41082 clpX 1083551 clpX Nitrosomonas europaea ATCC 19718 ATP-dependent protease ATP-binding subunit ClpX NP_840133.1 39802 D 228410 CDS NP_840134.1 30248064 1083547 41193..43616 1 NC_004757.1 ATP-dependent proteinase La 43616 lon 1083547 lon Nitrosomonas europaea ATCC 19718 ATP-dependent proteinase La NP_840134.1 41193 D 228410 CDS NP_840135.1 30248065 1083553 43971..45188 1 NC_004757.1 aminotransferase class-V 45188 1083553 NE0034 Nitrosomonas europaea ATCC 19718 aminotransferase class-V NP_840135.1 43971 D 228410 CDS NP_840136.1 30248066 1083550 45481..47934 1 NC_004757.1 ATP-dependent protease LA 47934 1083550 NE0035 Nitrosomonas europaea ATCC 19718 ATP-dependent protease LA NP_840136.1 45481 D 228410 CDS NP_840137.1 30248067 1083554 complement(48009..49331) 1 NC_004757.1 Outer membrane efflux protein 49331 1083554 NE0036 Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_840137.1 48009 R 228410 CDS NP_840138.1 30248068 1083555 complement(49394..50050) 1 NC_004757.1 pcm; protein-L-isoaspartate o-methyltransferase 50050 pcm 1083555 pcm Nitrosomonas europaea ATCC 19718 pcm; protein-L-isoaspartate o-methyltransferase NP_840138.1 49394 R 228410 CDS NP_840139.1 30248069 1083552 50259..52157 1 NC_004757.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 52157 thiC 1083552 thiC Nitrosomonas europaea ATCC 19718 thiamine biosynthesis protein ThiC NP_840139.1 50259 D 228410 CDS NP_840140.1 30248070 1083557 52205..53026 1 NC_004757.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 53026 bacA 1083557 bacA Nitrosomonas europaea ATCC 19718 UDP pyrophosphate phosphatase NP_840140.1 52205 D 228410 CDS NP_840141.1 30248071 1083558 complement(53027..53479) 1 NC_004757.1 rhodanese/cdc25 fold 53479 1083558 NE0040 Nitrosomonas europaea ATCC 19718 rhodanese/cdc25 fold NP_840141.1 53027 R 228410 CDS NP_840142.1 30248072 1083559 complement(53561..54052) 1 NC_004757.1 cyclophilin type peptidyl-prolyl cis-trans isomerase 54052 ppiB 1083559 ppiB Nitrosomonas europaea ATCC 19718 cyclophilin type peptidyl-prolyl cis-trans isomerase NP_840142.1 53561 R 228410 CDS NP_840143.1 30248073 1083560 complement(54071..54712) 1 NC_004757.1 cyclophilin type peptidyl-prolyl cis-trans isomerase 54712 ppiA 1083560 ppiA Nitrosomonas europaea ATCC 19718 cyclophilin type peptidyl-prolyl cis-trans isomerase NP_840143.1 54071 R 228410 CDS NP_840144.1 30248074 1083561 54841..56238 1 NC_004757.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 56238 cysS 1083561 cysS Nitrosomonas europaea ATCC 19718 cysteinyl-tRNA synthetase NP_840144.1 54841 D 228410 CDS NP_840145.1 30248075 1083556 complement(56251..57033) 1 NC_004757.1 hypothetical protein 57033 1083556 NE0044 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840145.1 56251 R 228410 CDS NP_840146.1 30248076 1083562 complement(57039..57962) 1 NC_004757.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 57962 motB 1083562 motB Nitrosomonas europaea ATCC 19718 flagellar motor protein MotB NP_840146.1 57039 R 228410 CDS NP_840147.1 30248077 1083563 complement(58002..58862) 1 NC_004757.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 58862 motA 1083563 motA Nitrosomonas europaea ATCC 19718 flagellar motor protein MotA NP_840147.1 58002 R 228410 CDS NP_840148.1 30248078 1083566 59059..59640 1 NC_004757.1 cytidine and deoxycytidylate deaminase zinc-binding region 59640 1083566 NE0047 Nitrosomonas europaea ATCC 19718 cytidine and deoxycytidylate deaminase zinc-binding region NP_840148.1 59059 D 228410 CDS NP_840149.1 30248079 1083564 59943..60731 1 NC_004757.1 class II aldolase/adducin domain-containing protein 60731 1083564 NE0048 Nitrosomonas europaea ATCC 19718 class II aldolase/adducin domain-containing protein NP_840149.1 59943 D 228410 CDS NP_840150.1 30248080 1083567 60731..64420 1 NC_004757.1 sensory transduction histidine kinase 64420 1083567 NE0049 Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_840150.1 60731 D 228410 CDS NP_840151.1 30248081 1083565 64417..65610 1 NC_004757.1 ATP-citrate lyase/succinyl-CoA ligase:ATP-grasp domain 65610 sucC 1083565 sucC Nitrosomonas europaea ATCC 19718 ATP-citrate lyase/succinyl-CoA ligase:ATP-grasp domain NP_840151.1 64417 D 228410 CDS NP_840152.1 30248082 1083568 65613..66488 1 NC_004757.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 66488 sucD 1083568 sucD Nitrosomonas europaea ATCC 19718 succinyl-CoA synthetase subunit alpha NP_840152.1 65613 D 228410 CDS NP_840153.1 30248083 1083569 66507..66854 1 NC_004757.1 hypothetical protein 66854 1083569 NE0052 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840153.1 66507 D 228410 CDS NP_840154.1 30248084 1083570 66873..68300 1 NC_004757.1 D-alanyl-D-alanine carboxypeptidase 68300 1083570 NE0053 Nitrosomonas europaea ATCC 19718 D-alanyl-D-alanine carboxypeptidase NP_840154.1 66873 D 228410 CDS NP_840155.1 30248085 1083578 74631..76334 1 NC_004757.1 ABC transporter 76334 1083578 NE0054 Nitrosomonas europaea ATCC 19718 ABC transporter NP_840155.1 74631 D 228410 CDS NP_840156.1 30248086 1083580 76453..76998 1 NC_004757.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 76998 ispZ 1083580 ispZ Nitrosomonas europaea ATCC 19718 intracellular septation protein A NP_840156.1 76453 D 228410 CDS NP_840157.1 30248087 1083579 77027..78160 1 NC_004757.1 HhH-GPD 78160 mutY 1083579 mutY Nitrosomonas europaea ATCC 19718 HhH-GPD NP_840157.1 77027 D 228410 CDS NP_840158.1 30248088 1083576 78153..78779 1 NC_004757.1 5-formyltetrahydrofolate cyclo-ligase 78779 1083576 NE0057 Nitrosomonas europaea ATCC 19718 5-formyltetrahydrofolate cyclo-ligase NP_840158.1 78153 D 228410 CDS NP_840159.1 30248089 1083581 complement(78837..79472) 1 NC_004757.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; aromatic acid decarboxylase 79472 1083581 NE0058 Nitrosomonas europaea ATCC 19718 aromatic acid decarboxylase NP_840159.1 78837 R 228410 CDS NP_840160.1 30248090 1083583 complement(79491..80462) 1 NC_004757.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 80462 1083583 NE0059 Nitrosomonas europaea ATCC 19718 HPr kinase/phosphorylase NP_840160.1 79491 R 228410 CDS NP_840161.1 30248091 1083584 complement(80449..80919) 1 NC_004757.1 phosphotransferase system mannitol/fructose-specific IIA domain-containing protein 80919 ptsN 1083584 ptsN Nitrosomonas europaea ATCC 19718 phosphotransferase system mannitol/fructose-specific IIA domain-containing protein NP_840161.1 80449 R 228410 CDS NP_840162.1 30248092 1083582 complement(81151..81486) 1 NC_004757.1 sigma-54 modulation protein / S30EA ribosomal protein 81486 1083582 NE0061 Nitrosomonas europaea ATCC 19718 sigma-54 modulation protein / S30EA ribosomal protein NP_840162.1 81151 R 228410 CDS NP_840163.1 30248093 1083585 complement(81662..83125) 1 NC_004757.1 RNA polymerase sigma-54 factor family protein 83125 rpoN1 1083585 rpoN1 Nitrosomonas europaea ATCC 19718 RNA polymerase sigma-54 factor family protein NP_840163.1 81662 R 228410 CDS NP_840164.1 30248094 1083588 complement(83132..83854) 1 NC_004757.1 ABC transporter ATPase 83854 1083588 NE0063 Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_840164.1 83132 R 228410 CDS NP_840165.1 30248095 1083586 complement(83889..84506) 1 NC_004757.1 signal peptide protein 84506 1083586 NE0064 Nitrosomonas europaea ATCC 19718 signal peptide protein NP_840165.1 83889 R 228410 CDS NP_840166.1 30248096 1083589 complement(84563..85144) 1 NC_004757.1 hypothetical protein 85144 1083589 NE0065 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840166.1 84563 R 228410 CDS NP_840167.1 30248097 1083587 85429..86529 1 NC_004757.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 86529 nadA 1083587 nadA Nitrosomonas europaea ATCC 19718 quinolinate synthetase NP_840167.1 85429 D 228410 CDS NP_840168.1 30248098 1083591 86529..87353 1 NC_004757.1 hypothetical protein 87353 1083591 NE0067 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840168.1 86529 D 228410 CDS NP_840169.1 30248099 1083592 87350..88507 1 NC_004757.1 phospholipase D/transphosphatidylase 88507 1083592 NE0068 Nitrosomonas europaea ATCC 19718 phospholipase D/transphosphatidylase NP_840169.1 87350 D 228410 CDS NP_840170.1 30248100 1083594 88660..90042 1 NC_004757.1 poly A polymerase family protein 90042 pcnB 1083594 pcnB Nitrosomonas europaea ATCC 19718 poly A polymerase family protein NP_840170.1 88660 D 228410 CDS NP_840171.1 30248101 1083590 90039..90551 1 NC_004757.1 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 90551 1083590 NE0070 Nitrosomonas europaea ATCC 19718 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase NP_840171.1 90039 D 228410 CDS NP_840172.1 30248102 1083595 90548..91192 1 NC_004757.1 deoxynucleoside kinase 91192 1083595 NE0071 Nitrosomonas europaea ATCC 19718 deoxynucleoside kinase NP_840172.1 90548 D 228410 CDS NP_840173.1 30248103 1083593 91193..92002 1 NC_004757.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 92002 panB 1083593 panB Nitrosomonas europaea ATCC 19718 3-methyl-2-oxobutanoate hydroxymethyltransferase NP_840173.1 91193 D 228410 CDS NP_840174.1 30248104 1083596 92026..92859 1 NC_004757.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 92859 panC 1083596 panC Nitrosomonas europaea ATCC 19718 pantoate--beta-alanine ligase NP_840174.1 92026 D 228410 CDS NP_840175.1 30248105 1083597 complement(92896..95451) 1 NC_004757.1 alpha-glucan phosphorylase 95451 1083597 NE0074 Nitrosomonas europaea ATCC 19718 alpha-glucan phosphorylase NP_840175.1 92896 R 228410 CDS NP_840176.1 30248106 1083598 complement(95489..96034) 1 NC_004757.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 96034 1083598 NE0075 Nitrosomonas europaea ATCC 19718 oligoribonuclease NP_840176.1 95489 R 228410 CDS NP_840177.1 30248107 1083599 96161..97465 1 NC_004757.1 M48 family peptidase 97465 1083599 NE0076 Nitrosomonas europaea ATCC 19718 M48 family peptidase NP_840177.1 96161 D 228410 CDS NP_840178.1 30248108 1083601 97462..97803 1 NC_004757.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 97803 phhB 1083601 phhB Nitrosomonas europaea ATCC 19718 pterin-4-alpha-carbinolamine dehydratase NP_840178.1 97462 D 228410 CDS NP_840179.1 30248109 1083602 97800..98744 1 NC_004757.1 ATP-binding protein 98744 1083602 NE0078 Nitrosomonas europaea ATCC 19718 ATP-binding protein NP_840179.1 97800 D 228410 CDS NP_840180.1 30248110 1083603 complement(98819..99280) 1 NC_004757.1 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) 99280 fkpA 1083603 fkpA Nitrosomonas europaea ATCC 19718 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) NP_840180.1 98819 R 228410 CDS NP_840181.1 30248111 1083604 complement(99423..101147) 1 NC_004757.1 diguanylate cyclase/phosphodiesterase 101147 1083604 NE0080 Nitrosomonas europaea ATCC 19718 diguanylate cyclase/phosphodiesterase NP_840181.1 99423 R 228410 CDS NP_840182.1 30248112 1083600 complement(101247..101969) 1 NC_004757.1 transmembrane protein 101969 1083600 NE0081 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_840182.1 101247 R 228410 CDS NP_840183.1 30248113 1083605 102223..102756 1 NC_004757.1 hypothetical protein 102756 1083605 NE0082 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840183.1 102223 D 228410 CDS NP_840184.1 30248114 1083607 102770..103315 1 NC_004757.1 hypothetical protein 103315 1083607 NE0083 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840184.1 102770 D 228410 CDS NP_840185.1 30248115 1083606 103482..103718 1 NC_004757.1 thioredoxin 103718 1083606 NE0084 Nitrosomonas europaea ATCC 19718 thioredoxin NP_840185.1 103482 D 228410 CDS NP_840186.1 30248116 1083608 complement(103819..105078) 1 NC_004757.1 SAM-binding motif-containing protein 105078 1083608 NE0085 Nitrosomonas europaea ATCC 19718 SAM-binding motif-containing protein NP_840186.1 103819 R 228410 CDS NP_840187.1 30248117 1083610 complement(105092..105817) 1 NC_004757.1 hypothetical protein 105817 1083610 NE0086 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840187.1 105092 R 228410 CDS NP_840188.1 30248118 1083611 complement(105814..106446) 1 NC_004757.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 106446 purN 1083611 purN Nitrosomonas europaea ATCC 19718 phosphoribosylglycinamide formyltransferase NP_840188.1 105814 R 228410 CDS NP_840189.1 30248119 1083609 complement(106458..107516) 1 NC_004757.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 107516 purM 1083609 purM Nitrosomonas europaea ATCC 19718 phosphoribosylaminoimidazole synthetase NP_840189.1 106458 R 228410 CDS NP_840190.1 30248120 1083613 107576..108634 1 NC_004757.1 hypothetical protein 108634 1083613 NE0089 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840190.1 107576 D 228410 CDS NP_840191.1 30248121 1083612 complement(108767..112162) 1 NC_004757.1 guanylate cyclase 112162 1083612 NE0090 Nitrosomonas europaea ATCC 19718 guanylate cyclase NP_840191.1 108767 R 228410 CDS NP_840192.1 30248122 1083617 complement(112455..114539) 1 NC_004757.1 universal stress protein 114539 1083617 NE0091 Nitrosomonas europaea ATCC 19718 universal stress protein NP_840192.1 112455 R 228410 CDS NP_840193.1 30248123 1083616 complement(114744..115454) 1 NC_004757.1 hypothetical protein 115454 1083616 NE0092 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840193.1 114744 R 228410 CDS NP_840194.1 30248124 1083618 complement(115940..120313) 1 NC_004757.1 recQ; ATP-dependent DNA helicase 120313 1083618 NE0093 Nitrosomonas europaea ATCC 19718 recQ; ATP-dependent DNA helicase NP_840194.1 115940 R 228410 CDS NP_840195.1 30248125 1083614 complement(121762..123321) 1 NC_004757.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 123321 guaA 1083614 guaA Nitrosomonas europaea ATCC 19718 GMP synthase NP_840195.1 121762 R 228410 CDS NP_840196.1 30248126 1083620 complement(123333..124796) 1 NC_004757.1 guaB; inosine-5'-monophosphate dehydrogenase oxidoreductase protein 124796 guaB 1083620 guaB Nitrosomonas europaea ATCC 19718 guaB; inosine-5'-monophosphate dehydrogenase oxidoreductase protein NP_840196.1 123333 R 228410 CDS NP_840197.1 30248127 1083621 complement(124910..125272) 1 NC_004757.1 hypothetical protein 125272 1083621 NE0096 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840197.1 124910 R 228410 CDS NP_840198.1 30248128 1083619 complement(125318..125983) 1 NC_004757.1 HAD family hydrolase 125983 1083619 NE0097 Nitrosomonas europaea ATCC 19718 HAD family hydrolase NP_840198.1 125318 R 228410 CDS NP_840199.1 30248129 1083615 complement(126117..126779) 1 NC_004757.1 DnaA regulatory inactivator Hda 126779 1083615 NE0098 Nitrosomonas europaea ATCC 19718 DnaA regulatory inactivator Hda NP_840199.1 126117 R 228410 CDS NP_840200.1 30248130 1081002 complement(126918..128096) 1 NC_004757.1 hypothetical protein 128096 1081002 NE0099 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840200.1 126918 R 228410 CDS NP_840201.1 30248131 1081003 complement(128125..129399) 1 NC_004757.1 general substrate transporters 129399 1081003 NE0100 Nitrosomonas europaea ATCC 19718 general substrate transporters NP_840201.1 128125 R 228410 CDS NP_840202.1 30248132 1081004 complement(129566..130534) 1 NC_004757.1 Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; glycerate dehydrogenase 130534 hprA 1081004 hprA Nitrosomonas europaea ATCC 19718 glycerate dehydrogenase NP_840202.1 129566 R 228410 CDS NP_840203.1 30248133 1081006 complement(130750..131064) 1 NC_004757.1 Timkovich,R.,et al. Biophys. J. 75 (4), 1964-1972 (1998)show the protein precursor begins with the 2nd Met. The mature protein begins at residue 23 (DADL...).; cytochrome c-552 131064 cyt_c552 1081006 cyt_c552 Nitrosomonas europaea ATCC 19718 cytochrome c-552 NP_840203.1 130750 R 228410 CDS NP_840204.1 30248134 1081007 complement(131085..133154) 1 NC_004757.1 hypothetical protein 133154 yyaL 1081007 yyaL Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840204.1 131085 R 228410 CDS NP_840205.1 30248135 1081008 complement(133176..134849) 1 NC_004757.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 134849 1081008 NE0104 Nitrosomonas europaea ATCC 19718 dihydroxy-acid dehydratase NP_840205.1 133176 R 228410 CDS NP_840206.1 30248136 1081009 134976..135812 1 NC_004757.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 135812 lgt 1081009 lgt Nitrosomonas europaea ATCC 19718 prolipoprotein diacylglyceryl transferase NP_840206.1 134976 D 228410 CDS NP_840207.1 30248137 1081010 135832..136992 1 NC_004757.1 Domain of unknown function DUF140; ABC transporter permease 136992 1081010 NE0106 Nitrosomonas europaea ATCC 19718 ABC transporter permease NP_840207.1 135832 D 228410 CDS NP_840208.1 30248138 1081011 136992..137771 1 NC_004757.1 ABC transporter ATPase 137771 1081011 NE0107 Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_840208.1 136992 D 228410 CDS NP_840209.1 30248139 1081012 137822..138952 1 NC_004757.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 138952 dapE 1081012 dapE Nitrosomonas europaea ATCC 19718 succinyl-diaminopimelate desuccinylase NP_840209.1 137822 D 228410 CDS NP_840210.1 30248140 1081015 complement(138991..139434) 1 NC_004757.1 hypothetical protein 139434 1081015 NE0109 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840210.1 138991 R 228410 CDS NP_840211.1 30248141 1081016 complement(140382..140699) 1 NC_004757.1 hypothetical protein 140699 1081016 NE0110 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840211.1 140382 R 228410 CDS NP_840212.1 30248142 1081017 complement(140733..141716) 1 NC_004757.1 hypothetical protein 141716 1081017 NE0111 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840212.1 140733 R 228410 CDS NP_840213.1 30248143 1081018 complement(141738..142079) 1 NC_004757.1 hypothetical protein 142079 1081018 NE0112 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840213.1 141738 R 228410 CDS NP_840214.1 30248144 1081019 complement(142114..143238) 1 NC_004757.1 hypothetical protein 143238 1081019 NE0113 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840214.1 142114 R 228410 CDS NP_840215.1 30248145 1081020 complement(143213..143479) 1 NC_004757.1 hypothetical protein 143479 1081020 NE0114 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840215.1 143213 R 228410 CDS NP_840216.1 30248146 1081021 complement(143736..144902) 1 NC_004757.1 hypothetical protein 144902 1081021 NE0115 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840216.1 143736 R 228410 CDS NP_840217.1 30248147 1081022 complement(144899..145195) 1 NC_004757.1 hypothetical protein 145195 1081022 NE0116 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840217.1 144899 R 228410 CDS NP_840218.1 30248148 1081023 complement(145192..146148) 1 NC_004757.1 hypothetical protein 146148 1081023 NE0117 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840218.1 145192 R 228410 CDS NP_840219.1 30248149 1081024 complement(146126..146389) 1 NC_004757.1 hypothetical protein 146389 1081024 NE0118 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840219.1 146126 R 228410 CDS NP_840220.1 30248150 1081025 complement(146417..148159) 1 NC_004757.1 hypothetical protein 148159 1081025 NE0119 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840220.1 146417 R 228410 CDS NP_840221.1 30248151 1081026 complement(148159..149109) 1 NC_004757.1 hypothetical protein 149109 1081026 NE0120 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840221.1 148159 R 228410 CDS NP_840222.1 30248152 1081027 complement(149114..149830) 1 NC_004757.1 hypothetical protein 149830 1081027 NE0121 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840222.1 149114 R 228410 CDS NP_840223.1 30248153 1081028 complement(149894..150280) 1 NC_004757.1 hypothetical protein 150280 1081028 NE0122 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840223.1 149894 R 228410 CDS NP_840224.1 30248154 1081029 complement(150363..152915) 1 NC_004757.1 hypothetical protein 152915 1081029 NE0123 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840224.1 150363 R 228410 CDS NP_840225.1 30248155 1081033 complement(155926..156975) 1 NC_004757.1 transmembrane sensor 156975 1081033 NE0127 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_840225.1 155926 R 228410 CDS NP_840226.1 30248156 1081034 complement(156976..157509) 1 NC_004757.1 ECF subfamily RNA polymerase sigma-70 factor 157509 1081034 NE0128 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma-70 factor NP_840226.1 156976 R 228410 CDS NP_840227.1 30248157 1081035 complement(158035..158355) 1 NC_004757.1 lipoprotein 158355 1081035 NE0129 Nitrosomonas europaea ATCC 19718 lipoprotein NP_840227.1 158035 R 228410 CDS NP_840228.1 30248158 1081036 complement(158470..158742) 1 NC_004757.1 hypothetical protein 158742 1081036 NE0130 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840228.1 158470 R 228410 CDS NP_840229.1 30248159 1081037 complement(158894..159049) 1 NC_004757.1 hypothetical protein 159049 1081037 NE0131 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840229.1 158894 R 228410 CDS NP_840230.1 30248160 1081038 complement(159065..159421) 1 NC_004757.1 osmotically inducible protein Y 159421 osmY 1081038 osmY Nitrosomonas europaea ATCC 19718 osmotically inducible protein Y NP_840230.1 159065 R 228410 CDS NP_840231.1 30248161 1081040 complement(160713..161684) 1 NC_004757.1 transposase 161684 1081040 NE0134 Nitrosomonas europaea ATCC 19718 transposase NP_840231.1 160713 R 228410 CDS NP_840232.1 30248162 1081042 complement(162614..162961) 1 NC_004757.1 hypothetical protein 162961 1081042 NE0136 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840232.1 162614 R 228410 CDS NP_840233.1 30248163 1081043 163156..163812 1 NC_004757.1 hypothetical protein 163812 1081043 NE0137 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840233.1 163156 D 228410 CDS NP_840234.1 30248164 1081044 complement(163839..164627) 1 NC_004757.1 metallo-beta-lactamase superfamily protein 164627 1081044 NE0138 Nitrosomonas europaea ATCC 19718 metallo-beta-lactamase superfamily protein NP_840234.1 163839 R 228410 CDS NP_840235.1 30248165 1081045 164687..165523 1 NC_004757.1 Generic methyl-transferase 165523 1081045 NE0139 Nitrosomonas europaea ATCC 19718 Generic methyl-transferase NP_840235.1 164687 D 228410 CDS NP_840236.1 30248166 1081046 165523..166008 1 NC_004757.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 166008 rnhA 1081046 rnhA Nitrosomonas europaea ATCC 19718 ribonuclease H NP_840236.1 165523 D 228410 CDS NP_840237.1 30248167 1081047 166020..166718 1 NC_004757.1 DNA polymerase III subunit epsilon 166718 dnaQ 1081047 dnaQ Nitrosomonas europaea ATCC 19718 DNA polymerase III subunit epsilon NP_840237.1 166020 D 228410 CDS NP_840238.1 30248168 1081049 complement(166868..168253) 1 NC_004757.1 aminotransferase protein 168253 1081049 NE0142 Nitrosomonas europaea ATCC 19718 aminotransferase protein NP_840238.1 166868 R 228410 CDS NP_840239.1 30248169 1081050 168686..169096 1 NC_004757.1 Chain A, Red Copper Protein Nitrosocyanin From Nitrosomonas Europaea pdb|1IBY|B Chain B, Red Copper Protein Nitrosocyanin From Nitrosomonas Europaea pdb|1IBY|C Chain C, Red Copper Protein Nitrosocyanin From Nitrosomonas; red copper protein nitrosocyanin subunit A 169096 1081050 NE0143 Nitrosomonas europaea ATCC 19718 red copper protein nitrosocyanin subunit A NP_840239.1 168686 D 228410 CDS NP_840240.1 30248170 1081051 169380..169805 1 NC_004757.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 169805 ndk 1081051 ndk Nitrosomonas europaea ATCC 19718 nucleoside diphosphate kinase NP_840240.1 169380 D 228410 CDS NP_840241.1 30248171 1081052 169899..170984 1 NC_004757.1 hypothetical protein 170984 1081052 NE0145 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840241.1 169899 D 228410 CDS NP_840242.1 30248172 1081053 171028..171819 1 NC_004757.1 hypothetical protein 171819 pilF 1081053 pilF Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840242.1 171028 D 228410 CDS NP_840243.1 30248173 1081054 171809..172873 1 NC_004757.1 hypothetical protein 172873 1081054 NE0147 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840243.1 171809 D 228410 CDS NP_840244.1 30248174 1081055 172908..173564 1 NC_004757.1 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 173564 1081055 NE0148 Nitrosomonas europaea ATCC 19718 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase NP_840244.1 172908 D 228410 CDS NP_840245.1 30248175 1081058 173528..174160 1 NC_004757.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 174160 1081058 NE0149 Nitrosomonas europaea ATCC 19718 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase NP_840245.1 173528 D 228410 CDS NP_840246.2 161511228 1081060 174153..175415 1 NC_004757.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 175415 hisS 1081060 hisS Nitrosomonas europaea ATCC 19718 histidyl-tRNA synthetase NP_840246.2 174153 D 228410 CDS NP_840247.1 30248177 1081063 175437..176081 1 NC_004757.1 hypothetical protein 176081 1081063 NE0151 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840247.1 175437 D 228410 CDS NP_840248.1 30248178 1081065 176078..177310 1 NC_004757.1 PQQ repeat-containing protein 177310 1081065 NE0152 Nitrosomonas europaea ATCC 19718 PQQ repeat-containing protein NP_840248.1 176078 D 228410 CDS NP_840249.1 30248179 1081073 177362..178765 1 NC_004757.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 178765 engA 1081073 engA Nitrosomonas europaea ATCC 19718 GTP-binding protein EngA NP_840249.1 177362 D 228410 CDS NP_840250.1 30248180 1081075 178919..179221 1 NC_004757.1 transposase IS911 179221 tISRso8a 1081075 tISRso8a Nitrosomonas europaea ATCC 19718 transposase IS911 NP_840250.1 178919 D 228410 CDS NP_840251.1 30248181 1081076 179188..180093 1 NC_004757.1 integrase catalytic subunit 180093 1081076 NE0155 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840251.1 179188 D 228410 CDS NP_840252.1 30248182 1081077 180654..181820 1 NC_004757.1 hemolysin D 181820 mexE 1081077 mexE Nitrosomonas europaea ATCC 19718 hemolysin D NP_840252.1 180654 D 228410 CDS NP_840253.1 30248183 1081079 181846..184992 1 NC_004757.1 transmembrane multidrug-efflux system lipoprotein transmembrane 184992 1081079 NE0157 Nitrosomonas europaea ATCC 19718 transmembrane multidrug-efflux system lipoprotein transmembrane NP_840253.1 181846 D 228410 CDS NP_840254.1 30248184 1081080 complement(185073..186245) 1 NC_004757.1 hemolysin-type secretion transmembrane protein 186245 1081080 NE0158 Nitrosomonas europaea ATCC 19718 hemolysin-type secretion transmembrane protein NP_840254.1 185073 R 228410 CDS NP_840255.1 30248185 1081081 complement(186242..188452) 1 NC_004757.1 ABC transporter ATP-binding protein/permease 188452 1081081 NE0159 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein/permease NP_840255.1 186242 R 228410 CDS NP_840256.1 30248186 1081082 complement(188445..189821) 1 NC_004757.1 Outer membrane efflux protein 189821 1081082 NE0160 Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_840256.1 188445 R 228410 CDS NP_840257.1 30248187 1081084 complement(189847..199041) 1 NC_004757.1 hemolysin-type calcium-binding domain-containing protein 199041 1081084 NE0161 Nitrosomonas europaea ATCC 19718 hemolysin-type calcium-binding domain-containing protein NP_840257.1 189847 R 228410 CDS NP_840258.1 30248188 1081089 complement(199541..200584) 1 NC_004757.1 integrase catalytic subunit 200584 1081089 NE0162 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840258.1 199541 R 228410 CDS NP_840259.1 30248189 1081092 201864..202298 1 NC_004757.1 hypothetical protein 202298 1081092 NE0165 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840259.1 201864 D 228410 CDS NP_840260.1 30248190 1081093 202559..202885 1 NC_004757.1 hypothetical protein 202885 1081093 NE0166 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840260.1 202559 D 228410 CDS NP_840261.1 30248191 1081094 complement(202941..203228) 1 NC_004757.1 hypothetical protein 203228 1081094 NE0167 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840261.1 202941 R 228410 CDS NP_840262.1 30248192 1081095 complement(203218..206412) 1 NC_004757.1 multidrug resistance protein MexB 206412 1081095 NE0168 Nitrosomonas europaea ATCC 19718 multidrug resistance protein MexB NP_840262.1 203218 R 228410 CDS NP_840263.1 30248193 1081096 complement(206448..207647) 1 NC_004757.1 hemolysin D 207647 acrA 1081096 acrA Nitrosomonas europaea ATCC 19718 hemolysin D NP_840263.1 206448 R 228410 CDS NP_840264.1 30248194 1081097 complement(207747..209297) 1 NC_004757.1 Outer membrane efflux protein 209297 oprM 1081097 oprM Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_840264.1 207747 R 228410 CDS NP_840265.1 30248195 1081098 complement(209584..210651) 1 NC_004757.1 hypothetical protein 210651 1081098 NE0171 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840265.1 209584 R 228410 CDS NP_840266.1 30248196 1081099 complement(210838..212964) 1 NC_004757.1 polynucleotide phosphorylase/polyadenylase 212964 pnp 1081099 pnp Nitrosomonas europaea ATCC 19718 polynucleotide phosphorylase/polyadenylase NP_840266.1 210838 R 228410 CDS NP_840267.1 30248197 1081100 complement(213159..213428) 1 NC_004757.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 213428 rpsO 1081100 rpsO Nitrosomonas europaea ATCC 19718 30S ribosomal protein S15 NP_840267.1 213159 R 228410 CDS NP_840268.1 30248198 1081101 213761..214957 1 NC_004757.1 aminotransferase class-V 214957 1081101 NE0174 Nitrosomonas europaea ATCC 19718 aminotransferase class-V NP_840268.1 213761 D 228410 CDS NP_840269.1 30248199 1081102 214993..215808 1 NC_004757.1 ADP-glucose pyrophosphorylase 215808 1081102 NE0175 Nitrosomonas europaea ATCC 19718 ADP-glucose pyrophosphorylase NP_840269.1 214993 D 228410 CDS NP_840270.1 30248200 1081103 215824..216273 1 NC_004757.1 hypothetical protein 216273 1081103 NE0176 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840270.1 215824 D 228410 CDS NP_840271.1 30248201 1081104 216287..217348 1 NC_004757.1 Fatty acid desaturase, type 2 217348 1081104 NE0177 Nitrosomonas europaea ATCC 19718 Fatty acid desaturase, type 2 NP_840271.1 216287 D 228410 CDS NP_840272.1 30248202 1081105 217395..218099 1 NC_004757.1 phosphoglycerate mutase family protein 218099 gpmA 1081105 gpmA Nitrosomonas europaea ATCC 19718 phosphoglycerate mutase family protein NP_840272.1 217395 D 228410 CDS NP_840273.1 30248203 1081106 complement(218149..218835) 1 NC_004757.1 hypothetical protein 218835 1081106 NE0179 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840273.1 218149 R 228410 CDS NP_840274.1 30248204 1081107 complement(218882..220195) 1 NC_004757.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 220195 serS 1081107 serS Nitrosomonas europaea ATCC 19718 seryl-tRNA synthetase NP_840274.1 218882 R 228410 CDS NP_840275.1 30248205 1081108 complement(220411..220935) 1 NC_004757.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 220935 apt 1081108 apt Nitrosomonas europaea ATCC 19718 adenine phosphoribosyltransferase NP_840275.1 220411 R 228410 CDS NP_840276.1 30248206 1081109 complement(221025..221456) 1 NC_004757.1 hypothetical protein 221456 1081109 NE0182 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840276.1 221025 R 228410 CDS NP_840277.1 30248207 1081110 complement(221653..222264) 1 NC_004757.1 hypothetical protein 222264 1081110 NE0183 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840277.1 221653 R 228410 CDS NP_840278.1 30248208 1081111 complement(222534..222983) 1 NC_004757.1 NUDIX hydrolase 222983 1081111 NE0184 Nitrosomonas europaea ATCC 19718 NUDIX hydrolase NP_840278.1 222534 R 228410 CDS NP_840279.1 30248209 1081112 223820..224545 1 NC_004757.1 glycosyl transferase family protein 224545 1081112 NE0185 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_840279.1 223820 D 228410 CDS NP_840280.1 30248210 1081113 complement(224625..224909) 1 NC_004757.1 hypothetical protein 224909 1081113 NE0186 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840280.1 224625 R 228410 CDS NP_840281.1 30248211 1081114 225360..226346 1 NC_004757.1 hypothetical protein 226346 1081114 NE0187 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840281.1 225360 D 228410 CDS NP_840282.1 30248212 1081115 226510..227553 1 NC_004757.1 integrase catalytic subunit 227553 1081115 NE0188 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840282.1 226510 D 228410 CDS NP_840283.1 30248213 1081116 complement(227840..228148) 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 228148 1081116 NE0189 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_840283.1 227840 R 228410 CDS NP_840284.1 30248214 1081117 complement(228266..228985) 1 NC_004757.1 ADP-glucose pyrophosphorylase 228985 1081117 NE0190 Nitrosomonas europaea ATCC 19718 ADP-glucose pyrophosphorylase NP_840284.1 228266 R 228410 CDS NP_840285.1 30248215 1081118 complement(229013..230011) 1 NC_004757.1 hypothetical protein 230011 1081118 NE0191 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840285.1 229013 R 228410 CDS NP_840286.1 30248216 1081119 230167..230463 1 NC_004757.1 hypothetical protein 230463 1081119 NE0192 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840286.1 230167 D 228410 CDS NP_840287.1 30248217 1081120 230541..232043 1 NC_004757.1 Mg(2+) chelatase family protein 232043 1081120 NE0193 Nitrosomonas europaea ATCC 19718 Mg(2+) chelatase family protein NP_840287.1 230541 D 228410 CDS NP_840288.1 30248218 1081121 complement(232072..233469) 1 NC_004757.1 dnaB; replicative DNA helicase protein 233469 dnaB 1081121 dnaB Nitrosomonas europaea ATCC 19718 dnaB; replicative DNA helicase protein NP_840288.1 232072 R 228410 CDS NP_840289.1 30248219 1081122 complement(233577..234032) 1 NC_004757.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 234032 rplI 1081122 rplI Nitrosomonas europaea ATCC 19718 50S ribosomal protein L9 NP_840289.1 233577 R 228410 CDS NP_840290.1 30248220 1081123 complement(234051..234329) 1 NC_004757.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 234329 rpsR 1081123 rpsR Nitrosomonas europaea ATCC 19718 30S ribosomal protein S18 NP_840290.1 234051 R 228410 CDS NP_840291.1 30248221 1081124 complement(234366..234692) 1 NC_004757.1 weak blast hit to gi|16123684|ref|NP_406997.1| (NC_003143) primosomal replication protein n [Yersinia pestis] Score = 47.0 bits (110), Expect = 3e-05 Identities = 30/102 (29%); hypothetical protein 234692 1081124 NE0197 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840291.1 234366 R 228410 CDS NP_840292.1 30248222 1081125 complement(234676..235116) 1 NC_004757.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 235116 rpsF 1081125 rpsF Nitrosomonas europaea ATCC 19718 30S ribosomal protein S6 NP_840292.1 234676 R 228410 CDS NP_840293.1 30248223 1081126 235507..235884 1 NC_004757.1 hypothetical protein 235884 1081126 NE0199 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840293.1 235507 D 228410 CDS NP_840294.1 30248224 1081127 235919..236728 1 NC_004757.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 236728 atpB 1081127 atpB Nitrosomonas europaea ATCC 19718 F0F1 ATP synthase subunit A NP_840294.1 235919 D 228410 CDS NP_840295.1 30248225 1081128 236771..237043 1 NC_004757.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 237043 atpE 1081128 atpE Nitrosomonas europaea ATCC 19718 F0F1 ATP synthase subunit C NP_840295.1 236771 D 228410 CDS NP_840296.1 30248226 1081129 237090..237563 1 NC_004757.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 237563 atpF 1081129 atpF Nitrosomonas europaea ATCC 19718 F0F1 ATP synthase subunit B NP_840296.1 237090 D 228410 CDS NP_840297.1 30248227 1081130 237564..238100 1 NC_004757.1 ATP synthase subunit delta (OSCP) 238100 atpH 1081130 atpH Nitrosomonas europaea ATCC 19718 ATP synthase subunit delta (OSCP) NP_840297.1 237564 D 228410 CDS NP_840298.1 30248228 1081131 238113..239654 1 NC_004757.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 239654 atpA 1081131 atpA Nitrosomonas europaea ATCC 19718 F0F1 ATP synthase subunit alpha NP_840298.1 238113 D 228410 CDS NP_840299.1 30248229 1081132 239658..240542 1 NC_004757.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 240542 atpG 1081132 atpG Nitrosomonas europaea ATCC 19718 F0F1 ATP synthase subunit gamma NP_840299.1 239658 D 228410 CDS NP_840300.1 30248230 1081133 240573..241955 1 NC_004757.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 241955 atpD 1081133 atpD Nitrosomonas europaea ATCC 19718 F0F1 ATP synthase subunit beta NP_840300.1 240573 D 228410 CDS NP_840301.1 30248231 1081134 241984..242406 1 NC_004757.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 242406 atpC 1081134 atpC Nitrosomonas europaea ATCC 19718 F0F1 ATP synthase subunit epsilon NP_840301.1 241984 D 228410 CDS NP_840302.1 30248232 1081135 242652..244028 1 NC_004757.1 glmU; UDP-N-acetylglucosamine pyrophosphorylase protein 244028 glmU 1081135 glmU Nitrosomonas europaea ATCC 19718 glmU; UDP-N-acetylglucosamine pyrophosphorylase protein NP_840302.1 242652 D 228410 CDS NP_840303.1 30248233 1081136 244066..245913 1 NC_004757.1 glutamine amidotransferase 245913 glmS 1081136 glmS Nitrosomonas europaea ATCC 19718 glutamine amidotransferase NP_840303.1 244066 D 228410 CDS NP_840304.1 30248234 1081137 246049..246774 1 NC_004757.1 hypothetical protein 246774 1081137 NE0210 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840304.1 246049 D 228410 CDS NP_840305.1 30248235 1081138 246771..247316 1 NC_004757.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 247316 ruvC 1081138 ruvC Nitrosomonas europaea ATCC 19718 Holliday junction resolvase NP_840305.1 246771 D 228410 CDS NP_840306.1 30248236 1081139 247313..247900 1 NC_004757.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 247900 ruvA 1081139 ruvA Nitrosomonas europaea ATCC 19718 Holliday junction DNA helicase RuvA NP_840306.1 247313 D 228410 CDS NP_840307.1 30248237 1081140 247919..248959 1 NC_004757.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 248959 ruvB 1081140 ruvB Nitrosomonas europaea ATCC 19718 Holliday junction DNA helicase RuvB NP_840307.1 247919 D 228410 CDS NP_840308.1 30248238 1081141 249019..249429 1 NC_004757.1 4-hydroxybenzoyl-CoA thioesterase 249429 1081141 NE0214 Nitrosomonas europaea ATCC 19718 4-hydroxybenzoyl-CoA thioesterase NP_840308.1 249019 D 228410 CDS NP_840309.1 30248239 1081142 249426..250130 1 NC_004757.1 MotA/TolQ/ExbB proton channel family protein 250130 tolQ 1081142 tolQ Nitrosomonas europaea ATCC 19718 MotA/TolQ/ExbB proton channel family protein NP_840309.1 249426 D 228410 CDS NP_840310.1 30248240 1081143 250127..250543 1 NC_004757.1 biopolymer transport protein ExbD/TolR 250543 tolR 1081143 tolR Nitrosomonas europaea ATCC 19718 biopolymer transport protein ExbD/TolR NP_840310.1 250127 D 228410 CDS NP_840311.1 30248241 1081144 250565..251425 1 NC_004757.1 hypothetical protein 251425 tolA 1081144 tolA Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840311.1 250565 D 228410 CDS NP_840312.1 30248242 1081145 251463..252740 1 NC_004757.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 252740 tolB 1081145 tolB Nitrosomonas europaea ATCC 19718 translocation protein TolB NP_840312.1 251463 D 228410 CDS NP_840313.1 30248243 1081146 252794..253309 1 NC_004757.1 outer membrane protein 253309 pal 1081146 pal Nitrosomonas europaea ATCC 19718 outer membrane protein NP_840313.1 252794 D 228410 CDS NP_840314.1 30248244 1081147 253309..254136 1 NC_004757.1 hypothetical protein 254136 1081147 NE0220 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840314.1 253309 D 228410 CDS NP_840315.1 30248245 1081148 254239..254874 1 NC_004757.1 radical activating enzyme 254874 1081148 NE0221 Nitrosomonas europaea ATCC 19718 radical activating enzyme NP_840315.1 254239 D 228410 CDS NP_840316.1 30248246 1081149 254896..255582 1 NC_004757.1 ExsB protein 255582 1081149 NE0222 Nitrosomonas europaea ATCC 19718 ExsB protein NP_840316.1 254896 D 228410 CDS NP_840317.1 30248247 1081150 complement(255613..255966) 1 NC_004757.1 dihydroneopterin aldolase 255966 1081150 NE0223 Nitrosomonas europaea ATCC 19718 dihydroneopterin aldolase NP_840317.1 255613 R 228410 CDS NP_840318.1 30248248 1081151 256051..256653 1 NC_004757.1 hypothetical protein 256653 1081151 NE0224 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840318.1 256051 D 228410 CDS NP_840319.1 30248249 1081152 complement(256662..257675) 1 NC_004757.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 257675 gcp 1081152 gcp Nitrosomonas europaea ATCC 19718 DNA-binding/iron metalloprotein/AP endonuclease NP_840319.1 256662 R 228410 CDS NP_840320.1 30248250 1081153 257934..258146 1 NC_004757.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 258146 rpsU 1081153 rpsU Nitrosomonas europaea ATCC 19718 30S ribosomal protein S21 NP_840320.1 257934 D 228410 CDS NP_840321.1 30248251 1081154 258184..258630 1 NC_004757.1 hypothetical protein 258630 1081154 NE0227 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840321.1 258184 D 228410 CDS NP_840322.1 30248252 1081155 258712..260514 1 NC_004757.1 CHC2 zinc finger 260514 1081155 NE0228 Nitrosomonas europaea ATCC 19718 CHC2 zinc finger NP_840322.1 258712 D 228410 CDS NP_840323.1 30248253 1081156 260721..262976 1 NC_004757.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 262976 rpoD 1081156 rpoD Nitrosomonas europaea ATCC 19718 RNA polymerase sigma factor RpoD NP_840323.1 260721 D 228410 CDS NP_840324.1 30248254 1081158 263504..263815 1 NC_004757.1 hypothetical protein 263815 1081158 NE0230 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840324.1 263504 D 228410 CDS NP_840325.1 30248255 1081159 complement(263808..264437) 1 NC_004757.1 hypothetical protein 264437 1081159 NE0231 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840325.1 263808 R 228410 CDS NP_840326.1 30248256 1081160 complement(265780..267168) 1 NC_004757.1 hypothetical protein 267168 1081160 NE0232 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840326.1 265780 R 228410 CDS NP_840327.1 30248257 1081161 complement(267165..268085) 1 NC_004757.1 TOPRIM domain-containing protein 268085 1081161 NE0233 Nitrosomonas europaea ATCC 19718 TOPRIM domain-containing protein NP_840327.1 267165 R 228410 CDS NP_840328.1 30248258 1081162 complement(268394..268966) 1 NC_004757.1 hypothetical protein 268966 1081162 NE0234 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840328.1 268394 R 228410 CDS NP_840329.1 30248259 1081163 complement(268953..270203) 1 NC_004757.1 Phage integrase 270203 intF 1081163 intF Nitrosomonas europaea ATCC 19718 Phage integrase NP_840329.1 268953 R 228410 CDS NP_840330.1 30248260 1081164 complement(270335..271894) 1 NC_004757.1 site-specific recombinase 271894 ccrB 1081164 ccrB Nitrosomonas europaea ATCC 19718 site-specific recombinase NP_840330.1 270335 R 228410 CDS NP_840331.1 30248261 1081165 complement(271908..272234) 1 NC_004757.1 hypothetical protein 272234 1081165 NE0237 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840331.1 271908 R 228410 CDS NP_840332.1 30248262 1081166 complement(272567..273130) 1 NC_004757.1 hypothetical protein 273130 1081166 NE0238 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840332.1 272567 R 228410 CDS NP_840333.1 30248263 1081167 273266..274309 1 NC_004757.1 integrase catalytic subunit 274309 1081167 NE0239 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840333.1 273266 D 228410 CDS NP_840334.1 30248264 1081168 complement(274352..277450) 1 NC_004757.1 hypothetical protein 277450 1081168 NE0240 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840334.1 274352 R 228410 CDS NP_840335.1 30248265 1081169 complement(277612..277908) 1 NC_004757.1 hypothetical protein 277908 1081169 NE0241 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840335.1 277612 R 228410 CDS NP_840336.1 30248266 1081170 278147..278509 1 NC_004757.1 hypothetical protein 278509 1081170 NE0242 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840336.1 278147 D 228410 CDS NP_840337.1 30248267 1081171 278643..279698 1 NC_004757.1 hypothetical protein 279698 1081171 NE0243 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840337.1 278643 D 228410 CDS NP_840338.1 30248268 1081172 complement(280152..281465) 1 NC_004757.1 integrase catalytic subunit 281465 1081172 NE0244 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840338.1 280152 R 228410 CDS NP_840339.1 30248269 1081173 281568..282023 1 NC_004757.1 hypothetical protein 282023 1081173 NE0245 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840339.1 281568 D 228410 CDS NP_840340.1 30248270 1081174 282027..283664 1 NC_004757.1 TRAG protein 283664 1081174 NE0246 Nitrosomonas europaea ATCC 19718 TRAG protein NP_840340.1 282027 D 228410 CDS NP_840341.1 30248271 1081179 285943..287463 1 NC_004757.1 hypothetical protein 287463 1081179 NE0251 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840341.1 285943 D 228410 CDS NP_840342.1 30248272 1081180 287757..288080 1 NC_004757.1 transposase IS911 288080 1081180 NE0252 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_840342.1 287757 D 228410 CDS NP_840343.1 30248273 1081181 288134..288985 1 NC_004757.1 integrase catalytic subunit 288985 1081181 NE0253 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840343.1 288134 D 228410 CDS NP_840344.1 30248274 1081182 complement(289300..290343) 1 NC_004757.1 integrase catalytic subunit 290343 1081182 NE0254 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840344.1 289300 R 228410 CDS NP_840345.1 30248275 1081183 complement(290453..291271) 1 NC_004757.1 hypothetical protein 291271 1081183 NE0255 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840345.1 290453 R 228410 CDS NP_840346.1 30248276 1081184 complement(291347..292789) 1 NC_004757.1 hypothetical protein 292789 1081184 NE0256 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840346.1 291347 R 228410 CDS NP_840347.1 30248277 1081185 complement(293167..293799) 1 NC_004757.1 site-specific recombinase 293799 1081185 NE0257 Nitrosomonas europaea ATCC 19718 site-specific recombinase NP_840347.1 293167 R 228410 CDS NP_840348.1 30248278 1081186 294019..294411 1 NC_004757.1 hypothetical protein 294411 1081186 NE0258 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840348.1 294019 D 228410 CDS NP_840349.1 30248279 1081187 complement(294413..295210) 1 NC_004757.1 hypothetical protein 295210 1081187 NE0259 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840349.1 294413 R 228410 CDS NP_840350.1 30248280 1081188 295737..296252 1 NC_004757.1 antirestriction protein 296252 1081188 NE0260 Nitrosomonas europaea ATCC 19718 antirestriction protein NP_840350.1 295737 D 228410 CDS NP_840351.1 30248281 1081189 complement(296385..296678) 1 NC_004757.1 plasmid stabilization element ParE 296678 1081189 NE0261 Nitrosomonas europaea ATCC 19718 plasmid stabilization element ParE NP_840351.1 296385 R 228410 CDS NP_840352.1 30248282 1081190 complement(296679..296921) 1 NC_004757.1 hypothetical protein 296921 1081190 NE0262 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840352.1 296679 R 228410 CDS NP_840353.1 30248283 1081191 297181..297603 1 NC_004757.1 ArsR family regulatory protein 297603 1081191 NE0263 Nitrosomonas europaea ATCC 19718 ArsR family regulatory protein NP_840353.1 297181 D 228410 CDS NP_840354.1 30248284 1081192 297584..298096 1 NC_004757.1 hypothetical protein 298096 1081192 NE0264 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840354.1 297584 D 228410 CDS NP_840355.1 30248285 1081193 298118..298369 1 NC_004757.1 hypothetical protein 298369 1081193 NE0265 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840355.1 298118 D 228410 CDS NP_840356.1 30248286 1081194 298392..298871 1 NC_004757.1 hypothetical protein 298871 1081194 NE0266 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840356.1 298392 D 228410 CDS NP_840357.1 30248287 1081195 298950..299336 1 NC_004757.1 hypothetical protein 299336 1081195 NE0267 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840357.1 298950 D 228410 CDS NP_840358.1 30248288 1081196 complement(299643..300686) 1 NC_004757.1 integrase catalytic subunit 300686 1081196 NE0268 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840358.1 299643 R 228410 CDS NP_840359.1 30248289 1081198 complement(302132..302503) 1 NC_004757.1 hypothetical protein 302503 1081198 NE0270 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840359.1 302132 R 228410 CDS NP_840360.1 30248290 1081199 complement(302885..303253) 1 NC_004757.1 IS4 family transposase 303253 1081199 NE0271 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_840360.1 302885 R 228410 CDS NP_840361.1 30248291 1081200 complement(303253..303660) 1 NC_004757.1 transposase 303660 1081200 NE0272 Nitrosomonas europaea ATCC 19718 transposase NP_840361.1 303253 R 228410 CDS NP_840362.1 30248292 1081201 complement(303853..304488) 1 NC_004757.1 cytochrome c, class IC:cytochrome c, class I 304488 cyc 1081201 cyc Nitrosomonas europaea ATCC 19718 cytochrome c, class IC:cytochrome c, class I NP_840362.1 303853 R 228410 CDS NP_840363.1 30248293 1081202 304595..305197 1 NC_004757.1 hypothetical protein 305197 1081202 NE0274 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840363.1 304595 D 228410 CDS NP_840364.1 30248294 1081203 305311..306129 1 NC_004757.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 306129 map 1081203 map Nitrosomonas europaea ATCC 19718 methionine aminopeptidase NP_840364.1 305311 D 228410 CDS NP_840365.1 30248295 1081204 306197..306922 1 NC_004757.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 306922 rph 1081204 rph Nitrosomonas europaea ATCC 19718 ribonuclease PH NP_840365.1 306197 D 228410 CDS NP_840366.1 30248296 1081205 306960..307571 1 NC_004757.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 307571 1081205 NE0277 Nitrosomonas europaea ATCC 19718 deoxyribonucleotide triphosphate pyrophosphatase NP_840366.1 306960 D 228410 CDS NP_840367.1 30248297 1081206 307608..308807 1 NC_004757.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 308807 1081206 NE0278 Nitrosomonas europaea ATCC 19718 coproporphyrinogen III oxidase NP_840367.1 307608 D 228410 CDS NP_840368.1 30248298 1081207 308979..310820 1 NC_004757.1 multicopper oxidase type 1 310820 pcoA 1081207 pcoA Nitrosomonas europaea ATCC 19718 multicopper oxidase type 1 NP_840368.1 308979 D 228410 CDS NP_840369.1 30248299 1081208 310817..311620 1 NC_004757.1 copper resistance protein B 311620 pcoB 1081208 pcoB Nitrosomonas europaea ATCC 19718 copper resistance protein B NP_840369.1 310817 D 228410 CDS NP_840370.1 30248300 1081209 complement(311656..312597) 1 NC_004757.1 hypothetical protein 312597 1081209 NE0281 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840370.1 311656 R 228410 CDS NP_840371.1 30248301 1081210 complement(312610..313188) 1 NC_004757.1 hypothetical protein 313188 1081210 NE0282 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840371.1 312610 R 228410 CDS NP_840372.1 30248302 1081211 complement(313307..313981) 1 NC_004757.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 313981 trmB 1081211 trmB Nitrosomonas europaea ATCC 19718 tRNA (guanine-N(7)-)-methyltransferase NP_840372.1 313307 R 228410 CDS NP_840373.1 30248303 1081212 complement(314010..314816) 1 NC_004757.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 314816 thiG 1081212 thiG Nitrosomonas europaea ATCC 19718 thiazole synthase NP_840373.1 314010 R 228410 CDS NP_840374.1 30248304 1081213 complement(314891..315091) 1 NC_004757.1 hypothetical protein 315091 1081213 NE0285 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840374.1 314891 R 228410 CDS NP_840375.1 30248305 1081214 315293..315781 1 NC_004757.1 hypothetical protein 315781 1081214 NE0286 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840375.1 315293 D 228410 CDS NP_840376.1 30248306 1081215 complement(315850..316254) 1 NC_004757.1 PilT domain-containing protein 316254 vapC 1081215 vapC Nitrosomonas europaea ATCC 19718 PilT domain-containing protein NP_840376.1 315850 R 228410 CDS NP_840377.1 30248307 1081216 316357..317307 1 NC_004757.1 integrase catalytic subunit 317307 1081216 NE0288 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840377.1 316357 D 228410 CDS NP_840378.1 30248308 1081217 complement(317296..317502) 1 NC_004757.1 CopG family transcriptional regulator 317502 1081217 NE0289 Nitrosomonas europaea ATCC 19718 CopG family transcriptional regulator NP_840378.1 317296 R 228410 CDS NP_840379.1 30248309 1081221 complement(319812..320270) 1 NC_004757.1 hypothetical protein 320270 1081221 NE0292 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840379.1 319812 R 228410 CDS NP_840380.1 30248310 1081222 complement(320270..320587) 1 NC_004757.1 hypothetical protein 320587 1081222 NE0293 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840380.1 320270 R 228410 CDS NP_840381.1 30248311 1081223 320869..322812 1 NC_004757.1 cytochrome c, class I 322812 1081223 NE0294 Nitrosomonas europaea ATCC 19718 cytochrome c, class I NP_840381.1 320869 D 228410 CDS NP_840382.1 30248312 1081224 322928..323662 1 NC_004757.1 hypothetical protein 323662 1081224 NE0295 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840382.1 322928 D 228410 CDS NP_840383.1 30248313 1081225 323659..325191 1 NC_004757.1 hypothetical protein 325191 1081225 NE0296 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840383.1 323659 D 228410 CDS NP_840384.1 30248314 1081226 325196..326146 1 NC_004757.1 hypothetical protein 326146 1081226 NE0297 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840384.1 325196 D 228410 CDS NP_840385.1 30248315 1081227 complement(326321..328408) 1 NC_004757.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 328408 pta 1081227 pta Nitrosomonas europaea ATCC 19718 phosphate acetyltransferase NP_840385.1 326321 R 228410 CDS NP_840386.1 30248316 1081228 complement(328739..329794) 1 NC_004757.1 hypothetical protein 329794 1081228 NE0299 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840386.1 328739 R 228410 CDS NP_840387.1 30248317 1081229 complement(329852..330493) 1 NC_004757.1 TetR family regulatory protein 330493 1081229 NE0300 Nitrosomonas europaea ATCC 19718 TetR family regulatory protein NP_840387.1 329852 R 228410 CDS NP_840388.1 30248318 1081230 complement(330635..331327) 1 NC_004757.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 331327 flgA 1081230 flgA Nitrosomonas europaea ATCC 19718 flagellar basal body P-ring biosynthesis protein FlgA NP_840388.1 330635 R 228410 CDS NP_840389.1 30248319 1081231 331550..331963 1 NC_004757.1 flagella basal body rod protein 331963 flgB 1081231 flgB Nitrosomonas europaea ATCC 19718 flagella basal body rod protein NP_840389.1 331550 D 228410 CDS NP_840390.1 30248320 1081232 331969..332373 1 NC_004757.1 flagella basal body rod protein 332373 flgC 1081232 flgC Nitrosomonas europaea ATCC 19718 flagella basal body rod protein NP_840390.1 331969 D 228410 CDS NP_840391.1 30248321 1081233 332390..333061 1 NC_004757.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 333061 flgD 1081233 flgD Nitrosomonas europaea ATCC 19718 flagellar basal body rod modification protein NP_840391.1 332390 D 228410 CDS NP_840392.1 30248322 1081234 333076..334308 1 NC_004757.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 334308 flgE 1081234 flgE Nitrosomonas europaea ATCC 19718 flagellar hook protein FlgE NP_840392.1 333076 D 228410 CDS NP_840393.1 30248323 1081235 334348..335091 1 NC_004757.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 335091 flgF 1081235 flgF Nitrosomonas europaea ATCC 19718 flagellar basal body rod protein FlgF NP_840393.1 334348 D 228410 CDS NP_840394.1 30248324 1081236 335159..335941 1 NC_004757.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 335941 flgG 1081236 flgG Nitrosomonas europaea ATCC 19718 flagellar basal body rod protein FlgG NP_840394.1 335159 D 228410 CDS NP_840395.1 30248325 1081237 335979..336773 1 NC_004757.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein 336773 flgH 1081237 flgH Nitrosomonas europaea ATCC 19718 flagellar basal body L-ring protein NP_840395.1 335979 D 228410 CDS NP_840396.1 30248326 1081238 336795..337907 1 NC_004757.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 337907 flgI 1081238 flgI Nitrosomonas europaea ATCC 19718 flagellar basal body P-ring protein NP_840396.1 336795 D 228410 CDS NP_840397.1 30248327 1081239 338080..339093 1 NC_004757.1 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 339093 flgJ 1081239 flgJ Nitrosomonas europaea ATCC 19718 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase NP_840397.1 338080 D 228410 CDS NP_840398.1 30248328 1081240 339275..340675 1 NC_004757.1 flagella basal body rod protein 340675 flgK 1081240 flgK Nitrosomonas europaea ATCC 19718 flagella basal body rod protein NP_840398.1 339275 D 228410 CDS NP_840399.1 30248329 1081241 340704..341603 1 NC_004757.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella; flagellar hook-associated protein FlgL 341603 flgL 1081241 flgL Nitrosomonas europaea ATCC 19718 flagellar hook-associated protein FlgL NP_840399.1 340704 D 228410 CDS NP_840400.1 30248330 1081242 341681..342325 1 NC_004757.1 hypothetical protein 342325 1081242 NE0313 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840400.1 341681 D 228410 CDS NP_840401.1 30248331 1081243 342677..343333 1 NC_004757.1 hypothetical protein 343333 1081243 NE0314 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840401.1 342677 D 228410 CDS NP_840402.1 30248332 1081244 343351..349011 1 NC_004757.1 multicopper oxidase 349011 mnxG 1081244 mnxG Nitrosomonas europaea ATCC 19718 multicopper oxidase NP_840402.1 343351 D 228410 CDS NP_840403.1 30248333 1081245 complement(349079..350209) 1 NC_004757.1 hypothetical protein 350209 1081245 NE0316 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840403.1 349079 R 228410 CDS NP_840404.1 30248334 1081246 complement(350349..351092) 1 NC_004757.1 response regulator 351092 1081246 NE0317 Nitrosomonas europaea ATCC 19718 response regulator NP_840404.1 350349 R 228410 CDS NP_840405.1 30248335 1081247 351852..352649 1 NC_004757.1 hypothetical protein 352649 1081247 NE0318 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840405.1 351852 D 228410 CDS NP_840406.1 30248336 1081248 352869..353432 1 NC_004757.1 hypothetical protein 353432 1081248 NE0319 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840406.1 352869 D 228410 CDS NP_840407.1 30248337 1081249 353453..353983 1 NC_004757.1 N-acetyltransferase GCN5 353983 1081249 NE0320 Nitrosomonas europaea ATCC 19718 N-acetyltransferase GCN5 NP_840407.1 353453 D 228410 CDS NP_840408.1 30248338 1081250 354186..356378 1 NC_004757.1 TonB-dependent receptor protein 356378 1081250 NE0321 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840408.1 354186 D 228410 CDS NP_840409.1 30248339 1081251 356743..357015 1 NC_004757.1 hypothetical protein 357015 1081251 NE0322 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840409.1 356743 D 228410 CDS NP_840410.1 30248340 1081252 357104..359209 1 NC_004757.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 359209 1081252 NE0323 Nitrosomonas europaea ATCC 19718 polyphosphate kinase NP_840410.1 357104 D 228410 CDS NP_840411.1 30248341 1081253 complement(359298..360362) 1 NC_004757.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 360362 cbbA 1081253 cbbA Nitrosomonas europaea ATCC 19718 fructose-1,6-bisphosphate aldolase NP_840411.1 359298 R 228410 CDS NP_840412.1 30248342 1081254 complement(360561..362051) 1 NC_004757.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 362051 pykA1 1081254 pykA1 Nitrosomonas europaea ATCC 19718 pyruvate kinase NP_840412.1 360561 R 228410 CDS NP_840413.1 30248343 1081255 complement(362086..363264) 1 NC_004757.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 363264 pgk 1081255 pgk Nitrosomonas europaea ATCC 19718 phosphoglycerate kinase NP_840413.1 362086 R 228410 CDS NP_840414.1 30248344 1081256 complement(363571..364572) 1 NC_004757.1 glyceraldehyde 3-phosphate dehydrogenase 364572 cbbG 1081256 cbbG Nitrosomonas europaea ATCC 19718 glyceraldehyde 3-phosphate dehydrogenase NP_840414.1 363571 R 228410 CDS NP_840415.1 30248345 1081257 complement(364636..366654) 1 NC_004757.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 366654 cbbT 1081257 cbbT Nitrosomonas europaea ATCC 19718 transketolase NP_840415.1 364636 R 228410 CDS NP_840416.1 30248346 1081259 367095..368258 1 NC_004757.1 MoaA/nifB/pqqE family protein 368258 1081259 NE0329 Nitrosomonas europaea ATCC 19718 MoaA/nifB/pqqE family protein NP_840416.1 367095 D 228410 CDS NP_840417.1 30248347 1081260 368308..369438 1 NC_004757.1 glycosyl transferase family protein 369438 1081260 NE0330 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_840417.1 368308 D 228410 CDS NP_840418.1 30248348 1081261 369467..370048 1 NC_004757.1 periplasmic transport protein 370048 1081261 NE0331 Nitrosomonas europaea ATCC 19718 periplasmic transport protein NP_840418.1 369467 D 228410 CDS NP_840419.1 30248349 1081262 370118..372664 1 NC_004757.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 372664 gyrA 1081262 gyrA Nitrosomonas europaea ATCC 19718 DNA gyrase subunit A NP_840419.1 370118 D 228410 CDS NP_840420.1 30248350 1081263 372682..373788 1 NC_004757.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 373788 serC 1081263 serC Nitrosomonas europaea ATCC 19718 phosphoserine aminotransferase NP_840420.1 372682 D 228410 CDS NP_840421.1 30248351 1081264 373781..374992 1 NC_004757.1 D-isomer specific 2-hydroxyacid dehydrogenase 374992 1081264 NE0334 Nitrosomonas europaea ATCC 19718 D-isomer specific 2-hydroxyacid dehydrogenase NP_840421.1 373781 D 228410 CDS NP_840422.1 30248352 1081265 375031..376098 1 NC_004757.1 prephenate dehydratase/chorismate mutase 376098 pheA 1081265 pheA Nitrosomonas europaea ATCC 19718 prephenate dehydratase/chorismate mutase NP_840422.1 375031 D 228410 CDS NP_840423.1 30248353 1081266 376139..377260 1 NC_004757.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 377260 hisC2 1081266 hisC2 Nitrosomonas europaea ATCC 19718 histidinol-phosphate aminotransferase NP_840423.1 376139 D 228410 CDS NP_840424.1 30248354 1081267 377283..378185 1 NC_004757.1 prephenate dehydrogenase 378185 tyrA 1081267 tyrA Nitrosomonas europaea ATCC 19718 prephenate dehydrogenase NP_840424.1 377283 D 228410 CDS NP_840425.1 30248355 1081268 complement(378223..379188) 1 NC_004757.1 phage integrase domain/SAM domain-containing protein 379188 sss 1081268 sss Nitrosomonas europaea ATCC 19718 phage integrase domain/SAM domain-containing protein NP_840425.1 378223 R 228410 CDS NP_840426.1 30248356 1081269 complement(379172..379885) 1 NC_004757.1 hypothetical protein 379885 1081269 NE0339 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840426.1 379172 R 228410 CDS NP_840427.1 30248357 1081270 complement(379941..380891) 1 NC_004757.1 integrase catalytic subunit 380891 1081270 NE0340 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840427.1 379941 R 228410 CDS NP_840428.1 30248358 1081271 complement(380952..381320) 1 NC_004757.1 IS4 family transposase 381320 1081271 NE0341 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_840428.1 380952 R 228410 CDS NP_840429.1 30248359 1081272 complement(381289..381726) 1 NC_004757.1 transposase 381726 1081272 NE0342 Nitrosomonas europaea ATCC 19718 transposase NP_840429.1 381289 R 228410 CDS NP_840430.1 30248360 1081273 complement(382383..383768) 1 NC_004757.1 sensory transduction histidine kinase 383768 1081273 NE0343 Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_840430.1 382383 R 228410 CDS NP_840431.1 30248361 1081274 complement(383765..384436) 1 NC_004757.1 response regulator 384436 tctD 1081274 tctD Nitrosomonas europaea ATCC 19718 response regulator NP_840431.1 383765 R 228410 CDS NP_840432.1 30248362 1081275 complement(384524..387652) 1 NC_004757.1 acriflavin resistance protein:heavy metal efflux pump CzcA 387652 1081275 NE0345 Nitrosomonas europaea ATCC 19718 acriflavin resistance protein:heavy metal efflux pump CzcA NP_840432.1 384524 R 228410 CDS NP_840433.1 30248363 1081276 complement(387654..388835) 1 NC_004757.1 cation transporter transmembrane protein 388835 1081276 NE0346 Nitrosomonas europaea ATCC 19718 cation transporter transmembrane protein NP_840433.1 387654 R 228410 CDS NP_840434.1 30248364 1081277 complement(389130..390107) 1 NC_004757.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 390107 speE 1081277 speE Nitrosomonas europaea ATCC 19718 spermidine synthase NP_840434.1 389130 R 228410 CDS NP_840435.1 30248365 1081278 complement(390104..390544) 1 NC_004757.1 hypothetical protein 390544 1081278 NE0348 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840435.1 390104 R 228410 CDS NP_840436.1 30248366 1081279 complement(390828..391859) 1 NC_004757.1 hypothetical protein 391859 1081279 NE0349 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840436.1 390828 R 228410 CDS NP_840437.1 30248367 1081281 392344..394545 1 NC_004757.1 rnr; exoribonuclease RNAse R (vacB protein) 394545 rnr 1081281 rnr Nitrosomonas europaea ATCC 19718 rnr; exoribonuclease RNAse R (vacB protein) NP_840437.1 392344 D 228410 CDS NP_840438.1 30248368 1081282 394569..395351 1 NC_004757.1 tRNA/rRNA methyltransferase 395351 1081282 NE0351 Nitrosomonas europaea ATCC 19718 tRNA/rRNA methyltransferase NP_840438.1 394569 D 228410 CDS NP_840439.1 30248369 1081283 complement(395460..395888) 1 NC_004757.1 biopolymer transport protein ExbD/TolR 395888 exbD1 1081283 exbD1 Nitrosomonas europaea ATCC 19718 biopolymer transport protein ExbD/TolR NP_840439.1 395460 R 228410 CDS NP_840440.1 30248370 1081284 complement(395888..396688) 1 NC_004757.1 MotA/TolQ/ExbB proton channel family protein 396688 exbB1 1081284 exbB1 Nitrosomonas europaea ATCC 19718 MotA/TolQ/ExbB proton channel family protein NP_840440.1 395888 R 228410 CDS NP_840441.1 30248371 1081285 complement(396689..397408) 1 NC_004757.1 TonB protein 397408 1081285 NE0354 Nitrosomonas europaea ATCC 19718 TonB protein NP_840441.1 396689 R 228410 CDS NP_840442.1 30248372 1081286 complement(397628..399073) 1 NC_004757.1 ribonuclease E/G 399073 cafA 1081286 cafA Nitrosomonas europaea ATCC 19718 ribonuclease E/G NP_840442.1 397628 R 228410 CDS NP_840443.1 30248373 1081287 complement(399111..399734) 1 NC_004757.1 Maf-like protein 399734 1081287 NE0356 Nitrosomonas europaea ATCC 19718 Maf-like protein NP_840443.1 399111 R 228410 CDS NP_840444.1 30248374 1081288 complement(399820..400290) 1 NC_004757.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 400290 1081288 NE0357 Nitrosomonas europaea ATCC 19718 rRNA large subunit methyltransferase NP_840444.1 399820 R 228410 CDS NP_840445.1 30248375 1081289 complement(400387..400752) 1 NC_004757.1 hypothetical protein 400752 1081289 NE0358 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840445.1 400387 R 228410 CDS NP_840446.1 30248376 1081290 complement(400749..401432) 1 NC_004757.1 cytidylyltransferase 401432 nadD 1081290 nadD Nitrosomonas europaea ATCC 19718 cytidylyltransferase NP_840446.1 400749 R 228410 CDS NP_840447.1 30248377 1081291 complement(401482..402843) 1 NC_004757.1 branched-chain alpha-keto acid dehydrogenase subunit E2 402843 aceF 1081291 aceF Nitrosomonas europaea ATCC 19718 branched-chain alpha-keto acid dehydrogenase subunit E2 NP_840447.1 401482 R 228410 CDS NP_840448.1 30248378 1081292 complement(402913..405570) 1 NC_004757.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 405570 aceE 1081292 aceE Nitrosomonas europaea ATCC 19718 pyruvate dehydrogenase subunit E1 NP_840448.1 402913 R 228410 CDS NP_840449.1 30248379 1081293 complement(405604..406491) 1 NC_004757.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 406491 folD 1081293 folD Nitrosomonas europaea ATCC 19718 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase NP_840449.1 405604 R 228410 CDS NP_840450.1 30248380 1081294 complement(406644..407303) 1 NC_004757.1 hypothetical protein 407303 1081294 NE0363 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840450.1 406644 R 228410 CDS NP_840451.1 30248381 1081295 407590..409350 1 NC_004757.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 409350 argS 1081295 argS Nitrosomonas europaea ATCC 19718 arginyl-tRNA synthetase NP_840451.1 407590 D 228410 CDS NP_840452.1 30248382 1081296 409374..410021 1 NC_004757.1 hypothetical protein 410021 1081296 NE0365 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840452.1 409374 D 228410 CDS NP_840453.1 30248383 1081297 410162..410812 1 NC_004757.1 thioredoxin:DSBA oxidoreductase 410812 dsbA 1081297 dsbA Nitrosomonas europaea ATCC 19718 thioredoxin:DSBA oxidoreductase NP_840453.1 410162 D 228410 CDS NP_840454.1 30248384 1081298 complement(410825..411508) 1 NC_004757.1 hypothetical protein 411508 1081298 NE0367 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840454.1 410825 R 228410 CDS NP_840455.1 30248385 1081299 complement(411527..413692) 1 NC_004757.1 p)ppGpp synthetase I SpoT 413692 spoT 1081299 spoT Nitrosomonas europaea ATCC 19718 p)ppGpp synthetase I SpoT NP_840455.1 411527 R 228410 CDS NP_840456.1 30248386 1081301 414532..414894 1 NC_004757.1 hypothetical protein 414894 1081301 NE0369 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840456.1 414532 D 228410 CDS NP_840457.1 30248387 1081302 complement(414982..416157) 1 NC_004757.1 NAD binding site:D-amino acid oxidase 416157 eryB 1081302 eryB Nitrosomonas europaea ATCC 19718 NAD binding site:D-amino acid oxidase NP_840457.1 414982 R 228410 CDS NP_840458.1 30248388 1081303 complement(416165..416899) 1 NC_004757.1 glycerophosphoryl diester phosphodiesterase 416899 1081303 NE0371 Nitrosomonas europaea ATCC 19718 glycerophosphoryl diester phosphodiesterase NP_840458.1 416165 R 228410 CDS NP_840459.1 30248389 1081304 417013..417669 1 NC_004757.1 hypothetical protein 417669 1081304 NE0372 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840459.1 417013 D 228410 CDS NP_840460.1 30248390 1081305 417711..418967 1 NC_004757.1 Outer membrane efflux protein 418967 1081305 NE0373 Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_840460.1 417711 D 228410 CDS NP_840461.1 30248391 1081306 418977..420140 1 NC_004757.1 cation efflux protein 420140 1081306 NE0374 Nitrosomonas europaea ATCC 19718 cation efflux protein NP_840461.1 418977 D 228410 CDS NP_840462.1 30248392 1081307 420140..423244 1 NC_004757.1 acriflavin resistance protein:heavy metal efflux pump CzcA 423244 1081307 NE0375 Nitrosomonas europaea ATCC 19718 acriflavin resistance protein:heavy metal efflux pump CzcA NP_840462.1 420140 D 228410 CDS NP_840463.1 30248393 1081308 complement(423285..425162) 1 NC_004757.1 ABC transporter ATP-binding protein/permease 425162 1081308 NE0376 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein/permease NP_840463.1 423285 R 228410 CDS NP_840464.1 30248394 1081309 complement(425394..427445) 1 NC_004757.1 sensory transduction histidine kinase 427445 1081309 NE0377 Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_840464.1 425394 R 228410 CDS NP_840465.1 30248395 1081310 complement(427483..428772) 1 NC_004757.1 sugar transferase 428772 1081310 NE0378 Nitrosomonas europaea ATCC 19718 sugar transferase NP_840465.1 427483 R 228410 CDS NP_840466.1 30248396 1081311 complement(428969..429808) 1 NC_004757.1 serine protease 429808 mucD 1081311 mucD Nitrosomonas europaea ATCC 19718 serine protease NP_840466.1 428969 R 228410 CDS NP_840467.1 30248397 1081313 430161..431546 1 NC_004757.1 Iron-sulfur-dependent L-serine dehydratase single chain form 431546 1081313 NE0380 Nitrosomonas europaea ATCC 19718 Iron-sulfur-dependent L-serine dehydratase single chain form NP_840467.1 430161 D 228410 CDS NP_840468.1 30248398 1081314 431853..432797 1 NC_004757.1 hypothetical protein 432797 1081314 NE0381 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840468.1 431853 D 228410 CDS NP_840469.1 30248399 1081315 complement(432929..436078) 1 NC_004757.1 restriction enzyme type I helicase subunits and related helicases 436078 hsdR 1081315 hsdR Nitrosomonas europaea ATCC 19718 restriction enzyme type I helicase subunits and related helicases NP_840469.1 432929 R 228410 CDS NP_840470.1 30248400 1081316 complement(436075..437568) 1 NC_004757.1 hypothetical protein 437568 1081316 NE0383 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840470.1 436075 R 228410 CDS NP_840471.1 30248401 1081317 complement(437565..438905) 1 NC_004757.1 restriction modification system, type I 438905 1081317 NE0384 Nitrosomonas europaea ATCC 19718 restriction modification system, type I NP_840471.1 437565 R 228410 CDS NP_840472.1 30248402 1081318 complement(438895..440610) 1 NC_004757.1 hsdM; site-specific DNA-methyltransferase, type I modification 440610 hsdM 1081318 hsdM Nitrosomonas europaea ATCC 19718 hsdM; site-specific DNA-methyltransferase, type I modification NP_840472.1 438895 R 228410 CDS NP_840473.1 30248403 1081319 complement(440772..442127) 1 NC_004757.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 442127 trmE 1081319 trmE Nitrosomonas europaea ATCC 19718 tRNA modification GTPase TrmE NP_840473.1 440772 R 228410 CDS NP_840474.1 30248404 1081320 complement(442186..444030) 1 NC_004757.1 hypothetical protein 444030 1081320 NE0387 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840474.1 442186 R 228410 CDS NP_840475.1 30248405 1081321 complement(444123..444332) 1 NC_004757.1 hypothetical protein 444332 1081321 NE0388 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840475.1 444123 R 228410 CDS NP_840476.1 30248406 1081322 complement(444329..444688) 1 NC_004757.1 ribonuclease P protein 444688 rnpA 1081322 rnpA Nitrosomonas europaea ATCC 19718 ribonuclease P protein NP_840476.1 444329 R 228410 CDS NP_840477.1 30248407 1081323 complement(444728..444862) 1 NC_004757.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 444862 rpmH 1081323 rpmH Nitrosomonas europaea ATCC 19718 50S ribosomal protein L34 NP_840477.1 444728 R 228410 CDS NP_840478.1 30248408 1081324 445146..445607 1 NC_004757.1 hypothetical protein 445607 1081324 NE0391 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840478.1 445146 D 228410 CDS NP_840479.1 30248409 1081325 445647..445862 1 NC_004757.1 hypothetical protein 445862 1081325 NE0392 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840479.1 445647 D 228410 CDS NP_840480.1 30248410 1081326 445939..446751 1 NC_004757.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 446751 proC 1081326 proC Nitrosomonas europaea ATCC 19718 pyrroline-5-carboxylate reductase NP_840480.1 445939 D 228410 CDS NP_840481.1 30248411 1081327 446809..447369 1 NC_004757.1 hypothetical protein 447369 1081327 NE0394 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840481.1 446809 D 228410 CDS NP_840482.1 30248412 1081328 447369..447671 1 NC_004757.1 hypothetical protein 447671 1081328 NE0395 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840482.1 447369 D 228410 CDS NP_840483.1 30248413 1081329 447786..448868 1 NC_004757.1 hypothetical protein 448868 1081329 NE0396 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840483.1 447786 D 228410 CDS NP_840484.1 30248414 1081330 448948..449862 1 NC_004757.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 449862 1081330 NE0397 Nitrosomonas europaea ATCC 19718 6-phosphogluconate dehydrogenase NP_840484.1 448948 D 228410 CDS NP_840485.1 30248415 1081331 449859..451349 1 NC_004757.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 451349 zwf 1081331 zwf Nitrosomonas europaea ATCC 19718 glucose-6-phosphate 1-dehydrogenase NP_840485.1 449859 D 228410 CDS NP_840486.1 30248416 1081335 451898..453088 1 NC_004757.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 453088 tuf2 1081335 tuf2 Nitrosomonas europaea ATCC 19718 elongation factor Tu NP_840486.1 451898 D 228410 CDS NP_840487.1 30248417 1081336 453150..453458 1 NC_004757.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 453458 rpsJ 1081336 rpsJ Nitrosomonas europaea ATCC 19718 30S ribosomal protein S10 NP_840487.1 453150 D 228410 CDS NP_840488.1 30248418 1081337 453506..454153 1 NC_004757.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 454153 rplC 1081337 rplC Nitrosomonas europaea ATCC 19718 50S ribosomal protein L3 NP_840488.1 453506 D 228410 CDS NP_840489.1 30248419 1081338 454174..454794 1 NC_004757.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 454794 rplD 1081338 rplD Nitrosomonas europaea ATCC 19718 50S ribosomal protein L4 NP_840489.1 454174 D 228410 CDS NP_840490.1 30248420 1081339 454791..455126 1 NC_004757.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 455126 rplW 1081339 rplW Nitrosomonas europaea ATCC 19718 50S ribosomal protein L23 NP_840490.1 454791 D 228410 CDS NP_840491.1 30248421 1081340 455123..455959 1 NC_004757.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 455959 rplB 1081340 rplB Nitrosomonas europaea ATCC 19718 50S ribosomal protein L2 NP_840491.1 455123 D 228410 CDS NP_840492.1 30248422 1081341 455965..456249 1 NC_004757.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 456249 rpsS 1081341 rpsS Nitrosomonas europaea ATCC 19718 30S ribosomal protein S19 NP_840492.1 455965 D 228410 CDS NP_840493.1 30248423 1081342 456258..456590 1 NC_004757.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 456590 rplV 1081342 rplV Nitrosomonas europaea ATCC 19718 50S ribosomal protein L22 NP_840493.1 456258 D 228410 CDS NP_840494.1 30248424 1081343 456627..457274 1 NC_004757.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 457274 rpsC 1081343 rpsC Nitrosomonas europaea ATCC 19718 30S ribosomal protein S3 NP_840494.1 456627 D 228410 CDS NP_840495.1 30248425 1081344 457364..457780 1 NC_004757.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 457780 rplP 1081344 rplP Nitrosomonas europaea ATCC 19718 50S ribosomal protein L16 NP_840495.1 457364 D 228410 CDS NP_840496.1 30248426 1081345 457788..457982 1 NC_004757.1 50S ribosomal protein L29 457982 rpmC 1081345 rpmC Nitrosomonas europaea ATCC 19718 50S ribosomal protein L29 NP_840496.1 457788 D 228410 CDS NP_840497.1 30248427 1081346 457979..458233 1 NC_004757.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 458233 rpsQ 1081346 rpsQ Nitrosomonas europaea ATCC 19718 30S ribosomal protein S17 NP_840497.1 457979 D 228410 CDS NP_840498.1 30248428 1081347 458315..458683 1 NC_004757.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 458683 rplN 1081347 rplN Nitrosomonas europaea ATCC 19718 50S ribosomal protein L14 NP_840498.1 458315 D 228410 CDS NP_840499.1 30248429 1081348 458701..459018 1 NC_004757.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 459018 rplX 1081348 rplX Nitrosomonas europaea ATCC 19718 50S ribosomal protein L24 NP_840499.1 458701 D 228410 CDS NP_840500.1 30248430 1081349 459033..459572 1 NC_004757.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 459572 rplE 1081349 rplE Nitrosomonas europaea ATCC 19718 50S ribosomal protein L5 NP_840500.1 459033 D 228410 CDS NP_840501.1 30248431 1081350 459583..459888 1 NC_004757.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 459888 rpsN 1081350 rpsN Nitrosomonas europaea ATCC 19718 30S ribosomal protein S14 NP_840501.1 459583 D 228410 CDS NP_840502.1 30248432 1081351 459961..460356 1 NC_004757.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 460356 rpsH 1081351 rpsH Nitrosomonas europaea ATCC 19718 30S ribosomal protein S8 NP_840502.1 459961 D 228410 CDS NP_840503.1 30248433 1081352 460368..460910 1 NC_004757.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 460910 rplF 1081352 rplF Nitrosomonas europaea ATCC 19718 50S ribosomal protein L6 NP_840503.1 460368 D 228410 CDS NP_840504.1 30248434 1081353 460925..461284 1 NC_004757.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 461284 rplR 1081353 rplR Nitrosomonas europaea ATCC 19718 50S ribosomal protein L18 NP_840504.1 460925 D 228410 CDS NP_840505.1 30248435 1081354 461301..461834 1 NC_004757.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 461834 rpsE 1081354 rpsE Nitrosomonas europaea ATCC 19718 30S ribosomal protein S5 NP_840505.1 461301 D 228410 CDS NP_840506.1 30248436 1081355 461840..462025 1 NC_004757.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 462025 rpmD 1081355 rpmD Nitrosomonas europaea ATCC 19718 50S ribosomal protein L30 NP_840506.1 461840 D 228410 CDS NP_840507.1 30248437 1081356 462027..462488 1 NC_004757.1 50S ribosomal protein L15 462488 1081356 NE0420 Nitrosomonas europaea ATCC 19718 50S ribosomal protein L15 NP_840507.1 462027 D 228410 CDS NP_840508.1 30248438 1081357 462478..463803 1 NC_004757.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 463803 secY 1081357 secY Nitrosomonas europaea ATCC 19718 preprotein translocase subunit SecY NP_840508.1 462478 D 228410 CDS NP_840509.1 30248439 1081358 463811..464029 1 NC_004757.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 464029 infA 1081358 infA Nitrosomonas europaea ATCC 19718 translation initiation factor IF-1 NP_840509.1 463811 D 228410 CDS NP_840510.1 30248440 1081359 464218..464577 1 NC_004757.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 464577 rpsM 1081359 rpsM Nitrosomonas europaea ATCC 19718 30S ribosomal protein S13 NP_840510.1 464218 D 228410 CDS NP_840511.1 30248441 1081360 464618..465007 1 NC_004757.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 465007 rpsK 1081360 rpsK Nitrosomonas europaea ATCC 19718 30S ribosomal protein S11 NP_840511.1 464618 D 228410 CDS NP_840512.1 30248442 1081361 465022..465648 1 NC_004757.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 465648 rpsD 1081361 rpsD Nitrosomonas europaea ATCC 19718 30S ribosomal protein S4 NP_840512.1 465022 D 228410 CDS NP_840513.1 30248443 1081362 465678..466688 1 NC_004757.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 466688 rpoA 1081362 rpoA Nitrosomonas europaea ATCC 19718 DNA-directed RNA polymerase subunit alpha NP_840513.1 465678 D 228410 CDS NP_840514.1 30248444 1081363 466675..467067 1 NC_004757.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 467067 rplQ 1081363 rplQ Nitrosomonas europaea ATCC 19718 50S ribosomal protein L17 NP_840514.1 466675 D 228410 CDS NP_840515.1 30248445 1081365 complement(467402..467713) 1 NC_004757.1 hypothetical protein 467713 1081365 NE0428 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840515.1 467402 R 228410 CDS NP_840516.1 30248446 1081366 complement(467697..468140) 1 NC_004757.1 hypothetical protein 468140 1081366 NE0429 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840516.1 467697 R 228410 CDS NP_840517.1 30248447 1081367 468236..468691 1 NC_004757.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 468691 smpB 1081367 smpB Nitrosomonas europaea ATCC 19718 SsrA-binding protein NP_840517.1 468236 D 228410 CDS NP_840518.1 30248448 1081368 468688..469767 1 NC_004757.1 cytochrome oxidase assembly 469767 1081368 NE0431 Nitrosomonas europaea ATCC 19718 cytochrome oxidase assembly NP_840518.1 468688 D 228410 CDS NP_840519.1 30248449 1081369 469864..470277 1 NC_004757.1 transmembrane protein 470277 1081369 NE0432 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_840519.1 469864 D 228410 CDS NP_840520.1 30248450 1081371 470671..472248 1 NC_004757.1 DNA polymerase III subunits gamma/tau 472248 dnaX 1081371 dnaX Nitrosomonas europaea ATCC 19718 DNA polymerase III subunits gamma/tau NP_840520.1 470671 D 228410 CDS NP_840521.1 30248451 1081372 472265..472588 1 NC_004757.1 hypothetical protein 472588 1081372 NE0434 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840521.1 472265 D 228410 CDS NP_840522.1 30248452 1081373 472644..473522 1 NC_004757.1 pseudouridylate synthase family protein 1 473522 1081373 NE0435 Nitrosomonas europaea ATCC 19718 pseudouridylate synthase family protein 1 NP_840522.1 472644 D 228410 CDS NP_840523.1 30248453 1081374 complement(473497..474435) 1 NC_004757.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 474435 1081374 NE0436 Nitrosomonas europaea ATCC 19718 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase NP_840523.1 473497 R 228410 CDS NP_840524.1 30248454 1081375 474482..474985 1 NC_004757.1 cytidine and deoxycytidylate deaminase zinc-binding region 474985 1081375 NE0437 Nitrosomonas europaea ATCC 19718 cytidine and deoxycytidylate deaminase zinc-binding region NP_840524.1 474482 D 228410 CDS NP_840525.1 30248455 1081376 475400..477142 1 NC_004757.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 477142 1081376 NE0438 Nitrosomonas europaea ATCC 19718 malate dehydrogenase NP_840525.1 475400 D 228410 CDS NP_840526.1 30248456 1081377 complement(477187..478017) 1 NC_004757.1 serB; phosphoserine phosphatase protein 478017 serB 1081377 serB Nitrosomonas europaea ATCC 19718 serB; phosphoserine phosphatase protein NP_840526.1 477187 R 228410 CDS NP_840527.1 30248457 1081378 complement(478104..479579) 1 NC_004757.1 hypothetical protein 479579 1081378 NE0440 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840527.1 478104 R 228410 CDS NP_840528.1 30248458 1081379 479870..481363 1 NC_004757.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 481363 1081379 NE0441 Nitrosomonas europaea ATCC 19718 leucyl aminopeptidase NP_840528.1 479870 D 228410 CDS NP_840529.1 30248459 1081380 481428..481817 1 NC_004757.1 DNA polymerase III subunit chi 481817 holC 1081380 holC Nitrosomonas europaea ATCC 19718 DNA polymerase III subunit chi NP_840529.1 481428 D 228410 CDS NP_840530.1 30248460 1081381 481890..482300 1 NC_004757.1 hypothetical protein 482300 1081381 NE0443 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840530.1 481890 D 228410 CDS NP_840531.1 30248461 1081382 482437..485193 1 NC_004757.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 485193 valS 1081382 valS Nitrosomonas europaea ATCC 19718 valyl-tRNA synthetase NP_840531.1 482437 D 228410 CDS NP_840532.1 30248462 1081383 485267..486334 1 NC_004757.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 486334 hemE 1081383 hemE Nitrosomonas europaea ATCC 19718 uroporphyrinogen decarboxylase NP_840532.1 485267 D 228410 CDS NP_840533.1 30248463 1081384 complement(486487..486972) 1 NC_004757.1 hypothetical protein 486972 1081384 NE0446 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840533.1 486487 R 228410 CDS NP_840534.1 30248464 1081385 complement(487118..487831) 1 NC_004757.1 hypothetical protein 487831 1081385 NE0447 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840534.1 487118 R 228410 CDS NP_840535.1 30248465 1081386 complement(487992..489269) 1 NC_004757.1 ammonium transporter 489269 Rh50 1081386 Rh50 Nitrosomonas europaea ATCC 19718 ammonium transporter NP_840535.1 487992 R 228410 CDS NP_840536.1 30248466 1081387 complement(489941..490756) 1 NC_004757.1 aspartate and glutamate racemase:glutamate racemase 490756 murI 1081387 murI Nitrosomonas europaea ATCC 19718 aspartate and glutamate racemase:glutamate racemase NP_840536.1 489941 R 228410 CDS NP_840537.1 30248467 1081388 complement(490875..491753) 1 NC_004757.1 Phage integrase 491753 int 1081388 int Nitrosomonas europaea ATCC 19718 Phage integrase NP_840537.1 490875 R 228410 CDS NP_840538.1 30248468 1081389 complement(492364..493215) 1 NC_004757.1 integrase catalytic subunit 493215 1081389 NE0451 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840538.1 492364 R 228410 CDS NP_840539.1 30248469 1081390 complement(493269..493592) 1 NC_004757.1 transposase IS911 493592 1081390 NE0452 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_840539.1 493269 R 228410 CDS NP_840540.1 30248470 1081392 494466..495416 1 NC_004757.1 integrase catalytic subunit 495416 1081392 NE0454 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840540.1 494466 D 228410 CDS NP_840541.1 30248471 1081393 complement(496135..496560) 1 NC_004757.1 dksA/traR C4-type zinc finger 496560 1081393 NE0455 Nitrosomonas europaea ATCC 19718 dksA/traR C4-type zinc finger NP_840541.1 496135 R 228410 CDS NP_840542.1 30248472 1081394 496832..497764 1 NC_004757.1 esterase/lipase/thioesterase family protein 497764 1081394 NE0456 Nitrosomonas europaea ATCC 19718 esterase/lipase/thioesterase family protein NP_840542.1 496832 D 228410 CDS NP_840543.1 30248473 1081395 complement(497812..499326) 1 NC_004757.1 hypothetical protein 499326 1081395 NE0457 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840543.1 497812 R 228410 CDS NP_840544.1 30248474 1081396 complement(499467..501563) 1 NC_004757.1 hypothetical protein 501563 Plec1 1081396 Plec1 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840544.1 499467 R 228410 CDS NP_840545.1 30248475 1081397 complement(501725..502522) 1 NC_004757.1 hypothetical protein 502522 fliR 1081397 fliR Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840545.1 501725 R 228410 CDS NP_840546.1 30248476 1081398 complement(502615..502890) 1 NC_004757.1 family 3 exporter FliQ 502890 fliQ 1081398 fliQ Nitrosomonas europaea ATCC 19718 family 3 exporter FliQ NP_840546.1 502615 R 228410 CDS NP_840547.1 30248477 1081399 complement(502906..503712) 1 NC_004757.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 503712 fliP 1081399 fliP Nitrosomonas europaea ATCC 19718 flagellar biosynthesis protein FliP NP_840547.1 502906 R 228410 CDS NP_840548.1 30248478 1081400 complement(503702..504151) 1 NC_004757.1 similar to MOPB PROTEIN pir||S35275 probable flagellar biosynthesis protein mopB - Erwinia carotovora subsp. atroseptica, evalue=1.00e-16, 50% identity; mopB flagellar biosynthesis 504151 1081400 NE0462 Nitrosomonas europaea ATCC 19718 mopB flagellar biosynthesis NP_840548.1 503702 R 228410 CDS NP_840549.1 30248479 1081401 complement(504178..504651) 1 NC_004757.1 flagellar motor switch FliN 504651 fliN 1081401 fliN Nitrosomonas europaea ATCC 19718 flagellar motor switch FliN NP_840549.1 504178 R 228410 CDS NP_840550.1 30248480 1081402 complement(504666..505658) 1 NC_004757.1 flagellar motor switch protein FliM 505658 fliM 1081402 fliM Nitrosomonas europaea ATCC 19718 flagellar motor switch protein FliM NP_840550.1 504666 R 228410 CDS NP_840551.1 30248481 1081403 complement(505671..506159) 1 NC_004757.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 506159 fliL 1081403 fliL Nitrosomonas europaea ATCC 19718 flagellar basal body-associated protein FliL NP_840551.1 505671 R 228410 CDS NP_840552.1 30248482 1081404 complement(506417..508981) 1 NC_004757.1 glycosyl transferase family protein 508981 1081404 NE0466 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_840552.1 506417 R 228410 CDS NP_840553.1 30248483 1081405 509576..510355 1 NC_004757.1 hypothetical protein 510355 1081405 NE0467 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840553.1 509576 D 228410 CDS NP_840554.1 30248484 1081406 510537..511034 1 NC_004757.1 transcriptional activator 511034 rfaH 1081406 rfaH Nitrosomonas europaea ATCC 19718 transcriptional activator NP_840554.1 510537 D 228410 CDS NP_840555.1 30248485 1081407 511368..512426 1 NC_004757.1 NAD-dependent epimerase/dehydratase family protein 512426 rmlB 1081407 rmlB Nitrosomonas europaea ATCC 19718 NAD-dependent epimerase/dehydratase family protein NP_840555.1 511368 D 228410 CDS NP_840556.1 30248486 1081409 512939..513439 1 NC_004757.1 hypothetical protein 513439 1081409 NE0471 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840556.1 512939 D 228410 CDS NP_840557.1 30248487 1081410 513569..514387 1 NC_004757.1 ABC transporter 514387 1081410 NE0472 Nitrosomonas europaea ATCC 19718 ABC transporter NP_840557.1 513569 D 228410 CDS NP_840558.1 30248488 1081411 514553..514918 1 NC_004757.1 hypothetical protein 514918 1081411 NE0473 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840558.1 514553 D 228410 CDS NP_840559.1 30248489 1081412 515103..516257 1 NC_004757.1 hypothetical protein 516257 1081412 NE0474 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840559.1 515103 D 228410 CDS NP_840560.1 30248490 1081413 516404..516625 1 NC_004757.1 CopG family transcriptional regulator 516625 1081413 NE0475 Nitrosomonas europaea ATCC 19718 CopG family transcriptional regulator NP_840560.1 516404 D 228410 CDS NP_840561.1 30248491 1081414 516603..516857 1 NC_004757.1 hypothetical protein 516857 1081414 NE0476 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840561.1 516603 D 228410 CDS NP_840562.1 30248492 1081415 complement(517316..519226) 1 NC_004757.1 ABC transporter ATPase 519226 1081415 NE0477 Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_840562.1 517316 R 228410 CDS NP_840563.1 30248493 1081416 519527..519760 1 NC_004757.1 hypothetical protein 519760 1081416 NE0478 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840563.1 519527 D 228410 CDS NP_840564.1 30248494 1081417 519760..520161 1 NC_004757.1 PilT domain-containing protein 520161 1081417 NE0479 Nitrosomonas europaea ATCC 19718 PilT domain-containing protein NP_840564.1 519760 D 228410 CDS NP_840565.1 30248495 1081418 520320..520748 1 NC_004757.1 hypothetical protein 520748 1081418 NE0480 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840565.1 520320 D 228410 CDS NP_840566.1 30248496 1081419 complement(520813..521118) 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 521118 1081419 NE0481 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_840566.1 520813 R 228410 CDS NP_840567.1 30248497 1081420 complement(521128..521415) 1 NC_004757.1 hypothetical protein 521415 1081420 NE0482 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840567.1 521128 R 228410 CDS NP_840568.1 30248498 1081421 521508..522863 1 NC_004757.1 polysaccharide ABC transporter ATPase 522863 wzt 1081421 wzt Nitrosomonas europaea ATCC 19718 polysaccharide ABC transporter ATPase NP_840568.1 521508 D 228410 CDS NP_840569.1 30248499 1081422 522860..526066 1 NC_004757.1 hypothetical protein 526066 1081422 NE0484 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840569.1 522860 D 228410 CDS NP_840570.1 30248500 1081423 526108..527445 1 NC_004757.1 hypothetical protein 527445 1081423 NE0485 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840570.1 526108 D 228410 CDS NP_840571.1 30248501 1081424 527442..528536 1 NC_004757.1 UDP-N-acetylglucosamine 2-epimerase 528536 rffE 1081424 rffE Nitrosomonas europaea ATCC 19718 UDP-N-acetylglucosamine 2-epimerase NP_840571.1 527442 D 228410 CDS NP_840572.1 30248502 1081425 528536..529639 1 NC_004757.1 glycosyltransferase 529639 1081425 NE0487 Nitrosomonas europaea ATCC 19718 glycosyltransferase NP_840572.1 528536 D 228410 CDS NP_840573.1 30248503 1081426 complement(529744..529986) 1 NC_004757.1 hypothetical protein 529986 1081426 NE0488 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840573.1 529744 R 228410 CDS NP_840574.1 30248504 1081427 complement(529967..531649) 1 NC_004757.1 abortive infection phage resistance protein 531649 abiR 1081427 abiR Nitrosomonas europaea ATCC 19718 abortive infection phage resistance protein NP_840574.1 529967 R 228410 CDS NP_840575.1 30248505 1081428 complement(531968..532285) 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 532285 1081428 NE0490 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_840575.1 531968 R 228410 CDS NP_840576.1 30248506 1081429 complement(532298..532621) 1 NC_004757.1 hypothetical protein 532621 1081429 NE0491 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840576.1 532298 R 228410 CDS NP_840577.1 30248507 1081430 complement(532909..533976) 1 NC_004757.1 transposase 533976 1081430 NE0492 Nitrosomonas europaea ATCC 19718 transposase NP_840577.1 532909 R 228410 CDS NP_840578.1 30248508 1081431 complement(533980..534297) 1 NC_004757.1 hypothetical protein 534297 1081431 NE0493 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840578.1 533980 R 228410 CDS NP_840579.1 30248509 1081432 complement(534294..534614) 1 NC_004757.1 hypothetical protein 534614 1081432 NE0494 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840579.1 534294 R 228410 CDS NP_840580.1 30248510 1081433 complement(534868..535176) 1 NC_004757.1 hypothetical protein 535176 1081433 NE0495 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840580.1 534868 R 228410 CDS NP_840581.1 30248511 1081434 535662..535853 1 NC_004757.1 hypothetical protein 535853 1081434 NE0496 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840581.1 535662 D 228410 CDS NP_840582.1 30248512 1081435 536217..536480 1 NC_004757.1 NtrP protein 536480 1081435 NE0497 Nitrosomonas europaea ATCC 19718 NtrP protein NP_840582.1 536217 D 228410 CDS NP_840583.1 30248513 1081436 536477..536887 1 NC_004757.1 PilT domain-containing protein 536887 ntrR2 1081436 ntrR2 Nitrosomonas europaea ATCC 19718 PilT domain-containing protein NP_840583.1 536477 D 228410 CDS NP_840584.1 30248514 1081437 536923..537672 1 NC_004757.1 glycosyl transferase family protein 537672 1081437 NE0499 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_840584.1 536923 D 228410 CDS NP_840585.1 30248515 1081438 537687..538634 1 NC_004757.1 UDP-glucose 4-epimerase 538634 1081438 NE0500 Nitrosomonas europaea ATCC 19718 UDP-glucose 4-epimerase NP_840585.1 537687 D 228410 CDS NP_840586.1 30248516 1081439 538645..539253 1 NC_004757.1 sugar transferase 539253 1081439 NE0501 Nitrosomonas europaea ATCC 19718 sugar transferase NP_840586.1 538645 D 228410 CDS NP_840587.1 30248517 1081440 539262..541229 1 NC_004757.1 polysaccharide biosynthesis protein CapD type 541229 wbpM 1081440 wbpM Nitrosomonas europaea ATCC 19718 polysaccharide biosynthesis protein CapD type NP_840587.1 539262 D 228410 CDS NP_840588.1 30248518 1081441 complement(541277..541774) 1 NC_004757.1 hypothetical protein 541774 1081441 NE0503 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840588.1 541277 R 228410 CDS NP_840589.1 30248519 1081442 complement(541930..543336) 1 NC_004757.1 glutamine synthetase 543336 glnA1 1081442 glnA1 Nitrosomonas europaea ATCC 19718 glutamine synthetase NP_840589.1 541930 R 228410 CDS NP_840590.1 30248520 1081443 complement(543547..544581) 1 NC_004757.1 rluD; ribosomal large subunit pseudouridine synthase D 544581 rluD 1081443 rluD Nitrosomonas europaea ATCC 19718 rluD; ribosomal large subunit pseudouridine synthase D NP_840590.1 543547 R 228410 CDS NP_840591.1 30248521 1081444 544616..545383 1 NC_004757.1 hypothetical protein 545383 1081444 NE0506 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840591.1 544616 D 228410 CDS NP_840592.1 30248522 1081446 545683..546567 1 NC_004757.1 Required for efficient pilin antigenic variation; recombination associated protein 546567 rdgC 1081446 rdgC Nitrosomonas europaea ATCC 19718 recombination associated protein NP_840592.1 545683 D 228410 CDS NP_840593.1 30248523 1081447 complement(546679..547308) 1 NC_004757.1 hypothetical protein 547308 1081447 NE0508 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840593.1 546679 R 228410 CDS NP_840594.1 30248524 1081448 complement(547305..547925) 1 NC_004757.1 SCO1/SenC 547925 SCO1 1081448 SCO1 Nitrosomonas europaea ATCC 19718 SCO1/SenC NP_840594.1 547305 R 228410 CDS NP_840595.1 30248525 1081449 complement(548033..549394) 1 NC_004757.1 hypothetical protein 549394 1081449 NE0510 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840595.1 548033 R 228410 CDS NP_840596.1 30248526 1081450 549794..550039 1 NC_004757.1 hypothetical protein 550039 1081450 NE0511 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840596.1 549794 D 228410 CDS NP_840597.1 30248527 1081451 complement(550108..550467) 1 NC_004757.1 hypothetical protein 550467 1081451 NE0512 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840597.1 550108 R 228410 CDS NP_840598.1 30248528 1081452 550787..552349 1 NC_004757.1 amino acid transporter 552349 1081452 NE0513 Nitrosomonas europaea ATCC 19718 amino acid transporter NP_840598.1 550787 D 228410 CDS NP_840599.1 30248529 1081453 complement(552429..553118) 1 NC_004757.1 response regulator baeR 553118 1081453 NE0514 Nitrosomonas europaea ATCC 19718 response regulator baeR NP_840599.1 552429 R 228410 CDS NP_840600.1 30248530 1081454 complement(553115..554551) 1 NC_004757.1 sensory transduction histidine kinase 554551 baeS 1081454 baeS Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_840600.1 553115 R 228410 CDS NP_840601.1 30248531 1081455 554896..555660 1 NC_004757.1 hypothetical protein 555660 1081455 NE0516 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840601.1 554896 D 228410 CDS NP_840602.1 30248532 1081456 complement(555685..556635) 1 NC_004757.1 integrase catalytic subunit 556635 1081456 NE0517 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840602.1 555685 R 228410 CDS NP_840603.1 30248533 1081457 556781..557149 1 NC_004757.1 transposase 557149 1081457 NE0518 Nitrosomonas europaea ATCC 19718 transposase NP_840603.1 556781 D 228410 CDS NP_840604.1 30248534 1081458 556954..557529 1 NC_004757.1 IS4 family transposase 557529 1081458 NE0519 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_840604.1 556954 D 228410 CDS NP_840605.1 30248535 1081459 complement(557637..558425) 1 NC_004757.1 hypothetical protein 558425 1081459 NE0520 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840605.1 557637 R 228410 CDS NP_840606.1 30248536 1081460 558897..559901 1 NC_004757.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 559901 cbbF 1081460 cbbF Nitrosomonas europaea ATCC 19718 fructose-1,6-bisphosphatase NP_840606.1 558897 D 228410 CDS NP_840607.1 30248537 1081461 complement(559927..560907) 1 NC_004757.1 glutathione S-transferase 560907 1081461 NE0522 Nitrosomonas europaea ATCC 19718 glutathione S-transferase NP_840607.1 559927 R 228410 CDS NP_840608.1 30248538 1081462 complement(560895..561188) 1 NC_004757.1 hypothetical protein 561188 1081462 NE0523 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840608.1 560895 R 228410 CDS NP_840609.1 30248539 1081463 complement(561818..562201) 1 NC_004757.1 hypothetical protein 562201 1081463 NE0524 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840609.1 561818 R 228410 CDS NP_840610.1 30248540 1081464 complement(562198..562608) 1 NC_004757.1 hypothetical protein 562608 1081464 NE0525 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840610.1 562198 R 228410 CDS NP_840611.1 30248541 1081465 complement(562796..563176) 1 NC_004757.1 hypothetical protein 563176 1081465 NE0526 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840611.1 562796 R 228410 CDS NP_840612.1 30248542 1081466 563220..563840 1 NC_004757.1 FtsJ cell division protein 563840 1081466 NE0527 Nitrosomonas europaea ATCC 19718 FtsJ cell division protein NP_840612.1 563220 D 228410 CDS NP_840613.1 30248543 1081467 563925..565856 1 NC_004757.1 hflB; ATP-dependent zinc metallopeptidase (cell division ftsh) transmembrane protein 565856 hflB 1081467 hflB Nitrosomonas europaea ATCC 19718 hflB; ATP-dependent zinc metallopeptidase (cell division ftsh) transmembrane protein NP_840613.1 563925 D 228410 CDS NP_840614.1 30248544 1081468 565925..566767 1 NC_004757.1 dihydropteroate synthase 566767 folP 1081468 folP Nitrosomonas europaea ATCC 19718 dihydropteroate synthase NP_840614.1 565925 D 228410 CDS NP_840615.1 30248545 1081469 566948..568324 1 NC_004757.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 568324 glmM 1081469 glmM Nitrosomonas europaea ATCC 19718 phosphoglucosamine mutase NP_840615.1 566948 D 228410 CDS NP_840616.1 30248546 1081470 568448..569461 1 NC_004757.1 phosphate-binding protein 569461 1081470 NE0531 Nitrosomonas europaea ATCC 19718 phosphate-binding protein NP_840616.1 568448 D 228410 CDS NP_840617.1 30248547 1081471 569551..571056 1 NC_004757.1 uroporphyrinogen-III methylase CysG 571056 cysG 1081471 cysG Nitrosomonas europaea ATCC 19718 uroporphyrinogen-III methylase CysG NP_840617.1 569551 D 228410 CDS NP_840618.1 30248548 1081472 571180..571770 1 NC_004757.1 RNA polymerase ECF-subfamily sigma-70 factor 571770 1081472 NE0533 Nitrosomonas europaea ATCC 19718 RNA polymerase ECF-subfamily sigma-70 factor NP_840618.1 571180 D 228410 CDS NP_840619.1 30248549 1081473 571758..572684 1 NC_004757.1 transmembrane sensor 572684 1081473 NE0534 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_840619.1 571758 D 228410 CDS NP_840620.1 30248550 1081474 572982..575528 1 NC_004757.1 TonB-dependent receptor protein 575528 1081474 NE0535 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840620.1 572982 D 228410 CDS NP_840621.1 30248551 1081475 575621..576838 1 NC_004757.1 BNR repeat-containing protein 576838 1081475 NE0536 Nitrosomonas europaea ATCC 19718 BNR repeat-containing protein NP_840621.1 575621 D 228410 CDS NP_840622.1 30248552 1081476 577321..578589 1 NC_004757.1 hypothetical protein 578589 1081476 NE0537 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840622.1 577321 D 228410 CDS NP_840623.1 30248553 1081477 578605..580020 1 NC_004757.1 Outer membrane efflux protein 580020 1081477 NE0538 Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_840623.1 578605 D 228410 CDS NP_840624.1 30248554 1081478 580264..581457 1 NC_004757.1 hemolysin D 581457 yegM 1081478 yegM Nitrosomonas europaea ATCC 19718 hemolysin D NP_840624.1 580264 D 228410 CDS NP_840625.1 30248555 1081479 581454..584576 1 NC_004757.1 acriflavin resistance protein 584576 1081479 NE0540 Nitrosomonas europaea ATCC 19718 acriflavin resistance protein NP_840625.1 581454 D 228410 CDS NP_840626.1 30248556 1081480 584746..585246 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 585246 1081480 NE0541 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_840626.1 584746 D 228410 CDS NP_840627.1 30248557 1081481 585315..586298 1 NC_004757.1 transmembrane sensor 586298 1081481 NE0542 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_840627.1 585315 D 228410 CDS NP_840628.1 30248558 1081482 complement(586410..587033) 1 NC_004757.1 hypothetical protein 587033 1081482 NE0543 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840628.1 586410 R 228410 CDS NP_840629.1 30248559 1081483 complement(587054..587809) 1 NC_004757.1 similar to (L31491) ORF1; [Plasmid pTOM9], evalue=4.00e-71, 60% identity; hypothetical protein 587809 1081483 NE0544 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840629.1 587054 R 228410 CDS NP_840630.1 30248560 1081484 complement(588021..588530) 1 NC_004757.1 hypothetical protein 588530 1081484 NE0545 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840630.1 588021 R 228410 CDS NP_840631.1 30248561 1081485 589287..591650 1 NC_004757.1 TonB-dependent receptor protein 591650 1081485 NE0546 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840631.1 589287 D 228410 CDS NP_840632.1 30248562 1081486 591808..592407 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 592407 1081486 NE0547 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_840632.1 591808 D 228410 CDS NP_840633.1 30248563 1081487 592474..593424 1 NC_004757.1 transmembrane sensor 593424 1081487 NE0548 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_840633.1 592474 D 228410 CDS NP_840634.1 30248564 1081488 593567..595915 1 NC_004757.1 TonB-dependent receptor protein 595915 1081488 NE0549 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840634.1 593567 D 228410 CDS NP_840635.1 30248565 1081489 595918..597150 1 NC_004757.1 hypothetical protein 597150 1081489 NE0550 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840635.1 595918 D 228410 CDS NP_840636.1 30248566 1081490 597544..597831 1 NC_004757.1 similar to (NC_002122) yacA [Plasmid ColIb-P9], evalue=3.00e-11, 41% identity; hypothetical protein 597831 1081490 NE0551 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840636.1 597544 D 228410 CDS NP_840637.1 30248567 1081491 597828..598118 1 NC_004757.1 hypothetical protein 598118 1081491 NE0552 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840637.1 597828 D 228410 CDS NP_840638.1 30248568 1081492 complement(598173..598589) 1 NC_004757.1 PilT domain-containing protein 598589 1081492 NE0553 Nitrosomonas europaea ATCC 19718 PilT domain-containing protein NP_840638.1 598173 R 228410 CDS NP_840639.1 30248569 1081493 598775..599368 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 599368 1081493 NE0554 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_840639.1 598775 D 228410 CDS NP_840640.1 30248570 1081494 599368..600297 1 NC_004757.1 transmembrane sensor 600297 1081494 NE0555 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_840640.1 599368 D 228410 CDS NP_840641.1 30248571 1081495 600514..602859 1 NC_004757.1 TonB-dependent receptor protein 602859 1081495 NE0556 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840641.1 600514 D 228410 CDS NP_840642.1 30248572 1081496 602989..603648 1 NC_004757.1 ECF subfamily RNA polymerase sigma-70 factor 603648 1081496 NE0557 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma-70 factor NP_840642.1 602989 D 228410 CDS NP_840643.1 30248573 1081497 603748..604779 1 NC_004757.1 transcriptional regulator 604779 1081497 NE0558 Nitrosomonas europaea ATCC 19718 transcriptional regulator NP_840643.1 603748 D 228410 CDS NP_840644.1 30248574 1081498 604928..607327 1 NC_004757.1 TonB-dependent receptor protein 607327 1081498 NE0559 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840644.1 604928 D 228410 CDS NP_840645.1 30248575 1081499 607648..608016 1 NC_004757.1 transposase 608016 1081499 NE0560 Nitrosomonas europaea ATCC 19718 transposase NP_840645.1 607648 D 228410 CDS NP_840646.1 30248576 1081500 607821..608396 1 NC_004757.1 IS4 family transposase 608396 1081500 NE0561 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_840646.1 607821 D 228410 CDS NP_840647.1 30248577 1081501 608474..609424 1 NC_004757.1 integrase catalytic subunit 609424 1081501 NE0562 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840647.1 608474 D 228410 CDS NP_840648.1 30248578 1081503 complement(610663..613401) 1 NC_004757.1 multicopper oxidase type 1 613401 1081503 NE0564 Nitrosomonas europaea ATCC 19718 multicopper oxidase type 1 NP_840648.1 610663 R 228410 CDS NP_840649.1 30248579 1081504 complement(613443..614462) 1 NC_004757.1 hypothetical protein 614462 1081504 NE0565 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840649.1 613443 R 228410 CDS NP_840650.1 30248580 1081505 615224..616471 1 NC_004757.1 hypothetical protein 616471 1081505 NE0566 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840650.1 615224 D 228410 CDS NP_840651.1 30248581 1081506 complement(616514..617062) 1 NC_004757.1 dihydrofolate reductase 617062 dfrA 1081506 dfrA Nitrosomonas europaea ATCC 19718 dihydrofolate reductase NP_840651.1 616514 R 228410 CDS NP_840652.1 30248582 1081507 complement(617059..617853) 1 NC_004757.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 617853 thyA 1081507 thyA Nitrosomonas europaea ATCC 19718 thymidylate synthase NP_840652.1 617059 R 228410 CDS NP_840653.1 30248583 1081508 617952..619454 1 NC_004757.1 cytosol aminopeptidase 619454 1081508 NE0569 Nitrosomonas europaea ATCC 19718 cytosol aminopeptidase NP_840653.1 617952 D 228410 CDS NP_840654.1 30248584 1081509 619505..619855 1 NC_004757.1 lipase 619855 1081509 NE0570 Nitrosomonas europaea ATCC 19718 lipase NP_840654.1 619505 D 228410 CDS NP_840655.1 30248585 1081510 complement(619977..620738) 1 NC_004757.1 hypothetical protein 620738 1081510 NE0571 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840655.1 619977 R 228410 CDS NP_840656.1 30248586 1081511 complement(621048..621965) 1 NC_004757.1 transcriptional regulator CysB-like protein 621965 cbl 1081511 cbl Nitrosomonas europaea ATCC 19718 transcriptional regulator CysB-like protein NP_840656.1 621048 R 228410 CDS NP_840657.1 30248587 1081512 complement(622060..623685) 1 NC_004757.1 aminotransferase class-V 623685 1081512 NE0573 Nitrosomonas europaea ATCC 19718 aminotransferase class-V NP_840657.1 622060 R 228410 CDS NP_840658.1 30248588 1081513 complement(623672..624589) 1 NC_004757.1 major membrane protein I 624589 1081513 NE0574 Nitrosomonas europaea ATCC 19718 major membrane protein I NP_840658.1 623672 R 228410 CDS NP_840659.1 30248589 1081514 complement(624698..625636) 1 NC_004757.1 hexapeptide repeat-containing transferase 625636 1081514 NE0575 Nitrosomonas europaea ATCC 19718 hexapeptide repeat-containing transferase NP_840659.1 624698 R 228410 CDS NP_840660.1 30248590 1081515 complement(625636..626724) 1 NC_004757.1 sulfate transport ATP-binding ABC transporter protein CysA 626724 cysA 1081515 cysA Nitrosomonas europaea ATCC 19718 sulfate transport ATP-binding ABC transporter protein CysA NP_840660.1 625636 R 228410 CDS NP_840661.1 30248591 1081516 complement(626721..627599) 1 NC_004757.1 sulfate transport ABC transporter protein CysW 627599 cysW 1081516 cysW Nitrosomonas europaea ATCC 19718 sulfate transport ABC transporter protein CysW NP_840661.1 626721 R 228410 CDS NP_840662.1 30248592 1081517 complement(627609..628442) 1 NC_004757.1 sulfate transport ABC transporter protein CysU 628442 cysU 1081517 cysU Nitrosomonas europaea ATCC 19718 sulfate transport ABC transporter protein CysU NP_840662.1 627609 R 228410 CDS NP_840663.1 30248593 1081518 complement(628508..629296) 1 NC_004757.1 hypothetical protein 629296 1081518 NE0579 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840663.1 628508 R 228410 CDS NP_840664.1 30248594 1081519 complement(629387..630256) 1 NC_004757.1 hypothetical protein 630256 1081519 NE0580 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840664.1 629387 R 228410 CDS NP_840665.1 30248595 1081520 complement(630410..630715) 1 NC_004757.1 diverged CheY-domain-containing protein 630715 1081520 NE0581 Nitrosomonas europaea ATCC 19718 diverged CheY-domain-containing protein NP_840665.1 630410 R 228410 CDS NP_840666.1 30248596 1081521 complement(630774..631781) 1 NC_004757.1 sulfate-/thiosulfate-binding protein 631781 sbp1 1081521 sbp1 Nitrosomonas europaea ATCC 19718 sulfate-/thiosulfate-binding protein NP_840666.1 630774 R 228410 CDS NP_840667.1 30248597 1081522 complement(631810..633384) 1 NC_004757.1 hypothetical protein 633384 1081522 NE0583 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840667.1 631810 R 228410 CDS NP_840668.1 30248598 1081523 633671..634513 1 NC_004757.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 634513 rpoH 1081523 rpoH Nitrosomonas europaea ATCC 19718 RNA polymerase factor sigma-32 NP_840668.1 633671 D 228410 CDS NP_840669.1 30248599 1081524 complement(634570..635280) 1 NC_004757.1 hypothetical protein 635280 1081524 NE0585 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840669.1 634570 R 228410 CDS NP_840670.1 30248600 1081525 635552..636943 1 NC_004757.1 hypothetical protein 636943 1081525 NE0586 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840670.1 635552 D 228410 CDS NP_840671.1 30248601 1081526 636946..638379 1 NC_004757.1 hypothetical protein 638379 1081526 NE0587 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840671.1 636946 D 228410 CDS NP_840672.1 30248602 1081527 complement(638399..640384) 1 NC_004757.1 Phage integrase:chain length determinant protein 640384 1081527 NE0588 Nitrosomonas europaea ATCC 19718 Phage integrase:chain length determinant protein NP_840672.1 638399 R 228410 CDS NP_840673.1 30248603 1081528 complement(640638..643439) 1 NC_004757.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 643439 ppc 1081528 ppc Nitrosomonas europaea ATCC 19718 phosphoenolpyruvate carboxylase NP_840673.1 640638 R 228410 CDS NP_840674.1 30248604 1081529 643563..644489 1 NC_004757.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 644489 hemC 1081529 hemC Nitrosomonas europaea ATCC 19718 porphobilinogen deaminase NP_840674.1 643563 D 228410 CDS NP_840675.1 30248605 1081530 644520..645299 1 NC_004757.1 uroporphyrinogen III synthase HEM4 645299 hemD 1081530 hemD Nitrosomonas europaea ATCC 19718 uroporphyrinogen III synthase HEM4 NP_840675.1 644520 D 228410 CDS NP_840676.1 30248606 1081531 645323..646330 1 NC_004757.1 uroporphyrin-III C-methyltransferase 646330 1081531 NE0592 Nitrosomonas europaea ATCC 19718 uroporphyrin-III C-methyltransferase NP_840676.1 645323 D 228410 CDS NP_840677.1 30248607 1081532 646353..647522 1 NC_004757.1 protein porphyrin biosynthesis 647522 hemY 1081532 hemY Nitrosomonas europaea ATCC 19718 protein porphyrin biosynthesis NP_840677.1 646353 D 228410 CDS NP_840678.1 30248608 1081533 complement(647527..648573) 1 NC_004757.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 648573 1081533 NE0594 Nitrosomonas europaea ATCC 19718 CDP-6-deoxy-delta-3,4-glucoseen reductase NP_840678.1 647527 R 228410 CDS NP_840679.1 30248609 1081534 648603..649514 1 NC_004757.1 oxidoreductase protein 649514 1081534 NE0595 Nitrosomonas europaea ATCC 19718 oxidoreductase protein NP_840679.1 648603 D 228410 CDS NP_840680.1 30248610 1081535 649568..650788 1 NC_004757.1 type II secretion system protein 650788 pilC 1081535 pilC Nitrosomonas europaea ATCC 19718 type II secretion system protein NP_840680.1 649568 D 228410 CDS NP_840681.1 30248611 1081536 650836..651696 1 NC_004757.1 prepilin cysteine protease (C20), type IV 651696 pilD 1081536 pilD Nitrosomonas europaea ATCC 19718 prepilin cysteine protease (C20), type IV NP_840681.1 650836 D 228410 CDS NP_840682.1 30248612 1081537 651699..652310 1 NC_004757.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 652310 coaE 1081537 coaE Nitrosomonas europaea ATCC 19718 dephospho-CoA kinase NP_840682.1 651699 D 228410 CDS NP_840683.1 30248613 1081538 652351..653139 1 NC_004757.1 hypothetical protein 653139 1081538 NE0599 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840683.1 652351 D 228410 CDS NP_840684.1 30248614 1081539 complement(653465..654706) 1 NC_004757.1 lysophospholipid transporter LplT 654706 1081539 NE0600 Nitrosomonas europaea ATCC 19718 lysophospholipid transporter LplT NP_840684.1 653465 R 228410 CDS NP_840685.1 30248615 1081540 654957..656387 1 NC_004757.1 Na+/H+ antiporter NhaC 656387 1081540 NE0601 Nitrosomonas europaea ATCC 19718 Na+/H+ antiporter NhaC NP_840685.1 654957 D 228410 CDS NP_840686.1 30248616 1081541 656392..656856 1 NC_004757.1 hypothetical protein 656856 1081541 NE0602 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840686.1 656392 D 228410 CDS NP_840687.1 30248617 1081542 656861..657532 1 NC_004757.1 transmembrane protein 657532 1081542 NE0603 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_840687.1 656861 D 228410 CDS NP_840688.1 30248618 1081543 657708..658502 1 NC_004757.1 ubiquinone/menaquinone biosynthesis methlytransferase UbiE 658502 1081543 NE0604 Nitrosomonas europaea ATCC 19718 ubiquinone/menaquinone biosynthesis methlytransferase UbiE NP_840688.1 657708 D 228410 CDS NP_840689.1 30248619 1081544 658709..658954 1 NC_004757.1 hypothetical protein 658954 1081544 NE0605 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840689.1 658709 D 228410 CDS NP_840690.1 30248620 1081545 658986..659783 1 NC_004757.1 carbonic anhydrase 659783 cah 1081545 cah Nitrosomonas europaea ATCC 19718 carbonic anhydrase NP_840690.1 658986 D 228410 CDS NP_840691.1 30248621 1081546 660304..661395 1 NC_004757.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 661395 gcvT 1081546 gcvT Nitrosomonas europaea ATCC 19718 glycine cleavage system aminomethyltransferase T NP_840691.1 660304 D 228410 CDS NP_840692.1 30248622 1081547 661468..661857 1 NC_004757.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 661857 gcvH1 1081547 gcvH1 Nitrosomonas europaea ATCC 19718 glycine cleavage system protein H NP_840692.1 661468 D 228410 CDS NP_840693.1 30248623 1081548 661926..663287 1 NC_004757.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 663287 1081548 NE0609 Nitrosomonas europaea ATCC 19718 glycine dehydrogenase subunit 1 NP_840693.1 661926 D 228410 CDS NP_840694.1 30248624 1081549 663357..664808 1 NC_004757.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 664808 1081549 NE0610 Nitrosomonas europaea ATCC 19718 glycine dehydrogenase subunit 2 NP_840694.1 663357 D 228410 CDS NP_840695.1 30248625 1081550 664810..665745 1 NC_004757.1 PfkB family of carbohydrate kinase 665745 1081550 NE0611 Nitrosomonas europaea ATCC 19718 PfkB family of carbohydrate kinase NP_840695.1 664810 D 228410 CDS NP_840696.1 30248626 1081551 665885..666688 1 NC_004757.1 phospholipid/glycerol acyltransferase 666688 plsC 1081551 plsC Nitrosomonas europaea ATCC 19718 phospholipid/glycerol acyltransferase NP_840696.1 665885 D 228410 CDS NP_840697.1 30248627 1081552 complement(666630..667436) 1 NC_004757.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 667436 apaH 1081552 apaH Nitrosomonas europaea ATCC 19718 diadenosine tetraphosphatase NP_840697.1 666630 R 228410 CDS NP_840698.1 30248628 1081553 complement(667443..668249) 1 NC_004757.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 668249 1081553 NE0614 Nitrosomonas europaea ATCC 19718 dihydrodipicolinate reductase NP_840698.1 667443 R 228410 CDS NP_840699.1 30248629 1081554 complement(668246..668740) 1 NC_004757.1 outer membrane lipoprotein OmlA 668740 omlA 1081554 omlA Nitrosomonas europaea ATCC 19718 outer membrane lipoprotein OmlA NP_840699.1 668246 R 228410 CDS NP_840700.1 30248630 1081555 668953..669393 1 NC_004757.1 hypothetical protein 669393 fur1 1081555 fur1 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840700.1 668953 D 228410 CDS NP_840701.1 30248631 1081556 669849..672059 1 NC_004757.1 TonB-dependent receptor protein 672059 oprC 1081556 oprC Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840701.1 669849 D 228410 CDS NP_840702.1 30248632 1081557 complement(672090..674828) 1 NC_004757.1 mono valent cation-transporting P-type ATPase 674828 1081557 NE0618 Nitrosomonas europaea ATCC 19718 mono valent cation-transporting P-type ATPase NP_840702.1 672090 R 228410 CDS NP_840703.1 30248633 1081558 675094..675876 1 NC_004757.1 hypothetical protein 675876 1081558 NE0619 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840703.1 675094 D 228410 CDS NP_840704.1 30248634 1081559 complement(675883..677067) 1 NC_004757.1 Iron-containing alcohol dehydrogenase 677067 1081559 NE0620 Nitrosomonas europaea ATCC 19718 Iron-containing alcohol dehydrogenase NP_840704.1 675883 R 228410 CDS NP_840705.1 30248635 1081560 complement(677067..677369) 1 NC_004757.1 hypothetical protein 677369 1081560 NE0621 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840705.1 677067 R 228410 CDS NP_840706.1 30248636 1081561 677593..677928 1 NC_004757.1 hypothetical protein 677928 1081561 NE0622 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840706.1 677593 D 228410 CDS NP_840707.1 30248637 1081562 complement(678034..678600) 1 NC_004757.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 678600 dcd 1081562 dcd Nitrosomonas europaea ATCC 19718 deoxycytidine triphosphate deaminase NP_840707.1 678034 R 228410 CDS NP_840708.1 30248638 1081563 complement(678610..679695) 1 NC_004757.1 hypothetical protein 679695 mrp 1081563 mrp Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840708.1 678610 R 228410 CDS NP_840709.1 30248639 1081564 679795..681915 1 NC_004757.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 681915 metG 1081564 metG Nitrosomonas europaea ATCC 19718 methionyl-tRNA synthetase NP_840709.1 679795 D 228410 CDS NP_840710.1 30248640 1081565 682037..684682 1 NC_004757.1 aminopeptidase N 684682 pepN 1081565 pepN Nitrosomonas europaea ATCC 19718 aminopeptidase N NP_840710.1 682037 D 228410 CDS NP_840711.1 30248641 1081566 685326..687548 1 NC_004757.1 TonB-dependent receptor protein 687548 1081566 NE0627 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840711.1 685326 D 228410 CDS NP_840712.1 30248642 1081570 691946..692488 1 NC_004757.1 hypothetical protein 692488 1081570 NE0631 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840712.1 691946 D 228410 CDS NP_840713.1 30248643 1081571 692481..692837 1 NC_004757.1 hypothetical protein 692837 1081571 NE0632 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840713.1 692481 D 228410 CDS NP_840714.1 30248644 1081572 complement(692877..693215) 1 NC_004757.1 hypothetical protein 693215 1081572 NE0633 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840714.1 692877 R 228410 CDS NP_840715.1 30248645 1081573 complement(693412..694038) 1 NC_004757.1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 694038 cobO 1081573 cobO Nitrosomonas europaea ATCC 19718 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NP_840715.1 693412 R 228410 CDS NP_840716.1 30248646 1081574 complement(694025..694606) 1 NC_004757.1 hypothetical protein 694606 1081574 NE0635 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840716.1 694025 R 228410 CDS NP_840717.1 30248647 1081575 complement(694616..696454) 1 NC_004757.1 TonB-dependent receptor protein 696454 1081575 NE0636 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840717.1 694616 R 228410 CDS NP_840718.1 30248648 1081576 complement(696935..697711) 1 NC_004757.1 hypothetical protein 697711 tatC 1081576 tatC Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840718.1 696935 R 228410 CDS NP_840719.1 30248649 1081577 complement(697808..698203) 1 NC_004757.1 mttA/Hcf106 family protein 698203 1081577 NE0638 Nitrosomonas europaea ATCC 19718 mttA/Hcf106 family protein NP_840719.1 697808 R 228410 CDS NP_840720.1 30248650 1081578 complement(698288..698518) 1 NC_004757.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 698518 tatA 1081578 tatA Nitrosomonas europaea ATCC 19718 twin arginine translocase protein A NP_840720.1 698288 R 228410 CDS NP_840721.1 30248651 1081579 complement(698537..698887) 1 NC_004757.1 HIT (histidine triad) family protein 698887 hitA 1081579 hitA Nitrosomonas europaea ATCC 19718 HIT (histidine triad) family protein NP_840721.1 698537 R 228410 CDS NP_840722.1 30248652 1081580 complement(698889..699227) 1 NC_004757.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 699227 hisE 1081580 hisE Nitrosomonas europaea ATCC 19718 phosphoribosyl-ATP pyrophosphatase NP_840722.1 698889 R 228410 CDS NP_840723.1 30248653 1081581 complement(699224..699613) 1 NC_004757.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 699613 hisI 1081581 hisI Nitrosomonas europaea ATCC 19718 phosphoribosyl-AMP cyclohydrolase NP_840723.1 699224 R 228410 CDS NP_840724.1 30248654 1081582 complement(699770..700546) 1 NC_004757.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 700546 hisF 1081582 hisF Nitrosomonas europaea ATCC 19718 imidazole glycerol phosphate synthase subunit HisF NP_840724.1 699770 R 228410 CDS NP_840725.1 30248655 1081583 complement(700646..701395) 1 NC_004757.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 701395 hisA 1081583 hisA Nitrosomonas europaea ATCC 19718 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase NP_840725.1 700646 R 228410 CDS NP_840726.1 30248656 1081584 complement(701464..702102) 1 NC_004757.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 702102 hisH 1081584 hisH Nitrosomonas europaea ATCC 19718 imidazole glycerol phosphate synthase subunit HisH NP_840726.1 701464 R 228410 CDS NP_840727.1 30248657 1081585 complement(702133..702726) 1 NC_004757.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 702726 hisB 1081585 hisB Nitrosomonas europaea ATCC 19718 imidazoleglycerol-phosphate dehydratase NP_840727.1 702133 R 228410 CDS NP_840728.1 30248658 1081586 complement(702762..703841) 1 NC_004757.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 703841 hisC1 1081586 hisC1 Nitrosomonas europaea ATCC 19718 histidinol-phosphate aminotransferase NP_840728.1 702762 R 228410 CDS NP_840729.1 30248659 1081587 complement(703881..704174) 1 NC_004757.1 hypothetical protein 704174 1081587 NE0648 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840729.1 703881 R 228410 CDS NP_840730.1 30248660 1081588 704465..705436 1 NC_004757.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 705436 ispH 1081588 ispH Nitrosomonas europaea ATCC 19718 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NP_840730.1 704465 D 228410 CDS NP_840731.1 30248661 1081589 complement(705439..706545) 1 NC_004757.1 NAD binding site:D-amino acid oxidase 706545 1081589 NE0650 Nitrosomonas europaea ATCC 19718 NAD binding site:D-amino acid oxidase NP_840731.1 705439 R 228410 CDS NP_840732.1 30248662 1081590 706708..707151 1 NC_004757.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 707151 aroQ1 1081590 aroQ1 Nitrosomonas europaea ATCC 19718 3-dehydroquinate dehydratase NP_840732.1 706708 D 228410 CDS NP_840733.1 30248663 1081591 707352..707810 1 NC_004757.1 acetyl-CoA carboxylase biotin carboxyl carrier subunit 707810 accB1 1081591 accB1 Nitrosomonas europaea ATCC 19718 acetyl-CoA carboxylase biotin carboxyl carrier subunit NP_840733.1 707352 D 228410 CDS NP_840734.1 30248664 1081592 707880..709238 1 NC_004757.1 accC1; biotin carboxylase protein 709238 accC1 1081592 accC1 Nitrosomonas europaea ATCC 19718 accC1; biotin carboxylase protein NP_840734.1 707880 D 228410 CDS NP_840735.1 30248665 1081593 709274..710215 1 NC_004757.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 710215 prmA 1081593 prmA Nitrosomonas europaea ATCC 19718 50S ribosomal protein L11 methyltransferase NP_840735.1 709274 D 228410 CDS NP_840736.1 30248666 1081594 710212..710964 1 NC_004757.1 hypothetical protein 710964 1081594 NE0655 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840736.1 710212 D 228410 CDS NP_840737.1 30248667 1081595 complement(711011..712321) 1 NC_004757.1 cell wall hydrolase/autolysin 712321 amiB 1081595 amiB Nitrosomonas europaea ATCC 19718 cell wall hydrolase/autolysin NP_840737.1 711011 R 228410 CDS NP_840738.1 30248668 1081596 complement(712318..712794) 1 NC_004757.1 hydrolase 712794 1081596 NE0657 Nitrosomonas europaea ATCC 19718 hydrolase NP_840738.1 712318 R 228410 CDS NP_840739.1 30248669 1081597 complement(712838..713536) 1 NC_004757.1 short-chain dehydrogenase/reductase 713536 1081597 NE0658 Nitrosomonas europaea ATCC 19718 short-chain dehydrogenase/reductase NP_840739.1 712838 R 228410 CDS NP_840740.1 30248670 1081598 713834..714997 1 NC_004757.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 714997 metK 1081598 metK Nitrosomonas europaea ATCC 19718 S-adenosylmethionine synthetase NP_840740.1 713834 D 228410 CDS NP_840741.1 30248671 1081599 715129..716565 1 NC_004757.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 716565 ahcY 1081599 ahcY Nitrosomonas europaea ATCC 19718 S-adenosyl-L-homocysteine hydrolase NP_840741.1 715129 D 228410 CDS NP_840742.1 30248672 1081600 716736..717581 1 NC_004757.1 5,10-methylenetetrahydrofolate reductase oxidoreductase MetF 717581 metF 1081600 metF Nitrosomonas europaea ATCC 19718 5,10-methylenetetrahydrofolate reductase oxidoreductase MetF NP_840742.1 716736 D 228410 CDS NP_840743.1 30248673 1081601 719259..719885 1 NC_004757.1 IS4 family transposase 719885 1081601 NE0662 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_840743.1 719259 D 228410 CDS NP_840744.1 30248674 1081604 complement(720338..721147) 1 NC_004757.1 hypothetical protein 721147 1081604 NE0665 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840744.1 720338 R 228410 CDS NP_840745.1 30248675 1081605 complement(721379..722767) 1 NC_004757.1 sensory transduction histidine kinase 722767 1081605 NE0666 Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_840745.1 721379 R 228410 CDS NP_840746.1 30248676 1081606 complement(722764..723450) 1 NC_004757.1 response regulator 723450 1081606 NE0667 Nitrosomonas europaea ATCC 19718 response regulator NP_840746.1 722764 R 228410 CDS NP_840747.1 30248677 1081607 complement(723463..724851) 1 NC_004757.1 Outer membrane efflux protein 724851 1081607 NE0668 Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_840747.1 723463 R 228410 CDS NP_840748.1 30248678 1081608 complement(724848..727988) 1 NC_004757.1 acriflavin resistance protein 727988 1081608 NE0669 Nitrosomonas europaea ATCC 19718 acriflavin resistance protein NP_840748.1 724848 R 228410 CDS NP_840749.1 30248679 1081609 complement(727999..728997) 1 NC_004757.1 membrane fusion protein MtrC 728997 1081609 NE0670 Nitrosomonas europaea ATCC 19718 membrane fusion protein MtrC NP_840749.1 727999 R 228410 CDS NP_840750.1 30248680 1081610 729551..731041 1 NC_004757.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 731041 sbcB 1081610 sbcB Nitrosomonas europaea ATCC 19718 exonuclease I NP_840750.1 729551 D 228410 CDS NP_840751.1 30248681 1081611 731041..731757 1 NC_004757.1 hypothetical protein 731757 1081611 NE0672 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840751.1 731041 D 228410 CDS NP_840752.1 30248682 1081612 complement(731786..733045) 1 NC_004757.1 glycolate oxidase iron-sulfur subunit 733045 glcF 1081612 glcF Nitrosomonas europaea ATCC 19718 glycolate oxidase iron-sulfur subunit NP_840752.1 731786 R 228410 CDS NP_840753.1 30248683 1081613 complement(733049..734134) 1 NC_004757.1 glycolate oxidase FAD binding subunit 734134 glcE 1081613 glcE Nitrosomonas europaea ATCC 19718 glycolate oxidase FAD binding subunit NP_840753.1 733049 R 228410 CDS NP_840754.1 30248684 1081614 complement(734144..735598) 1 NC_004757.1 glcD; glycolate oxidase subunit GlcD 735598 glcD 1081614 glcD Nitrosomonas europaea ATCC 19718 glcD; glycolate oxidase subunit GlcD NP_840754.1 734144 R 228410 CDS NP_840755.1 30248685 1081615 complement(735588..736508) 1 NC_004757.1 oxidoreductase 736508 1081615 NE0676 Nitrosomonas europaea ATCC 19718 oxidoreductase NP_840755.1 735588 R 228410 CDS NP_840756.1 30248686 1081616 736794..737675 1 NC_004757.1 ADP-glucose pyrophosphorylase 737675 rmlA 1081616 rmlA Nitrosomonas europaea ATCC 19718 ADP-glucose pyrophosphorylase NP_840756.1 736794 D 228410 CDS NP_840757.1 30248687 1081617 737675..738220 1 NC_004757.1 dTDP-4-dehydrorhamnose 3,5-epimerase 738220 rmlC 1081617 rmlC Nitrosomonas europaea ATCC 19718 dTDP-4-dehydrorhamnose 3,5-epimerase NP_840757.1 737675 D 228410 CDS NP_840758.1 30248688 1081618 738290..739297 1 NC_004757.1 NAD-dependent epimerase/dehydratase family protein 739297 1081618 NE0679 Nitrosomonas europaea ATCC 19718 NAD-dependent epimerase/dehydratase family protein NP_840758.1 738290 D 228410 CDS NP_840759.1 30248689 1081619 739381..740376 1 NC_004757.1 formate and nitrite transporters 740376 yrhG 1081619 yrhG Nitrosomonas europaea ATCC 19718 formate and nitrite transporters NP_840759.1 739381 D 228410 CDS NP_840760.1 30248690 1081620 complement(740422..740991) 1 NC_004757.1 transmembrane protein 740991 1081620 NE0681 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_840760.1 740422 R 228410 CDS NP_840761.1 30248691 1081621 complement(740975..741604) 1 NC_004757.1 SCO1/SenC 741604 1081621 NE0682 Nitrosomonas europaea ATCC 19718 SCO1/SenC NP_840761.1 740975 R 228410 CDS NP_840762.1 30248692 1081622 complement(741698..743176) 1 NC_004757.1 cytochrome c oxidase subunit I 743176 coxA2 1081622 coxA2 Nitrosomonas europaea ATCC 19718 cytochrome c oxidase subunit I NP_840762.1 741698 R 228410 CDS NP_840763.1 30248693 1081623 complement(743221..743745) 1 NC_004757.1 similar to cytochrome-c oxidase (EC 1.9.3.1) chain II [imported] - Bacillus stearothermophilus, evalue=5.00e-12, 36% identity; cytochrome-c oxidase chain II 743745 coxB 1081623 coxB Nitrosomonas europaea ATCC 19718 cytochrome-c oxidase chain II NP_840763.1 743221 R 228410 CDS NP_840764.1 30248694 1081624 744036..745448 1 NC_004757.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 745448 leuC 1081624 leuC Nitrosomonas europaea ATCC 19718 isopropylmalate isomerase large subunit NP_840764.1 744036 D 228410 CDS NP_840765.1 30248695 1081625 745482..745610 1 NC_004757.1 hypothetical protein 745610 1081625 NE0686 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840765.1 745482 D 228410 CDS NP_840766.1 30248696 1081626 745616..746281 1 NC_004757.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 746281 leuD 1081626 leuD Nitrosomonas europaea ATCC 19718 isopropylmalate isomerase small subunit NP_840766.1 745616 D 228410 CDS NP_840767.1 30248697 1081627 746278..747348 1 NC_004757.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 747348 leuB 1081627 leuB Nitrosomonas europaea ATCC 19718 3-isopropylmalate dehydrogenase NP_840767.1 746278 D 228410 CDS NP_840768.1 30248698 1081628 747497..748618 1 NC_004757.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 748618 asd 1081628 asd Nitrosomonas europaea ATCC 19718 aspartate-semialdehyde dehydrogenase NP_840768.1 747497 D 228410 CDS NP_840769.1 30248699 1081629 748820..751114 1 NC_004757.1 transmembrane protein 751114 1081629 NE0690 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_840769.1 748820 D 228410 CDS NP_840770.1 30248700 1081630 751240..752058 1 NC_004757.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 752058 truA 1081630 truA Nitrosomonas europaea ATCC 19718 tRNA pseudouridine synthase A NP_840770.1 751240 D 228410 CDS NP_840771.1 30248701 1081631 752115..752750 1 NC_004757.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 752750 trpF 1081631 trpF Nitrosomonas europaea ATCC 19718 N-(5'-phosphoribosyl)anthranilate isomerase NP_840771.1 752115 D 228410 CDS NP_840772.1 30248702 1081632 752734..753927 1 NC_004757.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 753927 trpB 1081632 trpB Nitrosomonas europaea ATCC 19718 tryptophan synthase subunit beta NP_840772.1 752734 D 228410 CDS NP_840773.1 30248703 1081633 753980..754807 1 NC_004757.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 754807 trpA 1081633 trpA Nitrosomonas europaea ATCC 19718 tryptophan synthase subunit alpha NP_840773.1 753980 D 228410 CDS NP_840774.1 30248704 1081634 754811..755704 1 NC_004757.1 acetyl-CoA carboxylase carboxyl transferase subunit beta 755704 accD 1081634 accD Nitrosomonas europaea ATCC 19718 acetyl-CoA carboxylase carboxyl transferase subunit beta NP_840774.1 754811 D 228410 CDS NP_840775.1 30248705 1081635 755854..757146 1 NC_004757.1 cytoplasmic peptidoglycan synthetase 757146 folC 1081635 folC Nitrosomonas europaea ATCC 19718 cytoplasmic peptidoglycan synthetase NP_840775.1 755854 D 228410 CDS NP_840776.1 30248706 1081636 757167..757823 1 NC_004757.1 transmembrane protein 757823 1081636 NE0697 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_840776.1 757167 D 228410 CDS NP_840777.1 30248707 1081637 757820..758320 1 NC_004757.1 colicin V production protein 758320 cvpA 1081637 cvpA Nitrosomonas europaea ATCC 19718 colicin V production protein NP_840777.1 757820 D 228410 CDS NP_840778.1 30248708 1081638 758425..759942 1 NC_004757.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 759942 purF 1081638 purF Nitrosomonas europaea ATCC 19718 amidophosphoribosyltransferase NP_840778.1 758425 D 228410 CDS NP_840779.1 30248709 1081639 759959..761134 1 NC_004757.1 catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase 761134 metZ 1081639 metZ Nitrosomonas europaea ATCC 19718 O-succinylhomoserine sulfhydrylase NP_840779.1 759959 D 228410 CDS NP_840780.1 30248710 1081640 761246..762757 1 NC_004757.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 762757 ilvA 1081640 ilvA Nitrosomonas europaea ATCC 19718 threonine dehydratase NP_840780.1 761246 D 228410 CDS NP_840781.1 30248711 1081641 complement(762841..763176) 1 NC_004757.1 hypothetical protein 763176 1081641 NE0702 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840781.1 762841 R 228410 CDS NP_840782.1 30248712 1081642 complement(763176..763451) 1 NC_004757.1 hypothetical protein 763451 1081642 NE0703 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840782.1 763176 R 228410 CDS NP_840783.1 30248713 1081643 complement(763648..764361) 1 NC_004757.1 hypothetical protein 764361 1081643 NE0704 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840783.1 763648 R 228410 CDS NP_840784.1 30248714 1081644 complement(764426..766519) 1 NC_004757.1 general (type II) secretion pathway (GSP) D protein 766519 1081644 NE0705 Nitrosomonas europaea ATCC 19718 general (type II) secretion pathway (GSP) D protein NP_840784.1 764426 R 228410 CDS NP_840785.1 30248715 1081645 complement(766516..767037) 1 NC_004757.1 hypothetical protein 767037 1081645 NE0706 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840785.1 766516 R 228410 CDS NP_840786.1 30248716 1081646 complement(767048..767578) 1 NC_004757.1 hypothetical protein 767578 1081646 NE0707 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840786.1 767048 R 228410 CDS NP_840787.1 30248717 1081647 complement(767637..768488) 1 NC_004757.1 integrase catalytic subunit 768488 1081647 NE0708 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840787.1 767637 R 228410 CDS NP_840788.1 30248718 1081648 complement(768542..768865) 1 NC_004757.1 transposase IS911 768865 1081648 NE0709 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_840788.1 768542 R 228410 CDS NP_840789.1 30248719 1081649 complement(768964..769461) 1 NC_004757.1 hypothetical protein 769461 1081649 NE0710 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840789.1 768964 R 228410 CDS NP_840790.1 30248720 1081650 complement(769783..770139) 1 NC_004757.1 hypothetical protein 770139 1081650 NE0711 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840790.1 769783 R 228410 CDS NP_840791.1 30248721 1081651 770522..770818 1 NC_004757.1 hypothetical protein 770818 1081651 NE0712 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840791.1 770522 D 228410 CDS NP_840792.1 30248722 1081652 770815..771069 1 NC_004757.1 hypothetical protein 771069 1081652 NE0713 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840792.1 770815 D 228410 CDS NP_840793.1 30248723 1081653 771266..772168 1 NC_004757.1 integrase catalytic subunit 772168 1081653 NE0714 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840793.1 771266 D 228410 CDS NP_840794.1 30248724 1081654 772252..772659 1 NC_004757.1 transposase 772659 1081654 NE0715 Nitrosomonas europaea ATCC 19718 transposase NP_840794.1 772252 D 228410 CDS NP_840795.1 30248725 1081655 772659..773027 1 NC_004757.1 IS4 family transposase 773027 1081655 NE0716 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_840795.1 772659 D 228410 CDS NP_840796.1 30248726 1081656 complement(773113..773727) 1 NC_004757.1 cold shock DNA-binding domain-containing protein 773727 1081656 NE0717 Nitrosomonas europaea ATCC 19718 cold shock DNA-binding domain-containing protein NP_840796.1 773113 R 228410 CDS NP_840797.1 30248727 1081657 complement(773820..774359) 1 NC_004757.1 hypothetical protein 774359 1081657 NE0718 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840797.1 773820 R 228410 CDS NP_840798.1 30248728 1081658 complement(774690..775046) 1 NC_004757.1 hypothetical protein 775046 1081658 NE0719 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840798.1 774690 R 228410 CDS NP_840799.1 30248729 1081659 complement(775153..776940) 1 NC_004757.1 ABC transporter ATP-binding protein/permease 776940 1081659 NE0720 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein/permease NP_840799.1 775153 R 228410 CDS NP_840800.1 30248730 1081660 777123..778001 1 NC_004757.1 COGS group COG0313, Predicted methyltransferases, evalue=3e-63; methyltransferase 778001 yraL 1081660 yraL Nitrosomonas europaea ATCC 19718 methyltransferase NP_840800.1 777123 D 228410 CDS NP_840801.1 30248731 1081661 complement(778023..779075) 1 NC_004757.1 AraC type helix-turn-helix 779075 1081661 NE0722 Nitrosomonas europaea ATCC 19718 AraC type helix-turn-helix NP_840801.1 778023 R 228410 CDS NP_840802.1 30248732 1081662 779355..782954 1 NC_004757.1 hypothetical protein 782954 1081662 NE0723 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840802.1 779355 D 228410 CDS NP_840803.1 30248733 1081663 complement(783032..784495) 1 NC_004757.1 hypothetical protein 784495 1081663 NE0724 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840803.1 783032 R 228410 CDS NP_840804.1 30248734 1083622 complement(784792..785007) 1 NC_004757.1 hypothetical protein 785007 1083622 NE0725 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840804.1 784792 R 228410 CDS NP_840805.1 30248735 1081664 785977..786675 1 NC_004757.1 hypothetical protein 786675 1081664 NE0726 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840805.1 785977 D 228410 CDS NP_840806.1 30248736 1081665 786772..787821 1 NC_004757.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 787821 pyrC 1081665 pyrC Nitrosomonas europaea ATCC 19718 dihydroorotase NP_840806.1 786772 D 228410 CDS NP_840807.1 30248737 1081666 complement(787849..789105) 1 NC_004757.1 sensory transduction histidine kinase 789105 1081666 NE0728 Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_840807.1 787849 R 228410 CDS NP_840808.1 30248738 1081667 complement(789105..789797) 1 NC_004757.1 response regulator 789797 1081667 NE0729 Nitrosomonas europaea ATCC 19718 response regulator NP_840808.1 789105 R 228410 CDS NP_840809.1 30248739 1081668 789946..790524 1 NC_004757.1 ferric uptake regulator family protein 790524 1081668 NE0730 Nitrosomonas europaea ATCC 19718 ferric uptake regulator family protein NP_840809.1 789946 D 228410 CDS NP_840810.1 30248740 1081669 790757..792976 1 NC_004757.1 TonB-dependent receptor protein 792976 1081669 NE0731 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840810.1 790757 D 228410 CDS NP_840811.1 30248741 1081670 complement(793128..794285) 1 NC_004757.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 794285 ybbB 1081670 ybbB Nitrosomonas europaea ATCC 19718 tRNA 2-selenouridine synthase NP_840811.1 793128 R 228410 CDS NP_840812.1 30248742 1081671 complement(794278..795420) 1 NC_004757.1 AIR synthase 795420 selD 1081671 selD Nitrosomonas europaea ATCC 19718 AIR synthase NP_840812.1 794278 R 228410 CDS NP_840813.1 30248743 1081672 795525..797465 1 NC_004757.1 ABC transporter ATP-binding protein 797465 abcZ 1081672 abcZ Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein NP_840813.1 795525 D 228410 CDS NP_840814.1 30248744 1081673 797612..797896 1 NC_004757.1 cytochrome c, class IC:cytochrome c, class I 797896 1081673 NE0735 Nitrosomonas europaea ATCC 19718 cytochrome c, class IC:cytochrome c, class I NP_840814.1 797612 D 228410 CDS NP_840815.1 30248745 1081674 797930..798256 1 NC_004757.1 cytochrome c, class IC:cytochrome c, class I 798256 1081674 NE0736 Nitrosomonas europaea ATCC 19718 cytochrome c, class IC:cytochrome c, class I NP_840815.1 797930 D 228410 CDS NP_840816.1 30248746 1081675 complement(798327..798821) 1 NC_004757.1 hypothetical protein 798821 1081675 NE0737 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840816.1 798327 R 228410 CDS NP_840817.1 30248747 1081676 798953..799828 1 NC_004757.1 hypothetical protein 799828 1081676 NE0738 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840817.1 798953 D 228410 CDS NP_840818.1 30248748 1081677 799908..800234 1 NC_004757.1 cytochrome c, class I 800234 1081677 NE0739 Nitrosomonas europaea ATCC 19718 cytochrome c, class I NP_840818.1 799908 D 228410 CDS NP_840819.1 30248749 1081678 800250..801197 1 NC_004757.1 hypothetical protein 801197 1081678 NE0740 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840819.1 800250 D 228410 CDS NP_840820.1 30248750 1081679 801210..802754 1 NC_004757.1 FAD linked oxidase, N-terminal:FAD linked oxidase, C-terminal 802754 1081679 NE0741 Nitrosomonas europaea ATCC 19718 FAD linked oxidase, N-terminal:FAD linked oxidase, C-terminal NP_840820.1 801210 D 228410 CDS NP_840821.1 30248751 1081680 802806..803921 1 NC_004757.1 zinc-containing alcohol dehydrogenase superfamily protein 803921 1081680 NE0742 Nitrosomonas europaea ATCC 19718 zinc-containing alcohol dehydrogenase superfamily protein NP_840821.1 802806 D 228410 CDS NP_840822.1 30248752 1081682 complement(805211..806182) 1 NC_004757.1 hypothetical protein 806182 1081682 NE0744 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840822.1 805211 R 228410 CDS NP_840823.1 30248753 1081683 complement(806371..807495) 1 NC_004757.1 hypothetical protein 807495 1081683 NE0745 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840823.1 806371 R 228410 CDS NP_840824.1 30248754 1081684 808629..810185 1 NC_004757.1 hypothetical protein 810185 1081684 NE0746 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840824.1 808629 D 228410 CDS NP_840825.1 30248755 1081687 complement(811455..811787) 1 NC_004757.1 transposase IS911 811787 1081687 NE0749 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_840825.1 811455 R 228410 CDS NP_840826.1 30248756 1081689 813230..813790 1 NC_004757.1 site-specific recombinase 813790 tnpR 1081689 tnpR Nitrosomonas europaea ATCC 19718 site-specific recombinase NP_840826.1 813230 D 228410 CDS NP_840827.1 30248757 1081690 complement(813965..814624) 1 NC_004757.1 hypothetical protein 814624 1081690 NE0752 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840827.1 813965 R 228410 CDS NP_840828.1 30248758 1081692 complement(815092..815475) 1 NC_004757.1 TonB-dependent receptor 815475 1081692 NE0754 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor NP_840828.1 815092 R 228410 CDS NP_840829.1 30248759 1081693 complement(815627..815959) 1 NC_004757.1 hypothetical protein 815959 1081693 NE0755 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840829.1 815627 R 228410 CDS NP_840830.1 30248760 1081694 complement(815952..816461) 1 NC_004757.1 hypothetical protein 816461 1081694 NE0756 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840830.1 815952 R 228410 CDS NP_840831.1 30248761 1081695 complement(816498..820697) 1 NC_004757.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 820697 cobN 1081695 cobN Nitrosomonas europaea ATCC 19718 cobaltochelatase subunit CobN NP_840831.1 816498 R 228410 CDS NP_840832.1 30248762 1081696 complement(820777..823050) 1 NC_004757.1 TonB-dependent receptor protein 823050 1081696 NE0758 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840832.1 820777 R 228410 CDS NP_840833.1 30248763 1081697 823592..824023 1 NC_004757.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 824023 1081697 NE0759 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840833.1 823592 D 228410 CDS NP_840834.1 30248764 1081698 824076..825548 1 NC_004757.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 825548 nusA 1081698 nusA Nitrosomonas europaea ATCC 19718 transcription elongation factor NusA NP_840834.1 824076 D 228410 CDS NP_840835.1 30248765 1081699 825643..828312 1 NC_004757.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 828312 infB 1081699 infB Nitrosomonas europaea ATCC 19718 translation initiation factor IF-2 NP_840835.1 825643 D 228410 CDS NP_840836.1 30248766 1081700 828363..828716 1 NC_004757.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 828716 rbfA 1081700 rbfA Nitrosomonas europaea ATCC 19718 ribosome-binding factor A NP_840836.1 828363 D 228410 CDS NP_840837.1 30248767 1081701 828817..829743 1 NC_004757.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 829743 truB 1081701 truB Nitrosomonas europaea ATCC 19718 tRNA pseudouridine synthase B NP_840837.1 828817 D 228410 CDS NP_840838.1 30248768 1081702 829811..830452 1 NC_004757.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 830452 ccmA 1081702 ccmA Nitrosomonas europaea ATCC 19718 cytochrome c biogenesis protein CcmA NP_840838.1 829811 D 228410 CDS NP_840839.1 30248769 1081703 830459..831118 1 NC_004757.1 heme exporter protein B 831118 ccmB 1081703 ccmB Nitrosomonas europaea ATCC 19718 heme exporter protein B NP_840839.1 830459 D 228410 CDS NP_840840.1 30248770 1081704 831223..831966 1 NC_004757.1 heme exporter CcmC 831966 ccmC 1081704 ccmC Nitrosomonas europaea ATCC 19718 heme exporter CcmC NP_840840.1 831223 D 228410 CDS NP_840841.1 30248771 1081705 832142..832591 1 NC_004757.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 832591 ccmE 1081705 ccmE Nitrosomonas europaea ATCC 19718 cytochrome c-type biogenesis protein CcmE NP_840841.1 832142 D 228410 CDS NP_840842.1 30248772 1081706 832633..834684 1 NC_004757.1 cytochrome c-type biogenesis protein (CcmF) 834684 ccmF 1081706 ccmF Nitrosomonas europaea ATCC 19718 cytochrome c-type biogenesis protein (CcmF) NP_840842.1 832633 D 228410 CDS NP_840843.1 30248773 1081707 834681..835205 1 NC_004757.1 periplasmic protein thiol:disulfide oxidoreductase DsbE 835205 ccmG 1081707 ccmG Nitrosomonas europaea ATCC 19718 periplasmic protein thiol:disulfide oxidoreductase DsbE NP_840843.1 834681 D 228410 CDS NP_840844.1 30248774 1081708 835213..835722 1 NC_004757.1 cytochrome C-type biogenesis protein CcmH 835722 ccmH 1081708 ccmH Nitrosomonas europaea ATCC 19718 cytochrome C-type biogenesis protein CcmH NP_840844.1 835213 D 228410 CDS NP_840845.1 30248775 1081709 835719..837050 1 NC_004757.1 hypothetical protein 837050 cycH 1081709 cycH Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840845.1 835719 D 228410 CDS NP_840846.1 30248776 1081710 837081..837542 1 NC_004757.1 bacterioferritin comigratory protein 837542 bcp 1081710 bcp Nitrosomonas europaea ATCC 19718 bacterioferritin comigratory protein NP_840846.1 837081 D 228410 CDS NP_840847.1 30248777 1081711 complement(837591..838574) 1 NC_004757.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 838574 1081711 NE0773 Nitrosomonas europaea ATCC 19718 malate dehydrogenase NP_840847.1 837591 R 228410 CDS NP_840848.1 30248778 1081712 838800..840218 1 NC_004757.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 840218 1081712 NE0774 Nitrosomonas europaea ATCC 19718 dihydrolipoamide dehydrogenase NP_840848.1 838800 D 228410 CDS NP_840849.1 30248779 1081714 840997..841830 1 NC_004757.1 tRNA/rRNA methyltransferase SpoU 841830 1081714 NE0775 Nitrosomonas europaea ATCC 19718 tRNA/rRNA methyltransferase SpoU NP_840849.1 840997 D 228410 CDS NP_840850.1 30248780 1081715 complement(841856..843214) 1 NC_004757.1 hypothetical protein 843214 1081715 NE0776 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840850.1 841856 R 228410 CDS NP_840851.1 30248781 1081716 complement(843249..844001) 1 NC_004757.1 esterase/lipase/thioesterase family protein 844001 TGL2 1081716 TGL2 Nitrosomonas europaea ATCC 19718 esterase/lipase/thioesterase family protein NP_840851.1 843249 R 228410 CDS NP_840852.1 30248782 1081717 complement(844096..845430) 1 NC_004757.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 845430 argA 1081717 argA Nitrosomonas europaea ATCC 19718 N-acetylglutamate synthase NP_840852.1 844096 R 228410 CDS NP_840853.1 30248783 1081718 complement(845454..846212) 1 NC_004757.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 846212 1081718 NE0779 Nitrosomonas europaea ATCC 19718 16S ribosomal RNA methyltransferase RsmE NP_840853.1 845454 R 228410 CDS NP_840854.1 30248784 1081719 846309..846866 1 NC_004757.1 hypothetical protein 846866 1081719 NE0780 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840854.1 846309 D 228410 CDS NP_840855.1 30248785 1081720 846851..847672 1 NC_004757.1 myo-inositol-1(or 4)-monophosphatase 847672 1081720 NE0781 Nitrosomonas europaea ATCC 19718 myo-inositol-1(or 4)-monophosphatase NP_840855.1 846851 D 228410 CDS NP_840856.1 30248786 1081721 complement(847821..849440) 1 NC_004757.1 periplasmic cell division protein (SufI) 849440 sufI 1081721 sufI Nitrosomonas europaea ATCC 19718 periplasmic cell division protein (SufI) NP_840856.1 847821 R 228410 CDS NP_840857.1 30248787 1081722 849705..851366 1 NC_004757.1 hypothetical protein 851366 1081722 NE0783 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840857.1 849705 D 228410 CDS NP_840858.1 30248788 1081723 851418..851753 1 NC_004757.1 hypothetical protein 851753 1081723 NE0784 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840858.1 851418 D 228410 CDS NP_840859.1 30248789 1081724 complement(851792..853879) 1 NC_004757.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 853879 uvrB 1081724 uvrB Nitrosomonas europaea ATCC 19718 excinuclease ABC subunit B NP_840859.1 851792 R 228410 CDS NP_840860.1 30248790 1081725 853954..855147 1 NC_004757.1 class-I aminotransferase 855147 aatA 1081725 aatA Nitrosomonas europaea ATCC 19718 class-I aminotransferase NP_840860.1 853954 D 228410 CDS NP_840861.1 30248791 1081726 complement(855289..855558) 1 NC_004757.1 hypothetical protein 855558 1081726 NE0787 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840861.1 855289 R 228410 CDS NP_840862.1 30248792 1081727 857641..858021 1 NC_004757.1 hypothetical protein 858021 1081727 NE0788 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840862.1 857641 D 228410 CDS NP_840863.1 30248793 1081728 858145..858840 1 NC_004757.1 hypothetical protein 858840 1081728 NE0789 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840863.1 858145 D 228410 CDS NP_840864.1 30248794 1081729 858890..859366 1 NC_004757.1 hypothetical protein 859366 1081729 NE0790 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840864.1 858890 D 228410 CDS NP_840865.1 30248795 1081730 859388..860776 1 NC_004757.1 hypothetical protein 860776 1081730 NE0791 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840865.1 859388 D 228410 CDS NP_840866.1 30248796 1081731 complement(860966..861499) 1 NC_004757.1 hypothetical protein 861499 1081731 NE0792 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840866.1 860966 R 228410 CDS NP_840867.1 30248797 1081732 861712..862803 1 NC_004757.1 similar to (NC_003295) PROBABLE RIBOFLAVIN BIOSYNTHESIS BIFUNCTIONAL RIBD, evalue=1.00e-101, 52% identity; riboflavin biosynthesis bifunctional RibD 862803 ribD 1081732 ribD Nitrosomonas europaea ATCC 19718 riboflavin biosynthesis bifunctional RibD NP_840867.1 861712 D 228410 CDS NP_840868.1 30248798 1081733 862895..864100 1 NC_004757.1 group 1 glycosyl transferase 864100 1081733 NE0794 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_840868.1 862895 D 228410 CDS NP_840869.1 30248799 1081734 864253..865521 1 NC_004757.1 group 1 glycosyl transferase 865521 1081734 NE0795 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_840869.1 864253 D 228410 CDS NP_840870.1 30248800 1081735 865524..866879 1 NC_004757.1 capsular polysaccharide biosynthesis protein CapK 866879 1081735 NE0796 Nitrosomonas europaea ATCC 19718 capsular polysaccharide biosynthesis protein CapK NP_840870.1 865524 D 228410 CDS NP_840871.1 30248801 1081736 complement(866881..867501) 1 NC_004757.1 hypothetical protein 867501 1081736 NE0797 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840871.1 866881 R 228410 CDS NP_840872.1 30248802 1081737 867782..868258 1 NC_004757.1 hypothetical protein 868258 1081737 NE0798 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840872.1 867782 D 228410 CDS NP_840873.1 30248803 1081738 868346..869503 1 NC_004757.1 hypothetical protein 869503 1081738 NE0799 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840873.1 868346 D 228410 CDS NP_840874.1 30248804 1081739 869553..870371 1 NC_004757.1 hypothetical protein 870371 1081739 NE0800 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840874.1 869553 D 228410 CDS NP_840875.1 30248805 1081740 870390..871466 1 NC_004757.1 hypothetical protein 871466 1081740 NE0801 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840875.1 870390 D 228410 CDS NP_840876.1 30248806 1081741 871463..872530 1 NC_004757.1 hypothetical protein 872530 1081741 NE0802 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840876.1 871463 D 228410 CDS NP_840877.1 30248807 1081742 872532..873767 1 NC_004757.1 CDP-alcohol phosphatidyltransferase 873767 1081742 NE0803 Nitrosomonas europaea ATCC 19718 CDP-alcohol phosphatidyltransferase NP_840877.1 872532 D 228410 CDS NP_840878.1 30248808 1081743 873775..874740 1 NC_004757.1 DAG-kinase catalytic domain-containing protein 874740 1081743 NE0804 Nitrosomonas europaea ATCC 19718 DAG-kinase catalytic domain-containing protein NP_840878.1 873775 D 228410 CDS NP_840879.1 30248809 1081744 874755..875720 1 NC_004757.1 hypothetical protein 875720 1081744 NE0805 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840879.1 874755 D 228410 CDS NP_840880.1 30248810 1081745 875773..876420 1 NC_004757.1 hypothetical protein 876420 1081745 NE0806 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840880.1 875773 D 228410 CDS NP_840881.1 30248811 1081746 complement(876438..876893) 1 NC_004757.1 hypothetical protein 876893 1081746 NE0807 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840881.1 876438 R 228410 CDS NP_840882.1 30248812 1081747 877411..880140 1 NC_004757.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 880140 secA 1081747 secA Nitrosomonas europaea ATCC 19718 preprotein translocase subunit SecA NP_840882.1 877411 D 228410 CDS NP_840883.1 30248813 1081748 880317..880922 1 NC_004757.1 Rieske iron-sulfur protein 2Fe-2S subunit 880922 1081748 NE0809 Nitrosomonas europaea ATCC 19718 Rieske iron-sulfur protein 2Fe-2S subunit NP_840883.1 880317 D 228410 CDS NP_840884.1 30248814 1081749 880924..882171 1 NC_004757.1 cytochrome b/b6 882171 1081749 NE0810 Nitrosomonas europaea ATCC 19718 cytochrome b/b6 NP_840884.1 880924 D 228410 CDS NP_840885.1 30248815 1081750 882168..882872 1 NC_004757.1 cytochrome c1 882872 petC 1081750 petC Nitrosomonas europaea ATCC 19718 cytochrome c1 NP_840885.1 882168 D 228410 CDS NP_840886.1 30248816 1081751 882921..883520 1 NC_004757.1 sspA; transcription modulator protein 883520 sspA 1081751 sspA Nitrosomonas europaea ATCC 19718 sspA; transcription modulator protein NP_840886.1 882921 D 228410 CDS NP_840887.1 30248817 1081752 883517..883951 1 NC_004757.1 ClpXP protease specificity-enhancing factor 883951 sspB 1081752 sspB Nitrosomonas europaea ATCC 19718 ClpXP protease specificity-enhancing factor NP_840887.1 883517 D 228410 CDS NP_840888.1 30248818 1081755 complement(884935..885978) 1 NC_004757.1 integrase catalytic subunit 885978 1081755 NE0814 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_840888.1 884935 R 228410 CDS NP_840889.1 30248819 1081756 886198..886494 1 NC_004757.1 hypothetical protein 886494 1081756 NE0815 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840889.1 886198 D 228410 CDS NP_840890.1 30248820 1081757 complement(886597..888861) 1 NC_004757.1 TonB-dependent receptor protein 888861 1081757 NE0816 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_840890.1 886597 R 228410 CDS NP_840891.1 30248821 1081758 complement(889244..890248) 1 NC_004757.1 transmembrane sensor 890248 1081758 NE0817 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_840891.1 889244 R 228410 CDS NP_840892.1 30248822 1081759 complement(890344..890853) 1 NC_004757.1 RNA polymerase ECF-subfamily sigma-70 factor 890853 1081759 NE0818 Nitrosomonas europaea ATCC 19718 RNA polymerase ECF-subfamily sigma-70 factor NP_840892.1 890344 R 228410 CDS NP_840893.1 30248823 1081760 complement(891102..891734) 1 NC_004757.1 hypothetical protein 891734 1081760 NE0819 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840893.1 891102 R 228410 CDS NP_840894.1 30248824 1081761 complement(891960..893009) 1 NC_004757.1 zinc-containing alcohol dehydrogenase superfamily protein 893009 1081761 NE0820 Nitrosomonas europaea ATCC 19718 zinc-containing alcohol dehydrogenase superfamily protein NP_840894.1 891960 R 228410 CDS NP_840895.1 30248825 1081762 complement(893112..893846) 1 NC_004757.1 hypothetical protein 893846 1081762 NE0821 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840895.1 893112 R 228410 CDS NP_840896.1 30248826 1081763 complement(893830..894225) 1 NC_004757.1 hypothetical protein 894225 1081763 NE0822 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840896.1 893830 R 228410 CDS NP_840897.1 30248827 1081764 894418..896163 1 NC_004757.1 hypothetical protein 896163 1081764 NE0823 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840897.1 894418 D 228410 CDS NP_840898.1 30248828 1081765 896349..896873 1 NC_004757.1 hypothetical protein 896873 1081765 NE0824 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840898.1 896349 D 228410 CDS NP_840899.1 30248829 1081766 complement(896896..898095) 1 NC_004757.1 hypothetical protein 898095 1081766 NE0825 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840899.1 896896 R 228410 CDS NP_840900.1 30248830 1081767 complement(898104..899306) 1 NC_004757.1 hypothetical protein 899306 1081767 NE0826 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840900.1 898104 R 228410 CDS NP_840901.1 30248831 1081768 complement(899303..899974) 1 NC_004757.1 ABC transporter ATPase 899974 1081768 NE0827 Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_840901.1 899303 R 228410 CDS NP_840902.1 30248832 1081769 complement(899971..901125) 1 NC_004757.1 hemolysin D 901125 1081769 NE0828 Nitrosomonas europaea ATCC 19718 hemolysin D NP_840902.1 899971 R 228410 CDS NP_840903.1 30248833 1081770 complement(901146..901709) 1 NC_004757.1 hypothetical protein 901709 1081770 NE0829 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840903.1 901146 R 228410 CDS NP_840904.1 30248834 1081771 901779..903662 1 NC_004757.1 DNA mismatch repair protein MutS family protein 903662 1081771 NE0830 Nitrosomonas europaea ATCC 19718 DNA mismatch repair protein MutS family protein NP_840904.1 901779 D 228410 CDS NP_840905.1 30248835 1081772 903725..904903 1 NC_004757.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 904903 1081772 NE0831 Nitrosomonas europaea ATCC 19718 phospho-2-dehydro-3-deoxyheptonate aldolase NP_840905.1 903725 D 228410 CDS NP_840906.1 30248836 1081773 904931..905410 1 NC_004757.1 hypothetical protein 905410 1081773 NE0832 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840906.1 904931 D 228410 CDS NP_840907.1 30248837 1081774 905417..909172 1 NC_004757.1 HrpA-like helicases 909172 hrpA 1081774 hrpA Nitrosomonas europaea ATCC 19718 HrpA-like helicases NP_840907.1 905417 D 228410 CDS NP_840908.1 30248838 1081775 909337..911379 1 NC_004757.1 DEAD/DEAH box helicase 911379 1081775 NE0834 Nitrosomonas europaea ATCC 19718 DEAD/DEAH box helicase NP_840908.1 909337 D 228410 CDS NP_840909.1 30248839 1081776 complement(911376..914345) 1 NC_004757.1 Tn3 family transposase 914345 tnpA 1081776 tnpA Nitrosomonas europaea ATCC 19718 Tn3 family transposase NP_840909.1 911376 R 228410 CDS NP_840910.1 30248840 1081777 complement(914348..914908) 1 NC_004757.1 site-specific recombinase 914908 tnpR 1081777 tnpR Nitrosomonas europaea ATCC 19718 site-specific recombinase NP_840910.1 914348 R 228410 CDS NP_840911.1 30248841 1081778 complement(915038..916024) 1 NC_004757.1 hypothetical protein 916024 1081778 NE0837 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840911.1 915038 R 228410 CDS NP_840912.1 30248842 1081779 complement(916254..916619) 1 NC_004757.1 transcriptional regulator MerD 916619 merD 1081779 merD Nitrosomonas europaea ATCC 19718 transcriptional regulator MerD NP_840912.1 916254 R 228410 CDS NP_840913.1 30248843 1081780 complement(916637..918322) 1 NC_004757.1 mercuric reductase 918322 merA 1081780 merA Nitrosomonas europaea ATCC 19718 mercuric reductase NP_840913.1 916637 R 228410 CDS NP_840914.1 30248844 1081781 complement(918361..918783) 1 NC_004757.1 mercury transport protein MerC 918783 merC 1081781 merC Nitrosomonas europaea ATCC 19718 mercury transport protein MerC NP_840914.1 918361 R 228410 CDS NP_840915.1 30248845 1081782 complement(918812..919087) 1 NC_004757.1 mercury scavenger protein 919087 merP 1081782 merP Nitrosomonas europaea ATCC 19718 mercury scavenger protein NP_840915.1 918812 R 228410 CDS NP_840916.1 30248846 1081783 complement(919101..919451) 1 NC_004757.1 mercuric transport protein 919451 merT 1081783 merT Nitrosomonas europaea ATCC 19718 mercuric transport protein NP_840916.1 919101 R 228410 CDS NP_840917.1 30248847 1081784 919523..919948 1 NC_004757.1 transcriptional regulator MerR 919948 merR 1081784 merR Nitrosomonas europaea ATCC 19718 transcriptional regulator MerR NP_840917.1 919523 D 228410 CDS NP_840918.1 30248848 1081785 919923..920549 1 NC_004757.1 hypothetical protein 920549 1081785 NE0844 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840918.1 919923 D 228410 CDS NP_840919.1 30248849 1081786 920552..920842 1 NC_004757.1 hypothetical protein 920842 1081786 NE0845 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840919.1 920552 D 228410 CDS NP_840920.1 30248850 1081787 complement(921639..922223) 1 NC_004757.1 hypothetical protein 922223 1081787 NE0846 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840920.1 921639 R 228410 CDS NP_840921.1 30248851 1081788 complement(922351..923301) 1 NC_004757.1 hypothetical protein 923301 1081788 NE0847 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840921.1 922351 R 228410 CDS NP_840922.1 30248852 1081789 complement(923421..923873) 1 NC_004757.1 phosphoglycerate mutase family protein 923873 1081789 NE0848 Nitrosomonas europaea ATCC 19718 phosphoglycerate mutase family protein NP_840922.1 923421 R 228410 CDS NP_840923.1 30248853 1081790 complement(923929..924621) 1 NC_004757.1 nodulin 21 924621 1081790 NE0849 Nitrosomonas europaea ATCC 19718 nodulin 21 NP_840923.1 923929 R 228410 CDS NP_840924.1 30248854 1081791 complement(924637..925311) 1 NC_004757.1 phospholipase/carboxylesterase 925311 1081791 NE0850 Nitrosomonas europaea ATCC 19718 phospholipase/carboxylesterase NP_840924.1 924637 R 228410 CDS NP_840925.1 30248855 1081792 925390..926502 1 NC_004757.1 transglutaminase-like superfamily protein 926502 1081792 NE0851 Nitrosomonas europaea ATCC 19718 transglutaminase-like superfamily protein NP_840925.1 925390 D 228410 CDS NP_840926.1 30248856 1081793 complement(926615..928336) 1 NC_004757.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 928336 yvgQ 1081793 yvgQ Nitrosomonas europaea ATCC 19718 sulfite reductase subunit beta NP_840926.1 926615 R 228410 CDS NP_840927.1 30248857 1081794 complement(928345..930180) 1 NC_004757.1 sulfite reductase flavoprotein subunit 930180 yvgR 1081794 yvgR Nitrosomonas europaea ATCC 19718 sulfite reductase flavoprotein subunit NP_840927.1 928345 R 228410 CDS NP_840928.1 30248858 1081795 complement(930708..931664) 1 NC_004757.1 transcriptional regulator CysB-like protein 931664 cysB 1081795 cysB Nitrosomonas europaea ATCC 19718 transcriptional regulator CysB-like protein NP_840928.1 930708 R 228410 CDS NP_840929.1 30248859 1081796 931897..932595 1 NC_004757.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 932595 cysH 1081796 cysH Nitrosomonas europaea ATCC 19718 phosphoadenosine phosphosulfate reductase NP_840929.1 931897 D 228410 CDS NP_840930.1 30248860 1081797 932620..933528 1 NC_004757.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 933528 cysD 1081797 cysD Nitrosomonas europaea ATCC 19718 sulfate adenylyltransferase subunit 2 NP_840930.1 932620 D 228410 CDS NP_840931.1 30248861 1081798 933584..934855 1 NC_004757.1 GTP-binding elongation factor 934855 cysN 1081798 cysN Nitrosomonas europaea ATCC 19718 GTP-binding elongation factor NP_840931.1 933584 D 228410 CDS NP_840932.1 30248862 1081799 934943..938494 1 NC_004757.1 hypothetical protein 938494 1081799 NE0858 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840932.1 934943 D 228410 CDS NP_840933.1 30248863 1081800 938615..939742 1 NC_004757.1 alanine dehydrogenase and pyridine nucleotide transhydrogenase 939742 pntAa 1081800 pntAa Nitrosomonas europaea ATCC 19718 alanine dehydrogenase and pyridine nucleotide transhydrogenase NP_840933.1 938615 D 228410 CDS NP_840934.1 30248864 1081801 939798..940106 1 NC_004757.1 similar to (NC_003296) PROBABLE TRANSMEMBRANE NAD(P) TRANSHYDROGENASE (ALPHA SUBUNIT PART 2) TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] evalue=6.00e-34, 69% identity; transmembrane NAD(P) transhydrogenase (alpha subunit part 2) 940106 pntAb2 1081801 pntAb2 Nitrosomonas europaea ATCC 19718 transmembrane NAD(P) transhydrogenase (alpha subunit part 2) NP_840934.1 939798 D 228410 CDS NP_840935.1 30248865 1081802 940107..941486 1 NC_004757.1 NAD(P) transhydrogenase beta subunit 941486 pntB 1081802 pntB Nitrosomonas europaea ATCC 19718 NAD(P) transhydrogenase beta subunit NP_840935.1 940107 D 228410 CDS NP_840936.1 30248866 1081803 complement(941516..942313) 1 NC_004757.1 hypothetical protein 942313 1081803 NE0862 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840936.1 941516 R 228410 CDS NP_840937.1 30248867 1081804 complement(942493..942957) 1 NC_004757.1 bacterioferritin 942957 bfr 1081804 bfr Nitrosomonas europaea ATCC 19718 bacterioferritin NP_840937.1 942493 R 228410 CDS NP_840938.1 30248868 1081805 943461..944492 1 NC_004757.1 hypothetical protein 944492 1081805 NE0864 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840938.1 943461 D 228410 CDS NP_840939.1 30248869 1081806 944546..946081 1 NC_004757.1 PAS domain-containing protein 946081 1081806 NE0865 Nitrosomonas europaea ATCC 19718 PAS domain-containing protein NP_840939.1 944546 D 228410 CDS NP_840940.1 30248870 1081807 complement(946088..946975) 1 NC_004757.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 946975 hemH 1081807 hemH Nitrosomonas europaea ATCC 19718 phosphoribosylaminoimidazole-succinocarboxamide synthase NP_840940.1 946088 R 228410 CDS NP_840941.1 30248871 1081808 complement(947005..948135) 1 NC_004757.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase 948135 purK 1081808 purK Nitrosomonas europaea ATCC 19718 phosphoribosylaminoimidazole carboxylase ATPase NP_840941.1 947005 R 228410 CDS NP_840942.1 30248872 1081809 complement(948126..948623) 1 NC_004757.1 phosphoribosylaminoimidazole carboxylase catalytic subunit 948623 purE 1081809 purE Nitrosomonas europaea ATCC 19718 phosphoribosylaminoimidazole carboxylase catalytic subunit NP_840942.1 948126 R 228410 CDS NP_840943.1 30248873 1081810 948818..949249 1 NC_004757.1 biopolymer transport protein ExbD/TolR 949249 exbD2 1081810 exbD2 Nitrosomonas europaea ATCC 19718 biopolymer transport protein ExbD/TolR NP_840943.1 948818 D 228410 CDS NP_840944.1 30248874 1081811 949326..949964 1 NC_004757.1 manganese and iron superoxide dismutase 949964 sodB 1081811 sodB Nitrosomonas europaea ATCC 19718 manganese and iron superoxide dismutase NP_840944.1 949326 D 228410 CDS NP_840945.1 30248875 1081812 949974..950624 1 NC_004757.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 950624 hisG 1081812 hisG Nitrosomonas europaea ATCC 19718 ATP phosphoribosyltransferase catalytic subunit NP_840945.1 949974 D 228410 CDS NP_840946.1 30248876 1081813 950645..951943 1 NC_004757.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 951943 hisD 1081813 hisD Nitrosomonas europaea ATCC 19718 histidinol dehydrogenase NP_840946.1 950645 D 228410 CDS NP_840947.1 30248877 1081814 952057..953193 1 NC_004757.1 aromatic-ring hydroxylase 953193 ubiH 1081814 ubiH Nitrosomonas europaea ATCC 19718 aromatic-ring hydroxylase NP_840947.1 952057 D 228410 CDS NP_840948.1 30248878 1081815 953350..954363 1 NC_004757.1 hypothetical protein 954363 1081815 NE0874 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840948.1 953350 D 228410 CDS NP_840949.1 30248879 1081816 954360..954602 1 NC_004757.1 similar to (NC_003295) PROBABLE FACTOR-FOR-INVERSION-STIMULATION TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] evalue=3.00e-17, 50% identity; factor-for-inversion-stimulation transcription regulator protein 954602 fis 1081816 fis Nitrosomonas europaea ATCC 19718 factor-for-inversion-stimulation transcription regulator protein NP_840949.1 954360 D 228410 CDS NP_840950.1 30248880 1081817 954611..956173 1 NC_004757.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 956173 purH 1081817 purH Nitrosomonas europaea ATCC 19718 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase NP_840950.1 954611 D 228410 CDS NP_840951.1 30248881 1081818 956175..957491 1 NC_004757.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 957491 purD 1081818 purD Nitrosomonas europaea ATCC 19718 phosphoribosylamine--glycine ligase NP_840951.1 956175 D 228410 CDS NP_840952.1 30248882 1081819 complement(957751..958056) 1 NC_004757.1 hypothetical protein 958056 1081819 NE0878 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840952.1 957751 R 228410 CDS NP_840953.1 30248883 1081820 958130..959398 1 NC_004757.1 esterase/lipase/thioesterase family lipase 959398 1081820 NE0879 Nitrosomonas europaea ATCC 19718 esterase/lipase/thioesterase family lipase NP_840953.1 958130 D 228410 CDS NP_840954.1 30248884 1081821 complement(959532..961472) 1 NC_004757.1 ATP-dependent DNA helicase-like protein 961472 1081821 NE0880 Nitrosomonas europaea ATCC 19718 ATP-dependent DNA helicase-like protein NP_840954.1 959532 R 228410 CDS NP_840955.1 30248885 1081822 961684..963855 1 NC_004757.1 organic solvent tolerance transmembrane protein 963855 1081822 NE0881 Nitrosomonas europaea ATCC 19718 organic solvent tolerance transmembrane protein NP_840955.1 961684 D 228410 CDS NP_840956.1 30248886 1081823 963855..965201 1 NC_004757.1 PpiC-type peptidyl-prolyl cis-trans isomerase 965201 surA 1081823 surA Nitrosomonas europaea ATCC 19718 PpiC-type peptidyl-prolyl cis-trans isomerase NP_840956.1 963855 D 228410 CDS NP_840957.1 30248887 1081824 965254..966264 1 NC_004757.1 4-hydroxythreonine-4-phosphate dehydrogenase 966264 pdxA 1081824 pdxA Nitrosomonas europaea ATCC 19718 4-hydroxythreonine-4-phosphate dehydrogenase NP_840957.1 965254 D 228410 CDS NP_840958.1 30248888 1081825 966331..967104 1 NC_004757.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 967104 ksgA 1081825 ksgA Nitrosomonas europaea ATCC 19718 dimethyladenosine transferase NP_840958.1 966331 D 228410 CDS NP_840959.1 30248889 1081826 complement(967127..967618) 1 NC_004757.1 methylated-DNA--protein-cysteine methyltransferase 967618 ogt 1081826 ogt Nitrosomonas europaea ATCC 19718 methylated-DNA--protein-cysteine methyltransferase NP_840959.1 967127 R 228410 CDS NP_840960.1 30248890 1081827 complement(967814..968236) 1 NC_004757.1 hypothetical protein 968236 1081827 NE0886 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840960.1 967814 R 228410 CDS NP_840961.1 30248891 1081828 968320..968658 1 NC_004757.1 hypothetical protein 968658 1081828 NE0887 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840961.1 968320 D 228410 CDS NP_840962.1 30248892 1081829 968661..969668 1 NC_004757.1 hypothetical protein 969668 1081829 NE0888 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840962.1 968661 D 228410 CDS NP_840963.1 30248893 1081830 969733..970038 1 NC_004757.1 similar to (NC_001399) ORF C9 [Ralstonia solanacearum], evalue=6.00e-06, 29% identity; hypothetical protein 970038 1081830 NE0889 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840963.1 969733 D 228410 CDS NP_840964.1 30248894 1081831 970118..970321 1 NC_004757.1 hypothetical protein 970321 1081831 NE0890 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840964.1 970118 D 228410 CDS NP_840965.1 30248895 1081832 970704..972029 1 NC_004757.1 hypothetical protein 972029 1081832 NE0891 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840965.1 970704 D 228410 CDS NP_840966.1 30248896 1081833 972087..972377 1 NC_004757.1 phage gene 972377 1081833 NE0892 Nitrosomonas europaea ATCC 19718 phage gene NP_840966.1 972087 D 228410 CDS NP_840967.1 30248897 1081834 972374..973360 1 NC_004757.1 hypothetical protein 973360 1081834 NE0893 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840967.1 972374 D 228410 CDS NP_840968.1 30248898 1081835 complement(973599..974033) 1 NC_004757.1 hypothetical protein 974033 1081835 NE0894 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840968.1 973599 R 228410 CDS NP_840969.1 30248899 1081836 974236..974487 1 NC_004757.1 hypothetical protein 974487 1081836 NE0895 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840969.1 974236 D 228410 CDS NP_840970.1 30248900 1081837 974682..975419 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 975419 1081837 NE0896 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_840970.1 974682 D 228410 CDS NP_840971.1 30248901 1081838 complement(976038..976595) 1 NC_004757.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 976595 efp 1081838 efp Nitrosomonas europaea ATCC 19718 elongation factor P NP_840971.1 976038 R 228410 CDS NP_840972.1 30248902 1081839 complement(976669..977811) 1 NC_004757.1 hypothetical protein 977811 1081839 NE0898 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840972.1 976669 R 228410 CDS NP_840973.1 30248903 1081840 977894..978886 1 NC_004757.1 Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase 978886 ldhA 1081840 ldhA Nitrosomonas europaea ATCC 19718 D-lactate dehydrogenase NP_840973.1 977894 D 228410 CDS NP_840974.1 30248904 1081841 complement(978889..979326) 1 NC_004757.1 hypothetical protein 979326 1081841 NE0900 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840974.1 978889 R 228410 CDS NP_840975.1 30248905 1081842 complement(979354..982770) 1 NC_004757.1 PDZ domain-containing protein 982770 1081842 NE0901 Nitrosomonas europaea ATCC 19718 PDZ domain-containing protein NP_840975.1 979354 R 228410 CDS NP_840976.1 30248906 1081843 982940..984049 1 NC_004757.1 periplasmic component of the Tol biopolymer transport system 984049 1081843 NE0902 Nitrosomonas europaea ATCC 19718 periplasmic component of the Tol biopolymer transport system NP_840976.1 982940 D 228410 CDS NP_840977.1 30248907 1081844 complement(984210..985487) 1 NC_004757.1 cytochrome c 985487 1081844 NE0903 Nitrosomonas europaea ATCC 19718 cytochrome c NP_840977.1 984210 R 228410 CDS NP_840978.1 30248908 1081845 complement(985484..986203) 1 NC_004757.1 cytochrome c 986203 1081845 NE0904 Nitrosomonas europaea ATCC 19718 cytochrome c NP_840978.1 985484 R 228410 CDS NP_840979.1 30248909 1081846 986283..986708 1 NC_004757.1 hypothetical protein 986708 1081846 NE0905 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840979.1 986283 D 228410 CDS NP_840980.1 30248910 1081847 complement(986691..988550) 1 NC_004757.1 cell division protein FtsH 988550 ftsH 1081847 ftsH Nitrosomonas europaea ATCC 19718 cell division protein FtsH NP_840980.1 986691 R 228410 CDS NP_840981.1 30248911 1081848 988710..989816 1 NC_004757.1 alcohol dehydrogenase class III-like protein 989816 adhC1 1081848 adhC1 Nitrosomonas europaea ATCC 19718 alcohol dehydrogenase class III-like protein NP_840981.1 988710 D 228410 CDS NP_840982.1 30248912 1081849 989817..990695 1 NC_004757.1 hydrolase oxidoreductase protein 990695 1081849 NE0908 Nitrosomonas europaea ATCC 19718 hydrolase oxidoreductase protein NP_840982.1 989817 D 228410 CDS NP_840983.1 30248913 1081850 complement(990845..992020) 1 NC_004757.1 Orn/DAP/Arg decarboxylase family protein 992020 speC 1081850 speC Nitrosomonas europaea ATCC 19718 Orn/DAP/Arg decarboxylase family protein NP_840983.1 990845 R 228410 CDS NP_840984.1 30248914 1081851 992515..992781 1 NC_004757.1 hypothetical protein 992781 1081851 NE0910 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840984.1 992515 D 228410 CDS NP_840985.1 30248915 1081852 993053..994396 1 NC_004757.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 994396 rimO 1081852 rimO Nitrosomonas europaea ATCC 19718 ribosomal protein S12 methylthiotransferase NP_840985.1 993053 D 228410 CDS NP_840986.1 30248916 1081853 complement(994522..995295) 1 NC_004757.1 hypothetical protein 995295 1081853 NE0912 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840986.1 994522 R 228410 CDS NP_840987.1 30248917 1081854 995548..995889 1 NC_004757.1 BolA-like protein 995889 1081854 NE0913 Nitrosomonas europaea ATCC 19718 BolA-like protein NP_840987.1 995548 D 228410 CDS NP_840988.1 30248918 1081855 995942..996571 1 NC_004757.1 hypothetical protein 996571 1081855 NE0914 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840988.1 995942 D 228410 CDS NP_840989.1 30248919 1081856 996615..997457 1 NC_004757.1 hypothetical protein 997457 1081856 NE0915 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840989.1 996615 D 228410 CDS NP_840990.1 30248920 1081857 997469..997969 1 NC_004757.1 hypothetical protein 997969 1081857 NE0916 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840990.1 997469 D 228410 CDS NP_840991.1 30248921 1081858 998279..998779 1 NC_004757.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 998779 1081858 NE0917 Nitrosomonas europaea ATCC 19718 RNA polymerase factor sigma-70 NP_840991.1 998279 D 228410 CDS NP_840992.1 30248922 1081859 998776..999465 1 NC_004757.1 hypothetical protein 999465 1081859 NE0918 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840992.1 998776 D 228410 CDS NP_840993.1 30248923 1081860 999579..1001864 1 NC_004757.1 ABC transporter ATP-binding protein/permease 1001864 1081860 NE0919 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein/permease NP_840993.1 999579 D 228410 CDS NP_840994.1 30248924 1081861 1001861..1002328 1 NC_004757.1 hypothetical protein 1002328 1081861 NE0920 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840994.1 1001861 D 228410 CDS NP_840995.1 30248925 1081862 complement(1002360..1002710) 1 NC_004757.1 hypothetical protein 1002710 1081862 NE0921 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_840995.1 1002360 R 228410 CDS NP_840996.1 30248926 1081863 1003119..1005425 1 NC_004757.1 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 1005425 cphA 1081863 cphA Nitrosomonas europaea ATCC 19718 cyanophycin synthetase NP_840996.1 1003119 D 228410 CDS NP_840997.1 30248927 1081864 1005452..1008022 1 NC_004757.1 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 1008022 1081864 NE0923 Nitrosomonas europaea ATCC 19718 cyanophycin synthetase NP_840997.1 1005452 D 228410 CDS NP_840998.1 30248928 1081865 complement(1008210..1009139) 1 NC_004757.1 multicopper oxidase type 1 1009139 aniA 1081865 aniA Nitrosomonas europaea ATCC 19718 multicopper oxidase type 1 NP_840998.1 1008210 R 228410 CDS NP_840999.1 30248929 1081866 complement(1009158..1009553) 1 NC_004757.1 cytochrome c, class IC:cytochrome c, class I 1009553 1081866 NE0925 Nitrosomonas europaea ATCC 19718 cytochrome c, class IC:cytochrome c, class I NP_840999.1 1009158 R 228410 CDS NP_841000.1 30248930 1081867 complement(1009550..1010245) 1 NC_004757.1 cytochrome c, class I 1010245 1081867 NE0926 Nitrosomonas europaea ATCC 19718 cytochrome c, class I NP_841000.1 1009550 R 228410 CDS NP_841001.1 30248931 1081868 complement(1010277..1011368) 1 NC_004757.1 multicopper oxidase type 1 1011368 pan1 1081868 pan1 Nitrosomonas europaea ATCC 19718 multicopper oxidase type 1 NP_841001.1 1010277 R 228410 CDS NP_841002.1 30248932 1081869 1011569..1012024 1 NC_004757.1 hypothetical protein 1012024 yhdE 1081869 yhdE Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841002.1 1011569 D 228410 CDS NP_841003.1 30248933 1081870 complement(1012021..1015995) 1 NC_004757.1 signal peptide protein 1015995 1081870 NE0929 Nitrosomonas europaea ATCC 19718 signal peptide protein NP_841003.1 1012021 R 228410 CDS NP_841004.1 30248934 1081871 complement(1015997..1017757) 1 NC_004757.1 lipoprotein 1017757 1081871 NE0930 Nitrosomonas europaea ATCC 19718 lipoprotein NP_841004.1 1015997 R 228410 CDS NP_841005.1 30248935 1081872 1017952..1018605 1 NC_004757.1 hypothetical protein 1018605 1081872 NE0931 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841005.1 1017952 D 228410 CDS NP_841006.1 30248936 1081873 1018622..1018810 1 NC_004757.1 isomerase 1018810 1081873 NE0932 Nitrosomonas europaea ATCC 19718 isomerase NP_841006.1 1018622 D 228410 CDS NP_841007.1 30248937 1081874 1018826..1020640 1 NC_004757.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1020640 uvrC 1081874 uvrC Nitrosomonas europaea ATCC 19718 excinuclease ABC subunit C NP_841007.1 1018826 D 228410 CDS NP_841008.1 30248938 1081875 complement(1021050..1021358) 1 NC_004757.1 integrase catalytic subunit 1021358 1081875 NE0934 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841008.1 1021050 R 228410 CDS NP_841009.1 30248939 1081876 complement(1021355..1022083) 1 NC_004757.1 integrase catalytic subunit 1022083 1081876 NE0935 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841009.1 1021355 R 228410 CDS NP_841010.1 30248940 1081878 1023190..1023927 1 NC_004757.1 response regulator 1023927 1081878 NE0937 Nitrosomonas europaea ATCC 19718 response regulator NP_841010.1 1023190 D 228410 CDS NP_841011.1 30248941 1081879 1023924..1024496 1 NC_004757.1 hypothetical protein 1024496 1081879 NE0938 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841011.1 1023924 D 228410 CDS NP_841012.1 30248942 1081880 complement(1024553..1025596) 1 NC_004757.1 integrase catalytic subunit 1025596 1081880 NE0939 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841012.1 1024553 R 228410 CDS NP_841013.1 30248943 1081881 complement(1025874..1026236) 1 NC_004757.1 DNA transport competence protein, ComEA 1026236 1081881 NE0940 Nitrosomonas europaea ATCC 19718 DNA transport competence protein, ComEA NP_841013.1 1025874 R 228410 CDS NP_841014.1 30248944 1081882 complement(1026940..1027494) 1 NC_004757.1 hypothetical protein 1027494 1081882 NE0941 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841014.1 1026940 R 228410 CDS NP_841015.1 30248945 1081883 complement(1027579..1028214) 1 NC_004757.1 hypothetical protein 1028214 1081883 NE0942 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841015.1 1027579 R 228410 CDS NP_841016.1 30248946 1081884 complement(1028378..1029640) 1 NC_004757.1 similar to AMMONIA MONOOXYGENASE gb|AAA66195.1| (L08050) ammonia monooxygenase, 43 kDa subunit [Nitrosomonas europaea], evalue=0.00e+00, 95% identity; ammonia monooxygenase, 43 kDa subunit 1029640 amoB1 1081884 amoB1 Nitrosomonas europaea ATCC 19718 ammonia monooxygenase, 43 kDa subunit NP_841016.1 1028378 R 228410 CDS NP_841017.1 30248947 1081885 complement(1029642..1030472) 1 NC_004757.1 ammonia monooxygenase 1030472 amoA1 1081885 amoA1 Nitrosomonas europaea ATCC 19718 ammonia monooxygenase NP_841017.1 1029642 R 228410 CDS NP_841018.1 30248948 1081886 complement(1030636..1031451) 1 NC_004757.1 similar to (AB079055) ammonia monooxygenase subunit C2 [Nitrosomonas sp. ENI-11], evalue=1e-160, 95% identity; ammonia monooxygenase subunit C2 1031451 amoC1 1081886 amoC1 Nitrosomonas europaea ATCC 19718 ammonia monooxygenase subunit C2 NP_841018.1 1030636 R 228410 CDS NP_841019.1 30248949 1081887 1031893..1032912 1 NC_004757.1 Sua5/YciO/YrdC/YwlC family protein 1032912 1081887 NE0946 Nitrosomonas europaea ATCC 19718 Sua5/YciO/YrdC/YwlC family protein NP_841019.1 1031893 D 228410 CDS NP_841020.1 30248950 1081888 1032928..1033677 1 NC_004757.1 InterPro IPR001454 Haloacid dehalogenase/epoxide hydrolase family; COG0637 Predicted phosphatase/phosphohexomutase; hydrolase family protein 1033677 cbbY 1081888 cbbY Nitrosomonas europaea ATCC 19718 hydrolase family protein NP_841020.1 1032928 D 228410 CDS NP_841021.1 30248951 1081889 complement(1033717..1034691) 1 NC_004757.1 LysM domain-containing protein 1034691 1081889 NE0948 Nitrosomonas europaea ATCC 19718 LysM domain-containing protein NP_841021.1 1033717 R 228410 CDS NP_841022.1 30248952 1081890 complement(1034799..1035467) 1 NC_004757.1 pimt: protein-L-isoaspartate O-methyltransferase 1035467 1081890 NE0949 Nitrosomonas europaea ATCC 19718 pimt: protein-L-isoaspartate O-methyltransferase NP_841022.1 1034799 R 228410 CDS NP_841023.1 30248953 1081891 complement(1035582..1036325) 1 NC_004757.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1036325 surE 1081891 surE Nitrosomonas europaea ATCC 19718 stationary phase survival protein SurE NP_841023.1 1035582 R 228410 CDS NP_841024.1 30248954 1081893 complement(1036708..1037100) 1 NC_004757.1 MerR family transcriptional regulator 1037100 1081893 NE0951 Nitrosomonas europaea ATCC 19718 MerR family transcriptional regulator NP_841024.1 1036708 R 228410 CDS NP_841025.1 30248955 1081894 complement(1037078..1037386) 1 NC_004757.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1037386 ihfA 1081894 ihfA Nitrosomonas europaea ATCC 19718 integration host factor subunit alpha NP_841025.1 1037078 R 228410 CDS NP_841026.1 30248956 1081895 complement(1037437..1039803) 1 NC_004757.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1039803 pheT 1081895 pheT Nitrosomonas europaea ATCC 19718 phenylalanyl-tRNA synthetase subunit beta NP_841026.1 1037437 R 228410 CDS NP_841027.1 30248957 1081896 complement(1039822..1040859) 1 NC_004757.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1040859 pheS 1081896 pheS Nitrosomonas europaea ATCC 19718 phenylalanyl-tRNA synthetase subunit alpha NP_841027.1 1039822 R 228410 CDS NP_841028.1 30248958 1081897 complement(1040928..1041287) 1 NC_004757.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1041287 rplT 1081897 rplT Nitrosomonas europaea ATCC 19718 50S ribosomal protein L20 NP_841028.1 1040928 R 228410 CDS NP_841029.1 30248959 1081898 complement(1041299..1041496) 1 NC_004757.1 50S ribosomal protein L35 1041496 rpmI 1081898 rpmI Nitrosomonas europaea ATCC 19718 50S ribosomal protein L35 NP_841029.1 1041299 R 228410 CDS NP_841030.1 30248960 1081899 complement(1041621..1042115) 1 NC_004757.1 initiation factor 3 1042115 infC 1081899 infC Nitrosomonas europaea ATCC 19718 initiation factor 3 NP_841030.1 1041621 R 228410 CDS NP_841031.1 30248961 1081900 complement(1042241..1044148) 1 NC_004757.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1044148 thrS 1081900 thrS Nitrosomonas europaea ATCC 19718 threonyl-tRNA synthetase NP_841031.1 1042241 R 228410 CDS NP_841032.1 30248962 1081901 complement(1044459..1045160) 1 NC_004757.1 tetraheme c-cytochrome 1045160 cycX3 1081901 cycX3 Nitrosomonas europaea ATCC 19718 tetraheme c-cytochrome NP_841032.1 1044459 R 228410 CDS NP_841033.1 30248963 1081902 complement(1045163..1045870) 1 NC_004757.1 similar to Cytochrome c-554 precursor (C554) (Hydroxylamine oxidoreductase-linked cytochrome) pir||A59036 cytochrome c554, tetraheme, precursor - Nitrosomonas europaea; cytochrome c-554 1045870 cycA3 1081902 cycA3 Nitrosomonas europaea ATCC 19718 cytochrome c-554 NP_841033.1 1045163 R 228410 CDS NP_841034.1 30248964 1081903 complement(1045926..1047035) 1 NC_004757.1 hypothetical protein 1047035 1081903 NE0961 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841034.1 1045926 R 228410 CDS NP_841035.1 30248965 1081904 complement(1047032..1048744) 1 NC_004757.1 identical to (AB030386) hydroxylamine oxidoreductase [Nitrosomonas sp. ENI-11], evalue=0.00e+00, 100% identity; hydroxylamine oxidoreductase 1048744 hao2 1081904 hao2 Nitrosomonas europaea ATCC 19718 hydroxylamine oxidoreductase NP_841035.1 1047032 R 228410 CDS NP_841036.1 30248966 1081905 1049051..1050139 1 NC_004757.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1050139 mnmA 1081905 mnmA Nitrosomonas europaea ATCC 19718 tRNA-specific 2-thiouridylase MnmA NP_841036.1 1049051 D 228410 CDS NP_841037.1 30248967 1081906 complement(1050142..1051278) 1 NC_004757.1 type II secretion system protein E 1051278 pilU 1081906 pilU Nitrosomonas europaea ATCC 19718 type II secretion system protein E NP_841037.1 1050142 R 228410 CDS NP_841038.1 30248968 1081907 complement(1051295..1052338) 1 NC_004757.1 twitching mobility protein 1052338 pilT 1081907 pilT Nitrosomonas europaea ATCC 19718 twitching mobility protein NP_841038.1 1051295 R 228410 CDS NP_841039.1 30248969 1081908 1052535..1053251 1 NC_004757.1 hypothetical protein 1053251 1081908 NE0966 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841039.1 1052535 D 228410 CDS NP_841040.1 30248970 1081909 complement(1053220..1053489) 1 NC_004757.1 3Fe-4S ferredoxin 1053489 fdx1 1081909 fdx1 Nitrosomonas europaea ATCC 19718 3Fe-4S ferredoxin NP_841040.1 1053220 R 228410 CDS NP_841041.1 30248971 1081910 complement(1053509..1053988) 1 NC_004757.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1053988 coaD 1081910 coaD Nitrosomonas europaea ATCC 19718 phosphopantetheine adenylyltransferase NP_841041.1 1053509 R 228410 CDS NP_841042.1 30248972 1081911 complement(1053981..1054532) 1 NC_004757.1 N6-adenine-specific methylase 1054532 1081911 NE0969 Nitrosomonas europaea ATCC 19718 N6-adenine-specific methylase NP_841042.1 1053981 R 228410 CDS NP_841043.1 30248973 1081912 complement(1054542..1055846) 1 NC_004757.1 insulinase family protein 1055846 1081912 NE0970 Nitrosomonas europaea ATCC 19718 insulinase family protein NP_841043.1 1054542 R 228410 CDS NP_841044.1 30248974 1081913 1056001..1056420 1 NC_004757.1 hypothetical protein 1056420 phnB 1081913 phnB Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841044.1 1056001 D 228410 CDS NP_841045.1 30248975 1081914 1056451..1056849 1 NC_004757.1 hypothetical protein 1056849 1081914 NE0972 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841045.1 1056451 D 228410 CDS NP_841046.1 30248976 1081915 1057024..1057683 1 NC_004757.1 hypothetical protein 1057683 1081915 NE0973 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841046.1 1057024 D 228410 CDS NP_841047.1 30248977 1081916 complement(1057892..1058239) 1 NC_004757.1 PemK-like protein 1058239 1081916 NE0974 Nitrosomonas europaea ATCC 19718 PemK-like protein NP_841047.1 1057892 R 228410 CDS NP_841048.1 30248978 1081917 complement(1058239..1058484) 1 NC_004757.1 hypothetical protein 1058484 1081917 NE0975 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841048.1 1058239 R 228410 CDS NP_841049.1 30248979 1081918 complement(1058875..1060161) 1 NC_004757.1 nitrate transport system ATP-binding protein 1060161 1081918 NE0976 Nitrosomonas europaea ATCC 19718 nitrate transport system ATP-binding protein NP_841049.1 1058875 R 228410 CDS NP_841050.1 30248980 1081919 complement(1060189..1061931) 1 NC_004757.1 nitrate transport system permease 1061931 1081919 NE0977 Nitrosomonas europaea ATCC 19718 nitrate transport system permease NP_841050.1 1060189 R 228410 CDS NP_841051.1 30248981 1081920 complement(1062258..1064669) 1 NC_004757.1 TonB-dependent receptor protein 1064669 1081920 NE0978 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841051.1 1062258 R 228410 CDS NP_841052.1 30248982 1081921 complement(1064834..1065877) 1 NC_004757.1 transmembrane sensor 1065877 1081921 NE0979 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_841052.1 1064834 R 228410 CDS NP_841053.1 30248983 1081922 complement(1065883..1066386) 1 NC_004757.1 RNA polymerase ECF-subfamily sigma-70 factor 1066386 1081922 NE0980 Nitrosomonas europaea ATCC 19718 RNA polymerase ECF-subfamily sigma-70 factor NP_841053.1 1065883 R 228410 CDS NP_841054.1 30248984 1081923 complement(1066782..1067399) 1 NC_004757.1 HhH-GPD 1067399 1081923 NE0981 Nitrosomonas europaea ATCC 19718 HhH-GPD NP_841054.1 1066782 R 228410 CDS NP_841055.1 30248985 1081924 1067680..1068126 1 NC_004757.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1068126 1081924 NE0982 Nitrosomonas europaea ATCC 19718 cell division protein MraZ NP_841055.1 1067680 D 228410 CDS NP_841056.1 30248986 1081925 1068142..1069095 1 NC_004757.1 S-adenosyl-methyltransferase MraW 1069095 mraW 1081925 mraW Nitrosomonas europaea ATCC 19718 S-adenosyl-methyltransferase MraW NP_841056.1 1068142 D 228410 CDS NP_841057.1 30248987 1081926 1069092..1069382 1 NC_004757.1 cell division ftsL transmembrane protein 1069382 ftsL 1081926 ftsL Nitrosomonas europaea ATCC 19718 cell division ftsL transmembrane protein NP_841057.1 1069092 D 228410 CDS NP_841058.1 30248988 1081927 1069379..1071121 1 NC_004757.1 penicillin binding protein transpeptidase domain-containing protein 1071121 ftsI 1081927 ftsI Nitrosomonas europaea ATCC 19718 penicillin binding protein transpeptidase domain-containing protein NP_841058.1 1069379 D 228410 CDS NP_841059.1 30248989 1081928 1071118..1072683 1 NC_004757.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1072683 murE 1081928 murE Nitrosomonas europaea ATCC 19718 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase NP_841059.1 1071118 D 228410 CDS NP_841060.1 30248990 1081929 1072680..1074038 1 NC_004757.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase protein 1074038 murF 1081929 murF Nitrosomonas europaea ATCC 19718 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase protein NP_841060.1 1072680 D 228410 CDS NP_841061.1 30248991 1081930 1074125..1075210 1 NC_004757.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1075210 mraY 1081930 mraY Nitrosomonas europaea ATCC 19718 phospho-N-acetylmuramoyl-pentapeptide- transferase NP_841061.1 1074125 D 228410 CDS NP_841062.1 30248992 1081931 1075207..1076622 1 NC_004757.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1076622 murD 1081931 murD Nitrosomonas europaea ATCC 19718 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase NP_841062.1 1075207 D 228410 CDS NP_841063.1 30248993 1081932 1076627..1077793 1 NC_004757.1 cell cycle proteins 1077793 ftsW 1081932 ftsW Nitrosomonas europaea ATCC 19718 cell cycle proteins NP_841063.1 1076627 D 228410 CDS NP_841064.1 30248994 1081933 1077858..1078931 1 NC_004757.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1078931 murG 1081933 murG Nitrosomonas europaea ATCC 19718 UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase NP_841064.1 1077858 D 228410 CDS NP_841065.1 30248995 1081934 1078921..1080342 1 NC_004757.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1080342 murC 1081934 murC Nitrosomonas europaea ATCC 19718 UDP-N-acetylmuramate--L-alanine ligase NP_841065.1 1078921 D 228410 CDS NP_841066.1 30248996 1081935 1080353..1081348 1 NC_004757.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1081348 murB 1081935 murB Nitrosomonas europaea ATCC 19718 UDP-N-acetylenolpyruvoylglucosamine reductase NP_841066.1 1080353 D 228410 CDS NP_841067.1 30248997 1081936 1081345..1082262 1 NC_004757.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 1082262 ddl 1081936 ddl Nitrosomonas europaea ATCC 19718 D-alanine--D-alanine ligase NP_841067.1 1081345 D 228410 CDS NP_841068.1 30248998 1081937 1082349..1083140 1 NC_004757.1 cell division transmembrane protein 1083140 ftsQ 1081937 ftsQ Nitrosomonas europaea ATCC 19718 cell division transmembrane protein NP_841068.1 1082349 D 228410 CDS NP_841069.1 30248999 1081938 1083137..1084375 1 NC_004757.1 cell division protein FtsA 1084375 ftsA 1081938 ftsA Nitrosomonas europaea ATCC 19718 cell division protein FtsA NP_841069.1 1083137 D 228410 CDS NP_841070.1 30249000 1081939 1084445..1085593 1 NC_004757.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1085593 ftsZ 1081939 ftsZ Nitrosomonas europaea ATCC 19718 cell division protein FtsZ NP_841070.1 1084445 D 228410 CDS NP_841071.1 30249001 1081940 complement(1085754..1085996) 1 NC_004757.1 hypothetical protein 1085996 1081940 NE0998 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841071.1 1085754 R 228410 CDS NP_841072.1 30249002 1081941 1086200..1087129 1 NC_004757.1 phosphate transport system permease protein 1087129 1081941 NE0999 Nitrosomonas europaea ATCC 19718 phosphate transport system permease protein NP_841072.1 1086200 D 228410 CDS NP_841073.1 30249003 1081942 1087135..1088070 1 NC_004757.1 phosphate permease component of ATP-dependent phosphate uptake system 1088070 1081942 NE1000 Nitrosomonas europaea ATCC 19718 phosphate permease component of ATP-dependent phosphate uptake system NP_841073.1 1087135 D 228410 CDS NP_841074.1 30249004 1081943 1088080..1088880 1 NC_004757.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 1088880 pstB 1081943 pstB Nitrosomonas europaea ATCC 19718 phosphate ABC transporter ATP-binding protein NP_841074.1 1088080 D 228410 CDS NP_841075.1 30249005 1081944 complement(1089057..1091903) 1 NC_004757.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1091903 acnA1 1081944 acnA1 Nitrosomonas europaea ATCC 19718 aconitate hydratase NP_841075.1 1089057 R 228410 CDS NP_841076.1 30249006 1081945 1092047..1092952 1 NC_004757.1 aldose 1-epimerase 1092952 1081945 NE1003 Nitrosomonas europaea ATCC 19718 aldose 1-epimerase NP_841076.1 1092047 D 228410 CDS NP_841077.1 30249007 1081946 1092993..1093550 1 NC_004757.1 hypothetical protein 1093550 1081946 NE1004 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841077.1 1092993 D 228410 CDS NP_841078.1 30249008 1081947 complement(1093776..1094663) 1 NC_004757.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 1094663 argB 1081947 argB Nitrosomonas europaea ATCC 19718 acetylglutamate kinase NP_841078.1 1093776 R 228410 CDS NP_841079.1 30249009 1081948 complement(1094754..1095266) 1 NC_004757.1 chemotaxis protein CheW 1095266 pilI 1081948 pilI Nitrosomonas europaea ATCC 19718 chemotaxis protein CheW NP_841079.1 1094754 R 228410 CDS NP_841080.1 30249010 1081949 complement(1095273..1095638) 1 NC_004757.1 response regulator receiver domain-containing protein 1095638 pilH 1081949 pilH Nitrosomonas europaea ATCC 19718 response regulator receiver domain-containing protein NP_841080.1 1095273 R 228410 CDS NP_841081.1 30249011 1081950 1095933..1096517 1 NC_004757.1 hypothetical protein 1096517 1081950 NE1008 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841081.1 1095933 D 228410 CDS NP_841082.1 30249012 1081951 1096562..1097929 1 NC_004757.1 D-lactate dehydrogenase 1097929 1081951 NE1009 Nitrosomonas europaea ATCC 19718 D-lactate dehydrogenase NP_841082.1 1096562 D 228410 CDS NP_841083.1 30249013 1081952 complement(1098002..1098898) 1 NC_004757.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1098898 ctaB 1081952 ctaB Nitrosomonas europaea ATCC 19718 protoheme IX farnesyltransferase NP_841083.1 1098002 R 228410 CDS NP_841084.1 30249014 1081953 complement(1099007..1099588) 1 NC_004757.1 transmembrane protein 1099588 1081953 NE1011 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841084.1 1099007 R 228410 CDS NP_841085.1 30249015 1081954 complement(1099563..1100282) 1 NC_004757.1 SURF1 family protein 1100282 1081954 NE1012 Nitrosomonas europaea ATCC 19718 SURF1 family protein NP_841085.1 1099563 R 228410 CDS NP_841086.1 30249016 1081955 complement(1100390..1101235) 1 NC_004757.1 cytochrome c oxidase subunit III 1101235 coxC 1081955 coxC Nitrosomonas europaea ATCC 19718 cytochrome c oxidase subunit III NP_841086.1 1100390 R 228410 CDS NP_841087.1 30249017 1081956 complement(1101260..1101502) 1 NC_004757.1 transmembrane protein 1101502 1081956 NE1014 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841087.1 1101260 R 228410 CDS NP_841088.1 30249018 1081957 complement(1101508..1102032) 1 NC_004757.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 1102032 ctaG 1081957 ctaG Nitrosomonas europaea ATCC 19718 cytochrome C oxidase assembly protein NP_841088.1 1101508 R 228410 CDS NP_841089.1 30249019 1081958 complement(1102158..1103735) 1 NC_004757.1 cytochrome c oxidase subunit I 1103735 coxA 1081958 coxA Nitrosomonas europaea ATCC 19718 cytochrome c oxidase subunit I NP_841089.1 1102158 R 228410 CDS NP_841090.1 30249020 1081959 complement(1103790..1104632) 1 NC_004757.1 cytochrome C oxidase polypeptide II (cytochrome AA3 subunit 2) transmembrane protein CoxB 1104632 coxB 1081959 coxB Nitrosomonas europaea ATCC 19718 cytochrome C oxidase polypeptide II (cytochrome AA3 subunit 2) transmembrane protein CoxB NP_841090.1 1103790 R 228410 CDS NP_841091.1 30249021 1081960 1105100..1105795 1 NC_004757.1 hypothetical protein 1105795 1081960 NE1018 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841091.1 1105100 D 228410 CDS NP_841092.1 30249022 1081961 1105866..1108214 1 NC_004757.1 copA; copper-transporting ATPase 1108214 copA 1081961 copA Nitrosomonas europaea ATCC 19718 copA; copper-transporting ATPase NP_841092.1 1105866 D 228410 CDS NP_841093.1 30249023 1081962 1108201..1108455 1 NC_004757.1 heavy metal-binding domain-containing protein 1108455 1081962 NE1020 Nitrosomonas europaea ATCC 19718 heavy metal-binding domain-containing protein NP_841093.1 1108201 D 228410 CDS NP_841094.1 30249024 1081963 1108610..1109578 1 NC_004757.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1109578 accA 1081963 accA Nitrosomonas europaea ATCC 19718 acetyl-CoA carboxylase carboxyltransferase subunit alpha NP_841094.1 1108610 D 228410 CDS NP_841095.1 30249025 1081964 1109547..1110923 1 NC_004757.1 hypothetical protein 1110923 1081964 NE1022 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841095.1 1109547 D 228410 CDS NP_841096.1 30249026 1081965 1110979..1111893 1 NC_004757.1 dTDP-4-dehydrorhamnose reductase 1111893 rfbD 1081965 rfbD Nitrosomonas europaea ATCC 19718 dTDP-4-dehydrorhamnose reductase NP_841096.1 1110979 D 228410 CDS NP_841097.1 30249027 1081966 complement(1111913..1112866) 1 NC_004757.1 U7 family peptidase 1112866 1081966 NE1024 Nitrosomonas europaea ATCC 19718 U7 family peptidase NP_841097.1 1111913 R 228410 CDS NP_841098.1 30249028 1081967 complement(1112895..1113557) 1 NC_004757.1 outer membrane protein 1113557 1081967 NE1025 Nitrosomonas europaea ATCC 19718 outer membrane protein NP_841098.1 1112895 R 228410 CDS NP_841099.1 30249029 1081968 complement(1113712..1114545) 1 NC_004757.1 hypothetical protein 1114545 1081968 NE1026 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841099.1 1113712 R 228410 CDS NP_841100.1 30249030 1081969 1114709..1115584 1 NC_004757.1 esterase/lipase/thioesterase family protein 1115584 1081969 NE1027 Nitrosomonas europaea ATCC 19718 esterase/lipase/thioesterase family protein NP_841100.1 1114709 D 228410 CDS NP_841101.1 30249031 1081970 1115622..1116068 1 NC_004757.1 universal stress protein 1116068 1081970 NE1028 Nitrosomonas europaea ATCC 19718 universal stress protein NP_841101.1 1115622 D 228410 CDS NP_841102.1 30249032 1081971 1116258..1117289 1 NC_004757.1 solute-binding family 1 protein 1117289 1081971 NE1029 Nitrosomonas europaea ATCC 19718 solute-binding family 1 protein NP_841102.1 1116258 D 228410 CDS NP_841103.1 30249033 1081972 1117425..1118984 1 NC_004757.1 iron transport system permease 1118984 1081972 NE1030 Nitrosomonas europaea ATCC 19718 iron transport system permease NP_841103.1 1117425 D 228410 CDS NP_841104.1 30249034 1081973 1118992..1120062 1 NC_004757.1 iron transport system ATP-binding protein 1120062 1081973 NE1031 Nitrosomonas europaea ATCC 19718 iron transport system ATP-binding protein NP_841104.1 1118992 D 228410 CDS NP_841105.1 30249035 1081974 1120085..1120405 1 NC_004757.1 hypothetical protein 1120405 1081974 NE1032 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841105.1 1120085 D 228410 CDS NP_841106.1 30249036 1081975 complement(1120428..1121486) 1 NC_004757.1 membrane-bound lytic transglycosylase 1121486 mltB2 1081975 mltB2 Nitrosomonas europaea ATCC 19718 membrane-bound lytic transglycosylase NP_841106.1 1120428 R 228410 CDS NP_841107.1 30249037 1081976 1122055..1122381 1 NC_004757.1 thioredoxin 1122381 trxA 1081976 trxA Nitrosomonas europaea ATCC 19718 thioredoxin NP_841107.1 1122055 D 228410 CDS NP_841108.1 30249038 1081977 1122604..1123863 1 NC_004757.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1123863 rho 1081977 rho Nitrosomonas europaea ATCC 19718 transcription termination factor Rho NP_841108.1 1122604 D 228410 CDS NP_841109.1 30249039 1081978 1124143..1124367 1 NC_004757.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1124367 rpmE 1081978 rpmE Nitrosomonas europaea ATCC 19718 50S ribosomal protein L31 NP_841109.1 1124143 D 228410 CDS NP_841110.1 30249040 1081983 complement(1128429..1128902) 1 NC_004757.1 ECF subfamily RNA polymerase sigma-70 factor 1128902 1081983 NE1041 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma-70 factor NP_841110.1 1128429 R 228410 CDS NP_841111.1 30249041 1081984 complement(1129202..1129444) 1 NC_004757.1 hypothetical protein 1129444 1081984 NE1042 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841111.1 1129202 R 228410 CDS NP_841112.1 30249042 1081985 complement(1129516..1129797) 1 NC_004757.1 transmembrane protein 1129797 1081985 NE1043 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841112.1 1129516 R 228410 CDS NP_841113.1 30249043 1081986 complement(1129794..1131080) 1 NC_004757.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1131080 eno 1081986 eno Nitrosomonas europaea ATCC 19718 phosphopyruvate hydratase NP_841113.1 1129794 R 228410 CDS NP_841114.1 30249044 1081987 complement(1131521..1133215) 1 NC_004757.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1133215 pyrG 1081987 pyrG Nitrosomonas europaea ATCC 19718 CTP synthetase NP_841114.1 1131521 R 228410 CDS NP_841115.1 30249045 1081988 1133399..1133791 1 NC_004757.1 succinate dehydrogenase, cytochrome b subunit 1133791 1081988 NE1046 Nitrosomonas europaea ATCC 19718 succinate dehydrogenase, cytochrome b subunit NP_841115.1 1133399 D 228410 CDS NP_841116.1 30249046 1081989 1133785..1134138 1 NC_004757.1 succinate dehydrogenase, cytochrome b subunit 1134138 sdhD 1081989 sdhD Nitrosomonas europaea ATCC 19718 succinate dehydrogenase, cytochrome b subunit NP_841116.1 1133785 D 228410 CDS NP_841117.1 30249047 1081990 1134140..1135903 1 NC_004757.1 succinate dehydrogenase/fumarate reductase, flavoprotein subunits 1135903 sdhA 1081990 sdhA Nitrosomonas europaea ATCC 19718 succinate dehydrogenase/fumarate reductase, flavoprotein subunits NP_841117.1 1134140 D 228410 CDS NP_841118.1 30249048 1081991 1135985..1136959 1 NC_004757.1 ankyrin repeat-containing protein 1136959 1081991 NE1049 Nitrosomonas europaea ATCC 19718 ankyrin repeat-containing protein NP_841118.1 1135985 D 228410 CDS NP_841119.1 30249049 1081992 1136931..1137185 1 NC_004757.1 hypothetical protein 1137185 1081992 NE1050 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841119.1 1136931 D 228410 CDS NP_841120.1 30249050 1081993 1137182..1139485 1 NC_004757.1 FtsK/SpoIIIE family protein 1139485 ftsK 1081993 ftsK Nitrosomonas europaea ATCC 19718 FtsK/SpoIIIE family protein NP_841120.1 1137182 D 228410 CDS NP_841121.1 30249051 1081994 1139545..1140165 1 NC_004757.1 Outer membrane lipoprotein carrier protein LolA 1140165 1081994 NE1052 Nitrosomonas europaea ATCC 19718 Outer membrane lipoprotein carrier protein LolA NP_841121.1 1139545 D 228410 CDS NP_841122.1 30249052 1081995 1140158..1141477 1 NC_004757.1 recombination factor protein RarA 1141477 1081995 NE1053 Nitrosomonas europaea ATCC 19718 recombination factor protein RarA NP_841122.1 1140158 D 228410 CDS NP_841123.1 30249053 1081996 1141610..1143109 1 NC_004757.1 alginate O-acetylation protein 1143109 algI 1081996 algI Nitrosomonas europaea ATCC 19718 alginate O-acetylation protein NP_841123.1 1141610 D 228410 CDS NP_841124.1 30249054 1081997 1143106..1144644 1 NC_004757.1 hypothetical protein 1144644 1081997 NE1055 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841124.1 1143106 D 228410 CDS NP_841125.1 30249055 1081998 complement(1144671..1145345) 1 NC_004757.1 lolD; lipoprotein releasing system ATP-binding ABC transporter 1145345 lolD 1081998 lolD Nitrosomonas europaea ATCC 19718 lolD; lipoprotein releasing system ATP-binding ABC transporter NP_841125.1 1144671 R 228410 CDS NP_841126.1 30249056 1081999 complement(1145338..1146585) 1 NC_004757.1 hypothetical protein 1146585 1081999 NE1057 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841126.1 1145338 R 228410 CDS NP_841127.1 30249057 1082000 complement(1146719..1147771) 1 NC_004757.1 hypothetical protein 1147771 1082000 NE1058 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841127.1 1146719 R 228410 CDS NP_841128.1 30249058 1082001 1148265..1149236 1 NC_004757.1 urea transporter 1149236 1082001 NE1059 Nitrosomonas europaea ATCC 19718 urea transporter NP_841128.1 1148265 D 228410 CDS NP_841129.1 30249059 1082003 complement(1150861..1151811) 1 NC_004757.1 integrase catalytic subunit 1151811 1082003 NE1061 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841129.1 1150861 R 228410 CDS NP_841130.1 30249060 1082006 complement(1154443..1154874) 1 NC_004757.1 PilT domain-containing protein 1154874 1082006 NE1064 Nitrosomonas europaea ATCC 19718 PilT domain-containing protein NP_841130.1 1154443 R 228410 CDS NP_841131.1 30249061 1082007 complement(1154871..1155119) 1 NC_004757.1 plasmid stability protein 1155119 1082007 NE1065 Nitrosomonas europaea ATCC 19718 plasmid stability protein NP_841131.1 1154871 R 228410 CDS NP_841132.1 30249062 1082008 1155365..1155622 1 NC_004757.1 hypothetical protein 1155622 1082008 NE1066 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841132.1 1155365 D 228410 CDS NP_841133.1 30249063 1082009 1155808..1156071 1 NC_004757.1 plasmid stability-like protein 1156071 1082009 NE1067 Nitrosomonas europaea ATCC 19718 plasmid stability-like protein NP_841133.1 1155808 D 228410 CDS NP_841134.1 30249064 1082012 complement(1157077..1158045) 1 NC_004757.1 transmembrane sensor 1158045 1082012 NE1070 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_841134.1 1157077 R 228410 CDS NP_841135.1 30249065 1082013 complement(1158053..1158589) 1 NC_004757.1 ECF subfamily RNA polymerase sigma-70 factor 1158589 1082013 NE1071 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma-70 factor NP_841135.1 1158053 R 228410 CDS NP_841136.1 30249066 1082014 complement(1158860..1161214) 1 NC_004757.1 TonB-dependent receptor protein 1161214 1082014 NE1072 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841136.1 1158860 R 228410 CDS NP_841137.1 30249067 1082016 complement(1161954..1162331) 1 NC_004757.1 hypothetical protein 1162331 1082016 NE1074 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841137.1 1161954 R 228410 CDS NP_841138.1 30249068 1082017 complement(1162328..1162618) 1 NC_004757.1 DNA polymerase beta-like protein 1162618 1082017 NE1075 Nitrosomonas europaea ATCC 19718 DNA polymerase beta-like protein NP_841138.1 1162328 R 228410 CDS NP_841139.1 30249069 1082018 complement(1162704..1163021) 1 NC_004757.1 CcdB-like protein 1163021 1082018 NE1076 Nitrosomonas europaea ATCC 19718 CcdB-like protein NP_841139.1 1162704 R 228410 CDS NP_841140.1 30249070 1082019 complement(1163165..1163428) 1 NC_004757.1 hypothetical protein 1163428 1082019 NE1077 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841140.1 1163165 R 228410 CDS NP_841141.1 30249071 1082020 complement(1163597..1164640) 1 NC_004757.1 transmembrane sensor 1164640 1082020 NE1078 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_841141.1 1163597 R 228410 CDS NP_841142.1 30249072 1082021 complement(1164645..1165163) 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 1165163 1082021 NE1079 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_841142.1 1164645 R 228410 CDS NP_841143.1 30249073 1082022 complement(1165270..1166652) 1 NC_004757.1 Outer membrane efflux protein 1166652 1082022 NE1080 Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_841143.1 1165270 R 228410 CDS NP_841144.1 30249074 1082023 complement(1166661..1168640) 1 NC_004757.1 ABC transporter ATP-binding protein/permease 1168640 1082023 NE1081 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein/permease NP_841144.1 1166661 R 228410 CDS NP_841145.1 30249075 1082024 complement(1168634..1169830) 1 NC_004757.1 hypothetical protein 1169830 1082024 NE1082 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841145.1 1168634 R 228410 CDS NP_841146.1 30249076 1082025 complement(1169990..1170334) 1 NC_004757.1 hypothetical protein 1170334 1082025 NE1083 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841146.1 1169990 R 228410 CDS NP_841147.1 30249077 1082026 complement(1170336..1172282) 1 NC_004757.1 hypothetical protein 1172282 1082026 NE1084 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841147.1 1170336 R 228410 CDS NP_841148.1 30249078 1082027 complement(1172382..1173395) 1 NC_004757.1 transmembrane sensor 1173395 1082027 NE1085 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_841148.1 1172382 R 228410 CDS NP_841149.1 30249079 1082028 complement(1173454..1173966) 1 NC_004757.1 ECF subfamily RNA polymerase sigma-70 factor 1173966 1082028 NE1086 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma-70 factor NP_841149.1 1173454 R 228410 CDS NP_841150.1 30249080 1082029 complement(1174250..1176751) 1 NC_004757.1 TonB-dependent receptor protein 1176751 fpvA 1082029 fpvA Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841150.1 1174250 R 228410 CDS NP_841151.1 30249081 1082030 complement(1176954..1179407) 1 NC_004757.1 TonB-dependent receptor protein 1179407 1082030 NE1088 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841151.1 1176954 R 228410 CDS NP_841152.1 30249082 1082031 complement(1179531..1181726) 1 NC_004757.1 TonB-dependent receptor protein 1181726 1082031 NE1089 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841152.1 1179531 R 228410 CDS NP_841153.1 30249083 1082032 complement(1182090..1182356) 1 NC_004757.1 hypothetical protein 1182356 1082032 NE1090 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841153.1 1182090 R 228410 CDS NP_841154.1 30249084 1082033 complement(1182424..1182879) 1 NC_004757.1 hypothetical protein 1182879 1082033 NE1091 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841154.1 1182424 R 228410 CDS NP_841155.1 30249085 1082035 1184950..1186473 1 NC_004757.1 IS4 family transposase 1186473 1082035 NE1093 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_841155.1 1184950 D 228410 CDS NP_841156.1 30249086 1082037 complement(1187647..1188678) 1 NC_004757.1 transmembrane sensor 1188678 1082037 NE1095 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_841156.1 1187647 R 228410 CDS NP_841157.1 30249087 1082038 complement(1188693..1189208) 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 1189208 1082038 NE1096 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_841157.1 1188693 R 228410 CDS NP_841158.1 30249088 1082039 complement(1189452..1191926) 1 NC_004757.1 TonB-dependent receptor protein 1191926 1082039 NE1097 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841158.1 1189452 R 228410 CDS NP_841159.1 30249089 1082040 complement(1192020..1193006) 1 NC_004757.1 transmembrane sensor 1193006 1082040 NE1098 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_841159.1 1192020 R 228410 CDS NP_841160.1 30249090 1082041 complement(1193020..1193523) 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 1193523 1082041 NE1099 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_841160.1 1193020 R 228410 CDS NP_841161.1 30249091 1082042 1193723..1193995 1 NC_004757.1 hypothetical protein 1193995 1082042 NE1100 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841161.1 1193723 D 228410 CDS NP_841162.1 30249092 1082043 1194076..1194585 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 1194585 1082043 NE1101 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_841162.1 1194076 D 228410 CDS NP_841163.1 30249093 1082044 1194610..1195668 1 NC_004757.1 transmembrane sensor 1195668 1082044 NE1102 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_841163.1 1194610 D 228410 CDS NP_841164.1 30249094 1082045 complement(1195700..1196194) 1 NC_004757.1 N-acetyltransferase GCN5 1196194 1082045 NE1103 Nitrosomonas europaea ATCC 19718 N-acetyltransferase GCN5 NP_841164.1 1195700 R 228410 CDS NP_841165.1 30249095 1082046 complement(1196191..1196463) 1 NC_004757.1 hypothetical protein 1196463 1082046 NE1104 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841165.1 1196191 R 228410 CDS NP_841166.1 30249096 1082048 1198601..1199008 1 NC_004757.1 transposase 1199008 1082048 NE1106 Nitrosomonas europaea ATCC 19718 transposase NP_841166.1 1198601 D 228410 CDS NP_841167.1 30249097 1082049 1199008..1199376 1 NC_004757.1 IS4 family transposase 1199376 1082049 NE1107 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_841167.1 1199008 D 228410 CDS NP_841168.1 30249098 1082051 1200249..1200530 1 NC_004757.1 hypothetical protein 1200530 1082051 NE1109 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841168.1 1200249 D 228410 CDS NP_841169.1 30249099 1082052 1200543..1200899 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 1200899 1082052 NE1110 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_841169.1 1200543 D 228410 CDS NP_841170.1 30249100 1082053 complement(1200892..1202304) 1 NC_004757.1 Outer membrane efflux protein 1202304 1082053 NE1111 Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_841170.1 1200892 R 228410 CDS NP_841171.1 30249101 1082054 complement(1202320..1205421) 1 NC_004757.1 MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; multidrug efflux protein 1205421 1082054 NE1112 Nitrosomonas europaea ATCC 19718 multidrug efflux protein NP_841171.1 1202320 R 228410 CDS NP_841172.1 30249102 1082055 complement(1205440..1206600) 1 NC_004757.1 MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; periplasmic multidrug efflux lipoprotein 1206600 1082055 NE1113 Nitrosomonas europaea ATCC 19718 periplasmic multidrug efflux lipoprotein NP_841172.1 1205440 R 228410 CDS NP_841173.1 30249103 1082056 1206752..1207366 1 NC_004757.1 TetR family regulatory protein 1207366 1082056 NE1114 Nitrosomonas europaea ATCC 19718 TetR family regulatory protein NP_841173.1 1206752 D 228410 CDS NP_841174.1 30249104 1082057 1207446..1208876 1 NC_004757.1 Outer membrane efflux protein 1208876 oprN 1082057 oprN Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_841174.1 1207446 D 228410 CDS NP_841175.1 30249105 1082058 1208873..1209943 1 NC_004757.1 Type I antifreeze protein:hemolysin D 1209943 1082058 NE1116 Nitrosomonas europaea ATCC 19718 Type I antifreeze protein:hemolysin D NP_841175.1 1208873 D 228410 CDS NP_841176.1 30249106 1082059 1209940..1212711 1 NC_004757.1 multidrug ABC transporter ATPase 1212711 yhiH 1082059 yhiH Nitrosomonas europaea ATCC 19718 multidrug ABC transporter ATPase NP_841176.1 1209940 D 228410 CDS NP_841177.1 30249107 1082060 1212714..1213838 1 NC_004757.1 ABC transporter permease 1213838 1082060 NE1118 Nitrosomonas europaea ATCC 19718 ABC transporter permease NP_841177.1 1212714 D 228410 CDS NP_841178.1 30249108 1082061 complement(1213986..1214288) 1 NC_004757.1 hypothetical protein 1214288 1082061 NE1119 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841178.1 1213986 R 228410 CDS NP_841179.1 30249109 1082062 complement(1214337..1214504) 1 NC_004757.1 hypothetical protein 1214504 1082062 NE1120 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841179.1 1214337 R 228410 CDS NP_841180.1 30249110 1082063 complement(1214540..1214827) 1 NC_004757.1 hypothetical protein 1214827 1082063 NE1121 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841180.1 1214540 R 228410 CDS NP_841181.1 30249111 1082064 complement(1215138..1215743) 1 NC_004757.1 hypothetical protein 1215743 1082064 NE1122 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841181.1 1215138 R 228410 CDS NP_841182.1 30249112 1082065 1216196..1218577 1 NC_004757.1 penicillin amidase 1218577 1082065 NE1123 Nitrosomonas europaea ATCC 19718 penicillin amidase NP_841182.1 1216196 D 228410 CDS NP_841183.1 30249113 1082066 1218822..1220180 1 NC_004757.1 similar to (NC_000919) response regulatory protein (atoC) [Treponema pallidum], evalue=2.00e-86, 39% identity; atoC; response regulatory protein 1220180 1082066 NE1124 Nitrosomonas europaea ATCC 19718 atoC; response regulatory protein NP_841183.1 1218822 D 228410 CDS NP_841184.1 30249114 1082067 1220223..1221806 1 NC_004757.1 AMP-dependent synthetase and ligase 1221806 fadD 1082067 fadD Nitrosomonas europaea ATCC 19718 AMP-dependent synthetase and ligase NP_841184.1 1220223 D 228410 CDS NP_841185.1 30249115 1082068 1221803..1223032 1 NC_004757.1 Orn/DAP/Arg decarboxylase family protein 1223032 1082068 NE1126 Nitrosomonas europaea ATCC 19718 Orn/DAP/Arg decarboxylase family protein NP_841185.1 1221803 D 228410 CDS NP_841186.1 30249116 1082069 1223233..1225092 1 NC_004757.1 asparagine synthase 1225092 asnB 1082069 asnB Nitrosomonas europaea ATCC 19718 asparagine synthase NP_841186.1 1223233 D 228410 CDS NP_841187.1 30249117 1082070 1225466..1226257 1 NC_004757.1 hypothetical protein 1226257 1082070 NE1128 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841187.1 1225466 D 228410 CDS NP_841188.1 30249118 1082071 1226288..1226740 1 NC_004757.1 hypothetical protein 1226740 1082071 NE1129 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841188.1 1226288 D 228410 CDS NP_841189.1 30249119 1082072 1226733..1227968 1 NC_004757.1 hypothetical protein 1227968 1082072 NE1130 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841189.1 1226733 D 228410 CDS NP_841190.1 30249120 1082074 complement(1230529..1230879) 1 NC_004757.1 transposase 1230879 1082074 NE1132 Nitrosomonas europaea ATCC 19718 transposase NP_841190.1 1230529 R 228410 CDS NP_841191.1 30249121 1082075 complement(1230924..1231409) 1 NC_004757.1 similar to (U83995) protease [Porphyromonas gingivalis], evalue=2.00e-22, 40% identity; protease 1231409 1082075 NE1133 Nitrosomonas europaea ATCC 19718 protease NP_841191.1 1230924 R 228410 CDS NP_841192.1 30249122 1082077 1231920..1232168 1 NC_004757.1 hypothetical protein 1232168 1082077 NE1135 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841192.1 1231920 D 228410 CDS NP_841193.1 30249123 1082078 complement(1232310..1232726) 1 NC_004757.1 hypothetical protein 1232726 1082078 NE1136 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841193.1 1232310 R 228410 CDS NP_841194.1 30249124 1082079 complement(1232727..1233797) 1 NC_004757.1 DNA polymerase III subunit delta 1233797 holA 1082079 holA Nitrosomonas europaea ATCC 19718 DNA polymerase III subunit delta NP_841194.1 1232727 R 228410 CDS NP_841195.1 30249125 1082080 complement(1233809..1234306) 1 NC_004757.1 lipoprotein B transmembrane 1234306 rlpB 1082080 rlpB Nitrosomonas europaea ATCC 19718 lipoprotein B transmembrane NP_841195.1 1233809 R 228410 CDS NP_841196.1 30249126 1082081 complement(1234324..1236933) 1 NC_004757.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1236933 leuS 1082081 leuS Nitrosomonas europaea ATCC 19718 leucyl-tRNA synthetase NP_841196.1 1234324 R 228410 CDS NP_841197.1 30249127 1082082 1237156..1238217 1 NC_004757.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1238217 queA 1082082 queA Nitrosomonas europaea ATCC 19718 S-adenosylmethionine--tRNA ribosyltransferase-isomerase NP_841197.1 1237156 D 228410 CDS NP_841198.1 30249128 1082083 1238214..1239329 1 NC_004757.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1239329 tgt 1082083 tgt Nitrosomonas europaea ATCC 19718 queuine tRNA-ribosyltransferase NP_841198.1 1238214 D 228410 CDS NP_841199.1 30249129 1082084 1239364..1239840 1 NC_004757.1 hypothetical protein 1239840 1082084 NE1142 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841199.1 1239364 D 228410 CDS NP_841200.1 30249130 1082085 1239915..1241762 1 NC_004757.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1241762 secD 1082085 secD Nitrosomonas europaea ATCC 19718 preprotein translocase subunit SecD NP_841200.1 1239915 D 228410 CDS NP_841201.1 30249131 1082086 1241786..1242718 1 NC_004757.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1242718 secF 1082086 secF Nitrosomonas europaea ATCC 19718 preprotein translocase subunit SecF NP_841201.1 1241786 D 228410 CDS NP_841202.1 30249132 1082087 1242777..1243154 1 NC_004757.1 hypothetical protein 1243154 1082087 NE1145 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841202.1 1242777 D 228410 CDS NP_841203.1 30249133 1082088 1243204..1243938 1 NC_004757.1 ubiquinone/menaquinone biosynthesis methlytransferase UbiE 1243938 1082088 NE1146 Nitrosomonas europaea ATCC 19718 ubiquinone/menaquinone biosynthesis methlytransferase UbiE NP_841203.1 1243204 D 228410 CDS NP_841204.1 30249134 1082089 complement(1244008..1244979) 1 NC_004757.1 catalyzes the formation of putrescine from agmatine; agmatinase 1244979 1082089 NE1147 Nitrosomonas europaea ATCC 19718 agmatinase NP_841204.1 1244008 R 228410 CDS NP_841205.1 30249135 1082090 complement(1245067..1245549) 1 NC_004757.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1245549 lspA 1082090 lspA Nitrosomonas europaea ATCC 19718 lipoprotein signal peptidase NP_841205.1 1245067 R 228410 CDS NP_841206.1 30249136 1082091 complement(1245592..1248411) 1 NC_004757.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1248411 ileS 1082091 ileS Nitrosomonas europaea ATCC 19718 isoleucyl-tRNA synthetase NP_841206.1 1245592 R 228410 CDS NP_841207.1 30249137 1082092 complement(1248413..1249384) 1 NC_004757.1 cytidylyltransferase:riboflavin kinase / FAD synthetase 1249384 ribF 1082092 ribF Nitrosomonas europaea ATCC 19718 cytidylyltransferase:riboflavin kinase / FAD synthetase NP_841207.1 1248413 R 228410 CDS NP_841208.1 30249138 1082093 complement(1249493..1249924) 1 NC_004757.1 sec-independent protein translocase protein TatC 1249924 1082093 NE1151 Nitrosomonas europaea ATCC 19718 sec-independent protein translocase protein TatC NP_841208.1 1249493 R 228410 CDS NP_841209.1 30249139 1082094 1250060..1252300 1 NC_004757.1 solute-binding family 5 protein 1252300 hbpA 1082094 hbpA Nitrosomonas europaea ATCC 19718 solute-binding family 5 protein NP_841209.1 1250060 D 228410 CDS NP_841210.1 30249140 1082095 1252318..1253295 1 NC_004757.1 appB; oligopeptide ABC transporter 1253295 appB 1082095 appB Nitrosomonas europaea ATCC 19718 appB; oligopeptide ABC transporter NP_841210.1 1252318 D 228410 CDS NP_841211.1 30249141 1082096 1253429..1255096 1 NC_004757.1 hypothetical protein 1255096 1082096 NE1154 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841211.1 1253429 D 228410 CDS NP_841212.1 30249142 1082097 1255144..1256088 1 NC_004757.1 DnaJ N-terminal domain-containing protein 1256088 1082097 NE1155 Nitrosomonas europaea ATCC 19718 DnaJ N-terminal domain-containing protein NP_841212.1 1255144 D 228410 CDS NP_841213.1 30249143 1082098 1256090..1256389 1 NC_004757.1 MerR family transcriptional regulator 1256389 1082098 NE1156 Nitrosomonas europaea ATCC 19718 MerR family transcriptional regulator NP_841213.1 1256090 D 228410 CDS NP_841214.1 30249144 1082099 1256446..1257339 1 NC_004757.1 hypothetical protein 1257339 1082099 NE1157 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841214.1 1256446 D 228410 CDS NP_841215.1 30249145 1082100 1257356..1257913 1 NC_004757.1 NUDIX hydrolase 1257913 1082100 NE1158 Nitrosomonas europaea ATCC 19718 NUDIX hydrolase NP_841215.1 1257356 D 228410 CDS NP_841216.1 30249146 1082103 1258933..1259202 1 NC_004757.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1259202 xseB 1082103 xseB Nitrosomonas europaea ATCC 19718 exodeoxyribonuclease VII small subunit NP_841216.1 1258933 D 228410 CDS NP_841217.1 30249147 1082104 1259192..1260085 1 NC_004757.1 polyprenyl synthetase 1260085 ispA 1082104 ispA Nitrosomonas europaea ATCC 19718 polyprenyl synthetase NP_841217.1 1259192 D 228410 CDS NP_841218.1 30249148 1082105 1260143..1261987 1 NC_004757.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1261987 dxs 1082105 dxs Nitrosomonas europaea ATCC 19718 1-deoxy-D-xylulose-5-phosphate synthase NP_841218.1 1260143 D 228410 CDS NP_841219.1 30249149 1082106 1262036..1262386 1 NC_004757.1 hypothetical protein 1262386 1082106 NE1162 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841219.1 1262036 D 228410 CDS NP_841220.1 30249150 1082107 1262582..1263388 1 NC_004757.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase 1263388 1082107 NE1163 Nitrosomonas europaea ATCC 19718 GTP cyclohydrolase NP_841220.1 1262582 D 228410 CDS NP_841221.1 30249151 1082108 1263676..1264290 1 NC_004757.1 hypothetical protein 1264290 1082108 NE1164 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841221.1 1263676 D 228410 CDS NP_841222.1 30249152 1082109 complement(1264314..1265054) 1 NC_004757.1 Involved in pteridine salvage and antifolate resistance; pteridine reductase 1265054 1082109 NE1165 Nitrosomonas europaea ATCC 19718 pteridine reductase NP_841222.1 1264314 R 228410 CDS NP_841223.1 30249153 1082110 1265130..1266302 1 NC_004757.1 hypothetical protein 1266302 1082110 NE1166 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841223.1 1265130 D 228410 CDS NP_841224.1 30249154 1082111 complement(1266372..1267112) 1 NC_004757.1 purine phosphorylase family protein 1 1267112 1082111 NE1167 Nitrosomonas europaea ATCC 19718 purine phosphorylase family protein 1 NP_841224.1 1266372 R 228410 CDS NP_841225.1 30249155 1082112 complement(1267109..1269109) 1 NC_004757.1 prenyltransferase and squalene oxidase repeat-containing protein 1269109 1082112 NE1168 Nitrosomonas europaea ATCC 19718 prenyltransferase and squalene oxidase repeat-containing protein NP_841225.1 1267109 R 228410 CDS NP_841226.1 30249156 1082113 complement(1269234..1270004) 1 NC_004757.1 hypothetical protein 1270004 vacJ 1082113 vacJ Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841226.1 1269234 R 228410 CDS NP_841227.1 30249157 1082114 complement(1270057..1271103) 1 NC_004757.1 dihydroflavonol-4-reductase 1271103 dfrA 1082114 dfrA Nitrosomonas europaea ATCC 19718 dihydroflavonol-4-reductase NP_841227.1 1270057 R 228410 CDS NP_841228.1 30249158 1082115 complement(1271172..1271780) 1 NC_004757.1 MotA/TolQ/ExbB proton channel family protein 1271780 exbB2 1082115 exbB2 Nitrosomonas europaea ATCC 19718 MotA/TolQ/ExbB proton channel family protein NP_841228.1 1271172 R 228410 CDS NP_841229.1 30249159 1082116 1272075..1273421 1 NC_004757.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1273421 xseA 1082116 xseA Nitrosomonas europaea ATCC 19718 exodeoxyribonuclease VII large subunit NP_841229.1 1272075 D 228410 CDS NP_841230.1 30249160 1082117 1273630..1274010 1 NC_004757.1 hypothetical protein 1274010 1082117 NE1173 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841230.1 1273630 D 228410 CDS NP_841231.1 30249161 1082118 1274051..1275238 1 NC_004757.1 hypothetical protein 1275238 1082118 NE1174 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841231.1 1274051 D 228410 CDS NP_841232.1 30249162 1082119 1275245..1275739 1 NC_004757.1 disulfide bond formation protein DsbB 1275739 dsbB 1082119 dsbB Nitrosomonas europaea ATCC 19718 disulfide bond formation protein DsbB NP_841232.1 1275245 D 228410 CDS NP_841233.1 30249163 1082120 1275767..1276555 1 NC_004757.1 peptidoglycan binding domain-containing protein 1276555 1082120 NE1176 Nitrosomonas europaea ATCC 19718 peptidoglycan binding domain-containing protein NP_841233.1 1275767 D 228410 CDS NP_841234.1 30249164 1082122 complement(1277247..1278290) 1 NC_004757.1 integrase catalytic subunit 1278290 1082122 NE1178 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841234.1 1277247 R 228410 CDS NP_841235.1 30249165 1082123 complement(1278486..1278995) 1 NC_004757.1 transmembrane protein 1278995 1082123 NE1179 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841235.1 1278486 R 228410 CDS NP_841236.1 30249166 1082124 1279067..1279312 1 NC_004757.1 hypothetical protein 1279312 1082124 NE1180 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841236.1 1279067 D 228410 CDS NP_841237.1 30249167 1082125 complement(1279373..1279714) 1 NC_004757.1 PemK-like protein 1279714 1082125 NE1181 Nitrosomonas europaea ATCC 19718 PemK-like protein NP_841237.1 1279373 R 228410 CDS NP_841238.1 30249168 1082126 complement(1279707..1279949) 1 NC_004757.1 CopG family transcriptional regulator 1279949 1082126 NE1182 Nitrosomonas europaea ATCC 19718 CopG family transcriptional regulator NP_841238.1 1279707 R 228410 CDS NP_841239.1 30249169 1082127 complement(1280204..1282648) 1 NC_004757.1 serine protease 1282648 1082127 NE1183 Nitrosomonas europaea ATCC 19718 serine protease NP_841239.1 1280204 R 228410 CDS NP_841240.1 30249170 1082128 complement(1282842..1283570) 1 NC_004757.1 phospholipid/glycerol acyltransferase 1283570 nlaB 1082128 nlaB Nitrosomonas europaea ATCC 19718 phospholipid/glycerol acyltransferase NP_841240.1 1282842 R 228410 CDS NP_841241.1 30249171 1082129 complement(1283570..1284112) 1 NC_004757.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 1284112 1082129 NE1185 Nitrosomonas europaea ATCC 19718 D,D-heptose 1,7-bisphosphate phosphatase NP_841241.1 1283570 R 228410 CDS NP_841242.1 30249172 1082130 complement(1284124..1286271) 1 NC_004757.1 glycyl-tRNA synthetase subunit beta 1286271 glyS 1082130 glyS Nitrosomonas europaea ATCC 19718 glycyl-tRNA synthetase subunit beta NP_841242.1 1284124 R 228410 CDS NP_841243.1 30249173 1082131 complement(1286268..1287245) 1 NC_004757.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1287245 glyQ 1082131 glyQ Nitrosomonas europaea ATCC 19718 glycyl-tRNA synthetase subunit alpha NP_841243.1 1286268 R 228410 CDS NP_841244.1 30249174 1082132 complement(1287247..1288740) 1 NC_004757.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1288740 lnt 1082132 lnt Nitrosomonas europaea ATCC 19718 apolipoprotein N-acyltransferase NP_841244.1 1287247 R 228410 CDS NP_841245.1 30249175 1082133 complement(1288960..1289328) 1 NC_004757.1 hypothetical protein 1289328 1082133 NE1189 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841245.1 1288960 R 228410 CDS NP_841246.1 30249176 1082134 complement(1289572..1291977) 1 NC_004757.1 TonB-dependent receptor protein 1291977 fpvA 1082134 fpvA Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841246.1 1289572 R 228410 CDS NP_841247.1 30249177 1082135 complement(1292139..1293365) 1 NC_004757.1 transmembrane sensor 1293365 1082135 NE1191 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_841247.1 1292139 R 228410 CDS NP_841248.1 30249178 1082136 complement(1293487..1294014) 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 1294014 1082136 NE1192 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_841248.1 1293487 R 228410 CDS NP_841249.1 30249179 1082138 complement(1296474..1297694) 1 NC_004757.1 hypothetical protein 1297694 1082138 NE1194 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841249.1 1296474 R 228410 CDS NP_841250.1 30249180 1082139 complement(1297688..1298482) 1 NC_004757.1 nitrate ABC transporter ATPase 1298482 1082139 NE1195 Nitrosomonas europaea ATCC 19718 nitrate ABC transporter ATPase NP_841250.1 1297688 R 228410 CDS NP_841251.1 30249181 1082140 complement(1298479..1299267) 1 NC_004757.1 ABC transporter permease 1299267 1082140 NE1196 Nitrosomonas europaea ATCC 19718 ABC transporter permease NP_841251.1 1298479 R 228410 CDS NP_841252.1 30249182 1082141 complement(1299264..1300259) 1 NC_004757.1 hypothetical protein 1300259 1082141 NE1197 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841252.1 1299264 R 228410 CDS NP_841253.1 30249183 1082142 1300720..1301280 1 NC_004757.1 hypothetical protein 1301280 1082142 NE1198 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841253.1 1300720 D 228410 CDS NP_841254.1 30249184 1082143 complement(1301317..1301793) 1 NC_004757.1 hypothetical protein 1301793 1082143 NE1199 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841254.1 1301317 R 228410 CDS NP_841255.1 30249185 1082144 complement(1302050..1302400) 1 NC_004757.1 hypothetical protein 1302400 1082144 NE1200 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841255.1 1302050 R 228410 CDS NP_841256.1 30249186 1082145 complement(1302722..1303684) 1 NC_004757.1 universal stress protein 1303684 1082145 NE1201 Nitrosomonas europaea ATCC 19718 universal stress protein NP_841256.1 1302722 R 228410 CDS NP_841257.1 30249187 1082146 1304195..1304830 1 NC_004757.1 hypothetical protein 1304830 1082146 NE1202 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841257.1 1304195 D 228410 CDS NP_841258.1 30249188 1082147 1305064..1306113 1 NC_004757.1 similar to (AF145800) immunogenic 75 kDa protein PG4 [Porphyromonas gingivalis], evalue=8.00e-07, 24% identity; immunogenic 75 kDa protein PG4 1306113 1082147 NE1203 Nitrosomonas europaea ATCC 19718 immunogenic 75 kDa protein PG4 NP_841258.1 1305064 D 228410 CDS NP_841259.1 30249189 1082148 1306210..1307823 1 NC_004757.1 hypothetical protein 1307823 1082148 NE1204 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841259.1 1306210 D 228410 CDS NP_841260.1 30249190 1082149 complement(1307957..1310224) 1 NC_004757.1 TonB-dependent receptor protein 1310224 1082149 NE1205 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841260.1 1307957 R 228410 CDS NP_841261.1 30249191 1082150 complement(1310341..1310817) 1 NC_004757.1 glutathione peroxidase 1310817 1082150 NE1206 Nitrosomonas europaea ATCC 19718 glutathione peroxidase NP_841261.1 1310341 R 228410 CDS NP_841262.1 30249192 1082151 1310848..1311408 1 NC_004757.1 hexapeptide repeat-containing transferase 1311408 1082151 NE1207 Nitrosomonas europaea ATCC 19718 hexapeptide repeat-containing transferase NP_841262.1 1310848 D 228410 CDS NP_841263.1 30249193 1082152 1311771..1312805 1 NC_004757.1 hypothetical protein 1312805 1082152 NE1208 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841263.1 1311771 D 228410 CDS NP_841264.1 30249194 1082153 1312807..1314579 1 NC_004757.1 multidrug ABC transporter ATPase 1314579 1082153 NE1209 Nitrosomonas europaea ATCC 19718 multidrug ABC transporter ATPase NP_841264.1 1312807 D 228410 CDS NP_841265.1 30249195 1082154 1314576..1315727 1 NC_004757.1 ABC transporter permease 1315727 1082154 NE1210 Nitrosomonas europaea ATCC 19718 ABC transporter permease NP_841265.1 1314576 D 228410 CDS NP_841266.1 30249196 1082155 1315734..1316858 1 NC_004757.1 ABC transporter permease 1316858 1082155 NE1211 Nitrosomonas europaea ATCC 19718 ABC transporter permease NP_841266.1 1315734 D 228410 CDS NP_841267.1 30249197 1082156 1317108..1318049 1 NC_004757.1 PfkB family of carbohydrate kinase 1318049 1082156 NE1212 Nitrosomonas europaea ATCC 19718 PfkB family of carbohydrate kinase NP_841267.1 1317108 D 228410 CDS NP_841268.1 30249198 1082157 1318057..1320198 1 NC_004757.1 group 1 glycosyl transferase 1320198 sps 1082157 sps Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_841268.1 1318057 D 228410 CDS NP_841269.1 30249199 1082158 1320268..1322652 1 NC_004757.1 sucrose synthase:glycosyl transferase group 1 1322652 ss2 1082158 ss2 Nitrosomonas europaea ATCC 19718 sucrose synthase:glycosyl transferase group 1 NP_841269.1 1320268 D 228410 CDS NP_841270.1 30249200 1082159 1322727..1323566 1 NC_004757.1 short-chain dehydrogenase/reductase 1323566 1082159 NE1215 Nitrosomonas europaea ATCC 19718 short-chain dehydrogenase/reductase NP_841270.1 1322727 D 228410 CDS NP_841271.1 30249201 1082160 complement(1323582..1325750) 1 NC_004757.1 HAD family hydrolase 1325750 1082160 NE1216 Nitrosomonas europaea ATCC 19718 HAD family hydrolase NP_841271.1 1323582 R 228410 CDS NP_841272.1 30249202 1082161 1325996..1326508 1 NC_004757.1 RNA polymerase ECF-subfamily sigma-70 factor 1326508 1082161 NE1217 Nitrosomonas europaea ATCC 19718 RNA polymerase ECF-subfamily sigma-70 factor NP_841272.1 1325996 D 228410 CDS NP_841273.1 30249203 1082162 1326587..1327552 1 NC_004757.1 FecR protein 1327552 fecR 1082162 fecR Nitrosomonas europaea ATCC 19718 FecR protein NP_841273.1 1326587 D 228410 CDS NP_841274.1 30249204 1082163 complement(1327791..1328948) 1 NC_004757.1 UMUC family protein 1328948 1082163 NE1219 Nitrosomonas europaea ATCC 19718 UMUC family protein NP_841274.1 1327791 R 228410 CDS NP_841275.1 30249205 1082166 complement(1331070..1331819) 1 NC_004757.1 IS4 family transposase 1331819 1082166 NE1222 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_841275.1 1331070 R 228410 CDS NP_841276.1 30249206 1082167 complement(1331999..1333021) 1 NC_004757.1 transposase 1333021 1082167 NE1223 Nitrosomonas europaea ATCC 19718 transposase NP_841276.1 1331999 R 228410 CDS NP_841277.1 30249207 1082168 1333144..1333407 1 NC_004757.1 hypothetical protein 1333407 1082168 NE1224 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841277.1 1333144 D 228410 CDS NP_841278.1 30249208 1082169 1333388..1333861 1 NC_004757.1 hypothetical protein 1333861 1082169 NE1225 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841278.1 1333388 D 228410 CDS NP_841279.1 30249209 1082170 complement(1333949..1334710) 1 NC_004757.1 hypothetical protein 1334710 1082170 NE1226 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841279.1 1333949 R 228410 CDS NP_841280.1 30249210 1082171 1335222..1335800 1 NC_004757.1 hypothetical protein 1335800 1082171 NE1227 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841280.1 1335222 D 228410 CDS NP_841281.1 30249211 1082172 complement(1336037..1337293) 1 NC_004757.1 hypothetical protein 1337293 1082172 NE1228 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841281.1 1336037 R 228410 CDS NP_841282.1 30249212 1082173 complement(1337349..1338392) 1 NC_004757.1 peptide chain release factor 2 1338392 prfB 1082173 prfB Nitrosomonas europaea ATCC 19718 peptide chain release factor 2 NP_841282.1 1337349 R 228410 CDS NP_841283.1 30249213 1082174 complement(1338493..1339776) 1 NC_004757.1 hypothetical protein 1339776 1082174 NE1230 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841283.1 1338493 R 228410 CDS NP_841284.1 30249214 1082175 complement(1339778..1340584) 1 NC_004757.1 hypothetical protein 1340584 1082175 NE1231 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841284.1 1339778 R 228410 CDS NP_841285.1 30249215 1082176 complement(1340849..1342063) 1 NC_004757.1 hypothetical protein 1342063 1082176 NE1232 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841285.1 1340849 R 228410 CDS NP_841286.1 30249216 1082177 complement(1342060..1343586) 1 NC_004757.1 peroxidase 1343586 1082177 NE1233 Nitrosomonas europaea ATCC 19718 peroxidase NP_841286.1 1342060 R 228410 CDS NP_841287.1 30249217 1082178 complement(1343601..1344905) 1 NC_004757.1 hypothetical protein 1344905 1082178 NE1234 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841287.1 1343601 R 228410 CDS NP_841288.1 30249218 1082179 complement(1344939..1345394) 1 NC_004757.1 hypothetical protein 1345394 1082179 NE1235 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841288.1 1344939 R 228410 CDS NP_841289.1 30249219 1082180 1345778..1348447 1 NC_004757.1 hypothetical protein 1348447 1082180 NE1236 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841289.1 1345778 D 228410 CDS NP_841290.1 30249220 1082181 1348472..1350496 1 NC_004757.1 glucose-methanol-choline oxidoreductase 1350496 1082181 NE1237 Nitrosomonas europaea ATCC 19718 glucose-methanol-choline oxidoreductase NP_841290.1 1348472 D 228410 CDS NP_841291.1 30249221 1082182 complement(1350584..1353445) 1 NC_004757.1 oxygenase 1353445 1082182 NE1238 Nitrosomonas europaea ATCC 19718 oxygenase NP_841291.1 1350584 R 228410 CDS NP_841292.1 30249222 1082183 complement(1353501..1355198) 1 NC_004757.1 lipoxygenase 1355198 ALOX5 1082183 ALOX5 Nitrosomonas europaea ATCC 19718 lipoxygenase NP_841292.1 1353501 R 228410 CDS NP_841293.1 30249223 1082184 complement(1355234..1356835) 1 NC_004757.1 cyclooxygenase-2 1356835 Ptgs1 1082184 Ptgs1 Nitrosomonas europaea ATCC 19718 cyclooxygenase-2 NP_841293.1 1355234 R 228410 CDS NP_841294.1 30249224 1082185 complement(1357006..1358508) 1 NC_004757.1 tyrosinase 1358508 1082185 NE1241 Nitrosomonas europaea ATCC 19718 tyrosinase NP_841294.1 1357006 R 228410 CDS NP_841295.1 30249225 1082186 complement(1358541..1358756) 1 NC_004757.1 hypothetical protein 1358756 1082186 NE1242 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841295.1 1358541 R 228410 CDS NP_841296.1 30249226 1082187 complement(1358753..1359346) 1 NC_004757.1 hypothetical protein 1359346 1082187 NE1243 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841296.1 1358753 R 228410 CDS NP_841297.1 30249227 1082188 complement(1359354..1360154) 1 NC_004757.1 hypothetical protein 1360154 1082188 NE1244 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841297.1 1359354 R 228410 CDS NP_841298.1 30249228 1082189 complement(1360294..1361001) 1 NC_004757.1 Kazal domain-containing protein 1361001 1082189 NE1245 Nitrosomonas europaea ATCC 19718 Kazal domain-containing protein NP_841298.1 1360294 R 228410 CDS NP_841299.1 30249229 1082190 complement(1361118..1361402) 1 NC_004757.1 hypothetical protein 1361402 1082190 NE1246 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841299.1 1361118 R 228410 CDS NP_841300.1 30249230 1082191 complement(1361520..1362878) 1 NC_004757.1 hypothetical protein 1362878 1082191 NE1247 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841300.1 1361520 R 228410 CDS NP_841301.1 30249231 1082192 1363204..1363632 1 NC_004757.1 hypothetical protein 1363632 1082192 NE1248 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841301.1 1363204 D 228410 CDS NP_841302.1 30249232 1082194 complement(1363930..1369071) 1 NC_004757.1 two-component hybrid sensor and regulator 1369071 1082194 NE1250 Nitrosomonas europaea ATCC 19718 two-component hybrid sensor and regulator NP_841302.1 1363930 R 228410 CDS NP_841303.1 30249233 1082195 complement(1369145..1371205) 1 NC_004757.1 chemotaxis sensory transducer protein 1371205 pilJ 1082195 pilJ Nitrosomonas europaea ATCC 19718 chemotaxis sensory transducer protein NP_841303.1 1369145 R 228410 CDS NP_841304.1 30249234 1082196 complement(1371536..1372180) 1 NC_004757.1 hypothetical protein 1372180 1082196 NE1252 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841304.1 1371536 R 228410 CDS NP_841305.1 30249235 1082197 complement(1372183..1372563) 1 NC_004757.1 general secretory pathway protein I 1372563 1082197 NE1253 Nitrosomonas europaea ATCC 19718 general secretory pathway protein I NP_841305.1 1372183 R 228410 CDS NP_841306.1 30249236 1082198 complement(1372568..1372942) 1 NC_004757.1 general secretory pathway protein H 1372942 1082198 NE1254 Nitrosomonas europaea ATCC 19718 general secretory pathway protein H NP_841306.1 1372568 R 228410 CDS NP_841307.1 30249237 1082199 complement(1372971..1373366) 1 NC_004757.1 general secretion pathway protein G 1373366 1082199 NE1255 Nitrosomonas europaea ATCC 19718 general secretion pathway protein G NP_841307.1 1372971 R 228410 CDS NP_841308.1 30249238 1082200 complement(1373421..1374641) 1 NC_004757.1 type II secretion system protein 1374641 1082200 NE1256 Nitrosomonas europaea ATCC 19718 type II secretion system protein NP_841308.1 1373421 R 228410 CDS NP_841309.1 30249239 1082201 complement(1374638..1376368) 1 NC_004757.1 type II secretion system protein E 1376368 1082201 NE1257 Nitrosomonas europaea ATCC 19718 type II secretion system protein E NP_841309.1 1374638 R 228410 CDS NP_841310.1 30249240 1082202 complement(1377548..1378603) 1 NC_004757.1 ParB-like nuclease domain-containing protein 1378603 1082202 NE1258 Nitrosomonas europaea ATCC 19718 ParB-like nuclease domain-containing protein NP_841310.1 1377548 R 228410 CDS NP_841311.1 30249241 1082203 complement(1378675..1379310) 1 NC_004757.1 hypothetical protein 1379310 1082203 NE1259 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841311.1 1378675 R 228410 CDS NP_841312.1 30249242 1082204 1379498..1379821 1 NC_004757.1 transposase IS911 1379821 1082204 NE1260 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_841312.1 1379498 D 228410 CDS NP_841313.1 30249243 1082205 1379875..1380726 1 NC_004757.1 integrase catalytic subunit 1380726 1082205 NE1261 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841313.1 1379875 D 228410 CDS NP_841314.1 30249244 1082207 1382230..1383717 1 NC_004757.1 hypothetical protein 1383717 1082207 NE1263 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841314.1 1382230 D 228410 CDS NP_841315.1 30249245 1082208 complement(1383968..1385011) 1 NC_004757.1 integrase catalytic subunit 1385011 1082208 NE1264 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841315.1 1383968 R 228410 CDS NP_841316.1 30249246 1082209 complement(1385550..1386059) 1 NC_004757.1 N-acetyltransferase GCN5 1386059 1082209 NE1265 Nitrosomonas europaea ATCC 19718 N-acetyltransferase GCN5 NP_841316.1 1385550 R 228410 CDS NP_841317.1 30249247 1082210 complement(1386112..1386501) 1 NC_004757.1 death on curing protein 1386501 1082210 NE1266 Nitrosomonas europaea ATCC 19718 death on curing protein NP_841317.1 1386112 R 228410 CDS NP_841318.1 30249248 1082212 complement(1387552..1387758) 1 NC_004757.1 hypothetical protein 1387758 1082212 NE1268 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841318.1 1387552 R 228410 CDS NP_841319.1 30249249 1082213 complement(1387893..1388330) 1 NC_004757.1 hypothetical protein 1388330 1082213 NE1269 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841319.1 1387893 R 228410 CDS NP_841320.1 30249250 1082214 1388563..1388886 1 NC_004757.1 transposase IS911 1388886 1082214 NE1270 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_841320.1 1388563 D 228410 CDS NP_841321.1 30249251 1082215 1388940..1389791 1 NC_004757.1 integrase catalytic subunit 1389791 1082215 NE1271 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841321.1 1388940 D 228410 CDS NP_841322.1 30249252 1082217 complement(1390389..1391570) 1 NC_004757.1 hypothetical protein 1391570 1082217 NE1273 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841322.1 1390389 R 228410 CDS NP_841323.1 30249253 1082218 1391628..1392515 1 NC_004757.1 cytochrome c, class I 1392515 1082218 NE1274 Nitrosomonas europaea ATCC 19718 cytochrome c, class I NP_841323.1 1391628 D 228410 CDS NP_841324.1 30249254 1082219 complement(1392595..1393296) 1 NC_004757.1 hypothetical protein 1393296 1082219 NE1275 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841324.1 1392595 R 228410 CDS NP_841325.1 30249255 1082220 1393782..1394186 1 NC_004757.1 hypothetical protein 1394186 1082220 NE1276 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841325.1 1393782 D 228410 CDS NP_841326.1 30249256 1082221 complement(1394337..1396721) 1 NC_004757.1 hypothetical protein 1396721 1082221 NE1277 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841326.1 1394337 R 228410 CDS NP_841327.1 30249257 1082222 1397390..1399756 1 NC_004757.1 ATP-dependent proteinase La 1399756 lonA 1082222 lonA Nitrosomonas europaea ATCC 19718 ATP-dependent proteinase La NP_841327.1 1397390 D 228410 CDS NP_841328.1 30249258 1082223 1399817..1400224 1 NC_004757.1 hypothetical protein 1400224 1082223 NE1279 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841328.1 1399817 D 228410 CDS NP_841329.1 30249259 1082224 1400383..1400709 1 NC_004757.1 hypothetical protein 1400709 1082224 NE1280 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841329.1 1400383 D 228410 CDS NP_841330.1 30249260 1082225 complement(1400773..1402071) 1 NC_004757.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1402071 purA 1082225 purA Nitrosomonas europaea ATCC 19718 adenylosuccinate synthetase NP_841330.1 1400773 R 228410 CDS NP_841331.1 30249261 1082226 complement(1402305..1403480) 1 NC_004757.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 1403480 hisZ 1082226 hisZ Nitrosomonas europaea ATCC 19718 ATP phosphoribosyltransferase regulatory subunit NP_841331.1 1402305 R 228410 CDS NP_841332.1 30249262 1082227 complement(1403556..1403756) 1 NC_004757.1 hypothetical protein 1403756 1082227 NE1283 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841332.1 1403556 R 228410 CDS NP_841333.1 30249263 1082228 complement(1403875..1404753) 1 NC_004757.1 Band 7 protein 1404753 1082228 NE1284 Nitrosomonas europaea ATCC 19718 Band 7 protein NP_841333.1 1403875 R 228410 CDS NP_841334.1 30249264 1082229 complement(1404753..1405943) 1 NC_004757.1 Band 7 protein 1405943 1082229 NE1285 Nitrosomonas europaea ATCC 19718 Band 7 protein NP_841334.1 1404753 R 228410 CDS NP_841335.1 30249265 1082230 complement(1405949..1407139) 1 NC_004757.1 GTP-binding protein HflX 1407139 1082230 NE1286 Nitrosomonas europaea ATCC 19718 GTP-binding protein HflX NP_841335.1 1405949 R 228410 CDS NP_841336.1 30249266 1082231 complement(1407129..1407383) 1 NC_004757.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1407383 hfq 1082231 hfq Nitrosomonas europaea ATCC 19718 RNA-binding protein Hfq NP_841336.1 1407129 R 228410 CDS NP_841337.1 30249267 1082232 complement(1407718..1409076) 1 NC_004757.1 sensory transduction histidine kinase 1409076 phoR 1082232 phoR Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_841337.1 1407718 R 228410 CDS NP_841338.1 30249268 1082233 complement(1409159..1410184) 1 NC_004757.1 esterase/lipase/thioesterase family protein 1410184 1082233 NE1289 Nitrosomonas europaea ATCC 19718 esterase/lipase/thioesterase family protein NP_841338.1 1409159 R 228410 CDS NP_841339.1 30249269 1082234 complement(1410232..1411353) 1 NC_004757.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1411353 proB 1082234 proB Nitrosomonas europaea ATCC 19718 gamma-glutamyl kinase NP_841339.1 1410232 R 228410 CDS NP_841340.1 30249270 1082235 complement(1411359..1412390) 1 NC_004757.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1412390 obgE 1082235 obgE Nitrosomonas europaea ATCC 19718 GTPase ObgE NP_841340.1 1411359 R 228410 CDS NP_841341.1 30249271 1082236 complement(1412522..1412779) 1 NC_004757.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1412779 rpmA 1082236 rpmA Nitrosomonas europaea ATCC 19718 50S ribosomal protein L27 NP_841341.1 1412522 R 228410 CDS NP_841342.1 30249272 1082237 complement(1412792..1413103) 1 NC_004757.1 50S ribosomal protein L21 1413103 rplU 1082237 rplU Nitrosomonas europaea ATCC 19718 50S ribosomal protein L21 NP_841342.1 1412792 R 228410 CDS NP_841343.1 30249273 1082238 1413295..1414596 1 NC_004757.1 glutamate--cysteine ligase 1414596 1082238 NE1294 Nitrosomonas europaea ATCC 19718 glutamate--cysteine ligase NP_841343.1 1413295 D 228410 CDS NP_841344.1 30249274 1082239 1414596..1415558 1 NC_004757.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 1415558 gshB 1082239 gshB Nitrosomonas europaea ATCC 19718 glutathione synthetase NP_841344.1 1414596 D 228410 CDS NP_841345.1 30249275 1082240 complement(1415582..1416331) 1 NC_004757.1 cAMP-dependent protein kinase 1416331 1082240 NE1296 Nitrosomonas europaea ATCC 19718 cAMP-dependent protein kinase NP_841345.1 1415582 R 228410 CDS NP_841346.1 30249276 1082241 complement(1416385..1416804) 1 NC_004757.1 hypothetical protein 1416804 1082241 NE1297 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841346.1 1416385 R 228410 CDS NP_841347.1 30249277 1082242 complement(1416818..1420315) 1 NC_004757.1 hypothetical protein 1420315 1082242 NE1298 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841347.1 1416818 R 228410 CDS NP_841348.1 30249278 1082243 complement(1420456..1422735) 1 NC_004757.1 guanylate cyclase 1422735 1082243 NE1299 Nitrosomonas europaea ATCC 19718 guanylate cyclase NP_841348.1 1420456 R 228410 CDS NP_841349.1 30249279 1082244 complement(1423064..1423339) 1 NC_004757.1 hypothetical protein 1423339 1082244 NE1300 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841349.1 1423064 R 228410 CDS NP_841350.1 30249280 1082245 1423652..1424122 1 NC_004757.1 hypothetical protein 1424122 1082245 NE1301 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841350.1 1423652 D 228410 CDS NP_841351.1 30249281 1082246 complement(1424274..1425371) 1 NC_004757.1 transposase 1425371 1082246 NE1302 Nitrosomonas europaea ATCC 19718 transposase NP_841351.1 1424274 R 228410 CDS NP_841352.1 30249282 1082247 1425501..1425992 1 NC_004757.1 hypothetical protein 1425992 1082247 NE1303 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841352.1 1425501 D 228410 CDS NP_841353.1 30249283 1082248 complement(1426056..1426358) 1 NC_004757.1 transcriptional regulator LacI 1426358 1082248 NE1304 Nitrosomonas europaea ATCC 19718 transcriptional regulator LacI NP_841353.1 1426056 R 228410 CDS NP_841354.1 30249284 1082249 complement(1426371..1426649) 1 NC_004757.1 proteic killer suppression protein 1426649 1082249 NE1305 Nitrosomonas europaea ATCC 19718 proteic killer suppression protein NP_841354.1 1426371 R 228410 CDS NP_841355.1 30249285 1082250 complement(1426777..1427103) 1 NC_004757.1 hypothetical protein 1427103 1082250 NE1306 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841355.1 1426777 R 228410 CDS NP_841356.1 30249286 1082251 complement(1427100..1427432) 1 NC_004757.1 hypothetical protein 1427432 1082251 NE1307 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841356.1 1427100 R 228410 CDS NP_841357.1 30249287 1082252 complement(1427752..1428162) 1 NC_004757.1 fimbrial protein pilin: general secretion pathway protein H 1428162 1082252 NE1308 Nitrosomonas europaea ATCC 19718 fimbrial protein pilin: general secretion pathway protein H NP_841357.1 1427752 R 228410 CDS NP_841358.1 30249288 1082253 complement(1428787..1429083) 1 NC_004757.1 hypothetical protein 1429083 1082253 NE1309 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841358.1 1428787 R 228410 CDS NP_841359.1 30249289 1082254 complement(1429522..1430811) 1 NC_004757.1 HipA protein 1430811 hipA 1082254 hipA Nitrosomonas europaea ATCC 19718 HipA protein NP_841359.1 1429522 R 228410 CDS NP_841360.1 30249290 1082255 complement(1430801..1431064) 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 1431064 1082255 NE1311 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_841360.1 1430801 R 228410 CDS NP_841361.1 30249291 1082256 complement(1431744..1431947) 1 NC_004757.1 cold shock DNA-binding domain-containing protein 1431947 cspD2 1082256 cspD2 Nitrosomonas europaea ATCC 19718 cold shock DNA-binding domain-containing protein NP_841361.1 1431744 R 228410 CDS NP_841362.1 30249292 1082259 complement(1432854..1433387) 1 NC_004757.1 response regulator receiver domain/DnaJ domain-containing protein 1433387 1082259 NE1313 Nitrosomonas europaea ATCC 19718 response regulator receiver domain/DnaJ domain-containing protein NP_841362.1 1432854 R 228410 CDS NP_841363.1 30249293 1082260 complement(1433412..1434800) 1 NC_004757.1 two-component sensor 1434800 1082260 NE1314 Nitrosomonas europaea ATCC 19718 two-component sensor NP_841363.1 1433412 R 228410 CDS NP_841364.1 30249294 1082261 complement(1434927..1435931) 1 NC_004757.1 cytochrome c551 peroxidase 1435931 ccp 1082261 ccp Nitrosomonas europaea ATCC 19718 cytochrome c551 peroxidase NP_841364.1 1434927 R 228410 CDS NP_841365.1 30249295 1082262 complement(1436035..1436598) 1 NC_004757.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 1436598 1082262 NE1316 Nitrosomonas europaea ATCC 19718 dinucleoside polyphosphate hydrolase NP_841365.1 1436035 R 228410 CDS NP_841366.1 30249296 1082263 1436837..1438543 1 NC_004757.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1438543 proS 1082263 proS Nitrosomonas europaea ATCC 19718 prolyl-tRNA synthetase NP_841366.1 1436837 D 228410 CDS NP_841367.1 30249297 1082264 1438531..1439124 1 NC_004757.1 SLT domain-containing protein 1439124 1082264 NE1318 Nitrosomonas europaea ATCC 19718 SLT domain-containing protein NP_841367.1 1438531 D 228410 CDS NP_841368.1 30249298 1082265 complement(1439142..1439603) 1 NC_004757.1 thioredoxin 1439603 1082265 NE1319 Nitrosomonas europaea ATCC 19718 thioredoxin NP_841368.1 1439142 R 228410 CDS NP_841369.1 30249299 1082266 complement(1439777..1441309) 1 NC_004757.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1441309 leuA1 1082266 leuA1 Nitrosomonas europaea ATCC 19718 2-isopropylmalate synthase NP_841369.1 1439777 R 228410 CDS NP_841370.1 30249300 1082267 complement(1441548..1442327) 1 NC_004757.1 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase 1442327 pssA 1082267 pssA Nitrosomonas europaea ATCC 19718 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase NP_841370.1 1441548 R 228410 CDS NP_841371.1 30249301 1082268 complement(1442357..1443007) 1 NC_004757.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1443007 psd 1082268 psd Nitrosomonas europaea ATCC 19718 phosphatidylserine decarboxylase NP_841371.1 1442357 R 228410 CDS NP_841372.1 30249302 1082269 complement(1443012..1444028) 1 NC_004757.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1444028 ilvC 1082269 ilvC Nitrosomonas europaea ATCC 19718 ketol-acid reductoisomerase NP_841372.1 1443012 R 228410 CDS NP_841373.1 30249303 1082270 complement(1444124..1444615) 1 NC_004757.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1444615 ilvH 1082270 ilvH Nitrosomonas europaea ATCC 19718 acetolactate synthase 3 regulatory subunit NP_841373.1 1444124 R 228410 CDS NP_841374.1 30249304 1082271 complement(1444620..1446323) 1 NC_004757.1 thiamine pyrophosphate dependent enzyme 1446323 ilvI 1082271 ilvI Nitrosomonas europaea ATCC 19718 thiamine pyrophosphate dependent enzyme NP_841374.1 1444620 R 228410 CDS NP_841375.1 30249305 1082272 complement(1446639..1448093) 1 NC_004757.1 modulator of DNA gyrase 1448093 tldD 1082272 tldD Nitrosomonas europaea ATCC 19718 modulator of DNA gyrase NP_841375.1 1446639 R 228410 CDS NP_841376.1 30249306 1082273 complement(1448200..1449063) 1 NC_004757.1 carbon-nitrogen hydrolase 1449063 1082273 NE1327 Nitrosomonas europaea ATCC 19718 carbon-nitrogen hydrolase NP_841376.1 1448200 R 228410 CDS NP_841377.1 30249307 1082274 complement(1449291..1453163) 1 NC_004757.1 transmembrane protein 1453163 1082274 NE1328 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841377.1 1449291 R 228410 CDS NP_841378.1 30249308 1082275 1453367..1456156 1 NC_004757.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1456156 glnE 1082275 glnE Nitrosomonas europaea ATCC 19718 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase NP_841378.1 1453367 D 228410 CDS NP_841379.1 30249309 1082276 1456326..1458656 1 NC_004757.1 cis/trans isomerase 1458656 cti 1082276 cti Nitrosomonas europaea ATCC 19718 cis/trans isomerase NP_841379.1 1456326 D 228410 CDS NP_841380.1 30249310 1082277 complement(1458665..1460458) 1 NC_004757.1 gamma-glutamyltranspeptidase 1460458 ggt2 1082277 ggt2 Nitrosomonas europaea ATCC 19718 gamma-glutamyltranspeptidase NP_841380.1 1458665 R 228410 CDS NP_841381.1 30249311 1082281 complement(1461134..1462672) 1 NC_004757.1 similar to (NC_003047) CAPSULAR POLYSACCHARIDE BIOSYNTHESIS\EXPORT TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti], evalue 1e-25, 26% identity; capsular polysaccharide biosynthesis/export transmembrane 1462672 rkpI 1082281 rkpI Nitrosomonas europaea ATCC 19718 capsular polysaccharide biosynthesis/export transmembrane NP_841381.1 1461134 R 228410 CDS NP_841382.1 30249312 1082282 complement(1462662..1463435) 1 NC_004757.1 short-chain dehydrogenase/reductase 1463435 hetN 1082282 hetN Nitrosomonas europaea ATCC 19718 short-chain dehydrogenase/reductase NP_841382.1 1462662 R 228410 CDS NP_841383.1 30249313 1082283 complement(1463419..1464945) 1 NC_004757.1 glycosyl transferase family protein 1464945 1082283 NE1334 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_841383.1 1463419 R 228410 CDS NP_841384.1 30249314 1082284 complement(1464924..1466009) 1 NC_004757.1 spore protein 1466009 ykvP 1082284 ykvP Nitrosomonas europaea ATCC 19718 spore protein NP_841384.1 1464924 R 228410 CDS NP_841385.1 30249315 1082285 complement(1466395..1467699) 1 NC_004757.1 group 1 glycosyl transferase 1467699 1082285 NE1336 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_841385.1 1466395 R 228410 CDS NP_841386.1 30249316 1082286 complement(1467696..1468652) 1 NC_004757.1 hypothetical protein 1468652 1082286 NE1337 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841386.1 1467696 R 228410 CDS NP_841387.1 30249317 1082287 complement(1468694..1468933) 1 NC_004757.1 hypothetical protein 1468933 1082287 NE1338 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841387.1 1468694 R 228410 CDS NP_841388.1 30249318 1082288 complement(1469525..1469815) 1 NC_004757.1 H-NS histone family protein 1469815 1082288 NE1339 Nitrosomonas europaea ATCC 19718 H-NS histone family protein NP_841388.1 1469525 R 228410 CDS NP_841389.1 30249319 1082290 complement(1469837..1470079) 1 NC_004757.1 hypothetical protein 1470079 1082290 NE1340 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841389.1 1469837 R 228410 CDS NP_841390.1 30249320 1082291 complement(1470125..1470679) 1 NC_004757.1 hypothetical protein 1470679 1082291 NE1341 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841390.1 1470125 R 228410 CDS NP_841391.1 30249321 1082292 complement(1470676..1471773) 1 NC_004757.1 glycosyltransferase 1471773 1082292 NE1342 Nitrosomonas europaea ATCC 19718 glycosyltransferase NP_841391.1 1470676 R 228410 CDS NP_841392.1 30249322 1082293 complement(1471770..1472942) 1 NC_004757.1 UDP-glucose/GDP-mannose dehydrogenase family protein 1472942 udg 1082293 udg Nitrosomonas europaea ATCC 19718 UDP-glucose/GDP-mannose dehydrogenase family protein NP_841392.1 1471770 R 228410 CDS NP_841393.1 30249323 1082294 complement(1473509..1473787) 1 NC_004757.1 hypothetical protein 1473787 1082294 NE1344 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841393.1 1473509 R 228410 CDS NP_841394.1 30249324 1082295 complement(1474137..1474397) 1 NC_004757.1 hypothetical protein 1474397 1082295 NE1345 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841394.1 1474137 R 228410 CDS NP_841395.1 30249325 1082296 complement(1474400..1474708) 1 NC_004757.1 hypothetical protein 1474708 1082296 NE1346 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841395.1 1474400 R 228410 CDS NP_841396.1 30249326 1082297 1474936..1475631 1 NC_004757.1 hypothetical protein 1475631 1082297 NE1347 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841396.1 1474936 D 228410 CDS NP_841397.1 30249327 1082298 1475472..1475978 1 NC_004757.1 integrase catalytic subunit 1475978 1082298 NE1348 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841397.1 1475472 D 228410 CDS NP_841398.1 30249328 1082299 complement(1476105..1476500) 1 NC_004757.1 hypothetical protein 1476500 1082299 NE1349 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841398.1 1476105 R 228410 CDS NP_841399.1 30249329 1082300 complement(1476508..1476753) 1 NC_004757.1 hypothetical protein 1476753 1082300 NE1350 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841399.1 1476508 R 228410 CDS NP_841400.1 30249330 1082301 1477435..1478478 1 NC_004757.1 integrase catalytic subunit 1478478 1082301 NE1351 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841400.1 1477435 D 228410 CDS NP_841401.1 30249331 1082302 complement(1478535..1478795) 1 NC_004757.1 hypothetical protein 1478795 1082302 NE1352 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841401.1 1478535 R 228410 CDS NP_841402.1 30249332 1082303 1479618..1479917 1 NC_004757.1 hypothetical protein 1479917 1082303 NE1353 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841402.1 1479618 D 228410 CDS NP_841403.1 30249333 1082304 complement(1480079..1480294) 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 1480294 1082304 NE1354 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_841403.1 1480079 R 228410 CDS NP_841404.1 30249334 1082305 complement(1480914..1481234) 1 NC_004757.1 Cro repressor family protein 1481234 1082305 NE1355 Nitrosomonas europaea ATCC 19718 Cro repressor family protein NP_841404.1 1480914 R 228410 CDS NP_841405.1 30249335 1082306 complement(1481227..1481562) 1 NC_004757.1 hypothetical protein 1481562 1082306 NE1356 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841405.1 1481227 R 228410 CDS NP_841406.1 30249336 1082307 1481646..1481894 1 NC_004757.1 hypothetical protein 1481894 1082307 NE1357 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841406.1 1481646 D 228410 CDS NP_841407.1 30249337 1082310 complement(1482500..1483114) 1 NC_004757.1 abortive phage resistance protein 1483114 1082310 NE1360 Nitrosomonas europaea ATCC 19718 abortive phage resistance protein NP_841407.1 1482500 R 228410 CDS NP_841408.1 30249338 1082311 complement(1483114..1484427) 1 NC_004757.1 abortive phage resistance protein 1484427 1082311 NE1361 Nitrosomonas europaea ATCC 19718 abortive phage resistance protein NP_841408.1 1483114 R 228410 CDS NP_841409.1 30249339 1082312 1484709..1484984 1 NC_004757.1 hypothetical protein 1484984 1082312 NE1362 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841409.1 1484709 D 228410 CDS NP_841410.1 30249340 1082313 1485388..1486110 1 NC_004757.1 hypothetical protein 1486110 1082313 NE1363 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841410.1 1485388 D 228410 CDS NP_841411.1 30249341 1082314 1486124..1487182 1 NC_004757.1 Appr-1-p processing enzyme 1487182 1082314 NE1364 Nitrosomonas europaea ATCC 19718 Appr-1-p processing enzyme NP_841411.1 1486124 D 228410 CDS NP_841412.1 30249342 1082315 1487564..1487899 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 1487899 1082315 NE1365 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_841412.1 1487564 D 228410 CDS NP_841413.1 30249343 1082316 1488439..1489134 1 NC_004757.1 hypothetical protein 1489134 1082316 NE1366 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841413.1 1488439 D 228410 CDS NP_841414.1 30249344 1082317 1489071..1489481 1 NC_004757.1 ISA0963-4 transposase 1489481 1082317 NE1367 Nitrosomonas europaea ATCC 19718 ISA0963-4 transposase NP_841414.1 1489071 D 228410 CDS NP_841415.1 30249345 1082319 complement(1490636..1492117) 1 NC_004757.1 glycosyl transferase family protein 1492117 1082319 NE1369 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_841415.1 1490636 R 228410 CDS NP_841416.1 30249346 1082320 complement(1492130..1495783) 1 NC_004757.1 glycosyl transferase family protein 1495783 1082320 NE1370 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_841416.1 1492130 R 228410 CDS NP_841417.1 30249347 1082321 1496257..1496469 1 NC_004757.1 hypothetical protein 1496469 1082321 NE1371 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841417.1 1496257 D 228410 CDS NP_841418.1 30249348 1082322 1496453..1496731 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 1496731 1082322 NE1372 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_841418.1 1496453 D 228410 CDS NP_841419.1 30249349 1082323 complement(1496762..1497166) 1 NC_004757.1 hypothetical protein 1497166 1082323 NE1373 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841419.1 1496762 R 228410 CDS NP_841420.1 30249350 1082324 complement(1497153..1497386) 1 NC_004757.1 hypothetical protein 1497386 1082324 NE1374 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841420.1 1497153 R 228410 CDS NP_841421.1 30249351 1082325 1497622..1497948 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 1497948 1082325 NE1375 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_841421.1 1497622 D 228410 CDS NP_841422.1 30249352 1082326 1497929..1498351 1 NC_004757.1 hypothetical protein 1498351 1082326 NE1376 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841422.1 1497929 D 228410 CDS NP_841423.1 30249353 1082327 1498593..1499024 1 NC_004757.1 hypothetical protein 1499024 1082327 NE1377 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841423.1 1498593 D 228410 CDS NP_841424.1 30249354 1082328 complement(1499301..1500344) 1 NC_004757.1 integrase catalytic subunit 1500344 1082328 NE1378 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841424.1 1499301 R 228410 CDS NP_841425.1 30249355 1082329 complement(1500454..1500939) 1 NC_004757.1 hypothetical protein 1500939 1082329 NE1379 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841425.1 1500454 R 228410 CDS NP_841426.1 30249356 1082330 complement(1500944..1501282) 1 NC_004757.1 hypothetical protein 1501282 1082330 NE1380 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841426.1 1500944 R 228410 CDS NP_841427.1 30249357 1082331 complement(1501279..1502232) 1 NC_004757.1 hypothetical protein 1502232 1082331 NE1381 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841427.1 1501279 R 228410 CDS NP_841428.1 30249358 1082332 complement(1503153..1503857) 1 NC_004757.1 ADP-glucose pyrophosphorylase 1503857 galU1 1082332 galU1 Nitrosomonas europaea ATCC 19718 ADP-glucose pyrophosphorylase NP_841428.1 1503153 R 228410 CDS NP_841429.1 30249359 1082333 complement(1503829..1504044) 1 NC_004757.1 UTP--glucose-1-phosphate uridylyltransferase protein 1504044 galU1 1082333 galU1 Nitrosomonas europaea ATCC 19718 UTP--glucose-1-phosphate uridylyltransferase protein NP_841429.1 1503829 R 228410 CDS NP_841430.1 30249360 1082334 complement(1504395..1505561) 1 NC_004757.1 chain length determinant protein 1505561 kpsE 1082334 kpsE Nitrosomonas europaea ATCC 19718 chain length determinant protein NP_841430.1 1504395 R 228410 CDS NP_841431.1 30249361 1082335 complement(1505558..1506220) 1 NC_004757.1 sugar ABC transporter ATPase 1506220 rkpS 1082335 rkpS Nitrosomonas europaea ATCC 19718 sugar ABC transporter ATPase NP_841431.1 1505558 R 228410 CDS NP_841432.1 30249362 1082336 complement(1506297..1507082) 1 NC_004757.1 ABC transporter 1507082 rkpT1 1082336 rkpT1 Nitrosomonas europaea ATCC 19718 ABC transporter NP_841432.1 1506297 R 228410 CDS NP_841433.1 30249363 1082337 complement(1507125..1508315) 1 NC_004757.1 polysaccharide export protein 1508315 1082337 NE1387 Nitrosomonas europaea ATCC 19718 polysaccharide export protein NP_841433.1 1507125 R 228410 CDS NP_841434.1 30249364 1082338 complement(1508342..1509676) 1 NC_004757.1 class-I aminotransferase 1509676 rkpG 1082338 rkpG Nitrosomonas europaea ATCC 19718 class-I aminotransferase NP_841434.1 1508342 R 228410 CDS NP_841435.1 30249365 1082339 complement(1509673..1517307) 1 NC_004757.1 similar to (AF285636) type I polyketide synthase WcbR [Burkholderia mallei], evalue=0.00e+00, 41% identity; type I polyketide synthase WcbR 1517307 rkpA 1082339 rkpA Nitrosomonas europaea ATCC 19718 type I polyketide synthase WcbR NP_841435.1 1509673 R 228410 CDS NP_841436.1 30249366 1082340 1517676..1518917 1 NC_004757.1 Serine/threonine specific protein phosphatase:exonuclease SbcD 1518917 sbcD 1082340 sbcD Nitrosomonas europaea ATCC 19718 Serine/threonine specific protein phosphatase:exonuclease SbcD NP_841436.1 1517676 D 228410 CDS NP_841437.1 30249367 1082342 1520301..1523564 1 NC_004757.1 ABC transporter ATPase 1523564 sbcC 1082342 sbcC Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_841437.1 1520301 D 228410 CDS NP_841438.1 30249368 1082347 1527334..1528857 1 NC_004757.1 chemotaxis protein CheW 1528857 1082347 NE1397 Nitrosomonas europaea ATCC 19718 chemotaxis protein CheW NP_841438.1 1527334 D 228410 CDS NP_841439.1 30249369 1082348 complement(1528877..1529620) 1 NC_004757.1 DNA polymerase-like protein 1529620 1082348 NE1398 Nitrosomonas europaea ATCC 19718 DNA polymerase-like protein NP_841439.1 1528877 R 228410 CDS NP_841440.1 30249370 1082349 complement(1529678..1530151) 1 NC_004757.1 N-acetyltransferase GCN5 1530151 1082349 NE1399 Nitrosomonas europaea ATCC 19718 N-acetyltransferase GCN5 NP_841440.1 1529678 R 228410 CDS NP_841441.1 30249371 1082350 complement(1530154..1530825) 1 NC_004757.1 glycoprotease 1530825 yeaZ 1082350 yeaZ Nitrosomonas europaea ATCC 19718 glycoprotease NP_841441.1 1530154 R 228410 CDS NP_841442.1 30249372 1082351 complement(1530806..1531381) 1 NC_004757.1 2'-5' RNA ligase 1531381 ligT 1082351 ligT Nitrosomonas europaea ATCC 19718 2'-5' RNA ligase NP_841442.1 1530806 R 228410 CDS NP_841443.1 30249373 1082352 complement(1531387..1531878) 1 NC_004757.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1531878 ispF 1082352 ispF Nitrosomonas europaea ATCC 19718 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NP_841443.1 1531387 R 228410 CDS NP_841444.1 30249374 1082353 complement(1532074..1532421) 1 NC_004757.1 uroporphyrin-III C-methyltransferase 1532421 1082353 NE1403 Nitrosomonas europaea ATCC 19718 uroporphyrin-III C-methyltransferase NP_841444.1 1532074 R 228410 CDS NP_841445.1 30249375 1082354 1532476..1533150 1 NC_004757.1 ABC transporter ATP-binding protein 1533150 1082354 NE1404 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein NP_841445.1 1532476 D 228410 CDS NP_841446.1 30249376 1082355 1533147..1535696 1 NC_004757.1 hypothetical protein 1535696 1082355 NE1405 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841446.1 1533147 D 228410 CDS NP_841447.1 30249377 1082356 1535696..1536766 1 NC_004757.1 AttH 1536766 1082356 NE1406 Nitrosomonas europaea ATCC 19718 AttH NP_841447.1 1535696 D 228410 CDS NP_841448.1 30249378 1082357 1536852..1537094 1 NC_004757.1 hypothetical protein 1537094 1082357 NE1407 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841448.1 1536852 D 228410 CDS NP_841449.1 30249379 1082358 complement(1537213..1538553) 1 NC_004757.1 sensory transduction histidine kinase 1538553 1082358 NE1408 Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_841449.1 1537213 R 228410 CDS NP_841450.1 30249380 1082359 complement(1538550..1539239) 1 NC_004757.1 response regulator PhoP 1539239 1082359 NE1409 Nitrosomonas europaea ATCC 19718 response regulator PhoP NP_841450.1 1538550 R 228410 CDS NP_841451.1 30249381 1082360 complement(1539382..1539672) 1 NC_004757.1 hypothetical protein 1539672 1082360 NE1410 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841451.1 1539382 R 228410 CDS NP_841452.1 30249382 1082361 1540634..1541458 1 NC_004757.1 similar to (AF073793) ammonia monooxygenase 3 subunit C [Nitrosomonas europaea], evalue=0.00e+00, 100% identity; ammonia monooxygenase 3 subunit C 1541458 amoC3 1082361 amoC3 Nitrosomonas europaea ATCC 19718 ammonia monooxygenase 3 subunit C NP_841452.1 1540634 D 228410 CDS NP_841453.1 30249383 1082362 complement(1541997..1542704) 1 NC_004757.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1542704 ispD 1082362 ispD Nitrosomonas europaea ATCC 19718 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP_841453.1 1541997 R 228410 CDS NP_841454.1 30249384 1082363 complement(1542741..1543661) 1 NC_004757.1 hypothetical protein 1543661 ftsX 1082363 ftsX Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841454.1 1542741 R 228410 CDS NP_841455.1 30249385 1082364 complement(1543658..1544320) 1 NC_004757.1 ABC transporter ATPase 1544320 ftsE 1082364 ftsE Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_841455.1 1543658 R 228410 CDS NP_841456.1 30249386 1082365 complement(1544349..1545386) 1 NC_004757.1 Signal recognition particle GTPase, FtsY protein 1545386 pilA 1082365 pilA Nitrosomonas europaea ATCC 19718 Signal recognition particle GTPase, FtsY protein NP_841456.1 1544349 R 228410 CDS NP_841457.1 30249387 1082366 1545453..1546841 1 NC_004757.1 insulinase family protein 1546841 1082366 NE1416 Nitrosomonas europaea ATCC 19718 insulinase family protein NP_841457.1 1545453 D 228410 CDS NP_841458.1 30249388 1082367 1546964..1548052 1 NC_004757.1 alanine racemase 1548052 dadX 1082367 dadX Nitrosomonas europaea ATCC 19718 alanine racemase NP_841458.1 1546964 D 228410 CDS NP_841459.1 30249389 1082368 complement(1548071..1548865) 1 NC_004757.1 PpiC-type peptidyl-prolyl cis-trans isomerase 1548865 1082368 NE1418 Nitrosomonas europaea ATCC 19718 PpiC-type peptidyl-prolyl cis-trans isomerase NP_841459.1 1548071 R 228410 CDS NP_841460.1 30249390 1082369 complement(1549022..1549324) 1 NC_004757.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 1549324 1082369 NE1419 Nitrosomonas europaea ATCC 19718 YciI-like protein NP_841460.1 1549022 R 228410 CDS NP_841461.1 30249391 1082370 complement(1549438..1550592) 1 NC_004757.1 similar to (AB049412) rubredoxin reductase [Acinetobacter sp. M-1], evalue=7.00e-91, 47% identity; rubredoxin reductase 1550592 1082370 NE1420 Nitrosomonas europaea ATCC 19718 rubredoxin reductase NP_841461.1 1549438 R 228410 CDS NP_841462.1 30249392 1082371 1550895..1551776 1 NC_004757.1 metalloprotease; heat shock protein HtpX 1551776 htpX 1082371 htpX Nitrosomonas europaea ATCC 19718 heat shock protein HtpX NP_841462.1 1550895 D 228410 CDS NP_841463.1 30249393 1082372 complement(1551849..1552628) 1 NC_004757.1 lipoprotein (vacJ) transmembrane 1552628 vacJ 1082372 vacJ Nitrosomonas europaea ATCC 19718 lipoprotein (vacJ) transmembrane NP_841463.1 1551849 R 228410 CDS NP_841464.1 30249394 1082373 complement(1552748..1554055) 1 NC_004757.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1554055 hemL 1082373 hemL Nitrosomonas europaea ATCC 19718 glutamate-1-semialdehyde aminotransferase NP_841464.1 1552748 R 228410 CDS NP_841465.1 30249395 1082374 complement(1554092..1554736) 1 NC_004757.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 1554736 thiE 1082374 thiE Nitrosomonas europaea ATCC 19718 thiamine-phosphate pyrophosphorylase NP_841465.1 1554092 R 228410 CDS NP_841466.1 30249396 1082375 complement(1554720..1555565) 1 NC_004757.1 phosphomethylpyrimidine kinase 1555565 thiD 1082375 thiD Nitrosomonas europaea ATCC 19718 phosphomethylpyrimidine kinase NP_841466.1 1554720 R 228410 CDS NP_841467.1 30249397 1082376 1555618..1555806 1 NC_004757.1 rubredoxin:rubredoxin-type Fe(Cys)4 protein 1555806 1082376 NE1426 Nitrosomonas europaea ATCC 19718 rubredoxin:rubredoxin-type Fe(Cys)4 protein NP_841467.1 1555618 D 228410 CDS NP_841468.1 30249398 1082377 1555806..1556195 1 NC_004757.1 gloA; lactoylglutathione lyase 1556195 gloA 1082377 gloA Nitrosomonas europaea ATCC 19718 gloA; lactoylglutathione lyase NP_841468.1 1555806 D 228410 CDS NP_841469.1 30249399 1082378 1556462..1556827 1 NC_004757.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 1556827 1082378 NE1428 Nitrosomonas europaea ATCC 19718 iron-sulfur cluster insertion protein ErpA NP_841469.1 1556462 D 228410 CDS NP_841470.1 30249400 1082379 complement(1556832..1557923) 1 NC_004757.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1557923 anmK 1082379 anmK Nitrosomonas europaea ATCC 19718 anhydro-N-acetylmuramic acid kinase NP_841470.1 1556832 R 228410 CDS NP_841471.1 30249401 1082380 complement(1557956..1559287) 1 NC_004757.1 M23/M37 familypeptidase 1559287 1082380 NE1430 Nitrosomonas europaea ATCC 19718 M23/M37 familypeptidase NP_841471.1 1557956 R 228410 CDS NP_841472.1 30249402 1082381 1559381..1560610 1 NC_004757.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1560610 1082381 NE1431 Nitrosomonas europaea ATCC 19718 tyrosyl-tRNA synthetase NP_841472.1 1559381 D 228410 CDS NP_841473.1 30249403 1082382 complement(1560726..1561205) 1 NC_004757.1 transcriptional regulator NrdR 1561205 nrdR 1082382 nrdR Nitrosomonas europaea ATCC 19718 transcriptional regulator NrdR NP_841473.1 1560726 R 228410 CDS NP_841474.1 30249404 1082383 complement(1561233..1562483) 1 NC_004757.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1562483 glyA 1082383 glyA Nitrosomonas europaea ATCC 19718 serine hydroxymethyltransferase NP_841474.1 1561233 R 228410 CDS NP_841475.1 30249405 1082384 1562690..1563430 1 NC_004757.1 coenzyme PQQ synthesis protein c 1563430 1082384 NE1434 Nitrosomonas europaea ATCC 19718 coenzyme PQQ synthesis protein c NP_841475.1 1562690 D 228410 CDS NP_841476.1 30249406 1082385 complement(1563479..1564453) 1 NC_004757.1 transcription regulator LysR 1564453 metR 1082385 metR Nitrosomonas europaea ATCC 19718 transcription regulator LysR NP_841476.1 1563479 R 228410 CDS NP_841477.1 30249407 1082386 1564554..1566830 1 NC_004757.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1566830 metE 1082386 metE Nitrosomonas europaea ATCC 19718 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase NP_841477.1 1564554 D 228410 CDS NP_841478.1 30249408 1082387 complement(1567139..1568353) 1 NC_004757.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1568353 argG 1082387 argG Nitrosomonas europaea ATCC 19718 argininosuccinate synthase NP_841478.1 1567139 R 228410 CDS NP_841479.1 30249409 1082388 complement(1568392..1569315) 1 NC_004757.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1569315 argF 1082388 argF Nitrosomonas europaea ATCC 19718 ornithine carbamoyltransferase NP_841479.1 1568392 R 228410 CDS NP_841480.1 30249410 1082389 complement(1569480..1570661) 1 NC_004757.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 1570661 argD 1082389 argD Nitrosomonas europaea ATCC 19718 acetylornithine aminotransferase NP_841480.1 1569480 R 228410 CDS NP_841481.1 30249411 1082390 complement(1570839..1571264) 1 NC_004757.1 hypothetical protein 1571264 1082390 NE1440 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841481.1 1570839 R 228410 CDS NP_841482.1 30249412 1082391 complement(1571310..1571552) 1 NC_004757.1 hypothetical protein 1571552 1082391 NE1441 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841482.1 1571310 R 228410 CDS NP_841483.1 30249413 1082392 complement(1571552..1573618) 1 NC_004757.1 hypothetical protein 1573618 1082392 NE1442 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841483.1 1571552 R 228410 CDS NP_841484.1 30249414 1082393 complement(1573624..1574511) 1 NC_004757.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 1574511 cysM 1082393 cysM Nitrosomonas europaea ATCC 19718 cysteine synthase B NP_841484.1 1573624 R 228410 CDS NP_841485.1 30249415 1082394 complement(1574740..1577529) 1 NC_004757.1 hypothetical protein 1577529 1082394 NE1444 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841485.1 1574740 R 228410 CDS NP_841486.1 30249416 1082395 complement(1578062..1578622) 1 NC_004757.1 nitrogen-fixing protein NifU 1578622 1082395 NE1445 Nitrosomonas europaea ATCC 19718 nitrogen-fixing protein NifU NP_841486.1 1578062 R 228410 CDS NP_841487.1 30249417 1082397 complement(1578628..1579107) 1 NC_004757.1 NifU-like domain-containing protein 1579107 1082397 NE1446 Nitrosomonas europaea ATCC 19718 NifU-like domain-containing protein NP_841487.1 1578628 R 228410 CDS NP_841488.1 30249418 1082398 complement(1579104..1580372) 1 NC_004757.1 aminotransferase class-V 1580372 1082398 NE1447 Nitrosomonas europaea ATCC 19718 aminotransferase class-V NP_841488.1 1579104 R 228410 CDS NP_841489.1 30249419 1082399 complement(1580376..1581683) 1 NC_004757.1 hypothetical protein 1581683 1082399 NE1448 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841489.1 1580376 R 228410 CDS NP_841490.1 30249420 1082400 complement(1581680..1582471) 1 NC_004757.1 Iron-regulated ABC transporter ATPase SufC 1582471 ycf16 1082400 ycf16 Nitrosomonas europaea ATCC 19718 Iron-regulated ABC transporter ATPase SufC NP_841490.1 1581680 R 228410 CDS NP_841491.1 30249421 1082401 complement(1582468..1583904) 1 NC_004757.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 1583904 1082401 NE1450 Nitrosomonas europaea ATCC 19718 cysteine desulfurase activator complex subunit SufB NP_841491.1 1582468 R 228410 CDS NP_841492.1 30249422 1082402 complement(1583926..1584255) 1 NC_004757.1 hesB/yadR/yfhF family protein 1584255 1082402 NE1451 Nitrosomonas europaea ATCC 19718 hesB/yadR/yfhF family protein NP_841492.1 1583926 R 228410 CDS NP_841493.1 30249423 1082403 complement(1584280..1584759) 1 NC_004757.1 hypothetical protein 1584759 1082403 NE1452 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841493.1 1584280 R 228410 CDS NP_841494.1 30249424 1082404 complement(1585050..1587554) 1 NC_004757.1 hypothetical protein 1587554 1082404 NE1453 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841494.1 1585050 R 228410 CDS NP_841495.1 30249425 1082405 complement(1587614..1588288) 1 NC_004757.1 ABC transporter ATPase 1588288 1082405 NE1454 Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_841495.1 1587614 R 228410 CDS NP_841496.1 30249426 1082406 1588323..1589009 1 NC_004757.1 GDSL lipolytic enzyme 1589009 1082406 NE1455 Nitrosomonas europaea ATCC 19718 GDSL lipolytic enzyme NP_841496.1 1588323 D 228410 CDS NP_841497.1 30249427 1082407 complement(1589056..1590087) 1 NC_004757.1 rluC; ribosomal large subunit pseudouridine synthase C 1590087 rluC 1082407 rluC Nitrosomonas europaea ATCC 19718 rluC; ribosomal large subunit pseudouridine synthase C NP_841497.1 1589056 R 228410 CDS NP_841498.1 30249428 1082408 1590529..1593090 1 NC_004757.1 ribonuclease G and E 1593090 1082408 NE1457 Nitrosomonas europaea ATCC 19718 ribonuclease G and E NP_841498.1 1590529 D 228410 CDS NP_841499.1 30249429 1082409 complement(1593227..1594183) 1 NC_004757.1 phage integrase domain/SAM domain-containing protein 1594183 xerD 1082409 xerD Nitrosomonas europaea ATCC 19718 phage integrase domain/SAM domain-containing protein NP_841499.1 1593227 R 228410 CDS NP_841500.1 30249430 1082410 complement(1594289..1595119) 1 NC_004757.1 transmembrane protein 1595119 1082410 NE1459 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841500.1 1594289 R 228410 CDS NP_841501.1 30249431 1082411 1595257..1596603 1 NC_004757.1 Signal recognition particle GTPase ffh protein 1596603 ffh 1082411 ffh Nitrosomonas europaea ATCC 19718 Signal recognition particle GTPase ffh protein NP_841501.1 1595257 D 228410 CDS NP_841502.1 30249432 1082412 complement(1596642..1597085) 1 NC_004757.1 hypothetical protein 1597085 1082412 NE1461 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841502.1 1596642 R 228410 CDS NP_841503.1 30249433 1082413 complement(1597079..1597528) 1 NC_004757.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 1597528 dut 1082413 dut Nitrosomonas europaea ATCC 19718 deoxyuridine 5'-triphosphate nucleotidohydrolase NP_841503.1 1597079 R 228410 CDS NP_841504.1 30249434 1082414 complement(1597515..1598744) 1 NC_004757.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1598744 dfp 1082414 dfp Nitrosomonas europaea ATCC 19718 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase NP_841504.1 1597515 R 228410 CDS NP_841505.1 30249435 1082415 1598891..1599565 1 NC_004757.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 1599565 radC 1082415 radC Nitrosomonas europaea ATCC 19718 DNA repair protein RadC NP_841505.1 1598891 D 228410 CDS NP_841506.1 30249436 1082416 1599634..1599870 1 NC_004757.1 required for 70S ribosome assembly; 50S ribosomal protein L28 1599870 rpmB 1082416 rpmB Nitrosomonas europaea ATCC 19718 50S ribosomal protein L28 NP_841506.1 1599634 D 228410 CDS NP_841507.1 30249437 1082417 1599908..1600063 1 NC_004757.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1600063 rpmG 1082417 rpmG Nitrosomonas europaea ATCC 19718 50S ribosomal protein L33 NP_841507.1 1599908 D 228410 CDS NP_841508.1 30249438 1082418 complement(1600138..1601334) 1 NC_004757.1 Fatty acid desaturase, type 2:Fatty acid desaturase, type 1 1601334 1082418 NE1467 Nitrosomonas europaea ATCC 19718 Fatty acid desaturase, type 2:Fatty acid desaturase, type 1 NP_841508.1 1600138 R 228410 CDS NP_841509.1 30249439 1082419 complement(1601478..1604216) 1 NC_004757.1 polA; DNA polymerase I protein 1604216 polA 1082419 polA Nitrosomonas europaea ATCC 19718 polA; DNA polymerase I protein NP_841509.1 1601478 R 228410 CDS NP_841510.1 30249440 1082420 1604232..1604951 1 NC_004757.1 hypothetical protein 1604951 1082420 NE1469 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841510.1 1604232 D 228410 CDS NP_841511.1 30249441 1082421 1605011..1605394 1 NC_004757.1 hypothetical protein 1605394 1082421 NE1470 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841511.1 1605011 D 228410 CDS NP_841512.1 30249442 1082422 1605478..1606428 1 NC_004757.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 1606428 thrB 1082422 thrB Nitrosomonas europaea ATCC 19718 homoserine kinase NP_841512.1 1605478 D 228410 CDS NP_841513.1 30249443 1082423 1606550..1607341 1 NC_004757.1 transmembrane protein 1607341 1082423 NE1472 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841513.1 1606550 D 228410 CDS NP_841514.1 30249444 1082424 complement(1607429..1609663) 1 NC_004757.1 UvrD/REP helicase 1609663 uvrD 1082424 uvrD Nitrosomonas europaea ATCC 19718 UvrD/REP helicase NP_841514.1 1607429 R 228410 CDS NP_841515.1 30249445 1082425 complement(1609724..1610593) 1 NC_004757.1 phosphoribulokinase 1610593 cbbP 1082425 cbbP Nitrosomonas europaea ATCC 19718 phosphoribulokinase NP_841515.1 1609724 R 228410 CDS NP_841516.1 30249446 1082426 complement(1610710..1611504) 1 NC_004757.1 hypothetical protein 1611504 1082426 NE1475 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841516.1 1610710 R 228410 CDS NP_841517.1 30249447 1082427 complement(1611604..1612698) 1 NC_004757.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1612698 hemH 1082427 hemH Nitrosomonas europaea ATCC 19718 ferrochelatase NP_841517.1 1611604 R 228410 CDS NP_841518.1 30249448 1082428 complement(1612723..1613739) 1 NC_004757.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 1613739 hrcA 1082428 hrcA Nitrosomonas europaea ATCC 19718 heat-inducible transcription repressor NP_841518.1 1612723 R 228410 CDS NP_841519.1 30249449 1082429 1613957..1614847 1 NC_004757.1 catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 1614847 ppnK 1082429 ppnK Nitrosomonas europaea ATCC 19718 NAD(+)/NADH kinase family protein NP_841519.1 1613957 D 228410 CDS NP_841520.1 30249450 1082430 1614853..1616538 1 NC_004757.1 DNA repair protein RecN 1616538 recN 1082430 recN Nitrosomonas europaea ATCC 19718 DNA repair protein RecN NP_841520.1 1614853 D 228410 CDS NP_841521.1 30249451 1082431 complement(1616568..1616999) 1 NC_004757.1 hypothetical protein 1616999 1082431 NE1480 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841521.1 1616568 R 228410 CDS NP_841522.1 30249452 1082432 complement(1616980..1617753) 1 NC_004757.1 hypothetical protein 1617753 1082432 NE1481 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841522.1 1616980 R 228410 CDS NP_841523.1 30249453 1082433 complement(1617850..1618878) 1 NC_004757.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1618878 argC 1082433 argC Nitrosomonas europaea ATCC 19718 N-acetyl-gamma-glutamyl-phosphate reductase NP_841523.1 1617850 R 228410 CDS NP_841524.1 30249454 1082434 complement(1619020..1619412) 1 NC_004757.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1619412 rpsI 1082434 rpsI Nitrosomonas europaea ATCC 19718 30S ribosomal protein S9 NP_841524.1 1619020 R 228410 CDS NP_841525.1 30249455 1082435 complement(1619424..1619858) 1 NC_004757.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1619858 rplM 1082435 rplM Nitrosomonas europaea ATCC 19718 50S ribosomal protein L13 NP_841525.1 1619424 R 228410 CDS NP_841526.1 30249456 1082436 1620047..1621204 1 NC_004757.1 D-alanyl-D-alanine carboxypeptidase 1621204 dac 1082436 dac Nitrosomonas europaea ATCC 19718 D-alanyl-D-alanine carboxypeptidase NP_841526.1 1620047 D 228410 CDS NP_841527.1 30249457 1082437 1621228..1622088 1 NC_004757.1 class IV aminotransferase 1622088 1082437 NE1486 Nitrosomonas europaea ATCC 19718 class IV aminotransferase NP_841527.1 1621228 D 228410 CDS NP_841528.1 30249458 1082438 1622098..1622361 1 NC_004757.1 hypothetical protein 1622361 1082438 NE1487 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841528.1 1622098 D 228410 CDS NP_841529.1 30249459 1082439 1622623..1623237 1 NC_004757.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1623237 lipB 1082439 lipB Nitrosomonas europaea ATCC 19718 lipoate-protein ligase B NP_841529.1 1622623 D 228410 CDS NP_841530.1 30249460 1082440 1623257..1624201 1 NC_004757.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1624201 lipA 1082440 lipA Nitrosomonas europaea ATCC 19718 lipoyl synthase NP_841530.1 1623257 D 228410 CDS NP_841531.1 30249461 1082441 complement(1624235..1625179) 1 NC_004757.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 1625179 1082441 NE1490 Nitrosomonas europaea ATCC 19718 C32 tRNA thiolase NP_841531.1 1624235 R 228410 CDS NP_841532.1 30249462 1082442 1625318..1625782 1 NC_004757.1 copper-containing oxidoreductase signal peptide protein 1625782 1082442 NE1491 Nitrosomonas europaea ATCC 19718 copper-containing oxidoreductase signal peptide protein NP_841532.1 1625318 D 228410 CDS NP_841533.1 30249463 1082443 1625779..1626306 1 NC_004757.1 hypothetical protein 1626306 1082443 NE1492 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841533.1 1625779 D 228410 CDS NP_841534.1 30249464 1082444 1626308..1626799 1 NC_004757.1 cytochrome c, class IC:cytochrome c, class I 1626799 1082444 NE1493 Nitrosomonas europaea ATCC 19718 cytochrome c, class IC:cytochrome c, class I NP_841534.1 1626308 D 228410 CDS NP_841535.1 30249465 1082445 1627279..1628796 1 NC_004757.1 hypothetical protein 1628796 1082445 NE1494 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841535.1 1627279 D 228410 CDS NP_841536.1 30249466 1082446 1628796..1629545 1 NC_004757.1 ParA family ATPase 1629545 soj 1082446 soj Nitrosomonas europaea ATCC 19718 ParA family ATPase NP_841536.1 1628796 D 228410 CDS NP_841537.1 30249467 1082447 1629542..1629997 1 NC_004757.1 hypothetical protein 1629997 1082447 NE1496 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841537.1 1629542 D 228410 CDS NP_841538.1 30249468 1082449 complement(1630491..1630706) 1 NC_004757.1 hypothetical protein 1630706 1082449 NE1497 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841538.1 1630491 R 228410 CDS NP_841539.1 30249469 1082450 1630860..1632278 1 NC_004757.1 homospermidine synthase protein 1632278 hss 1082450 hss Nitrosomonas europaea ATCC 19718 homospermidine synthase protein NP_841539.1 1630860 D 228410 CDS NP_841540.1 30249470 1082451 complement(1632376..1632759) 1 NC_004757.1 hypothetical protein 1632759 1082451 NE1499 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841540.1 1632376 R 228410 CDS NP_841541.1 30249471 1082452 complement(1632762..1633238) 1 NC_004757.1 hypothetical protein 1633238 1082452 NE1500 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841541.1 1632762 R 228410 CDS NP_841542.1 30249472 1082453 complement(1633286..1633630) 1 NC_004757.1 hypothetical protein 1633630 1082453 NE1501 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841542.1 1633286 R 228410 CDS NP_841543.1 30249473 1082454 complement(1633721..1634554) 1 NC_004757.1 hypothetical protein 1634554 1082454 NE1502 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841543.1 1633721 R 228410 CDS NP_841544.1 30249474 1082455 complement(1634608..1635714) 1 NC_004757.1 Rieske iron-sulfur protein 2Fe-2S subunit 1635714 1082455 NE1503 Nitrosomonas europaea ATCC 19718 Rieske iron-sulfur protein 2Fe-2S subunit NP_841544.1 1634608 R 228410 CDS NP_841545.1 30249475 1082456 1636101..1637483 1 NC_004757.1 hypothetical protein 1637483 1082456 NE1504 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841545.1 1636101 D 228410 CDS NP_841546.1 30249476 1082457 1637569..1639761 1 NC_004757.1 priA; primosomal protein N' (replication factor Y) 1639761 priA 1082457 priA Nitrosomonas europaea ATCC 19718 priA; primosomal protein N' (replication factor Y) NP_841546.1 1637569 D 228410 CDS NP_841547.1 30249477 1082458 complement(1639794..1640240) 1 NC_004757.1 universal stress protein 1640240 1082458 NE1506 Nitrosomonas europaea ATCC 19718 universal stress protein NP_841547.1 1639794 R 228410 CDS NP_841548.1 30249478 1082459 complement(1640298..1641950) 1 NC_004757.1 hypothetical protein 1641950 1082459 NE1507 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841548.1 1640298 R 228410 CDS NP_841549.1 30249479 1082460 complement(1641958..1643091) 1 NC_004757.1 htra-like serine protease signal peptide protein 1643091 1082460 NE1508 Nitrosomonas europaea ATCC 19718 htra-like serine protease signal peptide protein NP_841549.1 1641958 R 228410 CDS NP_841550.1 30249480 1082461 1643129..1643875 1 NC_004757.1 hypothetical protein 1643875 1082461 NE1509 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841550.1 1643129 D 228410 CDS NP_841551.1 30249481 1082462 1644016..1645338 1 NC_004757.1 membrane-bound lytic murein transglycosylase A transmembrane protein 1645338 1082462 NE1510 Nitrosomonas europaea ATCC 19718 membrane-bound lytic murein transglycosylase A transmembrane protein NP_841551.1 1644016 D 228410 CDS NP_841552.1 30249482 1082463 complement(1645372..1646085) 1 NC_004757.1 hypothetical protein 1646085 dsbC 1082463 dsbC Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841552.1 1645372 R 228410 CDS NP_841553.1 30249483 1082464 complement(1646129..1647295) 1 NC_004757.1 ubiquinone biosynthesis hydroxylase family protein 1647295 1082464 NE1512 Nitrosomonas europaea ATCC 19718 ubiquinone biosynthesis hydroxylase family protein NP_841553.1 1646129 R 228410 CDS NP_841554.1 30249484 1082465 complement(1647543..1647998) 1 NC_004757.1 hypothetical protein 1647998 1082465 NE1513 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841554.1 1647543 R 228410 CDS NP_841555.1 30249485 1082466 1648045..1649091 1 NC_004757.1 glycine cleavage T-protein (aminomethyl transferase) 1649091 1082466 NE1514 Nitrosomonas europaea ATCC 19718 glycine cleavage T-protein (aminomethyl transferase) NP_841555.1 1648045 D 228410 CDS NP_841556.1 30249486 1082467 complement(1649156..1649815) 1 NC_004757.1 ankyrin repeat-containing protein 1649815 1082467 NE1515 Nitrosomonas europaea ATCC 19718 ankyrin repeat-containing protein NP_841556.1 1649156 R 228410 CDS NP_841557.1 30249487 1082468 complement(1649817..1650581) 1 NC_004757.1 hypothetical protein 1650581 1082468 NE1516 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841557.1 1649817 R 228410 CDS NP_841558.1 30249488 1082469 complement(1650652..1651134) 1 NC_004757.1 6-pyruvoyl-tetrahydropterin synthase 1651134 1082469 NE1517 Nitrosomonas europaea ATCC 19718 6-pyruvoyl-tetrahydropterin synthase NP_841558.1 1650652 R 228410 CDS NP_841559.1 30249489 1082470 1651172..1652011 1 NC_004757.1 hypothetical protein 1652011 1082470 NE1518 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841559.1 1651172 D 228410 CDS NP_841560.1 30249490 1082471 complement(1652040..1652327) 1 NC_004757.1 hypothetical protein 1652327 1082471 NE1519 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841560.1 1652040 R 228410 CDS NP_841561.1 30249491 1082473 1653402..1653875 1 NC_004757.1 transposase 1653875 1082473 NE1521 Nitrosomonas europaea ATCC 19718 transposase NP_841561.1 1653402 D 228410 CDS NP_841562.1 30249492 1082474 1653797..1654165 1 NC_004757.1 IS4 family transposase 1654165 1082474 NE1522 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_841562.1 1653797 D 228410 CDS NP_841563.1 30249493 1082475 1654581..1655624 1 NC_004757.1 integrase catalytic subunit 1655624 1082475 NE1523 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841563.1 1654581 D 228410 CDS NP_841564.1 30249494 1082476 1655769..1656143 1 NC_004757.1 hypothetical protein 1656143 1082476 NE1524 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841564.1 1655769 D 228410 CDS NP_841565.1 30249495 1082477 1656147..1656368 1 NC_004757.1 plasmid stabilization protein ParE 1656368 1082477 NE1525 Nitrosomonas europaea ATCC 19718 plasmid stabilization protein ParE NP_841565.1 1656147 D 228410 CDS NP_841566.1 30249496 1082478 1656579..1656917 1 NC_004757.1 hypothetical protein 1656917 1082478 NE1526 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841566.1 1656579 D 228410 CDS NP_841567.1 30249497 1082479 complement(1656957..1658159) 1 NC_004757.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1658159 1082479 NE1527 Nitrosomonas europaea ATCC 19718 acetyl-CoA acetyltransferase NP_841567.1 1656957 R 228410 CDS NP_841568.1 30249498 1082480 complement(1658229..1660739) 1 NC_004757.1 3-hydroxyacyl-CoA dehydrogenase 1660739 1082480 NE1528 Nitrosomonas europaea ATCC 19718 3-hydroxyacyl-CoA dehydrogenase NP_841568.1 1658229 R 228410 CDS NP_841569.1 30249499 1082481 complement(1661067..1661564) 1 NC_004757.1 signal peptide protein 1661564 1082481 NE1529 Nitrosomonas europaea ATCC 19718 signal peptide protein NP_841569.1 1661067 R 228410 CDS NP_841570.1 30249500 1082482 complement(1661561..1662799) 1 NC_004757.1 signal peptide protein 1662799 1082482 NE1530 Nitrosomonas europaea ATCC 19718 signal peptide protein NP_841570.1 1661561 R 228410 CDS NP_841571.1 30249501 1082483 complement(1662877..1665003) 1 NC_004757.1 TonB-dependent receptor protein 1665003 1082483 NE1531 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841571.1 1662877 R 228410 CDS NP_841572.1 30249502 1082484 complement(1665234..1667357) 1 NC_004757.1 TonB-dependent receptor protein 1667357 1082484 NE1532 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841572.1 1665234 R 228410 CDS NP_841573.1 30249503 1082485 complement(1667659..1668963) 1 NC_004757.1 catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 1668963 1082485 NE1533 Nitrosomonas europaea ATCC 19718 aminopeptidase 2 NP_841573.1 1667659 R 228410 CDS NP_841574.1 30249504 1082486 complement(1669151..1669285) 1 NC_004757.1 hypothetical protein 1669285 1082486 NE1534 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841574.1 1669151 R 228410 CDS NP_841575.1 30249505 1082487 complement(1669482..1669862) 1 NC_004757.1 DNA polymerase beta-like protein 1669862 1082487 NE1535 Nitrosomonas europaea ATCC 19718 DNA polymerase beta-like protein NP_841575.1 1669482 R 228410 CDS NP_841576.1 30249506 1082488 complement(1669973..1672525) 1 NC_004757.1 TonB-dependent receptor protein 1672525 1082488 NE1536 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841576.1 1669973 R 228410 CDS NP_841577.1 30249507 1082489 complement(1672634..1673875) 1 NC_004757.1 BNR repeat-containing protein 1673875 1082489 NE1537 Nitrosomonas europaea ATCC 19718 BNR repeat-containing protein NP_841577.1 1672634 R 228410 CDS NP_841578.1 30249508 1082490 1674096..1675415 1 NC_004757.1 hypothetical protein 1675415 1082490 NE1538 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841578.1 1674096 D 228410 CDS NP_841579.1 30249509 1082491 1675495..1677216 1 NC_004757.1 hypothetical protein 1677216 1082491 NE1539 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841579.1 1675495 D 228410 CDS NP_841580.1 30249510 1082492 1677349..1679442 1 NC_004757.1 TonB-dependent receptor protein 1679442 1082492 NE1540 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_841580.1 1677349 D 228410 CDS NP_841581.1 30249511 1082493 1679562..1679759 1 NC_004757.1 hypothetical protein 1679759 1082493 NE1541 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841581.1 1679562 D 228410 CDS NP_841582.1 30249512 1082494 1679912..1680655 1 NC_004757.1 hypothetical protein 1680655 1082494 NE1542 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841582.1 1679912 D 228410 CDS NP_841583.1 30249513 1082495 1680757..1681752 1 NC_004757.1 multicopper oxidase type 1 1681752 Heph 1082495 Heph Nitrosomonas europaea ATCC 19718 multicopper oxidase type 1 NP_841583.1 1680757 D 228410 CDS NP_841584.1 30249514 1082496 complement(1681762..1682679) 1 NC_004757.1 transcription regulator LysR 1682679 1082496 NE1544 Nitrosomonas europaea ATCC 19718 transcription regulator LysR NP_841584.1 1681762 R 228410 CDS NP_841585.1 30249515 1082497 1682810..1683676 1 NC_004757.1 hypothetical protein 1683676 1082497 NE1545 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841585.1 1682810 D 228410 CDS NP_841586.1 30249516 1082498 1683655..1684086 1 NC_004757.1 hypothetical protein 1684086 1082498 NE1546 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841586.1 1683655 D 228410 CDS NP_841587.1 30249517 1082499 complement(1684167..1684418) 1 NC_004757.1 hypothetical protein 1684418 1082499 NE1547 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841587.1 1684167 R 228410 CDS NP_841588.1 30249518 1082500 1684529..1686862 1 NC_004757.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1686862 fadE 1082500 fadE Nitrosomonas europaea ATCC 19718 acyl-CoA dehydrogenase NP_841588.1 1684529 D 228410 CDS NP_841589.1 30249519 1082501 1686859..1688697 1 NC_004757.1 AMP-dependent synthetase and ligase 1688697 1082501 NE1549 Nitrosomonas europaea ATCC 19718 AMP-dependent synthetase and ligase NP_841589.1 1686859 D 228410 CDS NP_841590.1 30249520 1082502 1688817..1689293 1 NC_004757.1 hypothetical protein 1689293 1082502 NE1550 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841590.1 1688817 D 228410 CDS NP_841591.1 30249521 1082503 1689298..1689594 1 NC_004757.1 hypothetical protein 1689594 1082503 NE1551 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841591.1 1689298 D 228410 CDS NP_841592.1 30249522 1082504 complement(1690373..1690741) 1 NC_004757.1 IS4 family transposase 1690741 1082504 NE1552 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_841592.1 1690373 R 228410 CDS NP_841593.1 30249523 1082505 complement(1690663..1691136) 1 NC_004757.1 transposase 1691136 1082505 NE1553 Nitrosomonas europaea ATCC 19718 transposase NP_841593.1 1690663 R 228410 CDS NP_841594.1 30249524 1082507 1691555..1692085 1 NC_004757.1 hypothetical protein 1692085 1082507 NE1555 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841594.1 1691555 D 228410 CDS NP_841595.1 30249525 1082508 1692108..1692632 1 NC_004757.1 hypothetical protein 1692632 1082508 NE1556 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841595.1 1692108 D 228410 CDS NP_841596.1 30249526 1082509 1692646..1693005 1 NC_004757.1 transposase 1693005 1082509 NE1557 Nitrosomonas europaea ATCC 19718 transposase NP_841596.1 1692646 D 228410 CDS NP_841597.1 30249527 1082510 1693067..1693480 1 NC_004757.1 transposase 1693480 1082510 NE1558 Nitrosomonas europaea ATCC 19718 transposase NP_841597.1 1693067 D 228410 CDS NP_841598.1 30249528 1082511 1693557..1693973 1 NC_004757.1 hypothetical protein 1693973 1082511 NE1559 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841598.1 1693557 D 228410 CDS NP_841599.1 30249529 1082512 1694061..1694564 1 NC_004757.1 hypothetical protein 1694564 1082512 NE1560 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841599.1 1694061 D 228410 CDS NP_841600.1 30249530 1082513 1694663..1694980 1 NC_004757.1 hypothetical protein 1694980 1082513 NE1561 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841600.1 1694663 D 228410 CDS NP_841601.1 30249531 1082514 1695137..1695388 1 NC_004757.1 hypothetical protein 1695388 1082514 NE1562 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841601.1 1695137 D 228410 CDS NP_841602.1 30249532 1082515 1695378..1695668 1 NC_004757.1 hypothetical protein 1695668 1082515 NE1563 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841602.1 1695378 D 228410 CDS NP_841603.1 30249533 1082516 1695725..1696417 1 NC_004757.1 hypothetical protein 1696417 1082516 NE1564 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841603.1 1695725 D 228410 CDS NP_841604.1 30249534 1082517 1696712..1698025 1 NC_004757.1 hypothetical protein 1698025 1082517 NE1565 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841604.1 1696712 D 228410 CDS NP_841605.1 30249535 1082518 1698027..1699199 1 NC_004757.1 hypothetical protein 1699199 1082518 NE1566 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841605.1 1698027 D 228410 CDS NP_841606.1 30249536 1082519 complement(1699292..1700128) 1 NC_004757.1 short-chain dehydrogenase/reductase 1700128 kduD 1082519 kduD Nitrosomonas europaea ATCC 19718 short-chain dehydrogenase/reductase NP_841606.1 1699292 R 228410 CDS NP_841607.1 30249537 1082520 complement(1700125..1701126) 1 NC_004757.1 oxidoreductase 1701126 1082520 NE1568 Nitrosomonas europaea ATCC 19718 oxidoreductase NP_841607.1 1700125 R 228410 CDS NP_841608.1 30249538 1082521 complement(1701123..1701839) 1 NC_004757.1 cytidylyltransferase (CMP-NeuAc synthetase) 1701839 neuA1 1082521 neuA1 Nitrosomonas europaea ATCC 19718 cytidylyltransferase (CMP-NeuAc synthetase) NP_841608.1 1701123 R 228410 CDS NP_841609.1 30249539 1082522 1702243..1704492 1 NC_004757.1 type III antifreeze protein 1704492 1082522 NE1570 Nitrosomonas europaea ATCC 19718 type III antifreeze protein NP_841609.1 1702243 D 228410 CDS NP_841610.1 30249540 1082523 1704666..1706081 1 NC_004757.1 hypothetical protein 1706081 1082523 NE1571 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841610.1 1704666 D 228410 CDS NP_841611.1 30249541 1082524 complement(1706215..1706961) 1 NC_004757.1 uroporphyrin-III C/tetrapyrrole methyltransferase 1706961 1082524 NE1572 Nitrosomonas europaea ATCC 19718 uroporphyrin-III C/tetrapyrrole methyltransferase NP_841611.1 1706215 R 228410 CDS NP_841612.1 30249542 1082525 complement(1706972..1707355) 1 NC_004757.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 1707355 apaG 1082525 apaG Nitrosomonas europaea ATCC 19718 ApaG protein NP_841612.1 1706972 R 228410 CDS NP_841613.1 30249543 1082526 1707701..1709830 1 NC_004757.1 serine protease 1709830 1082526 NE1574 Nitrosomonas europaea ATCC 19718 serine protease NP_841613.1 1707701 D 228410 CDS NP_841614.1 30249544 1082527 1710027..1710614 1 NC_004757.1 hypothetical protein 1710614 1082527 NE1575 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841614.1 1710027 D 228410 CDS NP_841615.1 30249545 1082528 1710797..1711057 1 NC_004757.1 hypothetical protein 1711057 1082528 NE1576 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841615.1 1710797 D 228410 CDS NP_841616.1 30249546 1082529 complement(1711067..1711363) 1 NC_004757.1 hypothetical protein 1711363 1082529 NE1577 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841616.1 1711067 R 228410 CDS NP_841617.1 30249547 1082530 complement(1711360..1711641) 1 NC_004757.1 hypothetical protein 1711641 1082530 NE1578 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841617.1 1711360 R 228410 CDS NP_841618.1 30249548 1082531 complement(1712013..1712351) 1 NC_004757.1 PemK-like protein 1712351 1082531 NE1579 Nitrosomonas europaea ATCC 19718 PemK-like protein NP_841618.1 1712013 R 228410 CDS NP_841619.1 30249549 1082532 complement(1712336..1712578) 1 NC_004757.1 CopG family transcriptional regulator 1712578 1082532 NE1580 Nitrosomonas europaea ATCC 19718 CopG family transcriptional regulator NP_841619.1 1712336 R 228410 CDS NP_841620.1 30249550 1082533 complement(1712785..1713213) 1 NC_004757.1 PilT domain-containing protein 1713213 1082533 NE1581 Nitrosomonas europaea ATCC 19718 PilT domain-containing protein NP_841620.1 1712785 R 228410 CDS NP_841621.1 30249551 1082534 complement(1713210..1713464) 1 NC_004757.1 plasmid stability protein 1713464 1082534 NE1582 Nitrosomonas europaea ATCC 19718 plasmid stability protein NP_841621.1 1713210 R 228410 CDS NP_841622.1 30249552 1082535 1714058..1714306 1 NC_004757.1 hypothetical protein 1714306 1082535 NE1583 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841622.1 1714058 D 228410 CDS NP_841623.1 30249553 1082536 1714296..1714592 1 NC_004757.1 hypothetical protein 1714592 1082536 NE1584 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841623.1 1714296 D 228410 CDS NP_841624.1 30249554 1082537 complement(1714952..1715527) 1 NC_004757.1 IS4 family transposase 1715527 1082537 NE1585 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_841624.1 1714952 R 228410 CDS NP_841625.1 30249555 1082538 complement(1715332..1715700) 1 NC_004757.1 transposase 1715700 1082538 NE1586 Nitrosomonas europaea ATCC 19718 transposase NP_841625.1 1715332 R 228410 CDS NP_841626.1 30249556 1082539 complement(1715875..1716246) 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 1716246 1082539 NE1587 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_841626.1 1715875 R 228410 CDS NP_841627.1 30249557 1082540 complement(1716263..1716565) 1 NC_004757.1 hypothetical protein 1716565 1082540 NE1588 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841627.1 1716263 R 228410 CDS NP_841628.1 30249558 1082541 complement(1717946..1718353) 1 NC_004757.1 hypothetical protein 1718353 1082541 NE1589 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841628.1 1717946 R 228410 CDS NP_841629.1 30249559 1082542 complement(1718350..1718652) 1 NC_004757.1 hypothetical protein 1718652 1082542 NE1590 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841629.1 1718350 R 228410 CDS NP_841630.1 30249560 1082543 complement(1719177..1719473) 1 NC_004757.1 hypothetical protein 1719473 1082543 NE1591 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841630.1 1719177 R 228410 CDS NP_841631.1 30249561 1082544 complement(1719470..1719712) 1 NC_004757.1 hypothetical protein 1719712 1082544 NE1592 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841631.1 1719470 R 228410 CDS NP_841632.1 30249562 1082545 1720228..1721055 1 NC_004757.1 flagellin 1721055 hag 1082545 hag Nitrosomonas europaea ATCC 19718 flagellin NP_841632.1 1720228 D 228410 CDS NP_841633.1 30249563 1082546 1721226..1721582 1 NC_004757.1 hypothetical protein 1721582 1082546 NE1594 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841633.1 1721226 D 228410 CDS NP_841634.1 30249564 1082547 1721745..1723190 1 NC_004757.1 flagellar hook-associated protein 2 1723190 fliD 1082547 fliD Nitrosomonas europaea ATCC 19718 flagellar hook-associated protein 2 NP_841634.1 1721745 D 228410 CDS NP_841635.1 30249565 1082548 1723237..1723707 1 NC_004757.1 flagellar protein FliS 1723707 fliS 1082548 fliS Nitrosomonas europaea ATCC 19718 flagellar protein FliS NP_841635.1 1723237 D 228410 CDS NP_841636.1 30249566 1082549 1723704..1724075 1 NC_004757.1 hypothetical protein 1724075 1082549 NE1597 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841636.1 1723704 D 228410 CDS NP_841637.1 30249567 1082550 1724620..1724877 1 NC_004757.1 hypothetical protein 1724877 1082550 NE1598 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841637.1 1724620 D 228410 CDS NP_841638.1 30249568 1082551 1724881..1725156 1 NC_004757.1 hypothetical protein 1725156 1082551 NE1599 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841638.1 1724881 D 228410 CDS NP_841639.1 30249569 1082552 complement(1725475..1727184) 1 NC_004757.1 hypothetical protein 1727184 1082552 NE1600 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841639.1 1725475 R 228410 CDS NP_841640.1 30249570 1082553 complement(1727358..1728002) 1 NC_004757.1 transmembrane protein 1728002 1082553 NE1601 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841640.1 1727358 R 228410 CDS NP_841641.1 30249571 1082554 complement(1727996..1728433) 1 NC_004757.1 general secretion pathway protein G 1728433 1082554 NE1602 Nitrosomonas europaea ATCC 19718 general secretion pathway protein G NP_841641.1 1727996 R 228410 CDS NP_841642.1 30249572 1082555 complement(1728427..1728909) 1 NC_004757.1 similar to (NC_003296) GENERAL SECRETION PATHWAY GSPG RELATED TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] evalue=4.00e-46, 53% identity; general secretion pathway gspG related transmembrane protein 1728909 1082555 NE1603 Nitrosomonas europaea ATCC 19718 general secretion pathway gspG related transmembrane protein NP_841642.1 1728427 R 228410 CDS NP_841643.1 30249573 1082556 complement(1728939..1731230) 1 NC_004757.1 general (type II) secretion pathway (GSP) D protein 1731230 1082556 NE1604 Nitrosomonas europaea ATCC 19718 general (type II) secretion pathway (GSP) D protein NP_841643.1 1728939 R 228410 CDS NP_841644.1 30249574 1082557 complement(1731343..1731912) 1 NC_004757.1 prolin-rich transmembrane protein 1731912 1082557 NE1605 Nitrosomonas europaea ATCC 19718 prolin-rich transmembrane protein NP_841644.1 1731343 R 228410 CDS NP_841645.1 30249575 1082558 complement(1731993..1732547) 1 NC_004757.1 transmembrane protein 1732547 1082558 NE1606 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841645.1 1731993 R 228410 CDS NP_841646.1 30249576 1082559 complement(1732529..1733080) 1 NC_004757.1 transmembrane protein 1733080 1082559 NE1607 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841646.1 1732529 R 228410 CDS NP_841647.1 30249577 1082560 complement(1733058..1733903) 1 NC_004757.1 hypothetical protein 1733903 1082560 NE1608 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841647.1 1733058 R 228410 CDS NP_841648.1 30249578 1082561 complement(1733884..1735575) 1 NC_004757.1 type II secretion system protein E 1735575 1082561 NE1609 Nitrosomonas europaea ATCC 19718 type II secretion system protein E NP_841648.1 1733884 R 228410 CDS NP_841649.1 30249579 1082562 complement(1735575..1736759) 1 NC_004757.1 type II secretion system protein 1736759 1082562 NE1610 Nitrosomonas europaea ATCC 19718 type II secretion system protein NP_841649.1 1735575 R 228410 CDS NP_841650.1 30249580 1082563 complement(1736778..1737278) 1 NC_004757.1 general secretion pathway protein G 1737278 1082563 NE1611 Nitrosomonas europaea ATCC 19718 general secretion pathway protein G NP_841650.1 1736778 R 228410 CDS NP_841651.1 30249581 1082564 1737613..1738440 1 NC_004757.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1738440 dapF 1082564 dapF Nitrosomonas europaea ATCC 19718 diaminopimelate epimerase NP_841651.1 1737613 D 228410 CDS NP_841652.1 30249582 1082565 1738567..1740297 1 NC_004757.1 ABC transporter ATP-binding protein/permease 1740297 1082565 NE1613 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein/permease NP_841652.1 1738567 D 228410 CDS NP_841653.1 30249583 1082566 complement(1740272..1741510) 1 NC_004757.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 1741510 cca 1082566 cca Nitrosomonas europaea ATCC 19718 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase NP_841653.1 1740272 R 228410 CDS NP_841654.1 30249584 1082567 complement(1741519..1743426) 1 NC_004757.1 SLT domain-containing protein 1743426 slt 1082567 slt Nitrosomonas europaea ATCC 19718 SLT domain-containing protein NP_841654.1 1741519 R 228410 CDS NP_841655.1 30249585 1082568 complement(1743624..1744967) 1 NC_004757.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1744967 gdhA 1082568 gdhA Nitrosomonas europaea ATCC 19718 glutamate dehydrogenase NP_841655.1 1743624 R 228410 CDS NP_841656.1 30249586 1082569 1745225..1745785 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 1745785 1082569 NE1617 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_841656.1 1745225 D 228410 CDS NP_841657.1 30249587 1082574 1749937..1750350 1 NC_004757.1 hypothetical protein 1750350 1082574 NE1622 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841657.1 1749937 D 228410 CDS NP_841658.1 30249588 1082575 complement(1750574..1754287) 1 NC_004757.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 1754287 metH 1082575 metH Nitrosomonas europaea ATCC 19718 B12-dependent methionine synthase NP_841658.1 1750574 R 228410 CDS NP_841659.1 30249589 1082576 complement(1754414..1755805) 1 NC_004757.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1755805 gltX 1082576 gltX Nitrosomonas europaea ATCC 19718 glutamyl-tRNA synthetase NP_841659.1 1754414 R 228410 CDS NP_841660.1 30249590 1082577 1756638..1758497 1 NC_004757.1 ribonuclease II domain-containing protein 1758497 1082577 NE1625 Nitrosomonas europaea ATCC 19718 ribonuclease II domain-containing protein NP_841660.1 1756638 D 228410 CDS NP_841661.1 30249591 1082578 1758504..1759418 1 NC_004757.1 TonB protein 1759418 1082578 NE1626 Nitrosomonas europaea ATCC 19718 TonB protein NP_841661.1 1758504 D 228410 CDS NP_841662.1 30249592 1082579 1759452..1760282 1 NC_004757.1 shikimate / quinate 5-dehydrogenase 1760282 aroE1 1082579 aroE1 Nitrosomonas europaea ATCC 19718 shikimate / quinate 5-dehydrogenase NP_841662.1 1759452 D 228410 CDS NP_841663.1 30249593 1082580 1760279..1761013 1 NC_004757.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 1761013 mtgA 1082580 mtgA Nitrosomonas europaea ATCC 19718 monofunctional biosynthetic peptidoglycan transglycosylase NP_841663.1 1760279 D 228410 CDS NP_841664.1 30249594 1082581 1761187..1762383 1 NC_004757.1 hypothetical protein 1762383 1082581 NE1629 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841664.1 1761187 D 228410 CDS NP_841665.1 30249595 1082582 1762568..1762975 1 NC_004757.1 transposase 1762975 1082582 NE1630 Nitrosomonas europaea ATCC 19718 transposase NP_841665.1 1762568 D 228410 CDS NP_841666.1 30249596 1082583 1762975..1763343 1 NC_004757.1 IS4 family transposase 1763343 1082583 NE1631 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_841666.1 1762975 D 228410 CDS NP_841667.1 30249597 1082585 1764111..1765541 1 NC_004757.1 divalent cation transporter 1765541 mgtE 1082585 mgtE Nitrosomonas europaea ATCC 19718 divalent cation transporter NP_841667.1 1764111 D 228410 CDS NP_841668.1 30249598 1082586 complement(1765533..1766645) 1 NC_004757.1 hypothetical protein 1766645 1082586 NE1634 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841668.1 1765533 R 228410 CDS NP_841669.1 30249599 1082587 complement(1766638..1767546) 1 NC_004757.1 hypothetical protein 1767546 1082587 NE1635 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841669.1 1766638 R 228410 CDS NP_841670.1 30249600 1082588 complement(1767543..1767863) 1 NC_004757.1 hypothetical protein 1767863 1082588 NE1636 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841670.1 1767543 R 228410 CDS NP_841671.1 30249601 1082589 complement(1767860..1768294) 1 NC_004757.1 hypothetical protein 1768294 1082589 NE1637 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841671.1 1767860 R 228410 CDS NP_841672.1 30249602 1082590 complement(1768644..1771862) 1 NC_004757.1 acriflavin resistance protein:heavy metal efflux pump CzcA 1771862 czcA 1082590 czcA Nitrosomonas europaea ATCC 19718 acriflavin resistance protein:heavy metal efflux pump CzcA NP_841672.1 1768644 R 228410 CDS NP_841673.1 30249603 1082591 complement(1771967..1773460) 1 NC_004757.1 hemolysin D 1773460 czcB 1082591 czcB Nitrosomonas europaea ATCC 19718 hemolysin D NP_841673.1 1771967 R 228410 CDS NP_841674.1 30249604 1082592 complement(1773457..1774863) 1 NC_004757.1 Outer membrane efflux protein 1774863 czcC 1082592 czcC Nitrosomonas europaea ATCC 19718 Outer membrane efflux protein NP_841674.1 1773457 R 228410 CDS NP_841675.1 30249605 1082593 complement(1774969..1775340) 1 NC_004757.1 hypothetical protein 1775340 1082593 NE1641 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841675.1 1774969 R 228410 CDS NP_841676.1 30249606 1082594 complement(1775496..1776092) 1 NC_004757.1 Maf-like protein 1776092 1082594 NE1642 Nitrosomonas europaea ATCC 19718 Maf-like protein NP_841676.1 1775496 R 228410 CDS NP_841677.1 30249607 1082595 1776161..1776667 1 NC_004757.1 hypothetical protein 1776667 1082595 NE1643 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841677.1 1776161 D 228410 CDS NP_841678.1 30249608 1082596 1776708..1776890 1 NC_004757.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1776890 rpmF 1082596 rpmF Nitrosomonas europaea ATCC 19718 50S ribosomal protein L32 NP_841678.1 1776708 D 228410 CDS NP_841679.2 161511227 1082597 1776941..1777987 1 NC_004757.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1777987 plsX 1082597 plsX Nitrosomonas europaea ATCC 19718 glycerol-3-phosphate acyltransferase PlsX NP_841679.2 1776941 D 228410 CDS NP_841680.1 30249610 1082598 1777996..1778952 1 NC_004757.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1778952 fabH 1082598 fabH Nitrosomonas europaea ATCC 19718 3-oxoacyl-ACP synthase NP_841680.1 1777996 D 228410 CDS NP_841681.1 30249611 1082599 1778956..1779894 1 NC_004757.1 malonyl CoA-ACP transacylase 1779894 fabD 1082599 fabD Nitrosomonas europaea ATCC 19718 malonyl CoA-ACP transacylase NP_841681.1 1778956 D 228410 CDS NP_841682.1 30249612 1082600 1779950..1780693 1 NC_004757.1 short-chain dehydrogenase/reductase 1780693 fabG1 1082600 fabG1 Nitrosomonas europaea ATCC 19718 short-chain dehydrogenase/reductase NP_841682.1 1779950 D 228410 CDS NP_841683.1 30249613 1082601 1780861..1781106 1 NC_004757.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1781106 acpP 1082601 acpP Nitrosomonas europaea ATCC 19718 acyl carrier protein NP_841683.1 1780861 D 228410 CDS NP_841684.1 30249614 1082602 1781140..1782381 1 NC_004757.1 Beta-ketoacyl synthase 1782381 fabF1 1082602 fabF1 Nitrosomonas europaea ATCC 19718 Beta-ketoacyl synthase NP_841684.1 1781140 D 228410 CDS NP_841685.1 30249615 1082603 1782509..1783540 1 NC_004757.1 hypothetical protein 1783540 1082603 NE1651 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841685.1 1782509 D 228410 CDS NP_841686.1 30249616 1082604 1783631..1786309 1 NC_004757.1 dolichol monophosphate mannose synthase 1786309 1082604 NE1652 Nitrosomonas europaea ATCC 19718 dolichol monophosphate mannose synthase NP_841686.1 1783631 D 228410 CDS NP_841687.1 30249617 1082605 complement(1786263..1787057) 1 NC_004757.1 ZIP Zinc transporter 1787057 1082605 NE1653 Nitrosomonas europaea ATCC 19718 ZIP Zinc transporter NP_841687.1 1786263 R 228410 CDS NP_841688.1 30249618 1082606 complement(1787250..1788014) 1 NC_004757.1 hypothetical protein 1788014 1082606 NE1654 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841688.1 1787250 R 228410 CDS NP_841689.1 30249619 1082607 complement(1788082..1789266) 1 NC_004757.1 class-I aminotransferase 1789266 1082607 NE1655 Nitrosomonas europaea ATCC 19718 class-I aminotransferase NP_841689.1 1788082 R 228410 CDS NP_841690.1 30249620 1082608 complement(1789263..1789544) 1 NC_004757.1 hypothetical protein 1789544 1082608 NE1656 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841690.1 1789263 R 228410 CDS NP_841691.1 30249621 1082609 complement(1789665..1790585) 1 NC_004757.1 hypothetical protein 1790585 1082609 NE1657 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841691.1 1789665 R 228410 CDS NP_841692.1 30249622 1082610 complement(1790664..1792496) 1 NC_004757.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 1792496 1082610 NE1658 Nitrosomonas europaea ATCC 19718 acyl-CoA synthetase NP_841692.1 1790664 R 228410 CDS NP_841693.1 30249623 1082611 1792885..1793865 1 NC_004757.1 hypothetical protein 1793865 1082611 NE1659 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841693.1 1792885 D 228410 CDS NP_841694.1 30249624 1082612 complement(1793869..1794390) 1 NC_004757.1 transcription elongation factor GreA/GreB 1794390 greA 1082612 greA Nitrosomonas europaea ATCC 19718 transcription elongation factor GreA/GreB NP_841694.1 1793869 R 228410 CDS NP_841695.1 30249625 1082613 complement(1794525..1797722) 1 NC_004757.1 xarbamoyl-phosphate synthase 1797722 carB 1082613 carB Nitrosomonas europaea ATCC 19718 xarbamoyl-phosphate synthase NP_841695.1 1794525 R 228410 CDS NP_841696.1 30249626 1082614 complement(1797747..1798898) 1 NC_004757.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1798898 carA 1082614 carA Nitrosomonas europaea ATCC 19718 carbamoyl phosphate synthase small subunit NP_841696.1 1797747 R 228410 CDS NP_841697.1 30249627 1082615 complement(1799198..1801303) 1 NC_004757.1 M3 family peptidase 1801303 prlC 1082615 prlC Nitrosomonas europaea ATCC 19718 M3 family peptidase NP_841697.1 1799198 R 228410 CDS NP_841698.1 30249628 1082616 complement(1801423..1802694) 1 NC_004757.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1802694 pyrX 1082616 pyrX Nitrosomonas europaea ATCC 19718 dihydroorotase NP_841698.1 1801423 R 228410 CDS NP_841699.1 30249629 1082617 complement(1802696..1803646) 1 NC_004757.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1803646 pyrB 1082617 pyrB Nitrosomonas europaea ATCC 19718 aspartate carbamoyltransferase catalytic subunit NP_841699.1 1802696 R 228410 CDS NP_841700.1 30249630 1082618 complement(1803782..1804285) 1 NC_004757.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1804285 pyrR 1082618 pyrR Nitrosomonas europaea ATCC 19718 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase NP_841700.1 1803782 R 228410 CDS NP_841701.1 30249631 1082619 complement(1804272..1804718) 1 NC_004757.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1804718 1082619 NE1667 Nitrosomonas europaea ATCC 19718 Holliday junction resolvase-like protein NP_841701.1 1804272 R 228410 CDS NP_841702.1 30249632 1082620 complement(1804711..1805319) 1 NC_004757.1 hypothetical protein 1805319 1082620 NE1668 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841702.1 1804711 R 228410 CDS NP_841703.1 30249633 1082621 complement(1805316..1805942) 1 NC_004757.1 hypothetical protein 1805942 1082621 NE1669 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841703.1 1805316 R 228410 CDS NP_841704.1 30249634 1082622 complement(1806003..1807277) 1 NC_004757.1 glycolate oxidase iron-sulfur subunit 1807277 1082622 NE1670 Nitrosomonas europaea ATCC 19718 glycolate oxidase iron-sulfur subunit NP_841704.1 1806003 R 228410 CDS NP_841705.1 30249635 1082623 1807491..1807760 1 NC_004757.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1807760 rpsP 1082623 rpsP Nitrosomonas europaea ATCC 19718 30S ribosomal protein S16 NP_841705.1 1807491 D 228410 CDS NP_841706.1 30249636 1082624 1807789..1808298 1 NC_004757.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1808298 rimM 1082624 rimM Nitrosomonas europaea ATCC 19718 16S rRNA-processing protein RimM NP_841706.1 1807789 D 228410 CDS NP_841707.1 30249637 1082625 1808309..1809121 1 NC_004757.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1809121 trmD 1082625 trmD Nitrosomonas europaea ATCC 19718 tRNA (guanine-N(1)-)-methyltransferase NP_841707.1 1808309 D 228410 CDS NP_841708.1 30249638 1082626 1809123..1809521 1 NC_004757.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1809521 rplS 1082626 rplS Nitrosomonas europaea ATCC 19718 50S ribosomal protein L19 NP_841708.1 1809123 D 228410 CDS NP_841709.1 30249639 1082627 1809713..1810756 1 NC_004757.1 integrase catalytic subunit 1810756 1082627 NE1675 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841709.1 1809713 D 228410 CDS NP_841710.1 30249640 1082630 complement(1811991..1812338) 1 NC_004757.1 arsenate reductase 1812338 yfgD 1082630 yfgD Nitrosomonas europaea ATCC 19718 arsenate reductase NP_841710.1 1811991 R 228410 CDS NP_841711.1 30249641 1082631 complement(1812348..1812866) 1 NC_004757.1 hypothetical protein 1812866 1082631 NE1679 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841711.1 1812348 R 228410 CDS NP_841712.1 30249642 1082632 complement(1812938..1813195) 1 NC_004757.1 hypothetical protein 1813195 1082632 NE1680 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841712.1 1812938 R 228410 CDS NP_841713.1 30249643 1082633 complement(1813254..1813916) 1 NC_004757.1 methyltransferase 1813916 1082633 NE1681 Nitrosomonas europaea ATCC 19718 methyltransferase NP_841713.1 1813254 R 228410 CDS NP_841714.1 30249644 1082634 complement(1813947..1815140) 1 NC_004757.1 transmembrane protein 1815140 1082634 NE1682 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841714.1 1813947 R 228410 CDS NP_841715.1 30249645 1082635 complement(1815289..1815600) 1 NC_004757.1 hypothetical protein 1815600 1082635 NE1683 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841715.1 1815289 R 228410 CDS NP_841716.1 30249646 1082636 complement(1815606..1816070) 1 NC_004757.1 hypothetical protein 1816070 1082636 NE1684 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841716.1 1815606 R 228410 CDS NP_841717.1 30249647 1082637 complement(1816098..1817501) 1 NC_004757.1 hypothetical protein 1817501 1082637 NE1685 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841717.1 1816098 R 228410 CDS NP_841718.1 30249648 1082638 1817578..1818336 1 NC_004757.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1818336 1082638 NE1686 Nitrosomonas europaea ATCC 19718 3-deoxy-manno-octulosonate cytidylyltransferase NP_841718.1 1817578 D 228410 CDS NP_841719.1 30249649 1082639 1818356..1819117 1 NC_004757.1 similar to (NC_003296) PROBABLE 2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOICACID ALDOLASE PROTEIN [Ralstonia solanacearum] evalue=3.00e-40, 37% identity; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1819117 hpaI2 1082639 hpaI2 Nitrosomonas europaea ATCC 19718 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase NP_841719.1 1818356 D 228410 CDS NP_841720.1 30249650 1082640 1819114..1820049 1 NC_004757.1 D-isomer specific 2-hydroxyacid dehydrogenase 1820049 serA 1082640 serA Nitrosomonas europaea ATCC 19718 D-isomer specific 2-hydroxyacid dehydrogenase NP_841720.1 1819114 D 228410 CDS NP_841721.1 30249651 1082641 1820042..1820986 1 NC_004757.1 epimerase 1820986 1082641 NE1689 Nitrosomonas europaea ATCC 19718 epimerase NP_841721.1 1820042 D 228410 CDS NP_841722.1 30249652 1082642 1820983..1821639 1 NC_004757.1 HAD family hydrolase 1821639 1082642 NE1690 Nitrosomonas europaea ATCC 19718 HAD family hydrolase NP_841722.1 1820983 D 228410 CDS NP_841723.1 30249653 1082643 1821621..1822307 1 NC_004757.1 glucosamine/galactosamine-6-phosphate isomerase 1822307 1082643 NE1691 Nitrosomonas europaea ATCC 19718 glucosamine/galactosamine-6-phosphate isomerase NP_841723.1 1821621 D 228410 CDS NP_841724.1 30249654 1082644 1822332..1822694 1 NC_004757.1 hypothetical protein 1822694 1082644 NE1692 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841724.1 1822332 D 228410 CDS NP_841725.1 30249655 1082645 complement(1822742..1823395) 1 NC_004757.1 transmembrane protein 1823395 1082645 NE1693 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841725.1 1822742 R 228410 CDS NP_841726.1 30249656 1082646 complement(1823456..1824463) 1 NC_004757.1 glucokinase 1824463 1082646 NE1694 Nitrosomonas europaea ATCC 19718 glucokinase NP_841726.1 1823456 R 228410 CDS NP_841727.1 30249657 1082647 1824728..1825654 1 NC_004757.1 hexapeptide repeat-containing transferase 1825654 1082647 NE1695 Nitrosomonas europaea ATCC 19718 hexapeptide repeat-containing transferase NP_841727.1 1824728 D 228410 CDS NP_841728.1 30249658 1082648 1825735..1826922 1 NC_004757.1 hypothetical protein 1826922 1082648 NE1696 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841728.1 1825735 D 228410 CDS NP_841729.1 30249659 1082649 complement(1826919..1828187) 1 NC_004757.1 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme 1828187 metY 1082649 metY Nitrosomonas europaea ATCC 19718 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme NP_841729.1 1826919 R 228410 CDS NP_841730.1 30249660 1082650 complement(1828413..1829384) 1 NC_004757.1 hypothetical protein 1829384 1082650 NE1698 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841730.1 1828413 R 228410 CDS NP_841731.1 30249661 1082651 1829479..1830753 1 NC_004757.1 hypothetical protein 1830753 1082651 NE1699 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841731.1 1829479 D 228410 CDS NP_841732.1 30249662 1082652 complement(1830928..1834314) 1 NC_004757.1 diguanylate cyclase/phosphodiesterase 1834314 1082652 NE1700 Nitrosomonas europaea ATCC 19718 diguanylate cyclase/phosphodiesterase NP_841732.1 1830928 R 228410 CDS NP_841733.1 30249663 1082653 1834591..1835928 1 NC_004757.1 msrA, pms; peptide methionine sulfoxide reductase 1835928 1082653 NE1701 Nitrosomonas europaea ATCC 19718 msrA, pms; peptide methionine sulfoxide reductase NP_841733.1 1834591 D 228410 CDS NP_841734.1 30249664 1082654 complement(1836014..1837441) 1 NC_004757.1 hypothetical protein 1837441 1082654 NE1702 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841734.1 1836014 R 228410 CDS NP_841735.1 30249665 1082655 complement(1838132..1838443) 1 NC_004757.1 hypothetical protein 1838443 1082655 NE1703 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841735.1 1838132 R 228410 CDS NP_841736.1 30249666 1082656 complement(1838454..1838837) 1 NC_004757.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1838837 ccrB 1082656 ccrB Nitrosomonas europaea ATCC 19718 camphor resistance protein CrcB NP_841736.1 1838454 R 228410 CDS NP_841737.1 30249667 1082657 1839274..1841895 1 NC_004757.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1841895 mutS 1082657 mutS Nitrosomonas europaea ATCC 19718 DNA mismatch repair protein MutS NP_841737.1 1839274 D 228410 CDS NP_841738.1 30249668 1082658 complement(1841899..1842378) 1 NC_004757.1 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) 1842378 slyD 1082658 slyD Nitrosomonas europaea ATCC 19718 FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) NP_841738.1 1841899 R 228410 CDS NP_841739.1 30249669 1082659 complement(1842393..1843046) 1 NC_004757.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1843046 rnhB 1082659 rnhB Nitrosomonas europaea ATCC 19718 ribonuclease HII NP_841739.1 1842393 R 228410 CDS NP_841740.1 30249670 1082660 complement(1843068..1843529) 1 NC_004757.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1843529 fabZ 1082660 fabZ Nitrosomonas europaea ATCC 19718 (3R)-hydroxymyristoyl-ACP dehydratase NP_841740.1 1843068 R 228410 CDS NP_841741.1 30249671 1082661 complement(1843546..1844109) 1 NC_004757.1 transmembrane protein 1844109 1082661 NE1709 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841741.1 1843546 R 228410 CDS NP_841742.1 30249672 1082662 complement(1844136..1846412) 1 NC_004757.1 surface antigen (D15) 1846412 1082662 NE1710 Nitrosomonas europaea ATCC 19718 surface antigen (D15) NP_841742.1 1844136 R 228410 CDS NP_841743.1 30249673 1082663 complement(1846415..1847782) 1 NC_004757.1 membrane-associated Zn-dependent protease 1 1847782 1082663 NE1711 Nitrosomonas europaea ATCC 19718 membrane-associated Zn-dependent protease 1 NP_841743.1 1846415 R 228410 CDS NP_841744.1 30249674 1082664 complement(1847809..1849050) 1 NC_004757.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1849050 dxr 1082664 dxr Nitrosomonas europaea ATCC 19718 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP_841744.1 1847809 R 228410 CDS NP_841745.1 30249675 1082665 complement(1849047..1849874) 1 NC_004757.1 cdsA; phosphatidate cytidylyltransferase 1849874 cdsA 1082665 cdsA Nitrosomonas europaea ATCC 19718 cdsA; phosphatidate cytidylyltransferase NP_841745.1 1849047 R 228410 CDS NP_841746.1 30249676 1082666 complement(1849913..1850704) 1 NC_004757.1 UDP pyrophosphate synthetase 1850704 1082666 NE1714 Nitrosomonas europaea ATCC 19718 UDP pyrophosphate synthetase NP_841746.1 1849913 R 228410 CDS NP_841747.1 30249677 1082667 complement(1850708..1851265) 1 NC_004757.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1851265 frr 1082667 frr Nitrosomonas europaea ATCC 19718 ribosome recycling factor NP_841747.1 1850708 R 228410 CDS NP_841748.1 30249678 1082668 complement(1851371..1852084) 1 NC_004757.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1852084 pyrH 1082668 pyrH Nitrosomonas europaea ATCC 19718 uridylate kinase NP_841748.1 1851371 R 228410 CDS NP_841749.1 30249679 1082669 complement(1852239..1853123) 1 NC_004757.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1853123 tsf 1082669 tsf Nitrosomonas europaea ATCC 19718 elongation factor Ts NP_841749.1 1852239 R 228410 CDS NP_841750.1 30249680 1082670 complement(1853198..1853953) 1 NC_004757.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1853953 rpsB 1082670 rpsB Nitrosomonas europaea ATCC 19718 30S ribosomal protein S2 NP_841750.1 1853198 R 228410 CDS NP_841751.1 30249681 1082671 complement(1854179..1854922) 1 NC_004757.1 anaerobic transcriptional regulatory protein 1854922 1082671 NE1719 Nitrosomonas europaea ATCC 19718 anaerobic transcriptional regulatory protein NP_841751.1 1854179 R 228410 CDS NP_841752.1 30249682 1082672 complement(1854990..1855469) 1 NC_004757.1 cytochrome c, class I 1855469 1082672 NE1720 Nitrosomonas europaea ATCC 19718 cytochrome c, class I NP_841752.1 1854990 R 228410 CDS NP_841753.1 30249683 1082673 complement(1855500..1857650) 1 NC_004757.1 hypothetical protein 1857650 1082673 NE1721 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841753.1 1855500 R 228410 CDS NP_841754.1 30249684 1082674 complement(1857895..1858320) 1 NC_004757.1 ferric uptake regulator family protein 1858320 1082674 NE1722 Nitrosomonas europaea ATCC 19718 ferric uptake regulator family protein NP_841754.1 1857895 R 228410 CDS NP_841755.1 30249685 1082675 complement(1858966..1860204) 1 NC_004757.1 hypothetical protein 1860204 1082675 NE1723 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841755.1 1858966 R 228410 CDS NP_841756.1 30249686 1082676 1860292..1861242 1 NC_004757.1 phosphotransferase domain-containing protein 1861242 1082676 NE1724 Nitrosomonas europaea ATCC 19718 phosphotransferase domain-containing protein NP_841756.1 1860292 D 228410 CDS NP_841757.1 30249687 1082677 1861300..1861932 1 NC_004757.1 Sua5/YciO/YrdC/YwlC family protein 1861932 1082677 NE1725 Nitrosomonas europaea ATCC 19718 Sua5/YciO/YrdC/YwlC family protein NP_841757.1 1861300 D 228410 CDS NP_841758.1 30249688 1082678 1861925..1862590 1 NC_004757.1 integral membrane transmembrane protein 1862590 1082678 NE1726 Nitrosomonas europaea ATCC 19718 integral membrane transmembrane protein NP_841758.1 1861925 D 228410 CDS NP_841759.1 30249689 1082679 1862663..1863865 1 NC_004757.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1863865 trpS 1082679 trpS Nitrosomonas europaea ATCC 19718 tryptophanyl-tRNA synthetase NP_841759.1 1862663 D 228410 CDS NP_841760.1 30249690 1082680 1863905..1864705 1 NC_004757.1 hypothetical protein 1864705 1082680 NE1728 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841760.1 1863905 D 228410 CDS NP_841761.1 30249691 1082681 1864671..1865333 1 NC_004757.1 hypothetical protein 1865333 1082681 NE1729 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841761.1 1864671 D 228410 CDS NP_841762.1 30249692 1082682 1865346..1866593 1 NC_004757.1 isocitrate dehydrogenase [NADP] oxidoreductase protein 1866593 icd 1082682 icd Nitrosomonas europaea ATCC 19718 isocitrate dehydrogenase [NADP] oxidoreductase protein NP_841762.1 1865346 D 228410 CDS NP_841763.1 30249693 1082683 complement(1866714..1866917) 1 NC_004757.1 cold-shock DNA-binding protein 1866917 cspD2 1082683 cspD2 Nitrosomonas europaea ATCC 19718 cold-shock DNA-binding protein NP_841763.1 1866714 R 228410 CDS NP_841764.1 30249694 1082684 1867290..1867601 1 NC_004757.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1867601 clpS 1082684 clpS Nitrosomonas europaea ATCC 19718 ATP-dependent Clp protease adaptor protein ClpS NP_841764.1 1867290 D 228410 CDS NP_841765.1 30249695 1082685 1867603..1869873 1 NC_004757.1 ClpA, ATP dependent protease, chaperonin 1869873 clpA 1082685 clpA Nitrosomonas europaea ATCC 19718 ClpA, ATP dependent protease, chaperonin NP_841765.1 1867603 D 228410 CDS NP_841766.1 30249696 1082686 1869892..1870575 1 NC_004757.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1870575 pyrE 1082686 pyrE Nitrosomonas europaea ATCC 19718 orotate phosphoribosyltransferase NP_841766.1 1869892 D 228410 CDS NP_841767.1 30249697 1082687 1870871..1871947 1 NC_004757.1 sulfonate binding protein 1871947 1082687 NE1735 Nitrosomonas europaea ATCC 19718 sulfonate binding protein NP_841767.1 1870871 D 228410 CDS NP_841768.1 30249698 1082688 1871952..1872788 1 NC_004757.1 transport system permease 1872788 1082688 NE1736 Nitrosomonas europaea ATCC 19718 transport system permease NP_841768.1 1871952 D 228410 CDS NP_841769.1 30249699 1082689 1872776..1873609 1 NC_004757.1 nitrate/nitrite transport system ATP-binding protein NrtD 1873609 nrtD 1082689 nrtD Nitrosomonas europaea ATCC 19718 nitrate/nitrite transport system ATP-binding protein NrtD NP_841769.1 1872776 D 228410 CDS NP_841770.1 30249700 1082690 1873895..1875391 1 NC_004757.1 sensory transduction histidine kinase 1875391 1082690 NE1738 Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_841770.1 1873895 D 228410 CDS NP_841771.1 30249701 1082692 complement(1875853..1876731) 1 NC_004757.1 IS4 family transposase 1876731 1082692 NE1740 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_841771.1 1875853 R 228410 CDS NP_841772.1 30249702 1082694 complement(1877222..1879036) 1 NC_004757.1 mutL; DNA mismatch repair protein 1879036 mutL 1082694 mutL Nitrosomonas europaea ATCC 19718 mutL; DNA mismatch repair protein NP_841772.1 1877222 R 228410 CDS NP_841773.1 30249703 1082695 1879254..1879913 1 NC_004757.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1879913 cbbI 1082695 cbbI Nitrosomonas europaea ATCC 19718 ribose-5-phosphate isomerase A NP_841773.1 1879254 D 228410 CDS NP_841774.1 30249704 1082696 1880058..1880765 1 NC_004757.1 hypothetical protein 1880765 phoU 1082696 phoU Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841774.1 1880058 D 228410 CDS NP_841775.1 30249705 1082697 1880790..1882325 1 NC_004757.1 Ppx/GppA phosphatase 1882325 ppx 1082697 ppx Nitrosomonas europaea ATCC 19718 Ppx/GppA phosphatase NP_841775.1 1880790 D 228410 CDS NP_841776.1 30249706 1082698 complement(1882401..1882820) 1 NC_004757.1 fimbrial protein pilin 1882820 1082698 NE1746 Nitrosomonas europaea ATCC 19718 fimbrial protein pilin NP_841776.1 1882401 R 228410 CDS NP_841777.1 30249707 1082699 complement(1882838..1886269) 1 NC_004757.1 type 4 fimbrial biogenesis protein PilY1 1886269 pilY1 1082699 pilY1 Nitrosomonas europaea ATCC 19718 type 4 fimbrial biogenesis protein PilY1 NP_841777.1 1882838 R 228410 CDS NP_841778.1 30249708 1082700 complement(1886283..1887317) 1 NC_004757.1 hypothetical protein 1887317 1082700 NE1748 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841778.1 1886283 R 228410 CDS NP_841779.1 30249709 1082701 complement(1887342..1888370) 1 NC_004757.1 hypothetical protein 1888370 1082701 NE1749 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841779.1 1887342 R 228410 CDS NP_841780.1 30249710 1082702 complement(1888385..1888852) 1 NC_004757.1 pre-pilin leader sequence 1888852 1082702 NE1750 Nitrosomonas europaea ATCC 19718 pre-pilin leader sequence NP_841780.1 1888385 R 228410 CDS NP_841781.1 30249711 1082703 complement(1888846..1889379) 1 NC_004757.1 type-4 fimbrial pilin related signal peptide protein 1889379 1082703 NE1751 Nitrosomonas europaea ATCC 19718 type-4 fimbrial pilin related signal peptide protein NP_841781.1 1888846 R 228410 CDS NP_841782.1 30249712 1082704 complement(1889679..1890329) 1 NC_004757.1 hypothetical protein 1890329 1082704 NE1752 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841782.1 1889679 R 228410 CDS NP_841783.1 30249713 1082705 1890487..1892532 1 NC_004757.1 NAD-dependent DNA ligase 1892532 lig 1082705 lig Nitrosomonas europaea ATCC 19718 NAD-dependent DNA ligase NP_841783.1 1890487 D 228410 CDS NP_841784.1 30249714 1082706 1892686..1893432 1 NC_004757.1 Catalyzes the phosphorolytic cleavage of 6-oxopurine nucleosides; 5'-methylthioadenosine phosphorylase 1893432 1082706 NE1754 Nitrosomonas europaea ATCC 19718 5'-methylthioadenosine phosphorylase NP_841784.1 1892686 D 228410 CDS NP_841785.1 30249715 1082707 1893425..1893955 1 NC_004757.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1893955 def 1082707 def Nitrosomonas europaea ATCC 19718 peptide deformylase NP_841785.1 1893425 D 228410 CDS NP_841786.1 30249716 1082708 complement(1893978..1894391) 1 NC_004757.1 hypothetical protein 1894391 1082708 NE1756 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841786.1 1893978 R 228410 CDS NP_841787.1 30249717 1082709 1894644..1898096 1 NC_004757.1 hypothetical protein 1898096 1082709 NE1757 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841787.1 1894644 D 228410 CDS NP_841788.1 30249718 1082711 1898374..1899024 1 NC_004757.1 DedA family protein 1899024 dedA 1082711 dedA Nitrosomonas europaea ATCC 19718 DedA family protein NP_841788.1 1898374 D 228410 CDS NP_841789.1 30249719 1082712 complement(1899061..1901706) 1 NC_004757.1 hypothetical protein 1901706 1082712 NE1759 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841789.1 1899061 R 228410 CDS NP_841790.1 30249720 1082713 1902116..1903159 1 NC_004757.1 integrase catalytic subunit 1903159 1082713 NE1760 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841790.1 1902116 D 228410 CDS NP_841791.1 30249721 1082714 complement(1903260..1904309) 1 NC_004757.1 hypothetical protein 1904309 1082714 NE1761 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841791.1 1903260 R 228410 CDS NP_841792.1 30249722 1082715 complement(1904523..1906445) 1 NC_004757.1 molecular chaperone; heat shock protein 90 1906445 hptG 1082715 hptG Nitrosomonas europaea ATCC 19718 heat shock protein 90 NP_841792.1 1904523 R 228410 CDS NP_841793.1 30249723 1082716 1906555..1907655 1 NC_004757.1 membrane-bound dehydrogenase oxidoreductase protein 1907655 1082716 NE1763 Nitrosomonas europaea ATCC 19718 membrane-bound dehydrogenase oxidoreductase protein NP_841793.1 1906555 D 228410 CDS NP_841794.1 30249724 1082717 complement(1907694..1909139) 1 NC_004757.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1909139 nuoN 1082717 nuoN Nitrosomonas europaea ATCC 19718 NADH dehydrogenase subunit N NP_841794.1 1907694 R 228410 CDS NP_841795.1 30249725 1082718 complement(1909206..1910687) 1 NC_004757.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1910687 nuoM 1082718 nuoM Nitrosomonas europaea ATCC 19718 NADH dehydrogenase subunit M NP_841795.1 1909206 R 228410 CDS NP_841796.1 30249726 1082719 complement(1910773..1912719) 1 NC_004757.1 nuoL; transmembrane NADH dehydrogenase I (chain L) oxidoreductase protein 1912719 nuoL 1082719 nuoL Nitrosomonas europaea ATCC 19718 nuoL; transmembrane NADH dehydrogenase I (chain L) oxidoreductase protein NP_841796.1 1910773 R 228410 CDS NP_841797.1 30249727 1082720 complement(1912784..1913089) 1 NC_004757.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1913089 nuoK 1082720 nuoK Nitrosomonas europaea ATCC 19718 NADH dehydrogenase subunit K NP_841797.1 1912784 R 228410 CDS NP_841798.1 30249728 1082721 complement(1913145..1913750) 1 NC_004757.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1913750 nuoJ 1082721 nuoJ Nitrosomonas europaea ATCC 19718 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NP_841798.1 1913145 R 228410 CDS NP_841799.1 30249729 1082722 complement(1913768..1914256) 1 NC_004757.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1914256 nuoI 1082722 nuoI Nitrosomonas europaea ATCC 19718 NADH dehydrogenase subunit I NP_841799.1 1913768 R 228410 CDS NP_841800.1 30249730 1082723 complement(1914270..1915370) 1 NC_004757.1 respiratory-chain NADH dehydrogenase subunit 1 1915370 nuoH 1082723 nuoH Nitrosomonas europaea ATCC 19718 respiratory-chain NADH dehydrogenase subunit 1 NP_841800.1 1914270 R 228410 CDS NP_841801.1 30249731 1082724 complement(1915393..1917798) 1 NC_004757.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1917798 nuoG 1082724 nuoG Nitrosomonas europaea ATCC 19718 NADH dehydrogenase subunit G NP_841801.1 1915393 R 228410 CDS NP_841802.1 30249732 1082725 complement(1917861..1919138) 1 NC_004757.1 respiratory-chain NADH dehydrogenase 51 Kd subunit 1919138 nuoF 1082725 nuoF Nitrosomonas europaea ATCC 19718 respiratory-chain NADH dehydrogenase 51 Kd subunit NP_841802.1 1917861 R 228410 CDS NP_841803.1 30249733 1082726 complement(1919135..1919623) 1 NC_004757.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1919623 nuoE 1082726 nuoE Nitrosomonas europaea ATCC 19718 NADH dehydrogenase subunit E NP_841803.1 1919135 R 228410 CDS NP_841804.1 30249734 1082727 complement(1919620..1920873) 1 NC_004757.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1920873 nuoD 1082727 nuoD Nitrosomonas europaea ATCC 19718 NADH dehydrogenase subunit D NP_841804.1 1919620 R 228410 CDS NP_841805.1 30249735 1082728 complement(1920934..1921554) 1 NC_004757.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1921554 nuoC 1082728 nuoC Nitrosomonas europaea ATCC 19718 NADH dehydrogenase subunit C NP_841805.1 1920934 R 228410 CDS NP_841806.1 30249736 1082729 complement(1921567..1922043) 1 NC_004757.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1922043 nuoB 1082729 nuoB Nitrosomonas europaea ATCC 19718 NADH dehydrogenase subunit B NP_841806.1 1921567 R 228410 CDS NP_841807.1 30249737 1082730 complement(1922047..1922415) 1 NC_004757.1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 1922415 nuoA 1082730 nuoA Nitrosomonas europaea ATCC 19718 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NP_841807.1 1922047 R 228410 CDS NP_841808.1 30249738 1082732 complement(1922605..1922979) 1 NC_004757.1 preprotein translocase subunit SecG 1922979 secG 1082732 secG Nitrosomonas europaea ATCC 19718 preprotein translocase subunit SecG NP_841808.1 1922605 R 228410 CDS NP_841809.1 30249739 1082733 complement(1922996..1923754) 1 NC_004757.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1923754 tpiA 1082733 tpiA Nitrosomonas europaea ATCC 19718 triosephosphate isomerase NP_841809.1 1922996 R 228410 CDS NP_841810.1 30249740 1082734 1923957..1924706 1 NC_004757.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 1924706 gpmA 1082734 gpmA Nitrosomonas europaea ATCC 19718 phosphoglyceromutase NP_841810.1 1923957 D 228410 CDS NP_841811.1 30249741 1082735 1924706..1925977 1 NC_004757.1 M23/M37 familypeptidase 1925977 1082735 NE1781 Nitrosomonas europaea ATCC 19718 M23/M37 familypeptidase NP_841811.1 1924706 D 228410 CDS NP_841812.1 30249742 1082736 1926074..1927504 1 NC_004757.1 carboxy-terminal processing protease 1927504 1082736 NE1782 Nitrosomonas europaea ATCC 19718 carboxy-terminal processing protease NP_841812.1 1926074 D 228410 CDS NP_841813.1 30249743 1082737 1927535..1928311 1 NC_004757.1 NAD binding site:UBA/THIF-type NAD/FAD binding fold 1928311 thiF 1082737 thiF Nitrosomonas europaea ATCC 19718 NAD binding site:UBA/THIF-type NAD/FAD binding fold NP_841813.1 1927535 D 228410 CDS NP_841814.1 30249744 1082738 complement(1928318..1930066) 1 NC_004757.1 ABC transporter ATP-binding protein/permease 1930066 1082738 NE1784 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein/permease NP_841814.1 1928318 R 228410 CDS NP_841815.1 30249745 1082739 1930189..1930689 1 NC_004757.1 phosphotyrosine protein phosphatase 1930689 pt 1082739 pt Nitrosomonas europaea ATCC 19718 phosphotyrosine protein phosphatase NP_841815.1 1930189 D 228410 CDS NP_841816.1 30249746 1082742 1931964..1932332 1 NC_004757.1 transposase 1932332 1082742 NE1788 Nitrosomonas europaea ATCC 19718 transposase NP_841816.1 1931964 D 228410 CDS NP_841817.1 30249747 1082743 1932137..1932712 1 NC_004757.1 IS4 family transposase 1932712 1082743 NE1789 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_841817.1 1932137 D 228410 CDS NP_841818.1 30249748 1082744 1932867..1933988 1 NC_004757.1 hypothetical protein 1933988 1082744 NE1790 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841818.1 1932867 D 228410 CDS NP_841819.1 30249749 1082745 complement(1933996..1934943) 1 NC_004757.1 hypothetical protein 1934943 1082745 NE1791 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841819.1 1933996 R 228410 CDS NP_841820.1 30249750 1082746 complement(1935100..1936173) 1 NC_004757.1 hypothetical protein 1936173 1082746 NE1792 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841820.1 1935100 R 228410 CDS NP_841821.1 30249751 1082747 complement(1936240..1937178) 1 NC_004757.1 hypothetical protein 1937178 1082747 NE1793 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841821.1 1936240 R 228410 CDS NP_841822.1 30249752 1082748 complement(1937178..1938170) 1 NC_004757.1 hypothetical protein 1938170 1082748 NE1794 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841822.1 1937178 R 228410 CDS NP_841823.1 30249753 1082749 complement(1938219..1940153) 1 NC_004757.1 glutamine amidotransferase class-II:asparagine synthase 1940153 1082749 NE1795 Nitrosomonas europaea ATCC 19718 glutamine amidotransferase class-II:asparagine synthase NP_841823.1 1938219 R 228410 CDS NP_841824.1 30249754 1082750 complement(1940166..1941329) 1 NC_004757.1 group 1 glycosyl transferase 1941329 1082750 NE1796 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_841824.1 1940166 R 228410 CDS NP_841825.1 30249755 1082751 complement(1941346..1942926) 1 NC_004757.1 hypothetical protein 1942926 1082751 NE1797 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841825.1 1941346 R 228410 CDS NP_841826.1 30249756 1082752 complement(1943007..1944203) 1 NC_004757.1 group 1 glycosyl transferase 1944203 1082752 NE1798 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_841826.1 1943007 R 228410 CDS NP_841827.1 30249757 1082753 complement(1944210..1945178) 1 NC_004757.1 hypothetical protein 1945178 1082753 NE1799 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841827.1 1944210 R 228410 CDS NP_841828.1 30249758 1082754 complement(1945286..1946134) 1 NC_004757.1 polysaccharide deacetylase 1946134 1082754 NE1800 Nitrosomonas europaea ATCC 19718 polysaccharide deacetylase NP_841828.1 1945286 R 228410 CDS NP_841829.1 30249759 1082755 complement(1946131..1946964) 1 NC_004757.1 ATP/GTP-binding motif-containing protein 1946964 1082755 NE1801 Nitrosomonas europaea ATCC 19718 ATP/GTP-binding motif-containing protein NP_841829.1 1946131 R 228410 CDS NP_841830.1 30249760 1082756 complement(1946979..1948553) 1 NC_004757.1 hypothetical protein 1948553 1082756 NE1802 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841830.1 1946979 R 228410 CDS NP_841831.1 30249761 1082757 complement(1948553..1949488) 1 NC_004757.1 capsular polysaccharide biosynthesis protein 1949488 yveL 1082757 yveL Nitrosomonas europaea ATCC 19718 capsular polysaccharide biosynthesis protein NP_841831.1 1948553 R 228410 CDS NP_841832.1 30249762 1082758 complement(1949529..1951079) 1 NC_004757.1 chain length determinant protein 1951079 1082758 NE1804 Nitrosomonas europaea ATCC 19718 chain length determinant protein NP_841832.1 1949529 R 228410 CDS NP_841833.1 30249763 1082759 complement(1951122..1951739) 1 NC_004757.1 polysaccharide export protein, outer membrane 1951739 wza 1082759 wza Nitrosomonas europaea ATCC 19718 polysaccharide export protein, outer membrane NP_841833.1 1951122 R 228410 CDS NP_841834.1 30249764 1082760 1952567..1954234 1 NC_004757.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 1954234 1082760 NE1806 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein NP_841834.1 1952567 D 228410 CDS NP_841835.1 30249765 1082761 1954496..1955869 1 NC_004757.1 ATP-dependent RNA helicase protein 1955869 1082761 NE1807 Nitrosomonas europaea ATCC 19718 ATP-dependent RNA helicase protein NP_841835.1 1954496 D 228410 CDS NP_841836.1 30249766 1082762 complement(1956023..1957372) 1 NC_004757.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1957372 radA 1082762 radA Nitrosomonas europaea ATCC 19718 DNA repair protein RadA NP_841836.1 1956023 R 228410 CDS NP_841837.1 30249767 1082764 1958086..1959036 1 NC_004757.1 beta subunit of citrate lyase 1959036 1082764 NE1809 Nitrosomonas europaea ATCC 19718 beta subunit of citrate lyase NP_841837.1 1958086 D 228410 CDS NP_841838.1 30249768 1082765 1959228..1960400 1 NC_004757.1 catalyzes the formation of malyl-CoA from malate and CoA; malate--CoA ligase subunit beta 1960400 sucC 1082765 sucC Nitrosomonas europaea ATCC 19718 malate--CoA ligase subunit beta NP_841838.1 1959228 D 228410 CDS NP_841839.1 30249769 1082766 1960431..1961318 1 NC_004757.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1961318 1082766 NE1811 Nitrosomonas europaea ATCC 19718 succinyl-CoA synthetase subunit alpha NP_841839.1 1960431 D 228410 CDS NP_841840.1 30249770 1082769 complement(1963996..1964574) 1 NC_004757.1 hypothetical protein 1964574 1082769 NE1814 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841840.1 1963996 R 228410 CDS NP_841841.1 30249771 1082770 1965060..1965383 1 NC_004757.1 transposase IS911 1965383 1082770 NE1815 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_841841.1 1965060 D 228410 CDS NP_841842.1 30249772 1082771 1965437..1966288 1 NC_004757.1 integrase catalytic subunit 1966288 1082771 NE1816 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841842.1 1965437 D 228410 CDS NP_841843.1 30249773 1082772 1966830..1967459 1 NC_004757.1 hypothetical protein 1967459 1082772 NE1817 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841843.1 1966830 D 228410 CDS NP_841844.1 30249774 1082773 1967419..1967694 1 NC_004757.1 hypothetical protein 1967694 1082773 NE1818 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841844.1 1967419 D 228410 CDS NP_841845.1 30249775 1082776 1968379..1969221 1 NC_004757.1 hypothetical protein 1969221 1082776 NE1821 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841845.1 1968379 D 228410 CDS NP_841846.1 30249776 1082777 1969221..1970063 1 NC_004757.1 hypothetical protein 1970063 1082777 NE1822 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841846.1 1969221 D 228410 CDS NP_841847.1 30249777 1082778 complement(1970502..1971593) 1 NC_004757.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1971593 1082778 NE1823 Nitrosomonas europaea ATCC 19718 GTP-dependent nucleic acid-binding protein EngD NP_841847.1 1970502 R 228410 CDS NP_841848.1 30249778 1082779 complement(1971668..1972255) 1 NC_004757.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1972255 pth 1082779 pth Nitrosomonas europaea ATCC 19718 peptidyl-tRNA hydrolase NP_841848.1 1971668 R 228410 CDS NP_841849.1 30249779 1082780 complement(1972375..1972971) 1 NC_004757.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 1972971 rplY 1082780 rplY Nitrosomonas europaea ATCC 19718 50S ribosomal protein L25/general stress protein Ctc NP_841849.1 1972375 R 228410 CDS NP_841850.1 30249780 1082781 complement(1973028..1973978) 1 NC_004757.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1973978 1082781 NE1826 Nitrosomonas europaea ATCC 19718 ribose-phosphate pyrophosphokinase NP_841850.1 1973028 R 228410 CDS NP_841851.1 30249781 1082783 complement(1974155..1974991) 1 NC_004757.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1974991 ipk 1082783 ipk Nitrosomonas europaea ATCC 19718 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase NP_841851.1 1974155 R 228410 CDS NP_841852.1 30249782 1082784 complement(1975012..1975650) 1 NC_004757.1 lipoprotein localization protein LolB 1975650 1082784 NE1828 Nitrosomonas europaea ATCC 19718 lipoprotein localization protein LolB NP_841852.1 1975012 R 228410 CDS NP_841853.1 30249783 1082785 complement(1975763..1976059) 1 NC_004757.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 1976059 minE 1082785 minE Nitrosomonas europaea ATCC 19718 cell division topological specificity factor MinE NP_841853.1 1975763 R 228410 CDS NP_841854.1 30249784 1082786 complement(1976059..1976868) 1 NC_004757.1 ParA family ATPase 1976868 minD 1082786 minD Nitrosomonas europaea ATCC 19718 ParA family ATPase NP_841854.1 1976059 R 228410 CDS NP_841855.1 30249785 1082787 complement(1976894..1977619) 1 NC_004757.1 cell division inhibitor MinC 1977619 minC 1082787 minC Nitrosomonas europaea ATCC 19718 cell division inhibitor MinC NP_841855.1 1976894 R 228410 CDS NP_841856.1 30249786 1082788 1977870..1978418 1 NC_004757.1 hypothetical protein 1978418 1082788 NE1832 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841856.1 1977870 D 228410 CDS NP_841857.1 30249787 1082789 1978534..1979808 1 NC_004757.1 hypothetical protein 1979808 1082789 NE1833 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841857.1 1978534 D 228410 CDS NP_841858.1 30249788 1082790 1980082..1981527 1 NC_004757.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 1981527 trkA 1082790 trkA Nitrosomonas europaea ATCC 19718 potassium transporter peripheral membrane protein NP_841858.1 1980082 D 228410 CDS NP_841859.1 30249789 1082791 1981537..1983006 1 NC_004757.1 cation transport protein 1983006 1082791 NE1835 Nitrosomonas europaea ATCC 19718 cation transport protein NP_841859.1 1981537 D 228410 CDS NP_841860.1 30249790 1082792 1983125..1983532 1 NC_004757.1 response regulator receiver domain-containing protein 1983532 pilG 1082792 pilG Nitrosomonas europaea ATCC 19718 response regulator receiver domain-containing protein NP_841860.1 1983125 D 228410 CDS NP_841861.1 30249791 1082793 1983629..1984165 1 NC_004757.1 chorismate--pyruvate lyase 1984165 1082793 NE1837 Nitrosomonas europaea ATCC 19718 chorismate--pyruvate lyase NP_841861.1 1983629 D 228410 CDS NP_841862.1 30249792 1082794 1984239..1985132 1 NC_004757.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 1985132 ubiA 1082794 ubiA Nitrosomonas europaea ATCC 19718 4-hydroxybenzoate octaprenyltransferase NP_841862.1 1984239 D 228410 CDS NP_841863.1 30249793 1082795 1985203..1986666 1 NC_004757.1 hypothetical protein 1986666 1082795 NE1839 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841863.1 1985203 D 228410 CDS NP_841864.1 30249794 1082796 1986878..1987921 1 NC_004757.1 integrase catalytic subunit 1987921 1082796 NE1840 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841864.1 1986878 D 228410 CDS NP_841865.1 30249795 1082797 complement(1987984..1988508) 1 NC_004757.1 hypothetical protein 1988508 1082797 NE1841 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841865.1 1987984 R 228410 CDS NP_841866.1 30249796 1082800 1990579..1991589 1 NC_004757.1 integrase catalytic subunit 1991589 1082800 NE1843 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841866.1 1990579 D 228410 CDS NP_841867.1 30249797 1082802 1992108..1993151 1 NC_004757.1 integrase catalytic subunit 1993151 1082802 NE1845 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841867.1 1992108 D 228410 CDS NP_841868.1 30249798 1082803 1993750..1994601 1 NC_004757.1 HD domain-containing protein 1994601 1082803 NE1846 Nitrosomonas europaea ATCC 19718 HD domain-containing protein NP_841868.1 1993750 D 228410 CDS NP_841869.1 30249799 1082804 1994564..1996282 1 NC_004757.1 guanylate cyclase 1996282 1082804 NE1847 Nitrosomonas europaea ATCC 19718 guanylate cyclase NP_841869.1 1994564 D 228410 CDS NP_841870.1 30249800 1082805 complement(1996345..1996893) 1 NC_004757.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 1996893 greB 1082805 greB Nitrosomonas europaea ATCC 19718 transcription elongation factor GreB NP_841870.1 1996345 R 228410 CDS NP_841871.1 30249801 1082806 1996977..1997843 1 NC_004757.1 hypothetical protein 1997843 1082806 NE1849 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841871.1 1996977 D 228410 CDS NP_841872.1 30249802 1082807 complement(1997828..1999885) 1 NC_004757.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1999885 recG 1082807 recG Nitrosomonas europaea ATCC 19718 ATP-dependent DNA helicase RecG NP_841872.1 1997828 R 228410 CDS NP_841873.1 30249803 1082808 complement(1999916..2000305) 1 NC_004757.1 hypothetical protein 2000305 1082808 NE1851 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841873.1 1999916 R 228410 CDS NP_841874.1 30249804 1082809 2000393..2001646 1 NC_004757.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2001646 murA 1082809 murA Nitrosomonas europaea ATCC 19718 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NP_841874.1 2000393 D 228410 CDS NP_841875.1 30249805 1082810 complement(2001694..2002356) 1 NC_004757.1 hypothetical protein 2002356 1082810 NE1853 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841875.1 2001694 R 228410 CDS NP_841876.1 30249806 1082811 2002541..2003926 1 NC_004757.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2003926 argH 1082811 argH Nitrosomonas europaea ATCC 19718 argininosuccinate lyase NP_841876.1 2002541 D 228410 CDS NP_841877.1 30249807 1082812 2003946..2004851 1 NC_004757.1 hypothetical protein 2004851 1082812 NE1855 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841877.1 2003946 D 228410 CDS NP_841878.1 30249808 1082813 2005137..2006612 1 NC_004757.1 hypothetical protein 2006612 1082813 NE1856 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841878.1 2005137 D 228410 CDS NP_841879.1 30249809 1082814 2006677..2007858 1 NC_004757.1 SAM-binding motif-containing protein 2007858 ygcA 1082814 ygcA Nitrosomonas europaea ATCC 19718 SAM-binding motif-containing protein NP_841879.1 2006677 D 228410 CDS NP_841880.1 30249810 1082815 2007987..2008811 1 NC_004757.1 hypothetical protein 2008811 1082815 NE1858 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841880.1 2007987 D 228410 CDS NP_841881.1 30249811 1082816 complement(2009107..2010183) 1 NC_004757.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 2010183 cheB 1082816 cheB Nitrosomonas europaea ATCC 19718 chemotaxis-specific methylesterase NP_841881.1 2009107 R 228410 CDS NP_841882.1 30249812 1082817 complement(2010194..2010799) 1 NC_004757.1 catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 2010799 1082817 NE1860 Nitrosomonas europaea ATCC 19718 chemoreceptor glutamine deamidase CheD NP_841882.1 2010194 R 228410 CDS NP_841883.1 30249813 1082818 complement(2010875..2011723) 1 NC_004757.1 chemotaxis protein CheR 2011723 cheR 1082818 cheR Nitrosomonas europaea ATCC 19718 chemotaxis protein CheR NP_841883.1 2010875 R 228410 CDS NP_841884.1 30249814 1082819 complement(2011720..2012088) 1 NC_004757.1 hypothetical protein 2012088 1082819 NE1862 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841884.1 2011720 R 228410 CDS NP_841885.1 30249815 1082820 complement(2012073..2014403) 1 NC_004757.1 chemotaxis transducer 2014403 1082820 NE1863 Nitrosomonas europaea ATCC 19718 chemotaxis transducer NP_841885.1 2012073 R 228410 CDS NP_841886.1 30249816 1082821 complement(2014626..2016884) 1 NC_004757.1 chemotaxis sensory transducer protein 2016884 1082821 NE1864 Nitrosomonas europaea ATCC 19718 chemotaxis sensory transducer protein NP_841886.1 2014626 R 228410 CDS NP_841887.1 30249817 1082822 complement(2016958..2017467) 1 NC_004757.1 chemotaxis protein CheW 2017467 cheW 1082822 cheW Nitrosomonas europaea ATCC 19718 chemotaxis protein CheW NP_841887.1 2016958 R 228410 CDS NP_841888.1 30249818 1082823 complement(2017542..2019755) 1 NC_004757.1 similar to (NC_003296) PROBABLE CHEMOTAXIS SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] evalue=0.00e+00, 51% identity; chemotaxis sensor histidine kinase transcription regulator protein 2019755 cheA 1082823 cheA Nitrosomonas europaea ATCC 19718 chemotaxis sensor histidine kinase transcription regulator protein NP_841888.1 2017542 R 228410 CDS NP_841889.1 30249819 1082824 2020068..2020502 1 NC_004757.1 hypothetical protein 2020502 1082824 NE1867 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841889.1 2020068 D 228410 CDS NP_841890.1 30249820 1082825 2020591..2021223 1 NC_004757.1 hypothetical protein 2021223 1082825 NE1868 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841890.1 2020591 D 228410 CDS NP_841891.1 30249821 1082826 2021313..2022827 1 NC_004757.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 2022827 ubiB 1082826 ubiB Nitrosomonas europaea ATCC 19718 ubiquinone biosynthesis protein UbiB NP_841891.1 2021313 D 228410 CDS NP_841892.1 30249822 1082827 2022943..2024028 1 NC_004757.1 potA; spermidine/putrescine transport system ATP-binding protein 2024028 potA 1082827 potA Nitrosomonas europaea ATCC 19718 potA; spermidine/putrescine transport system ATP-binding protein NP_841892.1 2022943 D 228410 CDS NP_841893.1 30249823 1082828 2024031..2024939 1 NC_004757.1 potB; spermidine/putrescine transport system permease 2024939 potB 1082828 potB Nitrosomonas europaea ATCC 19718 potB; spermidine/putrescine transport system permease NP_841893.1 2024031 D 228410 CDS NP_841894.1 30249824 1082829 2024949..2025725 1 NC_004757.1 potC; spermidine/putrescine transport system permease 2025725 potC 1082829 potC Nitrosomonas europaea ATCC 19718 potC; spermidine/putrescine transport system permease NP_841894.1 2024949 D 228410 CDS NP_841895.1 30249825 1082830 2025728..2026837 1 NC_004757.1 solute-binding family 1 protein 2026837 potD 1082830 potD Nitrosomonas europaea ATCC 19718 solute-binding family 1 protein NP_841895.1 2025728 D 228410 CDS NP_841896.1 30249826 1082831 2026843..2027151 1 NC_004757.1 ferredoxin 2fe-2s protein 2027151 1082831 NE1874 Nitrosomonas europaea ATCC 19718 ferredoxin 2fe-2s protein NP_841896.1 2026843 D 228410 CDS NP_841897.1 30249827 1082832 2027464..2028117 1 NC_004757.1 esterase/lipase/thioesterase family protein 2028117 1082832 NE1875 Nitrosomonas europaea ATCC 19718 esterase/lipase/thioesterase family protein NP_841897.1 2027464 D 228410 CDS NP_841898.1 30249828 1082833 complement(2028086..2028991) 1 NC_004757.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2028991 hemF 1082833 hemF Nitrosomonas europaea ATCC 19718 coproporphyrinogen III oxidase NP_841898.1 2028086 R 228410 CDS NP_841899.1 30249829 1082834 2029161..2030333 1 NC_004757.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2030333 aroC 1082834 aroC Nitrosomonas europaea ATCC 19718 chorismate synthase NP_841899.1 2029161 D 228410 CDS NP_841900.1 30249830 1082835 complement(2030393..2030989) 1 NC_004757.1 hypothetical protein 2030989 1082835 NE1878 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841900.1 2030393 R 228410 CDS NP_841901.1 30249831 1082836 2031097..2031915 1 NC_004757.1 hypothetical protein 2031915 1082836 NE1879 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841901.1 2031097 D 228410 CDS NP_841902.1 30249832 1082837 complement(2032033..2033076) 1 NC_004757.1 integrase catalytic subunit 2033076 1082837 NE1880 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841902.1 2032033 R 228410 CDS NP_841903.1 30249833 1082838 complement(2033321..2033968) 1 NC_004757.1 hypothetical protein 2033968 1082838 NE1881 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841903.1 2033321 R 228410 CDS NP_841904.1 30249834 1082839 2034157..2035446 1 NC_004757.1 hypothetical protein 2035446 1082839 NE1882 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841904.1 2034157 D 228410 CDS NP_841905.1 30249835 1082840 2035443..2035985 1 NC_004757.1 hypothetical protein 2035985 1082840 NE1883 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841905.1 2035443 D 228410 CDS NP_841906.1 30249836 1082841 2035978..2036676 1 NC_004757.1 DNA ligase III 2036676 1082841 NE1884 Nitrosomonas europaea ATCC 19718 DNA ligase III NP_841906.1 2035978 D 228410 CDS NP_841907.1 30249837 1082842 2036733..2037107 1 NC_004757.1 hypothetical protein 2037107 1082842 NE1885 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841907.1 2036733 D 228410 CDS NP_841908.1 30249838 1082843 complement(2037432..2038889) 1 NC_004757.1 catalase 2038889 katA 1082843 katA Nitrosomonas europaea ATCC 19718 catalase NP_841908.1 2037432 R 228410 CDS NP_841909.1 30249839 1082844 complement(2038953..2040287) 1 NC_004757.1 hypothetical protein 2040287 1082844 NE1887 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841909.1 2038953 R 228410 CDS NP_841910.1 30249840 1082845 complement(2040325..2041125) 1 NC_004757.1 hypothetical protein 2041125 1082845 NE1888 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841910.1 2040325 R 228410 CDS NP_841911.1 30249841 1082846 complement(2041205..2041666) 1 NC_004757.1 hypothetical protein 2041666 1082846 NE1889 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841911.1 2041205 R 228410 CDS NP_841912.1 30249842 1082847 complement(2041956..2042270) 1 NC_004757.1 hypothetical protein 2042270 1082847 NE1890 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841912.1 2041956 R 228410 CDS NP_841913.1 30249843 1082848 complement(2042272..2042466) 1 NC_004757.1 hypothetical protein 2042466 1082848 NE1891 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841913.1 2042272 R 228410 CDS NP_841914.1 30249844 1082849 complement(2042579..2044162) 1 NC_004757.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2044162 nadB1 1082849 nadB1 Nitrosomonas europaea ATCC 19718 L-aspartate oxidase NP_841914.1 2042579 R 228410 CDS NP_841915.1 30249845 1082850 2044381..2045304 1 NC_004757.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2045304 ilvE 1082850 ilvE Nitrosomonas europaea ATCC 19718 branched-chain amino acid aminotransferase NP_841915.1 2044381 D 228410 CDS NP_841916.1 30249846 1082851 2045331..2045555 1 NC_004757.1 hypothetical protein 2045555 1082851 NE1894 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841916.1 2045331 D 228410 CDS NP_841917.1 30249847 1082852 2045620..2046996 1 NC_004757.1 phosphoglucomutase and phosphomannomutase family protein 2046996 1082852 NE1895 Nitrosomonas europaea ATCC 19718 phosphoglucomutase and phosphomannomutase family protein NP_841917.1 2045620 D 228410 CDS NP_841918.1 30249848 1082853 2047045..2048652 1 NC_004757.1 carbon-nitrogen hydrolase:NAD+ synthase 2048652 nadE 1082853 nadE Nitrosomonas europaea ATCC 19718 carbon-nitrogen hydrolase:NAD+ synthase NP_841918.1 2047045 D 228410 CDS NP_841919.1 30249849 1082854 2048717..2050270 1 NC_004757.1 M48 family peptidase 2050270 1082854 NE1897 Nitrosomonas europaea ATCC 19718 M48 family peptidase NP_841919.1 2048717 D 228410 CDS NP_841920.1 30249850 1082855 2050345..2051490 1 NC_004757.1 hypothetical protein 2051490 1082855 NE1898 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841920.1 2050345 D 228410 CDS NP_841921.1 30249851 1082856 2051490..2052242 1 NC_004757.1 ABC transporter ATPase 2052242 1082856 NE1899 Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_841921.1 2051490 D 228410 CDS NP_841922.1 30249852 1082857 2052239..2053462 1 NC_004757.1 hypothetical protein 2053462 1082857 NE1900 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841922.1 2052239 D 228410 CDS NP_841923.1 30249853 1082858 2053858..2056776 1 NC_004757.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 2056776 1082858 NE1901 Nitrosomonas europaea ATCC 19718 monovalent cation/H+ antiporter subunit A NP_841923.1 2053858 D 228410 CDS NP_841924.1 30249854 1082859 2056776..2057120 1 NC_004757.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2057120 1082859 NE1902 Nitrosomonas europaea ATCC 19718 monovalent cation/H+ antiporter subunit C NP_841924.1 2056776 D 228410 CDS NP_841925.1 30249855 1082860 2057117..2058766 1 NC_004757.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 2058766 phaD 1082860 phaD Nitrosomonas europaea ATCC 19718 monovalent cation/H+ antiporter subunit D NP_841925.1 2057117 D 228410 CDS NP_841926.1 30249856 1082861 2058763..2059248 1 NC_004757.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 2059248 1082861 NE1904 Nitrosomonas europaea ATCC 19718 monovalent cation/H+ antiporter subunit E NP_841926.1 2058763 D 228410 CDS NP_841927.1 30249857 1082862 2059245..2059526 1 NC_004757.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit F 2059526 phaF 1082862 phaF Nitrosomonas europaea ATCC 19718 monovalent cation/H+ antiporter subunit F NP_841927.1 2059245 D 228410 CDS NP_841928.1 30249858 1082863 2059523..2059948 1 NC_004757.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 2059948 1082863 NE1906 Nitrosomonas europaea ATCC 19718 monovalent cation/H+ antiporter subunit G NP_841928.1 2059523 D 228410 CDS NP_841929.1 30249859 1082864 complement(2060192..2060476) 1 NC_004757.1 hypothetical protein 2060476 1082864 NE1907 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841929.1 2060192 R 228410 CDS NP_841930.1 30249860 1082865 complement(2060724..2061368) 1 NC_004757.1 glutathione S-transferase family protein 2061368 1082865 NE1908 Nitrosomonas europaea ATCC 19718 glutathione S-transferase family protein NP_841930.1 2060724 R 228410 CDS NP_841931.1 30249861 1082866 complement(2061632..2063482) 1 NC_004757.1 diguanylate cyclase/phosphodiesterase 2063482 1082866 NE1909 Nitrosomonas europaea ATCC 19718 diguanylate cyclase/phosphodiesterase NP_841931.1 2061632 R 228410 CDS NP_841932.1 30249862 1082867 2063794..2064282 1 NC_004757.1 inner membrane protein 2064282 yqaA 1082867 yqaA Nitrosomonas europaea ATCC 19718 inner membrane protein NP_841932.1 2063794 D 228410 CDS NP_841933.1 30249863 1082868 complement(2064316..2064624) 1 NC_004757.1 glutaredoxin-like protein 2064624 1082868 NE1911 Nitrosomonas europaea ATCC 19718 glutaredoxin-like protein NP_841933.1 2064316 R 228410 CDS NP_841934.1 30249864 1082869 complement(2064788..2065657) 1 NC_004757.1 hemK fam: modification methylase 2065657 1082869 NE1912 Nitrosomonas europaea ATCC 19718 hemK fam: modification methylase NP_841934.1 2064788 R 228410 CDS NP_841935.1 30249865 1082870 complement(2065654..2066733) 1 NC_004757.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2066733 prfA 1082870 prfA Nitrosomonas europaea ATCC 19718 peptide chain release factor 1 NP_841935.1 2065654 R 228410 CDS NP_841936.1 30249866 1082871 complement(2066733..2067983) 1 NC_004757.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2067983 hemA 1082871 hemA Nitrosomonas europaea ATCC 19718 glutamyl-tRNA reductase NP_841936.1 2066733 R 228410 CDS NP_841937.1 30249867 1082872 2068170..2069138 1 NC_004757.1 polyprenyl synthetase 2069138 ispB 1082872 ispB Nitrosomonas europaea ATCC 19718 polyprenyl synthetase NP_841937.1 2068170 D 228410 CDS NP_841938.1 30249868 1082874 2069882..2070307 1 NC_004757.1 hypothetical protein 2070307 1082874 NE1916 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841938.1 2069882 D 228410 CDS NP_841939.1 30249869 1082875 complement(2070581..2070883) 1 NC_004757.1 hypothetical protein 2070883 1082875 NE1917 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841939.1 2070581 R 228410 CDS NP_841940.1 30249870 1082876 complement(2070904..2073231) 1 NC_004757.1 von Willebrand factor type A domain-containing protein 2073231 cbbO 1082876 cbbO Nitrosomonas europaea ATCC 19718 von Willebrand factor type A domain-containing protein NP_841940.1 2070904 R 228410 CDS NP_841941.1 30249871 1082877 complement(2073273..2074076) 1 NC_004757.1 nitric oxide reductase NorQ protein 2074076 cbbQ 1082877 cbbQ Nitrosomonas europaea ATCC 19718 nitric oxide reductase NorQ protein NP_841941.1 2073273 R 228410 CDS NP_841942.1 30249872 1082878 complement(2074196..2074552) 1 NC_004757.1 ribulose bisphosphate carboxylase, small chain 2074552 cbbS 1082878 cbbS Nitrosomonas europaea ATCC 19718 ribulose bisphosphate carboxylase, small chain NP_841942.1 2074196 R 228410 CDS NP_841943.1 30249873 1082879 complement(2074616..2076037) 1 NC_004757.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 2076037 rbcL 1082879 rbcL Nitrosomonas europaea ATCC 19718 ribulose bisophosphate carboxylase NP_841943.1 2074616 R 228410 CDS NP_841944.1 30249874 1082880 2076232..2077161 1 NC_004757.1 transcription regulator LysR 2077161 cbbR 1082880 cbbR Nitrosomonas europaea ATCC 19718 transcription regulator LysR NP_841944.1 2076232 D 228410 CDS NP_841945.1 30249875 1082881 2077607..2078002 1 NC_004757.1 response regulator receiver domain-containing protein 2078002 cheY 1082881 cheY Nitrosomonas europaea ATCC 19718 response regulator receiver domain-containing protein NP_841945.1 2077607 D 228410 CDS NP_841946.1 30249876 1082882 2078048..2078668 1 NC_004757.1 chemotaxis protein CheZ 2078668 cheZ1 1082882 cheZ1 Nitrosomonas europaea ATCC 19718 chemotaxis protein CheZ NP_841946.1 2078048 D 228410 CDS NP_841947.1 30249877 1082883 complement(2078725..2079768) 1 NC_004757.1 integrase catalytic subunit 2079768 1082883 NE1925 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841947.1 2078725 R 228410 CDS NP_841948.1 30249878 1082884 complement(2079975..2080601) 1 NC_004757.1 carbonic anhydrase 2080601 1082884 NE1926 Nitrosomonas europaea ATCC 19718 carbonic anhydrase NP_841948.1 2079975 R 228410 CDS NP_841949.1 30249879 1082885 complement(2080640..2082259) 1 NC_004757.1 Sulfate transporter 2082259 1082885 NE1927 Nitrosomonas europaea ATCC 19718 Sulfate transporter NP_841949.1 2080640 R 228410 CDS NP_841950.1 30249880 1082886 complement(2082566..2083132) 1 NC_004757.1 Smr domain-containing protein 2083132 1082886 NE1928 Nitrosomonas europaea ATCC 19718 Smr domain-containing protein NP_841950.1 2082566 R 228410 CDS NP_841951.1 30249881 1082887 complement(2083165..2084118) 1 NC_004757.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2084118 trxB 1082887 trxB Nitrosomonas europaea ATCC 19718 FAD-dependent pyridine nucleotide-disulfide oxidoreductase NP_841951.1 2083165 R 228410 CDS NP_841952.1 30249882 1082888 complement(2084262..2086853) 1 NC_004757.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2086853 alaS 1082888 alaS Nitrosomonas europaea ATCC 19718 alanyl-tRNA synthetase NP_841952.1 2084262 R 228410 CDS NP_841953.1 30249883 1082889 complement(2086913..2087353) 1 NC_004757.1 RecX regulatory protein 2087353 recX 1082889 recX Nitrosomonas europaea ATCC 19718 RecX regulatory protein NP_841953.1 2086913 R 228410 CDS NP_841954.1 30249884 1082890 complement(2087356..2088387) 1 NC_004757.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2088387 recA 1082890 recA Nitrosomonas europaea ATCC 19718 recombinase A NP_841954.1 2087356 R 228410 CDS NP_841955.1 30249885 1082891 2088557..2089327 1 NC_004757.1 adenylate kinase 2089327 adk 1082891 adk Nitrosomonas europaea ATCC 19718 adenylate kinase NP_841955.1 2088557 D 228410 CDS NP_841956.1 30249886 1082892 2089391..2090650 1 NC_004757.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 2090650 1082892 NE1934 Nitrosomonas europaea ATCC 19718 6-phosphofructokinase NP_841956.1 2089391 D 228410 CDS NP_841957.1 30249887 1082893 2090790..2092847 1 NC_004757.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 2092847 hppA 1082893 hppA Nitrosomonas europaea ATCC 19718 membrane-bound proton-translocating pyrophosphatase NP_841957.1 2090790 D 228410 CDS NP_841958.1 30249888 1082894 complement(2092868..2093125) 1 NC_004757.1 hypothetical protein 2093125 1082894 NE1936 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841958.1 2092868 R 228410 CDS NP_841959.1 30249889 1082895 2093220..2093951 1 NC_004757.1 hypothetical protein 2093951 1082895 NE1937 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841959.1 2093220 D 228410 CDS NP_841960.1 30249890 1082898 complement(2094814..2095764) 1 NC_004757.1 integrase catalytic subunit 2095764 1082898 NE1940 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_841960.1 2094814 R 228410 CDS NP_841961.1 30249891 1082901 2096770..2097423 1 NC_004757.1 hypothetical protein 2097423 1082901 NE1943 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841961.1 2096770 D 228410 CDS NP_841962.1 30249892 1082902 2097768..2098310 1 NC_004757.1 hypothetical protein 2098310 1082902 NE1944 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841962.1 2097768 D 228410 CDS NP_841963.1 30249893 1082903 2098373..2099557 1 NC_004757.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2099557 1082903 NE1945 Nitrosomonas europaea ATCC 19718 FAD-dependent pyridine nucleotide-disulfide oxidoreductase NP_841963.1 2098373 D 228410 CDS NP_841964.1 30249894 1082904 2099645..2100223 1 NC_004757.1 TetR family regulatory protein 2100223 1082904 NE1946 Nitrosomonas europaea ATCC 19718 TetR family regulatory protein NP_841964.1 2099645 D 228410 CDS NP_841965.1 30249895 1082905 2100568..2103840 1 NC_004757.1 hypothetical protein 2103840 yjeP 1082905 yjeP Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841965.1 2100568 D 228410 CDS NP_841966.1 30249896 1082906 complement(2103983..2105092) 1 NC_004757.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2105092 dnaJ 1082906 dnaJ Nitrosomonas europaea ATCC 19718 chaperone protein DnaJ NP_841966.1 2103983 R 228410 CDS NP_841967.1 30249897 1082907 complement(2105296..2107230) 1 NC_004757.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2107230 dnaK 1082907 dnaK Nitrosomonas europaea ATCC 19718 molecular chaperone DnaK NP_841967.1 2105296 R 228410 CDS NP_841968.1 30249898 1082908 complement(2107292..2107879) 1 NC_004757.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 2107879 grpE 1082908 grpE Nitrosomonas europaea ATCC 19718 heat shock protein GrpE NP_841968.1 2107292 R 228410 CDS NP_841969.1 30249899 1082909 complement(2108015..2109391) 1 NC_004757.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2109391 1082909 NE1951 Nitrosomonas europaea ATCC 19718 adenylosuccinate lyase NP_841969.1 2108015 R 228410 CDS NP_841970.1 30249900 1082910 2109518..2110132 1 NC_004757.1 glutathione S-transferase protein 2110132 1082910 NE1952 Nitrosomonas europaea ATCC 19718 glutathione S-transferase protein NP_841970.1 2109518 D 228410 CDS NP_841971.1 30249901 1082911 complement(2110218..2110958) 1 NC_004757.1 rRNA methyltransferase 2110958 1082911 NE1953 Nitrosomonas europaea ATCC 19718 rRNA methyltransferase NP_841971.1 2110218 R 228410 CDS NP_841972.1 30249902 1082912 2111003..2111830 1 NC_004757.1 suhB; inositol monophosphatase (extragenic suppressor protein) 2111830 suhB 1082912 suhB Nitrosomonas europaea ATCC 19718 suhB; inositol monophosphatase (extragenic suppressor protein) NP_841972.1 2111003 D 228410 CDS NP_841973.1 30249903 1082913 2111861..2112766 1 NC_004757.1 mce related protein 2112766 1082913 NE1955 Nitrosomonas europaea ATCC 19718 mce related protein NP_841973.1 2111861 D 228410 CDS NP_841974.1 30249904 1082914 2112766..2113383 1 NC_004757.1 lipoprotein 2113383 1082914 NE1956 Nitrosomonas europaea ATCC 19718 lipoprotein NP_841974.1 2112766 D 228410 CDS NP_841975.1 30249905 1082915 2113596..2114849 1 NC_004757.1 Orn/DAP/Arg decarboxylase family protein 2114849 1082915 NE1957 Nitrosomonas europaea ATCC 19718 Orn/DAP/Arg decarboxylase family protein NP_841975.1 2113596 D 228410 CDS NP_841976.1 30249906 1082916 2114859..2115911 1 NC_004757.1 squalene and phytoene synthase 2115911 fdfT 1082916 fdfT Nitrosomonas europaea ATCC 19718 squalene and phytoene synthase NP_841976.1 2114859 D 228410 CDS NP_841977.1 30249907 1082917 complement(2115906..2116601) 1 NC_004757.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2116601 pyrF 1082917 pyrF Nitrosomonas europaea ATCC 19718 orotidine 5'-phosphate decarboxylase NP_841977.1 2115906 R 228410 CDS NP_841978.1 30249908 1082919 complement(2116967..2117284) 1 NC_004757.1 histone-like DNA-binding protein 2117284 ihfB 1082919 ihfB Nitrosomonas europaea ATCC 19718 histone-like DNA-binding protein NP_841978.1 2116967 R 228410 CDS NP_841979.1 30249909 1082920 complement(2117293..2119011) 1 NC_004757.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2119011 rpsA 1082920 rpsA Nitrosomonas europaea ATCC 19718 30S ribosomal protein S1 NP_841979.1 2117293 R 228410 CDS NP_841980.1 30249910 1082921 complement(2119117..2119788) 1 NC_004757.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2119788 cmk 1082921 cmk Nitrosomonas europaea ATCC 19718 cytidylate kinase NP_841980.1 2119117 R 228410 CDS NP_841981.1 30249911 1082922 complement(2119969..2121264) 1 NC_004757.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2121264 aroA 1082922 aroA Nitrosomonas europaea ATCC 19718 3-phosphoshikimate 1-carboxyvinyltransferase NP_841981.1 2119969 R 228410 CDS NP_841982.1 30249912 1082923 2121623..2121874 1 NC_004757.1 hypothetical protein 2121874 1082923 NE1965 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841982.1 2121623 D 228410 CDS NP_841983.1 30249913 1082924 complement(2121919..2124417) 1 NC_004757.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 2124417 topB 1082924 topB Nitrosomonas europaea ATCC 19718 DNA topoisomerase III NP_841983.1 2121919 R 228410 CDS NP_841984.1 30249914 1082925 complement(2124545..2125003) 1 NC_004757.1 hypothetical protein 2125003 smg 1082925 smg Nitrosomonas europaea ATCC 19718 hypothetical protein NP_841984.1 2124545 R 228410 CDS NP_841985.1 30249915 1082926 complement(2125084..2126199) 1 NC_004757.1 SMF family protein 2126199 smf 1082926 smf Nitrosomonas europaea ATCC 19718 SMF family protein NP_841985.1 2125084 R 228410 CDS NP_841986.1 30249916 1082927 complement(2126305..2127333) 1 NC_004757.1 LysM domain-containing protein 2127333 1082927 NE1969 Nitrosomonas europaea ATCC 19718 LysM domain-containing protein NP_841986.1 2126305 R 228410 CDS NP_841987.1 30249917 1082928 2127444..2128001 1 NC_004757.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2128001 def 1082928 def Nitrosomonas europaea ATCC 19718 peptide deformylase NP_841987.1 2127444 D 228410 CDS NP_841988.1 30249918 1082929 2128063..2129037 1 NC_004757.1 formyl transferase N-terminus:methionyl-tRNA formyltransferase 2129037 fmt 1082929 fmt Nitrosomonas europaea ATCC 19718 formyl transferase N-terminus:methionyl-tRNA formyltransferase NP_841988.1 2128063 D 228410 CDS NP_841989.1 30249919 1082930 2129034..2130314 1 NC_004757.1 sun; rRNA methylase 2130314 1082930 NE1972 Nitrosomonas europaea ATCC 19718 sun; rRNA methylase NP_841989.1 2129034 D 228410 CDS NP_841990.1 30249920 1082931 2130370..2130927 1 NC_004757.1 proline rich signal peptide protein 2130927 1082931 NE1973 Nitrosomonas europaea ATCC 19718 proline rich signal peptide protein NP_841990.1 2130370 D 228410 CDS NP_841991.1 30249921 1082932 2130981..2133110 1 NC_004757.1 sensory transduction histidine kinase 2133110 1082932 NE1974 Nitrosomonas europaea ATCC 19718 sensory transduction histidine kinase NP_841991.1 2130981 D 228410 CDS NP_841992.1 30249922 1082933 2133352..2134617 1 NC_004757.1 similar to (NC_003112) nitrogen assimilation regulatory protein NtrX [Neisseria meningitidis MC58], evalue=2.00e-95, 46% identity; NtrX; nitrogen assimilation regulatory protein 2134617 1082933 NE1975 Nitrosomonas europaea ATCC 19718 NtrX; nitrogen assimilation regulatory protein NP_841992.1 2133352 D 228410 CDS NP_841993.1 30249923 1082936 complement(2135084..2136037) 1 NC_004757.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2136037 miaA 1082936 miaA Nitrosomonas europaea ATCC 19718 tRNA delta(2)-isopentenylpyrophosphate transferase NP_841993.1 2135084 R 228410 CDS NP_841994.1 30249924 1082937 2136194..2136385 1 NC_004757.1 transmembrane protein 2136385 1082937 NE1977 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_841994.1 2136194 D 228410 CDS NP_841995.1 30249925 1082938 complement(2136454..2139963) 1 NC_004757.1 dnaE1; DNA polymerase III (alpha chain) protein 2139963 dnaE1 1082938 dnaE1 Nitrosomonas europaea ATCC 19718 dnaE1; DNA polymerase III (alpha chain) protein NP_841995.1 2136454 R 228410 CDS NP_841996.1 30249926 1082939 2140070..2141431 1 NC_004757.1 U32 family peptidase 2141431 1082939 NE1979 Nitrosomonas europaea ATCC 19718 U32 family peptidase NP_841996.1 2140070 D 228410 CDS NP_841997.1 30249927 1082940 2141563..2142198 1 NC_004757.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 2142198 aroK 1082940 aroK Nitrosomonas europaea ATCC 19718 shikimate kinase NP_841997.1 2141563 D 228410 CDS NP_841998.1 30249928 1082941 2142301..2143410 1 NC_004757.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 2143410 aroB 1082941 aroB Nitrosomonas europaea ATCC 19718 3-dehydroquinate synthase NP_841998.1 2142301 D 228410 CDS NP_841999.1 30249929 1082942 2143403..2144527 1 NC_004757.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2144527 dgt 1082942 dgt Nitrosomonas europaea ATCC 19718 deoxyguanosinetriphosphate triphosphohydrolase-like protein NP_841999.1 2143403 D 228410 CDS NP_842000.1 30249930 1082943 2144656..2145354 1 NC_004757.1 hypothetical protein 2145354 1082943 NE1983 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842000.1 2144656 D 228410 CDS NP_842001.1 30249931 1082944 complement(2145407..2147062) 1 NC_004757.1 transmembrane protein 2147062 1082944 NE1984 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_842001.1 2145407 R 228410 CDS NP_842002.1 30249932 1082945 complement(2147070..2147363) 1 NC_004757.1 hypothetical protein 2147363 1082945 NE1985 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842002.1 2147070 R 228410 CDS NP_842003.1 30249933 1082946 complement(2147365..2147631) 1 NC_004757.1 hypothetical protein 2147631 1082946 NE1986 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842003.1 2147365 R 228410 CDS NP_842004.1 30249934 1082949 complement(2150245..2151255) 1 NC_004757.1 transmembrane sensor 2151255 1082949 NE1989 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_842004.1 2150245 R 228410 CDS NP_842005.1 30249935 1082950 2151366..2151773 1 NC_004757.1 transposase 2151773 1082950 NE1990 Nitrosomonas europaea ATCC 19718 transposase NP_842005.1 2151366 D 228410 CDS NP_842006.1 30249936 1082951 2151773..2152141 1 NC_004757.1 IS4 family transposase 2152141 1082951 NE1991 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_842006.1 2151773 D 228410 CDS NP_842007.1 30249937 1082952 complement(2152247..2152786) 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 2152786 1082952 NE1992 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_842007.1 2152247 R 228410 CDS NP_842008.1 30249938 1082953 2152864..2153154 1 NC_004757.1 hypothetical protein 2153154 1082953 NE1993 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842008.1 2152864 D 228410 CDS NP_842009.1 30249939 1082954 complement(2153359..2155314) 1 NC_004757.1 hypothetical protein 2155314 1082954 NE1994 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842009.1 2153359 R 228410 CDS NP_842010.1 30249940 1082955 complement(2155540..2156391) 1 NC_004757.1 integrase catalytic subunit 2156391 1082955 NE1995 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842010.1 2155540 R 228410 CDS NP_842011.1 30249941 1082956 complement(2156445..2156768) 1 NC_004757.1 transposase IS911 2156768 1082956 NE1996 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_842011.1 2156445 R 228410 CDS NP_842012.1 30249942 1082957 2157522..2158763 1 NC_004757.1 glucose dehydrogenase 2158763 1082957 NE1997 Nitrosomonas europaea ATCC 19718 glucose dehydrogenase NP_842012.1 2157522 D 228410 CDS NP_842013.1 30249943 1082958 2159012..2159341 1 NC_004757.1 SohA; PrlF; involved in protein secretion; when overproduced or mutated, it induces growth defect and increased export of a reporter protein; a PrlF mutation induces the activity of the Lon protease, and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation; regulator PrlF 2159341 sohA 1082958 sohA Nitrosomonas europaea ATCC 19718 regulator PrlF NP_842013.1 2159012 D 228410 CDS NP_842014.1 30249944 1082959 2159338..2159841 1 NC_004757.1 hypothetical protein 2159841 1082959 NE1999 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842014.1 2159338 D 228410 CDS NP_842015.1 30249945 1082960 complement(2159943..2161274) 1 NC_004757.1 aldehyde dehydrogenase 2161274 gabD 1082960 gabD Nitrosomonas europaea ATCC 19718 aldehyde dehydrogenase NP_842015.1 2159943 R 228410 CDS NP_842016.1 30249946 1082961 complement(2161321..2162445) 1 NC_004757.1 hypothetical protein 2162445 1082961 NE2001 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842016.1 2161321 R 228410 CDS NP_842017.1 30249947 1082962 2162833..2163699 1 NC_004757.1 hypothetical protein 2163699 1082962 NE2002 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842017.1 2162833 D 228410 CDS NP_842018.1 30249948 1082963 2163869..2164321 1 NC_004757.1 nitric oxide reductase, cytochrome c-containing subunit 2164321 1082963 NE2003 Nitrosomonas europaea ATCC 19718 nitric oxide reductase, cytochrome c-containing subunit NP_842018.1 2163869 D 228410 CDS NP_842019.1 30249949 1082964 2164358..2165704 1 NC_004757.1 cytochrome c oxidase subunit I 2165704 norB 1082964 norB Nitrosomonas europaea ATCC 19718 cytochrome c oxidase subunit I NP_842019.1 2164358 D 228410 CDS NP_842020.1 30249950 1082965 2165754..2166533 1 NC_004757.1 norQ protein 2166533 1082965 NE2005 Nitrosomonas europaea ATCC 19718 norQ protein NP_842020.1 2165754 D 228410 CDS NP_842021.1 30249951 1082966 2166539..2168491 1 NC_004757.1 von Willebrand factor type A domain-containing protein 2168491 norD 1082966 norD Nitrosomonas europaea ATCC 19718 von Willebrand factor type A domain-containing protein NP_842021.1 2166539 D 228410 CDS NP_842022.1 30249952 1082967 2169175..2169450 1 NC_004757.1 hypothetical protein 2169450 1082967 NE2007 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842022.1 2169175 D 228410 CDS NP_842023.1 30249953 1082970 2172449..2172856 1 NC_004757.1 transposase 2172856 1082970 NE2010 Nitrosomonas europaea ATCC 19718 transposase NP_842023.1 2172449 D 228410 CDS NP_842024.1 30249954 1082971 2172856..2173224 1 NC_004757.1 IS4 family transposase 2173224 1082971 NE2011 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_842024.1 2172856 D 228410 CDS NP_842025.1 30249955 1082972 2173285..2174235 1 NC_004757.1 integrase catalytic subunit 2174235 1082972 NE2012 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842025.1 2173285 D 228410 CDS NP_842026.1 30249956 1082973 complement(2174813..2175106) 1 NC_004757.1 hypothetical protein 2175106 1082973 NE2013 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842026.1 2174813 R 228410 CDS NP_842027.1 30249957 1082974 2176094..2176486 1 NC_004757.1 hypothetical protein 2176486 1082974 NE2014 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842027.1 2176094 D 228410 CDS NP_842028.1 30249958 1082975 2176468..2177304 1 NC_004757.1 capsular polysaccharide biosynthesis protein CapK 2177304 1082975 NE2015 Nitrosomonas europaea ATCC 19718 capsular polysaccharide biosynthesis protein CapK NP_842028.1 2176468 D 228410 CDS NP_842029.1 30249959 1082976 2177316..2178653 1 NC_004757.1 hypothetical protein 2178653 1082976 NE2016 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842029.1 2177316 D 228410 CDS NP_842030.1 30249960 1082977 2178657..2179331 1 NC_004757.1 hypothetical protein 2179331 1082977 NE2017 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842030.1 2178657 D 228410 CDS NP_842031.1 30249961 1082978 2179502..2180509 1 NC_004757.1 glycosyl transferase family protein 2180509 1082978 NE2018 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_842031.1 2179502 D 228410 CDS NP_842032.1 30249962 1082979 2180506..2181492 1 NC_004757.1 glycosyl transferase family protein 2181492 1082979 NE2019 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_842032.1 2180506 D 228410 CDS NP_842033.1 30249963 1082980 2181492..2183459 1 NC_004757.1 similar to (AF112478) bifunctional polymerase [Neisseria meningitidis], evalue=8.00e-46, 30% identity; galactosamine-containing minor teichoic acid biosynthesis 2183459 ggaB 1082980 ggaB Nitrosomonas europaea ATCC 19718 galactosamine-containing minor teichoic acid biosynthesis NP_842033.1 2181492 D 228410 CDS NP_842034.1 30249964 1082981 complement(2183474..2184754) 1 NC_004757.1 group 1 glycosyl transferase 2184754 1082981 NE2021 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_842034.1 2183474 R 228410 CDS NP_842035.1 30249965 1082982 complement(2184657..2186162) 1 NC_004757.1 polysaccharide biosynthesis protein 2186162 exoT 1082982 exoT Nitrosomonas europaea ATCC 19718 polysaccharide biosynthesis protein NP_842035.1 2184657 R 228410 CDS NP_842036.1 30249966 1082983 2186571..2186978 1 NC_004757.1 transposase 2186978 1082983 NE2023 Nitrosomonas europaea ATCC 19718 transposase NP_842036.1 2186571 D 228410 CDS NP_842037.1 30249967 1082984 2186978..2187346 1 NC_004757.1 IS4 family transposase 2187346 1082984 NE2024 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_842037.1 2186978 D 228410 CDS NP_842038.1 30249968 1082988 complement(2188842..2189804) 1 NC_004757.1 integrase catalytic subunit 2189804 1082988 NE2028 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842038.1 2188842 R 228410 CDS NP_842039.1 30249969 1082989 complement(2190147..2192351) 1 NC_004757.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 2192351 glgB 1082989 glgB Nitrosomonas europaea ATCC 19718 glycogen branching protein NP_842039.1 2190147 R 228410 CDS NP_842040.1 30249970 1082990 2192468..2193769 1 NC_004757.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 2193769 glgC 1082990 glgC Nitrosomonas europaea ATCC 19718 glucose-1-phosphate adenylyltransferase NP_842040.1 2192468 D 228410 CDS NP_842041.1 30249971 1082991 2193836..2195557 1 NC_004757.1 glycosyl hydrolase family protein 2195557 1082991 NE2031 Nitrosomonas europaea ATCC 19718 glycosyl hydrolase family protein NP_842041.1 2193836 D 228410 CDS NP_842042.1 30249972 1082992 2195628..2197640 1 NC_004757.1 glycosyl hydrolase family protein 2197640 amyA 1082992 amyA Nitrosomonas europaea ATCC 19718 glycosyl hydrolase family protein NP_842042.1 2195628 D 228410 CDS NP_842043.1 30249973 1082993 2197768..2200464 1 NC_004757.1 hypothetical protein 2200464 1082993 NE2033 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842043.1 2197768 D 228410 CDS NP_842044.1 30249974 1082994 2200702..2201898 1 NC_004757.1 inner membrane protein 2201898 1082994 NE2034 Nitrosomonas europaea ATCC 19718 inner membrane protein NP_842044.1 2200702 D 228410 CDS NP_842045.1 30249975 1082995 2201895..2202137 1 NC_004757.1 hypothetical protein 2202137 1082995 NE2035 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842045.1 2201895 D 228410 CDS NP_842046.1 30249976 1082996 complement(2202225..2205311) 1 NC_004757.1 acriflavin resistance protein 2205311 acrD4 1082996 acrD4 Nitrosomonas europaea ATCC 19718 acriflavin resistance protein NP_842046.1 2202225 R 228410 CDS NP_842047.1 30249977 1082997 complement(2205308..2206402) 1 NC_004757.1 cation-efflux system signal peptide protein 2206402 1082997 NE2037 Nitrosomonas europaea ATCC 19718 cation-efflux system signal peptide protein NP_842047.1 2205308 R 228410 CDS NP_842048.1 30249978 1082998 complement(2207237..2208751) 1 NC_004757.1 myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit 2208751 1082998 NE2038 Nitrosomonas europaea ATCC 19718 myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit NP_842048.1 2207237 R 228410 CDS NP_842049.1 30249979 1082999 complement(2208755..2209015) 1 NC_004757.1 hypothetical protein 2209015 1082999 NE2039 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842049.1 2208755 R 228410 CDS NP_842050.1 30249980 1083000 complement(2209232..2210728) 1 NC_004757.1 rhlE; ATP-dependent RNA helicase RhlE 2210728 rhlE 1083000 rhlE Nitrosomonas europaea ATCC 19718 rhlE; ATP-dependent RNA helicase RhlE NP_842050.1 2209232 R 228410 CDS NP_842051.1 30249981 1083001 complement(2210886..2211683) 1 NC_004757.1 hypothetical protein 2211683 1083001 NE2041 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842051.1 2210886 R 228410 CDS NP_842052.1 30249982 1083002 complement(2211937..2212644) 1 NC_004757.1 similar to Cytochrome c-554 precursor (C554) (Hydroxylamine oxidoreductase-linked cytochrome) pir||A59036 cytochrome c554, tetraheme, precursor - Nitrosomonas europaea; cytochrome c-554 2212644 cycA2 1083002 cycA2 Nitrosomonas europaea ATCC 19718 cytochrome c-554 NP_842052.1 2211937 R 228410 CDS NP_842053.1 30249983 1083003 complement(2212700..2213809) 1 NC_004757.1 hypothetical protein 2213809 1083003 NE2043 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842053.1 2212700 R 228410 CDS NP_842054.1 30249984 1083004 complement(2213806..2215518) 1 NC_004757.1 similar to (AB030386) hydroxylamine oxidoreductase [Nitrosomonas sp. ENI-11], evalue=0.00e+00, 95% identity; hydroxylamine oxidoreductase 2215518 hao1 1083004 hao1 Nitrosomonas europaea ATCC 19718 hydroxylamine oxidoreductase NP_842054.1 2213806 R 228410 CDS NP_842055.1 30249985 1083005 complement(2215733..2219947) 1 NC_004757.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 2219947 rpoC 1083005 rpoC Nitrosomonas europaea ATCC 19718 DNA-directed RNA polymerase subunit beta' NP_842055.1 2215733 R 228410 CDS NP_842056.1 30249986 1083006 complement(2220094..2224167) 1 NC_004757.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 2224167 rpoB 1083006 rpoB Nitrosomonas europaea ATCC 19718 DNA-directed RNA polymerase subunit beta NP_842056.1 2220094 R 228410 CDS NP_842057.1 30249987 1083007 complement(2224503..2224877) 1 NC_004757.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 2224877 rplL 1083007 rplL Nitrosomonas europaea ATCC 19718 50S ribosomal protein L7/L12 NP_842057.1 2224503 R 228410 CDS NP_842058.1 30249988 1083008 complement(2224948..2225463) 1 NC_004757.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 2225463 rplJ 1083008 rplJ Nitrosomonas europaea ATCC 19718 50S ribosomal protein L10 NP_842058.1 2224948 R 228410 CDS NP_842059.2 161511226 1083009 complement(2225768..2226460) 1 NC_004757.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 2226460 rplA 1083009 rplA Nitrosomonas europaea ATCC 19718 50S ribosomal protein L1 NP_842059.2 2225768 R 228410 CDS NP_842060.1 30249990 1083010 complement(2226462..2226893) 1 NC_004757.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 2226893 rplK 1083010 rplK Nitrosomonas europaea ATCC 19718 50S ribosomal protein L11 NP_842060.1 2226462 R 228410 CDS NP_842061.1 30249991 1083011 complement(2227018..2227551) 1 NC_004757.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 2227551 nusG 1083011 nusG Nitrosomonas europaea ATCC 19718 transcription antitermination protein NusG NP_842061.1 2227018 R 228410 CDS NP_842062.1 30249992 1083013 complement(2228137..2229327) 1 NC_004757.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2229327 tuf2 1083013 tuf2 Nitrosomonas europaea ATCC 19718 elongation factor Tu NP_842062.1 2228137 R 228410 CDS NP_842063.1 30249993 1083014 complement(2229358..2231448) 1 NC_004757.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2231448 fusA1 1083014 fusA1 Nitrosomonas europaea ATCC 19718 elongation factor G NP_842063.1 2229358 R 228410 CDS NP_842064.1 30249994 1083015 complement(2231521..2231991) 1 NC_004757.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 2231991 rpsG 1083015 rpsG Nitrosomonas europaea ATCC 19718 30S ribosomal protein S7 NP_842064.1 2231521 R 228410 CDS NP_842065.1 30249995 1083016 complement(2232068..2232445) 1 NC_004757.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 2232445 rpsL 1083016 rpsL Nitrosomonas europaea ATCC 19718 30S ribosomal protein S12 NP_842065.1 2232068 R 228410 CDS NP_842066.1 30249996 1083017 complement(2232831..2233379) 1 NC_004757.1 hypothetical protein 2233379 1083017 NE2056 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842066.1 2232831 R 228410 CDS NP_842067.1 30249997 1083018 complement(2233804..2234361) 1 NC_004757.1 hypothetical protein 2234361 1083018 NE2057 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842067.1 2233804 R 228410 CDS NP_842068.1 30249998 1083019 complement(2234477..2236624) 1 NC_004757.1 cytochrome c, class IC:cytochrome c, class I 2236624 1083019 NE2058 Nitrosomonas europaea ATCC 19718 cytochrome c, class IC:cytochrome c, class I NP_842068.1 2234477 R 228410 CDS NP_842069.1 30249999 1083020 complement(2236643..2237065) 1 NC_004757.1 copper export proteins 2237065 1083020 NE2059 Nitrosomonas europaea ATCC 19718 copper export proteins NP_842069.1 2236643 R 228410 CDS NP_842070.1 30250000 1083021 complement(2237159..2237713) 1 NC_004757.1 hypothetical protein 2237713 1083021 NE2060 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842070.1 2237159 R 228410 CDS NP_842071.1 30250001 1083022 complement(2237798..2238433) 1 NC_004757.1 hypothetical protein 2238433 1083022 NE2061 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842071.1 2237798 R 228410 CDS NP_842072.1 30250002 1083023 complement(2238597..2239859) 1 NC_004757.1 ammonia monooxygenase subunit B 2239859 amoB2 1083023 amoB2 Nitrosomonas europaea ATCC 19718 ammonia monooxygenase subunit B NP_842072.1 2238597 R 228410 CDS NP_842073.1 30250003 1083024 complement(2239861..2240691) 1 NC_004757.1 ammonia monooxygenase subunit A 2240691 amoA2 1083024 amoA2 Nitrosomonas europaea ATCC 19718 ammonia monooxygenase subunit A NP_842073.1 2239861 R 228410 CDS NP_842074.1 30250004 1083025 complement(2240855..2241670) 1 NC_004757.1 similar to (AB079055) ammonia monooxygenase subunit C2 [Nitrosomonas sp. ENI-11], evalue=1.0e-160, 95% identity; ammonia monooxygenase subunit C 2241670 amoC2 1083025 amoC2 Nitrosomonas europaea ATCC 19718 ammonia monooxygenase subunit C NP_842074.1 2240855 R 228410 CDS NP_842075.1 30250005 1083026 complement(2243003..2243923) 1 NC_004757.1 rare lipoprotein A 2243923 1083026 NE2065 Nitrosomonas europaea ATCC 19718 rare lipoprotein A NP_842075.1 2243003 R 228410 CDS NP_842076.1 30250006 1083027 complement(2243928..2245037) 1 NC_004757.1 cell cycle proteins 2245037 mdrB 1083027 mdrB Nitrosomonas europaea ATCC 19718 cell cycle proteins NP_842076.1 2243928 R 228410 CDS NP_842077.1 30250007 1083028 complement(2245148..2247025) 1 NC_004757.1 penicillin binding protein transpeptidase domain-containing protein 2247025 1083028 NE2067 Nitrosomonas europaea ATCC 19718 penicillin binding protein transpeptidase domain-containing protein NP_842077.1 2245148 R 228410 CDS NP_842078.1 30250008 1083029 complement(2247022..2247573) 1 NC_004757.1 rod shape-determining MreD transmembrane protein 2247573 mreD 1083029 mreD Nitrosomonas europaea ATCC 19718 rod shape-determining MreD transmembrane protein NP_842078.1 2247022 R 228410 CDS NP_842079.1 30250009 1083030 complement(2247530..2248447) 1 NC_004757.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 2248447 mreC 1083030 mreC Nitrosomonas europaea ATCC 19718 rod shape-determining protein MreC NP_842079.1 2247530 R 228410 CDS NP_842080.1 30250010 1083031 complement(2248810..2249871) 1 NC_004757.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2249871 mreB 1083031 mreB Nitrosomonas europaea ATCC 19718 rod shape-determining protein MreB NP_842080.1 2248810 R 228410 CDS NP_842081.1 30250011 1083032 2250030..2250317 1 NC_004757.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 2250317 gatC 1083032 gatC Nitrosomonas europaea ATCC 19718 aspartyl/glutamyl-tRNA amidotransferase subunit C NP_842081.1 2250030 D 228410 CDS NP_842082.1 30250012 1083033 2250380..2251840 1 NC_004757.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2251840 gatA 1083033 gatA Nitrosomonas europaea ATCC 19718 aspartyl/glutamyl-tRNA amidotransferase subunit A NP_842082.1 2250380 D 228410 CDS NP_842083.1 30250013 1083034 2251896..2253332 1 NC_004757.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2253332 gatB 1083034 gatB Nitrosomonas europaea ATCC 19718 aspartyl/glutamyl-tRNA amidotransferase subunit B NP_842083.1 2251896 D 228410 CDS NP_842084.1 30250014 1083035 complement(2253952..2254386) 1 NC_004757.1 HSP20 family protein 2254386 1083035 NE2074 Nitrosomonas europaea ATCC 19718 HSP20 family protein NP_842084.1 2253952 R 228410 CDS NP_842085.1 30250015 1083036 complement(2254620..2257505) 1 NC_004757.1 diguanylate cyclase/phosphodiesterase 2257505 1083036 NE2075 Nitrosomonas europaea ATCC 19718 diguanylate cyclase/phosphodiesterase NP_842085.1 2254620 R 228410 CDS NP_842086.1 30250016 1083037 complement(2257505..2259325) 1 NC_004757.1 LysM domain-containing protein 2259325 1083037 NE2076 Nitrosomonas europaea ATCC 19718 LysM domain-containing protein NP_842086.1 2257505 R 228410 CDS NP_842087.1 30250017 1083038 2259410..2260438 1 NC_004757.1 hypothetical protein 2260438 1083038 NE2077 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842087.1 2259410 D 228410 CDS NP_842088.1 30250018 1083039 2260425..2260784 1 NC_004757.1 flagellar biosynthetic protein 2260784 ylqH 1083039 ylqH Nitrosomonas europaea ATCC 19718 flagellar biosynthetic protein NP_842088.1 2260425 D 228410 CDS NP_842089.1 30250019 1083040 complement(2260927..2261724) 1 NC_004757.1 hypothetical protein 2261724 1083040 NE2079 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842089.1 2260927 R 228410 CDS NP_842090.1 30250020 1083041 complement(2261756..2262085) 1 NC_004757.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 2262085 fliE 1083041 fliE Nitrosomonas europaea ATCC 19718 flagellar hook-basal body protein FliE NP_842090.1 2261756 R 228410 CDS NP_842091.1 30250021 1083042 complement(2262244..2263557) 1 NC_004757.1 similar to (NC_002505) sigma-54 dependent response regulator [Vibrio cholerae], evalue=1.00e-116, 52% identity; sigma-54 dependent response regulator 2263557 1083042 NE2081 Nitrosomonas europaea ATCC 19718 sigma-54 dependent response regulator NP_842091.1 2262244 R 228410 CDS NP_842092.1 30250022 1083043 complement(2263571..2264806) 1 NC_004757.1 two-component sensor 2264806 fleS 1083043 fleS Nitrosomonas europaea ATCC 19718 two-component sensor NP_842092.1 2263571 R 228410 CDS NP_842093.1 30250023 1083044 2265038..2266684 1 NC_004757.1 flagellar M-ring transmembrane protein FliF 2266684 fliF 1083044 fliF Nitrosomonas europaea ATCC 19718 flagellar M-ring transmembrane protein FliF NP_842093.1 2265038 D 228410 CDS NP_842094.1 30250024 1083045 2266674..2267669 1 NC_004757.1 flagellar motor switch protein FliG 2267669 fliG 1083045 fliG Nitrosomonas europaea ATCC 19718 flagellar motor switch protein FliG NP_842094.1 2266674 D 228410 CDS NP_842095.1 30250025 1083046 2267867..2268586 1 NC_004757.1 flagellar assembly protein FliH 2268586 fliH 1083046 fliH Nitrosomonas europaea ATCC 19718 flagellar assembly protein FliH NP_842095.1 2267867 D 228410 CDS NP_842096.1 30250026 1083047 2268583..2270019 1 NC_004757.1 flagellar ATP synthase 2270019 fliI 1083047 fliI Nitrosomonas europaea ATCC 19718 flagellar ATP synthase NP_842096.1 2268583 D 228410 CDS NP_842097.1 30250027 1083048 2270037..2270489 1 NC_004757.1 flagellar FliJ protein 2270489 fliJ 1083048 fliJ Nitrosomonas europaea ATCC 19718 flagellar FliJ protein NP_842097.1 2270037 D 228410 CDS NP_842098.1 30250028 1083049 2270548..2271693 1 NC_004757.1 flagellar hook-length control protein 2271693 1083049 NE2088 Nitrosomonas europaea ATCC 19718 flagellar hook-length control protein NP_842098.1 2270548 D 228410 CDS NP_842099.1 30250029 1083050 2271959..2274154 1 NC_004757.1 ice nucleation protein 2274154 1083050 NE2089 Nitrosomonas europaea ATCC 19718 ice nucleation protein NP_842099.1 2271959 D 228410 CDS NP_842100.1 30250030 1083051 2274342..2274968 1 NC_004757.1 hypothetical protein 2274968 1083051 NE2090 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842100.1 2274342 D 228410 CDS NP_842101.1 30250031 1083052 2274961..2275983 1 NC_004757.1 hypothetical protein 2275983 1083052 NE2091 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842101.1 2274961 D 228410 CDS NP_842102.1 30250032 1083053 2276159..2279728 1 NC_004757.1 TPR repeat-containing glycosyl transferase 2279728 1083053 NE2092 Nitrosomonas europaea ATCC 19718 TPR repeat-containing glycosyl transferase NP_842102.1 2276159 D 228410 CDS NP_842103.1 30250033 1083054 2279703..2280452 1 NC_004757.1 hypothetical protein 2280452 1083054 NE2093 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842103.1 2279703 D 228410 CDS NP_842104.1 30250034 1083055 2280753..2281766 1 NC_004757.1 hypothetical protein 2281766 1083055 NE2094 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842104.1 2280753 D 228410 CDS NP_842105.1 30250035 1083056 2281776..2283509 1 NC_004757.1 hypothetical protein 2283509 1083056 NE2095 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842105.1 2281776 D 228410 CDS NP_842106.1 30250036 1083057 2283635..2283958 1 NC_004757.1 transposase IS911 2283958 1083057 NE2096 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_842106.1 2283635 D 228410 CDS NP_842107.1 30250037 1083058 2284248..2284862 1 NC_004757.1 integrase catalytic subunit 2284862 1083058 NE2097 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842107.1 2284248 D 228410 CDS NP_842108.1 30250038 1083059 2285687..2287000 1 NC_004757.1 Leon G., Roy P.H., J. Bact. 185(6):2036-2041(2003); integron/retron-type RNA-directed DNA polymerase 2287000 1083059 NE2098 Nitrosomonas europaea ATCC 19718 integron/retron-type RNA-directed DNA polymerase NP_842108.1 2285687 D 228410 CDS NP_842109.1 30250039 1083060 complement(2287493..2288002) 1 NC_004757.1 hypothetical protein 2288002 1083060 NE2099 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842109.1 2287493 R 228410 CDS NP_842110.1 30250040 1083061 complement(2288019..2288522) 1 NC_004757.1 hypothetical protein 2288522 1083061 NE2100 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842110.1 2288019 R 228410 CDS NP_842111.1 30250041 1083062 2289108..2289320 1 NC_004757.1 hypothetical protein 2289320 1083062 NE2101 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842111.1 2289108 D 228410 CDS NP_842112.1 30250042 1083063 complement(2289895..2290194) 1 NC_004757.1 hypothetical protein 2290194 1083063 NE2102 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842112.1 2289895 R 228410 CDS NP_842113.1 30250043 1083064 complement(2290451..2290702) 1 NC_004757.1 CopG family transcriptional regulator 2290702 1083064 NE2103 Nitrosomonas europaea ATCC 19718 CopG family transcriptional regulator NP_842113.1 2290451 R 228410 CDS NP_842114.1 30250044 1083065 complement(2290692..2290955) 1 NC_004757.1 hypothetical protein 2290955 1083065 NE2104 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842114.1 2290692 R 228410 CDS NP_842115.1 30250045 1083066 complement(2291322..2291561) 1 NC_004757.1 hypothetical protein 2291561 1083066 NE2105 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842115.1 2291322 R 228410 CDS NP_842116.1 30250046 1083067 2291972..2292427 1 NC_004757.1 hypothetical protein 2292427 1083067 NE2106 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842116.1 2291972 D 228410 CDS NP_842117.1 30250047 1083068 2292427..2292885 1 NC_004757.1 hypothetical protein 2292885 1083068 NE2107 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842117.1 2292427 D 228410 CDS NP_842118.1 30250048 1083069 complement(2292950..2293801) 1 NC_004757.1 integrase catalytic subunit 2293801 1083069 NE2108 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842118.1 2292950 R 228410 CDS NP_842119.1 30250049 1083070 complement(2293855..2294178) 1 NC_004757.1 transposase IS911 2294178 1083070 NE2109 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_842119.1 2293855 R 228410 CDS NP_842120.1 30250050 1083071 complement(2294670..2295725) 1 NC_004757.1 AsnC family regulatory protein 2295725 1083071 NE2110 Nitrosomonas europaea ATCC 19718 AsnC family regulatory protein NP_842120.1 2294670 R 228410 CDS NP_842121.1 30250051 1083072 2296116..2296373 1 NC_004757.1 hypothetical protein 2296373 1083072 NE2111 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842121.1 2296116 D 228410 CDS NP_842122.1 30250052 1083073 2296379..2296795 1 NC_004757.1 PilT domain-containing protein 2296795 1083073 NE2112 Nitrosomonas europaea ATCC 19718 PilT domain-containing protein NP_842122.1 2296379 D 228410 CDS NP_842123.1 30250053 1083074 2297218..2297613 1 NC_004757.1 hypothetical protein 2297613 1083074 NE2113 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842123.1 2297218 D 228410 CDS NP_842124.1 30250054 1083075 complement(2297645..2297989) 1 NC_004757.1 plasmid stabilization protein ParE 2297989 1083075 NE2114 Nitrosomonas europaea ATCC 19718 plasmid stabilization protein ParE NP_842124.1 2297645 R 228410 CDS NP_842125.1 30250055 1083076 complement(2297986..2298231) 1 NC_004757.1 hypothetical protein 2298231 1083076 NE2115 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842125.1 2297986 R 228410 CDS NP_842126.1 30250056 1083080 2299357..2300505 1 NC_004757.1 hypothetical protein 2300505 1083080 NE2119 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842126.1 2299357 D 228410 CDS NP_842127.1 30250057 1083082 2301589..2303139 1 NC_004757.1 hypothetical protein 2303139 1083082 NE2121 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842127.1 2301589 D 228410 CDS NP_842128.1 30250058 1083083 complement(2303227..2304081) 1 NC_004757.1 bifunctional nicotinate-nucleotide pyrophosphorylase/quinolinate phosphoribosyltransferase NadC 2304081 nadC 1083083 nadC Nitrosomonas europaea ATCC 19718 bifunctional nicotinate-nucleotide pyrophosphorylase/quinolinate phosphoribosyltransferase NadC NP_842128.1 2303227 R 228410 CDS NP_842129.1 30250059 1083084 2304125..2305618 1 NC_004757.1 ferredoxin-dependent glutamate synthase 2305618 1083084 NE2123 Nitrosomonas europaea ATCC 19718 ferredoxin-dependent glutamate synthase NP_842129.1 2304125 D 228410 CDS NP_842130.1 30250060 1083085 2306060..2308258 1 NC_004757.1 TonB-dependent receptor protein 2308258 1083085 NE2124 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_842130.1 2306060 D 228410 CDS NP_842131.1 30250061 1083086 2308275..2308958 1 NC_004757.1 hydroxylase 2308958 fiu 1083086 fiu Nitrosomonas europaea ATCC 19718 hydroxylase NP_842131.1 2308275 D 228410 CDS NP_842132.1 30250062 1083087 2308958..2310043 1 NC_004757.1 glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal 2310043 1083087 NE2126 Nitrosomonas europaea ATCC 19718 glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal NP_842132.1 2308958 D 228410 CDS NP_842133.1 30250063 1083088 complement(2310169..2310747) 1 NC_004757.1 pgsA: CDP-diacylglycerol--glycerol-3-phosphatidyltransferase 2310747 pgsA 1083088 pgsA Nitrosomonas europaea ATCC 19718 pgsA: CDP-diacylglycerol--glycerol-3-phosphatidyltransferase NP_842133.1 2310169 R 228410 CDS NP_842134.1 30250064 1083091 complement(2312486..2312899) 1 NC_004757.1 transcription elongation factor GreA/GreB 2312899 rnk 1083091 rnk Nitrosomonas europaea ATCC 19718 transcription elongation factor GreA/GreB NP_842134.1 2312486 R 228410 CDS NP_842135.1 30250065 1083092 complement(2313178..2313900) 1 NC_004757.1 response regulator PhoB 2313900 phoB 1083092 phoB Nitrosomonas europaea ATCC 19718 response regulator PhoB NP_842135.1 2313178 R 228410 CDS NP_842136.1 30250066 1083094 complement(2314607..2315854) 1 NC_004757.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2315854 lysC 1083094 lysC Nitrosomonas europaea ATCC 19718 aspartate kinase NP_842136.1 2314607 R 228410 CDS NP_842137.1 30250067 1083095 complement(2316050..2316637) 1 NC_004757.1 peptidoglycan binding domain-containing protein 2316637 1083095 NE2133 Nitrosomonas europaea ATCC 19718 peptidoglycan binding domain-containing protein NP_842137.1 2316050 R 228410 CDS NP_842138.1 30250068 1083096 2316814..2318064 1 NC_004757.1 acetate and butyrate kinase:acetate kinase 2318064 ackA2 1083096 ackA2 Nitrosomonas europaea ATCC 19718 acetate and butyrate kinase:acetate kinase NP_842138.1 2316814 D 228410 CDS NP_842139.1 30250069 1083097 2318109..2320481 1 NC_004757.1 phosphoketolase 2320481 1083097 NE2135 Nitrosomonas europaea ATCC 19718 phosphoketolase NP_842139.1 2318109 D 228410 CDS NP_842140.1 30250070 1083098 complement(2320780..2321874) 1 NC_004757.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase 2321874 tal 1083098 tal Nitrosomonas europaea ATCC 19718 transaldolase NP_842140.1 2320780 R 228410 CDS NP_842141.1 30250071 1083099 2322115..2323395 1 NC_004757.1 methylamine utilization protein MauG 2323395 1083099 NE2137 Nitrosomonas europaea ATCC 19718 methylamine utilization protein MauG NP_842141.1 2322115 D 228410 CDS NP_842142.1 30250072 1083100 2323604..2324113 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 2324113 1083100 NE2138 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_842142.1 2323604 D 228410 CDS NP_842143.1 30250073 1083101 2324120..2325082 1 NC_004757.1 transmembrane sensor 2325082 1083101 NE2139 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_842143.1 2324120 D 228410 CDS NP_842144.1 30250074 1083102 2325161..2327458 1 NC_004757.1 TonB-dependent receptor protein 2327458 1083102 NE2140 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_842144.1 2325161 D 228410 CDS NP_842145.1 30250075 1083103 2327519..2328838 1 NC_004757.1 sodium/dicarboxylate symporter family protein 2328838 1083103 NE2141 Nitrosomonas europaea ATCC 19718 sodium/dicarboxylate symporter family protein NP_842145.1 2327519 D 228410 CDS NP_842146.1 30250076 1083104 2328995..2329309 1 NC_004757.1 hypothetical protein 2329309 1083104 NE2142 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842146.1 2328995 D 228410 CDS NP_842147.1 30250077 1083105 2329323..2329940 1 NC_004757.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 2329940 rps4 1083105 rps4 Nitrosomonas europaea ATCC 19718 30S ribosomal protein S4 NP_842147.1 2329323 D 228410 CDS NP_842148.1 30250078 1083106 complement(2330053..2330919) 1 NC_004757.1 hypothetical protein 2330919 1083106 NE2144 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842148.1 2330053 R 228410 CDS NP_842149.1 30250079 1083107 complement(2331124..2331633) 1 NC_004757.1 hypothetical protein 2331633 1083107 NE2145 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842149.1 2331124 R 228410 CDS NP_842150.1 30250080 1083108 complement(2331664..2332008) 1 NC_004757.1 hypothetical protein 2332008 1083108 NE2146 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842150.1 2331664 R 228410 CDS NP_842151.1 30250081 1083109 complement(2331984..2333312) 1 NC_004757.1 M24 family metallopeptidase 2333312 pepP 1083109 pepP Nitrosomonas europaea ATCC 19718 M24 family metallopeptidase NP_842151.1 2331984 R 228410 CDS NP_842152.1 30250082 1083110 2333465..2334145 1 NC_004757.1 ribulose-phosphate 3-epimerase 2334145 cbbE 1083110 cbbE Nitrosomonas europaea ATCC 19718 ribulose-phosphate 3-epimerase NP_842152.1 2333465 D 228410 CDS NP_842153.1 30250083 1083111 2334165..2334887 1 NC_004757.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 2334887 cbbZ 1083111 cbbZ Nitrosomonas europaea ATCC 19718 phosphoglycolate phosphatase NP_842153.1 2334165 D 228410 CDS NP_842154.1 30250084 1083112 2334991..2336478 1 NC_004757.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2336478 trpE 1083112 trpE Nitrosomonas europaea ATCC 19718 anthranilate synthase component I NP_842154.1 2334991 D 228410 CDS NP_842155.1 30250085 1083113 complement(2336578..2337003) 1 NC_004757.1 hypothetical protein 2337003 1083113 NE2151 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842155.1 2336578 R 228410 CDS NP_842156.1 30250086 1083114 complement(2337026..2337364) 1 NC_004757.1 hypothetical protein 2337364 1083114 NE2152 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842156.1 2337026 R 228410 CDS NP_842157.1 30250087 1083115 2337473..2338129 1 NC_004757.1 hypothetical protein 2338129 1083115 NE2153 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842157.1 2337473 D 228410 CDS NP_842158.1 30250088 1083116 2338233..2339414 1 NC_004757.1 hypothetical protein 2339414 1083116 NE2154 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842158.1 2338233 D 228410 CDS NP_842159.1 30250089 1083117 complement(2339500..2340351) 1 NC_004757.1 integrase catalytic subunit 2340351 1083117 NE2155 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842159.1 2339500 R 228410 CDS NP_842160.1 30250090 1083118 complement(2340405..2340728) 1 NC_004757.1 transposase IS911 2340728 1083118 NE2156 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_842160.1 2340405 R 228410 CDS NP_842161.1 30250091 1083119 complement(2340776..2342578) 1 NC_004757.1 dihydrolipoamide dehydrogenase 2342578 1083119 NE2157 Nitrosomonas europaea ATCC 19718 dihydrolipoamide dehydrogenase NP_842161.1 2340776 R 228410 CDS NP_842162.1 30250092 1083120 complement(2342559..2343827) 1 NC_004757.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 2343827 proA 1083120 proA Nitrosomonas europaea ATCC 19718 gamma-glutamyl phosphate reductase NP_842162.1 2342559 R 228410 CDS NP_842163.1 30250093 1083121 complement(2343889..2344563) 1 NC_004757.1 hypothetical protein 2344563 1083121 NE2159 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842163.1 2343889 R 228410 CDS NP_842164.1 30250094 1083122 complement(2344663..2345220) 1 NC_004757.1 hypothetical protein 2345220 1083122 NE2160 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842164.1 2344663 R 228410 CDS NP_842165.1 30250095 1083123 complement(2345214..2346086) 1 NC_004757.1 esterase/lipase/thioesterase family protein 2346086 1083123 NE2161 Nitrosomonas europaea ATCC 19718 esterase/lipase/thioesterase family protein NP_842165.1 2345214 R 228410 CDS NP_842166.1 30250096 1083124 complement(2346083..2346919) 1 NC_004757.1 esterase/lipase/thioesterase family protein 2346919 1083124 NE2162 Nitrosomonas europaea ATCC 19718 esterase/lipase/thioesterase family protein NP_842166.1 2346083 R 228410 CDS NP_842167.1 30250097 1083125 complement(2346926..2347177) 1 NC_004757.1 hypothetical protein 2347177 1083125 NE2163 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842167.1 2346926 R 228410 CDS NP_842168.1 30250098 1083126 2347387..2348577 1 NC_004757.1 tetraacyldisaccharide-1-P 4'-kinase 2348577 lpxK 1083126 lpxK Nitrosomonas europaea ATCC 19718 tetraacyldisaccharide-1-P 4'-kinase NP_842168.1 2347387 D 228410 CDS NP_842169.1 30250099 1083127 complement(2348703..2351255) 1 NC_004757.1 TonB-dependent receptor protein 2351255 1083127 NE2165 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_842169.1 2348703 R 228410 CDS NP_842170.1 30250100 1083128 complement(2351482..2354949) 1 NC_004757.1 UvrD/REP helicase 2354949 1083128 NE2166 Nitrosomonas europaea ATCC 19718 UvrD/REP helicase NP_842170.1 2351482 R 228410 CDS NP_842171.1 30250101 1083129 complement(2355232..2356377) 1 NC_004757.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 2356377 1083129 NE2167 Nitrosomonas europaea ATCC 19718 TDP-4-oxo-6-deoxy-D-glucose transaminase NP_842171.1 2355232 R 228410 CDS NP_842172.1 30250102 1083130 complement(2356374..2358623) 1 NC_004757.1 hypothetical protein 2358623 1083130 NE2168 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842172.1 2356374 R 228410 CDS NP_842173.1 30250103 1083131 complement(2358631..2359506) 1 NC_004757.1 Generic methyltransferase 2359506 1083131 NE2169 Nitrosomonas europaea ATCC 19718 Generic methyltransferase NP_842173.1 2358631 R 228410 CDS NP_842174.1 30250104 1083132 complement(2359503..2359937) 1 NC_004757.1 hypothetical protein 2359937 1083132 NE2170 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842174.1 2359503 R 228410 CDS NP_842175.1 30250105 1083133 complement(2359934..2360719) 1 NC_004757.1 formyl transferase N-terminus 2360719 1083133 NE2171 Nitrosomonas europaea ATCC 19718 formyl transferase N-terminus NP_842175.1 2359934 R 228410 CDS NP_842176.1 30250106 1083134 complement(2360723..2361361) 1 NC_004757.1 SAM-binding motif-containing protein 2361361 1083134 NE2172 Nitrosomonas europaea ATCC 19718 SAM-binding motif-containing protein NP_842176.1 2360723 R 228410 CDS NP_842177.1 30250107 1083135 complement(2361342..2362271) 1 NC_004757.1 glycosyl transferase family protein 2362271 1083135 NE2173 Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_842177.1 2361342 R 228410 CDS NP_842178.1 30250108 1083136 complement(2362394..2362726) 1 NC_004757.1 hypothetical protein 2362726 1083136 NE2174 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842178.1 2362394 R 228410 CDS NP_842179.1 30250109 1083137 complement(2362713..2362952) 1 NC_004757.1 hypothetical protein 2362952 1083137 NE2175 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842179.1 2362713 R 228410 CDS NP_842180.1 30250110 1083138 complement(2363012..2363704) 1 NC_004757.1 hypothetical protein 2363704 1083138 NE2176 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842180.1 2363012 R 228410 CDS NP_842181.1 30250111 1083139 complement(2363701..2365269) 1 NC_004757.1 hypothetical protein 2365269 1083139 NE2177 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842181.1 2363701 R 228410 CDS NP_842182.1 30250112 1083140 complement(2365414..2368143) 1 NC_004757.1 hypothetical protein 2368143 1083140 NE2178 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842182.1 2365414 R 228410 CDS NP_842183.1 30250113 1083141 2368230..2368769 1 NC_004757.1 hypothetical protein 2368769 1083141 NE2179 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842183.1 2368230 D 228410 CDS NP_842184.1 30250114 1083142 complement(2368779..2369840) 1 NC_004757.1 DNA polymerase III subunit delta' 2369840 holB 1083142 holB Nitrosomonas europaea ATCC 19718 DNA polymerase III subunit delta' NP_842184.1 2368779 R 228410 CDS NP_842185.1 30250115 1083143 complement(2369966..2370613) 1 NC_004757.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2370613 tmk 1083143 tmk Nitrosomonas europaea ATCC 19718 thymidylate kinase NP_842185.1 2369966 R 228410 CDS NP_842186.1 30250116 1083144 2370691..2371242 1 NC_004757.1 N-acetyl-anhydromuranmyl-L-alanine amidase 2371242 ampD 1083144 ampD Nitrosomonas europaea ATCC 19718 N-acetyl-anhydromuranmyl-L-alanine amidase NP_842186.1 2370691 D 228410 CDS NP_842187.1 30250117 1083145 2371400..2371804 1 NC_004757.1 hypothetical protein 2371804 1083145 NE2183 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842187.1 2371400 D 228410 CDS NP_842188.1 30250118 1083146 2371794..2372063 1 NC_004757.1 phosphocarrier HPr protein 2372063 ptsH 1083146 ptsH Nitrosomonas europaea ATCC 19718 phosphocarrier HPr protein NP_842188.1 2371794 D 228410 CDS NP_842189.1 30250119 1083147 2372060..2373787 1 NC_004757.1 PEP-utilizing protein 2373787 ptsI 1083147 ptsI Nitrosomonas europaea ATCC 19718 PEP-utilizing protein NP_842189.1 2372060 D 228410 CDS NP_842190.1 30250120 1083148 2373891..2375024 1 NC_004757.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 2375024 metX 1083148 metX Nitrosomonas europaea ATCC 19718 homoserine O-acetyltransferase NP_842190.1 2373891 D 228410 CDS NP_842191.1 30250121 1083149 2375137..2375667 1 NC_004757.1 SAM-binding motif-containing protein 2375667 metW 1083149 metW Nitrosomonas europaea ATCC 19718 SAM-binding motif-containing protein NP_842191.1 2375137 D 228410 CDS NP_842192.1 30250122 1083150 complement(2376254..2376541) 1 NC_004757.1 hypothetical protein 2376541 1083150 NE2188 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842192.1 2376254 R 228410 CDS NP_842193.1 30250123 1083151 complement(2376658..2377629) 1 NC_004757.1 Leon G., Roy P.H., J. Bact. 185(6):2036-2041(2003); integron integrase 2377629 intINeu 1083151 intINeu Nitrosomonas europaea ATCC 19718 integron integrase NP_842193.1 2376658 R 228410 CDS NP_842194.1 30250124 1083152 2377770..2378141 1 NC_004757.1 Leon G., Roy P.H., J. Bact. 185(6):2036-2041(2003); qacE-like protein; integron orf 2378141 attINeu 1083152 attINeu Nitrosomonas europaea ATCC 19718 qacE-like protein; integron orf NP_842194.1 2377770 D 228410 CDS NP_842195.1 30250125 1083153 complement(2378248..2379561) 1 NC_004757.1 Leon G., Roy P.H., J. Bact. 185(6):2036-2041(2003); integron/retron-type RNA-directed DNA polymerase 2379561 1083153 NE2190 Nitrosomonas europaea ATCC 19718 integron/retron-type RNA-directed DNA polymerase NP_842195.1 2378248 R 228410 CDS NP_842196.1 30250126 1083154 complement(2380302..2381669) 1 NC_004757.1 transport transmembrane protein 2381669 ampG 1083154 ampG Nitrosomonas europaea ATCC 19718 transport transmembrane protein NP_842196.1 2380302 R 228410 CDS NP_842197.1 30250127 1083155 complement(2381666..2382439) 1 NC_004757.1 exodeoxyribonuclease III:exodeoxyribonuclease III xth 2382439 xthA2 1083155 xthA2 Nitrosomonas europaea ATCC 19718 exodeoxyribonuclease III:exodeoxyribonuclease III xth NP_842197.1 2381666 R 228410 CDS NP_842198.1 30250128 1083156 complement(2382451..2382801) 1 NC_004757.1 hypothetical protein 2382801 1083156 NE2193 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842198.1 2382451 R 228410 CDS NP_842199.1 30250129 1083157 complement(2382990..2383526) 1 NC_004757.1 hypothetical protein 2383526 1083157 NE2194 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842199.1 2382990 R 228410 CDS NP_842200.1 30250130 1083158 2383768..2385135 1 NC_004757.1 modulator of DNA gyrase 2385135 pmbA 1083158 pmbA Nitrosomonas europaea ATCC 19718 modulator of DNA gyrase NP_842200.1 2383768 D 228410 CDS NP_842201.1 30250131 1083159 2385211..2386131 1 NC_004757.1 hypothetical protein 2386131 1083159 NE2196 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842201.1 2385211 D 228410 CDS NP_842202.1 30250132 1083160 complement(2386220..2388625) 1 NC_004757.1 S1 RNA-binding domain-containing protein 2388625 tex 1083160 tex Nitrosomonas europaea ATCC 19718 S1 RNA-binding domain-containing protein NP_842202.1 2386220 R 228410 CDS NP_842203.1 30250133 1083161 complement(2388972..2389286) 1 NC_004757.1 hypothetical protein 2389286 1083161 NE2198 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842203.1 2388972 R 228410 CDS NP_842204.1 30250134 1083162 complement(2389372..2390649) 1 NC_004757.1 flavin-containing monooxygenase (FMO) 2390649 1083162 NE2199 Nitrosomonas europaea ATCC 19718 flavin-containing monooxygenase (FMO) NP_842204.1 2389372 R 228410 CDS NP_842205.1 30250135 1083163 2390793..2391161 1 NC_004757.1 transposase 2391161 1083163 NE2200 Nitrosomonas europaea ATCC 19718 transposase NP_842205.1 2390793 D 228410 CDS NP_842206.1 30250136 1083164 2390966..2391541 1 NC_004757.1 IS4 family transposase 2391541 1083164 NE2201 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_842206.1 2390966 D 228410 CDS NP_842207.1 30250137 1083168 2393813..2394607 1 NC_004757.1 short-chain dehydrogenase/reductase 2394607 1083168 NE2205 Nitrosomonas europaea ATCC 19718 short-chain dehydrogenase/reductase NP_842207.1 2393813 D 228410 CDS NP_842208.1 30250138 1083169 complement(2394658..2396550) 1 NC_004757.1 PpiC-type peptidyl-prolyl cis-trans isomerase 2396550 ppiD 1083169 ppiD Nitrosomonas europaea ATCC 19718 PpiC-type peptidyl-prolyl cis-trans isomerase NP_842208.1 2394658 R 228410 CDS NP_842209.1 30250139 1083172 complement(2396895..2397167) 1 NC_004757.1 histone-like DNA-binding protein 2397167 hupB 1083172 hupB Nitrosomonas europaea ATCC 19718 histone-like DNA-binding protein NP_842209.1 2396895 R 228410 CDS NP_842210.1 30250140 1083173 complement(2397380..2398369) 1 NC_004757.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2398369 gpsA 1083173 gpsA Nitrosomonas europaea ATCC 19718 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase NP_842210.1 2397380 R 228410 CDS NP_842211.1 30250141 1083174 complement(2398366..2398854) 1 NC_004757.1 hypothetical protein 2398854 1083174 NE2209 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842211.1 2398366 R 228410 CDS NP_842212.1 30250142 1083175 complement(2398858..2399343) 1 NC_004757.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 2399343 secB 1083175 secB Nitrosomonas europaea ATCC 19718 preprotein translocase subunit SecB NP_842212.1 2398858 R 228410 CDS NP_842213.1 30250143 1083176 complement(2399418..2399675) 1 NC_004757.1 glutaredoxin 2399675 grxC 1083176 grxC Nitrosomonas europaea ATCC 19718 glutaredoxin NP_842213.1 2399418 R 228410 CDS NP_842214.1 30250144 1083177 complement(2399707..2400129) 1 NC_004757.1 transmembrane protein 2400129 1083177 NE2212 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_842214.1 2399707 R 228410 CDS NP_842215.1 30250145 1083178 2400268..2401497 1 NC_004757.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 2401497 argJ 1083178 argJ Nitrosomonas europaea ATCC 19718 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase NP_842215.1 2400268 D 228410 CDS NP_842216.1 30250146 1083179 2401504..2402397 1 NC_004757.1 ATPase AAA 2402397 1083179 NE2214 Nitrosomonas europaea ATCC 19718 ATPase AAA NP_842216.1 2401504 D 228410 CDS NP_842217.1 30250147 1083180 2402399..2403334 1 NC_004757.1 hypothetical protein 2403334 1083180 NE2215 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842217.1 2402399 D 228410 CDS NP_842218.1 30250148 1083181 complement(2403363..2404556) 1 NC_004757.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2404556 1083181 NE2216 Nitrosomonas europaea ATCC 19718 FAD-dependent pyridine nucleotide-disulfide oxidoreductase NP_842218.1 2403363 R 228410 CDS NP_842219.1 30250149 1083182 2404725..2406089 1 NC_004757.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 2406089 mpl 1083182 mpl Nitrosomonas europaea ATCC 19718 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase NP_842219.1 2404725 D 228410 CDS NP_842220.1 30250150 1083183 complement(2406315..2407181) 1 NC_004757.1 hypothetical protein 2407181 1083183 NE2218 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842220.1 2406315 R 228410 CDS NP_842221.1 30250151 1083184 2407544..2408254 1 NC_004757.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2408254 aat 1083184 aat Nitrosomonas europaea ATCC 19718 leucyl/phenylalanyl-tRNA--protein transferase NP_842221.1 2407544 D 228410 CDS NP_842222.2 161511225 1083185 2408212..2408967 1 NC_004757.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2408967 1083185 NE2220 Nitrosomonas europaea ATCC 19718 arginyl-tRNA-protein transferase NP_842222.2 2408212 D 228410 CDS NP_842223.1 30250153 1083186 2408970..2409998 1 NC_004757.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2409998 pyrD 1083186 pyrD Nitrosomonas europaea ATCC 19718 dihydroorotate dehydrogenase 2 NP_842223.1 2408970 D 228410 CDS NP_842224.1 30250154 1083187 2409988..2410644 1 NC_004757.1 3Fe-4S ferredoxin 2410644 1083187 NE2222 Nitrosomonas europaea ATCC 19718 3Fe-4S ferredoxin NP_842224.1 2409988 D 228410 CDS NP_842225.1 30250155 1083188 2410645..2411316 1 NC_004757.1 HhH-GPD:Iron-sulfur cluster loop (FCL) 2411316 nth 1083188 nth Nitrosomonas europaea ATCC 19718 HhH-GPD:Iron-sulfur cluster loop (FCL) NP_842225.1 2410645 D 228410 CDS NP_842226.1 30250156 1083189 2411313..2411708 1 NC_004757.1 hypothetical protein 2411708 1083189 NE2224 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842226.1 2411313 D 228410 CDS NP_842227.1 30250157 1083190 2411698..2412135 1 NC_004757.1 hypothetical protein 2412135 1083190 NE2225 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842227.1 2411698 D 228410 CDS NP_842228.1 30250158 1083191 complement(2412161..2413066) 1 NC_004757.1 SLT domain-containing protein 2413066 1083191 NE2226 Nitrosomonas europaea ATCC 19718 SLT domain-containing protein NP_842228.1 2412161 R 228410 CDS NP_842229.1 30250159 1083192 complement(2413308..2414870) 1 NC_004757.1 hypothetical protein 2414870 1083192 NE2227 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842229.1 2413308 R 228410 CDS NP_842230.1 30250160 1083193 complement(2415225..2416268) 1 NC_004757.1 integrase catalytic subunit 2416268 1083193 NE2228 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842230.1 2415225 R 228410 CDS NP_842231.1 30250161 1083194 2416689..2417594 1 NC_004757.1 similar to (AF324335) long-chain N-acyl amino acid synthase [uncultured proteobacterium SFB/CJ-2001], evalue=6.00e-55, 48% identity; long-chain N-acyl amino acid synthase 2417594 1083194 NE2229 Nitrosomonas europaea ATCC 19718 long-chain N-acyl amino acid synthase NP_842231.1 2416689 D 228410 CDS NP_842232.1 30250162 1083195 2417795..2418211 1 NC_004757.1 hypothetical protein 2418211 1083195 NE2230 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842232.1 2417795 D 228410 CDS NP_842233.1 30250163 1083196 2418225..2418638 1 NC_004757.1 hypothetical protein 2418638 1083196 NE2231 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842233.1 2418225 D 228410 CDS NP_842234.1 30250164 1083197 complement(2418813..2419856) 1 NC_004757.1 integrase catalytic subunit 2419856 1083197 NE2232 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842234.1 2418813 R 228410 CDS NP_842235.1 30250165 1083198 2420648..2421631 1 NC_004757.1 Fatty acid desaturase, type 2 2421631 1083198 NE2233 Nitrosomonas europaea ATCC 19718 Fatty acid desaturase, type 2 NP_842235.1 2420648 D 228410 CDS NP_842236.1 30250166 1083199 complement(2421663..2422778) 1 NC_004757.1 polyketide synthase 2422778 hetM 1083199 hetM Nitrosomonas europaea ATCC 19718 polyketide synthase NP_842236.1 2421663 R 228410 CDS NP_842237.1 30250167 1083200 complement(2422775..2424622) 1 NC_004757.1 AMP-dependent synthetase and ligase 2424622 1083200 NE2235 Nitrosomonas europaea ATCC 19718 AMP-dependent synthetase and ligase NP_842237.1 2422775 R 228410 CDS NP_842238.1 30250168 1083201 complement(2424692..2425762) 1 NC_004757.1 hypothetical protein 2425762 1083201 NE2236 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842238.1 2424692 R 228410 CDS NP_842239.1 30250169 1083202 complement(2425795..2427483) 1 NC_004757.1 FAD linked oxidase domain-containing protein 2427483 1083202 NE2237 Nitrosomonas europaea ATCC 19718 FAD linked oxidase domain-containing protein NP_842239.1 2425795 R 228410 CDS NP_842240.1 30250170 1083203 complement(2427598..2428041) 1 NC_004757.1 transposase IS200 2428041 1083203 NE2238 Nitrosomonas europaea ATCC 19718 transposase IS200 NP_842240.1 2427598 R 228410 CDS NP_842241.1 30250171 1083204 complement(2428310..2429119) 1 NC_004757.1 hypothetical protein 2429119 1083204 NE2239 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842241.1 2428310 R 228410 CDS NP_842242.1 30250172 1083205 2429390..2430637 1 NC_004757.1 hypothetical protein 2430637 1083205 NE2240 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842242.1 2429390 D 228410 CDS NP_842243.1 30250173 1083206 2430887..2431504 1 NC_004757.1 hypothetical protein 2431504 1083206 NE2241 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842243.1 2430887 D 228410 CDS NP_842244.1 30250174 1083207 2431573..2432784 1 NC_004757.1 hypothetical protein 2432784 1083207 NE2242 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842244.1 2431573 D 228410 CDS NP_842245.1 30250175 1083208 complement(2432821..2434251) 1 NC_004757.1 hypothetical protein 2434251 1083208 NE2243 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842245.1 2432821 R 228410 CDS NP_842246.1 30250176 1083209 complement(2434332..2435027) 1 NC_004757.1 ABC transporter ATPase 2435027 1083209 NE2244 Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_842246.1 2434332 R 228410 CDS NP_842247.1 30250177 1083211 2435095..2435868 1 NC_004757.1 hypothetical protein 2435868 1083211 NE2245 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842247.1 2435095 D 228410 CDS NP_842248.1 30250178 1083212 2436017..2436742 1 NC_004757.1 hypothetical protein 2436742 1083212 NE2246 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842248.1 2436017 D 228410 CDS NP_842249.1 30250179 1083213 2436978..2438477 1 NC_004757.1 hypothetical protein 2438477 1083213 NE2247 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842249.1 2436978 D 228410 CDS NP_842250.1 30250180 1083214 complement(2438587..2439072) 1 NC_004757.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 2439072 1083214 NE2248 Nitrosomonas europaea ATCC 19718 nucleotide-binding protein NP_842250.1 2438587 R 228410 CDS NP_842251.1 30250181 1083215 2439311..2440420 1 NC_004757.1 UDP-N-acetylglucosamine 2-epimerase 2440420 wbpI 1083215 wbpI Nitrosomonas europaea ATCC 19718 UDP-N-acetylglucosamine 2-epimerase NP_842251.1 2439311 D 228410 CDS NP_842252.1 30250182 1083216 2440428..2441936 1 NC_004757.1 mannose-1-phosphate guanylyltransferase 2441936 1083216 NE2250 Nitrosomonas europaea ATCC 19718 mannose-1-phosphate guanylyltransferase NP_842252.1 2440428 D 228410 CDS NP_842253.1 30250183 1083217 2442042..2442380 1 NC_004757.1 Type I antifreeze protein 2442380 1083217 NE2251 Nitrosomonas europaea ATCC 19718 Type I antifreeze protein NP_842253.1 2442042 D 228410 CDS NP_842254.1 30250184 1083218 2442464..2444245 1 NC_004757.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2444245 aspS 1083218 aspS Nitrosomonas europaea ATCC 19718 aspartyl-tRNA synthetase NP_842254.1 2442464 D 228410 CDS NP_842255.1 30250185 1083219 2444258..2444716 1 NC_004757.1 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 2444716 ntpA 1083219 ntpA Nitrosomonas europaea ATCC 19718 dATP pyrophosphohydrolase NP_842255.1 2444258 D 228410 CDS NP_842256.1 30250186 1083221 2445013..2445618 1 NC_004757.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 2445618 gmk 1083221 gmk Nitrosomonas europaea ATCC 19718 guanylate kinase NP_842256.1 2445013 D 228410 CDS NP_842257.1 30250187 1083222 2445664..2445867 1 NC_004757.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2445867 rpoZ 1083222 rpoZ Nitrosomonas europaea ATCC 19718 DNA-directed RNA polymerase subunit omega NP_842257.1 2445664 D 228410 CDS NP_842258.1 30250188 1083223 complement(2446050..2446463) 1 NC_004757.1 N-acetyltransferase GCN5 2446463 1083223 NE2256 Nitrosomonas europaea ATCC 19718 N-acetyltransferase GCN5 NP_842258.1 2446050 R 228410 CDS NP_842259.1 30250189 1083224 complement(2446486..2447139) 1 NC_004757.1 SAM-binding motif-containing protein 2447139 1083224 NE2257 Nitrosomonas europaea ATCC 19718 SAM-binding motif-containing protein NP_842259.1 2446486 R 228410 CDS NP_842260.1 30250190 1083225 complement(2447196..2447585) 1 NC_004757.1 hypothetical protein 2447585 1083225 NE2258 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842260.1 2447196 R 228410 CDS NP_842261.1 30250191 1083226 complement(2447626..2448330) 1 NC_004757.1 ThiJ/PfpI family protein 2448330 1083226 NE2259 Nitrosomonas europaea ATCC 19718 ThiJ/PfpI family protein NP_842261.1 2447626 R 228410 CDS NP_842262.1 30250192 1083227 2448814..2449335 1 NC_004757.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 2449335 hslV 1083227 hslV Nitrosomonas europaea ATCC 19718 ATP-dependent protease peptidase subunit NP_842262.1 2448814 D 228410 CDS NP_842263.1 30250193 1083228 2449369..2450700 1 NC_004757.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 2450700 hslU 1083228 hslU Nitrosomonas europaea ATCC 19718 ATP-dependent protease ATP-binding subunit HslU NP_842263.1 2449369 D 228410 CDS NP_842264.1 30250194 1083229 2450711..2451889 1 NC_004757.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 2451889 bktB 1083229 bktB Nitrosomonas europaea ATCC 19718 beta-ketothiolase NP_842264.1 2450711 D 228410 CDS NP_842265.1 30250195 1083230 2451919..2453553 1 NC_004757.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 2453553 pgi 1083230 pgi Nitrosomonas europaea ATCC 19718 glucose-6-phosphate isomerase NP_842265.1 2451919 D 228410 CDS NP_842266.1 30250196 1083231 2453578..2455065 1 NC_004757.1 group 1 glycosyl transferase 2455065 glgA1 1083231 glgA1 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_842266.1 2453578 D 228410 CDS NP_842267.1 30250197 1083232 2455277..2456044 1 NC_004757.1 hypothetical protein 2456044 1083232 NE2265 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842267.1 2455277 D 228410 CDS NP_842268.1 30250198 1083233 complement(2456125..2457267) 1 NC_004757.1 group 1 glycosyl transferase 2457267 1083233 NE2266 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_842268.1 2456125 R 228410 CDS NP_842269.1 30250199 1083234 complement(2457269..2458423) 1 NC_004757.1 group 1 glycosyl transferase 2458423 1083234 NE2267 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_842269.1 2457269 R 228410 CDS NP_842270.1 30250200 1083235 complement(2458390..2459382) 1 NC_004757.1 hypothetical protein 2459382 1083235 NE2268 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842270.1 2458390 R 228410 CDS NP_842271.1 30250201 1083236 complement(2459440..2460540) 1 NC_004757.1 group 1 glycosyl transferase 2460540 1083236 NE2269 Nitrosomonas europaea ATCC 19718 group 1 glycosyl transferase NP_842271.1 2459440 R 228410 CDS NP_842272.1 30250202 1083237 complement(2460540..2461574) 1 NC_004757.1 hypothetical protein 2461574 1083237 NE2270 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842272.1 2460540 R 228410 CDS NP_842273.1 30250203 1083238 complement(2461634..2462779) 1 NC_004757.1 poly-gamma-glutamate synthesis protein [UI:99417512] 2462779 pgsA 1083238 pgsA Nitrosomonas europaea ATCC 19718 poly-gamma-glutamate synthesis protein [UI:99417512] NP_842273.1 2461634 R 228410 CDS NP_842274.1 30250204 1083240 2463295..2463663 1 NC_004757.1 transposase 2463663 1083240 NE2273 Nitrosomonas europaea ATCC 19718 transposase NP_842274.1 2463295 D 228410 CDS NP_842275.1 30250205 1083241 2463468..2464043 1 NC_004757.1 IS4 family transposase 2464043 1083241 NE2274 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_842275.1 2463468 D 228410 CDS NP_842276.1 30250206 1083243 complement(2464956..2466230) 1 NC_004757.1 UDP-glucose/GDP-mannose dehydrogenase family protein 2466230 tviB 1083243 tviB Nitrosomonas europaea ATCC 19718 UDP-glucose/GDP-mannose dehydrogenase family protein NP_842276.1 2464956 R 228410 CDS NP_842277.1 30250207 1083244 complement(2466239..2467246) 1 NC_004757.1 NAD-dependent epimerase/dehydratase family protein 2467246 1083244 NE2277 Nitrosomonas europaea ATCC 19718 NAD-dependent epimerase/dehydratase family protein NP_842277.1 2466239 R 228410 CDS NP_842278.1 30250208 1083245 2467684..2468073 1 NC_004757.1 low molecular weight phosphotyrosine protein phosphatase 2468073 epsP 1083245 epsP Nitrosomonas europaea ATCC 19718 low molecular weight phosphotyrosine protein phosphatase NP_842278.1 2467684 D 228410 CDS NP_842279.1 30250209 1083246 2468173..2469390 1 NC_004757.1 polysaccharide export protein 2469390 yccZ 1083246 yccZ Nitrosomonas europaea ATCC 19718 polysaccharide export protein NP_842279.1 2468173 D 228410 CDS NP_842280.1 30250210 1083247 2469537..2471792 1 NC_004757.1 chain length determinant protein 2471792 epsB 1083247 epsB Nitrosomonas europaea ATCC 19718 chain length determinant protein NP_842280.1 2469537 D 228410 CDS NP_842281.1 30250211 1083248 2471789..2473411 1 NC_004757.1 glycosyl transferase family protein 2473411 rfe 1083248 rfe Nitrosomonas europaea ATCC 19718 glycosyl transferase family protein NP_842281.1 2471789 D 228410 CDS NP_842282.1 30250212 1083249 complement(2473430..2473666) 1 NC_004757.1 hypothetical protein 2473666 1083249 NE2282 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842282.1 2473430 R 228410 CDS NP_842283.1 30250213 1083250 complement(2473700..2474833) 1 NC_004757.1 hypothetical protein 2474833 1083250 NE2283 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842283.1 2473700 R 228410 CDS NP_842284.1 30250214 1083251 complement(2474902..2478429) 1 NC_004757.1 chromosome segregation ATPase 2478429 1083251 NE2284 Nitrosomonas europaea ATCC 19718 chromosome segregation ATPase NP_842284.1 2474902 R 228410 CDS NP_842285.1 30250215 1083252 2478517..2478936 1 NC_004757.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2478936 1083252 NE2285 Nitrosomonas europaea ATCC 19718 7-cyano-7-deazaguanine reductase NP_842285.1 2478517 D 228410 CDS NP_842286.1 30250216 1083253 2478982..2480370 1 NC_004757.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2480370 fumC 1083253 fumC Nitrosomonas europaea ATCC 19718 fumarate hydratase NP_842286.1 2478982 D 228410 CDS NP_842287.1 30250217 1083257 complement(2483323..2485710) 1 NC_004757.1 type II secretion system protein E 2485710 1083257 NE2290 Nitrosomonas europaea ATCC 19718 type II secretion system protein E NP_842287.1 2483323 R 228410 CDS NP_842288.1 30250218 1083258 complement(2485723..2486487) 1 NC_004757.1 cAMP phosphodiesterase 2486487 1083258 NE2291 Nitrosomonas europaea ATCC 19718 cAMP phosphodiesterase NP_842288.1 2485723 R 228410 CDS NP_842289.1 30250219 1083259 complement(2486574..2486999) 1 NC_004757.1 universal stress protein 2486999 yxiE 1083259 yxiE Nitrosomonas europaea ATCC 19718 universal stress protein NP_842289.1 2486574 R 228410 CDS NP_842290.1 30250220 1083260 complement(2487096..2487815) 1 NC_004757.1 hypothetical protein 2487815 1083260 NE2293 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842290.1 2487096 R 228410 CDS NP_842291.1 30250221 1083261 complement(2487821..2488975) 1 NC_004757.1 patatin 2488975 1083261 NE2294 Nitrosomonas europaea ATCC 19718 patatin NP_842291.1 2487821 R 228410 CDS NP_842292.1 30250222 1083262 2489265..2490272 1 NC_004757.1 prolyl aminopeptidase 2490272 1083262 NE2295 Nitrosomonas europaea ATCC 19718 prolyl aminopeptidase NP_842292.1 2489265 D 228410 CDS NP_842293.1 30250223 1083263 complement(2490310..2490996) 1 NC_004757.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2490996 bioD 1083263 bioD Nitrosomonas europaea ATCC 19718 dithiobiotin synthetase NP_842293.1 2490310 R 228410 CDS NP_842294.1 30250224 1083264 complement(2490996..2491892) 1 NC_004757.1 SAM-binding motif-containing protein 2491892 bioC 1083264 bioC Nitrosomonas europaea ATCC 19718 SAM-binding motif-containing protein NP_842294.1 2490996 R 228410 CDS NP_842295.1 30250225 1083265 complement(2491882..2492661) 1 NC_004757.1 biotin biosynthesis protein BioH 2492661 bioH 1083265 bioH Nitrosomonas europaea ATCC 19718 biotin biosynthesis protein BioH NP_842295.1 2491882 R 228410 CDS NP_842296.1 30250226 1083266 complement(2492642..2493805) 1 NC_004757.1 class-I aminotransferase 2493805 bioF 1083266 bioF Nitrosomonas europaea ATCC 19718 class-I aminotransferase NP_842296.1 2492642 R 228410 CDS NP_842297.1 30250227 1083267 complement(2493826..2494845) 1 NC_004757.1 biotin synthase 2494845 bioB 1083267 bioB Nitrosomonas europaea ATCC 19718 biotin synthase NP_842297.1 2493826 R 228410 CDS NP_842298.1 30250228 1083268 2494910..2495686 1 NC_004757.1 hypothetical protein 2495686 1083268 NE2301 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842298.1 2494910 D 228410 CDS NP_842299.1 30250229 1083269 2495699..2496163 1 NC_004757.1 rRNA methyltransferase 2496163 1083269 NE2302 Nitrosomonas europaea ATCC 19718 rRNA methyltransferase NP_842299.1 2495699 D 228410 CDS NP_842300.1 30250230 1083270 2496410..2497939 1 NC_004757.1 NAD(FAD)-dependent dehydrogenase 2497939 1083270 NE2303 Nitrosomonas europaea ATCC 19718 NAD(FAD)-dependent dehydrogenase NP_842300.1 2496410 D 228410 CDS NP_842301.1 30250231 1083271 2498019..2498651 1 NC_004757.1 isochorismatase hydrolase family protein 2498651 1083271 NE2304 Nitrosomonas europaea ATCC 19718 isochorismatase hydrolase family protein NP_842301.1 2498019 D 228410 CDS NP_842302.1 30250232 1083272 2498687..2499235 1 NC_004757.1 hypothetical protein 2499235 1083272 NE2305 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842302.1 2498687 D 228410 CDS NP_842303.1 30250233 1083273 complement(2499322..2502060) 1 NC_004757.1 hypothetical protein 2502060 1083273 NE2306 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842303.1 2499322 R 228410 CDS NP_842304.1 30250234 1083274 complement(2502057..2503103) 1 NC_004757.1 hypothetical protein 2503103 rhuM 1083274 rhuM Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842304.1 2502057 R 228410 CDS NP_842305.1 30250235 1083275 complement(2503100..2504140) 1 NC_004757.1 hypothetical protein 2504140 1083275 NE2308 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842305.1 2503100 R 228410 CDS NP_842306.1 30250236 1083276 complement(2504137..2505840) 1 NC_004757.1 adenine specific DNA methylase Mod 2505840 1083276 NE2309 Nitrosomonas europaea ATCC 19718 adenine specific DNA methylase Mod NP_842306.1 2504137 R 228410 CDS NP_842307.1 30250237 1083277 complement(2505842..2508925) 1 NC_004757.1 ABC transporter 2508925 1083277 NE2310 Nitrosomonas europaea ATCC 19718 ABC transporter NP_842307.1 2505842 R 228410 CDS NP_842308.1 30250238 1083278 complement(2508925..2511822) 1 NC_004757.1 Snf2/Rad54 family helicase 2511822 1083278 NE2311 Nitrosomonas europaea ATCC 19718 Snf2/Rad54 family helicase NP_842308.1 2508925 R 228410 CDS NP_842309.1 30250239 1083279 complement(2511923..2514079) 1 NC_004757.1 pilQ; fimbrial type-4 assembly signal peptide protein 2514079 pilQ 1083279 pilQ Nitrosomonas europaea ATCC 19718 pilQ; fimbrial type-4 assembly signal peptide protein NP_842309.1 2511923 R 228410 CDS NP_842310.1 30250240 1083280 complement(2514076..2514606) 1 NC_004757.1 type 4 fimbrial biogenesis protein PilP 2514606 pilP 1083280 pilP Nitrosomonas europaea ATCC 19718 type 4 fimbrial biogenesis protein PilP NP_842310.1 2514076 R 228410 CDS NP_842311.1 30250241 1083281 complement(2514603..2515253) 1 NC_004757.1 similar to (NC_003295) PROBABLE FIMBRIAL TYPE-4 ASSEMBLY MEMBRANE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] evalue=4.00e-37, 39% identity; fimbrial type-4 assembly membrane transmembrane protein 2515253 pilO 1083281 pilO Nitrosomonas europaea ATCC 19718 fimbrial type-4 assembly membrane transmembrane protein NP_842311.1 2514603 R 228410 CDS NP_842312.1 30250242 1083282 complement(2515250..2515861) 1 NC_004757.1 type 4 fimbrial biogenesis protein PilN 2515861 pilN 1083282 pilN Nitrosomonas europaea ATCC 19718 type 4 fimbrial biogenesis protein PilN NP_842312.1 2515250 R 228410 CDS NP_842313.1 30250243 1083283 complement(2515858..2516991) 1 NC_004757.1 type 4 fimbrial biogenesis protein PilM 2516991 pilM 1083283 pilM Nitrosomonas europaea ATCC 19718 type 4 fimbrial biogenesis protein PilM NP_842313.1 2515858 R 228410 CDS NP_842314.1 30250244 1083284 2517172..2519484 1 NC_004757.1 penicillin-binding 1 (peptidoglycan synthetase) transmembrane protein 2519484 mrcA 1083284 mrcA Nitrosomonas europaea ATCC 19718 penicillin-binding 1 (peptidoglycan synthetase) transmembrane protein NP_842314.1 2517172 D 228410 CDS NP_842315.1 30250245 1083285 complement(2519624..2520034) 1 NC_004757.1 hypothetical protein 2520034 1083285 NE2318 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842315.1 2519624 R 228410 CDS NP_842316.1 30250246 1083286 complement(2520078..2521550) 1 NC_004757.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 2521550 lpdA3 1083286 lpdA3 Nitrosomonas europaea ATCC 19718 dihydrolipoamide dehydrogenase NP_842316.1 2520078 R 228410 CDS NP_842317.1 30250247 1083287 complement(2521592..2522638) 1 NC_004757.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 2522638 1083287 NE2320 Nitrosomonas europaea ATCC 19718 beta-hexosaminidase NP_842317.1 2521592 R 228410 CDS NP_842318.1 30250248 1083288 complement(2522641..2523018) 1 NC_004757.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2523018 acpS 1083288 acpS Nitrosomonas europaea ATCC 19718 4'-phosphopantetheinyl transferase NP_842318.1 2522641 R 228410 CDS NP_842319.1 30250249 1083289 complement(2523015..2523740) 1 NC_004757.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2523740 pdxJ 1083289 pdxJ Nitrosomonas europaea ATCC 19718 pyridoxine 5'-phosphate synthase NP_842319.1 2523015 R 228410 CDS NP_842320.1 30250250 1083290 complement(2523795..2524685) 1 NC_004757.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2524685 era 1083290 era Nitrosomonas europaea ATCC 19718 GTP-binding protein Era NP_842320.1 2523795 R 228410 CDS NP_842321.1 30250251 1083291 complement(2524771..2525508) 1 NC_004757.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 2525508 rnc 1083291 rnc Nitrosomonas europaea ATCC 19718 ribonuclease III NP_842321.1 2524771 R 228410 CDS NP_842322.1 30250252 1083292 complement(2525505..2525885) 1 NC_004757.1 transmembrane protein 2525885 1083292 NE2325 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_842322.1 2525505 R 228410 CDS NP_842323.1 30250253 1083293 complement(2525920..2526723) 1 NC_004757.1 leader peptidase 2526723 lepB 1083293 lepB Nitrosomonas europaea ATCC 19718 leader peptidase NP_842323.1 2525920 R 228410 CDS NP_842324.1 30250254 1083294 complement(2526792..2528588) 1 NC_004757.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2528588 lepA 1083294 lepA Nitrosomonas europaea ATCC 19718 GTP-binding protein LepA NP_842324.1 2526792 R 228410 CDS NP_842325.1 30250255 1083295 complement(2528874..2529131) 1 NC_004757.1 thioredoxin 2529131 1083295 NE2328 Nitrosomonas europaea ATCC 19718 thioredoxin NP_842325.1 2528874 R 228410 CDS NP_842326.1 30250256 1083296 complement(2529149..2530639) 1 NC_004757.1 serine protease MucD 2530639 mucD 1083296 mucD Nitrosomonas europaea ATCC 19718 serine protease MucD NP_842326.1 2529149 R 228410 CDS NP_842327.1 30250257 1083297 complement(2530694..2531299) 1 NC_004757.1 hypothetical protein 2531299 1083297 NE2330 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842327.1 2530694 R 228410 CDS NP_842328.1 30250258 1083298 complement(2531293..2531895) 1 NC_004757.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 2531895 rpoE1 1083298 rpoE1 Nitrosomonas europaea ATCC 19718 RNA polymerase sigma factor RpoE NP_842328.1 2531293 R 228410 CDS NP_842329.1 30250259 1083299 complement(2532126..2532989) 1 NC_004757.1 hypothetical protein 2532989 1083299 NE2332 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842329.1 2532126 R 228410 CDS NP_842330.1 30250260 1083300 complement(2533046..2533540) 1 NC_004757.1 hypothetical protein 2533540 1083300 NE2333 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842330.1 2533046 R 228410 CDS NP_842331.1 30250261 1083301 complement(2533500..2534510) 1 NC_004757.1 PhoH-like protein 2534510 1083301 NE2334 Nitrosomonas europaea ATCC 19718 PhoH-like protein NP_842331.1 2533500 R 228410 CDS NP_842332.1 30250262 1083302 complement(2534571..2535902) 1 NC_004757.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2535902 1083302 NE2335 Nitrosomonas europaea ATCC 19718 (dimethylallyl)adenosine tRNA methylthiotransferase NP_842332.1 2534571 R 228410 CDS NP_842333.1 30250263 1083303 complement(2536078..2536779) 1 NC_004757.1 tetraheme c-cytochrome 2536779 cycX1 1083303 cycX1 Nitrosomonas europaea ATCC 19718 tetraheme c-cytochrome NP_842333.1 2536078 R 228410 CDS NP_842334.1 30250264 1083304 complement(2536782..2537489) 1 NC_004757.1 similar to Cytochrome c-554 precursor (C554) (Hydroxylamine oxidoreductase-linked cytochrome) pir||A59036 cytochrome c554, tetraheme, precursor - Nitrosomonas europaea; cytochrome c-554 2537489 cycA1 1083304 cycA1 Nitrosomonas europaea ATCC 19718 cytochrome c-554 NP_842334.1 2536782 R 228410 CDS NP_842335.1 30250265 1083305 complement(2537545..2538654) 1 NC_004757.1 hypothetical protein 2538654 1083305 NE2338 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842335.1 2537545 R 228410 CDS NP_842336.1 30250266 1083306 complement(2538651..2540363) 1 NC_004757.1 similar to (AB030386) hydroxylamine oxidoreductase [Nitrosomonas sp. ENI-11], evalue=0.00e+00, 100% identity; hydroxylamine oxidoreductase 2540363 hao3 1083306 hao3 Nitrosomonas europaea ATCC 19718 hydroxylamine oxidoreductase NP_842336.1 2538651 R 228410 CDS NP_842337.1 30250267 1083307 complement(2540394..2540657) 1 NC_004757.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 2540657 rpsT 1083307 rpsT Nitrosomonas europaea ATCC 19718 30S ribosomal protein S20 NP_842337.1 2540394 R 228410 CDS NP_842338.1 30250268 1083308 2540943..2542910 1 NC_004757.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2542910 1083308 NE2341 Nitrosomonas europaea ATCC 19718 acetyl-CoA synthetase NP_842338.1 2540943 D 228410 CDS NP_842339.1 30250269 1083309 2542907..2543908 1 NC_004757.1 metallo-beta-lactamase superfamily protein 2543908 1083309 NE2342 Nitrosomonas europaea ATCC 19718 metallo-beta-lactamase superfamily protein NP_842339.1 2542907 D 228410 CDS NP_842340.1 30250270 1083310 complement(2544017..2545312) 1 NC_004757.1 hypothetical protein 2545312 1083310 NE2343 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842340.1 2544017 R 228410 CDS NP_842341.1 30250271 1083311 complement(2545343..2546461) 1 NC_004757.1 unsaturated glucuronyl hydrolase 2546461 1083311 NE2344 Nitrosomonas europaea ATCC 19718 unsaturated glucuronyl hydrolase NP_842341.1 2545343 R 228410 CDS NP_842342.1 30250272 1083312 complement(2546469..2548019) 1 NC_004757.1 hypothetical protein 2548019 1083312 NE2345 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842342.1 2546469 R 228410 CDS NP_842343.1 30250273 1083313 2548076..2548867 1 NC_004757.1 hydrolase 2548867 1083313 NE2346 Nitrosomonas europaea ATCC 19718 hydrolase NP_842343.1 2548076 D 228410 CDS NP_842344.1 30250274 1083314 complement(2548891..2550093) 1 NC_004757.1 general substrate transporters 2550093 1083314 NE2347 Nitrosomonas europaea ATCC 19718 general substrate transporters NP_842344.1 2548891 R 228410 CDS NP_842345.1 30250275 1083315 complement(2550138..2551337) 1 NC_004757.1 Acyl-CoA dehydrogenase 2551337 fadE1 1083315 fadE1 Nitrosomonas europaea ATCC 19718 Acyl-CoA dehydrogenase NP_842345.1 2550138 R 228410 CDS NP_842346.1 30250276 1083316 complement(2551337..2553019) 1 NC_004757.1 AMP-dependent synthetase and ligase 2553019 ydiD 1083316 ydiD Nitrosomonas europaea ATCC 19718 AMP-dependent synthetase and ligase NP_842346.1 2551337 R 228410 CDS NP_842347.1 30250277 1083317 complement(2553016..2554902) 1 NC_004757.1 L-carnitine dehydratase 2554902 1083317 NE2350 Nitrosomonas europaea ATCC 19718 L-carnitine dehydratase NP_842347.1 2553016 R 228410 CDS NP_842348.1 30250278 1083318 complement(2554940..2555212) 1 NC_004757.1 hypothetical protein 2555212 1083318 NE2351 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842348.1 2554940 R 228410 CDS NP_842349.1 30250279 1083319 complement(2555419..2555865) 1 NC_004757.1 Mov34 family protein 2555865 1083319 NE2352 Nitrosomonas europaea ATCC 19718 Mov34 family protein NP_842349.1 2555419 R 228410 CDS NP_842350.1 30250280 1083320 complement(2555967..2557139) 1 NC_004757.1 molybdopterin/thiamine biosynthesis family protein 2557139 moeZ 1083320 moeZ Nitrosomonas europaea ATCC 19718 molybdopterin/thiamine biosynthesis family protein NP_842350.1 2555967 R 228410 CDS NP_842351.1 30250281 1083321 complement(2557540..2558205) 1 NC_004757.1 hypothetical protein 2558205 1083321 NE2354 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842351.1 2557540 R 228410 CDS NP_842352.1 30250282 1083322 complement(2558314..2559822) 1 NC_004757.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2559822 lysS 1083322 lysS Nitrosomonas europaea ATCC 19718 lysyl-tRNA synthetase NP_842352.1 2558314 R 228410 CDS NP_842353.1 30250283 1083323 2560102..2561772 1 NC_004757.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2561772 glnS 1083323 glnS Nitrosomonas europaea ATCC 19718 glutaminyl-tRNA synthetase NP_842353.1 2560102 D 228410 CDS NP_842354.1 30250284 1083324 2561933..2562457 1 NC_004757.1 NLP/P60 2562457 1083324 NE2357 Nitrosomonas europaea ATCC 19718 NLP/P60 NP_842354.1 2561933 D 228410 CDS NP_842355.1 30250285 1083325 complement(2562498..2563325) 1 NC_004757.1 hypothetical protein 2563325 1083325 NE2358 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842355.1 2562498 R 228410 CDS NP_842356.1 30250286 1083326 complement(2563325..2565700) 1 NC_004757.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2565700 ppsA 1083326 ppsA Nitrosomonas europaea ATCC 19718 phosphoenolpyruvate synthase NP_842356.1 2563325 R 228410 CDS NP_842357.1 30250287 1083327 complement(2565800..2566183) 1 NC_004757.1 hypothetical protein 2566183 1083327 NE2360 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842357.1 2565800 R 228410 CDS NP_842358.1 30250288 1083330 2567612..2569282 1 NC_004757.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2569282 glnS 1083330 glnS Nitrosomonas europaea ATCC 19718 glutaminyl-tRNA synthetase NP_842358.1 2567612 D 228410 CDS NP_842359.1 30250289 1083331 2569443..2569967 1 NC_004757.1 NLP/P60 2569967 1083331 NE2364 Nitrosomonas europaea ATCC 19718 NLP/P60 NP_842359.1 2569443 D 228410 CDS NP_842360.1 30250290 1083332 complement(2570008..2570835) 1 NC_004757.1 hypothetical protein 2570835 1083332 NE2365 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842360.1 2570008 R 228410 CDS NP_842361.1 30250291 1083333 complement(2570835..2573210) 1 NC_004757.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2573210 ppsA 1083333 ppsA Nitrosomonas europaea ATCC 19718 phosphoenolpyruvate synthase NP_842361.1 2570835 R 228410 CDS NP_842362.1 30250292 1083334 complement(2573310..2573693) 1 NC_004757.1 hypothetical protein 2573693 1083334 NE2367 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842362.1 2573310 R 228410 CDS NP_842363.1 30250293 1083335 2573829..2575055 1 NC_004757.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2575055 1083335 NE2368 Nitrosomonas europaea ATCC 19718 aminotransferase AlaT NP_842363.1 2573829 D 228410 CDS NP_842364.1 30250294 1083336 2575163..2576479 1 NC_004757.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2576479 1083336 NE2369 Nitrosomonas europaea ATCC 19718 homoserine dehydrogenase NP_842364.1 2575163 D 228410 CDS NP_842365.2 161511224 1083337 2576601..2578034 1 NC_004757.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2578034 thrC 1083337 thrC Nitrosomonas europaea ATCC 19718 threonine synthase NP_842365.2 2576601 D 228410 CDS NP_842366.1 30250296 1083338 2578160..2578855 1 NC_004757.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2578855 sdhB 1083338 sdhB Nitrosomonas europaea ATCC 19718 succinate dehydrogenase iron-sulfur subunit NP_842366.1 2578160 D 228410 CDS NP_842367.1 30250297 1083339 2578852..2579085 1 NC_004757.1 hypothetical protein 2579085 1083339 NE2372 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842367.1 2578852 D 228410 CDS NP_842368.1 30250298 1083340 2579143..2580426 1 NC_004757.1 citrate synthase 2580426 gltA 1083340 gltA Nitrosomonas europaea ATCC 19718 citrate synthase NP_842368.1 2579143 D 228410 CDS NP_842369.1 30250299 1083341 2580587..2583445 1 NC_004757.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 2583445 sucA 1083341 sucA Nitrosomonas europaea ATCC 19718 2-oxoglutarate dehydrogenase E1 component NP_842369.1 2580587 D 228410 CDS NP_842370.1 30250300 1083342 2583467..2584744 1 NC_004757.1 sucB; dihydrolipoamide succinyltransferase (component of 2-oxoglutarate dehydrogenase complex) protein 2584744 sucB 1083342 sucB Nitrosomonas europaea ATCC 19718 sucB; dihydrolipoamide succinyltransferase (component of 2-oxoglutarate dehydrogenase complex) protein NP_842370.1 2583467 D 228410 CDS NP_842371.1 30250301 1083343 complement(2584919..2585761) 1 NC_004757.1 hypothetical protein 2585761 1083343 NE2376 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842371.1 2584919 R 228410 CDS NP_842372.1 30250302 1083344 complement(2586274..2586525) 1 NC_004757.1 BolA-like protein 2586525 1083344 NE2377 Nitrosomonas europaea ATCC 19718 BolA-like protein NP_842372.1 2586274 R 228410 CDS NP_842373.1 30250303 1083345 complement(2586565..2587320) 1 NC_004757.1 ABC 2 transport system integral membrane protein 2587320 1083345 NE2378 Nitrosomonas europaea ATCC 19718 ABC 2 transport system integral membrane protein NP_842373.1 2586565 R 228410 CDS NP_842374.1 30250304 1083346 complement(2587317..2588231) 1 NC_004757.1 multidrug ABC transporter ATPase 2588231 1083346 NE2379 Nitrosomonas europaea ATCC 19718 multidrug ABC transporter ATPase NP_842374.1 2587317 R 228410 CDS NP_842375.1 30250305 1083347 complement(2588296..2588637) 1 NC_004757.1 STAS domain-containing protein 2588637 1083347 NE2380 Nitrosomonas europaea ATCC 19718 STAS domain-containing protein NP_842375.1 2588296 R 228410 CDS NP_842376.1 30250306 1083348 complement(2588615..2589232) 1 NC_004757.1 signal peptide protein 2589232 1083348 NE2381 Nitrosomonas europaea ATCC 19718 signal peptide protein NP_842376.1 2588615 R 228410 CDS NP_842377.1 30250307 1083349 complement(2589248..2589727) 1 NC_004757.1 mce related protein 2589727 1083349 NE2382 Nitrosomonas europaea ATCC 19718 mce related protein NP_842377.1 2589248 R 228410 CDS NP_842378.1 30250308 1083350 complement(2589727..2590542) 1 NC_004757.1 hypothetical protein 2590542 1083350 NE2383 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842378.1 2589727 R 228410 CDS NP_842379.1 30250309 1083351 complement(2590562..2591374) 1 NC_004757.1 ABC transporter ATPase 2591374 1083351 NE2384 Nitrosomonas europaea ATCC 19718 ABC transporter ATPase NP_842379.1 2590562 R 228410 CDS NP_842380.1 30250310 1083352 2591501..2592376 1 NC_004757.1 hypothetical protein 2592376 1083352 NE2385 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842380.1 2591501 D 228410 CDS NP_842381.1 30250311 1083353 complement(2592392..2593078) 1 NC_004757.1 SH3 domain-containing protein 2593078 1083353 NE2386 Nitrosomonas europaea ATCC 19718 SH3 domain-containing protein NP_842381.1 2592392 R 228410 CDS NP_842382.1 30250312 1083354 complement(2593171..2593365) 1 NC_004757.1 hypothetical protein 2593365 1083354 NE2387 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842382.1 2593171 R 228410 CDS NP_842383.1 30250313 1083355 2593479..2593817 1 NC_004757.1 CutA1 divalent ion tolerance protein 2593817 cutA 1083355 cutA Nitrosomonas europaea ATCC 19718 CutA1 divalent ion tolerance protein NP_842383.1 2593479 D 228410 CDS NP_842384.1 30250314 1083356 2593830..2595770 1 NC_004757.1 thioredoxin:cytochrome c biogenesis protein transmembrane region 2595770 dsbD 1083356 dsbD Nitrosomonas europaea ATCC 19718 thioredoxin:cytochrome c biogenesis protein transmembrane region NP_842384.1 2593830 D 228410 CDS NP_842385.1 30250315 1083357 2595881..2596429 1 NC_004757.1 thioredoxin 2596429 1083357 NE2390 Nitrosomonas europaea ATCC 19718 thioredoxin NP_842385.1 2595881 D 228410 CDS NP_842386.1 30250316 1083358 complement(2596642..2597892) 1 NC_004757.1 ApbE family lipoprotein 2597892 1083358 NE2391 Nitrosomonas europaea ATCC 19718 ApbE family lipoprotein NP_842386.1 2596642 R 228410 CDS NP_842387.1 30250317 1083359 complement(2597901..2599121) 1 NC_004757.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 2599121 nqrF 1083359 nqrF Nitrosomonas europaea ATCC 19718 Na(+)-translocating NADH-quinone reductase subunit F NP_842387.1 2597901 R 228410 CDS NP_842388.1 30250318 1083360 complement(2599284..2599892) 1 NC_004757.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 2599892 nqrE 1083360 nqrE Nitrosomonas europaea ATCC 19718 Na(+)-translocating NADH-quinone reductase subunit E NP_842388.1 2599284 R 228410 CDS NP_842389.1 30250319 1083361 complement(2599889..2600560) 1 NC_004757.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 2600560 nqrD 1083361 nqrD Nitrosomonas europaea ATCC 19718 Na(+)-translocating NADH-quinone reductase subunit D NP_842389.1 2599889 R 228410 CDS NP_842390.1 30250320 1083362 complement(2600561..2601355) 1 NC_004757.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 2601355 nqrC 1083362 nqrC Nitrosomonas europaea ATCC 19718 Na(+)-translocating NADH-quinone reductase subunit C NP_842390.1 2600561 R 228410 CDS NP_842391.1 30250321 1083363 complement(2601348..2602544) 1 NC_004757.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 2602544 nqrB 1083363 nqrB Nitrosomonas europaea ATCC 19718 Na(+)-translocating NADH-quinone reductase subunit B NP_842391.1 2601348 R 228410 CDS NP_842392.1 30250322 1083364 complement(2602552..2603910) 1 NC_004757.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 2603910 nqrA 1083364 nqrA Nitrosomonas europaea ATCC 19718 Na(+)-translocating NADH-quinone reductase subunit A NP_842392.1 2602552 R 228410 CDS NP_842393.1 30250323 1083365 complement(2604418..2604858) 1 NC_004757.1 hypothetical protein 2604858 1083365 NE2398 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842393.1 2604418 R 228410 CDS NP_842394.1 30250324 1083366 complement(2605057..2606256) 1 NC_004757.1 DnaJ N-terminal domain-containing protein 2606256 1083366 NE2399 Nitrosomonas europaea ATCC 19718 DnaJ N-terminal domain-containing protein NP_842394.1 2605057 R 228410 CDS NP_842395.1 30250325 1083367 complement(2606353..2607534) 1 NC_004757.1 class-I aminotransferase 2607534 PatB 1083367 PatB Nitrosomonas europaea ATCC 19718 class-I aminotransferase NP_842395.1 2606353 R 228410 CDS NP_842396.1 30250326 1083368 complement(2607531..2609648) 1 NC_004757.1 Generic methyltransferase 2609648 1083368 NE2401 Nitrosomonas europaea ATCC 19718 Generic methyltransferase NP_842396.1 2607531 R 228410 CDS NP_842397.1 30250327 1083369 2609855..2612446 1 NC_004757.1 ClpB ATPase dependent protease, chaperonin 2612446 clpB 1083369 clpB Nitrosomonas europaea ATCC 19718 ClpB ATPase dependent protease, chaperonin NP_842397.1 2609855 D 228410 CDS NP_842398.1 30250328 1083370 2612535..2613413 1 NC_004757.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2613413 dapA 1083370 dapA Nitrosomonas europaea ATCC 19718 dihydrodipicolinate synthase NP_842398.1 2612535 D 228410 CDS NP_842399.1 30250329 1083371 2613423..2614580 1 NC_004757.1 transmembrane protein 2614580 1083371 NE2404 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_842399.1 2613423 D 228410 CDS NP_842400.1 30250330 1083372 complement(2615166..2616695) 1 NC_004757.1 virulence factor MVIN-like 2616695 mviN 1083372 mviN Nitrosomonas europaea ATCC 19718 virulence factor MVIN-like NP_842400.1 2615166 R 228410 CDS NP_842401.1 30250331 1083373 complement(2616969..2617541) 1 NC_004757.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 2617541 flhC 1083373 flhC Nitrosomonas europaea ATCC 19718 transcriptional activator FlhC NP_842401.1 2616969 R 228410 CDS NP_842402.1 30250332 1083374 complement(2617567..2617884) 1 NC_004757.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 2617884 flhD 1083374 flhD Nitrosomonas europaea ATCC 19718 transcriptional activator FlhD NP_842402.1 2617567 R 228410 CDS NP_842403.1 30250333 1083375 complement(2618145..2620544) 1 NC_004757.1 DNA internalization-related competence protein ComEC/Rec2 2620544 1083375 NE2408 Nitrosomonas europaea ATCC 19718 DNA internalization-related competence protein ComEC/Rec2 NP_842403.1 2618145 R 228410 CDS NP_842404.1 30250334 1083376 complement(2621108..2621311) 1 NC_004757.1 hypothetical protein 2621311 1083376 NE2409 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842404.1 2621108 R 228410 CDS NP_842405.1 30250335 1083377 complement(2621327..2623399) 1 NC_004757.1 carbon starvation protein CstA 2623399 cstA 1083377 cstA Nitrosomonas europaea ATCC 19718 carbon starvation protein CstA NP_842405.1 2621327 R 228410 CDS NP_842406.1 30250336 1083378 2624480..2625472 1 NC_004757.1 integrase catalytic subunit 2625472 1083378 NE2411 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842406.1 2624480 D 228410 CDS NP_842407.1 30250337 1083379 2625692..2626060 1 NC_004757.1 transposase 2626060 1083379 NE2412 Nitrosomonas europaea ATCC 19718 transposase NP_842407.1 2625692 D 228410 CDS NP_842408.1 30250338 1083380 2625865..2626401 1 NC_004757.1 IS4 family transposase 2626401 1083380 NE2413 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_842408.1 2625865 D 228410 CDS NP_842409.1 30250339 1083381 complement(2626458..2627501) 1 NC_004757.1 integrase catalytic subunit 2627501 1083381 NE2414 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842409.1 2626458 R 228410 CDS NP_842410.1 30250340 1083383 complement(2628459..2630801) 1 NC_004757.1 biotin / lipoyl attachment protein 2630801 1083383 NE2416 Nitrosomonas europaea ATCC 19718 biotin / lipoyl attachment protein NP_842410.1 2628459 R 228410 CDS NP_842411.1 30250341 1083384 complement(2630853..2631512) 1 NC_004757.1 hypothetical protein 2631512 1083384 NE2417 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842411.1 2630853 R 228410 CDS NP_842412.1 30250342 1083385 complement(2631509..2632237) 1 NC_004757.1 hypothetical protein 2632237 1083385 NE2418 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842412.1 2631509 R 228410 CDS NP_842413.1 30250343 1083386 complement(2632315..2633832) 1 NC_004757.1 amino acid permease 2633832 1083386 NE2419 Nitrosomonas europaea ATCC 19718 amino acid permease NP_842413.1 2632315 R 228410 CDS NP_842414.1 30250344 1083387 2634783..2638418 1 NC_004757.1 carbamoyl-phosphate synthase 2638418 1083387 NE2420 Nitrosomonas europaea ATCC 19718 carbamoyl-phosphate synthase NP_842414.1 2634783 D 228410 CDS NP_842415.1 30250345 1083388 complement(2638406..2639791) 1 NC_004757.1 LysM domain-containing protein 2639791 1083388 NE2421 Nitrosomonas europaea ATCC 19718 LysM domain-containing protein NP_842415.1 2638406 R 228410 CDS NP_842416.1 30250346 1083389 complement(2639941..2641089) 1 NC_004757.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 2641089 nrdB 1083389 nrdB Nitrosomonas europaea ATCC 19718 ribonucleotide-diphosphate reductase subunit beta NP_842416.1 2639941 R 228410 CDS NP_842417.1 30250347 1083390 complement(2641130..2643997) 1 NC_004757.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2643997 nrdA 1083390 nrdA Nitrosomonas europaea ATCC 19718 ribonucleotide-diphosphate reductase subunit alpha NP_842417.1 2641130 R 228410 CDS NP_842418.1 30250348 1083393 complement(2647881..2648177) 1 NC_004757.1 hypothetical protein 2648177 1083393 NE2426 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842418.1 2647881 R 228410 CDS NP_842419.1 30250349 1083394 complement(2648208..2648672) 1 NC_004757.1 similar to (D78321) pyrimidine dimer DNA glycosylase [Micrococcus luteus], evalue=2.00e-37, 52% identity; pyrimidine dimer DNA glycosylase 2648672 1083394 NE2427 Nitrosomonas europaea ATCC 19718 pyrimidine dimer DNA glycosylase NP_842419.1 2648208 R 228410 CDS NP_842420.1 30250350 1083395 complement(2648682..2649344) 1 NC_004757.1 hypothetical protein 2649344 1083395 NE2428 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842420.1 2648682 R 228410 CDS NP_842421.1 30250351 1083396 complement(2649963..2650370) 1 NC_004757.1 hypothetical protein 2650370 1083396 NE2429 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842421.1 2649963 R 228410 CDS NP_842422.1 30250352 1083397 complement(2650880..2651056) 1 NC_004757.1 hypothetical protein 2651056 1083397 NE2430 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842422.1 2650880 R 228410 CDS NP_842423.1 30250353 1083398 complement(2651288..2651668) 1 NC_004757.1 PilT domain-containing protein 2651668 1083398 NE2431 Nitrosomonas europaea ATCC 19718 PilT domain-containing protein NP_842423.1 2651288 R 228410 CDS NP_842424.1 30250354 1083399 complement(2652660..2653850) 1 NC_004757.1 hypothetical protein 2653850 1083399 NE2432 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842424.1 2652660 R 228410 CDS NP_842425.1 30250355 1083400 complement(2653861..2656332) 1 NC_004757.1 TonB-dependent receptor protein 2656332 1083400 NE2433 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_842425.1 2653861 R 228410 CDS NP_842426.1 30250356 1083401 complement(2656460..2657476) 1 NC_004757.1 transmembrane sensor 2657476 1083401 NE2434 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_842426.1 2656460 R 228410 CDS NP_842427.1 30250357 1083402 complement(2657490..2658047) 1 NC_004757.1 fecI specialized sigma subunits of RNA polymerase 2658047 fecI 1083402 fecI Nitrosomonas europaea ATCC 19718 fecI specialized sigma subunits of RNA polymerase NP_842427.1 2657490 R 228410 CDS NP_842428.1 30250358 1083403 complement(2658578..2659252) 1 NC_004757.1 hypothetical protein 2659252 1083403 NE2436 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842428.1 2658578 R 228410 CDS NP_842429.1 30250359 1083404 2659527..2661200 1 NC_004757.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2661200 mdoG 1083404 mdoG Nitrosomonas europaea ATCC 19718 glucan biosynthesis protein G NP_842429.1 2659527 D 228410 CDS NP_842430.1 30250360 1083405 2661193..2663796 1 NC_004757.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2663796 mdoH 1083405 mdoH Nitrosomonas europaea ATCC 19718 glucosyltransferase MdoH NP_842430.1 2661193 D 228410 CDS NP_842431.1 30250361 1083406 2664487..2664831 1 NC_004757.1 hypothetical protein 2664831 1083406 NE2439 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842431.1 2664487 D 228410 CDS NP_842432.1 30250362 1083407 2665307..2665621 1 NC_004757.1 hypothetical protein 2665621 1083407 NE2440 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842432.1 2665307 D 228410 CDS NP_842433.1 30250363 1083408 2665658..2665999 1 NC_004757.1 hypothetical protein 2665999 1083408 NE2441 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842433.1 2665658 D 228410 CDS NP_842434.1 30250364 1083409 complement(2666243..2667286) 1 NC_004757.1 integrase catalytic subunit 2667286 1083409 NE2442 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842434.1 2666243 R 228410 CDS NP_842435.1 30250365 1083410 complement(2667489..2667941) 1 NC_004757.1 hypothetical protein 2667941 1083410 NE2443 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842435.1 2667489 R 228410 CDS NP_842436.1 30250366 1083411 complement(2668023..2668475) 1 NC_004757.1 hypothetical protein 2668475 1083411 NE2444 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842436.1 2668023 R 228410 CDS NP_842437.1 30250367 1083412 2669025..2670068 1 NC_004757.1 integrase catalytic subunit 2670068 1083412 NE2445 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842437.1 2669025 D 228410 CDS NP_842438.1 30250368 1083413 complement(2671639..2672214) 1 NC_004757.1 IS4 family transposase 2672214 1083413 NE2446 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_842438.1 2671639 R 228410 CDS NP_842439.1 30250369 1083414 complement(2672019..2672387) 1 NC_004757.1 transposase 2672387 1083414 NE2447 Nitrosomonas europaea ATCC 19718 transposase NP_842439.1 2672019 R 228410 CDS NP_842440.1 30250370 1083416 complement(2672868..2673191) 1 NC_004757.1 hypothetical protein 2673191 1083416 NE2449 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842440.1 2672868 R 228410 CDS NP_842441.1 30250371 1083417 complement(2673252..2674181) 1 NC_004757.1 Mrr restriction system protein 2674181 1083417 NE2450 Nitrosomonas europaea ATCC 19718 Mrr restriction system protein NP_842441.1 2673252 R 228410 CDS NP_842442.1 30250372 1083418 2674754..2675143 1 NC_004757.1 death on curing protein 2675143 1083418 NE2451 Nitrosomonas europaea ATCC 19718 death on curing protein NP_842442.1 2674754 D 228410 CDS NP_842443.1 30250373 1083419 complement(2675202..2677010) 1 NC_004757.1 ABC transporter ATP-binding protein/permease 2677010 abcT3 1083419 abcT3 Nitrosomonas europaea ATCC 19718 ABC transporter ATP-binding protein/permease NP_842443.1 2675202 R 228410 CDS NP_842444.1 30250374 1083420 complement(2677195..2677644) 1 NC_004757.1 single-strand binding protein family 2677644 ssb 1083420 ssb Nitrosomonas europaea ATCC 19718 single-strand binding protein family NP_842444.1 2677195 R 228410 CDS NP_842445.1 30250375 1083421 complement(2677645..2679003) 1 NC_004757.1 major facilitator transporter 2679003 1083421 NE2454 Nitrosomonas europaea ATCC 19718 major facilitator transporter NP_842445.1 2677645 R 228410 CDS NP_842446.1 30250376 1083422 2679119..2681950 1 NC_004757.1 ABC transporter 2681950 uvrA1 1083422 uvrA1 Nitrosomonas europaea ATCC 19718 ABC transporter NP_842446.1 2679119 D 228410 CDS NP_842447.1 30250377 1083423 2681956..2683239 1 NC_004757.1 hydroxypyruvate reductase oxidoreductase protein 2683239 ttuD2 1083423 ttuD2 Nitrosomonas europaea ATCC 19718 hydroxypyruvate reductase oxidoreductase protein NP_842447.1 2681956 D 228410 CDS NP_842448.1 30250378 1083424 complement(2683268..2684275) 1 NC_004757.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2684275 1083424 NE2457 Nitrosomonas europaea ATCC 19718 delta-aminolevulinic acid dehydratase NP_842448.1 2683268 R 228410 CDS NP_842449.1 30250379 1083425 complement(2684420..2685088) 1 NC_004757.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 2685088 engB 1083425 engB Nitrosomonas europaea ATCC 19718 ribosome biogenesis GTP-binding protein YsxC NP_842449.1 2684420 R 228410 CDS NP_842450.1 30250380 1083426 complement(2685107..2685877) 1 NC_004757.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 2685877 birA 1083426 birA Nitrosomonas europaea ATCC 19718 pantothenate kinase NP_842450.1 2685107 R 228410 CDS NP_842451.1 30250381 1083427 complement(2685888..2686901) 1 NC_004757.1 birA ligase: biotin--acetyl-CoA-carboxylase ligase 2686901 birA 1083427 birA Nitrosomonas europaea ATCC 19718 birA ligase: biotin--acetyl-CoA-carboxylase ligase NP_842451.1 2685888 R 228410 CDS NP_842452.1 30250382 1083428 complement(2687065..2687418) 1 NC_004757.1 hypothetical protein 2687418 1083428 NE2461 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842452.1 2687065 R 228410 CDS NP_842453.1 30250383 1083429 complement(2687598..2688419) 1 NC_004757.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2688419 dapD 1083429 dapD Nitrosomonas europaea ATCC 19718 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase NP_842453.1 2687598 R 228410 CDS NP_842454.1 30250384 1083430 complement(2688444..2689646) 1 NC_004757.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2689646 dapC 1083430 dapC Nitrosomonas europaea ATCC 19718 succinyldiaminopimelate transaminase NP_842454.1 2688444 R 228410 CDS NP_842455.1 30250385 1083431 2689747..2690628 1 NC_004757.1 hypothetical protein 2690628 1083431 NE2464 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842455.1 2689747 D 228410 CDS NP_842456.1 30250386 1083432 2690756..2691319 1 NC_004757.1 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2691319 1083432 NE2465 Nitrosomonas europaea ATCC 19718 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen NP_842456.1 2690756 D 228410 CDS NP_842457.1 30250387 1083433 2691464..2692003 1 NC_004757.1 lipoprotein 2692003 1083433 NE2466 Nitrosomonas europaea ATCC 19718 lipoprotein NP_842457.1 2691464 D 228410 CDS NP_842458.1 30250388 1083434 complement(2692019..2692804) 1 NC_004757.1 Band 7 protein 2692804 1083434 NE2467 Nitrosomonas europaea ATCC 19718 Band 7 protein NP_842458.1 2692019 R 228410 CDS NP_842459.1 30250389 1083435 complement(2692806..2694059) 1 NC_004757.1 hypothetical protein 2694059 1083435 NE2468 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842459.1 2692806 R 228410 CDS NP_842460.1 30250390 1083436 complement(2694191..2695069) 1 NC_004757.1 IS4 family transposase 2695069 1083436 NE2469 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_842460.1 2694191 R 228410 CDS NP_842461.1 30250391 1083437 complement(2695248..2695850) 1 NC_004757.1 NUDIX hydrolase 2695850 1083437 NE2470 Nitrosomonas europaea ATCC 19718 NUDIX hydrolase NP_842461.1 2695248 R 228410 CDS NP_842462.1 30250392 1083438 complement(2696045..2696959) 1 NC_004757.1 hypothetical protein 2696959 1083438 NE2471 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842462.1 2696045 R 228410 CDS NP_842463.1 30250393 1083439 2697053..2697919 1 NC_004757.1 hypothetical protein 2697919 1083439 NE2472 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842463.1 2697053 D 228410 CDS NP_842464.1 30250394 1083440 complement(2698089..2698922) 1 NC_004757.1 ParB-like nuclease domain-containing protein 2698922 spoOJ 1083440 spoOJ Nitrosomonas europaea ATCC 19718 ParB-like nuclease domain-containing protein NP_842464.1 2698089 R 228410 CDS NP_842465.1 30250395 1083441 complement(2698974..2699738) 1 NC_004757.1 ParA family ATPase 2699738 parA2 1083441 parA2 Nitrosomonas europaea ATCC 19718 ParA family ATPase NP_842465.1 2698974 R 228410 CDS NP_842466.1 30250396 1083442 complement(2699804..2700448) 1 NC_004757.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 2700448 gidB 1083442 gidB Nitrosomonas europaea ATCC 19718 16S rRNA methyltransferase GidB NP_842466.1 2699804 R 228410 CDS NP_842467.1 30250397 1083443 complement(2700423..2702342) 1 NC_004757.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2702342 gidA 1083443 gidA Nitrosomonas europaea ATCC 19718 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA NP_842467.1 2700423 R 228410 CDS NP_842468.1 30250398 1083444 complement(2702595..2703056) 1 NC_004757.1 hypothetical protein 2703056 1083444 NE2477 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842468.1 2702595 R 228410 CDS NP_842469.1 30250399 1083445 complement(2703064..2703387) 1 NC_004757.1 hypothetical protein 2703387 1083445 NE2478 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842469.1 2703064 R 228410 CDS NP_842470.1 30250400 1083446 2703635..2705155 1 NC_004757.1 appC; oligopeptide ABC transporter 2705155 1083446 NE2479 Nitrosomonas europaea ATCC 19718 appC; oligopeptide ABC transporter NP_842470.1 2703635 D 228410 CDS NP_842471.1 30250401 1083447 2705152..2707233 1 NC_004757.1 peptide ABC transporter ATPase 2707233 dppF 1083447 dppF Nitrosomonas europaea ATCC 19718 peptide ABC transporter ATPase NP_842471.1 2705152 D 228410 CDS NP_842472.1 30250402 1083448 2707230..2708837 1 NC_004757.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 2708837 prfC 1083448 prfC Nitrosomonas europaea ATCC 19718 peptide chain release factor 3 NP_842472.1 2707230 D 228410 CDS NP_842473.1 30250403 1083450 complement(2710395..2711345) 1 NC_004757.1 integrase catalytic subunit 2711345 1083450 NE2483 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842473.1 2710395 R 228410 CDS NP_842474.1 30250404 1083452 complement(2712764..2713816) 1 NC_004757.1 transmembrane sensor 2713816 1083452 NE2485 Nitrosomonas europaea ATCC 19718 transmembrane sensor NP_842474.1 2712764 R 228410 CDS NP_842475.1 30250405 1083453 complement(2713813..2714454) 1 NC_004757.1 ECF subfamily RNA polymerase sigma factor 2714454 1083453 NE2486 Nitrosomonas europaea ATCC 19718 ECF subfamily RNA polymerase sigma factor NP_842475.1 2713813 R 228410 CDS NP_842476.1 30250406 1083454 2714683..2715813 1 NC_004757.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 2715813 flhB 1083454 flhB Nitrosomonas europaea ATCC 19718 flagellar biosynthesis protein FlhB NP_842476.1 2714683 D 228410 CDS NP_842477.1 30250407 1083455 2715861..2717945 1 NC_004757.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 2717945 flhA 1083455 flhA Nitrosomonas europaea ATCC 19718 flagellar biosynthesis protein FlhA NP_842477.1 2715861 D 228410 CDS NP_842478.1 30250408 1083456 2717942..2719201 1 NC_004757.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 2719201 flhF 1083456 flhF Nitrosomonas europaea ATCC 19718 flagellar biosynthesis regulator FlhF NP_842478.1 2717942 D 228410 CDS NP_842479.1 30250409 1083457 2719188..2720081 1 NC_004757.1 MinD-like protein 2720081 1083457 NE2490 Nitrosomonas europaea ATCC 19718 MinD-like protein NP_842479.1 2719188 D 228410 CDS NP_842480.1 30250410 1083458 2720090..2720800 1 NC_004757.1 RNA polymerase sigma-70 factor family protein 2720800 fliA 1083458 fliA Nitrosomonas europaea ATCC 19718 RNA polymerase sigma-70 factor family protein NP_842480.1 2720090 D 228410 CDS NP_842481.1 30250411 1083459 complement(2720813..2721988) 1 NC_004757.1 general substrate transporters 2721988 1083459 NE2492 Nitrosomonas europaea ATCC 19718 general substrate transporters NP_842481.1 2720813 R 228410 CDS NP_842482.1 30250412 1083460 complement(2722018..2722596) 1 NC_004757.1 hypothetical protein 2722596 1083460 NE2493 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842482.1 2722018 R 228410 CDS NP_842483.1 30250413 1083461 complement(2723011..2724072) 1 NC_004757.1 hypothetical protein 2724072 1083461 NE2494 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842483.1 2723011 R 228410 CDS NP_842484.1 30250414 1083462 complement(2724072..2725904) 1 NC_004757.1 ABC transporter 2725904 1083462 NE2495 Nitrosomonas europaea ATCC 19718 ABC transporter NP_842484.1 2724072 R 228410 CDS NP_842485.1 30250415 1083463 complement(2725901..2727544) 1 NC_004757.1 restriction modification system, type I 2727544 1083463 NE2496 Nitrosomonas europaea ATCC 19718 restriction modification system, type I NP_842485.1 2725901 R 228410 CDS NP_842486.1 30250416 1083464 complement(2727541..2729202) 1 NC_004757.1 hsdM; type I restriction modification enzyme methylase subunit 2729202 1083464 NE2497 Nitrosomonas europaea ATCC 19718 hsdM; type I restriction modification enzyme methylase subunit NP_842486.1 2727541 R 228410 CDS NP_842487.1 30250417 1083465 complement(2729205..2730011) 1 NC_004757.1 hypothetical protein 2730011 1083465 NE2498 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842487.1 2729205 R 228410 CDS NP_842488.1 30250418 1083466 complement(2730057..2732858) 1 NC_004757.1 Blast hits say this is a Type 1 restriction modification system endonuclease R; DEAD/DEAH box helicase 2732858 hsdR 1083466 hsdR Nitrosomonas europaea ATCC 19718 DEAD/DEAH box helicase NP_842488.1 2730057 R 228410 CDS NP_842489.1 30250419 1083467 2733540..2733980 1 NC_004757.1 hypothetical protein 2733980 1083467 NE2500 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842489.1 2733540 D 228410 CDS NP_842490.1 30250420 1083468 2733973..2735307 1 NC_004757.1 L-sorbosone dehydrogenase 2735307 1083468 NE2501 Nitrosomonas europaea ATCC 19718 L-sorbosone dehydrogenase NP_842490.1 2733973 D 228410 CDS NP_842491.1 30250421 1083469 2735317..2735571 1 NC_004757.1 outer membrane receptor for iron transport 2735571 1083469 NE2502 Nitrosomonas europaea ATCC 19718 outer membrane receptor for iron transport NP_842491.1 2735317 D 228410 CDS NP_842492.1 30250422 1083470 2735608..2737443 1 NC_004757.1 TonB-dependent receptor protein 2737443 1083470 NE2503 Nitrosomonas europaea ATCC 19718 TonB-dependent receptor protein NP_842492.1 2735608 D 228410 CDS NP_842493.1 30250423 1083471 complement(2737580..2738458) 1 NC_004757.1 IS4 family transposase 2738458 1083471 NE2504 Nitrosomonas europaea ATCC 19718 IS4 family transposase NP_842493.1 2737580 R 228410 CDS NP_842494.1 30250424 1083472 2738984..2740108 1 NC_004757.1 hypothetical protein 2740108 1083472 NE2505 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842494.1 2738984 D 228410 CDS NP_842495.1 30250425 1083473 2740129..2740404 1 NC_004757.1 hypothetical protein 2740404 1083473 NE2506 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842495.1 2740129 D 228410 CDS NP_842496.1 30250426 1083474 complement(2740829..2741791) 1 NC_004757.1 AraC family transcription regulator 2741791 1083474 NE2507 Nitrosomonas europaea ATCC 19718 AraC family transcription regulator NP_842496.1 2740829 R 228410 CDS NP_842497.1 30250427 1083475 2741913..2742650 1 NC_004757.1 hypothetical protein 2742650 1083475 NE2508 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842497.1 2741913 D 228410 CDS NP_842498.1 30250428 1083476 complement(2742762..2743136) 1 NC_004757.1 hypothetical protein 2743136 1083476 NE2509 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842498.1 2742762 R 228410 CDS NP_842499.1 30250429 1083477 complement(2743199..2744263) 1 NC_004757.1 NADH:flavin oxidoreductase 2744263 1083477 NE2510 Nitrosomonas europaea ATCC 19718 NADH:flavin oxidoreductase NP_842499.1 2743199 R 228410 CDS NP_842500.1 30250430 1083478 complement(2744407..2745420) 1 NC_004757.1 AraC family transcription regulator 2745420 1083478 NE2511 Nitrosomonas europaea ATCC 19718 AraC family transcription regulator NP_842500.1 2744407 R 228410 CDS NP_842501.1 30250431 1083479 2745484..2745786 1 NC_004757.1 hypothetical protein 2745786 1083479 NE2512 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842501.1 2745484 D 228410 CDS NP_842502.1 30250432 1083480 complement(2746431..2747177) 1 NC_004757.1 hypothetical protein 2747177 1083480 NE2513 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842502.1 2746431 R 228410 CDS NP_842503.1 30250433 1083481 2747428..2748342 1 NC_004757.1 hypothetical protein 2748342 1083481 NE2514 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842503.1 2747428 D 228410 CDS NP_842504.1 30250434 1083482 complement(2748517..2749368) 1 NC_004757.1 integrase catalytic subunit 2749368 1083482 NE2515 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842504.1 2748517 R 228410 CDS NP_842505.1 30250435 1083483 complement(2749422..2749745) 1 NC_004757.1 transposase IS911 2749745 1083483 NE2516 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_842505.1 2749422 R 228410 CDS NP_842506.1 30250436 1083484 complement(2749717..2750460) 1 NC_004757.1 hypothetical protein 2750460 1083484 NE2517 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842506.1 2749717 R 228410 CDS NP_842507.1 30250437 1083485 complement(2750475..2751422) 1 NC_004757.1 patatin 2751422 1083485 NE2518 Nitrosomonas europaea ATCC 19718 patatin NP_842507.1 2750475 R 228410 CDS NP_842508.1 30250438 1083486 2751702..2752607 1 NC_004757.1 hypothetical protein 2752607 1083486 NE2519 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842508.1 2751702 D 228410 CDS NP_842509.1 30250439 1083487 2752609..2754687 1 NC_004757.1 ATP-dependent DNA helicase RecQ 2754687 1083487 NE2520 Nitrosomonas europaea ATCC 19718 ATP-dependent DNA helicase RecQ NP_842509.1 2752609 D 228410 CDS NP_842510.1 30250440 1083488 2754684..2756093 1 NC_004757.1 hypothetical protein 2756093 1083488 NE2521 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842510.1 2754684 D 228410 CDS NP_842511.1 30250441 1083489 2756159..2757505 1 NC_004757.1 type I restriction-modification system methylation subunit 2757505 1083489 NE2522 Nitrosomonas europaea ATCC 19718 type I restriction-modification system methylation subunit NP_842511.1 2756159 D 228410 CDS NP_842512.1 30250442 1083490 2757463..2757693 1 NC_004757.1 hypothetical protein 2757693 1083490 NE2523 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842512.1 2757463 D 228410 CDS NP_842513.1 30250443 1083491 2757998..2759512 1 NC_004757.1 type I restriction-modification system methylation subunit 2759512 1083491 NE2524 Nitrosomonas europaea ATCC 19718 type I restriction-modification system methylation subunit NP_842513.1 2757998 D 228410 CDS NP_842514.1 30250444 1083492 2759505..2761391 1 NC_004757.1 ATP-dependent DNA helicase RecG-like protein 2761391 1083492 NE2525 Nitrosomonas europaea ATCC 19718 ATP-dependent DNA helicase RecG-like protein NP_842514.1 2759505 D 228410 CDS NP_842515.1 30250445 1083493 2761384..2762574 1 NC_004757.1 restriction modification system, type I 2762574 1083493 NE2526 Nitrosomonas europaea ATCC 19718 restriction modification system, type I NP_842515.1 2761384 D 228410 CDS NP_842516.1 30250446 1083494 2762574..2765573 1 NC_004757.1 restriction enzyme type I helicase subunits and related helicases 2765573 1083494 NE2527 Nitrosomonas europaea ATCC 19718 restriction enzyme type I helicase subunits and related helicases NP_842516.1 2762574 D 228410 CDS NP_842517.1 30250447 1083495 2765586..2767808 1 NC_004757.1 ATPase AAA 2767808 1083495 NE2528 Nitrosomonas europaea ATCC 19718 ATPase AAA NP_842517.1 2765586 D 228410 CDS NP_842518.1 30250448 1083496 2767808..2768944 1 NC_004757.1 McrC protein together with McrB forms the McrBC restriction system; recognizes N4- and C5-methylcytosine (and 5-hydroxy-methylcytosines); appears to act against 5-methylcytosine preceded by a purine residue; MrcC modulates the specificty of McrB and has DNA cleavage activity; 5-methylcytosine-specific restriction enzyme subunit McrC 2768944 mcrC 1083496 mcrC Nitrosomonas europaea ATCC 19718 5-methylcytosine-specific restriction enzyme subunit McrC NP_842518.1 2767808 D 228410 CDS NP_842519.1 30250449 1083497 2768950..2769963 1 NC_004757.1 hypothetical protein 2769963 1083497 NE2530 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842519.1 2768950 D 228410 CDS NP_842520.1 30250450 1083498 complement(2769978..2770736) 1 NC_004757.1 similar to (NC_003295) PROBABLE SIGNAL PEPTIDE PROTEIN [Ralstonia solanacearum], evalue=4.00e-30, 48% identity; signal peptide 2770736 1083498 NE2531 Nitrosomonas europaea ATCC 19718 signal peptide NP_842520.1 2769978 R 228410 CDS NP_842521.1 30250451 1083499 complement(2770889..2771740) 1 NC_004757.1 integrase catalytic subunit 2771740 1083499 NE2532 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842521.1 2770889 R 228410 CDS NP_842522.1 30250452 1083500 complement(2771794..2772117) 1 NC_004757.1 transposase IS911 2772117 1083500 NE2533 Nitrosomonas europaea ATCC 19718 transposase IS911 NP_842522.1 2771794 R 228410 CDS NP_842523.1 30250453 1083501 complement(2774013..2774477) 1 NC_004757.1 glycoside hydrolase family protein 2774477 1083501 NE2534 Nitrosomonas europaea ATCC 19718 glycoside hydrolase family protein NP_842523.1 2774013 R 228410 CDS NP_842524.1 30250454 1083502 complement(2774474..2775652) 1 NC_004757.1 hypothetical protein 2775652 1083502 NE2535 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842524.1 2774474 R 228410 CDS NP_842525.1 30250455 1083503 2775828..2776778 1 NC_004757.1 integrase catalytic subunit 2776778 1083503 NE2536 Nitrosomonas europaea ATCC 19718 integrase catalytic subunit NP_842525.1 2775828 D 228410 CDS NP_842526.1 30250456 1083504 2776868..2777188 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 2777188 sinR 1083504 sinR Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_842526.1 2776868 D 228410 CDS NP_842527.1 30250457 1083505 2777185..2778096 1 NC_004757.1 hypothetical protein 2778096 1083505 NE2538 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842527.1 2777185 D 228410 CDS NP_842528.1 30250458 1083506 2778114..2779328 1 NC_004757.1 hypothetical protein 2779328 1083506 NE2539 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842528.1 2778114 D 228410 CDS NP_842529.1 30250459 1083507 2779738..2780175 1 NC_004757.1 bacteriophage-like protein 2780175 1083507 NE2540 Nitrosomonas europaea ATCC 19718 bacteriophage-like protein NP_842529.1 2779738 D 228410 CDS NP_842530.1 30250460 1083508 2780172..2781527 1 NC_004757.1 site-specific recombinase 2781527 1083508 NE2541 Nitrosomonas europaea ATCC 19718 site-specific recombinase NP_842530.1 2780172 D 228410 CDS NP_842531.1 30250461 1083509 2781524..2781991 1 NC_004757.1 LacI family regulatory protein 2781991 1083509 NE2542 Nitrosomonas europaea ATCC 19718 LacI family regulatory protein NP_842531.1 2781524 D 228410 CDS NP_842532.1 30250462 1083510 complement(2782013..2782864) 1 NC_004757.1 hypothetical protein 2782864 1083510 NE2543 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842532.1 2782013 R 228410 CDS NP_842533.1 30250463 1083511 complement(2782876..2783544) 1 NC_004757.1 helix-hairpin-helix DNA-binding motif-containing protein 2783544 1083511 NE2544 Nitrosomonas europaea ATCC 19718 helix-hairpin-helix DNA-binding motif-containing protein NP_842533.1 2782876 R 228410 CDS NP_842534.1 30250464 1083512 complement(2783564..2784367) 1 NC_004757.1 hypothetical protein 2784367 1083512 NE2545 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842534.1 2783564 R 228410 CDS NP_842535.1 30250465 1083514 complement(2785209..2785856) 1 NC_004757.1 HAD family hydrolase 2785856 1083514 NE2546 Nitrosomonas europaea ATCC 19718 HAD family hydrolase NP_842535.1 2785209 R 228410 CDS NP_842536.1 30250466 1083515 complement(2785883..2786590) 1 NC_004757.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2786590 ubiG 1083515 ubiG Nitrosomonas europaea ATCC 19718 3-demethylubiquinone-9 3-methyltransferase NP_842536.1 2785883 R 228410 CDS NP_842537.1 30250467 1083516 complement(2786767..2787462) 1 NC_004757.1 outer membrane protein 2787462 1083516 NE2548 Nitrosomonas europaea ATCC 19718 outer membrane protein NP_842537.1 2786767 R 228410 CDS NP_842538.1 30250468 1083517 2787819..2788589 1 NC_004757.1 multidrug ABC transporter ATPase 2788589 1083517 NE2549 Nitrosomonas europaea ATCC 19718 multidrug ABC transporter ATPase NP_842538.1 2787819 D 228410 CDS NP_842539.1 30250469 1083518 2788586..2789332 1 NC_004757.1 ABC transporter permease 2789332 1083518 NE2550 Nitrosomonas europaea ATCC 19718 ABC transporter permease NP_842539.1 2788586 D 228410 CDS NP_842540.1 30250470 1083519 2789356..2790717 1 NC_004757.1 hypothetical protein 2790717 1083519 NE2551 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842540.1 2789356 D 228410 CDS NP_842541.1 30250471 1083520 2790763..2791578 1 NC_004757.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 2791578 mutM 1083520 mutM Nitrosomonas europaea ATCC 19718 formamidopyrimidine-DNA glycosylase NP_842541.1 2790763 D 228410 CDS NP_842542.1 30250472 1083521 complement(2791597..2792235) 1 NC_004757.1 hypothetical protein 2792235 1083521 NE2553 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842542.1 2791597 R 228410 CDS NP_842543.1 30250473 1083522 complement(2792248..2794062) 1 NC_004757.1 GTP-binding elongation factor 2794062 typA 1083522 typA Nitrosomonas europaea ATCC 19718 GTP-binding elongation factor NP_842543.1 2792248 R 228410 CDS NP_842544.1 30250474 1083523 2794192..2794797 1 NC_004757.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2794797 1083523 NE2555 Nitrosomonas europaea ATCC 19718 riboflavin synthase subunit alpha NP_842544.1 2794192 D 228410 CDS NP_842545.1 30250475 1083524 2794794..2795903 1 NC_004757.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 2795903 ribAB 1083524 ribAB Nitrosomonas europaea ATCC 19718 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein NP_842545.1 2794794 D 228410 CDS NP_842546.1 30250476 1083525 2795959..2796453 1 NC_004757.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2796453 ribH 1083525 ribH Nitrosomonas europaea ATCC 19718 6,7-dimethyl-8-ribityllumazine synthase NP_842546.1 2795959 D 228410 CDS NP_842547.1 30250477 1083526 2796450..2796953 1 NC_004757.1 antitermination protein NusB 2796953 nusB 1083526 nusB Nitrosomonas europaea ATCC 19718 antitermination protein NusB NP_842547.1 2796450 D 228410 CDS NP_842548.1 30250478 1083527 2797021..2798019 1 NC_004757.1 AIR synthase 2798019 thiL 1083527 thiL Nitrosomonas europaea ATCC 19718 AIR synthase NP_842548.1 2797021 D 228410 CDS NP_842549.1 30250479 1083528 2797997..2798539 1 NC_004757.1 similar to (NC_003295) PROBABLE PHOSPHATIDYL-GLYCEROPHOSPHATASE HYDROLASE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] evalue=2.00e-33, 51% identity; phosphatidyl-glycerophosphatase hydrolase transmembrane protein 2798539 pgpA 1083528 pgpA Nitrosomonas europaea ATCC 19718 phosphatidyl-glycerophosphatase hydrolase transmembrane protein NP_842549.1 2797997 D 228410 CDS NP_842550.1 30250480 1083529 2798536..2799078 1 NC_004757.1 competence-damaged protein 2799078 ygaD 1083529 ygaD Nitrosomonas europaea ATCC 19718 competence-damaged protein NP_842550.1 2798536 D 228410 CDS NP_842551.1 30250481 1083530 complement(2799257..2800129) 1 NC_004757.1 hypothetical protein 2800129 1083530 NE2562 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842551.1 2799257 R 228410 CDS NP_842552.1 30250482 1083532 complement(2800911..2802125) 1 NC_004757.1 porin 2802125 1083532 NE2563 Nitrosomonas europaea ATCC 19718 porin NP_842552.1 2800911 R 228410 CDS NP_842553.1 30250483 1083533 complement(2802439..2804088) 1 NC_004757.1 ATP-dependent DNA helicase RecQ 2804088 recQ 1083533 recQ Nitrosomonas europaea ATCC 19718 ATP-dependent DNA helicase RecQ NP_842553.1 2802439 R 228410 CDS NP_842554.1 30250484 1083534 complement(2804085..2804495) 1 NC_004757.1 S4 domain-containing protein 2804495 1083534 NE2565 Nitrosomonas europaea ATCC 19718 S4 domain-containing protein NP_842554.1 2804085 R 228410 CDS NP_842555.1 30250485 1083535 complement(2804585..2805418) 1 NC_004757.1 hypothetical protein 2805418 1083535 NE2566 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842555.1 2804585 R 228410 CDS NP_842556.1 30250486 1083536 complement(2805425..2807164) 1 NC_004757.1 hypothetical protein 2807164 1083536 NE2567 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842556.1 2805425 R 228410 CDS NP_842557.1 30250487 1083537 complement(2807279..2807650) 1 NC_004757.1 ArsR family regulatory protein 2807650 1083537 NE2568 Nitrosomonas europaea ATCC 19718 ArsR family regulatory protein NP_842557.1 2807279 R 228410 CDS NP_842558.1 30250488 1083538 complement(2807647..2808114) 1 NC_004757.1 transmembrane protein 2808114 1083538 NE2569 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_842558.1 2807647 R 228410 CDS NP_842559.1 30250489 1083539 complement(2808142..2808570) 1 NC_004757.1 transmembrane protein 2808570 1083539 NE2570 Nitrosomonas europaea ATCC 19718 transmembrane protein NP_842559.1 2808142 R 228410 CDS NP_842560.1 30250490 1083540 2808678..2809541 1 NC_004757.1 metallo-beta-lactamase superfamily protein 2809541 1083540 NE2571 Nitrosomonas europaea ATCC 19718 metallo-beta-lactamase superfamily protein NP_842560.1 2808678 D 228410 CDS NP_842561.1 30250491 1083541 complement(2809591..2810172) 1 NC_004757.1 hypothetical protein 2810172 1083541 NE2572 Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842561.1 2809591 R 228410 CDS NP_842562.1 30250492 1083542 complement(2810199..2811935) 1 NC_004757.1 hypothetical protein 2811935 ycbB 1083542 ycbB Nitrosomonas europaea ATCC 19718 hypothetical protein NP_842562.1 2810199 R 228410 CDS