-- dump date 20140619_164507 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 228410000001 SEQ_END SEQ_END NC_004757.1 2812094 2812094 DR NC_004757.1; contig end 2812094..2812094 Nitrosomonas europaea ATCC 19718 NP_840102.1 CDS dnaA NC_004757.1 211 1590 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 211..1590 Nitrosomonas europaea ATCC 19718 1081071 NP_840103.1 CDS dnaN NC_004757.1 1791 2912 D DNA polymerase III subunit beta 1791..2912 Nitrosomonas europaea ATCC 19718 1081072 NP_840104.1 CDS gyrB NC_004757.1 2961 5390 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 2961..5390 Nitrosomonas europaea ATCC 19718 1081074 NP_840105.1 CDS NE0004 NC_004757.1 5413 5856 D hypothetical protein 5413..5856 Nitrosomonas europaea ATCC 19718 1083543 NP_840106.1 CDS NE0005 NC_004757.1 5907 6638 D 16S pseudouridylate synthase 5907..6638 Nitrosomonas europaea ATCC 19718 1081078 NP_840107.1 CDS fdxA NC_004757.1 7350 7673 D 7Fe ferredoxin 7350..7673 Nitrosomonas europaea ATCC 19718 1081087 NP_840108.1 CDS NE0007 NC_004757.1 7717 8076 D hypothetical protein 7717..8076 Nitrosomonas europaea ATCC 19718 1082289 NP_840109.1 CDS mfd NC_004757.1 8100 11564 R mfd: transcription-repair coupling factor complement(8100..11564) Nitrosomonas europaea ATCC 19718 1081088 NP_840110.1 CDS NE0009 NC_004757.1 11591 12892 R MgtC family membrane protein complement(11591..12892) Nitrosomonas europaea ATCC 19718 1083544 NP_840111.1 CDS recJ NC_004757.1 12864 14627 R recJ: single-stranded-DNA-specific exonuclease complement(12864..14627) Nitrosomonas europaea ATCC 19718 1081014 NP_840112.1 CDS cyp NC_004757.1 14771 15367 R similar to cytochrome P460 precursor - Nitrosomonas europaea gb|AAA62668.1| (U15305) cytochrome P460 precursor [Nitrosomonas europaea], evalue=1.00e-112; cytochrome P460 complement(14771..15367) Nitrosomonas europaea ATCC 19718 1081013 NP_840113.1 CDS trpC NC_004757.1 15451 16371 R indole-3-glycerol phosphate synthase complement(15451..16371) Nitrosomonas europaea ATCC 19718 1081005 NP_840114.1 CDS trpD NC_004757.1 16373 17398 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(16373..17398) Nitrosomonas europaea ATCC 19718 1081001 NP_840115.1 CDS trpG NC_004757.1 17395 17994 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(17395..17994) Nitrosomonas europaea ATCC 19718 1081056 NP_840116.1 CDS yfhK NC_004757.1 18115 19614 D sensory transduction histidine kinase 18115..19614 Nitrosomonas europaea ATCC 19718 1083210 NP_840117.1 CDS NE0016 NC_004757.1 19611 20153 D hypothetical protein 19611..20153 Nitrosomonas europaea ATCC 19718 1081057 NP_840118.1 CDS yfhA NC_004757.1 20166 21533 D transcriptional regulator of two-component regulator protein 20166..21533 Nitrosomonas europaea ATCC 19718 1081061 NP_840119.1 CDS NE0018 NC_004757.1 21543 22748 R PDZ domain-containing protein complement(21543..22748) Nitrosomonas europaea ATCC 19718 1081059 NP_840120.1 CDS purL NC_004757.1 22874 26788 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(22874..26788) Nitrosomonas europaea ATCC 19718 1082396 NP_840121.1 CDS NE0020 NC_004757.1 26860 28377 D COGS group COG0063, predicted sugar kinase, evalue=8e-37; sugar kinase 26860..28377 Nitrosomonas europaea ATCC 19718 1081062 NP_840122.1 CDS NE0021 NC_004757.1 28652 29176 D hypothetical protein 28652..29176 Nitrosomonas europaea ATCC 19718 1081064 NP_840123.1 CDS NE0022 NC_004757.1 29244 30401 R alanine dehydrogenase complement(29244..30401) Nitrosomonas europaea ATCC 19718 1081753 NP_840124.1 CDS xthA1 NC_004757.1 30420 31184 R exodeoxyribonuclease III:exodeoxyribonuclease III xth complement(30420..31184) Nitrosomonas europaea ATCC 19718 1081066 NP_840125.1 CDS NE0024 NC_004757.1 31294 31662 D cytochrome c, class I 31294..31662 Nitrosomonas europaea ATCC 19718 1081067 NP_840126.1 CDS NE0025 NC_004757.1 31721 33127 R metallo-beta-lactamase superfamily protein complement(31721..33127) Nitrosomonas europaea ATCC 19718 1081068 NP_840127.1 CDS bioA NC_004757.1 33134 34444 R aminotransferase class-III pyridoxal-phosphate complement(33134..34444) Nitrosomonas europaea ATCC 19718 1081069 NP_840128.1 CDS groES NC_004757.1 34605 34895 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 34605..34895 Nitrosomonas europaea ATCC 19718 1081070 NP_840129.1 CDS groEL NC_004757.1 34935 36578 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 34935..36578 Nitrosomonas europaea ATCC 19718 1081048 NP_840130.1 CDS NE0029 NC_004757.1 36729 37457 D short-chain dehydrogenase/reductase 36729..37457 Nitrosomonas europaea ATCC 19718 1083545 NP_840131.1 CDS tig NC_004757.1 37794 39113 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 37794..39113 Nitrosomonas europaea ATCC 19718 1083548 NP_840132.1 CDS clpP NC_004757.1 39097 39741 D hydrolyzes proteins to small peptides; with the ATPases ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 39097..39741 Nitrosomonas europaea ATCC 19718 1083549 NP_840133.1 CDS clpX NC_004757.1 39802 41082 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 39802..41082 Nitrosomonas europaea ATCC 19718 1083551 NP_840134.1 CDS lon NC_004757.1 41193 43616 D ATP-dependent proteinase La 41193..43616 Nitrosomonas europaea ATCC 19718 1083547 NP_840135.1 CDS NE0034 NC_004757.1 43971 45188 D aminotransferase class-V 43971..45188 Nitrosomonas europaea ATCC 19718 1083553 NP_840136.1 CDS NE0035 NC_004757.1 45481 47934 D ATP-dependent protease LA 45481..47934 Nitrosomonas europaea ATCC 19718 1083550 NP_840137.1 CDS NE0036 NC_004757.1 48009 49331 R Outer membrane efflux protein complement(48009..49331) Nitrosomonas europaea ATCC 19718 1083554 NP_840138.1 CDS pcm NC_004757.1 49394 50050 R pcm; protein-L-isoaspartate o-methyltransferase complement(49394..50050) Nitrosomonas europaea ATCC 19718 1083555 NP_840139.1 CDS thiC NC_004757.1 50259 52157 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 50259..52157 Nitrosomonas europaea ATCC 19718 1083552 NP_840140.1 CDS bacA NC_004757.1 52205 53026 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 52205..53026 Nitrosomonas europaea ATCC 19718 1083557 NP_840141.1 CDS NE0040 NC_004757.1 53027 53479 R rhodanese/cdc25 fold complement(53027..53479) Nitrosomonas europaea ATCC 19718 1083558 NP_840142.1 CDS ppiB NC_004757.1 53561 54052 R cyclophilin type peptidyl-prolyl cis-trans isomerase complement(53561..54052) Nitrosomonas europaea ATCC 19718 1083559 NP_840143.1 CDS ppiA NC_004757.1 54071 54712 R cyclophilin type peptidyl-prolyl cis-trans isomerase complement(54071..54712) Nitrosomonas europaea ATCC 19718 1083560 NP_840144.1 CDS cysS NC_004757.1 54841 56238 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 54841..56238 Nitrosomonas europaea ATCC 19718 1083561 NP_840145.1 CDS NE0044 NC_004757.1 56251 57033 R hypothetical protein complement(56251..57033) Nitrosomonas europaea ATCC 19718 1083556 NP_840146.1 CDS motB NC_004757.1 57039 57962 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(57039..57962) Nitrosomonas europaea ATCC 19718 1083562 NP_840147.1 CDS motA NC_004757.1 58002 58862 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(58002..58862) Nitrosomonas europaea ATCC 19718 1083563 NP_840148.1 CDS NE0047 NC_004757.1 59059 59640 D cytidine and deoxycytidylate deaminase zinc-binding region 59059..59640 Nitrosomonas europaea ATCC 19718 1083566 NP_840149.1 CDS NE0048 NC_004757.1 59943 60731 D class II aldolase/adducin domain-containing protein 59943..60731 Nitrosomonas europaea ATCC 19718 1083564 NP_840150.1 CDS NE0049 NC_004757.1 60731 64420 D sensory transduction histidine kinase 60731..64420 Nitrosomonas europaea ATCC 19718 1083567 NP_840151.1 CDS sucC NC_004757.1 64417 65610 D ATP-citrate lyase/succinyl-CoA ligase:ATP-grasp domain 64417..65610 Nitrosomonas europaea ATCC 19718 1083565 NP_840152.1 CDS sucD NC_004757.1 65613 66488 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 65613..66488 Nitrosomonas europaea ATCC 19718 1083568 NP_840153.1 CDS NE0052 NC_004757.1 66507 66854 D hypothetical protein 66507..66854 Nitrosomonas europaea ATCC 19718 1083569 NP_840154.1 CDS NE0053 NC_004757.1 66873 68300 D D-alanyl-D-alanine carboxypeptidase 66873..68300 Nitrosomonas europaea ATCC 19718 1083570 NP_840155.1 CDS NE0054 NC_004757.1 74631 76334 D ABC transporter 74631..76334 Nitrosomonas europaea ATCC 19718 1083578 NP_840156.1 CDS ispZ NC_004757.1 76453 76998 D Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 76453..76998 Nitrosomonas europaea ATCC 19718 1083580 NP_840157.1 CDS mutY NC_004757.1 77027 78160 D HhH-GPD 77027..78160 Nitrosomonas europaea ATCC 19718 1083579 NP_840158.1 CDS NE0057 NC_004757.1 78153 78779 D 5-formyltetrahydrofolate cyclo-ligase 78153..78779 Nitrosomonas europaea ATCC 19718 1083576 NP_840159.1 CDS NE0058 NC_004757.1 78837 79472 R catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; aromatic acid decarboxylase complement(78837..79472) Nitrosomonas europaea ATCC 19718 1083581 NP_840160.1 CDS NE0059 NC_004757.1 79491 80462 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(79491..80462) Nitrosomonas europaea ATCC 19718 1083583 NP_840161.1 CDS ptsN NC_004757.1 80449 80919 R phosphotransferase system mannitol/fructose-specific IIA domain-containing protein complement(80449..80919) Nitrosomonas europaea ATCC 19718 1083584 NP_840162.1 CDS NE0061 NC_004757.1 81151 81486 R sigma-54 modulation protein / S30EA ribosomal protein complement(81151..81486) Nitrosomonas europaea ATCC 19718 1083582 NP_840163.1 CDS rpoN1 NC_004757.1 81662 83125 R RNA polymerase sigma-54 factor family protein complement(81662..83125) Nitrosomonas europaea ATCC 19718 1083585 NP_840164.1 CDS NE0063 NC_004757.1 83132 83854 R ABC transporter ATPase complement(83132..83854) Nitrosomonas europaea ATCC 19718 1083588 NP_840165.1 CDS NE0064 NC_004757.1 83889 84506 R signal peptide protein complement(83889..84506) Nitrosomonas europaea ATCC 19718 1083586 NP_840166.1 CDS NE0065 NC_004757.1 84563 85144 R hypothetical protein complement(84563..85144) Nitrosomonas europaea ATCC 19718 1083589 NP_840167.1 CDS nadA NC_004757.1 85429 86529 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 85429..86529 Nitrosomonas europaea ATCC 19718 1083587 NP_840168.1 CDS NE0067 NC_004757.1 86529 87353 D hypothetical protein 86529..87353 Nitrosomonas europaea ATCC 19718 1083591 NP_840169.1 CDS NE0068 NC_004757.1 87350 88507 D phospholipase D/transphosphatidylase 87350..88507 Nitrosomonas europaea ATCC 19718 1083592 NP_840170.1 CDS pcnB NC_004757.1 88660 90042 D poly A polymerase family protein 88660..90042 Nitrosomonas europaea ATCC 19718 1083594 NP_840171.1 CDS NE0070 NC_004757.1 90039 90551 D 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 90039..90551 Nitrosomonas europaea ATCC 19718 1083590 NP_840172.1 CDS NE0071 NC_004757.1 90548 91192 D deoxynucleoside kinase 90548..91192 Nitrosomonas europaea ATCC 19718 1083595 NP_840173.1 CDS panB NC_004757.1 91193 92002 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 91193..92002 Nitrosomonas europaea ATCC 19718 1083593 NP_840174.1 CDS panC NC_004757.1 92026 92859 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 92026..92859 Nitrosomonas europaea ATCC 19718 1083596 NP_840175.1 CDS NE0074 NC_004757.1 92896 95451 R alpha-glucan phosphorylase complement(92896..95451) Nitrosomonas europaea ATCC 19718 1083597 NP_840176.1 CDS NE0075 NC_004757.1 95489 96034 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(95489..96034) Nitrosomonas europaea ATCC 19718 1083598 NP_840177.1 CDS NE0076 NC_004757.1 96161 97465 D M48 family peptidase 96161..97465 Nitrosomonas europaea ATCC 19718 1083599 NP_840178.1 CDS phhB NC_004757.1 97462 97803 D 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 97462..97803 Nitrosomonas europaea ATCC 19718 1083601 NP_840179.1 CDS NE0078 NC_004757.1 97800 98744 D ATP-binding protein 97800..98744 Nitrosomonas europaea ATCC 19718 1083602 NP_840180.1 CDS fkpA NC_004757.1 98819 99280 R FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) complement(98819..99280) Nitrosomonas europaea ATCC 19718 1083603 NP_840181.1 CDS NE0080 NC_004757.1 99423 101147 R diguanylate cyclase/phosphodiesterase complement(99423..101147) Nitrosomonas europaea ATCC 19718 1083604 NP_840182.1 CDS NE0081 NC_004757.1 101247 101969 R transmembrane protein complement(101247..101969) Nitrosomonas europaea ATCC 19718 1083600 NP_840183.1 CDS NE0082 NC_004757.1 102223 102756 D hypothetical protein 102223..102756 Nitrosomonas europaea ATCC 19718 1083605 NP_840184.1 CDS NE0083 NC_004757.1 102770 103315 D hypothetical protein 102770..103315 Nitrosomonas europaea ATCC 19718 1083607 NP_840185.1 CDS NE0084 NC_004757.1 103482 103718 D thioredoxin 103482..103718 Nitrosomonas europaea ATCC 19718 1083606 NP_840186.1 CDS NE0085 NC_004757.1 103819 105078 R SAM-binding motif-containing protein complement(103819..105078) Nitrosomonas europaea ATCC 19718 1083608 NP_840187.1 CDS NE0086 NC_004757.1 105092 105817 R hypothetical protein complement(105092..105817) Nitrosomonas europaea ATCC 19718 1083610 NP_840188.1 CDS purN NC_004757.1 105814 106446 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(105814..106446) Nitrosomonas europaea ATCC 19718 1083611 NP_840189.1 CDS purM NC_004757.1 106458 107516 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(106458..107516) Nitrosomonas europaea ATCC 19718 1083609 NP_840190.1 CDS NE0089 NC_004757.1 107576 108634 D hypothetical protein 107576..108634 Nitrosomonas europaea ATCC 19718 1083613 NP_840191.1 CDS NE0090 NC_004757.1 108767 112162 R guanylate cyclase complement(108767..112162) Nitrosomonas europaea ATCC 19718 1083612 NP_840192.1 CDS NE0091 NC_004757.1 112455 114539 R universal stress protein complement(112455..114539) Nitrosomonas europaea ATCC 19718 1083617 NP_840193.1 CDS NE0092 NC_004757.1 114744 115454 R hypothetical protein complement(114744..115454) Nitrosomonas europaea ATCC 19718 1083616 NP_840194.1 CDS NE0093 NC_004757.1 115940 120313 R recQ; ATP-dependent DNA helicase complement(115940..120313) Nitrosomonas europaea ATCC 19718 1083618 NP_840195.1 CDS guaA NC_004757.1 121762 123321 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(121762..123321) Nitrosomonas europaea ATCC 19718 1083614 NP_840196.1 CDS guaB NC_004757.1 123333 124796 R guaB; inosine-5'-monophosphate dehydrogenase oxidoreductase protein complement(123333..124796) Nitrosomonas europaea ATCC 19718 1083620 NP_840197.1 CDS NE0096 NC_004757.1 124910 125272 R hypothetical protein complement(124910..125272) Nitrosomonas europaea ATCC 19718 1083621 NP_840198.1 CDS NE0097 NC_004757.1 125318 125983 R HAD family hydrolase complement(125318..125983) Nitrosomonas europaea ATCC 19718 1083619 NP_840199.1 CDS NE0098 NC_004757.1 126117 126779 R DnaA regulatory inactivator Hda complement(126117..126779) Nitrosomonas europaea ATCC 19718 1083615 NP_840200.1 CDS NE0099 NC_004757.1 126918 128096 R hypothetical protein complement(126918..128096) Nitrosomonas europaea ATCC 19718 1081002 NP_840201.1 CDS NE0100 NC_004757.1 128125 129399 R general substrate transporters complement(128125..129399) Nitrosomonas europaea ATCC 19718 1081003 NP_840202.1 CDS hprA NC_004757.1 129566 130534 R Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; glycerate dehydrogenase complement(129566..130534) Nitrosomonas europaea ATCC 19718 1081004 NP_840203.1 CDS cyt_c552 NC_004757.1 130750 131064 R Timkovich,R.,et al. Biophys. J. 75 (4), 1964-1972 (1998)show the protein precursor begins with the 2nd Met. The mature protein begins at residue 23 (DADL...).; cytochrome c-552 complement(130750..131064) Nitrosomonas europaea ATCC 19718 1081006 NP_840204.1 CDS yyaL NC_004757.1 131085 133154 R hypothetical protein complement(131085..133154) Nitrosomonas europaea ATCC 19718 1081007 NP_840205.1 CDS NE0104 NC_004757.1 133176 134849 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(133176..134849) Nitrosomonas europaea ATCC 19718 1081008 NP_840206.1 CDS lgt NC_004757.1 134976 135812 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 134976..135812 Nitrosomonas europaea ATCC 19718 1081009 NP_840207.1 CDS NE0106 NC_004757.1 135832 136992 D Domain of unknown function DUF140; ABC transporter permease 135832..136992 Nitrosomonas europaea ATCC 19718 1081010 NP_840208.1 CDS NE0107 NC_004757.1 136992 137771 D ABC transporter ATPase 136992..137771 Nitrosomonas europaea ATCC 19718 1081011 NP_840209.1 CDS dapE NC_004757.1 137822 138952 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 137822..138952 Nitrosomonas europaea ATCC 19718 1081012 NP_840210.1 CDS NE0109 NC_004757.1 138991 139434 R hypothetical protein complement(138991..139434) Nitrosomonas europaea ATCC 19718 1081015 NP_840211.1 CDS NE0110 NC_004757.1 140382 140699 R hypothetical protein complement(140382..140699) Nitrosomonas europaea ATCC 19718 1081016 NP_840212.1 CDS NE0111 NC_004757.1 140733 141716 R hypothetical protein complement(140733..141716) Nitrosomonas europaea ATCC 19718 1081017 NP_840213.1 CDS NE0112 NC_004757.1 141738 142079 R hypothetical protein complement(141738..142079) Nitrosomonas europaea ATCC 19718 1081018 NP_840214.1 CDS NE0113 NC_004757.1 142114 143238 R hypothetical protein complement(142114..143238) Nitrosomonas europaea ATCC 19718 1081019 NP_840215.1 CDS NE0114 NC_004757.1 143213 143479 R hypothetical protein complement(143213..143479) Nitrosomonas europaea ATCC 19718 1081020 NP_840216.1 CDS NE0115 NC_004757.1 143736 144902 R hypothetical protein complement(143736..144902) Nitrosomonas europaea ATCC 19718 1081021 NP_840217.1 CDS NE0116 NC_004757.1 144899 145195 R hypothetical protein complement(144899..145195) Nitrosomonas europaea ATCC 19718 1081022 NP_840218.1 CDS NE0117 NC_004757.1 145192 146148 R hypothetical protein complement(145192..146148) Nitrosomonas europaea ATCC 19718 1081023 NP_840219.1 CDS NE0118 NC_004757.1 146126 146389 R hypothetical protein complement(146126..146389) Nitrosomonas europaea ATCC 19718 1081024 NP_840220.1 CDS NE0119 NC_004757.1 146417 148159 R hypothetical protein complement(146417..148159) Nitrosomonas europaea ATCC 19718 1081025 NP_840221.1 CDS NE0120 NC_004757.1 148159 149109 R hypothetical protein complement(148159..149109) Nitrosomonas europaea ATCC 19718 1081026 NP_840222.1 CDS NE0121 NC_004757.1 149114 149830 R hypothetical protein complement(149114..149830) Nitrosomonas europaea ATCC 19718 1081027 NP_840223.1 CDS NE0122 NC_004757.1 149894 150280 R hypothetical protein complement(149894..150280) Nitrosomonas europaea ATCC 19718 1081028 NP_840224.1 CDS NE0123 NC_004757.1 150363 152915 R hypothetical protein complement(150363..152915) Nitrosomonas europaea ATCC 19718 1081029 NP_840225.1 CDS NE0127 NC_004757.1 155926 156975 R transmembrane sensor complement(155926..156975) Nitrosomonas europaea ATCC 19718 1081033 NP_840226.1 CDS NE0128 NC_004757.1 156976 157509 R ECF subfamily RNA polymerase sigma-70 factor complement(156976..157509) Nitrosomonas europaea ATCC 19718 1081034 NP_840227.1 CDS NE0129 NC_004757.1 158035 158355 R lipoprotein complement(158035..158355) Nitrosomonas europaea ATCC 19718 1081035 NP_840228.1 CDS NE0130 NC_004757.1 158470 158742 R hypothetical protein complement(158470..158742) Nitrosomonas europaea ATCC 19718 1081036 NP_840229.1 CDS NE0131 NC_004757.1 158894 159049 R hypothetical protein complement(158894..159049) Nitrosomonas europaea ATCC 19718 1081037 NP_840230.1 CDS osmY NC_004757.1 159065 159421 R osmotically inducible protein Y complement(159065..159421) Nitrosomonas europaea ATCC 19718 1081038 NP_840231.1 CDS NE0134 NC_004757.1 160713 161684 R transposase complement(160713..161684) Nitrosomonas europaea ATCC 19718 1081040 NP_840232.1 CDS NE0136 NC_004757.1 162614 162961 R hypothetical protein complement(162614..162961) Nitrosomonas europaea ATCC 19718 1081042 NP_840233.1 CDS NE0137 NC_004757.1 163156 163812 D hypothetical protein 163156..163812 Nitrosomonas europaea ATCC 19718 1081043 NP_840234.1 CDS NE0138 NC_004757.1 163839 164627 R metallo-beta-lactamase superfamily protein complement(163839..164627) Nitrosomonas europaea ATCC 19718 1081044 NP_840235.1 CDS NE0139 NC_004757.1 164687 165523 D Generic methyl-transferase 164687..165523 Nitrosomonas europaea ATCC 19718 1081045 NP_840236.1 CDS rnhA NC_004757.1 165523 166008 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 165523..166008 Nitrosomonas europaea ATCC 19718 1081046 NP_840237.1 CDS dnaQ NC_004757.1 166020 166718 D DNA polymerase III subunit epsilon 166020..166718 Nitrosomonas europaea ATCC 19718 1081047 NP_840238.1 CDS NE0142 NC_004757.1 166868 168253 R aminotransferase protein complement(166868..168253) Nitrosomonas europaea ATCC 19718 1081049 NP_840239.1 CDS NE0143 NC_004757.1 168686 169096 D Chain A, Red Copper Protein Nitrosocyanin From Nitrosomonas Europaea pdb|1IBY|B Chain B, Red Copper Protein Nitrosocyanin From Nitrosomonas Europaea pdb|1IBY|C Chain C, Red Copper Protein Nitrosocyanin From Nitrosomonas; red copper protein nitrosocyanin subunit A 168686..169096 Nitrosomonas europaea ATCC 19718 1081050 NP_840240.1 CDS ndk NC_004757.1 169380 169805 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 169380..169805 Nitrosomonas europaea ATCC 19718 1081051 NP_840241.1 CDS NE0145 NC_004757.1 169899 170984 D hypothetical protein 169899..170984 Nitrosomonas europaea ATCC 19718 1081052 NP_840242.1 CDS pilF NC_004757.1 171028 171819 D hypothetical protein 171028..171819 Nitrosomonas europaea ATCC 19718 1081053 NP_840243.1 CDS NE0147 NC_004757.1 171809 172873 D hypothetical protein 171809..172873 Nitrosomonas europaea ATCC 19718 1081054 NP_840244.1 CDS NE0148 NC_004757.1 172908 173564 D 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 172908..173564 Nitrosomonas europaea ATCC 19718 1081055 NP_840245.1 CDS NE0149 NC_004757.1 173528 174160 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 173528..174160 Nitrosomonas europaea ATCC 19718 1081058 NP_840246.2 CDS hisS NC_004757.1 174153 175415 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 174153..175415 Nitrosomonas europaea ATCC 19718 1081060 NP_840247.1 CDS NE0151 NC_004757.1 175437 176081 D hypothetical protein 175437..176081 Nitrosomonas europaea ATCC 19718 1081063 NP_840248.1 CDS NE0152 NC_004757.1 176078 177310 D PQQ repeat-containing protein 176078..177310 Nitrosomonas europaea ATCC 19718 1081065 NP_840249.1 CDS engA NC_004757.1 177362 178765 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 177362..178765 Nitrosomonas europaea ATCC 19718 1081073 NP_840250.1 CDS tISRso8a NC_004757.1 178919 179221 D transposase IS911 178919..179221 Nitrosomonas europaea ATCC 19718 1081075 NP_840251.1 CDS NE0155 NC_004757.1 179188 180093 D integrase catalytic subunit 179188..180093 Nitrosomonas europaea ATCC 19718 1081076 NP_840252.1 CDS mexE NC_004757.1 180654 181820 D hemolysin D 180654..181820 Nitrosomonas europaea ATCC 19718 1081077 NP_840253.1 CDS NE0157 NC_004757.1 181846 184992 D transmembrane multidrug-efflux system lipoprotein transmembrane 181846..184992 Nitrosomonas europaea ATCC 19718 1081079 NP_840254.1 CDS NE0158 NC_004757.1 185073 186245 R hemolysin-type secretion transmembrane protein complement(185073..186245) Nitrosomonas europaea ATCC 19718 1081080 NP_840255.1 CDS NE0159 NC_004757.1 186242 188452 R ABC transporter ATP-binding protein/permease complement(186242..188452) Nitrosomonas europaea ATCC 19718 1081081 NP_840256.1 CDS NE0160 NC_004757.1 188445 189821 R Outer membrane efflux protein complement(188445..189821) Nitrosomonas europaea ATCC 19718 1081082 NP_840257.1 CDS NE0161 NC_004757.1 189847 199041 R hemolysin-type calcium-binding domain-containing protein complement(189847..199041) Nitrosomonas europaea ATCC 19718 1081084 NP_840258.1 CDS NE0162 NC_004757.1 199541 200584 R integrase catalytic subunit complement(199541..200584) Nitrosomonas europaea ATCC 19718 1081089 NP_840259.1 CDS NE0165 NC_004757.1 201864 202298 D hypothetical protein 201864..202298 Nitrosomonas europaea ATCC 19718 1081092 NP_840260.1 CDS NE0166 NC_004757.1 202559 202885 D hypothetical protein 202559..202885 Nitrosomonas europaea ATCC 19718 1081093 NP_840261.1 CDS NE0167 NC_004757.1 202941 203228 R hypothetical protein complement(202941..203228) Nitrosomonas europaea ATCC 19718 1081094 NP_840262.1 CDS NE0168 NC_004757.1 203218 206412 R multidrug resistance protein MexB complement(203218..206412) Nitrosomonas europaea ATCC 19718 1081095 NP_840263.1 CDS acrA NC_004757.1 206448 207647 R hemolysin D complement(206448..207647) Nitrosomonas europaea ATCC 19718 1081096 NP_840264.1 CDS oprM NC_004757.1 207747 209297 R Outer membrane efflux protein complement(207747..209297) Nitrosomonas europaea ATCC 19718 1081097 NP_840265.1 CDS NE0171 NC_004757.1 209584 210651 R hypothetical protein complement(209584..210651) Nitrosomonas europaea ATCC 19718 1081098 NP_840266.1 CDS pnp NC_004757.1 210838 212964 R polynucleotide phosphorylase/polyadenylase complement(210838..212964) Nitrosomonas europaea ATCC 19718 1081099 NP_840267.1 CDS rpsO NC_004757.1 213159 213428 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(213159..213428) Nitrosomonas europaea ATCC 19718 1081100 NP_840268.1 CDS NE0174 NC_004757.1 213761 214957 D aminotransferase class-V 213761..214957 Nitrosomonas europaea ATCC 19718 1081101 NP_840269.1 CDS NE0175 NC_004757.1 214993 215808 D ADP-glucose pyrophosphorylase 214993..215808 Nitrosomonas europaea ATCC 19718 1081102 NP_840270.1 CDS NE0176 NC_004757.1 215824 216273 D hypothetical protein 215824..216273 Nitrosomonas europaea ATCC 19718 1081103 NP_840271.1 CDS NE0177 NC_004757.1 216287 217348 D Fatty acid desaturase, type 2 216287..217348 Nitrosomonas europaea ATCC 19718 1081104 NP_840272.1 CDS gpmA NC_004757.1 217395 218099 D phosphoglycerate mutase family protein 217395..218099 Nitrosomonas europaea ATCC 19718 1081105 NP_840273.1 CDS NE0179 NC_004757.1 218149 218835 R hypothetical protein complement(218149..218835) Nitrosomonas europaea ATCC 19718 1081106 NP_840274.1 CDS serS NC_004757.1 218882 220195 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(218882..220195) Nitrosomonas europaea ATCC 19718 1081107 NP_840275.1 CDS apt NC_004757.1 220411 220935 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(220411..220935) Nitrosomonas europaea ATCC 19718 1081108 NP_840276.1 CDS NE0182 NC_004757.1 221025 221456 R hypothetical protein complement(221025..221456) Nitrosomonas europaea ATCC 19718 1081109 NP_840277.1 CDS NE0183 NC_004757.1 221653 222264 R hypothetical protein complement(221653..222264) Nitrosomonas europaea ATCC 19718 1081110 NP_840278.1 CDS NE0184 NC_004757.1 222534 222983 R NUDIX hydrolase complement(222534..222983) Nitrosomonas europaea ATCC 19718 1081111 NP_840279.1 CDS NE0185 NC_004757.1 223820 224545 D glycosyl transferase family protein 223820..224545 Nitrosomonas europaea ATCC 19718 1081112 NP_840280.1 CDS NE0186 NC_004757.1 224625 224909 R hypothetical protein complement(224625..224909) Nitrosomonas europaea ATCC 19718 1081113 NP_840281.1 CDS NE0187 NC_004757.1 225360 226346 D hypothetical protein 225360..226346 Nitrosomonas europaea ATCC 19718 1081114 NP_840282.1 CDS NE0188 NC_004757.1 226510 227553 D integrase catalytic subunit 226510..227553 Nitrosomonas europaea ATCC 19718 1081115 NP_840283.1 CDS NE0189 NC_004757.1 227840 228148 R helix-hairpin-helix DNA-binding motif-containing protein complement(227840..228148) Nitrosomonas europaea ATCC 19718 1081116 NP_840284.1 CDS NE0190 NC_004757.1 228266 228985 R ADP-glucose pyrophosphorylase complement(228266..228985) Nitrosomonas europaea ATCC 19718 1081117 NP_840285.1 CDS NE0191 NC_004757.1 229013 230011 R hypothetical protein complement(229013..230011) Nitrosomonas europaea ATCC 19718 1081118 NP_840286.1 CDS NE0192 NC_004757.1 230167 230463 D hypothetical protein 230167..230463 Nitrosomonas europaea ATCC 19718 1081119 NP_840287.1 CDS NE0193 NC_004757.1 230541 232043 D Mg(2+) chelatase family protein 230541..232043 Nitrosomonas europaea ATCC 19718 1081120 NP_840288.1 CDS dnaB NC_004757.1 232072 233469 R dnaB; replicative DNA helicase protein complement(232072..233469) Nitrosomonas europaea ATCC 19718 1081121 NP_840289.1 CDS rplI NC_004757.1 233577 234032 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(233577..234032) Nitrosomonas europaea ATCC 19718 1081122 NP_840290.1 CDS rpsR NC_004757.1 234051 234329 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(234051..234329) Nitrosomonas europaea ATCC 19718 1081123 NP_840291.1 CDS NE0197 NC_004757.1 234366 234692 R weak blast hit to gi|16123684|ref|NP_406997.1| (NC_003143) primosomal replication protein n [Yersinia pestis] Score = 47.0 bits (110), Expect = 3e-05 Identities = 30/102 (29%); hypothetical protein complement(234366..234692) Nitrosomonas europaea ATCC 19718 1081124 NP_840292.1 CDS rpsF NC_004757.1 234676 235116 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(234676..235116) Nitrosomonas europaea ATCC 19718 1081125 NP_840293.1 CDS NE0199 NC_004757.1 235507 235884 D hypothetical protein 235507..235884 Nitrosomonas europaea ATCC 19718 1081126 NP_840294.1 CDS atpB NC_004757.1 235919 236728 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 235919..236728 Nitrosomonas europaea ATCC 19718 1081127 NP_840295.1 CDS atpE NC_004757.1 236771 237043 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 236771..237043 Nitrosomonas europaea ATCC 19718 1081128 NP_840296.1 CDS atpF NC_004757.1 237090 237563 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 237090..237563 Nitrosomonas europaea ATCC 19718 1081129 NP_840297.1 CDS atpH NC_004757.1 237564 238100 D ATP synthase subunit delta (OSCP) 237564..238100 Nitrosomonas europaea ATCC 19718 1081130 NP_840298.1 CDS atpA NC_004757.1 238113 239654 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 238113..239654 Nitrosomonas europaea ATCC 19718 1081131 NP_840299.1 CDS atpG NC_004757.1 239658 240542 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 239658..240542 Nitrosomonas europaea ATCC 19718 1081132 NP_840300.1 CDS atpD NC_004757.1 240573 241955 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 240573..241955 Nitrosomonas europaea ATCC 19718 1081133 NP_840301.1 CDS atpC NC_004757.1 241984 242406 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 241984..242406 Nitrosomonas europaea ATCC 19718 1081134 NP_840302.1 CDS glmU NC_004757.1 242652 244028 D glmU; UDP-N-acetylglucosamine pyrophosphorylase protein 242652..244028 Nitrosomonas europaea ATCC 19718 1081135 NP_840303.1 CDS glmS NC_004757.1 244066 245913 D glutamine amidotransferase 244066..245913 Nitrosomonas europaea ATCC 19718 1081136 NP_840304.1 CDS NE0210 NC_004757.1 246049 246774 D hypothetical protein 246049..246774 Nitrosomonas europaea ATCC 19718 1081137 NP_840305.1 CDS ruvC NC_004757.1 246771 247316 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 246771..247316 Nitrosomonas europaea ATCC 19718 1081138 NP_840306.1 CDS ruvA NC_004757.1 247313 247900 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 247313..247900 Nitrosomonas europaea ATCC 19718 1081139 NP_840307.1 CDS ruvB NC_004757.1 247919 248959 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 247919..248959 Nitrosomonas europaea ATCC 19718 1081140 NP_840308.1 CDS NE0214 NC_004757.1 249019 249429 D 4-hydroxybenzoyl-CoA thioesterase 249019..249429 Nitrosomonas europaea ATCC 19718 1081141 NP_840309.1 CDS tolQ NC_004757.1 249426 250130 D MotA/TolQ/ExbB proton channel family protein 249426..250130 Nitrosomonas europaea ATCC 19718 1081142 NP_840310.1 CDS tolR NC_004757.1 250127 250543 D biopolymer transport protein ExbD/TolR 250127..250543 Nitrosomonas europaea ATCC 19718 1081143 NP_840311.1 CDS tolA NC_004757.1 250565 251425 D hypothetical protein 250565..251425 Nitrosomonas europaea ATCC 19718 1081144 NP_840312.1 CDS tolB NC_004757.1 251463 252740 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 251463..252740 Nitrosomonas europaea ATCC 19718 1081145 NP_840313.1 CDS pal NC_004757.1 252794 253309 D outer membrane protein 252794..253309 Nitrosomonas europaea ATCC 19718 1081146 NP_840314.1 CDS NE0220 NC_004757.1 253309 254136 D hypothetical protein 253309..254136 Nitrosomonas europaea ATCC 19718 1081147 NP_840315.1 CDS NE0221 NC_004757.1 254239 254874 D radical activating enzyme 254239..254874 Nitrosomonas europaea ATCC 19718 1081148 NP_840316.1 CDS NE0222 NC_004757.1 254896 255582 D ExsB protein 254896..255582 Nitrosomonas europaea ATCC 19718 1081149 NP_840317.1 CDS NE0223 NC_004757.1 255613 255966 R dihydroneopterin aldolase complement(255613..255966) Nitrosomonas europaea ATCC 19718 1081150 NP_840318.1 CDS NE0224 NC_004757.1 256051 256653 D hypothetical protein 256051..256653 Nitrosomonas europaea ATCC 19718 1081151 NP_840319.1 CDS gcp NC_004757.1 256662 257675 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(256662..257675) Nitrosomonas europaea ATCC 19718 1081152 NP_840320.1 CDS rpsU NC_004757.1 257934 258146 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 257934..258146 Nitrosomonas europaea ATCC 19718 1081153 NP_840321.1 CDS NE0227 NC_004757.1 258184 258630 D hypothetical protein 258184..258630 Nitrosomonas europaea ATCC 19718 1081154 NP_840322.1 CDS NE0228 NC_004757.1 258712 260514 D CHC2 zinc finger 258712..260514 Nitrosomonas europaea ATCC 19718 1081155 NP_840323.1 CDS rpoD NC_004757.1 260721 262976 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 260721..262976 Nitrosomonas europaea ATCC 19718 1081156 NP_840324.1 CDS NE0230 NC_004757.1 263504 263815 D hypothetical protein 263504..263815 Nitrosomonas europaea ATCC 19718 1081158 NP_840325.1 CDS NE0231 NC_004757.1 263808 264437 R hypothetical protein complement(263808..264437) Nitrosomonas europaea ATCC 19718 1081159 NP_840326.1 CDS NE0232 NC_004757.1 265780 267168 R hypothetical protein complement(265780..267168) Nitrosomonas europaea ATCC 19718 1081160 NP_840327.1 CDS NE0233 NC_004757.1 267165 268085 R TOPRIM domain-containing protein complement(267165..268085) Nitrosomonas europaea ATCC 19718 1081161 NP_840328.1 CDS NE0234 NC_004757.1 268394 268966 R hypothetical protein complement(268394..268966) Nitrosomonas europaea ATCC 19718 1081162 NP_840329.1 CDS intF NC_004757.1 268953 270203 R Phage integrase complement(268953..270203) Nitrosomonas europaea ATCC 19718 1081163 NP_840330.1 CDS ccrB NC_004757.1 270335 271894 R site-specific recombinase complement(270335..271894) Nitrosomonas europaea ATCC 19718 1081164 NP_840331.1 CDS NE0237 NC_004757.1 271908 272234 R hypothetical protein complement(271908..272234) Nitrosomonas europaea ATCC 19718 1081165 NP_840332.1 CDS NE0238 NC_004757.1 272567 273130 R hypothetical protein complement(272567..273130) Nitrosomonas europaea ATCC 19718 1081166 NP_840333.1 CDS NE0239 NC_004757.1 273266 274309 D integrase catalytic subunit 273266..274309 Nitrosomonas europaea ATCC 19718 1081167 NP_840334.1 CDS NE0240 NC_004757.1 274352 277450 R hypothetical protein complement(274352..277450) Nitrosomonas europaea ATCC 19718 1081168 NP_840335.1 CDS NE0241 NC_004757.1 277612 277908 R hypothetical protein complement(277612..277908) Nitrosomonas europaea ATCC 19718 1081169 NP_840336.1 CDS NE0242 NC_004757.1 278147 278509 D hypothetical protein 278147..278509 Nitrosomonas europaea ATCC 19718 1081170 NP_840337.1 CDS NE0243 NC_004757.1 278643 279698 D hypothetical protein 278643..279698 Nitrosomonas europaea ATCC 19718 1081171 NP_840338.1 CDS NE0244 NC_004757.1 280152 281465 R integrase catalytic subunit complement(280152..281465) Nitrosomonas europaea ATCC 19718 1081172 NP_840339.1 CDS NE0245 NC_004757.1 281568 282023 D hypothetical protein 281568..282023 Nitrosomonas europaea ATCC 19718 1081173 NP_840340.1 CDS NE0246 NC_004757.1 282027 283664 D TRAG protein 282027..283664 Nitrosomonas europaea ATCC 19718 1081174 NP_840341.1 CDS NE0251 NC_004757.1 285943 287463 D hypothetical protein 285943..287463 Nitrosomonas europaea ATCC 19718 1081179 NP_840342.1 CDS NE0252 NC_004757.1 287757 288080 D transposase IS911 287757..288080 Nitrosomonas europaea ATCC 19718 1081180 NP_840343.1 CDS NE0253 NC_004757.1 288134 288985 D integrase catalytic subunit 288134..288985 Nitrosomonas europaea ATCC 19718 1081181 NP_840344.1 CDS NE0254 NC_004757.1 289300 290343 R integrase catalytic subunit complement(289300..290343) Nitrosomonas europaea ATCC 19718 1081182 NP_840345.1 CDS NE0255 NC_004757.1 290453 291271 R hypothetical protein complement(290453..291271) Nitrosomonas europaea ATCC 19718 1081183 NP_840346.1 CDS NE0256 NC_004757.1 291347 292789 R hypothetical protein complement(291347..292789) Nitrosomonas europaea ATCC 19718 1081184 NP_840347.1 CDS NE0257 NC_004757.1 293167 293799 R site-specific recombinase complement(293167..293799) Nitrosomonas europaea ATCC 19718 1081185 NP_840348.1 CDS NE0258 NC_004757.1 294019 294411 D hypothetical protein 294019..294411 Nitrosomonas europaea ATCC 19718 1081186 NP_840349.1 CDS NE0259 NC_004757.1 294413 295210 R hypothetical protein complement(294413..295210) Nitrosomonas europaea ATCC 19718 1081187 NP_840350.1 CDS NE0260 NC_004757.1 295737 296252 D antirestriction protein 295737..296252 Nitrosomonas europaea ATCC 19718 1081188 NP_840351.1 CDS NE0261 NC_004757.1 296385 296678 R plasmid stabilization element ParE complement(296385..296678) Nitrosomonas europaea ATCC 19718 1081189 NP_840352.1 CDS NE0262 NC_004757.1 296679 296921 R hypothetical protein complement(296679..296921) Nitrosomonas europaea ATCC 19718 1081190 NP_840353.1 CDS NE0263 NC_004757.1 297181 297603 D ArsR family regulatory protein 297181..297603 Nitrosomonas europaea ATCC 19718 1081191 NP_840354.1 CDS NE0264 NC_004757.1 297584 298096 D hypothetical protein 297584..298096 Nitrosomonas europaea ATCC 19718 1081192 NP_840355.1 CDS NE0265 NC_004757.1 298118 298369 D hypothetical protein 298118..298369 Nitrosomonas europaea ATCC 19718 1081193 NP_840356.1 CDS NE0266 NC_004757.1 298392 298871 D hypothetical protein 298392..298871 Nitrosomonas europaea ATCC 19718 1081194 NP_840357.1 CDS NE0267 NC_004757.1 298950 299336 D hypothetical protein 298950..299336 Nitrosomonas europaea ATCC 19718 1081195 NP_840358.1 CDS NE0268 NC_004757.1 299643 300686 R integrase catalytic subunit complement(299643..300686) Nitrosomonas europaea ATCC 19718 1081196 NP_840359.1 CDS NE0270 NC_004757.1 302132 302503 R hypothetical protein complement(302132..302503) Nitrosomonas europaea ATCC 19718 1081198 NP_840360.1 CDS NE0271 NC_004757.1 302885 303253 R IS4 family transposase complement(302885..303253) Nitrosomonas europaea ATCC 19718 1081199 NP_840361.1 CDS NE0272 NC_004757.1 303253 303660 R transposase complement(303253..303660) Nitrosomonas europaea ATCC 19718 1081200 NP_840362.1 CDS cyc NC_004757.1 303853 304488 R cytochrome c, class IC:cytochrome c, class I complement(303853..304488) Nitrosomonas europaea ATCC 19718 1081201 NP_840363.1 CDS NE0274 NC_004757.1 304595 305197 D hypothetical protein 304595..305197 Nitrosomonas europaea ATCC 19718 1081202 NP_840364.1 CDS map NC_004757.1 305311 306129 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 305311..306129 Nitrosomonas europaea ATCC 19718 1081203 NP_840365.1 CDS rph NC_004757.1 306197 306922 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 306197..306922 Nitrosomonas europaea ATCC 19718 1081204 NP_840366.1 CDS NE0277 NC_004757.1 306960 307571 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 306960..307571 Nitrosomonas europaea ATCC 19718 1081205 NP_840367.1 CDS NE0278 NC_004757.1 307608 308807 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 307608..308807 Nitrosomonas europaea ATCC 19718 1081206 NP_840368.1 CDS pcoA NC_004757.1 308979 310820 D multicopper oxidase type 1 308979..310820 Nitrosomonas europaea ATCC 19718 1081207 NP_840369.1 CDS pcoB NC_004757.1 310817 311620 D copper resistance protein B 310817..311620 Nitrosomonas europaea ATCC 19718 1081208 NP_840370.1 CDS NE0281 NC_004757.1 311656 312597 R hypothetical protein complement(311656..312597) Nitrosomonas europaea ATCC 19718 1081209 NP_840371.1 CDS NE0282 NC_004757.1 312610 313188 R hypothetical protein complement(312610..313188) Nitrosomonas europaea ATCC 19718 1081210 NP_840372.1 CDS trmB NC_004757.1 313307 313981 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(313307..313981) Nitrosomonas europaea ATCC 19718 1081211 NP_840373.1 CDS thiG NC_004757.1 314010 314816 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(314010..314816) Nitrosomonas europaea ATCC 19718 1081212 NP_840374.1 CDS NE0285 NC_004757.1 314891 315091 R hypothetical protein complement(314891..315091) Nitrosomonas europaea ATCC 19718 1081213 NP_840375.1 CDS NE0286 NC_004757.1 315293 315781 D hypothetical protein 315293..315781 Nitrosomonas europaea ATCC 19718 1081214 NP_840376.1 CDS vapC NC_004757.1 315850 316254 R PilT domain-containing protein complement(315850..316254) Nitrosomonas europaea ATCC 19718 1081215 NP_840377.1 CDS NE0288 NC_004757.1 316357 317307 D integrase catalytic subunit 316357..317307 Nitrosomonas europaea ATCC 19718 1081216 NP_840378.1 CDS NE0289 NC_004757.1 317296 317502 R CopG family transcriptional regulator complement(317296..317502) Nitrosomonas europaea ATCC 19718 1081217 NP_840379.1 CDS NE0292 NC_004757.1 319812 320270 R hypothetical protein complement(319812..320270) Nitrosomonas europaea ATCC 19718 1081221 NP_840380.1 CDS NE0293 NC_004757.1 320270 320587 R hypothetical protein complement(320270..320587) Nitrosomonas europaea ATCC 19718 1081222 NP_840381.1 CDS NE0294 NC_004757.1 320869 322812 D cytochrome c, class I 320869..322812 Nitrosomonas europaea ATCC 19718 1081223 NP_840382.1 CDS NE0295 NC_004757.1 322928 323662 D hypothetical protein 322928..323662 Nitrosomonas europaea ATCC 19718 1081224 NP_840383.1 CDS NE0296 NC_004757.1 323659 325191 D hypothetical protein 323659..325191 Nitrosomonas europaea ATCC 19718 1081225 NP_840384.1 CDS NE0297 NC_004757.1 325196 326146 D hypothetical protein 325196..326146 Nitrosomonas europaea ATCC 19718 1081226 NP_840385.1 CDS pta NC_004757.1 326321 328408 R catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase complement(326321..328408) Nitrosomonas europaea ATCC 19718 1081227 NP_840386.1 CDS NE0299 NC_004757.1 328739 329794 R hypothetical protein complement(328739..329794) Nitrosomonas europaea ATCC 19718 1081228 NP_840387.1 CDS NE0300 NC_004757.1 329852 330493 R TetR family regulatory protein complement(329852..330493) Nitrosomonas europaea ATCC 19718 1081229 NP_840388.1 CDS flgA NC_004757.1 330635 331327 R required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA complement(330635..331327) Nitrosomonas europaea ATCC 19718 1081230 NP_840389.1 CDS flgB NC_004757.1 331550 331963 D flagella basal body rod protein 331550..331963 Nitrosomonas europaea ATCC 19718 1081231 NP_840390.1 CDS flgC NC_004757.1 331969 332373 D flagella basal body rod protein 331969..332373 Nitrosomonas europaea ATCC 19718 1081232 NP_840391.1 CDS flgD NC_004757.1 332390 333061 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 332390..333061 Nitrosomonas europaea ATCC 19718 1081233 NP_840392.1 CDS flgE NC_004757.1 333076 334308 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 333076..334308 Nitrosomonas europaea ATCC 19718 1081234 NP_840393.1 CDS flgF NC_004757.1 334348 335091 D FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 334348..335091 Nitrosomonas europaea ATCC 19718 1081235 NP_840394.1 CDS flgG NC_004757.1 335159 335941 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 335159..335941 Nitrosomonas europaea ATCC 19718 1081236 NP_840395.1 CDS flgH NC_004757.1 335979 336773 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein 335979..336773 Nitrosomonas europaea ATCC 19718 1081237 NP_840396.1 CDS flgI NC_004757.1 336795 337907 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 336795..337907 Nitrosomonas europaea ATCC 19718 1081238 NP_840397.1 CDS flgJ NC_004757.1 338080 339093 D mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 338080..339093 Nitrosomonas europaea ATCC 19718 1081239 NP_840398.1 CDS flgK NC_004757.1 339275 340675 D flagella basal body rod protein 339275..340675 Nitrosomonas europaea ATCC 19718 1081240 NP_840399.1 CDS flgL NC_004757.1 340704 341603 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella; flagellar hook-associated protein FlgL 340704..341603 Nitrosomonas europaea ATCC 19718 1081241 NP_840400.1 CDS NE0313 NC_004757.1 341681 342325 D hypothetical protein 341681..342325 Nitrosomonas europaea ATCC 19718 1081242 NP_840401.1 CDS NE0314 NC_004757.1 342677 343333 D hypothetical protein 342677..343333 Nitrosomonas europaea ATCC 19718 1081243 NP_840402.1 CDS mnxG NC_004757.1 343351 349011 D multicopper oxidase 343351..349011 Nitrosomonas europaea ATCC 19718 1081244 NP_840403.1 CDS NE0316 NC_004757.1 349079 350209 R hypothetical protein complement(349079..350209) Nitrosomonas europaea ATCC 19718 1081245 NP_840404.1 CDS NE0317 NC_004757.1 350349 351092 R response regulator complement(350349..351092) Nitrosomonas europaea ATCC 19718 1081246 NP_840405.1 CDS NE0318 NC_004757.1 351852 352649 D hypothetical protein 351852..352649 Nitrosomonas europaea ATCC 19718 1081247 NP_840406.1 CDS NE0319 NC_004757.1 352869 353432 D hypothetical protein 352869..353432 Nitrosomonas europaea ATCC 19718 1081248 NP_840407.1 CDS NE0320 NC_004757.1 353453 353983 D N-acetyltransferase GCN5 353453..353983 Nitrosomonas europaea ATCC 19718 1081249 NP_840408.1 CDS NE0321 NC_004757.1 354186 356378 D TonB-dependent receptor protein 354186..356378 Nitrosomonas europaea ATCC 19718 1081250 NP_840409.1 CDS NE0322 NC_004757.1 356743 357015 D hypothetical protein 356743..357015 Nitrosomonas europaea ATCC 19718 1081251 NP_840410.1 CDS NE0323 NC_004757.1 357104 359209 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 357104..359209 Nitrosomonas europaea ATCC 19718 1081252 NP_840411.1 CDS cbbA NC_004757.1 359298 360362 R class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase complement(359298..360362) Nitrosomonas europaea ATCC 19718 1081253 NP_840412.1 CDS pykA1 NC_004757.1 360561 362051 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(360561..362051) Nitrosomonas europaea ATCC 19718 1081254 NP_840413.1 CDS pgk NC_004757.1 362086 363264 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(362086..363264) Nitrosomonas europaea ATCC 19718 1081255 NP_840414.1 CDS cbbG NC_004757.1 363571 364572 R glyceraldehyde 3-phosphate dehydrogenase complement(363571..364572) Nitrosomonas europaea ATCC 19718 1081256 NP_840415.1 CDS cbbT NC_004757.1 364636 366654 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(364636..366654) Nitrosomonas europaea ATCC 19718 1081257 NP_840416.1 CDS NE0329 NC_004757.1 367095 368258 D MoaA/nifB/pqqE family protein 367095..368258 Nitrosomonas europaea ATCC 19718 1081259 NP_840417.1 CDS NE0330 NC_004757.1 368308 369438 D glycosyl transferase family protein 368308..369438 Nitrosomonas europaea ATCC 19718 1081260 NP_840418.1 CDS NE0331 NC_004757.1 369467 370048 D periplasmic transport protein 369467..370048 Nitrosomonas europaea ATCC 19718 1081261 NP_840419.1 CDS gyrA NC_004757.1 370118 372664 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 370118..372664 Nitrosomonas europaea ATCC 19718 1081262 NP_840420.1 CDS serC NC_004757.1 372682 373788 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 372682..373788 Nitrosomonas europaea ATCC 19718 1081263 NP_840421.1 CDS NE0334 NC_004757.1 373781 374992 D D-isomer specific 2-hydroxyacid dehydrogenase 373781..374992 Nitrosomonas europaea ATCC 19718 1081264 NP_840422.1 CDS pheA NC_004757.1 375031 376098 D prephenate dehydratase/chorismate mutase 375031..376098 Nitrosomonas europaea ATCC 19718 1081265 NP_840423.1 CDS hisC2 NC_004757.1 376139 377260 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 376139..377260 Nitrosomonas europaea ATCC 19718 1081266 NP_840424.1 CDS tyrA NC_004757.1 377283 378185 D prephenate dehydrogenase 377283..378185 Nitrosomonas europaea ATCC 19718 1081267 NP_840425.1 CDS sss NC_004757.1 378223 379188 R phage integrase domain/SAM domain-containing protein complement(378223..379188) Nitrosomonas europaea ATCC 19718 1081268 NP_840426.1 CDS NE0339 NC_004757.1 379172 379885 R hypothetical protein complement(379172..379885) Nitrosomonas europaea ATCC 19718 1081269 NP_840427.1 CDS NE0340 NC_004757.1 379941 380891 R integrase catalytic subunit complement(379941..380891) Nitrosomonas europaea ATCC 19718 1081270 NP_840428.1 CDS NE0341 NC_004757.1 380952 381320 R IS4 family transposase complement(380952..381320) Nitrosomonas europaea ATCC 19718 1081271 NP_840429.1 CDS NE0342 NC_004757.1 381289 381726 R transposase complement(381289..381726) Nitrosomonas europaea ATCC 19718 1081272 NP_840430.1 CDS NE0343 NC_004757.1 382383 383768 R sensory transduction histidine kinase complement(382383..383768) Nitrosomonas europaea ATCC 19718 1081273 NP_840431.1 CDS tctD NC_004757.1 383765 384436 R response regulator complement(383765..384436) Nitrosomonas europaea ATCC 19718 1081274 NP_840432.1 CDS NE0345 NC_004757.1 384524 387652 R acriflavin resistance protein:heavy metal efflux pump CzcA complement(384524..387652) Nitrosomonas europaea ATCC 19718 1081275 NP_840433.1 CDS NE0346 NC_004757.1 387654 388835 R cation transporter transmembrane protein complement(387654..388835) Nitrosomonas europaea ATCC 19718 1081276 NP_840434.1 CDS speE NC_004757.1 389130 390107 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(389130..390107) Nitrosomonas europaea ATCC 19718 1081277 NP_840435.1 CDS NE0348 NC_004757.1 390104 390544 R hypothetical protein complement(390104..390544) Nitrosomonas europaea ATCC 19718 1081278 NP_840436.1 CDS NE0349 NC_004757.1 390828 391859 R hypothetical protein complement(390828..391859) Nitrosomonas europaea ATCC 19718 1081279 NP_840437.1 CDS rnr NC_004757.1 392344 394545 D rnr; exoribonuclease RNAse R (vacB protein) 392344..394545 Nitrosomonas europaea ATCC 19718 1081281 NP_840438.1 CDS NE0351 NC_004757.1 394569 395351 D tRNA/rRNA methyltransferase 394569..395351 Nitrosomonas europaea ATCC 19718 1081282 NP_840439.1 CDS exbD1 NC_004757.1 395460 395888 R biopolymer transport protein ExbD/TolR complement(395460..395888) Nitrosomonas europaea ATCC 19718 1081283 NP_840440.1 CDS exbB1 NC_004757.1 395888 396688 R MotA/TolQ/ExbB proton channel family protein complement(395888..396688) Nitrosomonas europaea ATCC 19718 1081284 NP_840441.1 CDS NE0354 NC_004757.1 396689 397408 R TonB protein complement(396689..397408) Nitrosomonas europaea ATCC 19718 1081285 NP_840442.1 CDS cafA NC_004757.1 397628 399073 R ribonuclease E/G complement(397628..399073) Nitrosomonas europaea ATCC 19718 1081286 NP_840443.1 CDS NE0356 NC_004757.1 399111 399734 R Maf-like protein complement(399111..399734) Nitrosomonas europaea ATCC 19718 1081287 NP_840444.1 CDS NE0357 NC_004757.1 399820 400290 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(399820..400290) Nitrosomonas europaea ATCC 19718 1081288 NP_840445.1 CDS NE0358 NC_004757.1 400387 400752 R hypothetical protein complement(400387..400752) Nitrosomonas europaea ATCC 19718 1081289 NP_840446.1 CDS nadD NC_004757.1 400749 401432 R cytidylyltransferase complement(400749..401432) Nitrosomonas europaea ATCC 19718 1081290 NP_840447.1 CDS aceF NC_004757.1 401482 402843 R branched-chain alpha-keto acid dehydrogenase subunit E2 complement(401482..402843) Nitrosomonas europaea ATCC 19718 1081291 NP_840448.1 CDS aceE NC_004757.1 402913 405570 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(402913..405570) Nitrosomonas europaea ATCC 19718 1081292 NP_840449.1 CDS folD NC_004757.1 405604 406491 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(405604..406491) Nitrosomonas europaea ATCC 19718 1081293 NP_840450.1 CDS NE0363 NC_004757.1 406644 407303 R hypothetical protein complement(406644..407303) Nitrosomonas europaea ATCC 19718 1081294 NP_840451.1 CDS argS NC_004757.1 407590 409350 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 407590..409350 Nitrosomonas europaea ATCC 19718 1081295 NP_840452.1 CDS NE0365 NC_004757.1 409374 410021 D hypothetical protein 409374..410021 Nitrosomonas europaea ATCC 19718 1081296 NP_840453.1 CDS dsbA NC_004757.1 410162 410812 D thioredoxin:DSBA oxidoreductase 410162..410812 Nitrosomonas europaea ATCC 19718 1081297 NP_840454.1 CDS NE0367 NC_004757.1 410825 411508 R hypothetical protein complement(410825..411508) Nitrosomonas europaea ATCC 19718 1081298 NP_840455.1 CDS spoT NC_004757.1 411527 413692 R p)ppGpp synthetase I SpoT complement(411527..413692) Nitrosomonas europaea ATCC 19718 1081299 NP_840456.1 CDS NE0369 NC_004757.1 414532 414894 D hypothetical protein 414532..414894 Nitrosomonas europaea ATCC 19718 1081301 NP_840457.1 CDS eryB NC_004757.1 414982 416157 R NAD binding site:D-amino acid oxidase complement(414982..416157) Nitrosomonas europaea ATCC 19718 1081302 NP_840458.1 CDS NE0371 NC_004757.1 416165 416899 R glycerophosphoryl diester phosphodiesterase complement(416165..416899) Nitrosomonas europaea ATCC 19718 1081303 NP_840459.1 CDS NE0372 NC_004757.1 417013 417669 D hypothetical protein 417013..417669 Nitrosomonas europaea ATCC 19718 1081304 NP_840460.1 CDS NE0373 NC_004757.1 417711 418967 D Outer membrane efflux protein 417711..418967 Nitrosomonas europaea ATCC 19718 1081305 NP_840461.1 CDS NE0374 NC_004757.1 418977 420140 D cation efflux protein 418977..420140 Nitrosomonas europaea ATCC 19718 1081306 NP_840462.1 CDS NE0375 NC_004757.1 420140 423244 D acriflavin resistance protein:heavy metal efflux pump CzcA 420140..423244 Nitrosomonas europaea ATCC 19718 1081307 NP_840463.1 CDS NE0376 NC_004757.1 423285 425162 R ABC transporter ATP-binding protein/permease complement(423285..425162) Nitrosomonas europaea ATCC 19718 1081308 NP_840464.1 CDS NE0377 NC_004757.1 425394 427445 R sensory transduction histidine kinase complement(425394..427445) Nitrosomonas europaea ATCC 19718 1081309 NP_840465.1 CDS NE0378 NC_004757.1 427483 428772 R sugar transferase complement(427483..428772) Nitrosomonas europaea ATCC 19718 1081310 NP_840466.1 CDS mucD NC_004757.1 428969 429808 R serine protease complement(428969..429808) Nitrosomonas europaea ATCC 19718 1081311 NP_840467.1 CDS NE0380 NC_004757.1 430161 431546 D Iron-sulfur-dependent L-serine dehydratase single chain form 430161..431546 Nitrosomonas europaea ATCC 19718 1081313 NP_840468.1 CDS NE0381 NC_004757.1 431853 432797 D hypothetical protein 431853..432797 Nitrosomonas europaea ATCC 19718 1081314 NP_840469.1 CDS hsdR NC_004757.1 432929 436078 R restriction enzyme type I helicase subunits and related helicases complement(432929..436078) Nitrosomonas europaea ATCC 19718 1081315 NP_840470.1 CDS NE0383 NC_004757.1 436075 437568 R hypothetical protein complement(436075..437568) Nitrosomonas europaea ATCC 19718 1081316 NP_840471.1 CDS NE0384 NC_004757.1 437565 438905 R restriction modification system, type I complement(437565..438905) Nitrosomonas europaea ATCC 19718 1081317 NP_840472.1 CDS hsdM NC_004757.1 438895 440610 R hsdM; site-specific DNA-methyltransferase, type I modification complement(438895..440610) Nitrosomonas europaea ATCC 19718 1081318 NP_840473.1 CDS trmE NC_004757.1 440772 442127 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(440772..442127) Nitrosomonas europaea ATCC 19718 1081319 NP_840474.1 CDS NE0387 NC_004757.1 442186 444030 R hypothetical protein complement(442186..444030) Nitrosomonas europaea ATCC 19718 1081320 NP_840475.1 CDS NE0388 NC_004757.1 444123 444332 R hypothetical protein complement(444123..444332) Nitrosomonas europaea ATCC 19718 1081321 NP_840476.1 CDS rnpA NC_004757.1 444329 444688 R ribonuclease P protein complement(444329..444688) Nitrosomonas europaea ATCC 19718 1081322 NP_840477.1 CDS rpmH NC_004757.1 444728 444862 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(444728..444862) Nitrosomonas europaea ATCC 19718 1081323 NP_840478.1 CDS NE0391 NC_004757.1 445146 445607 D hypothetical protein 445146..445607 Nitrosomonas europaea ATCC 19718 1081324 NP_840479.1 CDS NE0392 NC_004757.1 445647 445862 D hypothetical protein 445647..445862 Nitrosomonas europaea ATCC 19718 1081325 NP_840480.1 CDS proC NC_004757.1 445939 446751 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 445939..446751 Nitrosomonas europaea ATCC 19718 1081326 NP_840481.1 CDS NE0394 NC_004757.1 446809 447369 D hypothetical protein 446809..447369 Nitrosomonas europaea ATCC 19718 1081327 NP_840482.1 CDS NE0395 NC_004757.1 447369 447671 D hypothetical protein 447369..447671 Nitrosomonas europaea ATCC 19718 1081328 NP_840483.1 CDS NE0396 NC_004757.1 447786 448868 D hypothetical protein 447786..448868 Nitrosomonas europaea ATCC 19718 1081329 NP_840484.1 CDS NE0397 NC_004757.1 448948 449862 D similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 448948..449862 Nitrosomonas europaea ATCC 19718 1081330 NP_840485.1 CDS zwf NC_004757.1 449859 451349 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 449859..451349 Nitrosomonas europaea ATCC 19718 1081331 NP_840486.1 CDS tuf2 NC_004757.1 451898 453088 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 451898..453088 Nitrosomonas europaea ATCC 19718 1081335 NP_840487.1 CDS rpsJ NC_004757.1 453150 453458 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 453150..453458 Nitrosomonas europaea ATCC 19718 1081336 NP_840488.1 CDS rplC NC_004757.1 453506 454153 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 453506..454153 Nitrosomonas europaea ATCC 19718 1081337 NP_840489.1 CDS rplD NC_004757.1 454174 454794 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 454174..454794 Nitrosomonas europaea ATCC 19718 1081338 NP_840490.1 CDS rplW NC_004757.1 454791 455126 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 454791..455126 Nitrosomonas europaea ATCC 19718 1081339 NP_840491.1 CDS rplB NC_004757.1 455123 455959 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 455123..455959 Nitrosomonas europaea ATCC 19718 1081340 NP_840492.1 CDS rpsS NC_004757.1 455965 456249 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 455965..456249 Nitrosomonas europaea ATCC 19718 1081341 NP_840493.1 CDS rplV NC_004757.1 456258 456590 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 456258..456590 Nitrosomonas europaea ATCC 19718 1081342 NP_840494.1 CDS rpsC NC_004757.1 456627 457274 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 456627..457274 Nitrosomonas europaea ATCC 19718 1081343 NP_840495.1 CDS rplP NC_004757.1 457364 457780 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 457364..457780 Nitrosomonas europaea ATCC 19718 1081344 NP_840496.1 CDS rpmC NC_004757.1 457788 457982 D 50S ribosomal protein L29 457788..457982 Nitrosomonas europaea ATCC 19718 1081345 NP_840497.1 CDS rpsQ NC_004757.1 457979 458233 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 457979..458233 Nitrosomonas europaea ATCC 19718 1081346 NP_840498.1 CDS rplN NC_004757.1 458315 458683 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 458315..458683 Nitrosomonas europaea ATCC 19718 1081347 NP_840499.1 CDS rplX NC_004757.1 458701 459018 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 458701..459018 Nitrosomonas europaea ATCC 19718 1081348 NP_840500.1 CDS rplE NC_004757.1 459033 459572 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 459033..459572 Nitrosomonas europaea ATCC 19718 1081349 NP_840501.1 CDS rpsN NC_004757.1 459583 459888 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 459583..459888 Nitrosomonas europaea ATCC 19718 1081350 NP_840502.1 CDS rpsH NC_004757.1 459961 460356 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 459961..460356 Nitrosomonas europaea ATCC 19718 1081351 NP_840503.1 CDS rplF NC_004757.1 460368 460910 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 460368..460910 Nitrosomonas europaea ATCC 19718 1081352 NP_840504.1 CDS rplR NC_004757.1 460925 461284 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 460925..461284 Nitrosomonas europaea ATCC 19718 1081353 NP_840505.1 CDS rpsE NC_004757.1 461301 461834 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 461301..461834 Nitrosomonas europaea ATCC 19718 1081354 NP_840506.1 CDS rpmD NC_004757.1 461840 462025 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 461840..462025 Nitrosomonas europaea ATCC 19718 1081355 NP_840507.1 CDS NE0420 NC_004757.1 462027 462488 D 50S ribosomal protein L15 462027..462488 Nitrosomonas europaea ATCC 19718 1081356 NP_840508.1 CDS secY NC_004757.1 462478 463803 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 462478..463803 Nitrosomonas europaea ATCC 19718 1081357 NP_840509.1 CDS infA NC_004757.1 463811 464029 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 463811..464029 Nitrosomonas europaea ATCC 19718 1081358 NP_840510.1 CDS rpsM NC_004757.1 464218 464577 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 464218..464577 Nitrosomonas europaea ATCC 19718 1081359 NP_840511.1 CDS rpsK NC_004757.1 464618 465007 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 464618..465007 Nitrosomonas europaea ATCC 19718 1081360 NP_840512.1 CDS rpsD NC_004757.1 465022 465648 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 465022..465648 Nitrosomonas europaea ATCC 19718 1081361 NP_840513.1 CDS rpoA NC_004757.1 465678 466688 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 465678..466688 Nitrosomonas europaea ATCC 19718 1081362 NP_840514.1 CDS rplQ NC_004757.1 466675 467067 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 466675..467067 Nitrosomonas europaea ATCC 19718 1081363 NP_840515.1 CDS NE0428 NC_004757.1 467402 467713 R hypothetical protein complement(467402..467713) Nitrosomonas europaea ATCC 19718 1081365 NP_840516.1 CDS NE0429 NC_004757.1 467697 468140 R hypothetical protein complement(467697..468140) Nitrosomonas europaea ATCC 19718 1081366 NP_840517.1 CDS smpB NC_004757.1 468236 468691 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 468236..468691 Nitrosomonas europaea ATCC 19718 1081367 NP_840518.1 CDS NE0431 NC_004757.1 468688 469767 D cytochrome oxidase assembly 468688..469767 Nitrosomonas europaea ATCC 19718 1081368 NP_840519.1 CDS NE0432 NC_004757.1 469864 470277 D transmembrane protein 469864..470277 Nitrosomonas europaea ATCC 19718 1081369 NP_840520.1 CDS dnaX NC_004757.1 470671 472248 D DNA polymerase III subunits gamma/tau 470671..472248 Nitrosomonas europaea ATCC 19718 1081371 NP_840521.1 CDS NE0434 NC_004757.1 472265 472588 D hypothetical protein 472265..472588 Nitrosomonas europaea ATCC 19718 1081372 NP_840522.1 CDS NE0435 NC_004757.1 472644 473522 D pseudouridylate synthase family protein 1 472644..473522 Nitrosomonas europaea ATCC 19718 1081373 NP_840523.1 CDS NE0436 NC_004757.1 473497 474435 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(473497..474435) Nitrosomonas europaea ATCC 19718 1081374 NP_840524.1 CDS NE0437 NC_004757.1 474482 474985 D cytidine and deoxycytidylate deaminase zinc-binding region 474482..474985 Nitrosomonas europaea ATCC 19718 1081375 NP_840525.1 CDS NE0438 NC_004757.1 475400 477142 D malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 475400..477142 Nitrosomonas europaea ATCC 19718 1081376 NP_840526.1 CDS serB NC_004757.1 477187 478017 R serB; phosphoserine phosphatase protein complement(477187..478017) Nitrosomonas europaea ATCC 19718 1081377 NP_840527.1 CDS NE0440 NC_004757.1 478104 479579 R hypothetical protein complement(478104..479579) Nitrosomonas europaea ATCC 19718 1081378 NP_840528.1 CDS NE0441 NC_004757.1 479870 481363 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 479870..481363 Nitrosomonas europaea ATCC 19718 1081379 NP_840529.1 CDS holC NC_004757.1 481428 481817 D DNA polymerase III subunit chi 481428..481817 Nitrosomonas europaea ATCC 19718 1081380 NP_840530.1 CDS NE0443 NC_004757.1 481890 482300 D hypothetical protein 481890..482300 Nitrosomonas europaea ATCC 19718 1081381 NP_840531.1 CDS valS NC_004757.1 482437 485193 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 482437..485193 Nitrosomonas europaea ATCC 19718 1081382 NP_840532.1 CDS hemE NC_004757.1 485267 486334 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 485267..486334 Nitrosomonas europaea ATCC 19718 1081383 NP_840533.1 CDS NE0446 NC_004757.1 486487 486972 R hypothetical protein complement(486487..486972) Nitrosomonas europaea ATCC 19718 1081384 NP_840534.1 CDS NE0447 NC_004757.1 487118 487831 R hypothetical protein complement(487118..487831) Nitrosomonas europaea ATCC 19718 1081385 NP_840535.1 CDS Rh50 NC_004757.1 487992 489269 R ammonium transporter complement(487992..489269) Nitrosomonas europaea ATCC 19718 1081386 NP_840536.1 CDS murI NC_004757.1 489941 490756 R aspartate and glutamate racemase:glutamate racemase complement(489941..490756) Nitrosomonas europaea ATCC 19718 1081387 NP_840537.1 CDS int NC_004757.1 490875 491753 R Phage integrase complement(490875..491753) Nitrosomonas europaea ATCC 19718 1081388 NP_840538.1 CDS NE0451 NC_004757.1 492364 493215 R integrase catalytic subunit complement(492364..493215) Nitrosomonas europaea ATCC 19718 1081389 NP_840539.1 CDS NE0452 NC_004757.1 493269 493592 R transposase IS911 complement(493269..493592) Nitrosomonas europaea ATCC 19718 1081390 NP_840540.1 CDS NE0454 NC_004757.1 494466 495416 D integrase catalytic subunit 494466..495416 Nitrosomonas europaea ATCC 19718 1081392 NP_840541.1 CDS NE0455 NC_004757.1 496135 496560 R dksA/traR C4-type zinc finger complement(496135..496560) Nitrosomonas europaea ATCC 19718 1081393 NP_840542.1 CDS NE0456 NC_004757.1 496832 497764 D esterase/lipase/thioesterase family protein 496832..497764 Nitrosomonas europaea ATCC 19718 1081394 NP_840543.1 CDS NE0457 NC_004757.1 497812 499326 R hypothetical protein complement(497812..499326) Nitrosomonas europaea ATCC 19718 1081395 NP_840544.1 CDS Plec1 NC_004757.1 499467 501563 R hypothetical protein complement(499467..501563) Nitrosomonas europaea ATCC 19718 1081396 NP_840545.1 CDS fliR NC_004757.1 501725 502522 R hypothetical protein complement(501725..502522) Nitrosomonas europaea ATCC 19718 1081397 NP_840546.1 CDS fliQ NC_004757.1 502615 502890 R family 3 exporter FliQ complement(502615..502890) Nitrosomonas europaea ATCC 19718 1081398 NP_840547.1 CDS fliP NC_004757.1 502906 503712 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(502906..503712) Nitrosomonas europaea ATCC 19718 1081399 NP_840548.1 CDS NE0462 NC_004757.1 503702 504151 R similar to MOPB PROTEIN pir||S35275 probable flagellar biosynthesis protein mopB - Erwinia carotovora subsp. atroseptica, evalue=1.00e-16, 50% identity; mopB flagellar biosynthesis complement(503702..504151) Nitrosomonas europaea ATCC 19718 1081400 NP_840549.1 CDS fliN NC_004757.1 504178 504651 R flagellar motor switch FliN complement(504178..504651) Nitrosomonas europaea ATCC 19718 1081401 NP_840550.1 CDS fliM NC_004757.1 504666 505658 R flagellar motor switch protein FliM complement(504666..505658) Nitrosomonas europaea ATCC 19718 1081402 NP_840551.1 CDS fliL NC_004757.1 505671 506159 R interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL complement(505671..506159) Nitrosomonas europaea ATCC 19718 1081403 NP_840552.1 CDS NE0466 NC_004757.1 506417 508981 R glycosyl transferase family protein complement(506417..508981) Nitrosomonas europaea ATCC 19718 1081404 NP_840553.1 CDS NE0467 NC_004757.1 509576 510355 D hypothetical protein 509576..510355 Nitrosomonas europaea ATCC 19718 1081405 NP_840554.1 CDS rfaH NC_004757.1 510537 511034 D transcriptional activator 510537..511034 Nitrosomonas europaea ATCC 19718 1081406 NP_840555.1 CDS rmlB NC_004757.1 511368 512426 D NAD-dependent epimerase/dehydratase family protein 511368..512426 Nitrosomonas europaea ATCC 19718 1081407 NP_840556.1 CDS NE0471 NC_004757.1 512939 513439 D hypothetical protein 512939..513439 Nitrosomonas europaea ATCC 19718 1081409 NP_840557.1 CDS NE0472 NC_004757.1 513569 514387 D ABC transporter 513569..514387 Nitrosomonas europaea ATCC 19718 1081410 NP_840558.1 CDS NE0473 NC_004757.1 514553 514918 D hypothetical protein 514553..514918 Nitrosomonas europaea ATCC 19718 1081411 NP_840559.1 CDS NE0474 NC_004757.1 515103 516257 D hypothetical protein 515103..516257 Nitrosomonas europaea ATCC 19718 1081412 NP_840560.1 CDS NE0475 NC_004757.1 516404 516625 D CopG family transcriptional regulator 516404..516625 Nitrosomonas europaea ATCC 19718 1081413 NP_840561.1 CDS NE0476 NC_004757.1 516603 516857 D hypothetical protein 516603..516857 Nitrosomonas europaea ATCC 19718 1081414 NP_840562.1 CDS NE0477 NC_004757.1 517316 519226 R ABC transporter ATPase complement(517316..519226) Nitrosomonas europaea ATCC 19718 1081415 NP_840563.1 CDS NE0478 NC_004757.1 519527 519760 D hypothetical protein 519527..519760 Nitrosomonas europaea ATCC 19718 1081416 NP_840564.1 CDS NE0479 NC_004757.1 519760 520161 D PilT domain-containing protein 519760..520161 Nitrosomonas europaea ATCC 19718 1081417 NP_840565.1 CDS NE0480 NC_004757.1 520320 520748 D hypothetical protein 520320..520748 Nitrosomonas europaea ATCC 19718 1081418 NP_840566.1 CDS NE0481 NC_004757.1 520813 521118 R helix-hairpin-helix DNA-binding motif-containing protein complement(520813..521118) Nitrosomonas europaea ATCC 19718 1081419 NP_840567.1 CDS NE0482 NC_004757.1 521128 521415 R hypothetical protein complement(521128..521415) Nitrosomonas europaea ATCC 19718 1081420 NP_840568.1 CDS wzt NC_004757.1 521508 522863 D polysaccharide ABC transporter ATPase 521508..522863 Nitrosomonas europaea ATCC 19718 1081421 NP_840569.1 CDS NE0484 NC_004757.1 522860 526066 D hypothetical protein 522860..526066 Nitrosomonas europaea ATCC 19718 1081422 NP_840570.1 CDS NE0485 NC_004757.1 526108 527445 D hypothetical protein 526108..527445 Nitrosomonas europaea ATCC 19718 1081423 NP_840571.1 CDS rffE NC_004757.1 527442 528536 D UDP-N-acetylglucosamine 2-epimerase 527442..528536 Nitrosomonas europaea ATCC 19718 1081424 NP_840572.1 CDS NE0487 NC_004757.1 528536 529639 D glycosyltransferase 528536..529639 Nitrosomonas europaea ATCC 19718 1081425 NP_840573.1 CDS NE0488 NC_004757.1 529744 529986 R hypothetical protein complement(529744..529986) Nitrosomonas europaea ATCC 19718 1081426 NP_840574.1 CDS abiR NC_004757.1 529967 531649 R abortive infection phage resistance protein complement(529967..531649) Nitrosomonas europaea ATCC 19718 1081427 NP_840575.1 CDS NE0490 NC_004757.1 531968 532285 R helix-hairpin-helix DNA-binding motif-containing protein complement(531968..532285) Nitrosomonas europaea ATCC 19718 1081428 NP_840576.1 CDS NE0491 NC_004757.1 532298 532621 R hypothetical protein complement(532298..532621) Nitrosomonas europaea ATCC 19718 1081429 NP_840577.1 CDS NE0492 NC_004757.1 532909 533976 R transposase complement(532909..533976) Nitrosomonas europaea ATCC 19718 1081430 NP_840578.1 CDS NE0493 NC_004757.1 533980 534297 R hypothetical protein complement(533980..534297) Nitrosomonas europaea ATCC 19718 1081431 NP_840579.1 CDS NE0494 NC_004757.1 534294 534614 R hypothetical protein complement(534294..534614) Nitrosomonas europaea ATCC 19718 1081432 NP_840580.1 CDS NE0495 NC_004757.1 534868 535176 R hypothetical protein complement(534868..535176) Nitrosomonas europaea ATCC 19718 1081433 NP_840581.1 CDS NE0496 NC_004757.1 535662 535853 D hypothetical protein 535662..535853 Nitrosomonas europaea ATCC 19718 1081434 NP_840582.1 CDS NE0497 NC_004757.1 536217 536480 D NtrP protein 536217..536480 Nitrosomonas europaea ATCC 19718 1081435 NP_840583.1 CDS ntrR2 NC_004757.1 536477 536887 D PilT domain-containing protein 536477..536887 Nitrosomonas europaea ATCC 19718 1081436 NP_840584.1 CDS NE0499 NC_004757.1 536923 537672 D glycosyl transferase family protein 536923..537672 Nitrosomonas europaea ATCC 19718 1081437 NP_840585.1 CDS NE0500 NC_004757.1 537687 538634 D UDP-glucose 4-epimerase 537687..538634 Nitrosomonas europaea ATCC 19718 1081438 NP_840586.1 CDS NE0501 NC_004757.1 538645 539253 D sugar transferase 538645..539253 Nitrosomonas europaea ATCC 19718 1081439 NP_840587.1 CDS wbpM NC_004757.1 539262 541229 D polysaccharide biosynthesis protein CapD type 539262..541229 Nitrosomonas europaea ATCC 19718 1081440 NP_840588.1 CDS NE0503 NC_004757.1 541277 541774 R hypothetical protein complement(541277..541774) Nitrosomonas europaea ATCC 19718 1081441 NP_840589.1 CDS glnA1 NC_004757.1 541930 543336 R glutamine synthetase complement(541930..543336) Nitrosomonas europaea ATCC 19718 1081442 NP_840590.1 CDS rluD NC_004757.1 543547 544581 R rluD; ribosomal large subunit pseudouridine synthase D complement(543547..544581) Nitrosomonas europaea ATCC 19718 1081443 NP_840591.1 CDS NE0506 NC_004757.1 544616 545383 D hypothetical protein 544616..545383 Nitrosomonas europaea ATCC 19718 1081444 NP_840592.1 CDS rdgC NC_004757.1 545683 546567 D Required for efficient pilin antigenic variation; recombination associated protein 545683..546567 Nitrosomonas europaea ATCC 19718 1081446 NP_840593.1 CDS NE0508 NC_004757.1 546679 547308 R hypothetical protein complement(546679..547308) Nitrosomonas europaea ATCC 19718 1081447 NP_840594.1 CDS SCO1 NC_004757.1 547305 547925 R SCO1/SenC complement(547305..547925) Nitrosomonas europaea ATCC 19718 1081448 NP_840595.1 CDS NE0510 NC_004757.1 548033 549394 R hypothetical protein complement(548033..549394) Nitrosomonas europaea ATCC 19718 1081449 NP_840596.1 CDS NE0511 NC_004757.1 549794 550039 D hypothetical protein 549794..550039 Nitrosomonas europaea ATCC 19718 1081450 NP_840597.1 CDS NE0512 NC_004757.1 550108 550467 R hypothetical protein complement(550108..550467) Nitrosomonas europaea ATCC 19718 1081451 NP_840598.1 CDS NE0513 NC_004757.1 550787 552349 D amino acid transporter 550787..552349 Nitrosomonas europaea ATCC 19718 1081452 NP_840599.1 CDS NE0514 NC_004757.1 552429 553118 R response regulator baeR complement(552429..553118) Nitrosomonas europaea ATCC 19718 1081453 NP_840600.1 CDS baeS NC_004757.1 553115 554551 R sensory transduction histidine kinase complement(553115..554551) Nitrosomonas europaea ATCC 19718 1081454 NP_840601.1 CDS NE0516 NC_004757.1 554896 555660 D hypothetical protein 554896..555660 Nitrosomonas europaea ATCC 19718 1081455 NP_840602.1 CDS NE0517 NC_004757.1 555685 556635 R integrase catalytic subunit complement(555685..556635) Nitrosomonas europaea ATCC 19718 1081456 NP_840603.1 CDS NE0518 NC_004757.1 556781 557149 D transposase 556781..557149 Nitrosomonas europaea ATCC 19718 1081457 NP_840604.1 CDS NE0519 NC_004757.1 556954 557529 D IS4 family transposase 556954..557529 Nitrosomonas europaea ATCC 19718 1081458 NP_840605.1 CDS NE0520 NC_004757.1 557637 558425 R hypothetical protein complement(557637..558425) Nitrosomonas europaea ATCC 19718 1081459 NP_840606.1 CDS cbbF NC_004757.1 558897 559901 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 558897..559901 Nitrosomonas europaea ATCC 19718 1081460 NP_840607.1 CDS NE0522 NC_004757.1 559927 560907 R glutathione S-transferase complement(559927..560907) Nitrosomonas europaea ATCC 19718 1081461 NP_840608.1 CDS NE0523 NC_004757.1 560895 561188 R hypothetical protein complement(560895..561188) Nitrosomonas europaea ATCC 19718 1081462 NP_840609.1 CDS NE0524 NC_004757.1 561818 562201 R hypothetical protein complement(561818..562201) Nitrosomonas europaea ATCC 19718 1081463 NP_840610.1 CDS NE0525 NC_004757.1 562198 562608 R hypothetical protein complement(562198..562608) Nitrosomonas europaea ATCC 19718 1081464 NP_840611.1 CDS NE0526 NC_004757.1 562796 563176 R hypothetical protein complement(562796..563176) Nitrosomonas europaea ATCC 19718 1081465 NP_840612.1 CDS NE0527 NC_004757.1 563220 563840 D FtsJ cell division protein 563220..563840 Nitrosomonas europaea ATCC 19718 1081466 NP_840613.1 CDS hflB NC_004757.1 563925 565856 D hflB; ATP-dependent zinc metallopeptidase (cell division ftsh) transmembrane protein 563925..565856 Nitrosomonas europaea ATCC 19718 1081467 NP_840614.1 CDS folP NC_004757.1 565925 566767 D dihydropteroate synthase 565925..566767 Nitrosomonas europaea ATCC 19718 1081468 NP_840615.1 CDS glmM NC_004757.1 566948 568324 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 566948..568324 Nitrosomonas europaea ATCC 19718 1081469 NP_840616.1 CDS NE0531 NC_004757.1 568448 569461 D phosphate-binding protein 568448..569461 Nitrosomonas europaea ATCC 19718 1081470 NP_840617.1 CDS cysG NC_004757.1 569551 571056 D uroporphyrinogen-III methylase CysG 569551..571056 Nitrosomonas europaea ATCC 19718 1081471 NP_840618.1 CDS NE0533 NC_004757.1 571180 571770 D RNA polymerase ECF-subfamily sigma-70 factor 571180..571770 Nitrosomonas europaea ATCC 19718 1081472 NP_840619.1 CDS NE0534 NC_004757.1 571758 572684 D transmembrane sensor 571758..572684 Nitrosomonas europaea ATCC 19718 1081473 NP_840620.1 CDS NE0535 NC_004757.1 572982 575528 D TonB-dependent receptor protein 572982..575528 Nitrosomonas europaea ATCC 19718 1081474 NP_840621.1 CDS NE0536 NC_004757.1 575621 576838 D BNR repeat-containing protein 575621..576838 Nitrosomonas europaea ATCC 19718 1081475 NP_840622.1 CDS NE0537 NC_004757.1 577321 578589 D hypothetical protein 577321..578589 Nitrosomonas europaea ATCC 19718 1081476 NP_840623.1 CDS NE0538 NC_004757.1 578605 580020 D Outer membrane efflux protein 578605..580020 Nitrosomonas europaea ATCC 19718 1081477 NP_840624.1 CDS yegM NC_004757.1 580264 581457 D hemolysin D 580264..581457 Nitrosomonas europaea ATCC 19718 1081478 NP_840625.1 CDS NE0540 NC_004757.1 581454 584576 D acriflavin resistance protein 581454..584576 Nitrosomonas europaea ATCC 19718 1081479 NP_840626.1 CDS NE0541 NC_004757.1 584746 585246 D ECF subfamily RNA polymerase sigma factor 584746..585246 Nitrosomonas europaea ATCC 19718 1081480 NP_840627.1 CDS NE0542 NC_004757.1 585315 586298 D transmembrane sensor 585315..586298 Nitrosomonas europaea ATCC 19718 1081481 NP_840628.1 CDS NE0543 NC_004757.1 586410 587033 R hypothetical protein complement(586410..587033) Nitrosomonas europaea ATCC 19718 1081482 NP_840629.1 CDS NE0544 NC_004757.1 587054 587809 R similar to (L31491) ORF1; [Plasmid pTOM9], evalue=4.00e-71, 60% identity; hypothetical protein complement(587054..587809) Nitrosomonas europaea ATCC 19718 1081483 NP_840630.1 CDS NE0545 NC_004757.1 588021 588530 R hypothetical protein complement(588021..588530) Nitrosomonas europaea ATCC 19718 1081484 NP_840631.1 CDS NE0546 NC_004757.1 589287 591650 D TonB-dependent receptor protein 589287..591650 Nitrosomonas europaea ATCC 19718 1081485 NP_840632.1 CDS NE0547 NC_004757.1 591808 592407 D ECF subfamily RNA polymerase sigma factor 591808..592407 Nitrosomonas europaea ATCC 19718 1081486 NP_840633.1 CDS NE0548 NC_004757.1 592474 593424 D transmembrane sensor 592474..593424 Nitrosomonas europaea ATCC 19718 1081487 NP_840634.1 CDS NE0549 NC_004757.1 593567 595915 D TonB-dependent receptor protein 593567..595915 Nitrosomonas europaea ATCC 19718 1081488 NP_840635.1 CDS NE0550 NC_004757.1 595918 597150 D hypothetical protein 595918..597150 Nitrosomonas europaea ATCC 19718 1081489 NP_840636.1 CDS NE0551 NC_004757.1 597544 597831 D similar to (NC_002122) yacA [Plasmid ColIb-P9], evalue=3.00e-11, 41% identity; hypothetical protein 597544..597831 Nitrosomonas europaea ATCC 19718 1081490 NP_840637.1 CDS NE0552 NC_004757.1 597828 598118 D hypothetical protein 597828..598118 Nitrosomonas europaea ATCC 19718 1081491 NP_840638.1 CDS NE0553 NC_004757.1 598173 598589 R PilT domain-containing protein complement(598173..598589) Nitrosomonas europaea ATCC 19718 1081492 NP_840639.1 CDS NE0554 NC_004757.1 598775 599368 D ECF subfamily RNA polymerase sigma factor 598775..599368 Nitrosomonas europaea ATCC 19718 1081493 NP_840640.1 CDS NE0555 NC_004757.1 599368 600297 D transmembrane sensor 599368..600297 Nitrosomonas europaea ATCC 19718 1081494 NP_840641.1 CDS NE0556 NC_004757.1 600514 602859 D TonB-dependent receptor protein 600514..602859 Nitrosomonas europaea ATCC 19718 1081495 NP_840642.1 CDS NE0557 NC_004757.1 602989 603648 D ECF subfamily RNA polymerase sigma-70 factor 602989..603648 Nitrosomonas europaea ATCC 19718 1081496 NP_840643.1 CDS NE0558 NC_004757.1 603748 604779 D transcriptional regulator 603748..604779 Nitrosomonas europaea ATCC 19718 1081497 NP_840644.1 CDS NE0559 NC_004757.1 604928 607327 D TonB-dependent receptor protein 604928..607327 Nitrosomonas europaea ATCC 19718 1081498 NP_840645.1 CDS NE0560 NC_004757.1 607648 608016 D transposase 607648..608016 Nitrosomonas europaea ATCC 19718 1081499 NP_840646.1 CDS NE0561 NC_004757.1 607821 608396 D IS4 family transposase 607821..608396 Nitrosomonas europaea ATCC 19718 1081500 NP_840647.1 CDS NE0562 NC_004757.1 608474 609424 D integrase catalytic subunit 608474..609424 Nitrosomonas europaea ATCC 19718 1081501 NP_840648.1 CDS NE0564 NC_004757.1 610663 613401 R multicopper oxidase type 1 complement(610663..613401) Nitrosomonas europaea ATCC 19718 1081503 NP_840649.1 CDS NE0565 NC_004757.1 613443 614462 R hypothetical protein complement(613443..614462) Nitrosomonas europaea ATCC 19718 1081504 NP_840650.1 CDS NE0566 NC_004757.1 615224 616471 D hypothetical protein 615224..616471 Nitrosomonas europaea ATCC 19718 1081505 NP_840651.1 CDS dfrA NC_004757.1 616514 617062 R dihydrofolate reductase complement(616514..617062) Nitrosomonas europaea ATCC 19718 1081506 NP_840652.1 CDS thyA NC_004757.1 617059 617853 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(617059..617853) Nitrosomonas europaea ATCC 19718 1081507 NP_840653.1 CDS NE0569 NC_004757.1 617952 619454 D cytosol aminopeptidase 617952..619454 Nitrosomonas europaea ATCC 19718 1081508 NP_840654.1 CDS NE0570 NC_004757.1 619505 619855 D lipase 619505..619855 Nitrosomonas europaea ATCC 19718 1081509 NP_840655.1 CDS NE0571 NC_004757.1 619977 620738 R hypothetical protein complement(619977..620738) Nitrosomonas europaea ATCC 19718 1081510 NP_840656.1 CDS cbl NC_004757.1 621048 621965 R transcriptional regulator CysB-like protein complement(621048..621965) Nitrosomonas europaea ATCC 19718 1081511 NP_840657.1 CDS NE0573 NC_004757.1 622060 623685 R aminotransferase class-V complement(622060..623685) Nitrosomonas europaea ATCC 19718 1081512 NP_840658.1 CDS NE0574 NC_004757.1 623672 624589 R major membrane protein I complement(623672..624589) Nitrosomonas europaea ATCC 19718 1081513 NP_840659.1 CDS NE0575 NC_004757.1 624698 625636 R hexapeptide repeat-containing transferase complement(624698..625636) Nitrosomonas europaea ATCC 19718 1081514 NP_840660.1 CDS cysA NC_004757.1 625636 626724 R sulfate transport ATP-binding ABC transporter protein CysA complement(625636..626724) Nitrosomonas europaea ATCC 19718 1081515 NP_840661.1 CDS cysW NC_004757.1 626721 627599 R sulfate transport ABC transporter protein CysW complement(626721..627599) Nitrosomonas europaea ATCC 19718 1081516 NP_840662.1 CDS cysU NC_004757.1 627609 628442 R sulfate transport ABC transporter protein CysU complement(627609..628442) Nitrosomonas europaea ATCC 19718 1081517 NP_840663.1 CDS NE0579 NC_004757.1 628508 629296 R hypothetical protein complement(628508..629296) Nitrosomonas europaea ATCC 19718 1081518 NP_840664.1 CDS NE0580 NC_004757.1 629387 630256 R hypothetical protein complement(629387..630256) Nitrosomonas europaea ATCC 19718 1081519 NP_840665.1 CDS NE0581 NC_004757.1 630410 630715 R diverged CheY-domain-containing protein complement(630410..630715) Nitrosomonas europaea ATCC 19718 1081520 NP_840666.1 CDS sbp1 NC_004757.1 630774 631781 R sulfate-/thiosulfate-binding protein complement(630774..631781) Nitrosomonas europaea ATCC 19718 1081521 NP_840667.1 CDS NE0583 NC_004757.1 631810 633384 R hypothetical protein complement(631810..633384) Nitrosomonas europaea ATCC 19718 1081522 NP_840668.1 CDS rpoH NC_004757.1 633671 634513 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 633671..634513 Nitrosomonas europaea ATCC 19718 1081523 NP_840669.1 CDS NE0585 NC_004757.1 634570 635280 R hypothetical protein complement(634570..635280) Nitrosomonas europaea ATCC 19718 1081524 NP_840670.1 CDS NE0586 NC_004757.1 635552 636943 D hypothetical protein 635552..636943 Nitrosomonas europaea ATCC 19718 1081525 NP_840671.1 CDS NE0587 NC_004757.1 636946 638379 D hypothetical protein 636946..638379 Nitrosomonas europaea ATCC 19718 1081526 NP_840672.1 CDS NE0588 NC_004757.1 638399 640384 R Phage integrase:chain length determinant protein complement(638399..640384) Nitrosomonas europaea ATCC 19718 1081527 NP_840673.1 CDS ppc NC_004757.1 640638 643439 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(640638..643439) Nitrosomonas europaea ATCC 19718 1081528 NP_840674.1 CDS hemC NC_004757.1 643563 644489 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 643563..644489 Nitrosomonas europaea ATCC 19718 1081529 NP_840675.1 CDS hemD NC_004757.1 644520 645299 D uroporphyrinogen III synthase HEM4 644520..645299 Nitrosomonas europaea ATCC 19718 1081530 NP_840676.1 CDS NE0592 NC_004757.1 645323 646330 D uroporphyrin-III C-methyltransferase 645323..646330 Nitrosomonas europaea ATCC 19718 1081531 NP_840677.1 CDS hemY NC_004757.1 646353 647522 D protein porphyrin biosynthesis 646353..647522 Nitrosomonas europaea ATCC 19718 1081532 NP_840678.1 CDS NE0594 NC_004757.1 647527 648573 R catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase complement(647527..648573) Nitrosomonas europaea ATCC 19718 1081533 NP_840679.1 CDS NE0595 NC_004757.1 648603 649514 D oxidoreductase protein 648603..649514 Nitrosomonas europaea ATCC 19718 1081534 NP_840680.1 CDS pilC NC_004757.1 649568 650788 D type II secretion system protein 649568..650788 Nitrosomonas europaea ATCC 19718 1081535 NP_840681.1 CDS pilD NC_004757.1 650836 651696 D prepilin cysteine protease (C20), type IV 650836..651696 Nitrosomonas europaea ATCC 19718 1081536 NP_840682.1 CDS coaE NC_004757.1 651699 652310 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 651699..652310 Nitrosomonas europaea ATCC 19718 1081537 NP_840683.1 CDS NE0599 NC_004757.1 652351 653139 D hypothetical protein 652351..653139 Nitrosomonas europaea ATCC 19718 1081538 NP_840684.1 CDS NE0600 NC_004757.1 653465 654706 R lysophospholipid transporter LplT complement(653465..654706) Nitrosomonas europaea ATCC 19718 1081539 NP_840685.1 CDS NE0601 NC_004757.1 654957 656387 D Na+/H+ antiporter NhaC 654957..656387 Nitrosomonas europaea ATCC 19718 1081540 NP_840686.1 CDS NE0602 NC_004757.1 656392 656856 D hypothetical protein 656392..656856 Nitrosomonas europaea ATCC 19718 1081541 NP_840687.1 CDS NE0603 NC_004757.1 656861 657532 D transmembrane protein 656861..657532 Nitrosomonas europaea ATCC 19718 1081542 NP_840688.1 CDS NE0604 NC_004757.1 657708 658502 D ubiquinone/menaquinone biosynthesis methlytransferase UbiE 657708..658502 Nitrosomonas europaea ATCC 19718 1081543 NP_840689.1 CDS NE0605 NC_004757.1 658709 658954 D hypothetical protein 658709..658954 Nitrosomonas europaea ATCC 19718 1081544 NP_840690.1 CDS cah NC_004757.1 658986 659783 D carbonic anhydrase 658986..659783 Nitrosomonas europaea ATCC 19718 1081545 NP_840691.1 CDS gcvT NC_004757.1 660304 661395 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 660304..661395 Nitrosomonas europaea ATCC 19718 1081546 NP_840692.1 CDS gcvH1 NC_004757.1 661468 661857 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 661468..661857 Nitrosomonas europaea ATCC 19718 1081547 NP_840693.1 CDS NE0609 NC_004757.1 661926 663287 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 661926..663287 Nitrosomonas europaea ATCC 19718 1081548 NP_840694.1 CDS NE0610 NC_004757.1 663357 664808 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 663357..664808 Nitrosomonas europaea ATCC 19718 1081549 NP_840695.1 CDS NE0611 NC_004757.1 664810 665745 D PfkB family of carbohydrate kinase 664810..665745 Nitrosomonas europaea ATCC 19718 1081550 NP_840696.1 CDS plsC NC_004757.1 665885 666688 D phospholipid/glycerol acyltransferase 665885..666688 Nitrosomonas europaea ATCC 19718 1081551 NP_840697.1 CDS apaH NC_004757.1 666630 667436 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(666630..667436) Nitrosomonas europaea ATCC 19718 1081552 NP_840698.1 CDS NE0614 NC_004757.1 667443 668249 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(667443..668249) Nitrosomonas europaea ATCC 19718 1081553 NP_840699.1 CDS omlA NC_004757.1 668246 668740 R outer membrane lipoprotein OmlA complement(668246..668740) Nitrosomonas europaea ATCC 19718 1081554 NP_840700.1 CDS fur1 NC_004757.1 668953 669393 D hypothetical protein 668953..669393 Nitrosomonas europaea ATCC 19718 1081555 NP_840701.1 CDS oprC NC_004757.1 669849 672059 D TonB-dependent receptor protein 669849..672059 Nitrosomonas europaea ATCC 19718 1081556 NP_840702.1 CDS NE0618 NC_004757.1 672090 674828 R mono valent cation-transporting P-type ATPase complement(672090..674828) Nitrosomonas europaea ATCC 19718 1081557 NP_840703.1 CDS NE0619 NC_004757.1 675094 675876 D hypothetical protein 675094..675876 Nitrosomonas europaea ATCC 19718 1081558 NP_840704.1 CDS NE0620 NC_004757.1 675883 677067 R Iron-containing alcohol dehydrogenase complement(675883..677067) Nitrosomonas europaea ATCC 19718 1081559 NP_840705.1 CDS NE0621 NC_004757.1 677067 677369 R hypothetical protein complement(677067..677369) Nitrosomonas europaea ATCC 19718 1081560 NP_840706.1 CDS NE0622 NC_004757.1 677593 677928 D hypothetical protein 677593..677928 Nitrosomonas europaea ATCC 19718 1081561 NP_840707.1 CDS dcd NC_004757.1 678034 678600 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(678034..678600) Nitrosomonas europaea ATCC 19718 1081562 NP_840708.1 CDS mrp NC_004757.1 678610 679695 R hypothetical protein complement(678610..679695) Nitrosomonas europaea ATCC 19718 1081563 NP_840709.1 CDS metG NC_004757.1 679795 681915 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 679795..681915 Nitrosomonas europaea ATCC 19718 1081564 NP_840710.1 CDS pepN NC_004757.1 682037 684682 D aminopeptidase N 682037..684682 Nitrosomonas europaea ATCC 19718 1081565 NP_840711.1 CDS NE0627 NC_004757.1 685326 687548 D TonB-dependent receptor protein 685326..687548 Nitrosomonas europaea ATCC 19718 1081566 NP_840712.1 CDS NE0631 NC_004757.1 691946 692488 D hypothetical protein 691946..692488 Nitrosomonas europaea ATCC 19718 1081570 NP_840713.1 CDS NE0632 NC_004757.1 692481 692837 D hypothetical protein 692481..692837 Nitrosomonas europaea ATCC 19718 1081571 NP_840714.1 CDS NE0633 NC_004757.1 692877 693215 R hypothetical protein complement(692877..693215) Nitrosomonas europaea ATCC 19718 1081572 NP_840715.1 CDS cobO NC_004757.1 693412 694038 R ATP:corrinoid adenosyltransferase BtuR/CobO/CobP complement(693412..694038) Nitrosomonas europaea ATCC 19718 1081573 NP_840716.1 CDS NE0635 NC_004757.1 694025 694606 R hypothetical protein complement(694025..694606) Nitrosomonas europaea ATCC 19718 1081574 NP_840717.1 CDS NE0636 NC_004757.1 694616 696454 R TonB-dependent receptor protein complement(694616..696454) Nitrosomonas europaea ATCC 19718 1081575 NP_840718.1 CDS tatC NC_004757.1 696935 697711 R hypothetical protein complement(696935..697711) Nitrosomonas europaea ATCC 19718 1081576 NP_840719.1 CDS NE0638 NC_004757.1 697808 698203 R mttA/Hcf106 family protein complement(697808..698203) Nitrosomonas europaea ATCC 19718 1081577 NP_840720.1 CDS tatA NC_004757.1 698288 698518 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(698288..698518) Nitrosomonas europaea ATCC 19718 1081578 NP_840721.1 CDS hitA NC_004757.1 698537 698887 R HIT (histidine triad) family protein complement(698537..698887) Nitrosomonas europaea ATCC 19718 1081579 NP_840722.1 CDS hisE NC_004757.1 698889 699227 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(698889..699227) Nitrosomonas europaea ATCC 19718 1081580 NP_840723.1 CDS hisI NC_004757.1 699224 699613 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(699224..699613) Nitrosomonas europaea ATCC 19718 1081581 NP_840724.1 CDS hisF NC_004757.1 699770 700546 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(699770..700546) Nitrosomonas europaea ATCC 19718 1081582 NP_840725.1 CDS hisA NC_004757.1 700646 701395 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(700646..701395) Nitrosomonas europaea ATCC 19718 1081583 NP_840726.1 CDS hisH NC_004757.1 701464 702102 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(701464..702102) Nitrosomonas europaea ATCC 19718 1081584 NP_840727.1 CDS hisB NC_004757.1 702133 702726 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(702133..702726) Nitrosomonas europaea ATCC 19718 1081585 NP_840728.1 CDS hisC1 NC_004757.1 702762 703841 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(702762..703841) Nitrosomonas europaea ATCC 19718 1081586 NP_840729.1 CDS NE0648 NC_004757.1 703881 704174 R hypothetical protein complement(703881..704174) Nitrosomonas europaea ATCC 19718 1081587 NP_840730.1 CDS ispH NC_004757.1 704465 705436 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 704465..705436 Nitrosomonas europaea ATCC 19718 1081588 NP_840731.1 CDS NE0650 NC_004757.1 705439 706545 R NAD binding site:D-amino acid oxidase complement(705439..706545) Nitrosomonas europaea ATCC 19718 1081589 NP_840732.1 CDS aroQ1 NC_004757.1 706708 707151 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 706708..707151 Nitrosomonas europaea ATCC 19718 1081590 NP_840733.1 CDS accB1 NC_004757.1 707352 707810 D acetyl-CoA carboxylase biotin carboxyl carrier subunit 707352..707810 Nitrosomonas europaea ATCC 19718 1081591 NP_840734.1 CDS accC1 NC_004757.1 707880 709238 D accC1; biotin carboxylase protein 707880..709238 Nitrosomonas europaea ATCC 19718 1081592 NP_840735.1 CDS prmA NC_004757.1 709274 710215 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 709274..710215 Nitrosomonas europaea ATCC 19718 1081593 NP_840736.1 CDS NE0655 NC_004757.1 710212 710964 D hypothetical protein 710212..710964 Nitrosomonas europaea ATCC 19718 1081594 NP_840737.1 CDS amiB NC_004757.1 711011 712321 R cell wall hydrolase/autolysin complement(711011..712321) Nitrosomonas europaea ATCC 19718 1081595 NP_840738.1 CDS NE0657 NC_004757.1 712318 712794 R hydrolase complement(712318..712794) Nitrosomonas europaea ATCC 19718 1081596 NP_840739.1 CDS NE0658 NC_004757.1 712838 713536 R short-chain dehydrogenase/reductase complement(712838..713536) Nitrosomonas europaea ATCC 19718 1081597 NP_840740.1 CDS metK NC_004757.1 713834 714997 D methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 713834..714997 Nitrosomonas europaea ATCC 19718 1081598 NP_840741.1 CDS ahcY NC_004757.1 715129 716565 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 715129..716565 Nitrosomonas europaea ATCC 19718 1081599 NP_840742.1 CDS metF NC_004757.1 716736 717581 D 5,10-methylenetetrahydrofolate reductase oxidoreductase MetF 716736..717581 Nitrosomonas europaea ATCC 19718 1081600 NP_840743.1 CDS NE0662 NC_004757.1 719259 719885 D IS4 family transposase 719259..719885 Nitrosomonas europaea ATCC 19718 1081601 NP_840744.1 CDS NE0665 NC_004757.1 720338 721147 R hypothetical protein complement(720338..721147) Nitrosomonas europaea ATCC 19718 1081604 NP_840745.1 CDS NE0666 NC_004757.1 721379 722767 R sensory transduction histidine kinase complement(721379..722767) Nitrosomonas europaea ATCC 19718 1081605 NP_840746.1 CDS NE0667 NC_004757.1 722764 723450 R response regulator complement(722764..723450) Nitrosomonas europaea ATCC 19718 1081606 NP_840747.1 CDS NE0668 NC_004757.1 723463 724851 R Outer membrane efflux protein complement(723463..724851) Nitrosomonas europaea ATCC 19718 1081607 NP_840748.1 CDS NE0669 NC_004757.1 724848 727988 R acriflavin resistance protein complement(724848..727988) Nitrosomonas europaea ATCC 19718 1081608 NP_840749.1 CDS NE0670 NC_004757.1 727999 728997 R membrane fusion protein MtrC complement(727999..728997) Nitrosomonas europaea ATCC 19718 1081609 NP_840750.1 CDS sbcB NC_004757.1 729551 731041 D Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 729551..731041 Nitrosomonas europaea ATCC 19718 1081610 NP_840751.1 CDS NE0672 NC_004757.1 731041 731757 D hypothetical protein 731041..731757 Nitrosomonas europaea ATCC 19718 1081611 NP_840752.1 CDS glcF NC_004757.1 731786 733045 R glycolate oxidase iron-sulfur subunit complement(731786..733045) Nitrosomonas europaea ATCC 19718 1081612 NP_840753.1 CDS glcE NC_004757.1 733049 734134 R glycolate oxidase FAD binding subunit complement(733049..734134) Nitrosomonas europaea ATCC 19718 1081613 NP_840754.1 CDS glcD NC_004757.1 734144 735598 R glcD; glycolate oxidase subunit GlcD complement(734144..735598) Nitrosomonas europaea ATCC 19718 1081614 NP_840755.1 CDS NE0676 NC_004757.1 735588 736508 R oxidoreductase complement(735588..736508) Nitrosomonas europaea ATCC 19718 1081615 NP_840756.1 CDS rmlA NC_004757.1 736794 737675 D ADP-glucose pyrophosphorylase 736794..737675 Nitrosomonas europaea ATCC 19718 1081616 NP_840757.1 CDS rmlC NC_004757.1 737675 738220 D dTDP-4-dehydrorhamnose 3,5-epimerase 737675..738220 Nitrosomonas europaea ATCC 19718 1081617 NP_840758.1 CDS NE0679 NC_004757.1 738290 739297 D NAD-dependent epimerase/dehydratase family protein 738290..739297 Nitrosomonas europaea ATCC 19718 1081618 NP_840759.1 CDS yrhG NC_004757.1 739381 740376 D formate and nitrite transporters 739381..740376 Nitrosomonas europaea ATCC 19718 1081619 NP_840760.1 CDS NE0681 NC_004757.1 740422 740991 R transmembrane protein complement(740422..740991) Nitrosomonas europaea ATCC 19718 1081620 NP_840761.1 CDS NE0682 NC_004757.1 740975 741604 R SCO1/SenC complement(740975..741604) Nitrosomonas europaea ATCC 19718 1081621 NP_840762.1 CDS coxA2 NC_004757.1 741698 743176 R cytochrome c oxidase subunit I complement(741698..743176) Nitrosomonas europaea ATCC 19718 1081622 NP_840763.1 CDS coxB NC_004757.1 743221 743745 R similar to cytochrome-c oxidase (EC 1.9.3.1) chain II [imported] - Bacillus stearothermophilus, evalue=5.00e-12, 36% identity; cytochrome-c oxidase chain II complement(743221..743745) Nitrosomonas europaea ATCC 19718 1081623 NP_840764.1 CDS leuC NC_004757.1 744036 745448 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 744036..745448 Nitrosomonas europaea ATCC 19718 1081624 NP_840765.1 CDS NE0686 NC_004757.1 745482 745610 D hypothetical protein 745482..745610 Nitrosomonas europaea ATCC 19718 1081625 NP_840766.1 CDS leuD NC_004757.1 745616 746281 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 745616..746281 Nitrosomonas europaea ATCC 19718 1081626 NP_840767.1 CDS leuB NC_004757.1 746278 747348 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 746278..747348 Nitrosomonas europaea ATCC 19718 1081627 NP_840768.1 CDS asd NC_004757.1 747497 748618 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 747497..748618 Nitrosomonas europaea ATCC 19718 1081628 NP_840769.1 CDS NE0690 NC_004757.1 748820 751114 D transmembrane protein 748820..751114 Nitrosomonas europaea ATCC 19718 1081629 NP_840770.1 CDS truA NC_004757.1 751240 752058 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 751240..752058 Nitrosomonas europaea ATCC 19718 1081630 NP_840771.1 CDS trpF NC_004757.1 752115 752750 D catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 752115..752750 Nitrosomonas europaea ATCC 19718 1081631 NP_840772.1 CDS trpB NC_004757.1 752734 753927 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 752734..753927 Nitrosomonas europaea ATCC 19718 1081632 NP_840773.1 CDS trpA NC_004757.1 753980 754807 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 753980..754807 Nitrosomonas europaea ATCC 19718 1081633 NP_840774.1 CDS accD NC_004757.1 754811 755704 D acetyl-CoA carboxylase carboxyl transferase subunit beta 754811..755704 Nitrosomonas europaea ATCC 19718 1081634 NP_840775.1 CDS folC NC_004757.1 755854 757146 D cytoplasmic peptidoglycan synthetase 755854..757146 Nitrosomonas europaea ATCC 19718 1081635 NP_840776.1 CDS NE0697 NC_004757.1 757167 757823 D transmembrane protein 757167..757823 Nitrosomonas europaea ATCC 19718 1081636 NP_840777.1 CDS cvpA NC_004757.1 757820 758320 D colicin V production protein 757820..758320 Nitrosomonas europaea ATCC 19718 1081637 NP_840778.1 CDS purF NC_004757.1 758425 759942 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 758425..759942 Nitrosomonas europaea ATCC 19718 1081638 NP_840779.1 CDS metZ NC_004757.1 759959 761134 D catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase 759959..761134 Nitrosomonas europaea ATCC 19718 1081639 NP_840780.1 CDS ilvA NC_004757.1 761246 762757 D threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 761246..762757 Nitrosomonas europaea ATCC 19718 1081640 NP_840781.1 CDS NE0702 NC_004757.1 762841 763176 R hypothetical protein complement(762841..763176) Nitrosomonas europaea ATCC 19718 1081641 NP_840782.1 CDS NE0703 NC_004757.1 763176 763451 R hypothetical protein complement(763176..763451) Nitrosomonas europaea ATCC 19718 1081642 NP_840783.1 CDS NE0704 NC_004757.1 763648 764361 R hypothetical protein complement(763648..764361) Nitrosomonas europaea ATCC 19718 1081643 NP_840784.1 CDS NE0705 NC_004757.1 764426 766519 R general (type II) secretion pathway (GSP) D protein complement(764426..766519) Nitrosomonas europaea ATCC 19718 1081644 NP_840785.1 CDS NE0706 NC_004757.1 766516 767037 R hypothetical protein complement(766516..767037) Nitrosomonas europaea ATCC 19718 1081645 NP_840786.1 CDS NE0707 NC_004757.1 767048 767578 R hypothetical protein complement(767048..767578) Nitrosomonas europaea ATCC 19718 1081646 NP_840787.1 CDS NE0708 NC_004757.1 767637 768488 R integrase catalytic subunit complement(767637..768488) Nitrosomonas europaea ATCC 19718 1081647 NP_840788.1 CDS NE0709 NC_004757.1 768542 768865 R transposase IS911 complement(768542..768865) Nitrosomonas europaea ATCC 19718 1081648 NP_840789.1 CDS NE0710 NC_004757.1 768964 769461 R hypothetical protein complement(768964..769461) Nitrosomonas europaea ATCC 19718 1081649 NP_840790.1 CDS NE0711 NC_004757.1 769783 770139 R hypothetical protein complement(769783..770139) Nitrosomonas europaea ATCC 19718 1081650 NP_840791.1 CDS NE0712 NC_004757.1 770522 770818 D hypothetical protein 770522..770818 Nitrosomonas europaea ATCC 19718 1081651 NP_840792.1 CDS NE0713 NC_004757.1 770815 771069 D hypothetical protein 770815..771069 Nitrosomonas europaea ATCC 19718 1081652 NP_840793.1 CDS NE0714 NC_004757.1 771266 772168 D integrase catalytic subunit 771266..772168 Nitrosomonas europaea ATCC 19718 1081653 NP_840794.1 CDS NE0715 NC_004757.1 772252 772659 D transposase 772252..772659 Nitrosomonas europaea ATCC 19718 1081654 NP_840795.1 CDS NE0716 NC_004757.1 772659 773027 D IS4 family transposase 772659..773027 Nitrosomonas europaea ATCC 19718 1081655 NP_840796.1 CDS NE0717 NC_004757.1 773113 773727 R cold shock DNA-binding domain-containing protein complement(773113..773727) Nitrosomonas europaea ATCC 19718 1081656 NP_840797.1 CDS NE0718 NC_004757.1 773820 774359 R hypothetical protein complement(773820..774359) Nitrosomonas europaea ATCC 19718 1081657 NP_840798.1 CDS NE0719 NC_004757.1 774690 775046 R hypothetical protein complement(774690..775046) Nitrosomonas europaea ATCC 19718 1081658 NP_840799.1 CDS NE0720 NC_004757.1 775153 776940 R ABC transporter ATP-binding protein/permease complement(775153..776940) Nitrosomonas europaea ATCC 19718 1081659 NP_840800.1 CDS yraL NC_004757.1 777123 778001 D COGS group COG0313, Predicted methyltransferases, evalue=3e-63; methyltransferase 777123..778001 Nitrosomonas europaea ATCC 19718 1081660 NP_840801.1 CDS NE0722 NC_004757.1 778023 779075 R AraC type helix-turn-helix complement(778023..779075) Nitrosomonas europaea ATCC 19718 1081661 NP_840802.1 CDS NE0723 NC_004757.1 779355 782954 D hypothetical protein 779355..782954 Nitrosomonas europaea ATCC 19718 1081662 NP_840803.1 CDS NE0724 NC_004757.1 783032 784495 R hypothetical protein complement(783032..784495) Nitrosomonas europaea ATCC 19718 1081663 NP_840804.1 CDS NE0725 NC_004757.1 784792 785007 R hypothetical protein complement(784792..785007) Nitrosomonas europaea ATCC 19718 1083622 NP_840805.1 CDS NE0726 NC_004757.1 785977 786675 D hypothetical protein 785977..786675 Nitrosomonas europaea ATCC 19718 1081664 NP_840806.1 CDS pyrC NC_004757.1 786772 787821 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 786772..787821 Nitrosomonas europaea ATCC 19718 1081665 NP_840807.1 CDS NE0728 NC_004757.1 787849 789105 R sensory transduction histidine kinase complement(787849..789105) Nitrosomonas europaea ATCC 19718 1081666 NP_840808.1 CDS NE0729 NC_004757.1 789105 789797 R response regulator complement(789105..789797) Nitrosomonas europaea ATCC 19718 1081667 NP_840809.1 CDS NE0730 NC_004757.1 789946 790524 D ferric uptake regulator family protein 789946..790524 Nitrosomonas europaea ATCC 19718 1081668 NP_840810.1 CDS NE0731 NC_004757.1 790757 792976 D TonB-dependent receptor protein 790757..792976 Nitrosomonas europaea ATCC 19718 1081669 NP_840811.1 CDS ybbB NC_004757.1 793128 794285 R catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase complement(793128..794285) Nitrosomonas europaea ATCC 19718 1081670 NP_840812.1 CDS selD NC_004757.1 794278 795420 R AIR synthase complement(794278..795420) Nitrosomonas europaea ATCC 19718 1081671 NP_840813.1 CDS abcZ NC_004757.1 795525 797465 D ABC transporter ATP-binding protein 795525..797465 Nitrosomonas europaea ATCC 19718 1081672 NP_840814.1 CDS NE0735 NC_004757.1 797612 797896 D cytochrome c, class IC:cytochrome c, class I 797612..797896 Nitrosomonas europaea ATCC 19718 1081673 NP_840815.1 CDS NE0736 NC_004757.1 797930 798256 D cytochrome c, class IC:cytochrome c, class I 797930..798256 Nitrosomonas europaea ATCC 19718 1081674 NP_840816.1 CDS NE0737 NC_004757.1 798327 798821 R hypothetical protein complement(798327..798821) Nitrosomonas europaea ATCC 19718 1081675 NP_840817.1 CDS NE0738 NC_004757.1 798953 799828 D hypothetical protein 798953..799828 Nitrosomonas europaea ATCC 19718 1081676 NP_840818.1 CDS NE0739 NC_004757.1 799908 800234 D cytochrome c, class I 799908..800234 Nitrosomonas europaea ATCC 19718 1081677 NP_840819.1 CDS NE0740 NC_004757.1 800250 801197 D hypothetical protein 800250..801197 Nitrosomonas europaea ATCC 19718 1081678 NP_840820.1 CDS NE0741 NC_004757.1 801210 802754 D FAD linked oxidase, N-terminal:FAD linked oxidase, C-terminal 801210..802754 Nitrosomonas europaea ATCC 19718 1081679 NP_840821.1 CDS NE0742 NC_004757.1 802806 803921 D zinc-containing alcohol dehydrogenase superfamily protein 802806..803921 Nitrosomonas europaea ATCC 19718 1081680 NP_840822.1 CDS NE0744 NC_004757.1 805211 806182 R hypothetical protein complement(805211..806182) Nitrosomonas europaea ATCC 19718 1081682 NP_840823.1 CDS NE0745 NC_004757.1 806371 807495 R hypothetical protein complement(806371..807495) Nitrosomonas europaea ATCC 19718 1081683 NP_840824.1 CDS NE0746 NC_004757.1 808629 810185 D hypothetical protein 808629..810185 Nitrosomonas europaea ATCC 19718 1081684 NP_840825.1 CDS NE0749 NC_004757.1 811455 811787 R transposase IS911 complement(811455..811787) Nitrosomonas europaea ATCC 19718 1081687 NP_840826.1 CDS tnpR NC_004757.1 813230 813790 D site-specific recombinase 813230..813790 Nitrosomonas europaea ATCC 19718 1081689 NP_840827.1 CDS NE0752 NC_004757.1 813965 814624 R hypothetical protein complement(813965..814624) Nitrosomonas europaea ATCC 19718 1081690 NP_840828.1 CDS NE0754 NC_004757.1 815092 815475 R TonB-dependent receptor complement(815092..815475) Nitrosomonas europaea ATCC 19718 1081692 NP_840829.1 CDS NE0755 NC_004757.1 815627 815959 R hypothetical protein complement(815627..815959) Nitrosomonas europaea ATCC 19718 1081693 NP_840830.1 CDS NE0756 NC_004757.1 815952 816461 R hypothetical protein complement(815952..816461) Nitrosomonas europaea ATCC 19718 1081694 NP_840831.1 CDS cobN NC_004757.1 816498 820697 R with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN complement(816498..820697) Nitrosomonas europaea ATCC 19718 1081695 NP_840832.1 CDS NE0758 NC_004757.1 820777 823050 R TonB-dependent receptor protein complement(820777..823050) Nitrosomonas europaea ATCC 19718 1081696 NP_840833.1 CDS NE0759 NC_004757.1 823592 824023 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 823592..824023 Nitrosomonas europaea ATCC 19718 1081697 NP_840834.1 CDS nusA NC_004757.1 824076 825548 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 824076..825548 Nitrosomonas europaea ATCC 19718 1081698 NP_840835.1 CDS infB NC_004757.1 825643 828312 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 825643..828312 Nitrosomonas europaea ATCC 19718 1081699 NP_840836.1 CDS rbfA NC_004757.1 828363 828716 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 828363..828716 Nitrosomonas europaea ATCC 19718 1081700 NP_840837.1 CDS truB NC_004757.1 828817 829743 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 828817..829743 Nitrosomonas europaea ATCC 19718 1081701 NP_840838.1 CDS ccmA NC_004757.1 829811 830452 D ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 829811..830452 Nitrosomonas europaea ATCC 19718 1081702 NP_840839.1 CDS ccmB NC_004757.1 830459 831118 D heme exporter protein B 830459..831118 Nitrosomonas europaea ATCC 19718 1081703 NP_840840.1 CDS ccmC NC_004757.1 831223 831966 D heme exporter CcmC 831223..831966 Nitrosomonas europaea ATCC 19718 1081704 NP_840841.1 CDS ccmE NC_004757.1 832142 832591 D CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 832142..832591 Nitrosomonas europaea ATCC 19718 1081705 NP_840842.1 CDS ccmF NC_004757.1 832633 834684 D cytochrome c-type biogenesis protein (CcmF) 832633..834684 Nitrosomonas europaea ATCC 19718 1081706 NP_840843.1 CDS ccmG NC_004757.1 834681 835205 D periplasmic protein thiol:disulfide oxidoreductase DsbE 834681..835205 Nitrosomonas europaea ATCC 19718 1081707 NP_840844.1 CDS ccmH NC_004757.1 835213 835722 D cytochrome C-type biogenesis protein CcmH 835213..835722 Nitrosomonas europaea ATCC 19718 1081708 NP_840845.1 CDS cycH NC_004757.1 835719 837050 D hypothetical protein 835719..837050 Nitrosomonas europaea ATCC 19718 1081709 NP_840846.1 CDS bcp NC_004757.1 837081 837542 D bacterioferritin comigratory protein 837081..837542 Nitrosomonas europaea ATCC 19718 1081710 NP_840847.1 CDS NE0773 NC_004757.1 837591 838574 R catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase complement(837591..838574) Nitrosomonas europaea ATCC 19718 1081711 NP_840848.1 CDS NE0774 NC_004757.1 838800 840218 D Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 838800..840218 Nitrosomonas europaea ATCC 19718 1081712 NP_840849.1 CDS NE0775 NC_004757.1 840997 841830 D tRNA/rRNA methyltransferase SpoU 840997..841830 Nitrosomonas europaea ATCC 19718 1081714 NP_840850.1 CDS NE0776 NC_004757.1 841856 843214 R hypothetical protein complement(841856..843214) Nitrosomonas europaea ATCC 19718 1081715 NP_840851.1 CDS TGL2 NC_004757.1 843249 844001 R esterase/lipase/thioesterase family protein complement(843249..844001) Nitrosomonas europaea ATCC 19718 1081716 NP_840852.1 CDS argA NC_004757.1 844096 845430 R catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase complement(844096..845430) Nitrosomonas europaea ATCC 19718 1081717 NP_840853.1 CDS NE0779 NC_004757.1 845454 846212 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(845454..846212) Nitrosomonas europaea ATCC 19718 1081718 NP_840854.1 CDS NE0780 NC_004757.1 846309 846866 D hypothetical protein 846309..846866 Nitrosomonas europaea ATCC 19718 1081719 NP_840855.1 CDS NE0781 NC_004757.1 846851 847672 D myo-inositol-1(or 4)-monophosphatase 846851..847672 Nitrosomonas europaea ATCC 19718 1081720 NP_840856.1 CDS sufI NC_004757.1 847821 849440 R periplasmic cell division protein (SufI) complement(847821..849440) Nitrosomonas europaea ATCC 19718 1081721 NP_840857.1 CDS NE0783 NC_004757.1 849705 851366 D hypothetical protein 849705..851366 Nitrosomonas europaea ATCC 19718 1081722 NP_840858.1 CDS NE0784 NC_004757.1 851418 851753 D hypothetical protein 851418..851753 Nitrosomonas europaea ATCC 19718 1081723 NP_840859.1 CDS uvrB NC_004757.1 851792 853879 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(851792..853879) Nitrosomonas europaea ATCC 19718 1081724 NP_840860.1 CDS aatA NC_004757.1 853954 855147 D class-I aminotransferase 853954..855147 Nitrosomonas europaea ATCC 19718 1081725 NP_840861.1 CDS NE0787 NC_004757.1 855289 855558 R hypothetical protein complement(855289..855558) Nitrosomonas europaea ATCC 19718 1081726 NP_840862.1 CDS NE0788 NC_004757.1 857641 858021 D hypothetical protein 857641..858021 Nitrosomonas europaea ATCC 19718 1081727 NP_840863.1 CDS NE0789 NC_004757.1 858145 858840 D hypothetical protein 858145..858840 Nitrosomonas europaea ATCC 19718 1081728 NP_840864.1 CDS NE0790 NC_004757.1 858890 859366 D hypothetical protein 858890..859366 Nitrosomonas europaea ATCC 19718 1081729 NP_840865.1 CDS NE0791 NC_004757.1 859388 860776 D hypothetical protein 859388..860776 Nitrosomonas europaea ATCC 19718 1081730 NP_840866.1 CDS NE0792 NC_004757.1 860966 861499 R hypothetical protein complement(860966..861499) Nitrosomonas europaea ATCC 19718 1081731 NP_840867.1 CDS ribD NC_004757.1 861712 862803 D similar to (NC_003295) PROBABLE RIBOFLAVIN BIOSYNTHESIS BIFUNCTIONAL RIBD, evalue=1.00e-101, 52% identity; riboflavin biosynthesis bifunctional RibD 861712..862803 Nitrosomonas europaea ATCC 19718 1081732 NP_840868.1 CDS NE0794 NC_004757.1 862895 864100 D group 1 glycosyl transferase 862895..864100 Nitrosomonas europaea ATCC 19718 1081733 NP_840869.1 CDS NE0795 NC_004757.1 864253 865521 D group 1 glycosyl transferase 864253..865521 Nitrosomonas europaea ATCC 19718 1081734 NP_840870.1 CDS NE0796 NC_004757.1 865524 866879 D capsular polysaccharide biosynthesis protein CapK 865524..866879 Nitrosomonas europaea ATCC 19718 1081735 NP_840871.1 CDS NE0797 NC_004757.1 866881 867501 R hypothetical protein complement(866881..867501) Nitrosomonas europaea ATCC 19718 1081736 NP_840872.1 CDS NE0798 NC_004757.1 867782 868258 D hypothetical protein 867782..868258 Nitrosomonas europaea ATCC 19718 1081737 NP_840873.1 CDS NE0799 NC_004757.1 868346 869503 D hypothetical protein 868346..869503 Nitrosomonas europaea ATCC 19718 1081738 NP_840874.1 CDS NE0800 NC_004757.1 869553 870371 D hypothetical protein 869553..870371 Nitrosomonas europaea ATCC 19718 1081739 NP_840875.1 CDS NE0801 NC_004757.1 870390 871466 D hypothetical protein 870390..871466 Nitrosomonas europaea ATCC 19718 1081740 NP_840876.1 CDS NE0802 NC_004757.1 871463 872530 D hypothetical protein 871463..872530 Nitrosomonas europaea ATCC 19718 1081741 NP_840877.1 CDS NE0803 NC_004757.1 872532 873767 D CDP-alcohol phosphatidyltransferase 872532..873767 Nitrosomonas europaea ATCC 19718 1081742 NP_840878.1 CDS NE0804 NC_004757.1 873775 874740 D DAG-kinase catalytic domain-containing protein 873775..874740 Nitrosomonas europaea ATCC 19718 1081743 NP_840879.1 CDS NE0805 NC_004757.1 874755 875720 D hypothetical protein 874755..875720 Nitrosomonas europaea ATCC 19718 1081744 NP_840880.1 CDS NE0806 NC_004757.1 875773 876420 D hypothetical protein 875773..876420 Nitrosomonas europaea ATCC 19718 1081745 NP_840881.1 CDS NE0807 NC_004757.1 876438 876893 R hypothetical protein complement(876438..876893) Nitrosomonas europaea ATCC 19718 1081746 NP_840882.1 CDS secA NC_004757.1 877411 880140 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 877411..880140 Nitrosomonas europaea ATCC 19718 1081747 NP_840883.1 CDS NE0809 NC_004757.1 880317 880922 D Rieske iron-sulfur protein 2Fe-2S subunit 880317..880922 Nitrosomonas europaea ATCC 19718 1081748 NP_840884.1 CDS NE0810 NC_004757.1 880924 882171 D cytochrome b/b6 880924..882171 Nitrosomonas europaea ATCC 19718 1081749 NP_840885.1 CDS petC NC_004757.1 882168 882872 D cytochrome c1 882168..882872 Nitrosomonas europaea ATCC 19718 1081750 NP_840886.1 CDS sspA NC_004757.1 882921 883520 D sspA; transcription modulator protein 882921..883520 Nitrosomonas europaea ATCC 19718 1081751 NP_840887.1 CDS sspB NC_004757.1 883517 883951 D ClpXP protease specificity-enhancing factor 883517..883951 Nitrosomonas europaea ATCC 19718 1081752 NP_840888.1 CDS NE0814 NC_004757.1 884935 885978 R integrase catalytic subunit complement(884935..885978) Nitrosomonas europaea ATCC 19718 1081755 NP_840889.1 CDS NE0815 NC_004757.1 886198 886494 D hypothetical protein 886198..886494 Nitrosomonas europaea ATCC 19718 1081756 NP_840890.1 CDS NE0816 NC_004757.1 886597 888861 R TonB-dependent receptor protein complement(886597..888861) Nitrosomonas europaea ATCC 19718 1081757 NP_840891.1 CDS NE0817 NC_004757.1 889244 890248 R transmembrane sensor complement(889244..890248) Nitrosomonas europaea ATCC 19718 1081758 NP_840892.1 CDS NE0818 NC_004757.1 890344 890853 R RNA polymerase ECF-subfamily sigma-70 factor complement(890344..890853) Nitrosomonas europaea ATCC 19718 1081759 NP_840893.1 CDS NE0819 NC_004757.1 891102 891734 R hypothetical protein complement(891102..891734) Nitrosomonas europaea ATCC 19718 1081760 NP_840894.1 CDS NE0820 NC_004757.1 891960 893009 R zinc-containing alcohol dehydrogenase superfamily protein complement(891960..893009) Nitrosomonas europaea ATCC 19718 1081761 NP_840895.1 CDS NE0821 NC_004757.1 893112 893846 R hypothetical protein complement(893112..893846) Nitrosomonas europaea ATCC 19718 1081762 NP_840896.1 CDS NE0822 NC_004757.1 893830 894225 R hypothetical protein complement(893830..894225) Nitrosomonas europaea ATCC 19718 1081763 NP_840897.1 CDS NE0823 NC_004757.1 894418 896163 D hypothetical protein 894418..896163 Nitrosomonas europaea ATCC 19718 1081764 NP_840898.1 CDS NE0824 NC_004757.1 896349 896873 D hypothetical protein 896349..896873 Nitrosomonas europaea ATCC 19718 1081765 NP_840899.1 CDS NE0825 NC_004757.1 896896 898095 R hypothetical protein complement(896896..898095) Nitrosomonas europaea ATCC 19718 1081766 NP_840900.1 CDS NE0826 NC_004757.1 898104 899306 R hypothetical protein complement(898104..899306) Nitrosomonas europaea ATCC 19718 1081767 NP_840901.1 CDS NE0827 NC_004757.1 899303 899974 R ABC transporter ATPase complement(899303..899974) Nitrosomonas europaea ATCC 19718 1081768 NP_840902.1 CDS NE0828 NC_004757.1 899971 901125 R hemolysin D complement(899971..901125) Nitrosomonas europaea ATCC 19718 1081769 NP_840903.1 CDS NE0829 NC_004757.1 901146 901709 R hypothetical protein complement(901146..901709) Nitrosomonas europaea ATCC 19718 1081770 NP_840904.1 CDS NE0830 NC_004757.1 901779 903662 D DNA mismatch repair protein MutS family protein 901779..903662 Nitrosomonas europaea ATCC 19718 1081771 NP_840905.1 CDS NE0831 NC_004757.1 903725 904903 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 903725..904903 Nitrosomonas europaea ATCC 19718 1081772 NP_840906.1 CDS NE0832 NC_004757.1 904931 905410 D hypothetical protein 904931..905410 Nitrosomonas europaea ATCC 19718 1081773 NP_840907.1 CDS hrpA NC_004757.1 905417 909172 D HrpA-like helicases 905417..909172 Nitrosomonas europaea ATCC 19718 1081774 NP_840908.1 CDS NE0834 NC_004757.1 909337 911379 D DEAD/DEAH box helicase 909337..911379 Nitrosomonas europaea ATCC 19718 1081775 NP_840909.1 CDS tnpA NC_004757.1 911376 914345 R Tn3 family transposase complement(911376..914345) Nitrosomonas europaea ATCC 19718 1081776 NP_840910.1 CDS tnpR NC_004757.1 914348 914908 R site-specific recombinase complement(914348..914908) Nitrosomonas europaea ATCC 19718 1081777 NP_840911.1 CDS NE0837 NC_004757.1 915038 916024 R hypothetical protein complement(915038..916024) Nitrosomonas europaea ATCC 19718 1081778 NP_840912.1 CDS merD NC_004757.1 916254 916619 R transcriptional regulator MerD complement(916254..916619) Nitrosomonas europaea ATCC 19718 1081779 NP_840913.1 CDS merA NC_004757.1 916637 918322 R mercuric reductase complement(916637..918322) Nitrosomonas europaea ATCC 19718 1081780 NP_840914.1 CDS merC NC_004757.1 918361 918783 R mercury transport protein MerC complement(918361..918783) Nitrosomonas europaea ATCC 19718 1081781 NP_840915.1 CDS merP NC_004757.1 918812 919087 R mercury scavenger protein complement(918812..919087) Nitrosomonas europaea ATCC 19718 1081782 NP_840916.1 CDS merT NC_004757.1 919101 919451 R mercuric transport protein complement(919101..919451) Nitrosomonas europaea ATCC 19718 1081783 NP_840917.1 CDS merR NC_004757.1 919523 919948 D transcriptional regulator MerR 919523..919948 Nitrosomonas europaea ATCC 19718 1081784 NP_840918.1 CDS NE0844 NC_004757.1 919923 920549 D hypothetical protein 919923..920549 Nitrosomonas europaea ATCC 19718 1081785 NP_840919.1 CDS NE0845 NC_004757.1 920552 920842 D hypothetical protein 920552..920842 Nitrosomonas europaea ATCC 19718 1081786 NP_840920.1 CDS NE0846 NC_004757.1 921639 922223 R hypothetical protein complement(921639..922223) Nitrosomonas europaea ATCC 19718 1081787 NP_840921.1 CDS NE0847 NC_004757.1 922351 923301 R hypothetical protein complement(922351..923301) Nitrosomonas europaea ATCC 19718 1081788 NP_840922.1 CDS NE0848 NC_004757.1 923421 923873 R phosphoglycerate mutase family protein complement(923421..923873) Nitrosomonas europaea ATCC 19718 1081789 NP_840923.1 CDS NE0849 NC_004757.1 923929 924621 R nodulin 21 complement(923929..924621) Nitrosomonas europaea ATCC 19718 1081790 NP_840924.1 CDS NE0850 NC_004757.1 924637 925311 R phospholipase/carboxylesterase complement(924637..925311) Nitrosomonas europaea ATCC 19718 1081791 NP_840925.1 CDS NE0851 NC_004757.1 925390 926502 D transglutaminase-like superfamily protein 925390..926502 Nitrosomonas europaea ATCC 19718 1081792 NP_840926.1 CDS yvgQ NC_004757.1 926615 928336 R hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta complement(926615..928336) Nitrosomonas europaea ATCC 19718 1081793 NP_840927.1 CDS yvgR NC_004757.1 928345 930180 R sulfite reductase flavoprotein subunit complement(928345..930180) Nitrosomonas europaea ATCC 19718 1081794 NP_840928.1 CDS cysB NC_004757.1 930708 931664 R transcriptional regulator CysB-like protein complement(930708..931664) Nitrosomonas europaea ATCC 19718 1081795 NP_840929.1 CDS cysH NC_004757.1 931897 932595 D catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 931897..932595 Nitrosomonas europaea ATCC 19718 1081796 NP_840930.1 CDS cysD NC_004757.1 932620 933528 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 932620..933528 Nitrosomonas europaea ATCC 19718 1081797 NP_840931.1 CDS cysN NC_004757.1 933584 934855 D GTP-binding elongation factor 933584..934855 Nitrosomonas europaea ATCC 19718 1081798 NP_840932.1 CDS NE0858 NC_004757.1 934943 938494 D hypothetical protein 934943..938494 Nitrosomonas europaea ATCC 19718 1081799 NP_840933.1 CDS pntAa NC_004757.1 938615 939742 D alanine dehydrogenase and pyridine nucleotide transhydrogenase 938615..939742 Nitrosomonas europaea ATCC 19718 1081800 NP_840934.1 CDS pntAb2 NC_004757.1 939798 940106 D similar to (NC_003296) PROBABLE TRANSMEMBRANE NAD(P) TRANSHYDROGENASE (ALPHA SUBUNIT PART 2) TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] evalue=6.00e-34, 69% identity; transmembrane NAD(P) transhydrogenase (alpha subunit part 2) 939798..940106 Nitrosomonas europaea ATCC 19718 1081801 NP_840935.1 CDS pntB NC_004757.1 940107 941486 D NAD(P) transhydrogenase beta subunit 940107..941486 Nitrosomonas europaea ATCC 19718 1081802 NP_840936.1 CDS NE0862 NC_004757.1 941516 942313 R hypothetical protein complement(941516..942313) Nitrosomonas europaea ATCC 19718 1081803 NP_840937.1 CDS bfr NC_004757.1 942493 942957 R bacterioferritin complement(942493..942957) Nitrosomonas europaea ATCC 19718 1081804 NP_840938.1 CDS NE0864 NC_004757.1 943461 944492 D hypothetical protein 943461..944492 Nitrosomonas europaea ATCC 19718 1081805 NP_840939.1 CDS NE0865 NC_004757.1 944546 946081 D PAS domain-containing protein 944546..946081 Nitrosomonas europaea ATCC 19718 1081806 NP_840940.1 CDS hemH NC_004757.1 946088 946975 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(946088..946975) Nitrosomonas europaea ATCC 19718 1081807 NP_840941.1 CDS purK NC_004757.1 947005 948135 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase complement(947005..948135) Nitrosomonas europaea ATCC 19718 1081808 NP_840942.1 CDS purE NC_004757.1 948126 948623 R phosphoribosylaminoimidazole carboxylase catalytic subunit complement(948126..948623) Nitrosomonas europaea ATCC 19718 1081809 NP_840943.1 CDS exbD2 NC_004757.1 948818 949249 D biopolymer transport protein ExbD/TolR 948818..949249 Nitrosomonas europaea ATCC 19718 1081810 NP_840944.1 CDS sodB NC_004757.1 949326 949964 D manganese and iron superoxide dismutase 949326..949964 Nitrosomonas europaea ATCC 19718 1081811 NP_840945.1 CDS hisG NC_004757.1 949974 950624 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 949974..950624 Nitrosomonas europaea ATCC 19718 1081812 NP_840946.1 CDS hisD NC_004757.1 950645 951943 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 950645..951943 Nitrosomonas europaea ATCC 19718 1081813 NP_840947.1 CDS ubiH NC_004757.1 952057 953193 D aromatic-ring hydroxylase 952057..953193 Nitrosomonas europaea ATCC 19718 1081814 NP_840948.1 CDS NE0874 NC_004757.1 953350 954363 D hypothetical protein 953350..954363 Nitrosomonas europaea ATCC 19718 1081815 NP_840949.1 CDS fis NC_004757.1 954360 954602 D similar to (NC_003295) PROBABLE FACTOR-FOR-INVERSION-STIMULATION TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] evalue=3.00e-17, 50% identity; factor-for-inversion-stimulation transcription regulator protein 954360..954602 Nitrosomonas europaea ATCC 19718 1081816 NP_840950.1 CDS purH NC_004757.1 954611 956173 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 954611..956173 Nitrosomonas europaea ATCC 19718 1081817 NP_840951.1 CDS purD NC_004757.1 956175 957491 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 956175..957491 Nitrosomonas europaea ATCC 19718 1081818 NP_840952.1 CDS NE0878 NC_004757.1 957751 958056 R hypothetical protein complement(957751..958056) Nitrosomonas europaea ATCC 19718 1081819 NP_840953.1 CDS NE0879 NC_004757.1 958130 959398 D esterase/lipase/thioesterase family lipase 958130..959398 Nitrosomonas europaea ATCC 19718 1081820 NP_840954.1 CDS NE0880 NC_004757.1 959532 961472 R ATP-dependent DNA helicase-like protein complement(959532..961472) Nitrosomonas europaea ATCC 19718 1081821 NP_840955.1 CDS NE0881 NC_004757.1 961684 963855 D organic solvent tolerance transmembrane protein 961684..963855 Nitrosomonas europaea ATCC 19718 1081822 NP_840956.1 CDS surA NC_004757.1 963855 965201 D PpiC-type peptidyl-prolyl cis-trans isomerase 963855..965201 Nitrosomonas europaea ATCC 19718 1081823 NP_840957.1 CDS pdxA NC_004757.1 965254 966264 D 4-hydroxythreonine-4-phosphate dehydrogenase 965254..966264 Nitrosomonas europaea ATCC 19718 1081824 NP_840958.1 CDS ksgA NC_004757.1 966331 967104 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 966331..967104 Nitrosomonas europaea ATCC 19718 1081825 NP_840959.1 CDS ogt NC_004757.1 967127 967618 R methylated-DNA--protein-cysteine methyltransferase complement(967127..967618) Nitrosomonas europaea ATCC 19718 1081826 NP_840960.1 CDS NE0886 NC_004757.1 967814 968236 R hypothetical protein complement(967814..968236) Nitrosomonas europaea ATCC 19718 1081827 NP_840961.1 CDS NE0887 NC_004757.1 968320 968658 D hypothetical protein 968320..968658 Nitrosomonas europaea ATCC 19718 1081828 NP_840962.1 CDS NE0888 NC_004757.1 968661 969668 D hypothetical protein 968661..969668 Nitrosomonas europaea ATCC 19718 1081829 NP_840963.1 CDS NE0889 NC_004757.1 969733 970038 D similar to (NC_001399) ORF C9 [Ralstonia solanacearum], evalue=6.00e-06, 29% identity; hypothetical protein 969733..970038 Nitrosomonas europaea ATCC 19718 1081830 NP_840964.1 CDS NE0890 NC_004757.1 970118 970321 D hypothetical protein 970118..970321 Nitrosomonas europaea ATCC 19718 1081831 NP_840965.1 CDS NE0891 NC_004757.1 970704 972029 D hypothetical protein 970704..972029 Nitrosomonas europaea ATCC 19718 1081832 NP_840966.1 CDS NE0892 NC_004757.1 972087 972377 D phage gene 972087..972377 Nitrosomonas europaea ATCC 19718 1081833 NP_840967.1 CDS NE0893 NC_004757.1 972374 973360 D hypothetical protein 972374..973360 Nitrosomonas europaea ATCC 19718 1081834 NP_840968.1 CDS NE0894 NC_004757.1 973599 974033 R hypothetical protein complement(973599..974033) Nitrosomonas europaea ATCC 19718 1081835 NP_840969.1 CDS NE0895 NC_004757.1 974236 974487 D hypothetical protein 974236..974487 Nitrosomonas europaea ATCC 19718 1081836 NP_840970.1 CDS NE0896 NC_004757.1 974682 975419 D helix-hairpin-helix DNA-binding motif-containing protein 974682..975419 Nitrosomonas europaea ATCC 19718 1081837 NP_840971.1 CDS efp NC_004757.1 976038 976595 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(976038..976595) Nitrosomonas europaea ATCC 19718 1081838 NP_840972.1 CDS NE0898 NC_004757.1 976669 977811 R hypothetical protein complement(976669..977811) Nitrosomonas europaea ATCC 19718 1081839 NP_840973.1 CDS ldhA NC_004757.1 977894 978886 D Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase 977894..978886 Nitrosomonas europaea ATCC 19718 1081840 NP_840974.1 CDS NE0900 NC_004757.1 978889 979326 R hypothetical protein complement(978889..979326) Nitrosomonas europaea ATCC 19718 1081841 NP_840975.1 CDS NE0901 NC_004757.1 979354 982770 R PDZ domain-containing protein complement(979354..982770) Nitrosomonas europaea ATCC 19718 1081842 NP_840976.1 CDS NE0902 NC_004757.1 982940 984049 D periplasmic component of the Tol biopolymer transport system 982940..984049 Nitrosomonas europaea ATCC 19718 1081843 NP_840977.1 CDS NE0903 NC_004757.1 984210 985487 R cytochrome c complement(984210..985487) Nitrosomonas europaea ATCC 19718 1081844 NP_840978.1 CDS NE0904 NC_004757.1 985484 986203 R cytochrome c complement(985484..986203) Nitrosomonas europaea ATCC 19718 1081845 NP_840979.1 CDS NE0905 NC_004757.1 986283 986708 D hypothetical protein 986283..986708 Nitrosomonas europaea ATCC 19718 1081846 NP_840980.1 CDS ftsH NC_004757.1 986691 988550 R cell division protein FtsH complement(986691..988550) Nitrosomonas europaea ATCC 19718 1081847 NP_840981.1 CDS adhC1 NC_004757.1 988710 989816 D alcohol dehydrogenase class III-like protein 988710..989816 Nitrosomonas europaea ATCC 19718 1081848 NP_840982.1 CDS NE0908 NC_004757.1 989817 990695 D hydrolase oxidoreductase protein 989817..990695 Nitrosomonas europaea ATCC 19718 1081849 NP_840983.1 CDS speC NC_004757.1 990845 992020 R Orn/DAP/Arg decarboxylase family protein complement(990845..992020) Nitrosomonas europaea ATCC 19718 1081850 NP_840984.1 CDS NE0910 NC_004757.1 992515 992781 D hypothetical protein 992515..992781 Nitrosomonas europaea ATCC 19718 1081851 NP_840985.1 CDS rimO NC_004757.1 993053 994396 D catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 993053..994396 Nitrosomonas europaea ATCC 19718 1081852 NP_840986.1 CDS NE0912 NC_004757.1 994522 995295 R hypothetical protein complement(994522..995295) Nitrosomonas europaea ATCC 19718 1081853 NP_840987.1 CDS NE0913 NC_004757.1 995548 995889 D BolA-like protein 995548..995889 Nitrosomonas europaea ATCC 19718 1081854 NP_840988.1 CDS NE0914 NC_004757.1 995942 996571 D hypothetical protein 995942..996571 Nitrosomonas europaea ATCC 19718 1081855 NP_840989.1 CDS NE0915 NC_004757.1 996615 997457 D hypothetical protein 996615..997457 Nitrosomonas europaea ATCC 19718 1081856 NP_840990.1 CDS NE0916 NC_004757.1 997469 997969 D hypothetical protein 997469..997969 Nitrosomonas europaea ATCC 19718 1081857 NP_840991.1 CDS NE0917 NC_004757.1 998279 998779 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 998279..998779 Nitrosomonas europaea ATCC 19718 1081858 NP_840992.1 CDS NE0918 NC_004757.1 998776 999465 D hypothetical protein 998776..999465 Nitrosomonas europaea ATCC 19718 1081859 NP_840993.1 CDS NE0919 NC_004757.1 999579 1001864 D ABC transporter ATP-binding protein/permease 999579..1001864 Nitrosomonas europaea ATCC 19718 1081860 NP_840994.1 CDS NE0920 NC_004757.1 1001861 1002328 D hypothetical protein 1001861..1002328 Nitrosomonas europaea ATCC 19718 1081861 NP_840995.1 CDS NE0921 NC_004757.1 1002360 1002710 R hypothetical protein complement(1002360..1002710) Nitrosomonas europaea ATCC 19718 1081862 NP_840996.1 CDS cphA NC_004757.1 1003119 1005425 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 1003119..1005425 Nitrosomonas europaea ATCC 19718 1081863 NP_840997.1 CDS NE0923 NC_004757.1 1005452 1008022 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 1005452..1008022 Nitrosomonas europaea ATCC 19718 1081864 NP_840998.1 CDS aniA NC_004757.1 1008210 1009139 R multicopper oxidase type 1 complement(1008210..1009139) Nitrosomonas europaea ATCC 19718 1081865 NP_840999.1 CDS NE0925 NC_004757.1 1009158 1009553 R cytochrome c, class IC:cytochrome c, class I complement(1009158..1009553) Nitrosomonas europaea ATCC 19718 1081866 NP_841000.1 CDS NE0926 NC_004757.1 1009550 1010245 R cytochrome c, class I complement(1009550..1010245) Nitrosomonas europaea ATCC 19718 1081867 NP_841001.1 CDS pan1 NC_004757.1 1010277 1011368 R multicopper oxidase type 1 complement(1010277..1011368) Nitrosomonas europaea ATCC 19718 1081868 NP_841002.1 CDS yhdE NC_004757.1 1011569 1012024 D hypothetical protein 1011569..1012024 Nitrosomonas europaea ATCC 19718 1081869 NP_841003.1 CDS NE0929 NC_004757.1 1012021 1015995 R signal peptide protein complement(1012021..1015995) Nitrosomonas europaea ATCC 19718 1081870 NP_841004.1 CDS NE0930 NC_004757.1 1015997 1017757 R lipoprotein complement(1015997..1017757) Nitrosomonas europaea ATCC 19718 1081871 NP_841005.1 CDS NE0931 NC_004757.1 1017952 1018605 D hypothetical protein 1017952..1018605 Nitrosomonas europaea ATCC 19718 1081872 NP_841006.1 CDS NE0932 NC_004757.1 1018622 1018810 D isomerase 1018622..1018810 Nitrosomonas europaea ATCC 19718 1081873 NP_841007.1 CDS uvrC NC_004757.1 1018826 1020640 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1018826..1020640 Nitrosomonas europaea ATCC 19718 1081874 NP_841008.1 CDS NE0934 NC_004757.1 1021050 1021358 R integrase catalytic subunit complement(1021050..1021358) Nitrosomonas europaea ATCC 19718 1081875 NP_841009.1 CDS NE0935 NC_004757.1 1021355 1022083 R integrase catalytic subunit complement(1021355..1022083) Nitrosomonas europaea ATCC 19718 1081876 NP_841010.1 CDS NE0937 NC_004757.1 1023190 1023927 D response regulator 1023190..1023927 Nitrosomonas europaea ATCC 19718 1081878 NP_841011.1 CDS NE0938 NC_004757.1 1023924 1024496 D hypothetical protein 1023924..1024496 Nitrosomonas europaea ATCC 19718 1081879 NP_841012.1 CDS NE0939 NC_004757.1 1024553 1025596 R integrase catalytic subunit complement(1024553..1025596) Nitrosomonas europaea ATCC 19718 1081880 NP_841013.1 CDS NE0940 NC_004757.1 1025874 1026236 R DNA transport competence protein, ComEA complement(1025874..1026236) Nitrosomonas europaea ATCC 19718 1081881 NP_841014.1 CDS NE0941 NC_004757.1 1026940 1027494 R hypothetical protein complement(1026940..1027494) Nitrosomonas europaea ATCC 19718 1081882 NP_841015.1 CDS NE0942 NC_004757.1 1027579 1028214 R hypothetical protein complement(1027579..1028214) Nitrosomonas europaea ATCC 19718 1081883 NP_841016.1 CDS amoB1 NC_004757.1 1028378 1029640 R similar to AMMONIA MONOOXYGENASE gb|AAA66195.1| (L08050) ammonia monooxygenase, 43 kDa subunit [Nitrosomonas europaea], evalue=0.00e+00, 95% identity; ammonia monooxygenase, 43 kDa subunit complement(1028378..1029640) Nitrosomonas europaea ATCC 19718 1081884 NP_841017.1 CDS amoA1 NC_004757.1 1029642 1030472 R ammonia monooxygenase complement(1029642..1030472) Nitrosomonas europaea ATCC 19718 1081885 NP_841018.1 CDS amoC1 NC_004757.1 1030636 1031451 R similar to (AB079055) ammonia monooxygenase subunit C2 [Nitrosomonas sp. ENI-11], evalue=1e-160, 95% identity; ammonia monooxygenase subunit C2 complement(1030636..1031451) Nitrosomonas europaea ATCC 19718 1081886 NP_841019.1 CDS NE0946 NC_004757.1 1031893 1032912 D Sua5/YciO/YrdC/YwlC family protein 1031893..1032912 Nitrosomonas europaea ATCC 19718 1081887 NP_841020.1 CDS cbbY NC_004757.1 1032928 1033677 D InterPro IPR001454 Haloacid dehalogenase/epoxide hydrolase family; COG0637 Predicted phosphatase/phosphohexomutase; hydrolase family protein 1032928..1033677 Nitrosomonas europaea ATCC 19718 1081888 NP_841021.1 CDS NE0948 NC_004757.1 1033717 1034691 R LysM domain-containing protein complement(1033717..1034691) Nitrosomonas europaea ATCC 19718 1081889 NP_841022.1 CDS NE0949 NC_004757.1 1034799 1035467 R pimt: protein-L-isoaspartate O-methyltransferase complement(1034799..1035467) Nitrosomonas europaea ATCC 19718 1081890 NP_841023.1 CDS surE NC_004757.1 1035582 1036325 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(1035582..1036325) Nitrosomonas europaea ATCC 19718 1081891 NP_841024.1 CDS NE0951 NC_004757.1 1036708 1037100 R MerR family transcriptional regulator complement(1036708..1037100) Nitrosomonas europaea ATCC 19718 1081893 NP_841025.1 CDS ihfA NC_004757.1 1037078 1037386 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(1037078..1037386) Nitrosomonas europaea ATCC 19718 1081894 NP_841026.1 CDS pheT NC_004757.1 1037437 1039803 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(1037437..1039803) Nitrosomonas europaea ATCC 19718 1081895 NP_841027.1 CDS pheS NC_004757.1 1039822 1040859 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(1039822..1040859) Nitrosomonas europaea ATCC 19718 1081896 NP_841028.1 CDS rplT NC_004757.1 1040928 1041287 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(1040928..1041287) Nitrosomonas europaea ATCC 19718 1081897 NP_841029.1 CDS rpmI NC_004757.1 1041299 1041496 R 50S ribosomal protein L35 complement(1041299..1041496) Nitrosomonas europaea ATCC 19718 1081898 NP_841030.1 CDS infC NC_004757.1 1041621 1042115 R initiation factor 3 complement(1041621..1042115) Nitrosomonas europaea ATCC 19718 1081899 NP_841031.1 CDS thrS NC_004757.1 1042241 1044148 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(1042241..1044148) Nitrosomonas europaea ATCC 19718 1081900 NP_841032.1 CDS cycX3 NC_004757.1 1044459 1045160 R tetraheme c-cytochrome complement(1044459..1045160) Nitrosomonas europaea ATCC 19718 1081901 NP_841033.1 CDS cycA3 NC_004757.1 1045163 1045870 R similar to Cytochrome c-554 precursor (C554) (Hydroxylamine oxidoreductase-linked cytochrome) pir||A59036 cytochrome c554, tetraheme, precursor - Nitrosomonas europaea; cytochrome c-554 complement(1045163..1045870) Nitrosomonas europaea ATCC 19718 1081902 NP_841034.1 CDS NE0961 NC_004757.1 1045926 1047035 R hypothetical protein complement(1045926..1047035) Nitrosomonas europaea ATCC 19718 1081903 NP_841035.1 CDS hao2 NC_004757.1 1047032 1048744 R identical to (AB030386) hydroxylamine oxidoreductase [Nitrosomonas sp. ENI-11], evalue=0.00e+00, 100% identity; hydroxylamine oxidoreductase complement(1047032..1048744) Nitrosomonas europaea ATCC 19718 1081904 NP_841036.1 CDS mnmA NC_004757.1 1049051 1050139 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1049051..1050139 Nitrosomonas europaea ATCC 19718 1081905 NP_841037.1 CDS pilU NC_004757.1 1050142 1051278 R type II secretion system protein E complement(1050142..1051278) Nitrosomonas europaea ATCC 19718 1081906 NP_841038.1 CDS pilT NC_004757.1 1051295 1052338 R twitching mobility protein complement(1051295..1052338) Nitrosomonas europaea ATCC 19718 1081907 NP_841039.1 CDS NE0966 NC_004757.1 1052535 1053251 D hypothetical protein 1052535..1053251 Nitrosomonas europaea ATCC 19718 1081908 NP_841040.1 CDS fdx1 NC_004757.1 1053220 1053489 R 3Fe-4S ferredoxin complement(1053220..1053489) Nitrosomonas europaea ATCC 19718 1081909 NP_841041.1 CDS coaD NC_004757.1 1053509 1053988 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(1053509..1053988) Nitrosomonas europaea ATCC 19718 1081910 NP_841042.1 CDS NE0969 NC_004757.1 1053981 1054532 R N6-adenine-specific methylase complement(1053981..1054532) Nitrosomonas europaea ATCC 19718 1081911 NP_841043.1 CDS NE0970 NC_004757.1 1054542 1055846 R insulinase family protein complement(1054542..1055846) Nitrosomonas europaea ATCC 19718 1081912 NP_841044.1 CDS phnB NC_004757.1 1056001 1056420 D hypothetical protein 1056001..1056420 Nitrosomonas europaea ATCC 19718 1081913 NP_841045.1 CDS NE0972 NC_004757.1 1056451 1056849 D hypothetical protein 1056451..1056849 Nitrosomonas europaea ATCC 19718 1081914 NP_841046.1 CDS NE0973 NC_004757.1 1057024 1057683 D hypothetical protein 1057024..1057683 Nitrosomonas europaea ATCC 19718 1081915 NP_841047.1 CDS NE0974 NC_004757.1 1057892 1058239 R PemK-like protein complement(1057892..1058239) Nitrosomonas europaea ATCC 19718 1081916 NP_841048.1 CDS NE0975 NC_004757.1 1058239 1058484 R hypothetical protein complement(1058239..1058484) Nitrosomonas europaea ATCC 19718 1081917 NP_841049.1 CDS NE0976 NC_004757.1 1058875 1060161 R nitrate transport system ATP-binding protein complement(1058875..1060161) Nitrosomonas europaea ATCC 19718 1081918 NP_841050.1 CDS NE0977 NC_004757.1 1060189 1061931 R nitrate transport system permease complement(1060189..1061931) Nitrosomonas europaea ATCC 19718 1081919 NP_841051.1 CDS NE0978 NC_004757.1 1062258 1064669 R TonB-dependent receptor protein complement(1062258..1064669) Nitrosomonas europaea ATCC 19718 1081920 NP_841052.1 CDS NE0979 NC_004757.1 1064834 1065877 R transmembrane sensor complement(1064834..1065877) Nitrosomonas europaea ATCC 19718 1081921 NP_841053.1 CDS NE0980 NC_004757.1 1065883 1066386 R RNA polymerase ECF-subfamily sigma-70 factor complement(1065883..1066386) Nitrosomonas europaea ATCC 19718 1081922 NP_841054.1 CDS NE0981 NC_004757.1 1066782 1067399 R HhH-GPD complement(1066782..1067399) Nitrosomonas europaea ATCC 19718 1081923 NP_841055.1 CDS NE0982 NC_004757.1 1067680 1068126 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1067680..1068126 Nitrosomonas europaea ATCC 19718 1081924 NP_841056.1 CDS mraW NC_004757.1 1068142 1069095 D S-adenosyl-methyltransferase MraW 1068142..1069095 Nitrosomonas europaea ATCC 19718 1081925 NP_841057.1 CDS ftsL NC_004757.1 1069092 1069382 D cell division ftsL transmembrane protein 1069092..1069382 Nitrosomonas europaea ATCC 19718 1081926 NP_841058.1 CDS ftsI NC_004757.1 1069379 1071121 D penicillin binding protein transpeptidase domain-containing protein 1069379..1071121 Nitrosomonas europaea ATCC 19718 1081927 NP_841059.1 CDS murE NC_004757.1 1071118 1072683 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1071118..1072683 Nitrosomonas europaea ATCC 19718 1081928 NP_841060.1 CDS murF NC_004757.1 1072680 1074038 D UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase protein 1072680..1074038 Nitrosomonas europaea ATCC 19718 1081929 NP_841061.1 CDS mraY NC_004757.1 1074125 1075210 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1074125..1075210 Nitrosomonas europaea ATCC 19718 1081930 NP_841062.1 CDS murD NC_004757.1 1075207 1076622 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1075207..1076622 Nitrosomonas europaea ATCC 19718 1081931 NP_841063.1 CDS ftsW NC_004757.1 1076627 1077793 D cell cycle proteins 1076627..1077793 Nitrosomonas europaea ATCC 19718 1081932 NP_841064.1 CDS murG NC_004757.1 1077858 1078931 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1077858..1078931 Nitrosomonas europaea ATCC 19718 1081933 NP_841065.1 CDS murC NC_004757.1 1078921 1080342 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1078921..1080342 Nitrosomonas europaea ATCC 19718 1081934 NP_841066.1 CDS murB NC_004757.1 1080353 1081348 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1080353..1081348 Nitrosomonas europaea ATCC 19718 1081935 NP_841067.1 CDS ddl NC_004757.1 1081345 1082262 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 1081345..1082262 Nitrosomonas europaea ATCC 19718 1081936 NP_841068.1 CDS ftsQ NC_004757.1 1082349 1083140 D cell division transmembrane protein 1082349..1083140 Nitrosomonas europaea ATCC 19718 1081937 NP_841069.1 CDS ftsA NC_004757.1 1083137 1084375 D cell division protein FtsA 1083137..1084375 Nitrosomonas europaea ATCC 19718 1081938 NP_841070.1 CDS ftsZ NC_004757.1 1084445 1085593 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1084445..1085593 Nitrosomonas europaea ATCC 19718 1081939 NP_841071.1 CDS NE0998 NC_004757.1 1085754 1085996 R hypothetical protein complement(1085754..1085996) Nitrosomonas europaea ATCC 19718 1081940 NP_841072.1 CDS NE0999 NC_004757.1 1086200 1087129 D phosphate transport system permease protein 1086200..1087129 Nitrosomonas europaea ATCC 19718 1081941 NP_841073.1 CDS NE1000 NC_004757.1 1087135 1088070 D phosphate permease component of ATP-dependent phosphate uptake system 1087135..1088070 Nitrosomonas europaea ATCC 19718 1081942 NP_841074.1 CDS pstB NC_004757.1 1088080 1088880 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 1088080..1088880 Nitrosomonas europaea ATCC 19718 1081943 NP_841075.1 CDS acnA1 NC_004757.1 1089057 1091903 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(1089057..1091903) Nitrosomonas europaea ATCC 19718 1081944 NP_841076.1 CDS NE1003 NC_004757.1 1092047 1092952 D aldose 1-epimerase 1092047..1092952 Nitrosomonas europaea ATCC 19718 1081945 NP_841077.1 CDS NE1004 NC_004757.1 1092993 1093550 D hypothetical protein 1092993..1093550 Nitrosomonas europaea ATCC 19718 1081946 NP_841078.1 CDS argB NC_004757.1 1093776 1094663 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(1093776..1094663) Nitrosomonas europaea ATCC 19718 1081947 NP_841079.1 CDS pilI NC_004757.1 1094754 1095266 R chemotaxis protein CheW complement(1094754..1095266) Nitrosomonas europaea ATCC 19718 1081948 NP_841080.1 CDS pilH NC_004757.1 1095273 1095638 R response regulator receiver domain-containing protein complement(1095273..1095638) Nitrosomonas europaea ATCC 19718 1081949 NP_841081.1 CDS NE1008 NC_004757.1 1095933 1096517 D hypothetical protein 1095933..1096517 Nitrosomonas europaea ATCC 19718 1081950 NP_841082.1 CDS NE1009 NC_004757.1 1096562 1097929 D D-lactate dehydrogenase 1096562..1097929 Nitrosomonas europaea ATCC 19718 1081951 NP_841083.1 CDS ctaB NC_004757.1 1098002 1098898 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(1098002..1098898) Nitrosomonas europaea ATCC 19718 1081952 NP_841084.1 CDS NE1011 NC_004757.1 1099007 1099588 R transmembrane protein complement(1099007..1099588) Nitrosomonas europaea ATCC 19718 1081953 NP_841085.1 CDS NE1012 NC_004757.1 1099563 1100282 R SURF1 family protein complement(1099563..1100282) Nitrosomonas europaea ATCC 19718 1081954 NP_841086.1 CDS coxC NC_004757.1 1100390 1101235 R cytochrome c oxidase subunit III complement(1100390..1101235) Nitrosomonas europaea ATCC 19718 1081955 NP_841087.1 CDS NE1014 NC_004757.1 1101260 1101502 R transmembrane protein complement(1101260..1101502) Nitrosomonas europaea ATCC 19718 1081956 NP_841088.1 CDS ctaG NC_004757.1 1101508 1102032 R involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein complement(1101508..1102032) Nitrosomonas europaea ATCC 19718 1081957 NP_841089.1 CDS coxA NC_004757.1 1102158 1103735 R cytochrome c oxidase subunit I complement(1102158..1103735) Nitrosomonas europaea ATCC 19718 1081958 NP_841090.1 CDS coxB NC_004757.1 1103790 1104632 R cytochrome C oxidase polypeptide II (cytochrome AA3 subunit 2) transmembrane protein CoxB complement(1103790..1104632) Nitrosomonas europaea ATCC 19718 1081959 NP_841091.1 CDS NE1018 NC_004757.1 1105100 1105795 D hypothetical protein 1105100..1105795 Nitrosomonas europaea ATCC 19718 1081960 NP_841092.1 CDS copA NC_004757.1 1105866 1108214 D copA; copper-transporting ATPase 1105866..1108214 Nitrosomonas europaea ATCC 19718 1081961 NP_841093.1 CDS NE1020 NC_004757.1 1108201 1108455 D heavy metal-binding domain-containing protein 1108201..1108455 Nitrosomonas europaea ATCC 19718 1081962 NP_841094.1 CDS accA NC_004757.1 1108610 1109578 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1108610..1109578 Nitrosomonas europaea ATCC 19718 1081963 NP_841095.1 CDS NE1022 NC_004757.1 1109547 1110923 D hypothetical protein 1109547..1110923 Nitrosomonas europaea ATCC 19718 1081964 NP_841096.1 CDS rfbD NC_004757.1 1110979 1111893 D dTDP-4-dehydrorhamnose reductase 1110979..1111893 Nitrosomonas europaea ATCC 19718 1081965 NP_841097.1 CDS NE1024 NC_004757.1 1111913 1112866 R U7 family peptidase complement(1111913..1112866) Nitrosomonas europaea ATCC 19718 1081966 NP_841098.1 CDS NE1025 NC_004757.1 1112895 1113557 R outer membrane protein complement(1112895..1113557) Nitrosomonas europaea ATCC 19718 1081967 NP_841099.1 CDS NE1026 NC_004757.1 1113712 1114545 R hypothetical protein complement(1113712..1114545) Nitrosomonas europaea ATCC 19718 1081968 NP_841100.1 CDS NE1027 NC_004757.1 1114709 1115584 D esterase/lipase/thioesterase family protein 1114709..1115584 Nitrosomonas europaea ATCC 19718 1081969 NP_841101.1 CDS NE1028 NC_004757.1 1115622 1116068 D universal stress protein 1115622..1116068 Nitrosomonas europaea ATCC 19718 1081970 NP_841102.1 CDS NE1029 NC_004757.1 1116258 1117289 D solute-binding family 1 protein 1116258..1117289 Nitrosomonas europaea ATCC 19718 1081971 NP_841103.1 CDS NE1030 NC_004757.1 1117425 1118984 D iron transport system permease 1117425..1118984 Nitrosomonas europaea ATCC 19718 1081972 NP_841104.1 CDS NE1031 NC_004757.1 1118992 1120062 D iron transport system ATP-binding protein 1118992..1120062 Nitrosomonas europaea ATCC 19718 1081973 NP_841105.1 CDS NE1032 NC_004757.1 1120085 1120405 D hypothetical protein 1120085..1120405 Nitrosomonas europaea ATCC 19718 1081974 NP_841106.1 CDS mltB2 NC_004757.1 1120428 1121486 R membrane-bound lytic transglycosylase complement(1120428..1121486) Nitrosomonas europaea ATCC 19718 1081975 NP_841107.1 CDS trxA NC_004757.1 1122055 1122381 D thioredoxin 1122055..1122381 Nitrosomonas europaea ATCC 19718 1081976 NP_841108.1 CDS rho NC_004757.1 1122604 1123863 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1122604..1123863 Nitrosomonas europaea ATCC 19718 1081977 NP_841109.1 CDS rpmE NC_004757.1 1124143 1124367 D RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1124143..1124367 Nitrosomonas europaea ATCC 19718 1081978 NP_841110.1 CDS NE1041 NC_004757.1 1128429 1128902 R ECF subfamily RNA polymerase sigma-70 factor complement(1128429..1128902) Nitrosomonas europaea ATCC 19718 1081983 NP_841111.1 CDS NE1042 NC_004757.1 1129202 1129444 R hypothetical protein complement(1129202..1129444) Nitrosomonas europaea ATCC 19718 1081984 NP_841112.1 CDS NE1043 NC_004757.1 1129516 1129797 R transmembrane protein complement(1129516..1129797) Nitrosomonas europaea ATCC 19718 1081985 NP_841113.1 CDS eno NC_004757.1 1129794 1131080 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(1129794..1131080) Nitrosomonas europaea ATCC 19718 1081986 NP_841114.1 CDS pyrG NC_004757.1 1131521 1133215 R CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(1131521..1133215) Nitrosomonas europaea ATCC 19718 1081987 NP_841115.1 CDS NE1046 NC_004757.1 1133399 1133791 D succinate dehydrogenase, cytochrome b subunit 1133399..1133791 Nitrosomonas europaea ATCC 19718 1081988 NP_841116.1 CDS sdhD NC_004757.1 1133785 1134138 D succinate dehydrogenase, cytochrome b subunit 1133785..1134138 Nitrosomonas europaea ATCC 19718 1081989 NP_841117.1 CDS sdhA NC_004757.1 1134140 1135903 D succinate dehydrogenase/fumarate reductase, flavoprotein subunits 1134140..1135903 Nitrosomonas europaea ATCC 19718 1081990 NP_841118.1 CDS NE1049 NC_004757.1 1135985 1136959 D ankyrin repeat-containing protein 1135985..1136959 Nitrosomonas europaea ATCC 19718 1081991 NP_841119.1 CDS NE1050 NC_004757.1 1136931 1137185 D hypothetical protein 1136931..1137185 Nitrosomonas europaea ATCC 19718 1081992 NP_841120.1 CDS ftsK NC_004757.1 1137182 1139485 D FtsK/SpoIIIE family protein 1137182..1139485 Nitrosomonas europaea ATCC 19718 1081993 NP_841121.1 CDS NE1052 NC_004757.1 1139545 1140165 D Outer membrane lipoprotein carrier protein LolA 1139545..1140165 Nitrosomonas europaea ATCC 19718 1081994 NP_841122.1 CDS NE1053 NC_004757.1 1140158 1141477 D recombination factor protein RarA 1140158..1141477 Nitrosomonas europaea ATCC 19718 1081995 NP_841123.1 CDS algI NC_004757.1 1141610 1143109 D alginate O-acetylation protein 1141610..1143109 Nitrosomonas europaea ATCC 19718 1081996 NP_841124.1 CDS NE1055 NC_004757.1 1143106 1144644 D hypothetical protein 1143106..1144644 Nitrosomonas europaea ATCC 19718 1081997 NP_841125.1 CDS lolD NC_004757.1 1144671 1145345 R lolD; lipoprotein releasing system ATP-binding ABC transporter complement(1144671..1145345) Nitrosomonas europaea ATCC 19718 1081998 NP_841126.1 CDS NE1057 NC_004757.1 1145338 1146585 R hypothetical protein complement(1145338..1146585) Nitrosomonas europaea ATCC 19718 1081999 NP_841127.1 CDS NE1058 NC_004757.1 1146719 1147771 R hypothetical protein complement(1146719..1147771) Nitrosomonas europaea ATCC 19718 1082000 NP_841128.1 CDS NE1059 NC_004757.1 1148265 1149236 D urea transporter 1148265..1149236 Nitrosomonas europaea ATCC 19718 1082001 NP_841129.1 CDS NE1061 NC_004757.1 1150861 1151811 R integrase catalytic subunit complement(1150861..1151811) Nitrosomonas europaea ATCC 19718 1082003 NP_841130.1 CDS NE1064 NC_004757.1 1154443 1154874 R PilT domain-containing protein complement(1154443..1154874) Nitrosomonas europaea ATCC 19718 1082006 NP_841131.1 CDS NE1065 NC_004757.1 1154871 1155119 R plasmid stability protein complement(1154871..1155119) Nitrosomonas europaea ATCC 19718 1082007 NP_841132.1 CDS NE1066 NC_004757.1 1155365 1155622 D hypothetical protein 1155365..1155622 Nitrosomonas europaea ATCC 19718 1082008 NP_841133.1 CDS NE1067 NC_004757.1 1155808 1156071 D plasmid stability-like protein 1155808..1156071 Nitrosomonas europaea ATCC 19718 1082009 NP_841134.1 CDS NE1070 NC_004757.1 1157077 1158045 R transmembrane sensor complement(1157077..1158045) Nitrosomonas europaea ATCC 19718 1082012 NP_841135.1 CDS NE1071 NC_004757.1 1158053 1158589 R ECF subfamily RNA polymerase sigma-70 factor complement(1158053..1158589) Nitrosomonas europaea ATCC 19718 1082013 NP_841136.1 CDS NE1072 NC_004757.1 1158860 1161214 R TonB-dependent receptor protein complement(1158860..1161214) Nitrosomonas europaea ATCC 19718 1082014 NP_841137.1 CDS NE1074 NC_004757.1 1161954 1162331 R hypothetical protein complement(1161954..1162331) Nitrosomonas europaea ATCC 19718 1082016 NP_841138.1 CDS NE1075 NC_004757.1 1162328 1162618 R DNA polymerase beta-like protein complement(1162328..1162618) Nitrosomonas europaea ATCC 19718 1082017 NP_841139.1 CDS NE1076 NC_004757.1 1162704 1163021 R CcdB-like protein complement(1162704..1163021) Nitrosomonas europaea ATCC 19718 1082018 NP_841140.1 CDS NE1077 NC_004757.1 1163165 1163428 R hypothetical protein complement(1163165..1163428) Nitrosomonas europaea ATCC 19718 1082019 NP_841141.1 CDS NE1078 NC_004757.1 1163597 1164640 R transmembrane sensor complement(1163597..1164640) Nitrosomonas europaea ATCC 19718 1082020 NP_841142.1 CDS NE1079 NC_004757.1 1164645 1165163 R ECF subfamily RNA polymerase sigma factor complement(1164645..1165163) Nitrosomonas europaea ATCC 19718 1082021 NP_841143.1 CDS NE1080 NC_004757.1 1165270 1166652 R Outer membrane efflux protein complement(1165270..1166652) Nitrosomonas europaea ATCC 19718 1082022 NP_841144.1 CDS NE1081 NC_004757.1 1166661 1168640 R ABC transporter ATP-binding protein/permease complement(1166661..1168640) Nitrosomonas europaea ATCC 19718 1082023 NP_841145.1 CDS NE1082 NC_004757.1 1168634 1169830 R hypothetical protein complement(1168634..1169830) Nitrosomonas europaea ATCC 19718 1082024 NP_841146.1 CDS NE1083 NC_004757.1 1169990 1170334 R hypothetical protein complement(1169990..1170334) Nitrosomonas europaea ATCC 19718 1082025 NP_841147.1 CDS NE1084 NC_004757.1 1170336 1172282 R hypothetical protein complement(1170336..1172282) Nitrosomonas europaea ATCC 19718 1082026 NP_841148.1 CDS NE1085 NC_004757.1 1172382 1173395 R transmembrane sensor complement(1172382..1173395) Nitrosomonas europaea ATCC 19718 1082027 NP_841149.1 CDS NE1086 NC_004757.1 1173454 1173966 R ECF subfamily RNA polymerase sigma-70 factor complement(1173454..1173966) Nitrosomonas europaea ATCC 19718 1082028 NP_841150.1 CDS fpvA NC_004757.1 1174250 1176751 R TonB-dependent receptor protein complement(1174250..1176751) Nitrosomonas europaea ATCC 19718 1082029 NP_841151.1 CDS NE1088 NC_004757.1 1176954 1179407 R TonB-dependent receptor protein complement(1176954..1179407) Nitrosomonas europaea ATCC 19718 1082030 NP_841152.1 CDS NE1089 NC_004757.1 1179531 1181726 R TonB-dependent receptor protein complement(1179531..1181726) Nitrosomonas europaea ATCC 19718 1082031 NP_841153.1 CDS NE1090 NC_004757.1 1182090 1182356 R hypothetical protein complement(1182090..1182356) Nitrosomonas europaea ATCC 19718 1082032 NP_841154.1 CDS NE1091 NC_004757.1 1182424 1182879 R hypothetical protein complement(1182424..1182879) Nitrosomonas europaea ATCC 19718 1082033 NP_841155.1 CDS NE1093 NC_004757.1 1184950 1186473 D IS4 family transposase 1184950..1186473 Nitrosomonas europaea ATCC 19718 1082035 NP_841156.1 CDS NE1095 NC_004757.1 1187647 1188678 R transmembrane sensor complement(1187647..1188678) Nitrosomonas europaea ATCC 19718 1082037 NP_841157.1 CDS NE1096 NC_004757.1 1188693 1189208 R ECF subfamily RNA polymerase sigma factor complement(1188693..1189208) Nitrosomonas europaea ATCC 19718 1082038 NP_841158.1 CDS NE1097 NC_004757.1 1189452 1191926 R TonB-dependent receptor protein complement(1189452..1191926) Nitrosomonas europaea ATCC 19718 1082039 NP_841159.1 CDS NE1098 NC_004757.1 1192020 1193006 R transmembrane sensor complement(1192020..1193006) Nitrosomonas europaea ATCC 19718 1082040 NP_841160.1 CDS NE1099 NC_004757.1 1193020 1193523 R ECF subfamily RNA polymerase sigma factor complement(1193020..1193523) Nitrosomonas europaea ATCC 19718 1082041 NP_841161.1 CDS NE1100 NC_004757.1 1193723 1193995 D hypothetical protein 1193723..1193995 Nitrosomonas europaea ATCC 19718 1082042 NP_841162.1 CDS NE1101 NC_004757.1 1194076 1194585 D ECF subfamily RNA polymerase sigma factor 1194076..1194585 Nitrosomonas europaea ATCC 19718 1082043 NP_841163.1 CDS NE1102 NC_004757.1 1194610 1195668 D transmembrane sensor 1194610..1195668 Nitrosomonas europaea ATCC 19718 1082044 NP_841164.1 CDS NE1103 NC_004757.1 1195700 1196194 R N-acetyltransferase GCN5 complement(1195700..1196194) Nitrosomonas europaea ATCC 19718 1082045 NP_841165.1 CDS NE1104 NC_004757.1 1196191 1196463 R hypothetical protein complement(1196191..1196463) Nitrosomonas europaea ATCC 19718 1082046 NP_841166.1 CDS NE1106 NC_004757.1 1198601 1199008 D transposase 1198601..1199008 Nitrosomonas europaea ATCC 19718 1082048 NP_841167.1 CDS NE1107 NC_004757.1 1199008 1199376 D IS4 family transposase 1199008..1199376 Nitrosomonas europaea ATCC 19718 1082049 NP_841168.1 CDS NE1109 NC_004757.1 1200249 1200530 D hypothetical protein 1200249..1200530 Nitrosomonas europaea ATCC 19718 1082051 NP_841169.1 CDS NE1110 NC_004757.1 1200543 1200899 D helix-hairpin-helix DNA-binding motif-containing protein 1200543..1200899 Nitrosomonas europaea ATCC 19718 1082052 NP_841170.1 CDS NE1111 NC_004757.1 1200892 1202304 R Outer membrane efflux protein complement(1200892..1202304) Nitrosomonas europaea ATCC 19718 1082053 NP_841171.1 CDS NE1112 NC_004757.1 1202320 1205421 R MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; multidrug efflux protein complement(1202320..1205421) Nitrosomonas europaea ATCC 19718 1082054 NP_841172.1 CDS NE1113 NC_004757.1 1205440 1206600 R MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; periplasmic multidrug efflux lipoprotein complement(1205440..1206600) Nitrosomonas europaea ATCC 19718 1082055 NP_841173.1 CDS NE1114 NC_004757.1 1206752 1207366 D TetR family regulatory protein 1206752..1207366 Nitrosomonas europaea ATCC 19718 1082056 NP_841174.1 CDS oprN NC_004757.1 1207446 1208876 D Outer membrane efflux protein 1207446..1208876 Nitrosomonas europaea ATCC 19718 1082057 NP_841175.1 CDS NE1116 NC_004757.1 1208873 1209943 D Type I antifreeze protein:hemolysin D 1208873..1209943 Nitrosomonas europaea ATCC 19718 1082058 NP_841176.1 CDS yhiH NC_004757.1 1209940 1212711 D multidrug ABC transporter ATPase 1209940..1212711 Nitrosomonas europaea ATCC 19718 1082059 NP_841177.1 CDS NE1118 NC_004757.1 1212714 1213838 D ABC transporter permease 1212714..1213838 Nitrosomonas europaea ATCC 19718 1082060 NP_841178.1 CDS NE1119 NC_004757.1 1213986 1214288 R hypothetical protein complement(1213986..1214288) Nitrosomonas europaea ATCC 19718 1082061 NP_841179.1 CDS NE1120 NC_004757.1 1214337 1214504 R hypothetical protein complement(1214337..1214504) Nitrosomonas europaea ATCC 19718 1082062 NP_841180.1 CDS NE1121 NC_004757.1 1214540 1214827 R hypothetical protein complement(1214540..1214827) Nitrosomonas europaea ATCC 19718 1082063 NP_841181.1 CDS NE1122 NC_004757.1 1215138 1215743 R hypothetical protein complement(1215138..1215743) Nitrosomonas europaea ATCC 19718 1082064 NP_841182.1 CDS NE1123 NC_004757.1 1216196 1218577 D penicillin amidase 1216196..1218577 Nitrosomonas europaea ATCC 19718 1082065 NP_841183.1 CDS NE1124 NC_004757.1 1218822 1220180 D similar to (NC_000919) response regulatory protein (atoC) [Treponema pallidum], evalue=2.00e-86, 39% identity; atoC; response regulatory protein 1218822..1220180 Nitrosomonas europaea ATCC 19718 1082066 NP_841184.1 CDS fadD NC_004757.1 1220223 1221806 D AMP-dependent synthetase and ligase 1220223..1221806 Nitrosomonas europaea ATCC 19718 1082067 NP_841185.1 CDS NE1126 NC_004757.1 1221803 1223032 D Orn/DAP/Arg decarboxylase family protein 1221803..1223032 Nitrosomonas europaea ATCC 19718 1082068 NP_841186.1 CDS asnB NC_004757.1 1223233 1225092 D asparagine synthase 1223233..1225092 Nitrosomonas europaea ATCC 19718 1082069 NP_841187.1 CDS NE1128 NC_004757.1 1225466 1226257 D hypothetical protein 1225466..1226257 Nitrosomonas europaea ATCC 19718 1082070 NP_841188.1 CDS NE1129 NC_004757.1 1226288 1226740 D hypothetical protein 1226288..1226740 Nitrosomonas europaea ATCC 19718 1082071 NP_841189.1 CDS NE1130 NC_004757.1 1226733 1227968 D hypothetical protein 1226733..1227968 Nitrosomonas europaea ATCC 19718 1082072 NP_841190.1 CDS NE1132 NC_004757.1 1230529 1230879 R transposase complement(1230529..1230879) Nitrosomonas europaea ATCC 19718 1082074 NP_841191.1 CDS NE1133 NC_004757.1 1230924 1231409 R similar to (U83995) protease [Porphyromonas gingivalis], evalue=2.00e-22, 40% identity; protease complement(1230924..1231409) Nitrosomonas europaea ATCC 19718 1082075 NP_841192.1 CDS NE1135 NC_004757.1 1231920 1232168 D hypothetical protein 1231920..1232168 Nitrosomonas europaea ATCC 19718 1082077 NP_841193.1 CDS NE1136 NC_004757.1 1232310 1232726 R hypothetical protein complement(1232310..1232726) Nitrosomonas europaea ATCC 19718 1082078 NP_841194.1 CDS holA NC_004757.1 1232727 1233797 R DNA polymerase III subunit delta complement(1232727..1233797) Nitrosomonas europaea ATCC 19718 1082079 NP_841195.1 CDS rlpB NC_004757.1 1233809 1234306 R lipoprotein B transmembrane complement(1233809..1234306) Nitrosomonas europaea ATCC 19718 1082080 NP_841196.1 CDS leuS NC_004757.1 1234324 1236933 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1234324..1236933) Nitrosomonas europaea ATCC 19718 1082081 NP_841197.1 CDS queA NC_004757.1 1237156 1238217 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1237156..1238217 Nitrosomonas europaea ATCC 19718 1082082 NP_841198.1 CDS tgt NC_004757.1 1238214 1239329 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1238214..1239329 Nitrosomonas europaea ATCC 19718 1082083 NP_841199.1 CDS NE1142 NC_004757.1 1239364 1239840 D hypothetical protein 1239364..1239840 Nitrosomonas europaea ATCC 19718 1082084 NP_841200.1 CDS secD NC_004757.1 1239915 1241762 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1239915..1241762 Nitrosomonas europaea ATCC 19718 1082085 NP_841201.1 CDS secF NC_004757.1 1241786 1242718 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1241786..1242718 Nitrosomonas europaea ATCC 19718 1082086 NP_841202.1 CDS NE1145 NC_004757.1 1242777 1243154 D hypothetical protein 1242777..1243154 Nitrosomonas europaea ATCC 19718 1082087 NP_841203.1 CDS NE1146 NC_004757.1 1243204 1243938 D ubiquinone/menaquinone biosynthesis methlytransferase UbiE 1243204..1243938 Nitrosomonas europaea ATCC 19718 1082088 NP_841204.1 CDS NE1147 NC_004757.1 1244008 1244979 R catalyzes the formation of putrescine from agmatine; agmatinase complement(1244008..1244979) Nitrosomonas europaea ATCC 19718 1082089 NP_841205.1 CDS lspA NC_004757.1 1245067 1245549 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(1245067..1245549) Nitrosomonas europaea ATCC 19718 1082090 NP_841206.1 CDS ileS NC_004757.1 1245592 1248411 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(1245592..1248411) Nitrosomonas europaea ATCC 19718 1082091 NP_841207.1 CDS ribF NC_004757.1 1248413 1249384 R cytidylyltransferase:riboflavin kinase / FAD synthetase complement(1248413..1249384) Nitrosomonas europaea ATCC 19718 1082092 NP_841208.1 CDS NE1151 NC_004757.1 1249493 1249924 R sec-independent protein translocase protein TatC complement(1249493..1249924) Nitrosomonas europaea ATCC 19718 1082093 NP_841209.1 CDS hbpA NC_004757.1 1250060 1252300 D solute-binding family 5 protein 1250060..1252300 Nitrosomonas europaea ATCC 19718 1082094 NP_841210.1 CDS appB NC_004757.1 1252318 1253295 D appB; oligopeptide ABC transporter 1252318..1253295 Nitrosomonas europaea ATCC 19718 1082095 NP_841211.1 CDS NE1154 NC_004757.1 1253429 1255096 D hypothetical protein 1253429..1255096 Nitrosomonas europaea ATCC 19718 1082096 NP_841212.1 CDS NE1155 NC_004757.1 1255144 1256088 D DnaJ N-terminal domain-containing protein 1255144..1256088 Nitrosomonas europaea ATCC 19718 1082097 NP_841213.1 CDS NE1156 NC_004757.1 1256090 1256389 D MerR family transcriptional regulator 1256090..1256389 Nitrosomonas europaea ATCC 19718 1082098 NP_841214.1 CDS NE1157 NC_004757.1 1256446 1257339 D hypothetical protein 1256446..1257339 Nitrosomonas europaea ATCC 19718 1082099 NP_841215.1 CDS NE1158 NC_004757.1 1257356 1257913 D NUDIX hydrolase 1257356..1257913 Nitrosomonas europaea ATCC 19718 1082100 NP_841216.1 CDS xseB NC_004757.1 1258933 1259202 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1258933..1259202 Nitrosomonas europaea ATCC 19718 1082103 NP_841217.1 CDS ispA NC_004757.1 1259192 1260085 D polyprenyl synthetase 1259192..1260085 Nitrosomonas europaea ATCC 19718 1082104 NP_841218.1 CDS dxs NC_004757.1 1260143 1261987 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1260143..1261987 Nitrosomonas europaea ATCC 19718 1082105 NP_841219.1 CDS NE1162 NC_004757.1 1262036 1262386 D hypothetical protein 1262036..1262386 Nitrosomonas europaea ATCC 19718 1082106 NP_841220.1 CDS NE1163 NC_004757.1 1262582 1263388 D similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase 1262582..1263388 Nitrosomonas europaea ATCC 19718 1082107 NP_841221.1 CDS NE1164 NC_004757.1 1263676 1264290 D hypothetical protein 1263676..1264290 Nitrosomonas europaea ATCC 19718 1082108 NP_841222.1 CDS NE1165 NC_004757.1 1264314 1265054 R Involved in pteridine salvage and antifolate resistance; pteridine reductase complement(1264314..1265054) Nitrosomonas europaea ATCC 19718 1082109 NP_841223.1 CDS NE1166 NC_004757.1 1265130 1266302 D hypothetical protein 1265130..1266302 Nitrosomonas europaea ATCC 19718 1082110 NP_841224.1 CDS NE1167 NC_004757.1 1266372 1267112 R purine phosphorylase family protein 1 complement(1266372..1267112) Nitrosomonas europaea ATCC 19718 1082111 NP_841225.1 CDS NE1168 NC_004757.1 1267109 1269109 R prenyltransferase and squalene oxidase repeat-containing protein complement(1267109..1269109) Nitrosomonas europaea ATCC 19718 1082112 NP_841226.1 CDS vacJ NC_004757.1 1269234 1270004 R hypothetical protein complement(1269234..1270004) Nitrosomonas europaea ATCC 19718 1082113 NP_841227.1 CDS dfrA NC_004757.1 1270057 1271103 R dihydroflavonol-4-reductase complement(1270057..1271103) Nitrosomonas europaea ATCC 19718 1082114 NP_841228.1 CDS exbB2 NC_004757.1 1271172 1271780 R MotA/TolQ/ExbB proton channel family protein complement(1271172..1271780) Nitrosomonas europaea ATCC 19718 1082115 NP_841229.1 CDS xseA NC_004757.1 1272075 1273421 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1272075..1273421 Nitrosomonas europaea ATCC 19718 1082116 NP_841230.1 CDS NE1173 NC_004757.1 1273630 1274010 D hypothetical protein 1273630..1274010 Nitrosomonas europaea ATCC 19718 1082117 NP_841231.1 CDS NE1174 NC_004757.1 1274051 1275238 D hypothetical protein 1274051..1275238 Nitrosomonas europaea ATCC 19718 1082118 NP_841232.1 CDS dsbB NC_004757.1 1275245 1275739 D disulfide bond formation protein DsbB 1275245..1275739 Nitrosomonas europaea ATCC 19718 1082119 NP_841233.1 CDS NE1176 NC_004757.1 1275767 1276555 D peptidoglycan binding domain-containing protein 1275767..1276555 Nitrosomonas europaea ATCC 19718 1082120 NP_841234.1 CDS NE1178 NC_004757.1 1277247 1278290 R integrase catalytic subunit complement(1277247..1278290) Nitrosomonas europaea ATCC 19718 1082122 NP_841235.1 CDS NE1179 NC_004757.1 1278486 1278995 R transmembrane protein complement(1278486..1278995) Nitrosomonas europaea ATCC 19718 1082123 NP_841236.1 CDS NE1180 NC_004757.1 1279067 1279312 D hypothetical protein 1279067..1279312 Nitrosomonas europaea ATCC 19718 1082124 NP_841237.1 CDS NE1181 NC_004757.1 1279373 1279714 R PemK-like protein complement(1279373..1279714) Nitrosomonas europaea ATCC 19718 1082125 NP_841238.1 CDS NE1182 NC_004757.1 1279707 1279949 R CopG family transcriptional regulator complement(1279707..1279949) Nitrosomonas europaea ATCC 19718 1082126 NP_841239.1 CDS NE1183 NC_004757.1 1280204 1282648 R serine protease complement(1280204..1282648) Nitrosomonas europaea ATCC 19718 1082127 NP_841240.1 CDS nlaB NC_004757.1 1282842 1283570 R phospholipid/glycerol acyltransferase complement(1282842..1283570) Nitrosomonas europaea ATCC 19718 1082128 NP_841241.1 CDS NE1185 NC_004757.1 1283570 1284112 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(1283570..1284112) Nitrosomonas europaea ATCC 19718 1082129 NP_841242.1 CDS glyS NC_004757.1 1284124 1286271 R glycyl-tRNA synthetase subunit beta complement(1284124..1286271) Nitrosomonas europaea ATCC 19718 1082130 NP_841243.1 CDS glyQ NC_004757.1 1286268 1287245 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(1286268..1287245) Nitrosomonas europaea ATCC 19718 1082131 NP_841244.1 CDS lnt NC_004757.1 1287247 1288740 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(1287247..1288740) Nitrosomonas europaea ATCC 19718 1082132 NP_841245.1 CDS NE1189 NC_004757.1 1288960 1289328 R hypothetical protein complement(1288960..1289328) Nitrosomonas europaea ATCC 19718 1082133 NP_841246.1 CDS fpvA NC_004757.1 1289572 1291977 R TonB-dependent receptor protein complement(1289572..1291977) Nitrosomonas europaea ATCC 19718 1082134 NP_841247.1 CDS NE1191 NC_004757.1 1292139 1293365 R transmembrane sensor complement(1292139..1293365) Nitrosomonas europaea ATCC 19718 1082135 NP_841248.1 CDS NE1192 NC_004757.1 1293487 1294014 R ECF subfamily RNA polymerase sigma factor complement(1293487..1294014) Nitrosomonas europaea ATCC 19718 1082136 NP_841249.1 CDS NE1194 NC_004757.1 1296474 1297694 R hypothetical protein complement(1296474..1297694) Nitrosomonas europaea ATCC 19718 1082138 NP_841250.1 CDS NE1195 NC_004757.1 1297688 1298482 R nitrate ABC transporter ATPase complement(1297688..1298482) Nitrosomonas europaea ATCC 19718 1082139 NP_841251.1 CDS NE1196 NC_004757.1 1298479 1299267 R ABC transporter permease complement(1298479..1299267) Nitrosomonas europaea ATCC 19718 1082140 NP_841252.1 CDS NE1197 NC_004757.1 1299264 1300259 R hypothetical protein complement(1299264..1300259) Nitrosomonas europaea ATCC 19718 1082141 NP_841253.1 CDS NE1198 NC_004757.1 1300720 1301280 D hypothetical protein 1300720..1301280 Nitrosomonas europaea ATCC 19718 1082142 NP_841254.1 CDS NE1199 NC_004757.1 1301317 1301793 R hypothetical protein complement(1301317..1301793) Nitrosomonas europaea ATCC 19718 1082143 NP_841255.1 CDS NE1200 NC_004757.1 1302050 1302400 R hypothetical protein complement(1302050..1302400) Nitrosomonas europaea ATCC 19718 1082144 NP_841256.1 CDS NE1201 NC_004757.1 1302722 1303684 R universal stress protein complement(1302722..1303684) Nitrosomonas europaea ATCC 19718 1082145 NP_841257.1 CDS NE1202 NC_004757.1 1304195 1304830 D hypothetical protein 1304195..1304830 Nitrosomonas europaea ATCC 19718 1082146 NP_841258.1 CDS NE1203 NC_004757.1 1305064 1306113 D similar to (AF145800) immunogenic 75 kDa protein PG4 [Porphyromonas gingivalis], evalue=8.00e-07, 24% identity; immunogenic 75 kDa protein PG4 1305064..1306113 Nitrosomonas europaea ATCC 19718 1082147 NP_841259.1 CDS NE1204 NC_004757.1 1306210 1307823 D hypothetical protein 1306210..1307823 Nitrosomonas europaea ATCC 19718 1082148 NP_841260.1 CDS NE1205 NC_004757.1 1307957 1310224 R TonB-dependent receptor protein complement(1307957..1310224) Nitrosomonas europaea ATCC 19718 1082149 NP_841261.1 CDS NE1206 NC_004757.1 1310341 1310817 R glutathione peroxidase complement(1310341..1310817) Nitrosomonas europaea ATCC 19718 1082150 NP_841262.1 CDS NE1207 NC_004757.1 1310848 1311408 D hexapeptide repeat-containing transferase 1310848..1311408 Nitrosomonas europaea ATCC 19718 1082151 NP_841263.1 CDS NE1208 NC_004757.1 1311771 1312805 D hypothetical protein 1311771..1312805 Nitrosomonas europaea ATCC 19718 1082152 NP_841264.1 CDS NE1209 NC_004757.1 1312807 1314579 D multidrug ABC transporter ATPase 1312807..1314579 Nitrosomonas europaea ATCC 19718 1082153 NP_841265.1 CDS NE1210 NC_004757.1 1314576 1315727 D ABC transporter permease 1314576..1315727 Nitrosomonas europaea ATCC 19718 1082154 NP_841266.1 CDS NE1211 NC_004757.1 1315734 1316858 D ABC transporter permease 1315734..1316858 Nitrosomonas europaea ATCC 19718 1082155 NP_841267.1 CDS NE1212 NC_004757.1 1317108 1318049 D PfkB family of carbohydrate kinase 1317108..1318049 Nitrosomonas europaea ATCC 19718 1082156 NP_841268.1 CDS sps NC_004757.1 1318057 1320198 D group 1 glycosyl transferase 1318057..1320198 Nitrosomonas europaea ATCC 19718 1082157 NP_841269.1 CDS ss2 NC_004757.1 1320268 1322652 D sucrose synthase:glycosyl transferase group 1 1320268..1322652 Nitrosomonas europaea ATCC 19718 1082158 NP_841270.1 CDS NE1215 NC_004757.1 1322727 1323566 D short-chain dehydrogenase/reductase 1322727..1323566 Nitrosomonas europaea ATCC 19718 1082159 NP_841271.1 CDS NE1216 NC_004757.1 1323582 1325750 R HAD family hydrolase complement(1323582..1325750) Nitrosomonas europaea ATCC 19718 1082160 NP_841272.1 CDS NE1217 NC_004757.1 1325996 1326508 D RNA polymerase ECF-subfamily sigma-70 factor 1325996..1326508 Nitrosomonas europaea ATCC 19718 1082161 NP_841273.1 CDS fecR NC_004757.1 1326587 1327552 D FecR protein 1326587..1327552 Nitrosomonas europaea ATCC 19718 1082162 NP_841274.1 CDS NE1219 NC_004757.1 1327791 1328948 R UMUC family protein complement(1327791..1328948) Nitrosomonas europaea ATCC 19718 1082163 NP_841275.1 CDS NE1222 NC_004757.1 1331070 1331819 R IS4 family transposase complement(1331070..1331819) Nitrosomonas europaea ATCC 19718 1082166 NP_841276.1 CDS NE1223 NC_004757.1 1331999 1333021 R transposase complement(1331999..1333021) Nitrosomonas europaea ATCC 19718 1082167 NP_841277.1 CDS NE1224 NC_004757.1 1333144 1333407 D hypothetical protein 1333144..1333407 Nitrosomonas europaea ATCC 19718 1082168 NP_841278.1 CDS NE1225 NC_004757.1 1333388 1333861 D hypothetical protein 1333388..1333861 Nitrosomonas europaea ATCC 19718 1082169 NP_841279.1 CDS NE1226 NC_004757.1 1333949 1334710 R hypothetical protein complement(1333949..1334710) Nitrosomonas europaea ATCC 19718 1082170 NP_841280.1 CDS NE1227 NC_004757.1 1335222 1335800 D hypothetical protein 1335222..1335800 Nitrosomonas europaea ATCC 19718 1082171 NP_841281.1 CDS NE1228 NC_004757.1 1336037 1337293 R hypothetical protein complement(1336037..1337293) Nitrosomonas europaea ATCC 19718 1082172 NP_841282.1 CDS prfB NC_004757.1 1337349 1338392 R peptide chain release factor 2 complement(1337349..1338392) Nitrosomonas europaea ATCC 19718 1082173 NP_841283.1 CDS NE1230 NC_004757.1 1338493 1339776 R hypothetical protein complement(1338493..1339776) Nitrosomonas europaea ATCC 19718 1082174 NP_841284.1 CDS NE1231 NC_004757.1 1339778 1340584 R hypothetical protein complement(1339778..1340584) Nitrosomonas europaea ATCC 19718 1082175 NP_841285.1 CDS NE1232 NC_004757.1 1340849 1342063 R hypothetical protein complement(1340849..1342063) Nitrosomonas europaea ATCC 19718 1082176 NP_841286.1 CDS NE1233 NC_004757.1 1342060 1343586 R peroxidase complement(1342060..1343586) Nitrosomonas europaea ATCC 19718 1082177 NP_841287.1 CDS NE1234 NC_004757.1 1343601 1344905 R hypothetical protein complement(1343601..1344905) Nitrosomonas europaea ATCC 19718 1082178 NP_841288.1 CDS NE1235 NC_004757.1 1344939 1345394 R hypothetical protein complement(1344939..1345394) Nitrosomonas europaea ATCC 19718 1082179 NP_841289.1 CDS NE1236 NC_004757.1 1345778 1348447 D hypothetical protein 1345778..1348447 Nitrosomonas europaea ATCC 19718 1082180 NP_841290.1 CDS NE1237 NC_004757.1 1348472 1350496 D glucose-methanol-choline oxidoreductase 1348472..1350496 Nitrosomonas europaea ATCC 19718 1082181 NP_841291.1 CDS NE1238 NC_004757.1 1350584 1353445 R oxygenase complement(1350584..1353445) Nitrosomonas europaea ATCC 19718 1082182 NP_841292.1 CDS ALOX5 NC_004757.1 1353501 1355198 R lipoxygenase complement(1353501..1355198) Nitrosomonas europaea ATCC 19718 1082183 NP_841293.1 CDS Ptgs1 NC_004757.1 1355234 1356835 R cyclooxygenase-2 complement(1355234..1356835) Nitrosomonas europaea ATCC 19718 1082184 NP_841294.1 CDS NE1241 NC_004757.1 1357006 1358508 R tyrosinase complement(1357006..1358508) Nitrosomonas europaea ATCC 19718 1082185 NP_841295.1 CDS NE1242 NC_004757.1 1358541 1358756 R hypothetical protein complement(1358541..1358756) Nitrosomonas europaea ATCC 19718 1082186 NP_841296.1 CDS NE1243 NC_004757.1 1358753 1359346 R hypothetical protein complement(1358753..1359346) Nitrosomonas europaea ATCC 19718 1082187 NP_841297.1 CDS NE1244 NC_004757.1 1359354 1360154 R hypothetical protein complement(1359354..1360154) Nitrosomonas europaea ATCC 19718 1082188 NP_841298.1 CDS NE1245 NC_004757.1 1360294 1361001 R Kazal domain-containing protein complement(1360294..1361001) Nitrosomonas europaea ATCC 19718 1082189 NP_841299.1 CDS NE1246 NC_004757.1 1361118 1361402 R hypothetical protein complement(1361118..1361402) Nitrosomonas europaea ATCC 19718 1082190 NP_841300.1 CDS NE1247 NC_004757.1 1361520 1362878 R hypothetical protein complement(1361520..1362878) Nitrosomonas europaea ATCC 19718 1082191 NP_841301.1 CDS NE1248 NC_004757.1 1363204 1363632 D hypothetical protein 1363204..1363632 Nitrosomonas europaea ATCC 19718 1082192 NP_841302.1 CDS NE1250 NC_004757.1 1363930 1369071 R two-component hybrid sensor and regulator complement(1363930..1369071) Nitrosomonas europaea ATCC 19718 1082194 NP_841303.1 CDS pilJ NC_004757.1 1369145 1371205 R chemotaxis sensory transducer protein complement(1369145..1371205) Nitrosomonas europaea ATCC 19718 1082195 NP_841304.1 CDS NE1252 NC_004757.1 1371536 1372180 R hypothetical protein complement(1371536..1372180) Nitrosomonas europaea ATCC 19718 1082196 NP_841305.1 CDS NE1253 NC_004757.1 1372183 1372563 R general secretory pathway protein I complement(1372183..1372563) Nitrosomonas europaea ATCC 19718 1082197 NP_841306.1 CDS NE1254 NC_004757.1 1372568 1372942 R general secretory pathway protein H complement(1372568..1372942) Nitrosomonas europaea ATCC 19718 1082198 NP_841307.1 CDS NE1255 NC_004757.1 1372971 1373366 R general secretion pathway protein G complement(1372971..1373366) Nitrosomonas europaea ATCC 19718 1082199 NP_841308.1 CDS NE1256 NC_004757.1 1373421 1374641 R type II secretion system protein complement(1373421..1374641) Nitrosomonas europaea ATCC 19718 1082200 NP_841309.1 CDS NE1257 NC_004757.1 1374638 1376368 R type II secretion system protein E complement(1374638..1376368) Nitrosomonas europaea ATCC 19718 1082201 NP_841310.1 CDS NE1258 NC_004757.1 1377548 1378603 R ParB-like nuclease domain-containing protein complement(1377548..1378603) Nitrosomonas europaea ATCC 19718 1082202 NP_841311.1 CDS NE1259 NC_004757.1 1378675 1379310 R hypothetical protein complement(1378675..1379310) Nitrosomonas europaea ATCC 19718 1082203 NP_841312.1 CDS NE1260 NC_004757.1 1379498 1379821 D transposase IS911 1379498..1379821 Nitrosomonas europaea ATCC 19718 1082204 NP_841313.1 CDS NE1261 NC_004757.1 1379875 1380726 D integrase catalytic subunit 1379875..1380726 Nitrosomonas europaea ATCC 19718 1082205 NP_841314.1 CDS NE1263 NC_004757.1 1382230 1383717 D hypothetical protein 1382230..1383717 Nitrosomonas europaea ATCC 19718 1082207 NP_841315.1 CDS NE1264 NC_004757.1 1383968 1385011 R integrase catalytic subunit complement(1383968..1385011) Nitrosomonas europaea ATCC 19718 1082208 NP_841316.1 CDS NE1265 NC_004757.1 1385550 1386059 R N-acetyltransferase GCN5 complement(1385550..1386059) Nitrosomonas europaea ATCC 19718 1082209 NP_841317.1 CDS NE1266 NC_004757.1 1386112 1386501 R death on curing protein complement(1386112..1386501) Nitrosomonas europaea ATCC 19718 1082210 NP_841318.1 CDS NE1268 NC_004757.1 1387552 1387758 R hypothetical protein complement(1387552..1387758) Nitrosomonas europaea ATCC 19718 1082212 NP_841319.1 CDS NE1269 NC_004757.1 1387893 1388330 R hypothetical protein complement(1387893..1388330) Nitrosomonas europaea ATCC 19718 1082213 NP_841320.1 CDS NE1270 NC_004757.1 1388563 1388886 D transposase IS911 1388563..1388886 Nitrosomonas europaea ATCC 19718 1082214 NP_841321.1 CDS NE1271 NC_004757.1 1388940 1389791 D integrase catalytic subunit 1388940..1389791 Nitrosomonas europaea ATCC 19718 1082215 NP_841322.1 CDS NE1273 NC_004757.1 1390389 1391570 R hypothetical protein complement(1390389..1391570) Nitrosomonas europaea ATCC 19718 1082217 NP_841323.1 CDS NE1274 NC_004757.1 1391628 1392515 D cytochrome c, class I 1391628..1392515 Nitrosomonas europaea ATCC 19718 1082218 NP_841324.1 CDS NE1275 NC_004757.1 1392595 1393296 R hypothetical protein complement(1392595..1393296) Nitrosomonas europaea ATCC 19718 1082219 NP_841325.1 CDS NE1276 NC_004757.1 1393782 1394186 D hypothetical protein 1393782..1394186 Nitrosomonas europaea ATCC 19718 1082220 NP_841326.1 CDS NE1277 NC_004757.1 1394337 1396721 R hypothetical protein complement(1394337..1396721) Nitrosomonas europaea ATCC 19718 1082221 NP_841327.1 CDS lonA NC_004757.1 1397390 1399756 D ATP-dependent proteinase La 1397390..1399756 Nitrosomonas europaea ATCC 19718 1082222 NP_841328.1 CDS NE1279 NC_004757.1 1399817 1400224 D hypothetical protein 1399817..1400224 Nitrosomonas europaea ATCC 19718 1082223 NP_841329.1 CDS NE1280 NC_004757.1 1400383 1400709 D hypothetical protein 1400383..1400709 Nitrosomonas europaea ATCC 19718 1082224 NP_841330.1 CDS purA NC_004757.1 1400773 1402071 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(1400773..1402071) Nitrosomonas europaea ATCC 19718 1082225 NP_841331.1 CDS hisZ NC_004757.1 1402305 1403480 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(1402305..1403480) Nitrosomonas europaea ATCC 19718 1082226 NP_841332.1 CDS NE1283 NC_004757.1 1403556 1403756 R hypothetical protein complement(1403556..1403756) Nitrosomonas europaea ATCC 19718 1082227 NP_841333.1 CDS NE1284 NC_004757.1 1403875 1404753 R Band 7 protein complement(1403875..1404753) Nitrosomonas europaea ATCC 19718 1082228 NP_841334.1 CDS NE1285 NC_004757.1 1404753 1405943 R Band 7 protein complement(1404753..1405943) Nitrosomonas europaea ATCC 19718 1082229 NP_841335.1 CDS NE1286 NC_004757.1 1405949 1407139 R GTP-binding protein HflX complement(1405949..1407139) Nitrosomonas europaea ATCC 19718 1082230 NP_841336.1 CDS hfq NC_004757.1 1407129 1407383 R Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(1407129..1407383) Nitrosomonas europaea ATCC 19718 1082231 NP_841337.1 CDS phoR NC_004757.1 1407718 1409076 R sensory transduction histidine kinase complement(1407718..1409076) Nitrosomonas europaea ATCC 19718 1082232 NP_841338.1 CDS NE1289 NC_004757.1 1409159 1410184 R esterase/lipase/thioesterase family protein complement(1409159..1410184) Nitrosomonas europaea ATCC 19718 1082233 NP_841339.1 CDS proB NC_004757.1 1410232 1411353 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(1410232..1411353) Nitrosomonas europaea ATCC 19718 1082234 NP_841340.1 CDS obgE NC_004757.1 1411359 1412390 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(1411359..1412390) Nitrosomonas europaea ATCC 19718 1082235 NP_841341.1 CDS rpmA NC_004757.1 1412522 1412779 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(1412522..1412779) Nitrosomonas europaea ATCC 19718 1082236 NP_841342.1 CDS rplU NC_004757.1 1412792 1413103 R 50S ribosomal protein L21 complement(1412792..1413103) Nitrosomonas europaea ATCC 19718 1082237 NP_841343.1 CDS NE1294 NC_004757.1 1413295 1414596 D glutamate--cysteine ligase 1413295..1414596 Nitrosomonas europaea ATCC 19718 1082238 NP_841344.1 CDS gshB NC_004757.1 1414596 1415558 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 1414596..1415558 Nitrosomonas europaea ATCC 19718 1082239 NP_841345.1 CDS NE1296 NC_004757.1 1415582 1416331 R cAMP-dependent protein kinase complement(1415582..1416331) Nitrosomonas europaea ATCC 19718 1082240 NP_841346.1 CDS NE1297 NC_004757.1 1416385 1416804 R hypothetical protein complement(1416385..1416804) Nitrosomonas europaea ATCC 19718 1082241 NP_841347.1 CDS NE1298 NC_004757.1 1416818 1420315 R hypothetical protein complement(1416818..1420315) Nitrosomonas europaea ATCC 19718 1082242 NP_841348.1 CDS NE1299 NC_004757.1 1420456 1422735 R guanylate cyclase complement(1420456..1422735) Nitrosomonas europaea ATCC 19718 1082243 NP_841349.1 CDS NE1300 NC_004757.1 1423064 1423339 R hypothetical protein complement(1423064..1423339) Nitrosomonas europaea ATCC 19718 1082244 NP_841350.1 CDS NE1301 NC_004757.1 1423652 1424122 D hypothetical protein 1423652..1424122 Nitrosomonas europaea ATCC 19718 1082245 NP_841351.1 CDS NE1302 NC_004757.1 1424274 1425371 R transposase complement(1424274..1425371) Nitrosomonas europaea ATCC 19718 1082246 NP_841352.1 CDS NE1303 NC_004757.1 1425501 1425992 D hypothetical protein 1425501..1425992 Nitrosomonas europaea ATCC 19718 1082247 NP_841353.1 CDS NE1304 NC_004757.1 1426056 1426358 R transcriptional regulator LacI complement(1426056..1426358) Nitrosomonas europaea ATCC 19718 1082248 NP_841354.1 CDS NE1305 NC_004757.1 1426371 1426649 R proteic killer suppression protein complement(1426371..1426649) Nitrosomonas europaea ATCC 19718 1082249 NP_841355.1 CDS NE1306 NC_004757.1 1426777 1427103 R hypothetical protein complement(1426777..1427103) Nitrosomonas europaea ATCC 19718 1082250 NP_841356.1 CDS NE1307 NC_004757.1 1427100 1427432 R hypothetical protein complement(1427100..1427432) Nitrosomonas europaea ATCC 19718 1082251 NP_841357.1 CDS NE1308 NC_004757.1 1427752 1428162 R fimbrial protein pilin: general secretion pathway protein H complement(1427752..1428162) Nitrosomonas europaea ATCC 19718 1082252 NP_841358.1 CDS NE1309 NC_004757.1 1428787 1429083 R hypothetical protein complement(1428787..1429083) Nitrosomonas europaea ATCC 19718 1082253 NP_841359.1 CDS hipA NC_004757.1 1429522 1430811 R HipA protein complement(1429522..1430811) Nitrosomonas europaea ATCC 19718 1082254 NP_841360.1 CDS NE1311 NC_004757.1 1430801 1431064 R helix-hairpin-helix DNA-binding motif-containing protein complement(1430801..1431064) Nitrosomonas europaea ATCC 19718 1082255 NP_841361.1 CDS cspD2 NC_004757.1 1431744 1431947 R cold shock DNA-binding domain-containing protein complement(1431744..1431947) Nitrosomonas europaea ATCC 19718 1082256 NP_841362.1 CDS NE1313 NC_004757.1 1432854 1433387 R response regulator receiver domain/DnaJ domain-containing protein complement(1432854..1433387) Nitrosomonas europaea ATCC 19718 1082259 NP_841363.1 CDS NE1314 NC_004757.1 1433412 1434800 R two-component sensor complement(1433412..1434800) Nitrosomonas europaea ATCC 19718 1082260 NP_841364.1 CDS ccp NC_004757.1 1434927 1435931 R cytochrome c551 peroxidase complement(1434927..1435931) Nitrosomonas europaea ATCC 19718 1082261 NP_841365.1 CDS NE1316 NC_004757.1 1436035 1436598 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(1436035..1436598) Nitrosomonas europaea ATCC 19718 1082262 NP_841366.1 CDS proS NC_004757.1 1436837 1438543 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1436837..1438543 Nitrosomonas europaea ATCC 19718 1082263 NP_841367.1 CDS NE1318 NC_004757.1 1438531 1439124 D SLT domain-containing protein 1438531..1439124 Nitrosomonas europaea ATCC 19718 1082264 NP_841368.1 CDS NE1319 NC_004757.1 1439142 1439603 R thioredoxin complement(1439142..1439603) Nitrosomonas europaea ATCC 19718 1082265 NP_841369.1 CDS leuA1 NC_004757.1 1439777 1441309 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(1439777..1441309) Nitrosomonas europaea ATCC 19718 1082266 NP_841370.1 CDS pssA NC_004757.1 1441548 1442327 R pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(1441548..1442327) Nitrosomonas europaea ATCC 19718 1082267 NP_841371.1 CDS psd NC_004757.1 1442357 1443007 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(1442357..1443007) Nitrosomonas europaea ATCC 19718 1082268 NP_841372.1 CDS ilvC NC_004757.1 1443012 1444028 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(1443012..1444028) Nitrosomonas europaea ATCC 19718 1082269 NP_841373.1 CDS ilvH NC_004757.1 1444124 1444615 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(1444124..1444615) Nitrosomonas europaea ATCC 19718 1082270 NP_841374.1 CDS ilvI NC_004757.1 1444620 1446323 R thiamine pyrophosphate dependent enzyme complement(1444620..1446323) Nitrosomonas europaea ATCC 19718 1082271 NP_841375.1 CDS tldD NC_004757.1 1446639 1448093 R modulator of DNA gyrase complement(1446639..1448093) Nitrosomonas europaea ATCC 19718 1082272 NP_841376.1 CDS NE1327 NC_004757.1 1448200 1449063 R carbon-nitrogen hydrolase complement(1448200..1449063) Nitrosomonas europaea ATCC 19718 1082273 NP_841377.1 CDS NE1328 NC_004757.1 1449291 1453163 R transmembrane protein complement(1449291..1453163) Nitrosomonas europaea ATCC 19718 1082274 NP_841378.1 CDS glnE NC_004757.1 1453367 1456156 D catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1453367..1456156 Nitrosomonas europaea ATCC 19718 1082275 NP_841379.1 CDS cti NC_004757.1 1456326 1458656 D cis/trans isomerase 1456326..1458656 Nitrosomonas europaea ATCC 19718 1082276 NP_841380.1 CDS ggt2 NC_004757.1 1458665 1460458 R gamma-glutamyltranspeptidase complement(1458665..1460458) Nitrosomonas europaea ATCC 19718 1082277 NP_841381.1 CDS rkpI NC_004757.1 1461134 1462672 R similar to (NC_003047) CAPSULAR POLYSACCHARIDE BIOSYNTHESIS\EXPORT TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti], evalue 1e-25, 26% identity; capsular polysaccharide biosynthesis/export transmembrane complement(1461134..1462672) Nitrosomonas europaea ATCC 19718 1082281 NP_841382.1 CDS hetN NC_004757.1 1462662 1463435 R short-chain dehydrogenase/reductase complement(1462662..1463435) Nitrosomonas europaea ATCC 19718 1082282 NP_841383.1 CDS NE1334 NC_004757.1 1463419 1464945 R glycosyl transferase family protein complement(1463419..1464945) Nitrosomonas europaea ATCC 19718 1082283 NP_841384.1 CDS ykvP NC_004757.1 1464924 1466009 R spore protein complement(1464924..1466009) Nitrosomonas europaea ATCC 19718 1082284 NP_841385.1 CDS NE1336 NC_004757.1 1466395 1467699 R group 1 glycosyl transferase complement(1466395..1467699) Nitrosomonas europaea ATCC 19718 1082285 NP_841386.1 CDS NE1337 NC_004757.1 1467696 1468652 R hypothetical protein complement(1467696..1468652) Nitrosomonas europaea ATCC 19718 1082286 NP_841387.1 CDS NE1338 NC_004757.1 1468694 1468933 R hypothetical protein complement(1468694..1468933) Nitrosomonas europaea ATCC 19718 1082287 NP_841388.1 CDS NE1339 NC_004757.1 1469525 1469815 R H-NS histone family protein complement(1469525..1469815) Nitrosomonas europaea ATCC 19718 1082288 NP_841389.1 CDS NE1340 NC_004757.1 1469837 1470079 R hypothetical protein complement(1469837..1470079) Nitrosomonas europaea ATCC 19718 1082290 NP_841390.1 CDS NE1341 NC_004757.1 1470125 1470679 R hypothetical protein complement(1470125..1470679) Nitrosomonas europaea ATCC 19718 1082291 NP_841391.1 CDS NE1342 NC_004757.1 1470676 1471773 R glycosyltransferase complement(1470676..1471773) Nitrosomonas europaea ATCC 19718 1082292 NP_841392.1 CDS udg NC_004757.1 1471770 1472942 R UDP-glucose/GDP-mannose dehydrogenase family protein complement(1471770..1472942) Nitrosomonas europaea ATCC 19718 1082293 NP_841393.1 CDS NE1344 NC_004757.1 1473509 1473787 R hypothetical protein complement(1473509..1473787) Nitrosomonas europaea ATCC 19718 1082294 NP_841394.1 CDS NE1345 NC_004757.1 1474137 1474397 R hypothetical protein complement(1474137..1474397) Nitrosomonas europaea ATCC 19718 1082295 NP_841395.1 CDS NE1346 NC_004757.1 1474400 1474708 R hypothetical protein complement(1474400..1474708) Nitrosomonas europaea ATCC 19718 1082296 NP_841396.1 CDS NE1347 NC_004757.1 1474936 1475631 D hypothetical protein 1474936..1475631 Nitrosomonas europaea ATCC 19718 1082297 NP_841397.1 CDS NE1348 NC_004757.1 1475472 1475978 D integrase catalytic subunit 1475472..1475978 Nitrosomonas europaea ATCC 19718 1082298 NP_841398.1 CDS NE1349 NC_004757.1 1476105 1476500 R hypothetical protein complement(1476105..1476500) Nitrosomonas europaea ATCC 19718 1082299 NP_841399.1 CDS NE1350 NC_004757.1 1476508 1476753 R hypothetical protein complement(1476508..1476753) Nitrosomonas europaea ATCC 19718 1082300 NP_841400.1 CDS NE1351 NC_004757.1 1477435 1478478 D integrase catalytic subunit 1477435..1478478 Nitrosomonas europaea ATCC 19718 1082301 NP_841401.1 CDS NE1352 NC_004757.1 1478535 1478795 R hypothetical protein complement(1478535..1478795) Nitrosomonas europaea ATCC 19718 1082302 NP_841402.1 CDS NE1353 NC_004757.1 1479618 1479917 D hypothetical protein 1479618..1479917 Nitrosomonas europaea ATCC 19718 1082303 NP_841403.1 CDS NE1354 NC_004757.1 1480079 1480294 R helix-hairpin-helix DNA-binding motif-containing protein complement(1480079..1480294) Nitrosomonas europaea ATCC 19718 1082304 NP_841404.1 CDS NE1355 NC_004757.1 1480914 1481234 R Cro repressor family protein complement(1480914..1481234) Nitrosomonas europaea ATCC 19718 1082305 NP_841405.1 CDS NE1356 NC_004757.1 1481227 1481562 R hypothetical protein complement(1481227..1481562) Nitrosomonas europaea ATCC 19718 1082306 NP_841406.1 CDS NE1357 NC_004757.1 1481646 1481894 D hypothetical protein 1481646..1481894 Nitrosomonas europaea ATCC 19718 1082307 NP_841407.1 CDS NE1360 NC_004757.1 1482500 1483114 R abortive phage resistance protein complement(1482500..1483114) Nitrosomonas europaea ATCC 19718 1082310 NP_841408.1 CDS NE1361 NC_004757.1 1483114 1484427 R abortive phage resistance protein complement(1483114..1484427) Nitrosomonas europaea ATCC 19718 1082311 NP_841409.1 CDS NE1362 NC_004757.1 1484709 1484984 D hypothetical protein 1484709..1484984 Nitrosomonas europaea ATCC 19718 1082312 NP_841410.1 CDS NE1363 NC_004757.1 1485388 1486110 D hypothetical protein 1485388..1486110 Nitrosomonas europaea ATCC 19718 1082313 NP_841411.1 CDS NE1364 NC_004757.1 1486124 1487182 D Appr-1-p processing enzyme 1486124..1487182 Nitrosomonas europaea ATCC 19718 1082314 NP_841412.1 CDS NE1365 NC_004757.1 1487564 1487899 D helix-hairpin-helix DNA-binding motif-containing protein 1487564..1487899 Nitrosomonas europaea ATCC 19718 1082315 NP_841413.1 CDS NE1366 NC_004757.1 1488439 1489134 D hypothetical protein 1488439..1489134 Nitrosomonas europaea ATCC 19718 1082316 NP_841414.1 CDS NE1367 NC_004757.1 1489071 1489481 D ISA0963-4 transposase 1489071..1489481 Nitrosomonas europaea ATCC 19718 1082317 NP_841415.1 CDS NE1369 NC_004757.1 1490636 1492117 R glycosyl transferase family protein complement(1490636..1492117) Nitrosomonas europaea ATCC 19718 1082319 NP_841416.1 CDS NE1370 NC_004757.1 1492130 1495783 R glycosyl transferase family protein complement(1492130..1495783) Nitrosomonas europaea ATCC 19718 1082320 NP_841417.1 CDS NE1371 NC_004757.1 1496257 1496469 D hypothetical protein 1496257..1496469 Nitrosomonas europaea ATCC 19718 1082321 NP_841418.1 CDS NE1372 NC_004757.1 1496453 1496731 D helix-hairpin-helix DNA-binding motif-containing protein 1496453..1496731 Nitrosomonas europaea ATCC 19718 1082322 NP_841419.1 CDS NE1373 NC_004757.1 1496762 1497166 R hypothetical protein complement(1496762..1497166) Nitrosomonas europaea ATCC 19718 1082323 NP_841420.1 CDS NE1374 NC_004757.1 1497153 1497386 R hypothetical protein complement(1497153..1497386) Nitrosomonas europaea ATCC 19718 1082324 NP_841421.1 CDS NE1375 NC_004757.1 1497622 1497948 D helix-hairpin-helix DNA-binding motif-containing protein 1497622..1497948 Nitrosomonas europaea ATCC 19718 1082325 NP_841422.1 CDS NE1376 NC_004757.1 1497929 1498351 D hypothetical protein 1497929..1498351 Nitrosomonas europaea ATCC 19718 1082326 NP_841423.1 CDS NE1377 NC_004757.1 1498593 1499024 D hypothetical protein 1498593..1499024 Nitrosomonas europaea ATCC 19718 1082327 NP_841424.1 CDS NE1378 NC_004757.1 1499301 1500344 R integrase catalytic subunit complement(1499301..1500344) Nitrosomonas europaea ATCC 19718 1082328 NP_841425.1 CDS NE1379 NC_004757.1 1500454 1500939 R hypothetical protein complement(1500454..1500939) Nitrosomonas europaea ATCC 19718 1082329 NP_841426.1 CDS NE1380 NC_004757.1 1500944 1501282 R hypothetical protein complement(1500944..1501282) Nitrosomonas europaea ATCC 19718 1082330 NP_841427.1 CDS NE1381 NC_004757.1 1501279 1502232 R hypothetical protein complement(1501279..1502232) Nitrosomonas europaea ATCC 19718 1082331 NP_841428.1 CDS galU1 NC_004757.1 1503153 1503857 R ADP-glucose pyrophosphorylase complement(1503153..1503857) Nitrosomonas europaea ATCC 19718 1082332 NP_841429.1 CDS galU1 NC_004757.1 1503829 1504044 R UTP--glucose-1-phosphate uridylyltransferase protein complement(1503829..1504044) Nitrosomonas europaea ATCC 19718 1082333 NP_841430.1 CDS kpsE NC_004757.1 1504395 1505561 R chain length determinant protein complement(1504395..1505561) Nitrosomonas europaea ATCC 19718 1082334 NP_841431.1 CDS rkpS NC_004757.1 1505558 1506220 R sugar ABC transporter ATPase complement(1505558..1506220) Nitrosomonas europaea ATCC 19718 1082335 NP_841432.1 CDS rkpT1 NC_004757.1 1506297 1507082 R ABC transporter complement(1506297..1507082) Nitrosomonas europaea ATCC 19718 1082336 NP_841433.1 CDS NE1387 NC_004757.1 1507125 1508315 R polysaccharide export protein complement(1507125..1508315) Nitrosomonas europaea ATCC 19718 1082337 NP_841434.1 CDS rkpG NC_004757.1 1508342 1509676 R class-I aminotransferase complement(1508342..1509676) Nitrosomonas europaea ATCC 19718 1082338 NP_841435.1 CDS rkpA NC_004757.1 1509673 1517307 R similar to (AF285636) type I polyketide synthase WcbR [Burkholderia mallei], evalue=0.00e+00, 41% identity; type I polyketide synthase WcbR complement(1509673..1517307) Nitrosomonas europaea ATCC 19718 1082339 NP_841436.1 CDS sbcD NC_004757.1 1517676 1518917 D Serine/threonine specific protein phosphatase:exonuclease SbcD 1517676..1518917 Nitrosomonas europaea ATCC 19718 1082340 NP_841437.1 CDS sbcC NC_004757.1 1520301 1523564 D ABC transporter ATPase 1520301..1523564 Nitrosomonas europaea ATCC 19718 1082342 NP_841438.1 CDS NE1397 NC_004757.1 1527334 1528857 D chemotaxis protein CheW 1527334..1528857 Nitrosomonas europaea ATCC 19718 1082347 NP_841439.1 CDS NE1398 NC_004757.1 1528877 1529620 R DNA polymerase-like protein complement(1528877..1529620) Nitrosomonas europaea ATCC 19718 1082348 NP_841440.1 CDS NE1399 NC_004757.1 1529678 1530151 R N-acetyltransferase GCN5 complement(1529678..1530151) Nitrosomonas europaea ATCC 19718 1082349 NP_841441.1 CDS yeaZ NC_004757.1 1530154 1530825 R glycoprotease complement(1530154..1530825) Nitrosomonas europaea ATCC 19718 1082350 NP_841442.1 CDS ligT NC_004757.1 1530806 1531381 R 2'-5' RNA ligase complement(1530806..1531381) Nitrosomonas europaea ATCC 19718 1082351 NP_841443.1 CDS ispF NC_004757.1 1531387 1531878 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(1531387..1531878) Nitrosomonas europaea ATCC 19718 1082352 NP_841444.1 CDS NE1403 NC_004757.1 1532074 1532421 R uroporphyrin-III C-methyltransferase complement(1532074..1532421) Nitrosomonas europaea ATCC 19718 1082353 NP_841445.1 CDS NE1404 NC_004757.1 1532476 1533150 D ABC transporter ATP-binding protein 1532476..1533150 Nitrosomonas europaea ATCC 19718 1082354 NP_841446.1 CDS NE1405 NC_004757.1 1533147 1535696 D hypothetical protein 1533147..1535696 Nitrosomonas europaea ATCC 19718 1082355 NP_841447.1 CDS NE1406 NC_004757.1 1535696 1536766 D AttH 1535696..1536766 Nitrosomonas europaea ATCC 19718 1082356 NP_841448.1 CDS NE1407 NC_004757.1 1536852 1537094 D hypothetical protein 1536852..1537094 Nitrosomonas europaea ATCC 19718 1082357 NP_841449.1 CDS NE1408 NC_004757.1 1537213 1538553 R sensory transduction histidine kinase complement(1537213..1538553) Nitrosomonas europaea ATCC 19718 1082358 NP_841450.1 CDS NE1409 NC_004757.1 1538550 1539239 R response regulator PhoP complement(1538550..1539239) Nitrosomonas europaea ATCC 19718 1082359 NP_841451.1 CDS NE1410 NC_004757.1 1539382 1539672 R hypothetical protein complement(1539382..1539672) Nitrosomonas europaea ATCC 19718 1082360 NP_841452.1 CDS amoC3 NC_004757.1 1540634 1541458 D similar to (AF073793) ammonia monooxygenase 3 subunit C [Nitrosomonas europaea], evalue=0.00e+00, 100% identity; ammonia monooxygenase 3 subunit C 1540634..1541458 Nitrosomonas europaea ATCC 19718 1082361 NP_841453.1 CDS ispD NC_004757.1 1541997 1542704 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(1541997..1542704) Nitrosomonas europaea ATCC 19718 1082362 NP_841454.1 CDS ftsX NC_004757.1 1542741 1543661 R hypothetical protein complement(1542741..1543661) Nitrosomonas europaea ATCC 19718 1082363 NP_841455.1 CDS ftsE NC_004757.1 1543658 1544320 R ABC transporter ATPase complement(1543658..1544320) Nitrosomonas europaea ATCC 19718 1082364 NP_841456.1 CDS pilA NC_004757.1 1544349 1545386 R Signal recognition particle GTPase, FtsY protein complement(1544349..1545386) Nitrosomonas europaea ATCC 19718 1082365 NP_841457.1 CDS NE1416 NC_004757.1 1545453 1546841 D insulinase family protein 1545453..1546841 Nitrosomonas europaea ATCC 19718 1082366 NP_841458.1 CDS dadX NC_004757.1 1546964 1548052 D alanine racemase 1546964..1548052 Nitrosomonas europaea ATCC 19718 1082367 NP_841459.1 CDS NE1418 NC_004757.1 1548071 1548865 R PpiC-type peptidyl-prolyl cis-trans isomerase complement(1548071..1548865) Nitrosomonas europaea ATCC 19718 1082368 NP_841460.1 CDS NE1419 NC_004757.1 1549022 1549324 R unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein complement(1549022..1549324) Nitrosomonas europaea ATCC 19718 1082369 NP_841461.1 CDS NE1420 NC_004757.1 1549438 1550592 R similar to (AB049412) rubredoxin reductase [Acinetobacter sp. M-1], evalue=7.00e-91, 47% identity; rubredoxin reductase complement(1549438..1550592) Nitrosomonas europaea ATCC 19718 1082370 NP_841462.1 CDS htpX NC_004757.1 1550895 1551776 D metalloprotease; heat shock protein HtpX 1550895..1551776 Nitrosomonas europaea ATCC 19718 1082371 NP_841463.1 CDS vacJ NC_004757.1 1551849 1552628 R lipoprotein (vacJ) transmembrane complement(1551849..1552628) Nitrosomonas europaea ATCC 19718 1082372 NP_841464.1 CDS hemL NC_004757.1 1552748 1554055 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(1552748..1554055) Nitrosomonas europaea ATCC 19718 1082373 NP_841465.1 CDS thiE NC_004757.1 1554092 1554736 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(1554092..1554736) Nitrosomonas europaea ATCC 19718 1082374 NP_841466.1 CDS thiD NC_004757.1 1554720 1555565 R phosphomethylpyrimidine kinase complement(1554720..1555565) Nitrosomonas europaea ATCC 19718 1082375 NP_841467.1 CDS NE1426 NC_004757.1 1555618 1555806 D rubredoxin:rubredoxin-type Fe(Cys)4 protein 1555618..1555806 Nitrosomonas europaea ATCC 19718 1082376 NP_841468.1 CDS gloA NC_004757.1 1555806 1556195 D gloA; lactoylglutathione lyase 1555806..1556195 Nitrosomonas europaea ATCC 19718 1082377 NP_841469.1 CDS NE1428 NC_004757.1 1556462 1556827 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 1556462..1556827 Nitrosomonas europaea ATCC 19718 1082378 NP_841470.1 CDS anmK NC_004757.1 1556832 1557923 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(1556832..1557923) Nitrosomonas europaea ATCC 19718 1082379 NP_841471.1 CDS NE1430 NC_004757.1 1557956 1559287 R M23/M37 familypeptidase complement(1557956..1559287) Nitrosomonas europaea ATCC 19718 1082380 NP_841472.1 CDS NE1431 NC_004757.1 1559381 1560610 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1559381..1560610 Nitrosomonas europaea ATCC 19718 1082381 NP_841473.1 CDS nrdR NC_004757.1 1560726 1561205 R transcriptional regulator NrdR complement(1560726..1561205) Nitrosomonas europaea ATCC 19718 1082382 NP_841474.1 CDS glyA NC_004757.1 1561233 1562483 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(1561233..1562483) Nitrosomonas europaea ATCC 19718 1082383 NP_841475.1 CDS NE1434 NC_004757.1 1562690 1563430 D coenzyme PQQ synthesis protein c 1562690..1563430 Nitrosomonas europaea ATCC 19718 1082384 NP_841476.1 CDS metR NC_004757.1 1563479 1564453 R transcription regulator LysR complement(1563479..1564453) Nitrosomonas europaea ATCC 19718 1082385 NP_841477.1 CDS metE NC_004757.1 1564554 1566830 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1564554..1566830 Nitrosomonas europaea ATCC 19718 1082386 NP_841478.1 CDS argG NC_004757.1 1567139 1568353 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(1567139..1568353) Nitrosomonas europaea ATCC 19718 1082387 NP_841479.1 CDS argF NC_004757.1 1568392 1569315 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(1568392..1569315) Nitrosomonas europaea ATCC 19718 1082388 NP_841480.1 CDS argD NC_004757.1 1569480 1570661 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(1569480..1570661) Nitrosomonas europaea ATCC 19718 1082389 NP_841481.1 CDS NE1440 NC_004757.1 1570839 1571264 R hypothetical protein complement(1570839..1571264) Nitrosomonas europaea ATCC 19718 1082390 NP_841482.1 CDS NE1441 NC_004757.1 1571310 1571552 R hypothetical protein complement(1571310..1571552) Nitrosomonas europaea ATCC 19718 1082391 NP_841483.1 CDS NE1442 NC_004757.1 1571552 1573618 R hypothetical protein complement(1571552..1573618) Nitrosomonas europaea ATCC 19718 1082392 NP_841484.1 CDS cysM NC_004757.1 1573624 1574511 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(1573624..1574511) Nitrosomonas europaea ATCC 19718 1082393 NP_841485.1 CDS NE1444 NC_004757.1 1574740 1577529 R hypothetical protein complement(1574740..1577529) Nitrosomonas europaea ATCC 19718 1082394 NP_841486.1 CDS NE1445 NC_004757.1 1578062 1578622 R nitrogen-fixing protein NifU complement(1578062..1578622) Nitrosomonas europaea ATCC 19718 1082395 NP_841487.1 CDS NE1446 NC_004757.1 1578628 1579107 R NifU-like domain-containing protein complement(1578628..1579107) Nitrosomonas europaea ATCC 19718 1082397 NP_841488.1 CDS NE1447 NC_004757.1 1579104 1580372 R aminotransferase class-V complement(1579104..1580372) Nitrosomonas europaea ATCC 19718 1082398 NP_841489.1 CDS NE1448 NC_004757.1 1580376 1581683 R hypothetical protein complement(1580376..1581683) Nitrosomonas europaea ATCC 19718 1082399 NP_841490.1 CDS ycf16 NC_004757.1 1581680 1582471 R Iron-regulated ABC transporter ATPase SufC complement(1581680..1582471) Nitrosomonas europaea ATCC 19718 1082400 NP_841491.1 CDS NE1450 NC_004757.1 1582468 1583904 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(1582468..1583904) Nitrosomonas europaea ATCC 19718 1082401 NP_841492.1 CDS NE1451 NC_004757.1 1583926 1584255 R hesB/yadR/yfhF family protein complement(1583926..1584255) Nitrosomonas europaea ATCC 19718 1082402 NP_841493.1 CDS NE1452 NC_004757.1 1584280 1584759 R hypothetical protein complement(1584280..1584759) Nitrosomonas europaea ATCC 19718 1082403 NP_841494.1 CDS NE1453 NC_004757.1 1585050 1587554 R hypothetical protein complement(1585050..1587554) Nitrosomonas europaea ATCC 19718 1082404 NP_841495.1 CDS NE1454 NC_004757.1 1587614 1588288 R ABC transporter ATPase complement(1587614..1588288) Nitrosomonas europaea ATCC 19718 1082405 NP_841496.1 CDS NE1455 NC_004757.1 1588323 1589009 D GDSL lipolytic enzyme 1588323..1589009 Nitrosomonas europaea ATCC 19718 1082406 NP_841497.1 CDS rluC NC_004757.1 1589056 1590087 R rluC; ribosomal large subunit pseudouridine synthase C complement(1589056..1590087) Nitrosomonas europaea ATCC 19718 1082407 NP_841498.1 CDS NE1457 NC_004757.1 1590529 1593090 D ribonuclease G and E 1590529..1593090 Nitrosomonas europaea ATCC 19718 1082408 NP_841499.1 CDS xerD NC_004757.1 1593227 1594183 R phage integrase domain/SAM domain-containing protein complement(1593227..1594183) Nitrosomonas europaea ATCC 19718 1082409 NP_841500.1 CDS NE1459 NC_004757.1 1594289 1595119 R transmembrane protein complement(1594289..1595119) Nitrosomonas europaea ATCC 19718 1082410 NP_841501.1 CDS ffh NC_004757.1 1595257 1596603 D Signal recognition particle GTPase ffh protein 1595257..1596603 Nitrosomonas europaea ATCC 19718 1082411 NP_841502.1 CDS NE1461 NC_004757.1 1596642 1597085 R hypothetical protein complement(1596642..1597085) Nitrosomonas europaea ATCC 19718 1082412 NP_841503.1 CDS dut NC_004757.1 1597079 1597528 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(1597079..1597528) Nitrosomonas europaea ATCC 19718 1082413 NP_841504.1 CDS dfp NC_004757.1 1597515 1598744 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(1597515..1598744) Nitrosomonas europaea ATCC 19718 1082414 NP_841505.1 CDS radC NC_004757.1 1598891 1599565 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 1598891..1599565 Nitrosomonas europaea ATCC 19718 1082415 NP_841506.1 CDS rpmB NC_004757.1 1599634 1599870 D required for 70S ribosome assembly; 50S ribosomal protein L28 1599634..1599870 Nitrosomonas europaea ATCC 19718 1082416 NP_841507.1 CDS rpmG NC_004757.1 1599908 1600063 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1599908..1600063 Nitrosomonas europaea ATCC 19718 1082417 NP_841508.1 CDS NE1467 NC_004757.1 1600138 1601334 R Fatty acid desaturase, type 2:Fatty acid desaturase, type 1 complement(1600138..1601334) Nitrosomonas europaea ATCC 19718 1082418 NP_841509.1 CDS polA NC_004757.1 1601478 1604216 R polA; DNA polymerase I protein complement(1601478..1604216) Nitrosomonas europaea ATCC 19718 1082419 NP_841510.1 CDS NE1469 NC_004757.1 1604232 1604951 D hypothetical protein 1604232..1604951 Nitrosomonas europaea ATCC 19718 1082420 NP_841511.1 CDS NE1470 NC_004757.1 1605011 1605394 D hypothetical protein 1605011..1605394 Nitrosomonas europaea ATCC 19718 1082421 NP_841512.1 CDS thrB NC_004757.1 1605478 1606428 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 1605478..1606428 Nitrosomonas europaea ATCC 19718 1082422 NP_841513.1 CDS NE1472 NC_004757.1 1606550 1607341 D transmembrane protein 1606550..1607341 Nitrosomonas europaea ATCC 19718 1082423 NP_841514.1 CDS uvrD NC_004757.1 1607429 1609663 R UvrD/REP helicase complement(1607429..1609663) Nitrosomonas europaea ATCC 19718 1082424 NP_841515.1 CDS cbbP NC_004757.1 1609724 1610593 R phosphoribulokinase complement(1609724..1610593) Nitrosomonas europaea ATCC 19718 1082425 NP_841516.1 CDS NE1475 NC_004757.1 1610710 1611504 R hypothetical protein complement(1610710..1611504) Nitrosomonas europaea ATCC 19718 1082426 NP_841517.1 CDS hemH NC_004757.1 1611604 1612698 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(1611604..1612698) Nitrosomonas europaea ATCC 19718 1082427 NP_841518.1 CDS hrcA NC_004757.1 1612723 1613739 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(1612723..1613739) Nitrosomonas europaea ATCC 19718 1082428 NP_841519.1 CDS ppnK NC_004757.1 1613957 1614847 D catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 1613957..1614847 Nitrosomonas europaea ATCC 19718 1082429 NP_841520.1 CDS recN NC_004757.1 1614853 1616538 D DNA repair protein RecN 1614853..1616538 Nitrosomonas europaea ATCC 19718 1082430 NP_841521.1 CDS NE1480 NC_004757.1 1616568 1616999 R hypothetical protein complement(1616568..1616999) Nitrosomonas europaea ATCC 19718 1082431 NP_841522.1 CDS NE1481 NC_004757.1 1616980 1617753 R hypothetical protein complement(1616980..1617753) Nitrosomonas europaea ATCC 19718 1082432 NP_841523.1 CDS argC NC_004757.1 1617850 1618878 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(1617850..1618878) Nitrosomonas europaea ATCC 19718 1082433 NP_841524.1 CDS rpsI NC_004757.1 1619020 1619412 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(1619020..1619412) Nitrosomonas europaea ATCC 19718 1082434 NP_841525.1 CDS rplM NC_004757.1 1619424 1619858 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(1619424..1619858) Nitrosomonas europaea ATCC 19718 1082435 NP_841526.1 CDS dac NC_004757.1 1620047 1621204 D D-alanyl-D-alanine carboxypeptidase 1620047..1621204 Nitrosomonas europaea ATCC 19718 1082436 NP_841527.1 CDS NE1486 NC_004757.1 1621228 1622088 D class IV aminotransferase 1621228..1622088 Nitrosomonas europaea ATCC 19718 1082437 NP_841528.1 CDS NE1487 NC_004757.1 1622098 1622361 D hypothetical protein 1622098..1622361 Nitrosomonas europaea ATCC 19718 1082438 NP_841529.1 CDS lipB NC_004757.1 1622623 1623237 D lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1622623..1623237 Nitrosomonas europaea ATCC 19718 1082439 NP_841530.1 CDS lipA NC_004757.1 1623257 1624201 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1623257..1624201 Nitrosomonas europaea ATCC 19718 1082440 NP_841531.1 CDS NE1490 NC_004757.1 1624235 1625179 R TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase complement(1624235..1625179) Nitrosomonas europaea ATCC 19718 1082441 NP_841532.1 CDS NE1491 NC_004757.1 1625318 1625782 D copper-containing oxidoreductase signal peptide protein 1625318..1625782 Nitrosomonas europaea ATCC 19718 1082442 NP_841533.1 CDS NE1492 NC_004757.1 1625779 1626306 D hypothetical protein 1625779..1626306 Nitrosomonas europaea ATCC 19718 1082443 NP_841534.1 CDS NE1493 NC_004757.1 1626308 1626799 D cytochrome c, class IC:cytochrome c, class I 1626308..1626799 Nitrosomonas europaea ATCC 19718 1082444 NP_841535.1 CDS NE1494 NC_004757.1 1627279 1628796 D hypothetical protein 1627279..1628796 Nitrosomonas europaea ATCC 19718 1082445 NP_841536.1 CDS soj NC_004757.1 1628796 1629545 D ParA family ATPase 1628796..1629545 Nitrosomonas europaea ATCC 19718 1082446 NP_841537.1 CDS NE1496 NC_004757.1 1629542 1629997 D hypothetical protein 1629542..1629997 Nitrosomonas europaea ATCC 19718 1082447 NP_841538.1 CDS NE1497 NC_004757.1 1630491 1630706 R hypothetical protein complement(1630491..1630706) Nitrosomonas europaea ATCC 19718 1082449 NP_841539.1 CDS hss NC_004757.1 1630860 1632278 D homospermidine synthase protein 1630860..1632278 Nitrosomonas europaea ATCC 19718 1082450 NP_841540.1 CDS NE1499 NC_004757.1 1632376 1632759 R hypothetical protein complement(1632376..1632759) Nitrosomonas europaea ATCC 19718 1082451 NP_841541.1 CDS NE1500 NC_004757.1 1632762 1633238 R hypothetical protein complement(1632762..1633238) Nitrosomonas europaea ATCC 19718 1082452 NP_841542.1 CDS NE1501 NC_004757.1 1633286 1633630 R hypothetical protein complement(1633286..1633630) Nitrosomonas europaea ATCC 19718 1082453 NP_841543.1 CDS NE1502 NC_004757.1 1633721 1634554 R hypothetical protein complement(1633721..1634554) Nitrosomonas europaea ATCC 19718 1082454 NP_841544.1 CDS NE1503 NC_004757.1 1634608 1635714 R Rieske iron-sulfur protein 2Fe-2S subunit complement(1634608..1635714) Nitrosomonas europaea ATCC 19718 1082455 NP_841545.1 CDS NE1504 NC_004757.1 1636101 1637483 D hypothetical protein 1636101..1637483 Nitrosomonas europaea ATCC 19718 1082456 NP_841546.1 CDS priA NC_004757.1 1637569 1639761 D priA; primosomal protein N' (replication factor Y) 1637569..1639761 Nitrosomonas europaea ATCC 19718 1082457 NP_841547.1 CDS NE1506 NC_004757.1 1639794 1640240 R universal stress protein complement(1639794..1640240) Nitrosomonas europaea ATCC 19718 1082458 NP_841548.1 CDS NE1507 NC_004757.1 1640298 1641950 R hypothetical protein complement(1640298..1641950) Nitrosomonas europaea ATCC 19718 1082459 NP_841549.1 CDS NE1508 NC_004757.1 1641958 1643091 R htra-like serine protease signal peptide protein complement(1641958..1643091) Nitrosomonas europaea ATCC 19718 1082460 NP_841550.1 CDS NE1509 NC_004757.1 1643129 1643875 D hypothetical protein 1643129..1643875 Nitrosomonas europaea ATCC 19718 1082461 NP_841551.1 CDS NE1510 NC_004757.1 1644016 1645338 D membrane-bound lytic murein transglycosylase A transmembrane protein 1644016..1645338 Nitrosomonas europaea ATCC 19718 1082462 NP_841552.1 CDS dsbC NC_004757.1 1645372 1646085 R hypothetical protein complement(1645372..1646085) Nitrosomonas europaea ATCC 19718 1082463 NP_841553.1 CDS NE1512 NC_004757.1 1646129 1647295 R ubiquinone biosynthesis hydroxylase family protein complement(1646129..1647295) Nitrosomonas europaea ATCC 19718 1082464 NP_841554.1 CDS NE1513 NC_004757.1 1647543 1647998 R hypothetical protein complement(1647543..1647998) Nitrosomonas europaea ATCC 19718 1082465 NP_841555.1 CDS NE1514 NC_004757.1 1648045 1649091 D glycine cleavage T-protein (aminomethyl transferase) 1648045..1649091 Nitrosomonas europaea ATCC 19718 1082466 NP_841556.1 CDS NE1515 NC_004757.1 1649156 1649815 R ankyrin repeat-containing protein complement(1649156..1649815) Nitrosomonas europaea ATCC 19718 1082467 NP_841557.1 CDS NE1516 NC_004757.1 1649817 1650581 R hypothetical protein complement(1649817..1650581) Nitrosomonas europaea ATCC 19718 1082468 NP_841558.1 CDS NE1517 NC_004757.1 1650652 1651134 R 6-pyruvoyl-tetrahydropterin synthase complement(1650652..1651134) Nitrosomonas europaea ATCC 19718 1082469 NP_841559.1 CDS NE1518 NC_004757.1 1651172 1652011 D hypothetical protein 1651172..1652011 Nitrosomonas europaea ATCC 19718 1082470 NP_841560.1 CDS NE1519 NC_004757.1 1652040 1652327 R hypothetical protein complement(1652040..1652327) Nitrosomonas europaea ATCC 19718 1082471 NP_841561.1 CDS NE1521 NC_004757.1 1653402 1653875 D transposase 1653402..1653875 Nitrosomonas europaea ATCC 19718 1082473 NP_841562.1 CDS NE1522 NC_004757.1 1653797 1654165 D IS4 family transposase 1653797..1654165 Nitrosomonas europaea ATCC 19718 1082474 NP_841563.1 CDS NE1523 NC_004757.1 1654581 1655624 D integrase catalytic subunit 1654581..1655624 Nitrosomonas europaea ATCC 19718 1082475 NP_841564.1 CDS NE1524 NC_004757.1 1655769 1656143 D hypothetical protein 1655769..1656143 Nitrosomonas europaea ATCC 19718 1082476 NP_841565.1 CDS NE1525 NC_004757.1 1656147 1656368 D plasmid stabilization protein ParE 1656147..1656368 Nitrosomonas europaea ATCC 19718 1082477 NP_841566.1 CDS NE1526 NC_004757.1 1656579 1656917 D hypothetical protein 1656579..1656917 Nitrosomonas europaea ATCC 19718 1082478 NP_841567.1 CDS NE1527 NC_004757.1 1656957 1658159 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1656957..1658159) Nitrosomonas europaea ATCC 19718 1082479 NP_841568.1 CDS NE1528 NC_004757.1 1658229 1660739 R 3-hydroxyacyl-CoA dehydrogenase complement(1658229..1660739) Nitrosomonas europaea ATCC 19718 1082480 NP_841569.1 CDS NE1529 NC_004757.1 1661067 1661564 R signal peptide protein complement(1661067..1661564) Nitrosomonas europaea ATCC 19718 1082481 NP_841570.1 CDS NE1530 NC_004757.1 1661561 1662799 R signal peptide protein complement(1661561..1662799) Nitrosomonas europaea ATCC 19718 1082482 NP_841571.1 CDS NE1531 NC_004757.1 1662877 1665003 R TonB-dependent receptor protein complement(1662877..1665003) Nitrosomonas europaea ATCC 19718 1082483 NP_841572.1 CDS NE1532 NC_004757.1 1665234 1667357 R TonB-dependent receptor protein complement(1665234..1667357) Nitrosomonas europaea ATCC 19718 1082484 NP_841573.1 CDS NE1533 NC_004757.1 1667659 1668963 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 complement(1667659..1668963) Nitrosomonas europaea ATCC 19718 1082485 NP_841574.1 CDS NE1534 NC_004757.1 1669151 1669285 R hypothetical protein complement(1669151..1669285) Nitrosomonas europaea ATCC 19718 1082486 NP_841575.1 CDS NE1535 NC_004757.1 1669482 1669862 R DNA polymerase beta-like protein complement(1669482..1669862) Nitrosomonas europaea ATCC 19718 1082487 NP_841576.1 CDS NE1536 NC_004757.1 1669973 1672525 R TonB-dependent receptor protein complement(1669973..1672525) Nitrosomonas europaea ATCC 19718 1082488 NP_841577.1 CDS NE1537 NC_004757.1 1672634 1673875 R BNR repeat-containing protein complement(1672634..1673875) Nitrosomonas europaea ATCC 19718 1082489 NP_841578.1 CDS NE1538 NC_004757.1 1674096 1675415 D hypothetical protein 1674096..1675415 Nitrosomonas europaea ATCC 19718 1082490 NP_841579.1 CDS NE1539 NC_004757.1 1675495 1677216 D hypothetical protein 1675495..1677216 Nitrosomonas europaea ATCC 19718 1082491 NP_841580.1 CDS NE1540 NC_004757.1 1677349 1679442 D TonB-dependent receptor protein 1677349..1679442 Nitrosomonas europaea ATCC 19718 1082492 NP_841581.1 CDS NE1541 NC_004757.1 1679562 1679759 D hypothetical protein 1679562..1679759 Nitrosomonas europaea ATCC 19718 1082493 NP_841582.1 CDS NE1542 NC_004757.1 1679912 1680655 D hypothetical protein 1679912..1680655 Nitrosomonas europaea ATCC 19718 1082494 NP_841583.1 CDS Heph NC_004757.1 1680757 1681752 D multicopper oxidase type 1 1680757..1681752 Nitrosomonas europaea ATCC 19718 1082495 NP_841584.1 CDS NE1544 NC_004757.1 1681762 1682679 R transcription regulator LysR complement(1681762..1682679) Nitrosomonas europaea ATCC 19718 1082496 NP_841585.1 CDS NE1545 NC_004757.1 1682810 1683676 D hypothetical protein 1682810..1683676 Nitrosomonas europaea ATCC 19718 1082497 NP_841586.1 CDS NE1546 NC_004757.1 1683655 1684086 D hypothetical protein 1683655..1684086 Nitrosomonas europaea ATCC 19718 1082498 NP_841587.1 CDS NE1547 NC_004757.1 1684167 1684418 R hypothetical protein complement(1684167..1684418) Nitrosomonas europaea ATCC 19718 1082499 NP_841588.1 CDS fadE NC_004757.1 1684529 1686862 D functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1684529..1686862 Nitrosomonas europaea ATCC 19718 1082500 NP_841589.1 CDS NE1549 NC_004757.1 1686859 1688697 D AMP-dependent synthetase and ligase 1686859..1688697 Nitrosomonas europaea ATCC 19718 1082501 NP_841590.1 CDS NE1550 NC_004757.1 1688817 1689293 D hypothetical protein 1688817..1689293 Nitrosomonas europaea ATCC 19718 1082502 NP_841591.1 CDS NE1551 NC_004757.1 1689298 1689594 D hypothetical protein 1689298..1689594 Nitrosomonas europaea ATCC 19718 1082503 NP_841592.1 CDS NE1552 NC_004757.1 1690373 1690741 R IS4 family transposase complement(1690373..1690741) Nitrosomonas europaea ATCC 19718 1082504 NP_841593.1 CDS NE1553 NC_004757.1 1690663 1691136 R transposase complement(1690663..1691136) Nitrosomonas europaea ATCC 19718 1082505 NP_841594.1 CDS NE1555 NC_004757.1 1691555 1692085 D hypothetical protein 1691555..1692085 Nitrosomonas europaea ATCC 19718 1082507 NP_841595.1 CDS NE1556 NC_004757.1 1692108 1692632 D hypothetical protein 1692108..1692632 Nitrosomonas europaea ATCC 19718 1082508 NP_841596.1 CDS NE1557 NC_004757.1 1692646 1693005 D transposase 1692646..1693005 Nitrosomonas europaea ATCC 19718 1082509 NP_841597.1 CDS NE1558 NC_004757.1 1693067 1693480 D transposase 1693067..1693480 Nitrosomonas europaea ATCC 19718 1082510 NP_841598.1 CDS NE1559 NC_004757.1 1693557 1693973 D hypothetical protein 1693557..1693973 Nitrosomonas europaea ATCC 19718 1082511 NP_841599.1 CDS NE1560 NC_004757.1 1694061 1694564 D hypothetical protein 1694061..1694564 Nitrosomonas europaea ATCC 19718 1082512 NP_841600.1 CDS NE1561 NC_004757.1 1694663 1694980 D hypothetical protein 1694663..1694980 Nitrosomonas europaea ATCC 19718 1082513 NP_841601.1 CDS NE1562 NC_004757.1 1695137 1695388 D hypothetical protein 1695137..1695388 Nitrosomonas europaea ATCC 19718 1082514 NP_841602.1 CDS NE1563 NC_004757.1 1695378 1695668 D hypothetical protein 1695378..1695668 Nitrosomonas europaea ATCC 19718 1082515 NP_841603.1 CDS NE1564 NC_004757.1 1695725 1696417 D hypothetical protein 1695725..1696417 Nitrosomonas europaea ATCC 19718 1082516 NP_841604.1 CDS NE1565 NC_004757.1 1696712 1698025 D hypothetical protein 1696712..1698025 Nitrosomonas europaea ATCC 19718 1082517 NP_841605.1 CDS NE1566 NC_004757.1 1698027 1699199 D hypothetical protein 1698027..1699199 Nitrosomonas europaea ATCC 19718 1082518 NP_841606.1 CDS kduD NC_004757.1 1699292 1700128 R short-chain dehydrogenase/reductase complement(1699292..1700128) Nitrosomonas europaea ATCC 19718 1082519 NP_841607.1 CDS NE1568 NC_004757.1 1700125 1701126 R oxidoreductase complement(1700125..1701126) Nitrosomonas europaea ATCC 19718 1082520 NP_841608.1 CDS neuA1 NC_004757.1 1701123 1701839 R cytidylyltransferase (CMP-NeuAc synthetase) complement(1701123..1701839) Nitrosomonas europaea ATCC 19718 1082521 NP_841609.1 CDS NE1570 NC_004757.1 1702243 1704492 D type III antifreeze protein 1702243..1704492 Nitrosomonas europaea ATCC 19718 1082522 NP_841610.1 CDS NE1571 NC_004757.1 1704666 1706081 D hypothetical protein 1704666..1706081 Nitrosomonas europaea ATCC 19718 1082523 NP_841611.1 CDS NE1572 NC_004757.1 1706215 1706961 R uroporphyrin-III C/tetrapyrrole methyltransferase complement(1706215..1706961) Nitrosomonas europaea ATCC 19718 1082524 NP_841612.1 CDS apaG NC_004757.1 1706972 1707355 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(1706972..1707355) Nitrosomonas europaea ATCC 19718 1082525 NP_841613.1 CDS NE1574 NC_004757.1 1707701 1709830 D serine protease 1707701..1709830 Nitrosomonas europaea ATCC 19718 1082526 NP_841614.1 CDS NE1575 NC_004757.1 1710027 1710614 D hypothetical protein 1710027..1710614 Nitrosomonas europaea ATCC 19718 1082527 NP_841615.1 CDS NE1576 NC_004757.1 1710797 1711057 D hypothetical protein 1710797..1711057 Nitrosomonas europaea ATCC 19718 1082528 NP_841616.1 CDS NE1577 NC_004757.1 1711067 1711363 R hypothetical protein complement(1711067..1711363) Nitrosomonas europaea ATCC 19718 1082529 NP_841617.1 CDS NE1578 NC_004757.1 1711360 1711641 R hypothetical protein complement(1711360..1711641) Nitrosomonas europaea ATCC 19718 1082530 NP_841618.1 CDS NE1579 NC_004757.1 1712013 1712351 R PemK-like protein complement(1712013..1712351) Nitrosomonas europaea ATCC 19718 1082531 NP_841619.1 CDS NE1580 NC_004757.1 1712336 1712578 R CopG family transcriptional regulator complement(1712336..1712578) Nitrosomonas europaea ATCC 19718 1082532 NP_841620.1 CDS NE1581 NC_004757.1 1712785 1713213 R PilT domain-containing protein complement(1712785..1713213) Nitrosomonas europaea ATCC 19718 1082533 NP_841621.1 CDS NE1582 NC_004757.1 1713210 1713464 R plasmid stability protein complement(1713210..1713464) Nitrosomonas europaea ATCC 19718 1082534 NP_841622.1 CDS NE1583 NC_004757.1 1714058 1714306 D hypothetical protein 1714058..1714306 Nitrosomonas europaea ATCC 19718 1082535 NP_841623.1 CDS NE1584 NC_004757.1 1714296 1714592 D hypothetical protein 1714296..1714592 Nitrosomonas europaea ATCC 19718 1082536 NP_841624.1 CDS NE1585 NC_004757.1 1714952 1715527 R IS4 family transposase complement(1714952..1715527) Nitrosomonas europaea ATCC 19718 1082537 NP_841625.1 CDS NE1586 NC_004757.1 1715332 1715700 R transposase complement(1715332..1715700) Nitrosomonas europaea ATCC 19718 1082538 NP_841626.1 CDS NE1587 NC_004757.1 1715875 1716246 R helix-hairpin-helix DNA-binding motif-containing protein complement(1715875..1716246) Nitrosomonas europaea ATCC 19718 1082539 NP_841627.1 CDS NE1588 NC_004757.1 1716263 1716565 R hypothetical protein complement(1716263..1716565) Nitrosomonas europaea ATCC 19718 1082540 NP_841628.1 CDS NE1589 NC_004757.1 1717946 1718353 R hypothetical protein complement(1717946..1718353) Nitrosomonas europaea ATCC 19718 1082541 NP_841629.1 CDS NE1590 NC_004757.1 1718350 1718652 R hypothetical protein complement(1718350..1718652) Nitrosomonas europaea ATCC 19718 1082542 NP_841630.1 CDS NE1591 NC_004757.1 1719177 1719473 R hypothetical protein complement(1719177..1719473) Nitrosomonas europaea ATCC 19718 1082543 NP_841631.1 CDS NE1592 NC_004757.1 1719470 1719712 R hypothetical protein complement(1719470..1719712) Nitrosomonas europaea ATCC 19718 1082544 NP_841632.1 CDS hag NC_004757.1 1720228 1721055 D flagellin 1720228..1721055 Nitrosomonas europaea ATCC 19718 1082545 NP_841633.1 CDS NE1594 NC_004757.1 1721226 1721582 D hypothetical protein 1721226..1721582 Nitrosomonas europaea ATCC 19718 1082546 NP_841634.1 CDS fliD NC_004757.1 1721745 1723190 D flagellar hook-associated protein 2 1721745..1723190 Nitrosomonas europaea ATCC 19718 1082547 NP_841635.1 CDS fliS NC_004757.1 1723237 1723707 D flagellar protein FliS 1723237..1723707 Nitrosomonas europaea ATCC 19718 1082548 NP_841636.1 CDS NE1597 NC_004757.1 1723704 1724075 D hypothetical protein 1723704..1724075 Nitrosomonas europaea ATCC 19718 1082549 NP_841637.1 CDS NE1598 NC_004757.1 1724620 1724877 D hypothetical protein 1724620..1724877 Nitrosomonas europaea ATCC 19718 1082550 NP_841638.1 CDS NE1599 NC_004757.1 1724881 1725156 D hypothetical protein 1724881..1725156 Nitrosomonas europaea ATCC 19718 1082551 NP_841639.1 CDS NE1600 NC_004757.1 1725475 1727184 R hypothetical protein complement(1725475..1727184) Nitrosomonas europaea ATCC 19718 1082552 NP_841640.1 CDS NE1601 NC_004757.1 1727358 1728002 R transmembrane protein complement(1727358..1728002) Nitrosomonas europaea ATCC 19718 1082553 NP_841641.1 CDS NE1602 NC_004757.1 1727996 1728433 R general secretion pathway protein G complement(1727996..1728433) Nitrosomonas europaea ATCC 19718 1082554 NP_841642.1 CDS NE1603 NC_004757.1 1728427 1728909 R similar to (NC_003296) GENERAL SECRETION PATHWAY GSPG RELATED TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] evalue=4.00e-46, 53% identity; general secretion pathway gspG related transmembrane protein complement(1728427..1728909) Nitrosomonas europaea ATCC 19718 1082555 NP_841643.1 CDS NE1604 NC_004757.1 1728939 1731230 R general (type II) secretion pathway (GSP) D protein complement(1728939..1731230) Nitrosomonas europaea ATCC 19718 1082556 NP_841644.1 CDS NE1605 NC_004757.1 1731343 1731912 R prolin-rich transmembrane protein complement(1731343..1731912) Nitrosomonas europaea ATCC 19718 1082557 NP_841645.1 CDS NE1606 NC_004757.1 1731993 1732547 R transmembrane protein complement(1731993..1732547) Nitrosomonas europaea ATCC 19718 1082558 NP_841646.1 CDS NE1607 NC_004757.1 1732529 1733080 R transmembrane protein complement(1732529..1733080) Nitrosomonas europaea ATCC 19718 1082559 NP_841647.1 CDS NE1608 NC_004757.1 1733058 1733903 R hypothetical protein complement(1733058..1733903) Nitrosomonas europaea ATCC 19718 1082560 NP_841648.1 CDS NE1609 NC_004757.1 1733884 1735575 R type II secretion system protein E complement(1733884..1735575) Nitrosomonas europaea ATCC 19718 1082561 NP_841649.1 CDS NE1610 NC_004757.1 1735575 1736759 R type II secretion system protein complement(1735575..1736759) Nitrosomonas europaea ATCC 19718 1082562 NP_841650.1 CDS NE1611 NC_004757.1 1736778 1737278 R general secretion pathway protein G complement(1736778..1737278) Nitrosomonas europaea ATCC 19718 1082563 NP_841651.1 CDS dapF NC_004757.1 1737613 1738440 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1737613..1738440 Nitrosomonas europaea ATCC 19718 1082564 NP_841652.1 CDS NE1613 NC_004757.1 1738567 1740297 D ABC transporter ATP-binding protein/permease 1738567..1740297 Nitrosomonas europaea ATCC 19718 1082565 NP_841653.1 CDS cca NC_004757.1 1740272 1741510 R catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase complement(1740272..1741510) Nitrosomonas europaea ATCC 19718 1082566 NP_841654.1 CDS slt NC_004757.1 1741519 1743426 R SLT domain-containing protein complement(1741519..1743426) Nitrosomonas europaea ATCC 19718 1082567 NP_841655.1 CDS gdhA NC_004757.1 1743624 1744967 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(1743624..1744967) Nitrosomonas europaea ATCC 19718 1082568 NP_841656.1 CDS NE1617 NC_004757.1 1745225 1745785 D ECF subfamily RNA polymerase sigma factor 1745225..1745785 Nitrosomonas europaea ATCC 19718 1082569 NP_841657.1 CDS NE1622 NC_004757.1 1749937 1750350 D hypothetical protein 1749937..1750350 Nitrosomonas europaea ATCC 19718 1082574 NP_841658.1 CDS metH NC_004757.1 1750574 1754287 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(1750574..1754287) Nitrosomonas europaea ATCC 19718 1082575 NP_841659.1 CDS gltX NC_004757.1 1754414 1755805 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(1754414..1755805) Nitrosomonas europaea ATCC 19718 1082576 NP_841660.1 CDS NE1625 NC_004757.1 1756638 1758497 D ribonuclease II domain-containing protein 1756638..1758497 Nitrosomonas europaea ATCC 19718 1082577 NP_841661.1 CDS NE1626 NC_004757.1 1758504 1759418 D TonB protein 1758504..1759418 Nitrosomonas europaea ATCC 19718 1082578 NP_841662.1 CDS aroE1 NC_004757.1 1759452 1760282 D shikimate / quinate 5-dehydrogenase 1759452..1760282 Nitrosomonas europaea ATCC 19718 1082579 NP_841663.1 CDS mtgA NC_004757.1 1760279 1761013 D glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 1760279..1761013 Nitrosomonas europaea ATCC 19718 1082580 NP_841664.1 CDS NE1629 NC_004757.1 1761187 1762383 D hypothetical protein 1761187..1762383 Nitrosomonas europaea ATCC 19718 1082581 NP_841665.1 CDS NE1630 NC_004757.1 1762568 1762975 D transposase 1762568..1762975 Nitrosomonas europaea ATCC 19718 1082582 NP_841666.1 CDS NE1631 NC_004757.1 1762975 1763343 D IS4 family transposase 1762975..1763343 Nitrosomonas europaea ATCC 19718 1082583 NP_841667.1 CDS mgtE NC_004757.1 1764111 1765541 D divalent cation transporter 1764111..1765541 Nitrosomonas europaea ATCC 19718 1082585 NP_841668.1 CDS NE1634 NC_004757.1 1765533 1766645 R hypothetical protein complement(1765533..1766645) Nitrosomonas europaea ATCC 19718 1082586 NP_841669.1 CDS NE1635 NC_004757.1 1766638 1767546 R hypothetical protein complement(1766638..1767546) Nitrosomonas europaea ATCC 19718 1082587 NP_841670.1 CDS NE1636 NC_004757.1 1767543 1767863 R hypothetical protein complement(1767543..1767863) Nitrosomonas europaea ATCC 19718 1082588 NP_841671.1 CDS NE1637 NC_004757.1 1767860 1768294 R hypothetical protein complement(1767860..1768294) Nitrosomonas europaea ATCC 19718 1082589 NP_841672.1 CDS czcA NC_004757.1 1768644 1771862 R acriflavin resistance protein:heavy metal efflux pump CzcA complement(1768644..1771862) Nitrosomonas europaea ATCC 19718 1082590 NP_841673.1 CDS czcB NC_004757.1 1771967 1773460 R hemolysin D complement(1771967..1773460) Nitrosomonas europaea ATCC 19718 1082591 NP_841674.1 CDS czcC NC_004757.1 1773457 1774863 R Outer membrane efflux protein complement(1773457..1774863) Nitrosomonas europaea ATCC 19718 1082592 NP_841675.1 CDS NE1641 NC_004757.1 1774969 1775340 R hypothetical protein complement(1774969..1775340) Nitrosomonas europaea ATCC 19718 1082593 NP_841676.1 CDS NE1642 NC_004757.1 1775496 1776092 R Maf-like protein complement(1775496..1776092) Nitrosomonas europaea ATCC 19718 1082594 NP_841677.1 CDS NE1643 NC_004757.1 1776161 1776667 D hypothetical protein 1776161..1776667 Nitrosomonas europaea ATCC 19718 1082595 NP_841678.1 CDS rpmF NC_004757.1 1776708 1776890 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1776708..1776890 Nitrosomonas europaea ATCC 19718 1082596 NP_841679.2 CDS plsX NC_004757.1 1776941 1777987 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1776941..1777987 Nitrosomonas europaea ATCC 19718 1082597 NP_841680.1 CDS fabH NC_004757.1 1777996 1778952 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1777996..1778952 Nitrosomonas europaea ATCC 19718 1082598 NP_841681.1 CDS fabD NC_004757.1 1778956 1779894 D malonyl CoA-ACP transacylase 1778956..1779894 Nitrosomonas europaea ATCC 19718 1082599 NP_841682.1 CDS fabG1 NC_004757.1 1779950 1780693 D short-chain dehydrogenase/reductase 1779950..1780693 Nitrosomonas europaea ATCC 19718 1082600 NP_841683.1 CDS acpP NC_004757.1 1780861 1781106 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1780861..1781106 Nitrosomonas europaea ATCC 19718 1082601 NP_841684.1 CDS fabF1 NC_004757.1 1781140 1782381 D Beta-ketoacyl synthase 1781140..1782381 Nitrosomonas europaea ATCC 19718 1082602 NP_841685.1 CDS NE1651 NC_004757.1 1782509 1783540 D hypothetical protein 1782509..1783540 Nitrosomonas europaea ATCC 19718 1082603 NP_841686.1 CDS NE1652 NC_004757.1 1783631 1786309 D dolichol monophosphate mannose synthase 1783631..1786309 Nitrosomonas europaea ATCC 19718 1082604 NP_841687.1 CDS NE1653 NC_004757.1 1786263 1787057 R ZIP Zinc transporter complement(1786263..1787057) Nitrosomonas europaea ATCC 19718 1082605 NP_841688.1 CDS NE1654 NC_004757.1 1787250 1788014 R hypothetical protein complement(1787250..1788014) Nitrosomonas europaea ATCC 19718 1082606 NP_841689.1 CDS NE1655 NC_004757.1 1788082 1789266 R class-I aminotransferase complement(1788082..1789266) Nitrosomonas europaea ATCC 19718 1082607 NP_841690.1 CDS NE1656 NC_004757.1 1789263 1789544 R hypothetical protein complement(1789263..1789544) Nitrosomonas europaea ATCC 19718 1082608 NP_841691.1 CDS NE1657 NC_004757.1 1789665 1790585 R hypothetical protein complement(1789665..1790585) Nitrosomonas europaea ATCC 19718 1082609 NP_841692.1 CDS NE1658 NC_004757.1 1790664 1792496 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(1790664..1792496) Nitrosomonas europaea ATCC 19718 1082610 NP_841693.1 CDS NE1659 NC_004757.1 1792885 1793865 D hypothetical protein 1792885..1793865 Nitrosomonas europaea ATCC 19718 1082611 NP_841694.1 CDS greA NC_004757.1 1793869 1794390 R transcription elongation factor GreA/GreB complement(1793869..1794390) Nitrosomonas europaea ATCC 19718 1082612 NP_841695.1 CDS carB NC_004757.1 1794525 1797722 R xarbamoyl-phosphate synthase complement(1794525..1797722) Nitrosomonas europaea ATCC 19718 1082613 NP_841696.1 CDS carA NC_004757.1 1797747 1798898 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(1797747..1798898) Nitrosomonas europaea ATCC 19718 1082614 NP_841697.1 CDS prlC NC_004757.1 1799198 1801303 R M3 family peptidase complement(1799198..1801303) Nitrosomonas europaea ATCC 19718 1082615 NP_841698.1 CDS pyrX NC_004757.1 1801423 1802694 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(1801423..1802694) Nitrosomonas europaea ATCC 19718 1082616 NP_841699.1 CDS pyrB NC_004757.1 1802696 1803646 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(1802696..1803646) Nitrosomonas europaea ATCC 19718 1082617 NP_841700.1 CDS pyrR NC_004757.1 1803782 1804285 R regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase complement(1803782..1804285) Nitrosomonas europaea ATCC 19718 1082618 NP_841701.1 CDS NE1667 NC_004757.1 1804272 1804718 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(1804272..1804718) Nitrosomonas europaea ATCC 19718 1082619 NP_841702.1 CDS NE1668 NC_004757.1 1804711 1805319 R hypothetical protein complement(1804711..1805319) Nitrosomonas europaea ATCC 19718 1082620 NP_841703.1 CDS NE1669 NC_004757.1 1805316 1805942 R hypothetical protein complement(1805316..1805942) Nitrosomonas europaea ATCC 19718 1082621 NP_841704.1 CDS NE1670 NC_004757.1 1806003 1807277 R glycolate oxidase iron-sulfur subunit complement(1806003..1807277) Nitrosomonas europaea ATCC 19718 1082622 NP_841705.1 CDS rpsP NC_004757.1 1807491 1807760 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1807491..1807760 Nitrosomonas europaea ATCC 19718 1082623 NP_841706.1 CDS rimM NC_004757.1 1807789 1808298 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1807789..1808298 Nitrosomonas europaea ATCC 19718 1082624 NP_841707.1 CDS trmD NC_004757.1 1808309 1809121 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1808309..1809121 Nitrosomonas europaea ATCC 19718 1082625 NP_841708.1 CDS rplS NC_004757.1 1809123 1809521 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1809123..1809521 Nitrosomonas europaea ATCC 19718 1082626 NP_841709.1 CDS NE1675 NC_004757.1 1809713 1810756 D integrase catalytic subunit 1809713..1810756 Nitrosomonas europaea ATCC 19718 1082627 NP_841710.1 CDS yfgD NC_004757.1 1811991 1812338 R arsenate reductase complement(1811991..1812338) Nitrosomonas europaea ATCC 19718 1082630 NP_841711.1 CDS NE1679 NC_004757.1 1812348 1812866 R hypothetical protein complement(1812348..1812866) Nitrosomonas europaea ATCC 19718 1082631 NP_841712.1 CDS NE1680 NC_004757.1 1812938 1813195 R hypothetical protein complement(1812938..1813195) Nitrosomonas europaea ATCC 19718 1082632 NP_841713.1 CDS NE1681 NC_004757.1 1813254 1813916 R methyltransferase complement(1813254..1813916) Nitrosomonas europaea ATCC 19718 1082633 NP_841714.1 CDS NE1682 NC_004757.1 1813947 1815140 R transmembrane protein complement(1813947..1815140) Nitrosomonas europaea ATCC 19718 1082634 NP_841715.1 CDS NE1683 NC_004757.1 1815289 1815600 R hypothetical protein complement(1815289..1815600) Nitrosomonas europaea ATCC 19718 1082635 NP_841716.1 CDS NE1684 NC_004757.1 1815606 1816070 R hypothetical protein complement(1815606..1816070) Nitrosomonas europaea ATCC 19718 1082636 NP_841717.1 CDS NE1685 NC_004757.1 1816098 1817501 R hypothetical protein complement(1816098..1817501) Nitrosomonas europaea ATCC 19718 1082637 NP_841718.1 CDS NE1686 NC_004757.1 1817578 1818336 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1817578..1818336 Nitrosomonas europaea ATCC 19718 1082638 NP_841719.1 CDS hpaI2 NC_004757.1 1818356 1819117 D similar to (NC_003296) PROBABLE 2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOICACID ALDOLASE PROTEIN [Ralstonia solanacearum] evalue=3.00e-40, 37% identity; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1818356..1819117 Nitrosomonas europaea ATCC 19718 1082639 NP_841720.1 CDS serA NC_004757.1 1819114 1820049 D D-isomer specific 2-hydroxyacid dehydrogenase 1819114..1820049 Nitrosomonas europaea ATCC 19718 1082640 NP_841721.1 CDS NE1689 NC_004757.1 1820042 1820986 D epimerase 1820042..1820986 Nitrosomonas europaea ATCC 19718 1082641 NP_841722.1 CDS NE1690 NC_004757.1 1820983 1821639 D HAD family hydrolase 1820983..1821639 Nitrosomonas europaea ATCC 19718 1082642 NP_841723.1 CDS NE1691 NC_004757.1 1821621 1822307 D glucosamine/galactosamine-6-phosphate isomerase 1821621..1822307 Nitrosomonas europaea ATCC 19718 1082643 NP_841724.1 CDS NE1692 NC_004757.1 1822332 1822694 D hypothetical protein 1822332..1822694 Nitrosomonas europaea ATCC 19718 1082644 NP_841725.1 CDS NE1693 NC_004757.1 1822742 1823395 R transmembrane protein complement(1822742..1823395) Nitrosomonas europaea ATCC 19718 1082645 NP_841726.1 CDS NE1694 NC_004757.1 1823456 1824463 R glucokinase complement(1823456..1824463) Nitrosomonas europaea ATCC 19718 1082646 NP_841727.1 CDS NE1695 NC_004757.1 1824728 1825654 D hexapeptide repeat-containing transferase 1824728..1825654 Nitrosomonas europaea ATCC 19718 1082647 NP_841728.1 CDS NE1696 NC_004757.1 1825735 1826922 D hypothetical protein 1825735..1826922 Nitrosomonas europaea ATCC 19718 1082648 NP_841729.1 CDS metY NC_004757.1 1826919 1828187 R Cys/Met metabolism pyridoxal-phosphate-dependent enzyme complement(1826919..1828187) Nitrosomonas europaea ATCC 19718 1082649 NP_841730.1 CDS NE1698 NC_004757.1 1828413 1829384 R hypothetical protein complement(1828413..1829384) Nitrosomonas europaea ATCC 19718 1082650 NP_841731.1 CDS NE1699 NC_004757.1 1829479 1830753 D hypothetical protein 1829479..1830753 Nitrosomonas europaea ATCC 19718 1082651 NP_841732.1 CDS NE1700 NC_004757.1 1830928 1834314 R diguanylate cyclase/phosphodiesterase complement(1830928..1834314) Nitrosomonas europaea ATCC 19718 1082652 NP_841733.1 CDS NE1701 NC_004757.1 1834591 1835928 D msrA, pms; peptide methionine sulfoxide reductase 1834591..1835928 Nitrosomonas europaea ATCC 19718 1082653 NP_841734.1 CDS NE1702 NC_004757.1 1836014 1837441 R hypothetical protein complement(1836014..1837441) Nitrosomonas europaea ATCC 19718 1082654 NP_841735.1 CDS NE1703 NC_004757.1 1838132 1838443 R hypothetical protein complement(1838132..1838443) Nitrosomonas europaea ATCC 19718 1082655 NP_841736.1 CDS ccrB NC_004757.1 1838454 1838837 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(1838454..1838837) Nitrosomonas europaea ATCC 19718 1082656 NP_841737.1 CDS mutS NC_004757.1 1839274 1841895 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1839274..1841895 Nitrosomonas europaea ATCC 19718 1082657 NP_841738.1 CDS slyD NC_004757.1 1841899 1842378 R FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) complement(1841899..1842378) Nitrosomonas europaea ATCC 19718 1082658 NP_841739.1 CDS rnhB NC_004757.1 1842393 1843046 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(1842393..1843046) Nitrosomonas europaea ATCC 19718 1082659 NP_841740.1 CDS fabZ NC_004757.1 1843068 1843529 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(1843068..1843529) Nitrosomonas europaea ATCC 19718 1082660 NP_841741.1 CDS NE1709 NC_004757.1 1843546 1844109 R transmembrane protein complement(1843546..1844109) Nitrosomonas europaea ATCC 19718 1082661 NP_841742.1 CDS NE1710 NC_004757.1 1844136 1846412 R surface antigen (D15) complement(1844136..1846412) Nitrosomonas europaea ATCC 19718 1082662 NP_841743.1 CDS NE1711 NC_004757.1 1846415 1847782 R membrane-associated Zn-dependent protease 1 complement(1846415..1847782) Nitrosomonas europaea ATCC 19718 1082663 NP_841744.1 CDS dxr NC_004757.1 1847809 1849050 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(1847809..1849050) Nitrosomonas europaea ATCC 19718 1082664 NP_841745.1 CDS cdsA NC_004757.1 1849047 1849874 R cdsA; phosphatidate cytidylyltransferase complement(1849047..1849874) Nitrosomonas europaea ATCC 19718 1082665 NP_841746.1 CDS NE1714 NC_004757.1 1849913 1850704 R UDP pyrophosphate synthetase complement(1849913..1850704) Nitrosomonas europaea ATCC 19718 1082666 NP_841747.1 CDS frr NC_004757.1 1850708 1851265 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(1850708..1851265) Nitrosomonas europaea ATCC 19718 1082667 NP_841748.1 CDS pyrH NC_004757.1 1851371 1852084 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(1851371..1852084) Nitrosomonas europaea ATCC 19718 1082668 NP_841749.1 CDS tsf NC_004757.1 1852239 1853123 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1852239..1853123) Nitrosomonas europaea ATCC 19718 1082669 NP_841750.1 CDS rpsB NC_004757.1 1853198 1853953 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1853198..1853953) Nitrosomonas europaea ATCC 19718 1082670 NP_841751.1 CDS NE1719 NC_004757.1 1854179 1854922 R anaerobic transcriptional regulatory protein complement(1854179..1854922) Nitrosomonas europaea ATCC 19718 1082671 NP_841752.1 CDS NE1720 NC_004757.1 1854990 1855469 R cytochrome c, class I complement(1854990..1855469) Nitrosomonas europaea ATCC 19718 1082672 NP_841753.1 CDS NE1721 NC_004757.1 1855500 1857650 R hypothetical protein complement(1855500..1857650) Nitrosomonas europaea ATCC 19718 1082673 NP_841754.1 CDS NE1722 NC_004757.1 1857895 1858320 R ferric uptake regulator family protein complement(1857895..1858320) Nitrosomonas europaea ATCC 19718 1082674 NP_841755.1 CDS NE1723 NC_004757.1 1858966 1860204 R hypothetical protein complement(1858966..1860204) Nitrosomonas europaea ATCC 19718 1082675 NP_841756.1 CDS NE1724 NC_004757.1 1860292 1861242 D phosphotransferase domain-containing protein 1860292..1861242 Nitrosomonas europaea ATCC 19718 1082676 NP_841757.1 CDS NE1725 NC_004757.1 1861300 1861932 D Sua5/YciO/YrdC/YwlC family protein 1861300..1861932 Nitrosomonas europaea ATCC 19718 1082677 NP_841758.1 CDS NE1726 NC_004757.1 1861925 1862590 D integral membrane transmembrane protein 1861925..1862590 Nitrosomonas europaea ATCC 19718 1082678 NP_841759.1 CDS trpS NC_004757.1 1862663 1863865 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1862663..1863865 Nitrosomonas europaea ATCC 19718 1082679 NP_841760.1 CDS NE1728 NC_004757.1 1863905 1864705 D hypothetical protein 1863905..1864705 Nitrosomonas europaea ATCC 19718 1082680 NP_841761.1 CDS NE1729 NC_004757.1 1864671 1865333 D hypothetical protein 1864671..1865333 Nitrosomonas europaea ATCC 19718 1082681 NP_841762.1 CDS icd NC_004757.1 1865346 1866593 D isocitrate dehydrogenase [NADP] oxidoreductase protein 1865346..1866593 Nitrosomonas europaea ATCC 19718 1082682 NP_841763.1 CDS cspD2 NC_004757.1 1866714 1866917 R cold-shock DNA-binding protein complement(1866714..1866917) Nitrosomonas europaea ATCC 19718 1082683 NP_841764.1 CDS clpS NC_004757.1 1867290 1867601 D involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1867290..1867601 Nitrosomonas europaea ATCC 19718 1082684 NP_841765.1 CDS clpA NC_004757.1 1867603 1869873 D ClpA, ATP dependent protease, chaperonin 1867603..1869873 Nitrosomonas europaea ATCC 19718 1082685 NP_841766.1 CDS pyrE NC_004757.1 1869892 1870575 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1869892..1870575 Nitrosomonas europaea ATCC 19718 1082686 NP_841767.1 CDS NE1735 NC_004757.1 1870871 1871947 D sulfonate binding protein 1870871..1871947 Nitrosomonas europaea ATCC 19718 1082687 NP_841768.1 CDS NE1736 NC_004757.1 1871952 1872788 D transport system permease 1871952..1872788 Nitrosomonas europaea ATCC 19718 1082688 NP_841769.1 CDS nrtD NC_004757.1 1872776 1873609 D nitrate/nitrite transport system ATP-binding protein NrtD 1872776..1873609 Nitrosomonas europaea ATCC 19718 1082689 NP_841770.1 CDS NE1738 NC_004757.1 1873895 1875391 D sensory transduction histidine kinase 1873895..1875391 Nitrosomonas europaea ATCC 19718 1082690 NP_841771.1 CDS NE1740 NC_004757.1 1875853 1876731 R IS4 family transposase complement(1875853..1876731) Nitrosomonas europaea ATCC 19718 1082692 NP_841772.1 CDS mutL NC_004757.1 1877222 1879036 R mutL; DNA mismatch repair protein complement(1877222..1879036) Nitrosomonas europaea ATCC 19718 1082694 NP_841773.1 CDS cbbI NC_004757.1 1879254 1879913 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1879254..1879913 Nitrosomonas europaea ATCC 19718 1082695 NP_841774.1 CDS phoU NC_004757.1 1880058 1880765 D hypothetical protein 1880058..1880765 Nitrosomonas europaea ATCC 19718 1082696 NP_841775.1 CDS ppx NC_004757.1 1880790 1882325 D Ppx/GppA phosphatase 1880790..1882325 Nitrosomonas europaea ATCC 19718 1082697 NP_841776.1 CDS NE1746 NC_004757.1 1882401 1882820 R fimbrial protein pilin complement(1882401..1882820) Nitrosomonas europaea ATCC 19718 1082698 NP_841777.1 CDS pilY1 NC_004757.1 1882838 1886269 R type 4 fimbrial biogenesis protein PilY1 complement(1882838..1886269) Nitrosomonas europaea ATCC 19718 1082699 NP_841778.1 CDS NE1748 NC_004757.1 1886283 1887317 R hypothetical protein complement(1886283..1887317) Nitrosomonas europaea ATCC 19718 1082700 NP_841779.1 CDS NE1749 NC_004757.1 1887342 1888370 R hypothetical protein complement(1887342..1888370) Nitrosomonas europaea ATCC 19718 1082701 NP_841780.1 CDS NE1750 NC_004757.1 1888385 1888852 R pre-pilin leader sequence complement(1888385..1888852) Nitrosomonas europaea ATCC 19718 1082702 NP_841781.1 CDS NE1751 NC_004757.1 1888846 1889379 R type-4 fimbrial pilin related signal peptide protein complement(1888846..1889379) Nitrosomonas europaea ATCC 19718 1082703 NP_841782.1 CDS NE1752 NC_004757.1 1889679 1890329 R hypothetical protein complement(1889679..1890329) Nitrosomonas europaea ATCC 19718 1082704 NP_841783.1 CDS lig NC_004757.1 1890487 1892532 D NAD-dependent DNA ligase 1890487..1892532 Nitrosomonas europaea ATCC 19718 1082705 NP_841784.1 CDS NE1754 NC_004757.1 1892686 1893432 D Catalyzes the phosphorolytic cleavage of 6-oxopurine nucleosides; 5'-methylthioadenosine phosphorylase 1892686..1893432 Nitrosomonas europaea ATCC 19718 1082706 NP_841785.1 CDS def NC_004757.1 1893425 1893955 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1893425..1893955 Nitrosomonas europaea ATCC 19718 1082707 NP_841786.1 CDS NE1756 NC_004757.1 1893978 1894391 R hypothetical protein complement(1893978..1894391) Nitrosomonas europaea ATCC 19718 1082708 NP_841787.1 CDS NE1757 NC_004757.1 1894644 1898096 D hypothetical protein 1894644..1898096 Nitrosomonas europaea ATCC 19718 1082709 NP_841788.1 CDS dedA NC_004757.1 1898374 1899024 D DedA family protein 1898374..1899024 Nitrosomonas europaea ATCC 19718 1082711 NP_841789.1 CDS NE1759 NC_004757.1 1899061 1901706 R hypothetical protein complement(1899061..1901706) Nitrosomonas europaea ATCC 19718 1082712 NP_841790.1 CDS NE1760 NC_004757.1 1902116 1903159 D integrase catalytic subunit 1902116..1903159 Nitrosomonas europaea ATCC 19718 1082713 NP_841791.1 CDS NE1761 NC_004757.1 1903260 1904309 R hypothetical protein complement(1903260..1904309) Nitrosomonas europaea ATCC 19718 1082714 NP_841792.1 CDS hptG NC_004757.1 1904523 1906445 R molecular chaperone; heat shock protein 90 complement(1904523..1906445) Nitrosomonas europaea ATCC 19718 1082715 NP_841793.1 CDS NE1763 NC_004757.1 1906555 1907655 D membrane-bound dehydrogenase oxidoreductase protein 1906555..1907655 Nitrosomonas europaea ATCC 19718 1082716 NP_841794.1 CDS nuoN NC_004757.1 1907694 1909139 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(1907694..1909139) Nitrosomonas europaea ATCC 19718 1082717 NP_841795.1 CDS nuoM NC_004757.1 1909206 1910687 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M complement(1909206..1910687) Nitrosomonas europaea ATCC 19718 1082718 NP_841796.1 CDS nuoL NC_004757.1 1910773 1912719 R nuoL; transmembrane NADH dehydrogenase I (chain L) oxidoreductase protein complement(1910773..1912719) Nitrosomonas europaea ATCC 19718 1082719 NP_841797.1 CDS nuoK NC_004757.1 1912784 1913089 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K complement(1912784..1913089) Nitrosomonas europaea ATCC 19718 1082720 NP_841798.1 CDS nuoJ NC_004757.1 1913145 1913750 R NADH-ubiquinone/plastoquinone oxidoreductase chain 6 complement(1913145..1913750) Nitrosomonas europaea ATCC 19718 1082721 NP_841799.1 CDS nuoI NC_004757.1 1913768 1914256 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(1913768..1914256) Nitrosomonas europaea ATCC 19718 1082722 NP_841800.1 CDS nuoH NC_004757.1 1914270 1915370 R respiratory-chain NADH dehydrogenase subunit 1 complement(1914270..1915370) Nitrosomonas europaea ATCC 19718 1082723 NP_841801.1 CDS nuoG NC_004757.1 1915393 1917798 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G complement(1915393..1917798) Nitrosomonas europaea ATCC 19718 1082724 NP_841802.1 CDS nuoF NC_004757.1 1917861 1919138 R respiratory-chain NADH dehydrogenase 51 Kd subunit complement(1917861..1919138) Nitrosomonas europaea ATCC 19718 1082725 NP_841803.1 CDS nuoE NC_004757.1 1919135 1919623 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E complement(1919135..1919623) Nitrosomonas europaea ATCC 19718 1082726 NP_841804.1 CDS nuoD NC_004757.1 1919620 1920873 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D complement(1919620..1920873) Nitrosomonas europaea ATCC 19718 1082727 NP_841805.1 CDS nuoC NC_004757.1 1920934 1921554 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C complement(1920934..1921554) Nitrosomonas europaea ATCC 19718 1082728 NP_841806.1 CDS nuoB NC_004757.1 1921567 1922043 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(1921567..1922043) Nitrosomonas europaea ATCC 19718 1082729 NP_841807.1 CDS nuoA NC_004757.1 1922047 1922415 R NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 complement(1922047..1922415) Nitrosomonas europaea ATCC 19718 1082730 NP_841808.1 CDS secG NC_004757.1 1922605 1922979 R preprotein translocase subunit SecG complement(1922605..1922979) Nitrosomonas europaea ATCC 19718 1082732 NP_841809.1 CDS tpiA NC_004757.1 1922996 1923754 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(1922996..1923754) Nitrosomonas europaea ATCC 19718 1082733 NP_841810.1 CDS gpmA NC_004757.1 1923957 1924706 D 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 1923957..1924706 Nitrosomonas europaea ATCC 19718 1082734 NP_841811.1 CDS NE1781 NC_004757.1 1924706 1925977 D M23/M37 familypeptidase 1924706..1925977 Nitrosomonas europaea ATCC 19718 1082735 NP_841812.1 CDS NE1782 NC_004757.1 1926074 1927504 D carboxy-terminal processing protease 1926074..1927504 Nitrosomonas europaea ATCC 19718 1082736 NP_841813.1 CDS thiF NC_004757.1 1927535 1928311 D NAD binding site:UBA/THIF-type NAD/FAD binding fold 1927535..1928311 Nitrosomonas europaea ATCC 19718 1082737 NP_841814.1 CDS NE1784 NC_004757.1 1928318 1930066 R ABC transporter ATP-binding protein/permease complement(1928318..1930066) Nitrosomonas europaea ATCC 19718 1082738 NP_841815.1 CDS pt NC_004757.1 1930189 1930689 D phosphotyrosine protein phosphatase 1930189..1930689 Nitrosomonas europaea ATCC 19718 1082739 NP_841816.1 CDS NE1788 NC_004757.1 1931964 1932332 D transposase 1931964..1932332 Nitrosomonas europaea ATCC 19718 1082742 NP_841817.1 CDS NE1789 NC_004757.1 1932137 1932712 D IS4 family transposase 1932137..1932712 Nitrosomonas europaea ATCC 19718 1082743 NP_841818.1 CDS NE1790 NC_004757.1 1932867 1933988 D hypothetical protein 1932867..1933988 Nitrosomonas europaea ATCC 19718 1082744 NP_841819.1 CDS NE1791 NC_004757.1 1933996 1934943 R hypothetical protein complement(1933996..1934943) Nitrosomonas europaea ATCC 19718 1082745 NP_841820.1 CDS NE1792 NC_004757.1 1935100 1936173 R hypothetical protein complement(1935100..1936173) Nitrosomonas europaea ATCC 19718 1082746 NP_841821.1 CDS NE1793 NC_004757.1 1936240 1937178 R hypothetical protein complement(1936240..1937178) Nitrosomonas europaea ATCC 19718 1082747 NP_841822.1 CDS NE1794 NC_004757.1 1937178 1938170 R hypothetical protein complement(1937178..1938170) Nitrosomonas europaea ATCC 19718 1082748 NP_841823.1 CDS NE1795 NC_004757.1 1938219 1940153 R glutamine amidotransferase class-II:asparagine synthase complement(1938219..1940153) Nitrosomonas europaea ATCC 19718 1082749 NP_841824.1 CDS NE1796 NC_004757.1 1940166 1941329 R group 1 glycosyl transferase complement(1940166..1941329) Nitrosomonas europaea ATCC 19718 1082750 NP_841825.1 CDS NE1797 NC_004757.1 1941346 1942926 R hypothetical protein complement(1941346..1942926) Nitrosomonas europaea ATCC 19718 1082751 NP_841826.1 CDS NE1798 NC_004757.1 1943007 1944203 R group 1 glycosyl transferase complement(1943007..1944203) Nitrosomonas europaea ATCC 19718 1082752 NP_841827.1 CDS NE1799 NC_004757.1 1944210 1945178 R hypothetical protein complement(1944210..1945178) Nitrosomonas europaea ATCC 19718 1082753 NP_841828.1 CDS NE1800 NC_004757.1 1945286 1946134 R polysaccharide deacetylase complement(1945286..1946134) Nitrosomonas europaea ATCC 19718 1082754 NP_841829.1 CDS NE1801 NC_004757.1 1946131 1946964 R ATP/GTP-binding motif-containing protein complement(1946131..1946964) Nitrosomonas europaea ATCC 19718 1082755 NP_841830.1 CDS NE1802 NC_004757.1 1946979 1948553 R hypothetical protein complement(1946979..1948553) Nitrosomonas europaea ATCC 19718 1082756 NP_841831.1 CDS yveL NC_004757.1 1948553 1949488 R capsular polysaccharide biosynthesis protein complement(1948553..1949488) Nitrosomonas europaea ATCC 19718 1082757 NP_841832.1 CDS NE1804 NC_004757.1 1949529 1951079 R chain length determinant protein complement(1949529..1951079) Nitrosomonas europaea ATCC 19718 1082758 NP_841833.1 CDS wza NC_004757.1 1951122 1951739 R polysaccharide export protein, outer membrane complement(1951122..1951739) Nitrosomonas europaea ATCC 19718 1082759 NP_841834.1 CDS NE1806 NC_004757.1 1952567 1954234 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 1952567..1954234 Nitrosomonas europaea ATCC 19718 1082760 NP_841835.1 CDS NE1807 NC_004757.1 1954496 1955869 D ATP-dependent RNA helicase protein 1954496..1955869 Nitrosomonas europaea ATCC 19718 1082761 NP_841836.1 CDS radA NC_004757.1 1956023 1957372 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(1956023..1957372) Nitrosomonas europaea ATCC 19718 1082762 NP_841837.1 CDS NE1809 NC_004757.1 1958086 1959036 D beta subunit of citrate lyase 1958086..1959036 Nitrosomonas europaea ATCC 19718 1082764 NP_841838.1 CDS sucC NC_004757.1 1959228 1960400 D catalyzes the formation of malyl-CoA from malate and CoA; malate--CoA ligase subunit beta 1959228..1960400 Nitrosomonas europaea ATCC 19718 1082765 NP_841839.1 CDS NE1811 NC_004757.1 1960431 1961318 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1960431..1961318 Nitrosomonas europaea ATCC 19718 1082766 NP_841840.1 CDS NE1814 NC_004757.1 1963996 1964574 R hypothetical protein complement(1963996..1964574) Nitrosomonas europaea ATCC 19718 1082769 NP_841841.1 CDS NE1815 NC_004757.1 1965060 1965383 D transposase IS911 1965060..1965383 Nitrosomonas europaea ATCC 19718 1082770 NP_841842.1 CDS NE1816 NC_004757.1 1965437 1966288 D integrase catalytic subunit 1965437..1966288 Nitrosomonas europaea ATCC 19718 1082771 NP_841843.1 CDS NE1817 NC_004757.1 1966830 1967459 D hypothetical protein 1966830..1967459 Nitrosomonas europaea ATCC 19718 1082772 NP_841844.1 CDS NE1818 NC_004757.1 1967419 1967694 D hypothetical protein 1967419..1967694 Nitrosomonas europaea ATCC 19718 1082773 NP_841845.1 CDS NE1821 NC_004757.1 1968379 1969221 D hypothetical protein 1968379..1969221 Nitrosomonas europaea ATCC 19718 1082776 NP_841846.1 CDS NE1822 NC_004757.1 1969221 1970063 D hypothetical protein 1969221..1970063 Nitrosomonas europaea ATCC 19718 1082777 NP_841847.1 CDS NE1823 NC_004757.1 1970502 1971593 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(1970502..1971593) Nitrosomonas europaea ATCC 19718 1082778 NP_841848.1 CDS pth NC_004757.1 1971668 1972255 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(1971668..1972255) Nitrosomonas europaea ATCC 19718 1082779 NP_841849.1 CDS rplY NC_004757.1 1972375 1972971 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(1972375..1972971) Nitrosomonas europaea ATCC 19718 1082780 NP_841850.1 CDS NE1826 NC_004757.1 1973028 1973978 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(1973028..1973978) Nitrosomonas europaea ATCC 19718 1082781 NP_841851.1 CDS ipk NC_004757.1 1974155 1974991 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(1974155..1974991) Nitrosomonas europaea ATCC 19718 1082783 NP_841852.1 CDS NE1828 NC_004757.1 1975012 1975650 R lipoprotein localization protein LolB complement(1975012..1975650) Nitrosomonas europaea ATCC 19718 1082784 NP_841853.1 CDS minE NC_004757.1 1975763 1976059 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(1975763..1976059) Nitrosomonas europaea ATCC 19718 1082785 NP_841854.1 CDS minD NC_004757.1 1976059 1976868 R ParA family ATPase complement(1976059..1976868) Nitrosomonas europaea ATCC 19718 1082786 NP_841855.1 CDS minC NC_004757.1 1976894 1977619 R cell division inhibitor MinC complement(1976894..1977619) Nitrosomonas europaea ATCC 19718 1082787 NP_841856.1 CDS NE1832 NC_004757.1 1977870 1978418 D hypothetical protein 1977870..1978418 Nitrosomonas europaea ATCC 19718 1082788 NP_841857.1 CDS NE1833 NC_004757.1 1978534 1979808 D hypothetical protein 1978534..1979808 Nitrosomonas europaea ATCC 19718 1082789 NP_841858.1 CDS trkA NC_004757.1 1980082 1981527 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 1980082..1981527 Nitrosomonas europaea ATCC 19718 1082790 NP_841859.1 CDS NE1835 NC_004757.1 1981537 1983006 D cation transport protein 1981537..1983006 Nitrosomonas europaea ATCC 19718 1082791 NP_841860.1 CDS pilG NC_004757.1 1983125 1983532 D response regulator receiver domain-containing protein 1983125..1983532 Nitrosomonas europaea ATCC 19718 1082792 NP_841861.1 CDS NE1837 NC_004757.1 1983629 1984165 D chorismate--pyruvate lyase 1983629..1984165 Nitrosomonas europaea ATCC 19718 1082793 NP_841862.1 CDS ubiA NC_004757.1 1984239 1985132 D catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 1984239..1985132 Nitrosomonas europaea ATCC 19718 1082794 NP_841863.1 CDS NE1839 NC_004757.1 1985203 1986666 D hypothetical protein 1985203..1986666 Nitrosomonas europaea ATCC 19718 1082795 NP_841864.1 CDS NE1840 NC_004757.1 1986878 1987921 D integrase catalytic subunit 1986878..1987921 Nitrosomonas europaea ATCC 19718 1082796 NP_841865.1 CDS NE1841 NC_004757.1 1987984 1988508 R hypothetical protein complement(1987984..1988508) Nitrosomonas europaea ATCC 19718 1082797 NP_841866.1 CDS NE1843 NC_004757.1 1990579 1991589 D integrase catalytic subunit 1990579..1991589 Nitrosomonas europaea ATCC 19718 1082800 NP_841867.1 CDS NE1845 NC_004757.1 1992108 1993151 D integrase catalytic subunit 1992108..1993151 Nitrosomonas europaea ATCC 19718 1082802 NP_841868.1 CDS NE1846 NC_004757.1 1993750 1994601 D HD domain-containing protein 1993750..1994601 Nitrosomonas europaea ATCC 19718 1082803 NP_841869.1 CDS NE1847 NC_004757.1 1994564 1996282 D guanylate cyclase 1994564..1996282 Nitrosomonas europaea ATCC 19718 1082804 NP_841870.1 CDS greB NC_004757.1 1996345 1996893 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(1996345..1996893) Nitrosomonas europaea ATCC 19718 1082805 NP_841871.1 CDS NE1849 NC_004757.1 1996977 1997843 D hypothetical protein 1996977..1997843 Nitrosomonas europaea ATCC 19718 1082806 NP_841872.1 CDS recG NC_004757.1 1997828 1999885 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(1997828..1999885) Nitrosomonas europaea ATCC 19718 1082807 NP_841873.1 CDS NE1851 NC_004757.1 1999916 2000305 R hypothetical protein complement(1999916..2000305) Nitrosomonas europaea ATCC 19718 1082808 NP_841874.1 CDS murA NC_004757.1 2000393 2001646 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2000393..2001646 Nitrosomonas europaea ATCC 19718 1082809 NP_841875.1 CDS NE1853 NC_004757.1 2001694 2002356 R hypothetical protein complement(2001694..2002356) Nitrosomonas europaea ATCC 19718 1082810 NP_841876.1 CDS argH NC_004757.1 2002541 2003926 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2002541..2003926 Nitrosomonas europaea ATCC 19718 1082811 NP_841877.1 CDS NE1855 NC_004757.1 2003946 2004851 D hypothetical protein 2003946..2004851 Nitrosomonas europaea ATCC 19718 1082812 NP_841878.1 CDS NE1856 NC_004757.1 2005137 2006612 D hypothetical protein 2005137..2006612 Nitrosomonas europaea ATCC 19718 1082813 NP_841879.1 CDS ygcA NC_004757.1 2006677 2007858 D SAM-binding motif-containing protein 2006677..2007858 Nitrosomonas europaea ATCC 19718 1082814 NP_841880.1 CDS NE1858 NC_004757.1 2007987 2008811 D hypothetical protein 2007987..2008811 Nitrosomonas europaea ATCC 19718 1082815 NP_841881.1 CDS cheB NC_004757.1 2009107 2010183 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(2009107..2010183) Nitrosomonas europaea ATCC 19718 1082816 NP_841882.1 CDS NE1860 NC_004757.1 2010194 2010799 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(2010194..2010799) Nitrosomonas europaea ATCC 19718 1082817 NP_841883.1 CDS cheR NC_004757.1 2010875 2011723 R chemotaxis protein CheR complement(2010875..2011723) Nitrosomonas europaea ATCC 19718 1082818 NP_841884.1 CDS NE1862 NC_004757.1 2011720 2012088 R hypothetical protein complement(2011720..2012088) Nitrosomonas europaea ATCC 19718 1082819 NP_841885.1 CDS NE1863 NC_004757.1 2012073 2014403 R chemotaxis transducer complement(2012073..2014403) Nitrosomonas europaea ATCC 19718 1082820 NP_841886.1 CDS NE1864 NC_004757.1 2014626 2016884 R chemotaxis sensory transducer protein complement(2014626..2016884) Nitrosomonas europaea ATCC 19718 1082821 NP_841887.1 CDS cheW NC_004757.1 2016958 2017467 R chemotaxis protein CheW complement(2016958..2017467) Nitrosomonas europaea ATCC 19718 1082822 NP_841888.1 CDS cheA NC_004757.1 2017542 2019755 R similar to (NC_003296) PROBABLE CHEMOTAXIS SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] evalue=0.00e+00, 51% identity; chemotaxis sensor histidine kinase transcription regulator protein complement(2017542..2019755) Nitrosomonas europaea ATCC 19718 1082823 NP_841889.1 CDS NE1867 NC_004757.1 2020068 2020502 D hypothetical protein 2020068..2020502 Nitrosomonas europaea ATCC 19718 1082824 NP_841890.1 CDS NE1868 NC_004757.1 2020591 2021223 D hypothetical protein 2020591..2021223 Nitrosomonas europaea ATCC 19718 1082825 NP_841891.1 CDS ubiB NC_004757.1 2021313 2022827 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 2021313..2022827 Nitrosomonas europaea ATCC 19718 1082826 NP_841892.1 CDS potA NC_004757.1 2022943 2024028 D potA; spermidine/putrescine transport system ATP-binding protein 2022943..2024028 Nitrosomonas europaea ATCC 19718 1082827 NP_841893.1 CDS potB NC_004757.1 2024031 2024939 D potB; spermidine/putrescine transport system permease 2024031..2024939 Nitrosomonas europaea ATCC 19718 1082828 NP_841894.1 CDS potC NC_004757.1 2024949 2025725 D potC; spermidine/putrescine transport system permease 2024949..2025725 Nitrosomonas europaea ATCC 19718 1082829 NP_841895.1 CDS potD NC_004757.1 2025728 2026837 D solute-binding family 1 protein 2025728..2026837 Nitrosomonas europaea ATCC 19718 1082830 NP_841896.1 CDS NE1874 NC_004757.1 2026843 2027151 D ferredoxin 2fe-2s protein 2026843..2027151 Nitrosomonas europaea ATCC 19718 1082831 NP_841897.1 CDS NE1875 NC_004757.1 2027464 2028117 D esterase/lipase/thioesterase family protein 2027464..2028117 Nitrosomonas europaea ATCC 19718 1082832 NP_841898.1 CDS hemF NC_004757.1 2028086 2028991 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(2028086..2028991) Nitrosomonas europaea ATCC 19718 1082833 NP_841899.1 CDS aroC NC_004757.1 2029161 2030333 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2029161..2030333 Nitrosomonas europaea ATCC 19718 1082834 NP_841900.1 CDS NE1878 NC_004757.1 2030393 2030989 R hypothetical protein complement(2030393..2030989) Nitrosomonas europaea ATCC 19718 1082835 NP_841901.1 CDS NE1879 NC_004757.1 2031097 2031915 D hypothetical protein 2031097..2031915 Nitrosomonas europaea ATCC 19718 1082836 NP_841902.1 CDS NE1880 NC_004757.1 2032033 2033076 R integrase catalytic subunit complement(2032033..2033076) Nitrosomonas europaea ATCC 19718 1082837 NP_841903.1 CDS NE1881 NC_004757.1 2033321 2033968 R hypothetical protein complement(2033321..2033968) Nitrosomonas europaea ATCC 19718 1082838 NP_841904.1 CDS NE1882 NC_004757.1 2034157 2035446 D hypothetical protein 2034157..2035446 Nitrosomonas europaea ATCC 19718 1082839 NP_841905.1 CDS NE1883 NC_004757.1 2035443 2035985 D hypothetical protein 2035443..2035985 Nitrosomonas europaea ATCC 19718 1082840 NP_841906.1 CDS NE1884 NC_004757.1 2035978 2036676 D DNA ligase III 2035978..2036676 Nitrosomonas europaea ATCC 19718 1082841 NP_841907.1 CDS NE1885 NC_004757.1 2036733 2037107 D hypothetical protein 2036733..2037107 Nitrosomonas europaea ATCC 19718 1082842 NP_841908.1 CDS katA NC_004757.1 2037432 2038889 R catalase complement(2037432..2038889) Nitrosomonas europaea ATCC 19718 1082843 NP_841909.1 CDS NE1887 NC_004757.1 2038953 2040287 R hypothetical protein complement(2038953..2040287) Nitrosomonas europaea ATCC 19718 1082844 NP_841910.1 CDS NE1888 NC_004757.1 2040325 2041125 R hypothetical protein complement(2040325..2041125) Nitrosomonas europaea ATCC 19718 1082845 NP_841911.1 CDS NE1889 NC_004757.1 2041205 2041666 R hypothetical protein complement(2041205..2041666) Nitrosomonas europaea ATCC 19718 1082846 NP_841912.1 CDS NE1890 NC_004757.1 2041956 2042270 R hypothetical protein complement(2041956..2042270) Nitrosomonas europaea ATCC 19718 1082847 NP_841913.1 CDS NE1891 NC_004757.1 2042272 2042466 R hypothetical protein complement(2042272..2042466) Nitrosomonas europaea ATCC 19718 1082848 NP_841914.1 CDS nadB1 NC_004757.1 2042579 2044162 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(2042579..2044162) Nitrosomonas europaea ATCC 19718 1082849 NP_841915.1 CDS ilvE NC_004757.1 2044381 2045304 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2044381..2045304 Nitrosomonas europaea ATCC 19718 1082850 NP_841916.1 CDS NE1894 NC_004757.1 2045331 2045555 D hypothetical protein 2045331..2045555 Nitrosomonas europaea ATCC 19718 1082851 NP_841917.1 CDS NE1895 NC_004757.1 2045620 2046996 D phosphoglucomutase and phosphomannomutase family protein 2045620..2046996 Nitrosomonas europaea ATCC 19718 1082852 NP_841918.1 CDS nadE NC_004757.1 2047045 2048652 D carbon-nitrogen hydrolase:NAD+ synthase 2047045..2048652 Nitrosomonas europaea ATCC 19718 1082853 NP_841919.1 CDS NE1897 NC_004757.1 2048717 2050270 D M48 family peptidase 2048717..2050270 Nitrosomonas europaea ATCC 19718 1082854 NP_841920.1 CDS NE1898 NC_004757.1 2050345 2051490 D hypothetical protein 2050345..2051490 Nitrosomonas europaea ATCC 19718 1082855 NP_841921.1 CDS NE1899 NC_004757.1 2051490 2052242 D ABC transporter ATPase 2051490..2052242 Nitrosomonas europaea ATCC 19718 1082856 NP_841922.1 CDS NE1900 NC_004757.1 2052239 2053462 D hypothetical protein 2052239..2053462 Nitrosomonas europaea ATCC 19718 1082857 NP_841923.1 CDS NE1901 NC_004757.1 2053858 2056776 D subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 2053858..2056776 Nitrosomonas europaea ATCC 19718 1082858 NP_841924.1 CDS NE1902 NC_004757.1 2056776 2057120 D subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2056776..2057120 Nitrosomonas europaea ATCC 19718 1082859 NP_841925.1 CDS phaD NC_004757.1 2057117 2058766 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 2057117..2058766 Nitrosomonas europaea ATCC 19718 1082860 NP_841926.1 CDS NE1904 NC_004757.1 2058763 2059248 D subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 2058763..2059248 Nitrosomonas europaea ATCC 19718 1082861 NP_841927.1 CDS phaF NC_004757.1 2059245 2059526 D subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit F 2059245..2059526 Nitrosomonas europaea ATCC 19718 1082862 NP_841928.1 CDS NE1906 NC_004757.1 2059523 2059948 D subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 2059523..2059948 Nitrosomonas europaea ATCC 19718 1082863 NP_841929.1 CDS NE1907 NC_004757.1 2060192 2060476 R hypothetical protein complement(2060192..2060476) Nitrosomonas europaea ATCC 19718 1082864 NP_841930.1 CDS NE1908 NC_004757.1 2060724 2061368 R glutathione S-transferase family protein complement(2060724..2061368) Nitrosomonas europaea ATCC 19718 1082865 NP_841931.1 CDS NE1909 NC_004757.1 2061632 2063482 R diguanylate cyclase/phosphodiesterase complement(2061632..2063482) Nitrosomonas europaea ATCC 19718 1082866 NP_841932.1 CDS yqaA NC_004757.1 2063794 2064282 D inner membrane protein 2063794..2064282 Nitrosomonas europaea ATCC 19718 1082867 NP_841933.1 CDS NE1911 NC_004757.1 2064316 2064624 R glutaredoxin-like protein complement(2064316..2064624) Nitrosomonas europaea ATCC 19718 1082868 NP_841934.1 CDS NE1912 NC_004757.1 2064788 2065657 R hemK fam: modification methylase complement(2064788..2065657) Nitrosomonas europaea ATCC 19718 1082869 NP_841935.1 CDS prfA NC_004757.1 2065654 2066733 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(2065654..2066733) Nitrosomonas europaea ATCC 19718 1082870 NP_841936.1 CDS hemA NC_004757.1 2066733 2067983 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(2066733..2067983) Nitrosomonas europaea ATCC 19718 1082871 NP_841937.1 CDS ispB NC_004757.1 2068170 2069138 D polyprenyl synthetase 2068170..2069138 Nitrosomonas europaea ATCC 19718 1082872 NP_841938.1 CDS NE1916 NC_004757.1 2069882 2070307 D hypothetical protein 2069882..2070307 Nitrosomonas europaea ATCC 19718 1082874 NP_841939.1 CDS NE1917 NC_004757.1 2070581 2070883 R hypothetical protein complement(2070581..2070883) Nitrosomonas europaea ATCC 19718 1082875 NP_841940.1 CDS cbbO NC_004757.1 2070904 2073231 R von Willebrand factor type A domain-containing protein complement(2070904..2073231) Nitrosomonas europaea ATCC 19718 1082876 NP_841941.1 CDS cbbQ NC_004757.1 2073273 2074076 R nitric oxide reductase NorQ protein complement(2073273..2074076) Nitrosomonas europaea ATCC 19718 1082877 NP_841942.1 CDS cbbS NC_004757.1 2074196 2074552 R ribulose bisphosphate carboxylase, small chain complement(2074196..2074552) Nitrosomonas europaea ATCC 19718 1082878 NP_841943.1 CDS rbcL NC_004757.1 2074616 2076037 R type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase complement(2074616..2076037) Nitrosomonas europaea ATCC 19718 1082879 NP_841944.1 CDS cbbR NC_004757.1 2076232 2077161 D transcription regulator LysR 2076232..2077161 Nitrosomonas europaea ATCC 19718 1082880 NP_841945.1 CDS cheY NC_004757.1 2077607 2078002 D response regulator receiver domain-containing protein 2077607..2078002 Nitrosomonas europaea ATCC 19718 1082881 NP_841946.1 CDS cheZ1 NC_004757.1 2078048 2078668 D chemotaxis protein CheZ 2078048..2078668 Nitrosomonas europaea ATCC 19718 1082882 NP_841947.1 CDS NE1925 NC_004757.1 2078725 2079768 R integrase catalytic subunit complement(2078725..2079768) Nitrosomonas europaea ATCC 19718 1082883 NP_841948.1 CDS NE1926 NC_004757.1 2079975 2080601 R carbonic anhydrase complement(2079975..2080601) Nitrosomonas europaea ATCC 19718 1082884 NP_841949.1 CDS NE1927 NC_004757.1 2080640 2082259 R Sulfate transporter complement(2080640..2082259) Nitrosomonas europaea ATCC 19718 1082885 NP_841950.1 CDS NE1928 NC_004757.1 2082566 2083132 R Smr domain-containing protein complement(2082566..2083132) Nitrosomonas europaea ATCC 19718 1082886 NP_841951.1 CDS trxB NC_004757.1 2083165 2084118 R FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2083165..2084118) Nitrosomonas europaea ATCC 19718 1082887 NP_841952.1 CDS alaS NC_004757.1 2084262 2086853 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2084262..2086853) Nitrosomonas europaea ATCC 19718 1082888 NP_841953.1 CDS recX NC_004757.1 2086913 2087353 R RecX regulatory protein complement(2086913..2087353) Nitrosomonas europaea ATCC 19718 1082889 NP_841954.1 CDS recA NC_004757.1 2087356 2088387 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2087356..2088387) Nitrosomonas europaea ATCC 19718 1082890 NP_841955.1 CDS adk NC_004757.1 2088557 2089327 D adenylate kinase 2088557..2089327 Nitrosomonas europaea ATCC 19718 1082891 NP_841956.1 CDS NE1934 NC_004757.1 2089391 2090650 D catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 2089391..2090650 Nitrosomonas europaea ATCC 19718 1082892 NP_841957.1 CDS hppA NC_004757.1 2090790 2092847 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 2090790..2092847 Nitrosomonas europaea ATCC 19718 1082893 NP_841958.1 CDS NE1936 NC_004757.1 2092868 2093125 R hypothetical protein complement(2092868..2093125) Nitrosomonas europaea ATCC 19718 1082894 NP_841959.1 CDS NE1937 NC_004757.1 2093220 2093951 D hypothetical protein 2093220..2093951 Nitrosomonas europaea ATCC 19718 1082895 NP_841960.1 CDS NE1940 NC_004757.1 2094814 2095764 R integrase catalytic subunit complement(2094814..2095764) Nitrosomonas europaea ATCC 19718 1082898 NP_841961.1 CDS NE1943 NC_004757.1 2096770 2097423 D hypothetical protein 2096770..2097423 Nitrosomonas europaea ATCC 19718 1082901 NP_841962.1 CDS NE1944 NC_004757.1 2097768 2098310 D hypothetical protein 2097768..2098310 Nitrosomonas europaea ATCC 19718 1082902 NP_841963.1 CDS NE1945 NC_004757.1 2098373 2099557 D FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2098373..2099557 Nitrosomonas europaea ATCC 19718 1082903 NP_841964.1 CDS NE1946 NC_004757.1 2099645 2100223 D TetR family regulatory protein 2099645..2100223 Nitrosomonas europaea ATCC 19718 1082904 NP_841965.1 CDS yjeP NC_004757.1 2100568 2103840 D hypothetical protein 2100568..2103840 Nitrosomonas europaea ATCC 19718 1082905 NP_841966.1 CDS dnaJ NC_004757.1 2103983 2105092 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(2103983..2105092) Nitrosomonas europaea ATCC 19718 1082906 NP_841967.1 CDS dnaK NC_004757.1 2105296 2107230 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(2105296..2107230) Nitrosomonas europaea ATCC 19718 1082907 NP_841968.1 CDS grpE NC_004757.1 2107292 2107879 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(2107292..2107879) Nitrosomonas europaea ATCC 19718 1082908 NP_841969.1 CDS NE1951 NC_004757.1 2108015 2109391 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2108015..2109391) Nitrosomonas europaea ATCC 19718 1082909 NP_841970.1 CDS NE1952 NC_004757.1 2109518 2110132 D glutathione S-transferase protein 2109518..2110132 Nitrosomonas europaea ATCC 19718 1082910 NP_841971.1 CDS NE1953 NC_004757.1 2110218 2110958 R rRNA methyltransferase complement(2110218..2110958) Nitrosomonas europaea ATCC 19718 1082911 NP_841972.1 CDS suhB NC_004757.1 2111003 2111830 D suhB; inositol monophosphatase (extragenic suppressor protein) 2111003..2111830 Nitrosomonas europaea ATCC 19718 1082912 NP_841973.1 CDS NE1955 NC_004757.1 2111861 2112766 D mce related protein 2111861..2112766 Nitrosomonas europaea ATCC 19718 1082913 NP_841974.1 CDS NE1956 NC_004757.1 2112766 2113383 D lipoprotein 2112766..2113383 Nitrosomonas europaea ATCC 19718 1082914 NP_841975.1 CDS NE1957 NC_004757.1 2113596 2114849 D Orn/DAP/Arg decarboxylase family protein 2113596..2114849 Nitrosomonas europaea ATCC 19718 1082915 NP_841976.1 CDS fdfT NC_004757.1 2114859 2115911 D squalene and phytoene synthase 2114859..2115911 Nitrosomonas europaea ATCC 19718 1082916 NP_841977.1 CDS pyrF NC_004757.1 2115906 2116601 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(2115906..2116601) Nitrosomonas europaea ATCC 19718 1082917 NP_841978.1 CDS ihfB NC_004757.1 2116967 2117284 R histone-like DNA-binding protein complement(2116967..2117284) Nitrosomonas europaea ATCC 19718 1082919 NP_841979.1 CDS rpsA NC_004757.1 2117293 2119011 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(2117293..2119011) Nitrosomonas europaea ATCC 19718 1082920 NP_841980.1 CDS cmk NC_004757.1 2119117 2119788 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(2119117..2119788) Nitrosomonas europaea ATCC 19718 1082921 NP_841981.1 CDS aroA NC_004757.1 2119969 2121264 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(2119969..2121264) Nitrosomonas europaea ATCC 19718 1082922 NP_841982.1 CDS NE1965 NC_004757.1 2121623 2121874 D hypothetical protein 2121623..2121874 Nitrosomonas europaea ATCC 19718 1082923 NP_841983.1 CDS topB NC_004757.1 2121919 2124417 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(2121919..2124417) Nitrosomonas europaea ATCC 19718 1082924 NP_841984.1 CDS smg NC_004757.1 2124545 2125003 R hypothetical protein complement(2124545..2125003) Nitrosomonas europaea ATCC 19718 1082925 NP_841985.1 CDS smf NC_004757.1 2125084 2126199 R SMF family protein complement(2125084..2126199) Nitrosomonas europaea ATCC 19718 1082926 NP_841986.1 CDS NE1969 NC_004757.1 2126305 2127333 R LysM domain-containing protein complement(2126305..2127333) Nitrosomonas europaea ATCC 19718 1082927 NP_841987.1 CDS def NC_004757.1 2127444 2128001 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2127444..2128001 Nitrosomonas europaea ATCC 19718 1082928 NP_841988.1 CDS fmt NC_004757.1 2128063 2129037 D formyl transferase N-terminus:methionyl-tRNA formyltransferase 2128063..2129037 Nitrosomonas europaea ATCC 19718 1082929 NP_841989.1 CDS NE1972 NC_004757.1 2129034 2130314 D sun; rRNA methylase 2129034..2130314 Nitrosomonas europaea ATCC 19718 1082930 NP_841990.1 CDS NE1973 NC_004757.1 2130370 2130927 D proline rich signal peptide protein 2130370..2130927 Nitrosomonas europaea ATCC 19718 1082931 NP_841991.1 CDS NE1974 NC_004757.1 2130981 2133110 D sensory transduction histidine kinase 2130981..2133110 Nitrosomonas europaea ATCC 19718 1082932 NP_841992.1 CDS NE1975 NC_004757.1 2133352 2134617 D similar to (NC_003112) nitrogen assimilation regulatory protein NtrX [Neisseria meningitidis MC58], evalue=2.00e-95, 46% identity; NtrX; nitrogen assimilation regulatory protein 2133352..2134617 Nitrosomonas europaea ATCC 19718 1082933 NP_841993.1 CDS miaA NC_004757.1 2135084 2136037 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(2135084..2136037) Nitrosomonas europaea ATCC 19718 1082936 NP_841994.1 CDS NE1977 NC_004757.1 2136194 2136385 D transmembrane protein 2136194..2136385 Nitrosomonas europaea ATCC 19718 1082937 NP_841995.1 CDS dnaE1 NC_004757.1 2136454 2139963 R dnaE1; DNA polymerase III (alpha chain) protein complement(2136454..2139963) Nitrosomonas europaea ATCC 19718 1082938 NP_841996.1 CDS NE1979 NC_004757.1 2140070 2141431 D U32 family peptidase 2140070..2141431 Nitrosomonas europaea ATCC 19718 1082939 NP_841997.1 CDS aroK NC_004757.1 2141563 2142198 D catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 2141563..2142198 Nitrosomonas europaea ATCC 19718 1082940 NP_841998.1 CDS aroB NC_004757.1 2142301 2143410 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 2142301..2143410 Nitrosomonas europaea ATCC 19718 1082941 NP_841999.1 CDS dgt NC_004757.1 2143403 2144527 D dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2143403..2144527 Nitrosomonas europaea ATCC 19718 1082942 NP_842000.1 CDS NE1983 NC_004757.1 2144656 2145354 D hypothetical protein 2144656..2145354 Nitrosomonas europaea ATCC 19718 1082943 NP_842001.1 CDS NE1984 NC_004757.1 2145407 2147062 R transmembrane protein complement(2145407..2147062) Nitrosomonas europaea ATCC 19718 1082944 NP_842002.1 CDS NE1985 NC_004757.1 2147070 2147363 R hypothetical protein complement(2147070..2147363) Nitrosomonas europaea ATCC 19718 1082945 NP_842003.1 CDS NE1986 NC_004757.1 2147365 2147631 R hypothetical protein complement(2147365..2147631) Nitrosomonas europaea ATCC 19718 1082946 NP_842004.1 CDS NE1989 NC_004757.1 2150245 2151255 R transmembrane sensor complement(2150245..2151255) Nitrosomonas europaea ATCC 19718 1082949 NP_842005.1 CDS NE1990 NC_004757.1 2151366 2151773 D transposase 2151366..2151773 Nitrosomonas europaea ATCC 19718 1082950 NP_842006.1 CDS NE1991 NC_004757.1 2151773 2152141 D IS4 family transposase 2151773..2152141 Nitrosomonas europaea ATCC 19718 1082951 NP_842007.1 CDS NE1992 NC_004757.1 2152247 2152786 R ECF subfamily RNA polymerase sigma factor complement(2152247..2152786) Nitrosomonas europaea ATCC 19718 1082952 NP_842008.1 CDS NE1993 NC_004757.1 2152864 2153154 D hypothetical protein 2152864..2153154 Nitrosomonas europaea ATCC 19718 1082953 NP_842009.1 CDS NE1994 NC_004757.1 2153359 2155314 R hypothetical protein complement(2153359..2155314) Nitrosomonas europaea ATCC 19718 1082954 NP_842010.1 CDS NE1995 NC_004757.1 2155540 2156391 R integrase catalytic subunit complement(2155540..2156391) Nitrosomonas europaea ATCC 19718 1082955 NP_842011.1 CDS NE1996 NC_004757.1 2156445 2156768 R transposase IS911 complement(2156445..2156768) Nitrosomonas europaea ATCC 19718 1082956 NP_842012.1 CDS NE1997 NC_004757.1 2157522 2158763 D glucose dehydrogenase 2157522..2158763 Nitrosomonas europaea ATCC 19718 1082957 NP_842013.1 CDS sohA NC_004757.1 2159012 2159341 D SohA; PrlF; involved in protein secretion; when overproduced or mutated, it induces growth defect and increased export of a reporter protein; a PrlF mutation induces the activity of the Lon protease, and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation; regulator PrlF 2159012..2159341 Nitrosomonas europaea ATCC 19718 1082958 NP_842014.1 CDS NE1999 NC_004757.1 2159338 2159841 D hypothetical protein 2159338..2159841 Nitrosomonas europaea ATCC 19718 1082959 NP_842015.1 CDS gabD NC_004757.1 2159943 2161274 R aldehyde dehydrogenase complement(2159943..2161274) Nitrosomonas europaea ATCC 19718 1082960 NP_842016.1 CDS NE2001 NC_004757.1 2161321 2162445 R hypothetical protein complement(2161321..2162445) Nitrosomonas europaea ATCC 19718 1082961 NP_842017.1 CDS NE2002 NC_004757.1 2162833 2163699 D hypothetical protein 2162833..2163699 Nitrosomonas europaea ATCC 19718 1082962 NP_842018.1 CDS NE2003 NC_004757.1 2163869 2164321 D nitric oxide reductase, cytochrome c-containing subunit 2163869..2164321 Nitrosomonas europaea ATCC 19718 1082963 NP_842019.1 CDS norB NC_004757.1 2164358 2165704 D cytochrome c oxidase subunit I 2164358..2165704 Nitrosomonas europaea ATCC 19718 1082964 NP_842020.1 CDS NE2005 NC_004757.1 2165754 2166533 D norQ protein 2165754..2166533 Nitrosomonas europaea ATCC 19718 1082965 NP_842021.1 CDS norD NC_004757.1 2166539 2168491 D von Willebrand factor type A domain-containing protein 2166539..2168491 Nitrosomonas europaea ATCC 19718 1082966 NP_842022.1 CDS NE2007 NC_004757.1 2169175 2169450 D hypothetical protein 2169175..2169450 Nitrosomonas europaea ATCC 19718 1082967 NP_842023.1 CDS NE2010 NC_004757.1 2172449 2172856 D transposase 2172449..2172856 Nitrosomonas europaea ATCC 19718 1082970 NP_842024.1 CDS NE2011 NC_004757.1 2172856 2173224 D IS4 family transposase 2172856..2173224 Nitrosomonas europaea ATCC 19718 1082971 NP_842025.1 CDS NE2012 NC_004757.1 2173285 2174235 D integrase catalytic subunit 2173285..2174235 Nitrosomonas europaea ATCC 19718 1082972 NP_842026.1 CDS NE2013 NC_004757.1 2174813 2175106 R hypothetical protein complement(2174813..2175106) Nitrosomonas europaea ATCC 19718 1082973 NP_842027.1 CDS NE2014 NC_004757.1 2176094 2176486 D hypothetical protein 2176094..2176486 Nitrosomonas europaea ATCC 19718 1082974 NP_842028.1 CDS NE2015 NC_004757.1 2176468 2177304 D capsular polysaccharide biosynthesis protein CapK 2176468..2177304 Nitrosomonas europaea ATCC 19718 1082975 NP_842029.1 CDS NE2016 NC_004757.1 2177316 2178653 D hypothetical protein 2177316..2178653 Nitrosomonas europaea ATCC 19718 1082976 NP_842030.1 CDS NE2017 NC_004757.1 2178657 2179331 D hypothetical protein 2178657..2179331 Nitrosomonas europaea ATCC 19718 1082977 NP_842031.1 CDS NE2018 NC_004757.1 2179502 2180509 D glycosyl transferase family protein 2179502..2180509 Nitrosomonas europaea ATCC 19718 1082978 NP_842032.1 CDS NE2019 NC_004757.1 2180506 2181492 D glycosyl transferase family protein 2180506..2181492 Nitrosomonas europaea ATCC 19718 1082979 NP_842033.1 CDS ggaB NC_004757.1 2181492 2183459 D similar to (AF112478) bifunctional polymerase [Neisseria meningitidis], evalue=8.00e-46, 30% identity; galactosamine-containing minor teichoic acid biosynthesis 2181492..2183459 Nitrosomonas europaea ATCC 19718 1082980 NP_842034.1 CDS NE2021 NC_004757.1 2183474 2184754 R group 1 glycosyl transferase complement(2183474..2184754) Nitrosomonas europaea ATCC 19718 1082981 NP_842035.1 CDS exoT NC_004757.1 2184657 2186162 R polysaccharide biosynthesis protein complement(2184657..2186162) Nitrosomonas europaea ATCC 19718 1082982 NP_842036.1 CDS NE2023 NC_004757.1 2186571 2186978 D transposase 2186571..2186978 Nitrosomonas europaea ATCC 19718 1082983 NP_842037.1 CDS NE2024 NC_004757.1 2186978 2187346 D IS4 family transposase 2186978..2187346 Nitrosomonas europaea ATCC 19718 1082984 NP_842038.1 CDS NE2028 NC_004757.1 2188842 2189804 R integrase catalytic subunit complement(2188842..2189804) Nitrosomonas europaea ATCC 19718 1082988 NP_842039.1 CDS glgB NC_004757.1 2190147 2192351 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(2190147..2192351) Nitrosomonas europaea ATCC 19718 1082989 NP_842040.1 CDS glgC NC_004757.1 2192468 2193769 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 2192468..2193769 Nitrosomonas europaea ATCC 19718 1082990 NP_842041.1 CDS NE2031 NC_004757.1 2193836 2195557 D glycosyl hydrolase family protein 2193836..2195557 Nitrosomonas europaea ATCC 19718 1082991 NP_842042.1 CDS amyA NC_004757.1 2195628 2197640 D glycosyl hydrolase family protein 2195628..2197640 Nitrosomonas europaea ATCC 19718 1082992 NP_842043.1 CDS NE2033 NC_004757.1 2197768 2200464 D hypothetical protein 2197768..2200464 Nitrosomonas europaea ATCC 19718 1082993 NP_842044.1 CDS NE2034 NC_004757.1 2200702 2201898 D inner membrane protein 2200702..2201898 Nitrosomonas europaea ATCC 19718 1082994 NP_842045.1 CDS NE2035 NC_004757.1 2201895 2202137 D hypothetical protein 2201895..2202137 Nitrosomonas europaea ATCC 19718 1082995 NP_842046.1 CDS acrD4 NC_004757.1 2202225 2205311 R acriflavin resistance protein complement(2202225..2205311) Nitrosomonas europaea ATCC 19718 1082996 NP_842047.1 CDS NE2037 NC_004757.1 2205308 2206402 R cation-efflux system signal peptide protein complement(2205308..2206402) Nitrosomonas europaea ATCC 19718 1082997 NP_842048.1 CDS NE2038 NC_004757.1 2207237 2208751 R myeloperoxidase thyroid peroxidase cyclooxygenase catalytic subunit complement(2207237..2208751) Nitrosomonas europaea ATCC 19718 1082998 NP_842049.1 CDS NE2039 NC_004757.1 2208755 2209015 R hypothetical protein complement(2208755..2209015) Nitrosomonas europaea ATCC 19718 1082999 NP_842050.1 CDS rhlE NC_004757.1 2209232 2210728 R rhlE; ATP-dependent RNA helicase RhlE complement(2209232..2210728) Nitrosomonas europaea ATCC 19718 1083000 NP_842051.1 CDS NE2041 NC_004757.1 2210886 2211683 R hypothetical protein complement(2210886..2211683) Nitrosomonas europaea ATCC 19718 1083001 NP_842052.1 CDS cycA2 NC_004757.1 2211937 2212644 R similar to Cytochrome c-554 precursor (C554) (Hydroxylamine oxidoreductase-linked cytochrome) pir||A59036 cytochrome c554, tetraheme, precursor - Nitrosomonas europaea; cytochrome c-554 complement(2211937..2212644) Nitrosomonas europaea ATCC 19718 1083002 NP_842053.1 CDS NE2043 NC_004757.1 2212700 2213809 R hypothetical protein complement(2212700..2213809) Nitrosomonas europaea ATCC 19718 1083003 NP_842054.1 CDS hao1 NC_004757.1 2213806 2215518 R similar to (AB030386) hydroxylamine oxidoreductase [Nitrosomonas sp. ENI-11], evalue=0.00e+00, 95% identity; hydroxylamine oxidoreductase complement(2213806..2215518) Nitrosomonas europaea ATCC 19718 1083004 NP_842055.1 CDS rpoC NC_004757.1 2215733 2219947 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(2215733..2219947) Nitrosomonas europaea ATCC 19718 1083005 NP_842056.1 CDS rpoB NC_004757.1 2220094 2224167 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(2220094..2224167) Nitrosomonas europaea ATCC 19718 1083006 NP_842057.1 CDS rplL NC_004757.1 2224503 2224877 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(2224503..2224877) Nitrosomonas europaea ATCC 19718 1083007 NP_842058.1 CDS rplJ NC_004757.1 2224948 2225463 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(2224948..2225463) Nitrosomonas europaea ATCC 19718 1083008 NP_842059.2 CDS rplA NC_004757.1 2225768 2226460 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(2225768..2226460) Nitrosomonas europaea ATCC 19718 1083009 NP_842060.1 CDS rplK NC_004757.1 2226462 2226893 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(2226462..2226893) Nitrosomonas europaea ATCC 19718 1083010 NP_842061.1 CDS nusG NC_004757.1 2227018 2227551 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(2227018..2227551) Nitrosomonas europaea ATCC 19718 1083011 NP_842062.1 CDS tuf2 NC_004757.1 2228137 2229327 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(2228137..2229327) Nitrosomonas europaea ATCC 19718 1083013 NP_842063.1 CDS fusA1 NC_004757.1 2229358 2231448 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(2229358..2231448) Nitrosomonas europaea ATCC 19718 1083014 NP_842064.1 CDS rpsG NC_004757.1 2231521 2231991 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(2231521..2231991) Nitrosomonas europaea ATCC 19718 1083015 NP_842065.1 CDS rpsL NC_004757.1 2232068 2232445 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(2232068..2232445) Nitrosomonas europaea ATCC 19718 1083016 NP_842066.1 CDS NE2056 NC_004757.1 2232831 2233379 R hypothetical protein complement(2232831..2233379) Nitrosomonas europaea ATCC 19718 1083017 NP_842067.1 CDS NE2057 NC_004757.1 2233804 2234361 R hypothetical protein complement(2233804..2234361) Nitrosomonas europaea ATCC 19718 1083018 NP_842068.1 CDS NE2058 NC_004757.1 2234477 2236624 R cytochrome c, class IC:cytochrome c, class I complement(2234477..2236624) Nitrosomonas europaea ATCC 19718 1083019 NP_842069.1 CDS NE2059 NC_004757.1 2236643 2237065 R copper export proteins complement(2236643..2237065) Nitrosomonas europaea ATCC 19718 1083020 NP_842070.1 CDS NE2060 NC_004757.1 2237159 2237713 R hypothetical protein complement(2237159..2237713) Nitrosomonas europaea ATCC 19718 1083021 NP_842071.1 CDS NE2061 NC_004757.1 2237798 2238433 R hypothetical protein complement(2237798..2238433) Nitrosomonas europaea ATCC 19718 1083022 NP_842072.1 CDS amoB2 NC_004757.1 2238597 2239859 R ammonia monooxygenase subunit B complement(2238597..2239859) Nitrosomonas europaea ATCC 19718 1083023 NP_842073.1 CDS amoA2 NC_004757.1 2239861 2240691 R ammonia monooxygenase subunit A complement(2239861..2240691) Nitrosomonas europaea ATCC 19718 1083024 NP_842074.1 CDS amoC2 NC_004757.1 2240855 2241670 R similar to (AB079055) ammonia monooxygenase subunit C2 [Nitrosomonas sp. ENI-11], evalue=1.0e-160, 95% identity; ammonia monooxygenase subunit C complement(2240855..2241670) Nitrosomonas europaea ATCC 19718 1083025 NP_842075.1 CDS NE2065 NC_004757.1 2243003 2243923 R rare lipoprotein A complement(2243003..2243923) Nitrosomonas europaea ATCC 19718 1083026 NP_842076.1 CDS mdrB NC_004757.1 2243928 2245037 R cell cycle proteins complement(2243928..2245037) Nitrosomonas europaea ATCC 19718 1083027 NP_842077.1 CDS NE2067 NC_004757.1 2245148 2247025 R penicillin binding protein transpeptidase domain-containing protein complement(2245148..2247025) Nitrosomonas europaea ATCC 19718 1083028 NP_842078.1 CDS mreD NC_004757.1 2247022 2247573 R rod shape-determining MreD transmembrane protein complement(2247022..2247573) Nitrosomonas europaea ATCC 19718 1083029 NP_842079.1 CDS mreC NC_004757.1 2247530 2248447 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(2247530..2248447) Nitrosomonas europaea ATCC 19718 1083030 NP_842080.1 CDS mreB NC_004757.1 2248810 2249871 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(2248810..2249871) Nitrosomonas europaea ATCC 19718 1083031 NP_842081.1 CDS gatC NC_004757.1 2250030 2250317 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 2250030..2250317 Nitrosomonas europaea ATCC 19718 1083032 NP_842082.1 CDS gatA NC_004757.1 2250380 2251840 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2250380..2251840 Nitrosomonas europaea ATCC 19718 1083033 NP_842083.1 CDS gatB NC_004757.1 2251896 2253332 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2251896..2253332 Nitrosomonas europaea ATCC 19718 1083034 NP_842084.1 CDS NE2074 NC_004757.1 2253952 2254386 R HSP20 family protein complement(2253952..2254386) Nitrosomonas europaea ATCC 19718 1083035 NP_842085.1 CDS NE2075 NC_004757.1 2254620 2257505 R diguanylate cyclase/phosphodiesterase complement(2254620..2257505) Nitrosomonas europaea ATCC 19718 1083036 NP_842086.1 CDS NE2076 NC_004757.1 2257505 2259325 R LysM domain-containing protein complement(2257505..2259325) Nitrosomonas europaea ATCC 19718 1083037 NP_842087.1 CDS NE2077 NC_004757.1 2259410 2260438 D hypothetical protein 2259410..2260438 Nitrosomonas europaea ATCC 19718 1083038 NP_842088.1 CDS ylqH NC_004757.1 2260425 2260784 D flagellar biosynthetic protein 2260425..2260784 Nitrosomonas europaea ATCC 19718 1083039 NP_842089.1 CDS NE2079 NC_004757.1 2260927 2261724 R hypothetical protein complement(2260927..2261724) Nitrosomonas europaea ATCC 19718 1083040 NP_842090.1 CDS fliE NC_004757.1 2261756 2262085 R forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE complement(2261756..2262085) Nitrosomonas europaea ATCC 19718 1083041 NP_842091.1 CDS NE2081 NC_004757.1 2262244 2263557 R similar to (NC_002505) sigma-54 dependent response regulator [Vibrio cholerae], evalue=1.00e-116, 52% identity; sigma-54 dependent response regulator complement(2262244..2263557) Nitrosomonas europaea ATCC 19718 1083042 NP_842092.1 CDS fleS NC_004757.1 2263571 2264806 R two-component sensor complement(2263571..2264806) Nitrosomonas europaea ATCC 19718 1083043 NP_842093.1 CDS fliF NC_004757.1 2265038 2266684 D flagellar M-ring transmembrane protein FliF 2265038..2266684 Nitrosomonas europaea ATCC 19718 1083044 NP_842094.1 CDS fliG NC_004757.1 2266674 2267669 D flagellar motor switch protein FliG 2266674..2267669 Nitrosomonas europaea ATCC 19718 1083045 NP_842095.1 CDS fliH NC_004757.1 2267867 2268586 D flagellar assembly protein FliH 2267867..2268586 Nitrosomonas europaea ATCC 19718 1083046 NP_842096.1 CDS fliI NC_004757.1 2268583 2270019 D flagellar ATP synthase 2268583..2270019 Nitrosomonas europaea ATCC 19718 1083047 NP_842097.1 CDS fliJ NC_004757.1 2270037 2270489 D flagellar FliJ protein 2270037..2270489 Nitrosomonas europaea ATCC 19718 1083048 NP_842098.1 CDS NE2088 NC_004757.1 2270548 2271693 D flagellar hook-length control protein 2270548..2271693 Nitrosomonas europaea ATCC 19718 1083049 NP_842099.1 CDS NE2089 NC_004757.1 2271959 2274154 D ice nucleation protein 2271959..2274154 Nitrosomonas europaea ATCC 19718 1083050 NP_842100.1 CDS NE2090 NC_004757.1 2274342 2274968 D hypothetical protein 2274342..2274968 Nitrosomonas europaea ATCC 19718 1083051 NP_842101.1 CDS NE2091 NC_004757.1 2274961 2275983 D hypothetical protein 2274961..2275983 Nitrosomonas europaea ATCC 19718 1083052 NP_842102.1 CDS NE2092 NC_004757.1 2276159 2279728 D TPR repeat-containing glycosyl transferase 2276159..2279728 Nitrosomonas europaea ATCC 19718 1083053 NP_842103.1 CDS NE2093 NC_004757.1 2279703 2280452 D hypothetical protein 2279703..2280452 Nitrosomonas europaea ATCC 19718 1083054 NP_842104.1 CDS NE2094 NC_004757.1 2280753 2281766 D hypothetical protein 2280753..2281766 Nitrosomonas europaea ATCC 19718 1083055 NP_842105.1 CDS NE2095 NC_004757.1 2281776 2283509 D hypothetical protein 2281776..2283509 Nitrosomonas europaea ATCC 19718 1083056 NP_842106.1 CDS NE2096 NC_004757.1 2283635 2283958 D transposase IS911 2283635..2283958 Nitrosomonas europaea ATCC 19718 1083057 NP_842107.1 CDS NE2097 NC_004757.1 2284248 2284862 D integrase catalytic subunit 2284248..2284862 Nitrosomonas europaea ATCC 19718 1083058 NP_842108.1 CDS NE2098 NC_004757.1 2285687 2287000 D Leon G., Roy P.H., J. Bact. 185(6):2036-2041(2003); integron/retron-type RNA-directed DNA polymerase 2285687..2287000 Nitrosomonas europaea ATCC 19718 1083059 NP_842109.1 CDS NE2099 NC_004757.1 2287493 2288002 R hypothetical protein complement(2287493..2288002) Nitrosomonas europaea ATCC 19718 1083060 NP_842110.1 CDS NE2100 NC_004757.1 2288019 2288522 R hypothetical protein complement(2288019..2288522) Nitrosomonas europaea ATCC 19718 1083061 NP_842111.1 CDS NE2101 NC_004757.1 2289108 2289320 D hypothetical protein 2289108..2289320 Nitrosomonas europaea ATCC 19718 1083062 NP_842112.1 CDS NE2102 NC_004757.1 2289895 2290194 R hypothetical protein complement(2289895..2290194) Nitrosomonas europaea ATCC 19718 1083063 NP_842113.1 CDS NE2103 NC_004757.1 2290451 2290702 R CopG family transcriptional regulator complement(2290451..2290702) Nitrosomonas europaea ATCC 19718 1083064 NP_842114.1 CDS NE2104 NC_004757.1 2290692 2290955 R hypothetical protein complement(2290692..2290955) Nitrosomonas europaea ATCC 19718 1083065 NP_842115.1 CDS NE2105 NC_004757.1 2291322 2291561 R hypothetical protein complement(2291322..2291561) Nitrosomonas europaea ATCC 19718 1083066 NP_842116.1 CDS NE2106 NC_004757.1 2291972 2292427 D hypothetical protein 2291972..2292427 Nitrosomonas europaea ATCC 19718 1083067 NP_842117.1 CDS NE2107 NC_004757.1 2292427 2292885 D hypothetical protein 2292427..2292885 Nitrosomonas europaea ATCC 19718 1083068 NP_842118.1 CDS NE2108 NC_004757.1 2292950 2293801 R integrase catalytic subunit complement(2292950..2293801) Nitrosomonas europaea ATCC 19718 1083069 NP_842119.1 CDS NE2109 NC_004757.1 2293855 2294178 R transposase IS911 complement(2293855..2294178) Nitrosomonas europaea ATCC 19718 1083070 NP_842120.1 CDS NE2110 NC_004757.1 2294670 2295725 R AsnC family regulatory protein complement(2294670..2295725) Nitrosomonas europaea ATCC 19718 1083071 NP_842121.1 CDS NE2111 NC_004757.1 2296116 2296373 D hypothetical protein 2296116..2296373 Nitrosomonas europaea ATCC 19718 1083072 NP_842122.1 CDS NE2112 NC_004757.1 2296379 2296795 D PilT domain-containing protein 2296379..2296795 Nitrosomonas europaea ATCC 19718 1083073 NP_842123.1 CDS NE2113 NC_004757.1 2297218 2297613 D hypothetical protein 2297218..2297613 Nitrosomonas europaea ATCC 19718 1083074 NP_842124.1 CDS NE2114 NC_004757.1 2297645 2297989 R plasmid stabilization protein ParE complement(2297645..2297989) Nitrosomonas europaea ATCC 19718 1083075 NP_842125.1 CDS NE2115 NC_004757.1 2297986 2298231 R hypothetical protein complement(2297986..2298231) Nitrosomonas europaea ATCC 19718 1083076 NP_842126.1 CDS NE2119 NC_004757.1 2299357 2300505 D hypothetical protein 2299357..2300505 Nitrosomonas europaea ATCC 19718 1083080 NP_842127.1 CDS NE2121 NC_004757.1 2301589 2303139 D hypothetical protein 2301589..2303139 Nitrosomonas europaea ATCC 19718 1083082 NP_842128.1 CDS nadC NC_004757.1 2303227 2304081 R bifunctional nicotinate-nucleotide pyrophosphorylase/quinolinate phosphoribosyltransferase NadC complement(2303227..2304081) Nitrosomonas europaea ATCC 19718 1083083 NP_842129.1 CDS NE2123 NC_004757.1 2304125 2305618 D ferredoxin-dependent glutamate synthase 2304125..2305618 Nitrosomonas europaea ATCC 19718 1083084 NP_842130.1 CDS NE2124 NC_004757.1 2306060 2308258 D TonB-dependent receptor protein 2306060..2308258 Nitrosomonas europaea ATCC 19718 1083085 NP_842131.1 CDS fiu NC_004757.1 2308275 2308958 D hydroxylase 2308275..2308958 Nitrosomonas europaea ATCC 19718 1083086 NP_842132.1 CDS NE2126 NC_004757.1 2308958 2310043 D glycolate oxidase, (S)-2-hydroxy-acid oxidase, peroxisomal 2308958..2310043 Nitrosomonas europaea ATCC 19718 1083087 NP_842133.1 CDS pgsA NC_004757.1 2310169 2310747 R pgsA: CDP-diacylglycerol--glycerol-3-phosphatidyltransferase complement(2310169..2310747) Nitrosomonas europaea ATCC 19718 1083088 NP_842134.1 CDS rnk NC_004757.1 2312486 2312899 R transcription elongation factor GreA/GreB complement(2312486..2312899) Nitrosomonas europaea ATCC 19718 1083091 NP_842135.1 CDS phoB NC_004757.1 2313178 2313900 R response regulator PhoB complement(2313178..2313900) Nitrosomonas europaea ATCC 19718 1083092 NP_842136.1 CDS lysC NC_004757.1 2314607 2315854 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(2314607..2315854) Nitrosomonas europaea ATCC 19718 1083094 NP_842137.1 CDS NE2133 NC_004757.1 2316050 2316637 R peptidoglycan binding domain-containing protein complement(2316050..2316637) Nitrosomonas europaea ATCC 19718 1083095 NP_842138.1 CDS ackA2 NC_004757.1 2316814 2318064 D acetate and butyrate kinase:acetate kinase 2316814..2318064 Nitrosomonas europaea ATCC 19718 1083096 NP_842139.1 CDS NE2135 NC_004757.1 2318109 2320481 D phosphoketolase 2318109..2320481 Nitrosomonas europaea ATCC 19718 1083097 NP_842140.1 CDS tal NC_004757.1 2320780 2321874 R catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase complement(2320780..2321874) Nitrosomonas europaea ATCC 19718 1083098 NP_842141.1 CDS NE2137 NC_004757.1 2322115 2323395 D methylamine utilization protein MauG 2322115..2323395 Nitrosomonas europaea ATCC 19718 1083099 NP_842142.1 CDS NE2138 NC_004757.1 2323604 2324113 D ECF subfamily RNA polymerase sigma factor 2323604..2324113 Nitrosomonas europaea ATCC 19718 1083100 NP_842143.1 CDS NE2139 NC_004757.1 2324120 2325082 D transmembrane sensor 2324120..2325082 Nitrosomonas europaea ATCC 19718 1083101 NP_842144.1 CDS NE2140 NC_004757.1 2325161 2327458 D TonB-dependent receptor protein 2325161..2327458 Nitrosomonas europaea ATCC 19718 1083102 NP_842145.1 CDS NE2141 NC_004757.1 2327519 2328838 D sodium/dicarboxylate symporter family protein 2327519..2328838 Nitrosomonas europaea ATCC 19718 1083103 NP_842146.1 CDS NE2142 NC_004757.1 2328995 2329309 D hypothetical protein 2328995..2329309 Nitrosomonas europaea ATCC 19718 1083104 NP_842147.1 CDS rps4 NC_004757.1 2329323 2329940 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 2329323..2329940 Nitrosomonas europaea ATCC 19718 1083105 NP_842148.1 CDS NE2144 NC_004757.1 2330053 2330919 R hypothetical protein complement(2330053..2330919) Nitrosomonas europaea ATCC 19718 1083106 NP_842149.1 CDS NE2145 NC_004757.1 2331124 2331633 R hypothetical protein complement(2331124..2331633) Nitrosomonas europaea ATCC 19718 1083107 NP_842150.1 CDS NE2146 NC_004757.1 2331664 2332008 R hypothetical protein complement(2331664..2332008) Nitrosomonas europaea ATCC 19718 1083108 NP_842151.1 CDS pepP NC_004757.1 2331984 2333312 R M24 family metallopeptidase complement(2331984..2333312) Nitrosomonas europaea ATCC 19718 1083109 NP_842152.1 CDS cbbE NC_004757.1 2333465 2334145 D ribulose-phosphate 3-epimerase 2333465..2334145 Nitrosomonas europaea ATCC 19718 1083110 NP_842153.1 CDS cbbZ NC_004757.1 2334165 2334887 D catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 2334165..2334887 Nitrosomonas europaea ATCC 19718 1083111 NP_842154.1 CDS trpE NC_004757.1 2334991 2336478 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2334991..2336478 Nitrosomonas europaea ATCC 19718 1083112 NP_842155.1 CDS NE2151 NC_004757.1 2336578 2337003 R hypothetical protein complement(2336578..2337003) Nitrosomonas europaea ATCC 19718 1083113 NP_842156.1 CDS NE2152 NC_004757.1 2337026 2337364 R hypothetical protein complement(2337026..2337364) Nitrosomonas europaea ATCC 19718 1083114 NP_842157.1 CDS NE2153 NC_004757.1 2337473 2338129 D hypothetical protein 2337473..2338129 Nitrosomonas europaea ATCC 19718 1083115 NP_842158.1 CDS NE2154 NC_004757.1 2338233 2339414 D hypothetical protein 2338233..2339414 Nitrosomonas europaea ATCC 19718 1083116 NP_842159.1 CDS NE2155 NC_004757.1 2339500 2340351 R integrase catalytic subunit complement(2339500..2340351) Nitrosomonas europaea ATCC 19718 1083117 NP_842160.1 CDS NE2156 NC_004757.1 2340405 2340728 R transposase IS911 complement(2340405..2340728) Nitrosomonas europaea ATCC 19718 1083118 NP_842161.1 CDS NE2157 NC_004757.1 2340776 2342578 R dihydrolipoamide dehydrogenase complement(2340776..2342578) Nitrosomonas europaea ATCC 19718 1083119 NP_842162.1 CDS proA NC_004757.1 2342559 2343827 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(2342559..2343827) Nitrosomonas europaea ATCC 19718 1083120 NP_842163.1 CDS NE2159 NC_004757.1 2343889 2344563 R hypothetical protein complement(2343889..2344563) Nitrosomonas europaea ATCC 19718 1083121 NP_842164.1 CDS NE2160 NC_004757.1 2344663 2345220 R hypothetical protein complement(2344663..2345220) Nitrosomonas europaea ATCC 19718 1083122 NP_842165.1 CDS NE2161 NC_004757.1 2345214 2346086 R esterase/lipase/thioesterase family protein complement(2345214..2346086) Nitrosomonas europaea ATCC 19718 1083123 NP_842166.1 CDS NE2162 NC_004757.1 2346083 2346919 R esterase/lipase/thioesterase family protein complement(2346083..2346919) Nitrosomonas europaea ATCC 19718 1083124 NP_842167.1 CDS NE2163 NC_004757.1 2346926 2347177 R hypothetical protein complement(2346926..2347177) Nitrosomonas europaea ATCC 19718 1083125 NP_842168.1 CDS lpxK NC_004757.1 2347387 2348577 D tetraacyldisaccharide-1-P 4'-kinase 2347387..2348577 Nitrosomonas europaea ATCC 19718 1083126 NP_842169.1 CDS NE2165 NC_004757.1 2348703 2351255 R TonB-dependent receptor protein complement(2348703..2351255) Nitrosomonas europaea ATCC 19718 1083127 NP_842170.1 CDS NE2166 NC_004757.1 2351482 2354949 R UvrD/REP helicase complement(2351482..2354949) Nitrosomonas europaea ATCC 19718 1083128 NP_842171.1 CDS NE2167 NC_004757.1 2355232 2356377 R catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase complement(2355232..2356377) Nitrosomonas europaea ATCC 19718 1083129 NP_842172.1 CDS NE2168 NC_004757.1 2356374 2358623 R hypothetical protein complement(2356374..2358623) Nitrosomonas europaea ATCC 19718 1083130 NP_842173.1 CDS NE2169 NC_004757.1 2358631 2359506 R Generic methyltransferase complement(2358631..2359506) Nitrosomonas europaea ATCC 19718 1083131 NP_842174.1 CDS NE2170 NC_004757.1 2359503 2359937 R hypothetical protein complement(2359503..2359937) Nitrosomonas europaea ATCC 19718 1083132 NP_842175.1 CDS NE2171 NC_004757.1 2359934 2360719 R formyl transferase N-terminus complement(2359934..2360719) Nitrosomonas europaea ATCC 19718 1083133 NP_842176.1 CDS NE2172 NC_004757.1 2360723 2361361 R SAM-binding motif-containing protein complement(2360723..2361361) Nitrosomonas europaea ATCC 19718 1083134 NP_842177.1 CDS NE2173 NC_004757.1 2361342 2362271 R glycosyl transferase family protein complement(2361342..2362271) Nitrosomonas europaea ATCC 19718 1083135 NP_842178.1 CDS NE2174 NC_004757.1 2362394 2362726 R hypothetical protein complement(2362394..2362726) Nitrosomonas europaea ATCC 19718 1083136 NP_842179.1 CDS NE2175 NC_004757.1 2362713 2362952 R hypothetical protein complement(2362713..2362952) Nitrosomonas europaea ATCC 19718 1083137 NP_842180.1 CDS NE2176 NC_004757.1 2363012 2363704 R hypothetical protein complement(2363012..2363704) Nitrosomonas europaea ATCC 19718 1083138 NP_842181.1 CDS NE2177 NC_004757.1 2363701 2365269 R hypothetical protein complement(2363701..2365269) Nitrosomonas europaea ATCC 19718 1083139 NP_842182.1 CDS NE2178 NC_004757.1 2365414 2368143 R hypothetical protein complement(2365414..2368143) Nitrosomonas europaea ATCC 19718 1083140 NP_842183.1 CDS NE2179 NC_004757.1 2368230 2368769 D hypothetical protein 2368230..2368769 Nitrosomonas europaea ATCC 19718 1083141 NP_842184.1 CDS holB NC_004757.1 2368779 2369840 R DNA polymerase III subunit delta' complement(2368779..2369840) Nitrosomonas europaea ATCC 19718 1083142 NP_842185.1 CDS tmk NC_004757.1 2369966 2370613 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(2369966..2370613) Nitrosomonas europaea ATCC 19718 1083143 NP_842186.1 CDS ampD NC_004757.1 2370691 2371242 D N-acetyl-anhydromuranmyl-L-alanine amidase 2370691..2371242 Nitrosomonas europaea ATCC 19718 1083144 NP_842187.1 CDS NE2183 NC_004757.1 2371400 2371804 D hypothetical protein 2371400..2371804 Nitrosomonas europaea ATCC 19718 1083145 NP_842188.1 CDS ptsH NC_004757.1 2371794 2372063 D phosphocarrier HPr protein 2371794..2372063 Nitrosomonas europaea ATCC 19718 1083146 NP_842189.1 CDS ptsI NC_004757.1 2372060 2373787 D PEP-utilizing protein 2372060..2373787 Nitrosomonas europaea ATCC 19718 1083147 NP_842190.1 CDS metX NC_004757.1 2373891 2375024 D Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 2373891..2375024 Nitrosomonas europaea ATCC 19718 1083148 NP_842191.1 CDS metW NC_004757.1 2375137 2375667 D SAM-binding motif-containing protein 2375137..2375667 Nitrosomonas europaea ATCC 19718 1083149 NP_842192.1 CDS NE2188 NC_004757.1 2376254 2376541 R hypothetical protein complement(2376254..2376541) Nitrosomonas europaea ATCC 19718 1083150 NP_842193.1 CDS intINeu NC_004757.1 2376658 2377629 R Leon G., Roy P.H., J. Bact. 185(6):2036-2041(2003); integron integrase complement(2376658..2377629) Nitrosomonas europaea ATCC 19718 1083151 NP_842194.1 CDS attINeu NC_004757.1 2377770 2378141 D Leon G., Roy P.H., J. Bact. 185(6):2036-2041(2003); qacE-like protein; integron orf 2377770..2378141 Nitrosomonas europaea ATCC 19718 1083152 NP_842195.1 CDS NE2190 NC_004757.1 2378248 2379561 R Leon G., Roy P.H., J. Bact. 185(6):2036-2041(2003); integron/retron-type RNA-directed DNA polymerase complement(2378248..2379561) Nitrosomonas europaea ATCC 19718 1083153 NP_842196.1 CDS ampG NC_004757.1 2380302 2381669 R transport transmembrane protein complement(2380302..2381669) Nitrosomonas europaea ATCC 19718 1083154 NP_842197.1 CDS xthA2 NC_004757.1 2381666 2382439 R exodeoxyribonuclease III:exodeoxyribonuclease III xth complement(2381666..2382439) Nitrosomonas europaea ATCC 19718 1083155 NP_842198.1 CDS NE2193 NC_004757.1 2382451 2382801 R hypothetical protein complement(2382451..2382801) Nitrosomonas europaea ATCC 19718 1083156 NP_842199.1 CDS NE2194 NC_004757.1 2382990 2383526 R hypothetical protein complement(2382990..2383526) Nitrosomonas europaea ATCC 19718 1083157 NP_842200.1 CDS pmbA NC_004757.1 2383768 2385135 D modulator of DNA gyrase 2383768..2385135 Nitrosomonas europaea ATCC 19718 1083158 NP_842201.1 CDS NE2196 NC_004757.1 2385211 2386131 D hypothetical protein 2385211..2386131 Nitrosomonas europaea ATCC 19718 1083159 NP_842202.1 CDS tex NC_004757.1 2386220 2388625 R S1 RNA-binding domain-containing protein complement(2386220..2388625) Nitrosomonas europaea ATCC 19718 1083160 NP_842203.1 CDS NE2198 NC_004757.1 2388972 2389286 R hypothetical protein complement(2388972..2389286) Nitrosomonas europaea ATCC 19718 1083161 NP_842204.1 CDS NE2199 NC_004757.1 2389372 2390649 R flavin-containing monooxygenase (FMO) complement(2389372..2390649) Nitrosomonas europaea ATCC 19718 1083162 NP_842205.1 CDS NE2200 NC_004757.1 2390793 2391161 D transposase 2390793..2391161 Nitrosomonas europaea ATCC 19718 1083163 NP_842206.1 CDS NE2201 NC_004757.1 2390966 2391541 D IS4 family transposase 2390966..2391541 Nitrosomonas europaea ATCC 19718 1083164 NP_842207.1 CDS NE2205 NC_004757.1 2393813 2394607 D short-chain dehydrogenase/reductase 2393813..2394607 Nitrosomonas europaea ATCC 19718 1083168 NP_842208.1 CDS ppiD NC_004757.1 2394658 2396550 R PpiC-type peptidyl-prolyl cis-trans isomerase complement(2394658..2396550) Nitrosomonas europaea ATCC 19718 1083169 NP_842209.1 CDS hupB NC_004757.1 2396895 2397167 R histone-like DNA-binding protein complement(2396895..2397167) Nitrosomonas europaea ATCC 19718 1083172 NP_842210.1 CDS gpsA NC_004757.1 2397380 2398369 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(2397380..2398369) Nitrosomonas europaea ATCC 19718 1083173 NP_842211.1 CDS NE2209 NC_004757.1 2398366 2398854 R hypothetical protein complement(2398366..2398854) Nitrosomonas europaea ATCC 19718 1083174 NP_842212.1 CDS secB NC_004757.1 2398858 2399343 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(2398858..2399343) Nitrosomonas europaea ATCC 19718 1083175 NP_842213.1 CDS grxC NC_004757.1 2399418 2399675 R glutaredoxin complement(2399418..2399675) Nitrosomonas europaea ATCC 19718 1083176 NP_842214.1 CDS NE2212 NC_004757.1 2399707 2400129 R transmembrane protein complement(2399707..2400129) Nitrosomonas europaea ATCC 19718 1083177 NP_842215.1 CDS argJ NC_004757.1 2400268 2401497 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 2400268..2401497 Nitrosomonas europaea ATCC 19718 1083178 NP_842216.1 CDS NE2214 NC_004757.1 2401504 2402397 D ATPase AAA 2401504..2402397 Nitrosomonas europaea ATCC 19718 1083179 NP_842217.1 CDS NE2215 NC_004757.1 2402399 2403334 D hypothetical protein 2402399..2403334 Nitrosomonas europaea ATCC 19718 1083180 NP_842218.1 CDS NE2216 NC_004757.1 2403363 2404556 R FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2403363..2404556) Nitrosomonas europaea ATCC 19718 1083181 NP_842219.1 CDS mpl NC_004757.1 2404725 2406089 D UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 2404725..2406089 Nitrosomonas europaea ATCC 19718 1083182 NP_842220.1 CDS NE2218 NC_004757.1 2406315 2407181 R hypothetical protein complement(2406315..2407181) Nitrosomonas europaea ATCC 19718 1083183 NP_842221.1 CDS aat NC_004757.1 2407544 2408254 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2407544..2408254 Nitrosomonas europaea ATCC 19718 1083184 NP_842222.2 CDS NE2220 NC_004757.1 2408212 2408967 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2408212..2408967 Nitrosomonas europaea ATCC 19718 1083185 NP_842223.1 CDS pyrD NC_004757.1 2408970 2409998 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2408970..2409998 Nitrosomonas europaea ATCC 19718 1083186 NP_842224.1 CDS NE2222 NC_004757.1 2409988 2410644 D 3Fe-4S ferredoxin 2409988..2410644 Nitrosomonas europaea ATCC 19718 1083187 NP_842225.1 CDS nth NC_004757.1 2410645 2411316 D HhH-GPD:Iron-sulfur cluster loop (FCL) 2410645..2411316 Nitrosomonas europaea ATCC 19718 1083188 NP_842226.1 CDS NE2224 NC_004757.1 2411313 2411708 D hypothetical protein 2411313..2411708 Nitrosomonas europaea ATCC 19718 1083189 NP_842227.1 CDS NE2225 NC_004757.1 2411698 2412135 D hypothetical protein 2411698..2412135 Nitrosomonas europaea ATCC 19718 1083190 NP_842228.1 CDS NE2226 NC_004757.1 2412161 2413066 R SLT domain-containing protein complement(2412161..2413066) Nitrosomonas europaea ATCC 19718 1083191 NP_842229.1 CDS NE2227 NC_004757.1 2413308 2414870 R hypothetical protein complement(2413308..2414870) Nitrosomonas europaea ATCC 19718 1083192 NP_842230.1 CDS NE2228 NC_004757.1 2415225 2416268 R integrase catalytic subunit complement(2415225..2416268) Nitrosomonas europaea ATCC 19718 1083193 NP_842231.1 CDS NE2229 NC_004757.1 2416689 2417594 D similar to (AF324335) long-chain N-acyl amino acid synthase [uncultured proteobacterium SFB/CJ-2001], evalue=6.00e-55, 48% identity; long-chain N-acyl amino acid synthase 2416689..2417594 Nitrosomonas europaea ATCC 19718 1083194 NP_842232.1 CDS NE2230 NC_004757.1 2417795 2418211 D hypothetical protein 2417795..2418211 Nitrosomonas europaea ATCC 19718 1083195 NP_842233.1 CDS NE2231 NC_004757.1 2418225 2418638 D hypothetical protein 2418225..2418638 Nitrosomonas europaea ATCC 19718 1083196 NP_842234.1 CDS NE2232 NC_004757.1 2418813 2419856 R integrase catalytic subunit complement(2418813..2419856) Nitrosomonas europaea ATCC 19718 1083197 NP_842235.1 CDS NE2233 NC_004757.1 2420648 2421631 D Fatty acid desaturase, type 2 2420648..2421631 Nitrosomonas europaea ATCC 19718 1083198 NP_842236.1 CDS hetM NC_004757.1 2421663 2422778 R polyketide synthase complement(2421663..2422778) Nitrosomonas europaea ATCC 19718 1083199 NP_842237.1 CDS NE2235 NC_004757.1 2422775 2424622 R AMP-dependent synthetase and ligase complement(2422775..2424622) Nitrosomonas europaea ATCC 19718 1083200 NP_842238.1 CDS NE2236 NC_004757.1 2424692 2425762 R hypothetical protein complement(2424692..2425762) Nitrosomonas europaea ATCC 19718 1083201 NP_842239.1 CDS NE2237 NC_004757.1 2425795 2427483 R FAD linked oxidase domain-containing protein complement(2425795..2427483) Nitrosomonas europaea ATCC 19718 1083202 NP_842240.1 CDS NE2238 NC_004757.1 2427598 2428041 R transposase IS200 complement(2427598..2428041) Nitrosomonas europaea ATCC 19718 1083203 NP_842241.1 CDS NE2239 NC_004757.1 2428310 2429119 R hypothetical protein complement(2428310..2429119) Nitrosomonas europaea ATCC 19718 1083204 NP_842242.1 CDS NE2240 NC_004757.1 2429390 2430637 D hypothetical protein 2429390..2430637 Nitrosomonas europaea ATCC 19718 1083205 NP_842243.1 CDS NE2241 NC_004757.1 2430887 2431504 D hypothetical protein 2430887..2431504 Nitrosomonas europaea ATCC 19718 1083206 NP_842244.1 CDS NE2242 NC_004757.1 2431573 2432784 D hypothetical protein 2431573..2432784 Nitrosomonas europaea ATCC 19718 1083207 NP_842245.1 CDS NE2243 NC_004757.1 2432821 2434251 R hypothetical protein complement(2432821..2434251) Nitrosomonas europaea ATCC 19718 1083208 NP_842246.1 CDS NE2244 NC_004757.1 2434332 2435027 R ABC transporter ATPase complement(2434332..2435027) Nitrosomonas europaea ATCC 19718 1083209 NP_842247.1 CDS NE2245 NC_004757.1 2435095 2435868 D hypothetical protein 2435095..2435868 Nitrosomonas europaea ATCC 19718 1083211 NP_842248.1 CDS NE2246 NC_004757.1 2436017 2436742 D hypothetical protein 2436017..2436742 Nitrosomonas europaea ATCC 19718 1083212 NP_842249.1 CDS NE2247 NC_004757.1 2436978 2438477 D hypothetical protein 2436978..2438477 Nitrosomonas europaea ATCC 19718 1083213 NP_842250.1 CDS NE2248 NC_004757.1 2438587 2439072 R nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein complement(2438587..2439072) Nitrosomonas europaea ATCC 19718 1083214 NP_842251.1 CDS wbpI NC_004757.1 2439311 2440420 D UDP-N-acetylglucosamine 2-epimerase 2439311..2440420 Nitrosomonas europaea ATCC 19718 1083215 NP_842252.1 CDS NE2250 NC_004757.1 2440428 2441936 D mannose-1-phosphate guanylyltransferase 2440428..2441936 Nitrosomonas europaea ATCC 19718 1083216 NP_842253.1 CDS NE2251 NC_004757.1 2442042 2442380 D Type I antifreeze protein 2442042..2442380 Nitrosomonas europaea ATCC 19718 1083217 NP_842254.1 CDS aspS NC_004757.1 2442464 2444245 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2442464..2444245 Nitrosomonas europaea ATCC 19718 1083218 NP_842255.1 CDS ntpA NC_004757.1 2444258 2444716 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 2444258..2444716 Nitrosomonas europaea ATCC 19718 1083219 NP_842256.1 CDS gmk NC_004757.1 2445013 2445618 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 2445013..2445618 Nitrosomonas europaea ATCC 19718 1083221 NP_842257.1 CDS rpoZ NC_004757.1 2445664 2445867 D Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2445664..2445867 Nitrosomonas europaea ATCC 19718 1083222 NP_842258.1 CDS NE2256 NC_004757.1 2446050 2446463 R N-acetyltransferase GCN5 complement(2446050..2446463) Nitrosomonas europaea ATCC 19718 1083223 NP_842259.1 CDS NE2257 NC_004757.1 2446486 2447139 R SAM-binding motif-containing protein complement(2446486..2447139) Nitrosomonas europaea ATCC 19718 1083224 NP_842260.1 CDS NE2258 NC_004757.1 2447196 2447585 R hypothetical protein complement(2447196..2447585) Nitrosomonas europaea ATCC 19718 1083225 NP_842261.1 CDS NE2259 NC_004757.1 2447626 2448330 R ThiJ/PfpI family protein complement(2447626..2448330) Nitrosomonas europaea ATCC 19718 1083226 NP_842262.1 CDS hslV NC_004757.1 2448814 2449335 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 2448814..2449335 Nitrosomonas europaea ATCC 19718 1083227 NP_842263.1 CDS hslU NC_004757.1 2449369 2450700 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 2449369..2450700 Nitrosomonas europaea ATCC 19718 1083228 NP_842264.1 CDS bktB NC_004757.1 2450711 2451889 D catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 2450711..2451889 Nitrosomonas europaea ATCC 19718 1083229 NP_842265.1 CDS pgi NC_004757.1 2451919 2453553 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 2451919..2453553 Nitrosomonas europaea ATCC 19718 1083230 NP_842266.1 CDS glgA1 NC_004757.1 2453578 2455065 D group 1 glycosyl transferase 2453578..2455065 Nitrosomonas europaea ATCC 19718 1083231 NP_842267.1 CDS NE2265 NC_004757.1 2455277 2456044 D hypothetical protein 2455277..2456044 Nitrosomonas europaea ATCC 19718 1083232 NP_842268.1 CDS NE2266 NC_004757.1 2456125 2457267 R group 1 glycosyl transferase complement(2456125..2457267) Nitrosomonas europaea ATCC 19718 1083233 NP_842269.1 CDS NE2267 NC_004757.1 2457269 2458423 R group 1 glycosyl transferase complement(2457269..2458423) Nitrosomonas europaea ATCC 19718 1083234 NP_842270.1 CDS NE2268 NC_004757.1 2458390 2459382 R hypothetical protein complement(2458390..2459382) Nitrosomonas europaea ATCC 19718 1083235 NP_842271.1 CDS NE2269 NC_004757.1 2459440 2460540 R group 1 glycosyl transferase complement(2459440..2460540) Nitrosomonas europaea ATCC 19718 1083236 NP_842272.1 CDS NE2270 NC_004757.1 2460540 2461574 R hypothetical protein complement(2460540..2461574) Nitrosomonas europaea ATCC 19718 1083237 NP_842273.1 CDS pgsA NC_004757.1 2461634 2462779 R poly-gamma-glutamate synthesis protein [UI:99417512] complement(2461634..2462779) Nitrosomonas europaea ATCC 19718 1083238 NP_842274.1 CDS NE2273 NC_004757.1 2463295 2463663 D transposase 2463295..2463663 Nitrosomonas europaea ATCC 19718 1083240 NP_842275.1 CDS NE2274 NC_004757.1 2463468 2464043 D IS4 family transposase 2463468..2464043 Nitrosomonas europaea ATCC 19718 1083241 NP_842276.1 CDS tviB NC_004757.1 2464956 2466230 R UDP-glucose/GDP-mannose dehydrogenase family protein complement(2464956..2466230) Nitrosomonas europaea ATCC 19718 1083243 NP_842277.1 CDS NE2277 NC_004757.1 2466239 2467246 R NAD-dependent epimerase/dehydratase family protein complement(2466239..2467246) Nitrosomonas europaea ATCC 19718 1083244 NP_842278.1 CDS epsP NC_004757.1 2467684 2468073 D low molecular weight phosphotyrosine protein phosphatase 2467684..2468073 Nitrosomonas europaea ATCC 19718 1083245 NP_842279.1 CDS yccZ NC_004757.1 2468173 2469390 D polysaccharide export protein 2468173..2469390 Nitrosomonas europaea ATCC 19718 1083246 NP_842280.1 CDS epsB NC_004757.1 2469537 2471792 D chain length determinant protein 2469537..2471792 Nitrosomonas europaea ATCC 19718 1083247 NP_842281.1 CDS rfe NC_004757.1 2471789 2473411 D glycosyl transferase family protein 2471789..2473411 Nitrosomonas europaea ATCC 19718 1083248 NP_842282.1 CDS NE2282 NC_004757.1 2473430 2473666 R hypothetical protein complement(2473430..2473666) Nitrosomonas europaea ATCC 19718 1083249 NP_842283.1 CDS NE2283 NC_004757.1 2473700 2474833 R hypothetical protein complement(2473700..2474833) Nitrosomonas europaea ATCC 19718 1083250 NP_842284.1 CDS NE2284 NC_004757.1 2474902 2478429 R chromosome segregation ATPase complement(2474902..2478429) Nitrosomonas europaea ATCC 19718 1083251 NP_842285.1 CDS NE2285 NC_004757.1 2478517 2478936 D NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2478517..2478936 Nitrosomonas europaea ATCC 19718 1083252 NP_842286.1 CDS fumC NC_004757.1 2478982 2480370 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2478982..2480370 Nitrosomonas europaea ATCC 19718 1083253 NP_842287.1 CDS NE2290 NC_004757.1 2483323 2485710 R type II secretion system protein E complement(2483323..2485710) Nitrosomonas europaea ATCC 19718 1083257 NP_842288.1 CDS NE2291 NC_004757.1 2485723 2486487 R cAMP phosphodiesterase complement(2485723..2486487) Nitrosomonas europaea ATCC 19718 1083258 NP_842289.1 CDS yxiE NC_004757.1 2486574 2486999 R universal stress protein complement(2486574..2486999) Nitrosomonas europaea ATCC 19718 1083259 NP_842290.1 CDS NE2293 NC_004757.1 2487096 2487815 R hypothetical protein complement(2487096..2487815) Nitrosomonas europaea ATCC 19718 1083260 NP_842291.1 CDS NE2294 NC_004757.1 2487821 2488975 R patatin complement(2487821..2488975) Nitrosomonas europaea ATCC 19718 1083261 NP_842292.1 CDS NE2295 NC_004757.1 2489265 2490272 D prolyl aminopeptidase 2489265..2490272 Nitrosomonas europaea ATCC 19718 1083262 NP_842293.1 CDS bioD NC_004757.1 2490310 2490996 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(2490310..2490996) Nitrosomonas europaea ATCC 19718 1083263 NP_842294.1 CDS bioC NC_004757.1 2490996 2491892 R SAM-binding motif-containing protein complement(2490996..2491892) Nitrosomonas europaea ATCC 19718 1083264 NP_842295.1 CDS bioH NC_004757.1 2491882 2492661 R biotin biosynthesis protein BioH complement(2491882..2492661) Nitrosomonas europaea ATCC 19718 1083265 NP_842296.1 CDS bioF NC_004757.1 2492642 2493805 R class-I aminotransferase complement(2492642..2493805) Nitrosomonas europaea ATCC 19718 1083266 NP_842297.1 CDS bioB NC_004757.1 2493826 2494845 R biotin synthase complement(2493826..2494845) Nitrosomonas europaea ATCC 19718 1083267 NP_842298.1 CDS NE2301 NC_004757.1 2494910 2495686 D hypothetical protein 2494910..2495686 Nitrosomonas europaea ATCC 19718 1083268 NP_842299.1 CDS NE2302 NC_004757.1 2495699 2496163 D rRNA methyltransferase 2495699..2496163 Nitrosomonas europaea ATCC 19718 1083269 NP_842300.1 CDS NE2303 NC_004757.1 2496410 2497939 D NAD(FAD)-dependent dehydrogenase 2496410..2497939 Nitrosomonas europaea ATCC 19718 1083270 NP_842301.1 CDS NE2304 NC_004757.1 2498019 2498651 D isochorismatase hydrolase family protein 2498019..2498651 Nitrosomonas europaea ATCC 19718 1083271 NP_842302.1 CDS NE2305 NC_004757.1 2498687 2499235 D hypothetical protein 2498687..2499235 Nitrosomonas europaea ATCC 19718 1083272 NP_842303.1 CDS NE2306 NC_004757.1 2499322 2502060 R hypothetical protein complement(2499322..2502060) Nitrosomonas europaea ATCC 19718 1083273 NP_842304.1 CDS rhuM NC_004757.1 2502057 2503103 R hypothetical protein complement(2502057..2503103) Nitrosomonas europaea ATCC 19718 1083274 NP_842305.1 CDS NE2308 NC_004757.1 2503100 2504140 R hypothetical protein complement(2503100..2504140) Nitrosomonas europaea ATCC 19718 1083275 NP_842306.1 CDS NE2309 NC_004757.1 2504137 2505840 R adenine specific DNA methylase Mod complement(2504137..2505840) Nitrosomonas europaea ATCC 19718 1083276 NP_842307.1 CDS NE2310 NC_004757.1 2505842 2508925 R ABC transporter complement(2505842..2508925) Nitrosomonas europaea ATCC 19718 1083277 NP_842308.1 CDS NE2311 NC_004757.1 2508925 2511822 R Snf2/Rad54 family helicase complement(2508925..2511822) Nitrosomonas europaea ATCC 19718 1083278 NP_842309.1 CDS pilQ NC_004757.1 2511923 2514079 R pilQ; fimbrial type-4 assembly signal peptide protein complement(2511923..2514079) Nitrosomonas europaea ATCC 19718 1083279 NP_842310.1 CDS pilP NC_004757.1 2514076 2514606 R type 4 fimbrial biogenesis protein PilP complement(2514076..2514606) Nitrosomonas europaea ATCC 19718 1083280 NP_842311.1 CDS pilO NC_004757.1 2514603 2515253 R similar to (NC_003295) PROBABLE FIMBRIAL TYPE-4 ASSEMBLY MEMBRANE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] evalue=4.00e-37, 39% identity; fimbrial type-4 assembly membrane transmembrane protein complement(2514603..2515253) Nitrosomonas europaea ATCC 19718 1083281 NP_842312.1 CDS pilN NC_004757.1 2515250 2515861 R type 4 fimbrial biogenesis protein PilN complement(2515250..2515861) Nitrosomonas europaea ATCC 19718 1083282 NP_842313.1 CDS pilM NC_004757.1 2515858 2516991 R type 4 fimbrial biogenesis protein PilM complement(2515858..2516991) Nitrosomonas europaea ATCC 19718 1083283 NP_842314.1 CDS mrcA NC_004757.1 2517172 2519484 D penicillin-binding 1 (peptidoglycan synthetase) transmembrane protein 2517172..2519484 Nitrosomonas europaea ATCC 19718 1083284 NP_842315.1 CDS NE2318 NC_004757.1 2519624 2520034 R hypothetical protein complement(2519624..2520034) Nitrosomonas europaea ATCC 19718 1083285 NP_842316.1 CDS lpdA3 NC_004757.1 2520078 2521550 R E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(2520078..2521550) Nitrosomonas europaea ATCC 19718 1083286 NP_842317.1 CDS NE2320 NC_004757.1 2521592 2522638 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(2521592..2522638) Nitrosomonas europaea ATCC 19718 1083287 NP_842318.1 CDS acpS NC_004757.1 2522641 2523018 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(2522641..2523018) Nitrosomonas europaea ATCC 19718 1083288 NP_842319.1 CDS pdxJ NC_004757.1 2523015 2523740 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(2523015..2523740) Nitrosomonas europaea ATCC 19718 1083289 NP_842320.1 CDS era NC_004757.1 2523795 2524685 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(2523795..2524685) Nitrosomonas europaea ATCC 19718 1083290 NP_842321.1 CDS rnc NC_004757.1 2524771 2525508 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(2524771..2525508) Nitrosomonas europaea ATCC 19718 1083291 NP_842322.1 CDS NE2325 NC_004757.1 2525505 2525885 R transmembrane protein complement(2525505..2525885) Nitrosomonas europaea ATCC 19718 1083292 NP_842323.1 CDS lepB NC_004757.1 2525920 2526723 R leader peptidase complement(2525920..2526723) Nitrosomonas europaea ATCC 19718 1083293 NP_842324.1 CDS lepA NC_004757.1 2526792 2528588 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(2526792..2528588) Nitrosomonas europaea ATCC 19718 1083294 NP_842325.1 CDS NE2328 NC_004757.1 2528874 2529131 R thioredoxin complement(2528874..2529131) Nitrosomonas europaea ATCC 19718 1083295 NP_842326.1 CDS mucD NC_004757.1 2529149 2530639 R serine protease MucD complement(2529149..2530639) Nitrosomonas europaea ATCC 19718 1083296 NP_842327.1 CDS NE2330 NC_004757.1 2530694 2531299 R hypothetical protein complement(2530694..2531299) Nitrosomonas europaea ATCC 19718 1083297 NP_842328.1 CDS rpoE1 NC_004757.1 2531293 2531895 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(2531293..2531895) Nitrosomonas europaea ATCC 19718 1083298 NP_842329.1 CDS NE2332 NC_004757.1 2532126 2532989 R hypothetical protein complement(2532126..2532989) Nitrosomonas europaea ATCC 19718 1083299 NP_842330.1 CDS NE2333 NC_004757.1 2533046 2533540 R hypothetical protein complement(2533046..2533540) Nitrosomonas europaea ATCC 19718 1083300 NP_842331.1 CDS NE2334 NC_004757.1 2533500 2534510 R PhoH-like protein complement(2533500..2534510) Nitrosomonas europaea ATCC 19718 1083301 NP_842332.1 CDS NE2335 NC_004757.1 2534571 2535902 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(2534571..2535902) Nitrosomonas europaea ATCC 19718 1083302 NP_842333.1 CDS cycX1 NC_004757.1 2536078 2536779 R tetraheme c-cytochrome complement(2536078..2536779) Nitrosomonas europaea ATCC 19718 1083303 NP_842334.1 CDS cycA1 NC_004757.1 2536782 2537489 R similar to Cytochrome c-554 precursor (C554) (Hydroxylamine oxidoreductase-linked cytochrome) pir||A59036 cytochrome c554, tetraheme, precursor - Nitrosomonas europaea; cytochrome c-554 complement(2536782..2537489) Nitrosomonas europaea ATCC 19718 1083304 NP_842335.1 CDS NE2338 NC_004757.1 2537545 2538654 R hypothetical protein complement(2537545..2538654) Nitrosomonas europaea ATCC 19718 1083305 NP_842336.1 CDS hao3 NC_004757.1 2538651 2540363 R similar to (AB030386) hydroxylamine oxidoreductase [Nitrosomonas sp. ENI-11], evalue=0.00e+00, 100% identity; hydroxylamine oxidoreductase complement(2538651..2540363) Nitrosomonas europaea ATCC 19718 1083306 NP_842337.1 CDS rpsT NC_004757.1 2540394 2540657 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(2540394..2540657) Nitrosomonas europaea ATCC 19718 1083307 NP_842338.1 CDS NE2341 NC_004757.1 2540943 2542910 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2540943..2542910 Nitrosomonas europaea ATCC 19718 1083308 NP_842339.1 CDS NE2342 NC_004757.1 2542907 2543908 D metallo-beta-lactamase superfamily protein 2542907..2543908 Nitrosomonas europaea ATCC 19718 1083309 NP_842340.1 CDS NE2343 NC_004757.1 2544017 2545312 R hypothetical protein complement(2544017..2545312) Nitrosomonas europaea ATCC 19718 1083310 NP_842341.1 CDS NE2344 NC_004757.1 2545343 2546461 R unsaturated glucuronyl hydrolase complement(2545343..2546461) Nitrosomonas europaea ATCC 19718 1083311 NP_842342.1 CDS NE2345 NC_004757.1 2546469 2548019 R hypothetical protein complement(2546469..2548019) Nitrosomonas europaea ATCC 19718 1083312 NP_842343.1 CDS NE2346 NC_004757.1 2548076 2548867 D hydrolase 2548076..2548867 Nitrosomonas europaea ATCC 19718 1083313 NP_842344.1 CDS NE2347 NC_004757.1 2548891 2550093 R general substrate transporters complement(2548891..2550093) Nitrosomonas europaea ATCC 19718 1083314 NP_842345.1 CDS fadE1 NC_004757.1 2550138 2551337 R Acyl-CoA dehydrogenase complement(2550138..2551337) Nitrosomonas europaea ATCC 19718 1083315 NP_842346.1 CDS ydiD NC_004757.1 2551337 2553019 R AMP-dependent synthetase and ligase complement(2551337..2553019) Nitrosomonas europaea ATCC 19718 1083316 NP_842347.1 CDS NE2350 NC_004757.1 2553016 2554902 R L-carnitine dehydratase complement(2553016..2554902) Nitrosomonas europaea ATCC 19718 1083317 NP_842348.1 CDS NE2351 NC_004757.1 2554940 2555212 R hypothetical protein complement(2554940..2555212) Nitrosomonas europaea ATCC 19718 1083318 NP_842349.1 CDS NE2352 NC_004757.1 2555419 2555865 R Mov34 family protein complement(2555419..2555865) Nitrosomonas europaea ATCC 19718 1083319 NP_842350.1 CDS moeZ NC_004757.1 2555967 2557139 R molybdopterin/thiamine biosynthesis family protein complement(2555967..2557139) Nitrosomonas europaea ATCC 19718 1083320 NP_842351.1 CDS NE2354 NC_004757.1 2557540 2558205 R hypothetical protein complement(2557540..2558205) Nitrosomonas europaea ATCC 19718 1083321 NP_842352.1 CDS lysS NC_004757.1 2558314 2559822 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(2558314..2559822) Nitrosomonas europaea ATCC 19718 1083322 NP_842353.1 CDS glnS NC_004757.1 2560102 2561772 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2560102..2561772 Nitrosomonas europaea ATCC 19718 1083323 NP_842354.1 CDS NE2357 NC_004757.1 2561933 2562457 D NLP/P60 2561933..2562457 Nitrosomonas europaea ATCC 19718 1083324 NP_842355.1 CDS NE2358 NC_004757.1 2562498 2563325 R hypothetical protein complement(2562498..2563325) Nitrosomonas europaea ATCC 19718 1083325 NP_842356.1 CDS ppsA NC_004757.1 2563325 2565700 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2563325..2565700) Nitrosomonas europaea ATCC 19718 1083326 NP_842357.1 CDS NE2360 NC_004757.1 2565800 2566183 R hypothetical protein complement(2565800..2566183) Nitrosomonas europaea ATCC 19718 1083327 NP_842358.1 CDS glnS NC_004757.1 2567612 2569282 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2567612..2569282 Nitrosomonas europaea ATCC 19718 1083330 NP_842359.1 CDS NE2364 NC_004757.1 2569443 2569967 D NLP/P60 2569443..2569967 Nitrosomonas europaea ATCC 19718 1083331 NP_842360.1 CDS NE2365 NC_004757.1 2570008 2570835 R hypothetical protein complement(2570008..2570835) Nitrosomonas europaea ATCC 19718 1083332 NP_842361.1 CDS ppsA NC_004757.1 2570835 2573210 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2570835..2573210) Nitrosomonas europaea ATCC 19718 1083333 NP_842362.1 CDS NE2367 NC_004757.1 2573310 2573693 R hypothetical protein complement(2573310..2573693) Nitrosomonas europaea ATCC 19718 1083334 NP_842363.1 CDS NE2368 NC_004757.1 2573829 2575055 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2573829..2575055 Nitrosomonas europaea ATCC 19718 1083335 NP_842364.1 CDS NE2369 NC_004757.1 2575163 2576479 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2575163..2576479 Nitrosomonas europaea ATCC 19718 1083336 NP_842365.2 CDS thrC NC_004757.1 2576601 2578034 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2576601..2578034 Nitrosomonas europaea ATCC 19718 1083337 NP_842366.1 CDS sdhB NC_004757.1 2578160 2578855 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2578160..2578855 Nitrosomonas europaea ATCC 19718 1083338 NP_842367.1 CDS NE2372 NC_004757.1 2578852 2579085 D hypothetical protein 2578852..2579085 Nitrosomonas europaea ATCC 19718 1083339 NP_842368.1 CDS gltA NC_004757.1 2579143 2580426 D citrate synthase 2579143..2580426 Nitrosomonas europaea ATCC 19718 1083340 NP_842369.1 CDS sucA NC_004757.1 2580587 2583445 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 2580587..2583445 Nitrosomonas europaea ATCC 19718 1083341 NP_842370.1 CDS sucB NC_004757.1 2583467 2584744 D sucB; dihydrolipoamide succinyltransferase (component of 2-oxoglutarate dehydrogenase complex) protein 2583467..2584744 Nitrosomonas europaea ATCC 19718 1083342 NP_842371.1 CDS NE2376 NC_004757.1 2584919 2585761 R hypothetical protein complement(2584919..2585761) Nitrosomonas europaea ATCC 19718 1083343 NP_842372.1 CDS NE2377 NC_004757.1 2586274 2586525 R BolA-like protein complement(2586274..2586525) Nitrosomonas europaea ATCC 19718 1083344 NP_842373.1 CDS NE2378 NC_004757.1 2586565 2587320 R ABC 2 transport system integral membrane protein complement(2586565..2587320) Nitrosomonas europaea ATCC 19718 1083345 NP_842374.1 CDS NE2379 NC_004757.1 2587317 2588231 R multidrug ABC transporter ATPase complement(2587317..2588231) Nitrosomonas europaea ATCC 19718 1083346 NP_842375.1 CDS NE2380 NC_004757.1 2588296 2588637 R STAS domain-containing protein complement(2588296..2588637) Nitrosomonas europaea ATCC 19718 1083347 NP_842376.1 CDS NE2381 NC_004757.1 2588615 2589232 R signal peptide protein complement(2588615..2589232) Nitrosomonas europaea ATCC 19718 1083348 NP_842377.1 CDS NE2382 NC_004757.1 2589248 2589727 R mce related protein complement(2589248..2589727) Nitrosomonas europaea ATCC 19718 1083349 NP_842378.1 CDS NE2383 NC_004757.1 2589727 2590542 R hypothetical protein complement(2589727..2590542) Nitrosomonas europaea ATCC 19718 1083350 NP_842379.1 CDS NE2384 NC_004757.1 2590562 2591374 R ABC transporter ATPase complement(2590562..2591374) Nitrosomonas europaea ATCC 19718 1083351 NP_842380.1 CDS NE2385 NC_004757.1 2591501 2592376 D hypothetical protein 2591501..2592376 Nitrosomonas europaea ATCC 19718 1083352 NP_842381.1 CDS NE2386 NC_004757.1 2592392 2593078 R SH3 domain-containing protein complement(2592392..2593078) Nitrosomonas europaea ATCC 19718 1083353 NP_842382.1 CDS NE2387 NC_004757.1 2593171 2593365 R hypothetical protein complement(2593171..2593365) Nitrosomonas europaea ATCC 19718 1083354 NP_842383.1 CDS cutA NC_004757.1 2593479 2593817 D CutA1 divalent ion tolerance protein 2593479..2593817 Nitrosomonas europaea ATCC 19718 1083355 NP_842384.1 CDS dsbD NC_004757.1 2593830 2595770 D thioredoxin:cytochrome c biogenesis protein transmembrane region 2593830..2595770 Nitrosomonas europaea ATCC 19718 1083356 NP_842385.1 CDS NE2390 NC_004757.1 2595881 2596429 D thioredoxin 2595881..2596429 Nitrosomonas europaea ATCC 19718 1083357 NP_842386.1 CDS NE2391 NC_004757.1 2596642 2597892 R ApbE family lipoprotein complement(2596642..2597892) Nitrosomonas europaea ATCC 19718 1083358 NP_842387.1 CDS nqrF NC_004757.1 2597901 2599121 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F complement(2597901..2599121) Nitrosomonas europaea ATCC 19718 1083359 NP_842388.1 CDS nqrE NC_004757.1 2599284 2599892 R Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E complement(2599284..2599892) Nitrosomonas europaea ATCC 19718 1083360 NP_842389.1 CDS nqrD NC_004757.1 2599889 2600560 R Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D complement(2599889..2600560) Nitrosomonas europaea ATCC 19718 1083361 NP_842390.1 CDS nqrC NC_004757.1 2600561 2601355 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C complement(2600561..2601355) Nitrosomonas europaea ATCC 19718 1083362 NP_842391.1 CDS nqrB NC_004757.1 2601348 2602544 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B complement(2601348..2602544) Nitrosomonas europaea ATCC 19718 1083363 NP_842392.1 CDS nqrA NC_004757.1 2602552 2603910 R uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A complement(2602552..2603910) Nitrosomonas europaea ATCC 19718 1083364 NP_842393.1 CDS NE2398 NC_004757.1 2604418 2604858 R hypothetical protein complement(2604418..2604858) Nitrosomonas europaea ATCC 19718 1083365 NP_842394.1 CDS NE2399 NC_004757.1 2605057 2606256 R DnaJ N-terminal domain-containing protein complement(2605057..2606256) Nitrosomonas europaea ATCC 19718 1083366 NP_842395.1 CDS PatB NC_004757.1 2606353 2607534 R class-I aminotransferase complement(2606353..2607534) Nitrosomonas europaea ATCC 19718 1083367 NP_842396.1 CDS NE2401 NC_004757.1 2607531 2609648 R Generic methyltransferase complement(2607531..2609648) Nitrosomonas europaea ATCC 19718 1083368 NP_842397.1 CDS clpB NC_004757.1 2609855 2612446 D ClpB ATPase dependent protease, chaperonin 2609855..2612446 Nitrosomonas europaea ATCC 19718 1083369 NP_842398.1 CDS dapA NC_004757.1 2612535 2613413 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2612535..2613413 Nitrosomonas europaea ATCC 19718 1083370 NP_842399.1 CDS NE2404 NC_004757.1 2613423 2614580 D transmembrane protein 2613423..2614580 Nitrosomonas europaea ATCC 19718 1083371 NP_842400.1 CDS mviN NC_004757.1 2615166 2616695 R virulence factor MVIN-like complement(2615166..2616695) Nitrosomonas europaea ATCC 19718 1083372 NP_842401.1 CDS flhC NC_004757.1 2616969 2617541 R With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC complement(2616969..2617541) Nitrosomonas europaea ATCC 19718 1083373 NP_842402.1 CDS flhD NC_004757.1 2617567 2617884 R with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD complement(2617567..2617884) Nitrosomonas europaea ATCC 19718 1083374 NP_842403.1 CDS NE2408 NC_004757.1 2618145 2620544 R DNA internalization-related competence protein ComEC/Rec2 complement(2618145..2620544) Nitrosomonas europaea ATCC 19718 1083375 NP_842404.1 CDS NE2409 NC_004757.1 2621108 2621311 R hypothetical protein complement(2621108..2621311) Nitrosomonas europaea ATCC 19718 1083376 NP_842405.1 CDS cstA NC_004757.1 2621327 2623399 R carbon starvation protein CstA complement(2621327..2623399) Nitrosomonas europaea ATCC 19718 1083377 NP_842406.1 CDS NE2411 NC_004757.1 2624480 2625472 D integrase catalytic subunit 2624480..2625472 Nitrosomonas europaea ATCC 19718 1083378 NP_842407.1 CDS NE2412 NC_004757.1 2625692 2626060 D transposase 2625692..2626060 Nitrosomonas europaea ATCC 19718 1083379 NP_842408.1 CDS NE2413 NC_004757.1 2625865 2626401 D IS4 family transposase 2625865..2626401 Nitrosomonas europaea ATCC 19718 1083380 NP_842409.1 CDS NE2414 NC_004757.1 2626458 2627501 R integrase catalytic subunit complement(2626458..2627501) Nitrosomonas europaea ATCC 19718 1083381 NP_842410.1 CDS NE2416 NC_004757.1 2628459 2630801 R biotin / lipoyl attachment protein complement(2628459..2630801) Nitrosomonas europaea ATCC 19718 1083383 NP_842411.1 CDS NE2417 NC_004757.1 2630853 2631512 R hypothetical protein complement(2630853..2631512) Nitrosomonas europaea ATCC 19718 1083384 NP_842412.1 CDS NE2418 NC_004757.1 2631509 2632237 R hypothetical protein complement(2631509..2632237) Nitrosomonas europaea ATCC 19718 1083385 NP_842413.1 CDS NE2419 NC_004757.1 2632315 2633832 R amino acid permease complement(2632315..2633832) Nitrosomonas europaea ATCC 19718 1083386 NP_842414.1 CDS NE2420 NC_004757.1 2634783 2638418 D carbamoyl-phosphate synthase 2634783..2638418 Nitrosomonas europaea ATCC 19718 1083387 NP_842415.1 CDS NE2421 NC_004757.1 2638406 2639791 R LysM domain-containing protein complement(2638406..2639791) Nitrosomonas europaea ATCC 19718 1083388 NP_842416.1 CDS nrdB NC_004757.1 2639941 2641089 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(2639941..2641089) Nitrosomonas europaea ATCC 19718 1083389 NP_842417.1 CDS nrdA NC_004757.1 2641130 2643997 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(2641130..2643997) Nitrosomonas europaea ATCC 19718 1083390 NP_842418.1 CDS NE2426 NC_004757.1 2647881 2648177 R hypothetical protein complement(2647881..2648177) Nitrosomonas europaea ATCC 19718 1083393 NP_842419.1 CDS NE2427 NC_004757.1 2648208 2648672 R similar to (D78321) pyrimidine dimer DNA glycosylase [Micrococcus luteus], evalue=2.00e-37, 52% identity; pyrimidine dimer DNA glycosylase complement(2648208..2648672) Nitrosomonas europaea ATCC 19718 1083394 NP_842420.1 CDS NE2428 NC_004757.1 2648682 2649344 R hypothetical protein complement(2648682..2649344) Nitrosomonas europaea ATCC 19718 1083395 NP_842421.1 CDS NE2429 NC_004757.1 2649963 2650370 R hypothetical protein complement(2649963..2650370) Nitrosomonas europaea ATCC 19718 1083396 NP_842422.1 CDS NE2430 NC_004757.1 2650880 2651056 R hypothetical protein complement(2650880..2651056) Nitrosomonas europaea ATCC 19718 1083397 NP_842423.1 CDS NE2431 NC_004757.1 2651288 2651668 R PilT domain-containing protein complement(2651288..2651668) Nitrosomonas europaea ATCC 19718 1083398 NP_842424.1 CDS NE2432 NC_004757.1 2652660 2653850 R hypothetical protein complement(2652660..2653850) Nitrosomonas europaea ATCC 19718 1083399 NP_842425.1 CDS NE2433 NC_004757.1 2653861 2656332 R TonB-dependent receptor protein complement(2653861..2656332) Nitrosomonas europaea ATCC 19718 1083400 NP_842426.1 CDS NE2434 NC_004757.1 2656460 2657476 R transmembrane sensor complement(2656460..2657476) Nitrosomonas europaea ATCC 19718 1083401 NP_842427.1 CDS fecI NC_004757.1 2657490 2658047 R fecI specialized sigma subunits of RNA polymerase complement(2657490..2658047) Nitrosomonas europaea ATCC 19718 1083402 NP_842428.1 CDS NE2436 NC_004757.1 2658578 2659252 R hypothetical protein complement(2658578..2659252) Nitrosomonas europaea ATCC 19718 1083403 NP_842429.1 CDS mdoG NC_004757.1 2659527 2661200 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2659527..2661200 Nitrosomonas europaea ATCC 19718 1083404 NP_842430.1 CDS mdoH NC_004757.1 2661193 2663796 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2661193..2663796 Nitrosomonas europaea ATCC 19718 1083405 NP_842431.1 CDS NE2439 NC_004757.1 2664487 2664831 D hypothetical protein 2664487..2664831 Nitrosomonas europaea ATCC 19718 1083406 NP_842432.1 CDS NE2440 NC_004757.1 2665307 2665621 D hypothetical protein 2665307..2665621 Nitrosomonas europaea ATCC 19718 1083407 NP_842433.1 CDS NE2441 NC_004757.1 2665658 2665999 D hypothetical protein 2665658..2665999 Nitrosomonas europaea ATCC 19718 1083408 NP_842434.1 CDS NE2442 NC_004757.1 2666243 2667286 R integrase catalytic subunit complement(2666243..2667286) Nitrosomonas europaea ATCC 19718 1083409 NP_842435.1 CDS NE2443 NC_004757.1 2667489 2667941 R hypothetical protein complement(2667489..2667941) Nitrosomonas europaea ATCC 19718 1083410 NP_842436.1 CDS NE2444 NC_004757.1 2668023 2668475 R hypothetical protein complement(2668023..2668475) Nitrosomonas europaea ATCC 19718 1083411 NP_842437.1 CDS NE2445 NC_004757.1 2669025 2670068 D integrase catalytic subunit 2669025..2670068 Nitrosomonas europaea ATCC 19718 1083412 NP_842438.1 CDS NE2446 NC_004757.1 2671639 2672214 R IS4 family transposase complement(2671639..2672214) Nitrosomonas europaea ATCC 19718 1083413 NP_842439.1 CDS NE2447 NC_004757.1 2672019 2672387 R transposase complement(2672019..2672387) Nitrosomonas europaea ATCC 19718 1083414 NP_842440.1 CDS NE2449 NC_004757.1 2672868 2673191 R hypothetical protein complement(2672868..2673191) Nitrosomonas europaea ATCC 19718 1083416 NP_842441.1 CDS NE2450 NC_004757.1 2673252 2674181 R Mrr restriction system protein complement(2673252..2674181) Nitrosomonas europaea ATCC 19718 1083417 NP_842442.1 CDS NE2451 NC_004757.1 2674754 2675143 D death on curing protein 2674754..2675143 Nitrosomonas europaea ATCC 19718 1083418 NP_842443.1 CDS abcT3 NC_004757.1 2675202 2677010 R ABC transporter ATP-binding protein/permease complement(2675202..2677010) Nitrosomonas europaea ATCC 19718 1083419 NP_842444.1 CDS ssb NC_004757.1 2677195 2677644 R single-strand binding protein family complement(2677195..2677644) Nitrosomonas europaea ATCC 19718 1083420 NP_842445.1 CDS NE2454 NC_004757.1 2677645 2679003 R major facilitator transporter complement(2677645..2679003) Nitrosomonas europaea ATCC 19718 1083421 NP_842446.1 CDS uvrA1 NC_004757.1 2679119 2681950 D ABC transporter 2679119..2681950 Nitrosomonas europaea ATCC 19718 1083422 NP_842447.1 CDS ttuD2 NC_004757.1 2681956 2683239 D hydroxypyruvate reductase oxidoreductase protein 2681956..2683239 Nitrosomonas europaea ATCC 19718 1083423 NP_842448.1 CDS NE2457 NC_004757.1 2683268 2684275 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(2683268..2684275) Nitrosomonas europaea ATCC 19718 1083424 NP_842449.1 CDS engB NC_004757.1 2684420 2685088 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(2684420..2685088) Nitrosomonas europaea ATCC 19718 1083425 NP_842450.1 CDS birA NC_004757.1 2685107 2685877 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(2685107..2685877) Nitrosomonas europaea ATCC 19718 1083426 NP_842451.1 CDS birA NC_004757.1 2685888 2686901 R birA ligase: biotin--acetyl-CoA-carboxylase ligase complement(2685888..2686901) Nitrosomonas europaea ATCC 19718 1083427 NP_842452.1 CDS NE2461 NC_004757.1 2687065 2687418 R hypothetical protein complement(2687065..2687418) Nitrosomonas europaea ATCC 19718 1083428 NP_842453.1 CDS dapD NC_004757.1 2687598 2688419 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(2687598..2688419) Nitrosomonas europaea ATCC 19718 1083429 NP_842454.1 CDS dapC NC_004757.1 2688444 2689646 R catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase complement(2688444..2689646) Nitrosomonas europaea ATCC 19718 1083430 NP_842455.1 CDS NE2464 NC_004757.1 2689747 2690628 D hypothetical protein 2689747..2690628 Nitrosomonas europaea ATCC 19718 1083431 NP_842456.1 CDS NE2465 NC_004757.1 2690756 2691319 D Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2690756..2691319 Nitrosomonas europaea ATCC 19718 1083432 NP_842457.1 CDS NE2466 NC_004757.1 2691464 2692003 D lipoprotein 2691464..2692003 Nitrosomonas europaea ATCC 19718 1083433 NP_842458.1 CDS NE2467 NC_004757.1 2692019 2692804 R Band 7 protein complement(2692019..2692804) Nitrosomonas europaea ATCC 19718 1083434 NP_842459.1 CDS NE2468 NC_004757.1 2692806 2694059 R hypothetical protein complement(2692806..2694059) Nitrosomonas europaea ATCC 19718 1083435 NP_842460.1 CDS NE2469 NC_004757.1 2694191 2695069 R IS4 family transposase complement(2694191..2695069) Nitrosomonas europaea ATCC 19718 1083436 NP_842461.1 CDS NE2470 NC_004757.1 2695248 2695850 R NUDIX hydrolase complement(2695248..2695850) Nitrosomonas europaea ATCC 19718 1083437 NP_842462.1 CDS NE2471 NC_004757.1 2696045 2696959 R hypothetical protein complement(2696045..2696959) Nitrosomonas europaea ATCC 19718 1083438 NP_842463.1 CDS NE2472 NC_004757.1 2697053 2697919 D hypothetical protein 2697053..2697919 Nitrosomonas europaea ATCC 19718 1083439 NP_842464.1 CDS spoOJ NC_004757.1 2698089 2698922 R ParB-like nuclease domain-containing protein complement(2698089..2698922) Nitrosomonas europaea ATCC 19718 1083440 NP_842465.1 CDS parA2 NC_004757.1 2698974 2699738 R ParA family ATPase complement(2698974..2699738) Nitrosomonas europaea ATCC 19718 1083441 NP_842466.1 CDS gidB NC_004757.1 2699804 2700448 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(2699804..2700448) Nitrosomonas europaea ATCC 19718 1083442 NP_842467.1 CDS gidA NC_004757.1 2700423 2702342 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(2700423..2702342) Nitrosomonas europaea ATCC 19718 1083443 NP_842468.1 CDS NE2477 NC_004757.1 2702595 2703056 R hypothetical protein complement(2702595..2703056) Nitrosomonas europaea ATCC 19718 1083444 NP_842469.1 CDS NE2478 NC_004757.1 2703064 2703387 R hypothetical protein complement(2703064..2703387) Nitrosomonas europaea ATCC 19718 1083445 NP_842470.1 CDS NE2479 NC_004757.1 2703635 2705155 D appC; oligopeptide ABC transporter 2703635..2705155 Nitrosomonas europaea ATCC 19718 1083446 NP_842471.1 CDS dppF NC_004757.1 2705152 2707233 D peptide ABC transporter ATPase 2705152..2707233 Nitrosomonas europaea ATCC 19718 1083447 NP_842472.1 CDS prfC NC_004757.1 2707230 2708837 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 2707230..2708837 Nitrosomonas europaea ATCC 19718 1083448 NP_842473.1 CDS NE2483 NC_004757.1 2710395 2711345 R integrase catalytic subunit complement(2710395..2711345) Nitrosomonas europaea ATCC 19718 1083450 NP_842474.1 CDS NE2485 NC_004757.1 2712764 2713816 R transmembrane sensor complement(2712764..2713816) Nitrosomonas europaea ATCC 19718 1083452 NP_842475.1 CDS NE2486 NC_004757.1 2713813 2714454 R ECF subfamily RNA polymerase sigma factor complement(2713813..2714454) Nitrosomonas europaea ATCC 19718 1083453 NP_842476.1 CDS flhB NC_004757.1 2714683 2715813 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 2714683..2715813 Nitrosomonas europaea ATCC 19718 1083454 NP_842477.1 CDS flhA NC_004757.1 2715861 2717945 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 2715861..2717945 Nitrosomonas europaea ATCC 19718 1083455 NP_842478.1 CDS flhF NC_004757.1 2717942 2719201 D positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 2717942..2719201 Nitrosomonas europaea ATCC 19718 1083456 NP_842479.1 CDS NE2490 NC_004757.1 2719188 2720081 D MinD-like protein 2719188..2720081 Nitrosomonas europaea ATCC 19718 1083457 NP_842480.1 CDS fliA NC_004757.1 2720090 2720800 D RNA polymerase sigma-70 factor family protein 2720090..2720800 Nitrosomonas europaea ATCC 19718 1083458 NP_842481.1 CDS NE2492 NC_004757.1 2720813 2721988 R general substrate transporters complement(2720813..2721988) Nitrosomonas europaea ATCC 19718 1083459 NP_842482.1 CDS NE2493 NC_004757.1 2722018 2722596 R hypothetical protein complement(2722018..2722596) Nitrosomonas europaea ATCC 19718 1083460 NP_842483.1 CDS NE2494 NC_004757.1 2723011 2724072 R hypothetical protein complement(2723011..2724072) Nitrosomonas europaea ATCC 19718 1083461 NP_842484.1 CDS NE2495 NC_004757.1 2724072 2725904 R ABC transporter complement(2724072..2725904) Nitrosomonas europaea ATCC 19718 1083462 NP_842485.1 CDS NE2496 NC_004757.1 2725901 2727544 R restriction modification system, type I complement(2725901..2727544) Nitrosomonas europaea ATCC 19718 1083463 NP_842486.1 CDS NE2497 NC_004757.1 2727541 2729202 R hsdM; type I restriction modification enzyme methylase subunit complement(2727541..2729202) Nitrosomonas europaea ATCC 19718 1083464 NP_842487.1 CDS NE2498 NC_004757.1 2729205 2730011 R hypothetical protein complement(2729205..2730011) Nitrosomonas europaea ATCC 19718 1083465 NP_842488.1 CDS hsdR NC_004757.1 2730057 2732858 R Blast hits say this is a Type 1 restriction modification system endonuclease R; DEAD/DEAH box helicase complement(2730057..2732858) Nitrosomonas europaea ATCC 19718 1083466 NP_842489.1 CDS NE2500 NC_004757.1 2733540 2733980 D hypothetical protein 2733540..2733980 Nitrosomonas europaea ATCC 19718 1083467 NP_842490.1 CDS NE2501 NC_004757.1 2733973 2735307 D L-sorbosone dehydrogenase 2733973..2735307 Nitrosomonas europaea ATCC 19718 1083468 NP_842491.1 CDS NE2502 NC_004757.1 2735317 2735571 D outer membrane receptor for iron transport 2735317..2735571 Nitrosomonas europaea ATCC 19718 1083469 NP_842492.1 CDS NE2503 NC_004757.1 2735608 2737443 D TonB-dependent receptor protein 2735608..2737443 Nitrosomonas europaea ATCC 19718 1083470 NP_842493.1 CDS NE2504 NC_004757.1 2737580 2738458 R IS4 family transposase complement(2737580..2738458) Nitrosomonas europaea ATCC 19718 1083471 NP_842494.1 CDS NE2505 NC_004757.1 2738984 2740108 D hypothetical protein 2738984..2740108 Nitrosomonas europaea ATCC 19718 1083472 NP_842495.1 CDS NE2506 NC_004757.1 2740129 2740404 D hypothetical protein 2740129..2740404 Nitrosomonas europaea ATCC 19718 1083473 NP_842496.1 CDS NE2507 NC_004757.1 2740829 2741791 R AraC family transcription regulator complement(2740829..2741791) Nitrosomonas europaea ATCC 19718 1083474 NP_842497.1 CDS NE2508 NC_004757.1 2741913 2742650 D hypothetical protein 2741913..2742650 Nitrosomonas europaea ATCC 19718 1083475 NP_842498.1 CDS NE2509 NC_004757.1 2742762 2743136 R hypothetical protein complement(2742762..2743136) Nitrosomonas europaea ATCC 19718 1083476 NP_842499.1 CDS NE2510 NC_004757.1 2743199 2744263 R NADH:flavin oxidoreductase complement(2743199..2744263) Nitrosomonas europaea ATCC 19718 1083477 NP_842500.1 CDS NE2511 NC_004757.1 2744407 2745420 R AraC family transcription regulator complement(2744407..2745420) Nitrosomonas europaea ATCC 19718 1083478 NP_842501.1 CDS NE2512 NC_004757.1 2745484 2745786 D hypothetical protein 2745484..2745786 Nitrosomonas europaea ATCC 19718 1083479 NP_842502.1 CDS NE2513 NC_004757.1 2746431 2747177 R hypothetical protein complement(2746431..2747177) Nitrosomonas europaea ATCC 19718 1083480 NP_842503.1 CDS NE2514 NC_004757.1 2747428 2748342 D hypothetical protein 2747428..2748342 Nitrosomonas europaea ATCC 19718 1083481 NP_842504.1 CDS NE2515 NC_004757.1 2748517 2749368 R integrase catalytic subunit complement(2748517..2749368) Nitrosomonas europaea ATCC 19718 1083482 NP_842505.1 CDS NE2516 NC_004757.1 2749422 2749745 R transposase IS911 complement(2749422..2749745) Nitrosomonas europaea ATCC 19718 1083483 NP_842506.1 CDS NE2517 NC_004757.1 2749717 2750460 R hypothetical protein complement(2749717..2750460) Nitrosomonas europaea ATCC 19718 1083484 NP_842507.1 CDS NE2518 NC_004757.1 2750475 2751422 R patatin complement(2750475..2751422) Nitrosomonas europaea ATCC 19718 1083485 NP_842508.1 CDS NE2519 NC_004757.1 2751702 2752607 D hypothetical protein 2751702..2752607 Nitrosomonas europaea ATCC 19718 1083486 NP_842509.1 CDS NE2520 NC_004757.1 2752609 2754687 D ATP-dependent DNA helicase RecQ 2752609..2754687 Nitrosomonas europaea ATCC 19718 1083487 NP_842510.1 CDS NE2521 NC_004757.1 2754684 2756093 D hypothetical protein 2754684..2756093 Nitrosomonas europaea ATCC 19718 1083488 NP_842511.1 CDS NE2522 NC_004757.1 2756159 2757505 D type I restriction-modification system methylation subunit 2756159..2757505 Nitrosomonas europaea ATCC 19718 1083489 NP_842512.1 CDS NE2523 NC_004757.1 2757463 2757693 D hypothetical protein 2757463..2757693 Nitrosomonas europaea ATCC 19718 1083490 NP_842513.1 CDS NE2524 NC_004757.1 2757998 2759512 D type I restriction-modification system methylation subunit 2757998..2759512 Nitrosomonas europaea ATCC 19718 1083491 NP_842514.1 CDS NE2525 NC_004757.1 2759505 2761391 D ATP-dependent DNA helicase RecG-like protein 2759505..2761391 Nitrosomonas europaea ATCC 19718 1083492 NP_842515.1 CDS NE2526 NC_004757.1 2761384 2762574 D restriction modification system, type I 2761384..2762574 Nitrosomonas europaea ATCC 19718 1083493 NP_842516.1 CDS NE2527 NC_004757.1 2762574 2765573 D restriction enzyme type I helicase subunits and related helicases 2762574..2765573 Nitrosomonas europaea ATCC 19718 1083494 NP_842517.1 CDS NE2528 NC_004757.1 2765586 2767808 D ATPase AAA 2765586..2767808 Nitrosomonas europaea ATCC 19718 1083495 NP_842518.1 CDS mcrC NC_004757.1 2767808 2768944 D McrC protein together with McrB forms the McrBC restriction system; recognizes N4- and C5-methylcytosine (and 5-hydroxy-methylcytosines); appears to act against 5-methylcytosine preceded by a purine residue; MrcC modulates the specificty of McrB and has DNA cleavage activity; 5-methylcytosine-specific restriction enzyme subunit McrC 2767808..2768944 Nitrosomonas europaea ATCC 19718 1083496 NP_842519.1 CDS NE2530 NC_004757.1 2768950 2769963 D hypothetical protein 2768950..2769963 Nitrosomonas europaea ATCC 19718 1083497 NP_842520.1 CDS NE2531 NC_004757.1 2769978 2770736 R similar to (NC_003295) PROBABLE SIGNAL PEPTIDE PROTEIN [Ralstonia solanacearum], evalue=4.00e-30, 48% identity; signal peptide complement(2769978..2770736) Nitrosomonas europaea ATCC 19718 1083498 NP_842521.1 CDS NE2532 NC_004757.1 2770889 2771740 R integrase catalytic subunit complement(2770889..2771740) Nitrosomonas europaea ATCC 19718 1083499 NP_842522.1 CDS NE2533 NC_004757.1 2771794 2772117 R transposase IS911 complement(2771794..2772117) Nitrosomonas europaea ATCC 19718 1083500 NP_842523.1 CDS NE2534 NC_004757.1 2774013 2774477 R glycoside hydrolase family protein complement(2774013..2774477) Nitrosomonas europaea ATCC 19718 1083501 NP_842524.1 CDS NE2535 NC_004757.1 2774474 2775652 R hypothetical protein complement(2774474..2775652) Nitrosomonas europaea ATCC 19718 1083502 NP_842525.1 CDS NE2536 NC_004757.1 2775828 2776778 D integrase catalytic subunit 2775828..2776778 Nitrosomonas europaea ATCC 19718 1083503 NP_842526.1 CDS sinR NC_004757.1 2776868 2777188 D helix-hairpin-helix DNA-binding motif-containing protein 2776868..2777188 Nitrosomonas europaea ATCC 19718 1083504 NP_842527.1 CDS NE2538 NC_004757.1 2777185 2778096 D hypothetical protein 2777185..2778096 Nitrosomonas europaea ATCC 19718 1083505 NP_842528.1 CDS NE2539 NC_004757.1 2778114 2779328 D hypothetical protein 2778114..2779328 Nitrosomonas europaea ATCC 19718 1083506 NP_842529.1 CDS NE2540 NC_004757.1 2779738 2780175 D bacteriophage-like protein 2779738..2780175 Nitrosomonas europaea ATCC 19718 1083507 NP_842530.1 CDS NE2541 NC_004757.1 2780172 2781527 D site-specific recombinase 2780172..2781527 Nitrosomonas europaea ATCC 19718 1083508 NP_842531.1 CDS NE2542 NC_004757.1 2781524 2781991 D LacI family regulatory protein 2781524..2781991 Nitrosomonas europaea ATCC 19718 1083509 NP_842532.1 CDS NE2543 NC_004757.1 2782013 2782864 R hypothetical protein complement(2782013..2782864) Nitrosomonas europaea ATCC 19718 1083510 NP_842533.1 CDS NE2544 NC_004757.1 2782876 2783544 R helix-hairpin-helix DNA-binding motif-containing protein complement(2782876..2783544) Nitrosomonas europaea ATCC 19718 1083511 NP_842534.1 CDS NE2545 NC_004757.1 2783564 2784367 R hypothetical protein complement(2783564..2784367) Nitrosomonas europaea ATCC 19718 1083512 NP_842535.1 CDS NE2546 NC_004757.1 2785209 2785856 R HAD family hydrolase complement(2785209..2785856) Nitrosomonas europaea ATCC 19718 1083514 NP_842536.1 CDS ubiG NC_004757.1 2785883 2786590 R Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase complement(2785883..2786590) Nitrosomonas europaea ATCC 19718 1083515 NP_842537.1 CDS NE2548 NC_004757.1 2786767 2787462 R outer membrane protein complement(2786767..2787462) Nitrosomonas europaea ATCC 19718 1083516 NP_842538.1 CDS NE2549 NC_004757.1 2787819 2788589 D multidrug ABC transporter ATPase 2787819..2788589 Nitrosomonas europaea ATCC 19718 1083517 NP_842539.1 CDS NE2550 NC_004757.1 2788586 2789332 D ABC transporter permease 2788586..2789332 Nitrosomonas europaea ATCC 19718 1083518 NP_842540.1 CDS NE2551 NC_004757.1 2789356 2790717 D hypothetical protein 2789356..2790717 Nitrosomonas europaea ATCC 19718 1083519 NP_842541.1 CDS mutM NC_004757.1 2790763 2791578 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 2790763..2791578 Nitrosomonas europaea ATCC 19718 1083520 NP_842542.1 CDS NE2553 NC_004757.1 2791597 2792235 R hypothetical protein complement(2791597..2792235) Nitrosomonas europaea ATCC 19718 1083521 NP_842543.1 CDS typA NC_004757.1 2792248 2794062 R GTP-binding elongation factor complement(2792248..2794062) Nitrosomonas europaea ATCC 19718 1083522 NP_842544.1 CDS NE2555 NC_004757.1 2794192 2794797 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2794192..2794797 Nitrosomonas europaea ATCC 19718 1083523 NP_842545.1 CDS ribAB NC_004757.1 2794794 2795903 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 2794794..2795903 Nitrosomonas europaea ATCC 19718 1083524 NP_842546.1 CDS ribH NC_004757.1 2795959 2796453 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2795959..2796453 Nitrosomonas europaea ATCC 19718 1083525 NP_842547.1 CDS nusB NC_004757.1 2796450 2796953 D antitermination protein NusB 2796450..2796953 Nitrosomonas europaea ATCC 19718 1083526 NP_842548.1 CDS thiL NC_004757.1 2797021 2798019 D AIR synthase 2797021..2798019 Nitrosomonas europaea ATCC 19718 1083527 NP_842549.1 CDS pgpA NC_004757.1 2797997 2798539 D similar to (NC_003295) PROBABLE PHOSPHATIDYL-GLYCEROPHOSPHATASE HYDROLASE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum] evalue=2.00e-33, 51% identity; phosphatidyl-glycerophosphatase hydrolase transmembrane protein 2797997..2798539 Nitrosomonas europaea ATCC 19718 1083528 NP_842550.1 CDS ygaD NC_004757.1 2798536 2799078 D competence-damaged protein 2798536..2799078 Nitrosomonas europaea ATCC 19718 1083529 NP_842551.1 CDS NE2562 NC_004757.1 2799257 2800129 R hypothetical protein complement(2799257..2800129) Nitrosomonas europaea ATCC 19718 1083530 NP_842552.1 CDS NE2563 NC_004757.1 2800911 2802125 R porin complement(2800911..2802125) Nitrosomonas europaea ATCC 19718 1083532 NP_842553.1 CDS recQ NC_004757.1 2802439 2804088 R ATP-dependent DNA helicase RecQ complement(2802439..2804088) Nitrosomonas europaea ATCC 19718 1083533 NP_842554.1 CDS NE2565 NC_004757.1 2804085 2804495 R S4 domain-containing protein complement(2804085..2804495) Nitrosomonas europaea ATCC 19718 1083534 NP_842555.1 CDS NE2566 NC_004757.1 2804585 2805418 R hypothetical protein complement(2804585..2805418) Nitrosomonas europaea ATCC 19718 1083535 NP_842556.1 CDS NE2567 NC_004757.1 2805425 2807164 R hypothetical protein complement(2805425..2807164) Nitrosomonas europaea ATCC 19718 1083536 NP_842557.1 CDS NE2568 NC_004757.1 2807279 2807650 R ArsR family regulatory protein complement(2807279..2807650) Nitrosomonas europaea ATCC 19718 1083537 NP_842558.1 CDS NE2569 NC_004757.1 2807647 2808114 R transmembrane protein complement(2807647..2808114) Nitrosomonas europaea ATCC 19718 1083538 NP_842559.1 CDS NE2570 NC_004757.1 2808142 2808570 R transmembrane protein complement(2808142..2808570) Nitrosomonas europaea ATCC 19718 1083539 NP_842560.1 CDS NE2571 NC_004757.1 2808678 2809541 D metallo-beta-lactamase superfamily protein 2808678..2809541 Nitrosomonas europaea ATCC 19718 1083540 NP_842561.1 CDS NE2572 NC_004757.1 2809591 2810172 R hypothetical protein complement(2809591..2810172) Nitrosomonas europaea ATCC 19718 1083541 NP_842562.1 CDS ycbB NC_004757.1 2810199 2811935 R hypothetical protein complement(2810199..2811935) Nitrosomonas europaea ATCC 19718 1083542 RNA_36 tRNA tRNAGly3 NC_004757.1 6774 6849 D tRNA-Gly 6774..6849 Nitrosomonas europaea ATCC 19718 1081083 RNA_37 tRNA tRNACys1 NC_004757.1 6941 7014 D tRNA-Cys 6941..7014 Nitrosomonas europaea ATCC 19718 1081085 RNA_38 tRNA tRNALeu4 NC_004757.1 7040 7128 D tRNA-Leu 7040..7128 Nitrosomonas europaea ATCC 19718 1081086 RNA_39 tRNA tRNALeu5 NC_004757.1 37623 37708 D tRNA-Leu 37623..37708 Nitrosomonas europaea ATCC 19718 1083546 RNA_40 tRNA tRNAIle1 NC_004757.1 70772 70848 D tRNA-Ile 70772..70848 Nitrosomonas europaea ATCC 19718 1083573 RNA_41 tRNA tRNAAla2 NC_004757.1 70852 70927 D tRNA-Ala 70852..70927 Nitrosomonas europaea ATCC 19718 1083574 RNA_19 tRNA tRNAMet2 NC_004757.1 263039 263115 D tRNA-Met 263039..263115 Nitrosomonas europaea ATCC 19718 1081157 RNA_20 tRNA tRNAGly1 NC_004757.1 317975 318048 D tRNA-Gly 317975..318048 Nitrosomonas europaea ATCC 19718 1081218 RNA_21 tRNA tRNASer2 NC_004757.1 366875 366962 D tRNA-Ser 366875..366962 Nitrosomonas europaea ATCC 19718 1081258 RNA_18 tRNA tRNALeu2 NC_004757.1 392152 392236 R tRNA-Leu complement(392152..392236) Nitrosomonas europaea ATCC 19718 1081280 RNA_22 tRNA tRNALeu3 NC_004757.1 414084 414170 D tRNA-Leu 414084..414170 Nitrosomonas europaea ATCC 19718 1081300 RNA_17 tRNA tRNAVal3 NC_004757.1 429890 429964 R tRNA-Val complement(429890..429964) Nitrosomonas europaea ATCC 19718 1081312 RNA_23 tRNA tRNATyr1 NC_004757.1 451457 451541 D tRNA-Tyr 451457..451541 Nitrosomonas europaea ATCC 19718 1081332 RNA_24 tRNA tRNAGly2 NC_004757.1 451659 451732 D tRNA-Gly 451659..451732 Nitrosomonas europaea ATCC 19718 1081333 RNA_25 tRNA tRNAThr1 NC_004757.1 451760 451834 D tRNA-Thr 451760..451834 Nitrosomonas europaea ATCC 19718 1081334 RNA_26 tRNA tRNAThr2 NC_004757.1 467261 467336 D tRNA-Thr 467261..467336 Nitrosomonas europaea ATCC 19718 1081364 RNA_27 tRNA tRNAArg4 NC_004757.1 545460 545535 D tRNA-Arg 545460..545535 Nitrosomonas europaea ATCC 19718 1081445 RNA_16 tRNA tRNAMet1 NC_004757.1 840333 840408 R tRNA-Met complement(840333..840408) Nitrosomonas europaea ATCC 19718 1081713 RNA_28 tRNA tRNAThr3 NC_004757.1 883969 884044 D tRNA-Thr 883969..884044 Nitrosomonas europaea ATCC 19718 1081754 RNA_15 tRNA tRNAPro2 NC_004757.1 1036497 1036573 R tRNA-Pro complement(1036497..1036573) Nitrosomonas europaea ATCC 19718 1081892 RNA_29 tRNA tRNAMet3 NC_004757.1 1258060 1258136 D tRNA-Met 1258060..1258136 Nitrosomonas europaea ATCC 19718 1082101 RNA_14 tRNA tRNAAsn1 NC_004757.1 1258686 1258761 R tRNA-Asn complement(1258686..1258761) Nitrosomonas europaea ATCC 19718 1082102 RNA_13 tRNA tRNAPhe1 NC_004757.1 1432428 1432503 R tRNA-Phe complement(1432428..1432503) Nitrosomonas europaea ATCC 19718 1082257 RNA_12 tRNA tRNAArg3 NC_004757.1 1432565 1432641 R tRNA-Arg complement(1432565..1432641) Nitrosomonas europaea ATCC 19718 1082258 RNA_11 tRNA tRNAHis1 NC_004757.1 1460700 1460775 R tRNA-His complement(1460700..1460775) Nitrosomonas europaea ATCC 19718 1082278 RNA_10 tRNA tRNAArg2 NC_004757.1 1460827 1460903 R tRNA-Arg complement(1460827..1460903) Nitrosomonas europaea ATCC 19718 1082279 RNA_9 tRNA tRNAPro1 NC_004757.1 1460948 1461024 R tRNA-Pro complement(1460948..1461024) Nitrosomonas europaea ATCC 19718 1082280 RNA_8 tRNA tRNAArg1 NC_004757.1 1630113 1630188 R tRNA-Arg complement(1630113..1630188) Nitrosomonas europaea ATCC 19718 1082448 RNA_30 tRNA tRNALys1 NC_004757.1 1898153 1898228 D tRNA-Lys 1898153..1898228 Nitrosomonas europaea ATCC 19718 1082710 RNA_7 tRNA tRNALeu1 NC_004757.1 1922484 1922568 R tRNA-Leu complement(1922484..1922568) Nitrosomonas europaea ATCC 19718 1082731 RNA_31 tRNA tRNASer3 NC_004757.1 1957547 1957639 D tRNA-Ser 1957547..1957639 Nitrosomonas europaea ATCC 19718 1082763 RNA_6 tRNA tRNAGln1 NC_004757.1 1974071 1974145 R tRNA-Gln complement(1974071..1974145) Nitrosomonas europaea ATCC 19718 1082782 RNA_32 tRNA tRNASer4 NC_004757.1 1988654 1988744 D tRNA-Ser 1988654..1988744 Nitrosomonas europaea ATCC 19718 1082798 RNA_33 tRNA tRNAPro3 NC_004757.1 2069234 2069310 D tRNA-Pro 2069234..2069310 Nitrosomonas europaea ATCC 19718 1082873 RNA_34 tRNA tRNAAla1 NC_004757.1 2134754 2134829 D tRNA-Ala 2134754..2134829 Nitrosomonas europaea ATCC 19718 1082934 RNA_35 tRNA tRNAGlu1 NC_004757.1 2134857 2134932 D tRNA-Glu 2134857..2134932 Nitrosomonas europaea ATCC 19718 1082935 RNA_5 tRNA tRNATrp1 NC_004757.1 2228016 2228091 R tRNA-Trp complement(2228016..2228091) Nitrosomonas europaea ATCC 19718 1083012 RNA_4 tRNA tRNASer1 NC_004757.1 2314468 2314560 R tRNA-Ser complement(2314468..2314560) Nitrosomonas europaea ATCC 19718 1083093 RNA_3 tRNA tRNAAsp1 NC_004757.1 2396643 2396719 R tRNA-Asp complement(2396643..2396719) Nitrosomonas europaea ATCC 19718 1083170 RNA_2 tRNA tRNAVal2 NC_004757.1 2396789 2396864 R tRNA-Val complement(2396789..2396864) Nitrosomonas europaea ATCC 19718 1083171 RNA_1 tRNA tRNAVal1 NC_004757.1 2444800 2444876 R tRNA-Val complement(2444800..2444876) Nitrosomonas europaea ATCC 19718 1083220 RNA_42 rRNA rrnA NC_004757.1 68700 74301 D rRNA operon 68700..74301 Nitrosomonas europaea ATCC 19718 1083571 RNA_45 rRNA 16S_rRNA NC_004757.1 69146 70677 D 16S ribosomal RNA 69146..70677 Nitrosomonas europaea ATCC 19718 1083572 RNA_46 rRNA 23S_rRNA NC_004757.1 71083 73968 D 23S ribosomal RNA 71083..73968 Nitrosomonas europaea ATCC 19718 1083575 RNA_44 rRNA 5S_rRNA NC_004757.1 74038 74155 D 5S ribosomal RNA 74038..74155 Nitrosomonas europaea ATCC 19718 1083577