-- dump date 20140619_164721 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_410702.1 82701136 3785841 69..1499 1 NC_007614.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1499 dnaA 3785841 dnaA Nitrosospira multiformis ATCC 25196 chromosomal replication initiation protein YP_410702.1 69 D 323848 CDS YP_410703.1 82701137 3785842 1719..2828 1 NC_007614.1 DNA polymerase III subunit beta 2828 3785842 Nmul_A0002 Nitrosospira multiformis ATCC 25196 DNA polymerase III subunit beta YP_410703.1 1719 D 323848 CDS YP_410704.1 82701138 3786441 3157..5589 1 NC_007614.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 5589 gyrB 3786441 gyrB Nitrosospira multiformis ATCC 25196 DNA gyrase subunit B YP_410704.1 3157 D 323848 CDS YP_410705.1 82701139 3786442 5730..6980 1 NC_007614.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 6980 glyA 3786442 glyA Nitrosospira multiformis ATCC 25196 serine hydroxymethyltransferase YP_410705.1 5730 D 323848 CDS YP_410706.1 82701140 3786443 7110..7589 1 NC_007614.1 transcriptional regulator NrdR 7589 nrdR 3786443 nrdR Nitrosospira multiformis ATCC 25196 transcriptional regulator NrdR YP_410706.1 7110 D 323848 CDS YP_410707.1 82701141 3786444 7704..8804 1 NC_007614.1 riboflavin biosynthesis protein RibD 8804 3786444 Nmul_A0006 Nitrosospira multiformis ATCC 25196 riboflavin biosynthesis protein RibD YP_410707.1 7704 D 323848 CDS YP_410708.1 82701142 3786445 complement(8891..9454) 1 NC_007614.1 two component Fis family transcriptional regulator 9454 3786445 Nmul_A0007 Nitrosospira multiformis ATCC 25196 two component Fis family transcriptional regulator YP_410708.1 8891 R 323848 CDS YP_410709.1 82701143 3786446 complement(9451..10716) 1 NC_007614.1 periplasmic sensor signal transduction histidine kinase 10716 3786446 Nmul_A0008 Nitrosospira multiformis ATCC 25196 periplasmic sensor signal transduction histidine kinase YP_410709.1 9451 R 323848 CDS YP_410710.1 82701144 3786447 10912..11538 1 NC_007614.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 11538 3786447 Nmul_A0009 Nitrosospira multiformis ATCC 25196 riboflavin synthase subunit alpha YP_410710.1 10912 D 323848 CDS YP_410711.1 82701145 3786448 11535..12668 1 NC_007614.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 12668 3786448 Nmul_A0010 Nitrosospira multiformis ATCC 25196 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein YP_410711.1 11535 D 323848 CDS YP_410712.1 82701146 3786449 12785..13267 1 NC_007614.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 13267 ribH 3786449 ribH Nitrosospira multiformis ATCC 25196 6,7-dimethyl-8-ribityllumazine synthase YP_410712.1 12785 D 323848 CDS YP_410713.1 82701147 3786450 13378..13854 1 NC_007614.1 NusB antitermination factor 13854 3786450 Nmul_A0012 Nitrosospira multiformis ATCC 25196 NusB antitermination factor YP_410713.1 13378 D 323848 CDS YP_410714.1 82701148 3786451 13916..14941 1 NC_007614.1 thiamine-monophosphate kinase 14941 3786451 Nmul_A0013 Nitrosospira multiformis ATCC 25196 thiamine-monophosphate kinase YP_410714.1 13916 D 323848 CDS YP_410715.1 82701149 3786452 14922..15554 1 NC_007614.1 phosphatidylglycerophosphatase A 15554 3786452 Nmul_A0014 Nitrosospira multiformis ATCC 25196 phosphatidylglycerophosphatase A YP_410715.1 14922 D 323848 CDS YP_410716.1 82701150 3786453 15630..16139 1 NC_007614.1 CinA-like protein 16139 3786453 Nmul_A0015 Nitrosospira multiformis ATCC 25196 CinA-like protein YP_410716.1 15630 D 323848 CDS YP_410717.1 82701151 3786454 complement(16151..16798) 1 NC_007614.1 hypothetical protein 16798 3786454 Nmul_A0016 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410717.1 16151 R 323848 CDS YP_410718.1 82701152 3786455 16951..18174 1 NC_007614.1 hypothetical protein 18174 3786455 Nmul_A0017 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410718.1 16951 D 323848 CDS YP_410719.1 82701153 3786456 18171..18386 1 NC_007614.1 hypothetical protein 18386 3786456 Nmul_A0018 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410719.1 18171 D 323848 CDS YP_410720.1 82701154 3786457 18529..19548 1 NC_007614.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 19548 recA 3786457 recA Nitrosospira multiformis ATCC 25196 recombinase A YP_410720.1 18529 D 323848 CDS YP_410721.1 82701155 3786458 19616..20068 1 NC_007614.1 regulatory protein RecX 20068 3786458 Nmul_A0020 Nitrosospira multiformis ATCC 25196 regulatory protein RecX YP_410721.1 19616 D 323848 CDS YP_410722.1 82701156 3786459 20065..20517 1 NC_007614.1 hypothetical protein 20517 3786459 Nmul_A0021 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410722.1 20065 D 323848 CDS YP_410723.1 82701157 3786460 20524..23112 1 NC_007614.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 23112 alaS 3786460 alaS Nitrosospira multiformis ATCC 25196 alanyl-tRNA synthetase YP_410723.1 20524 D 323848 CDS YP_410724.1 82701158 3784011 23153..24103 1 NC_007614.1 thioredoxin reductase 24103 3784011 Nmul_A0023 Nitrosospira multiformis ATCC 25196 thioredoxin reductase YP_410724.1 23153 D 323848 CDS YP_410725.1 82701159 3784012 24258..24893 1 NC_007614.1 Smr protein/MutS2-like 24893 3784012 Nmul_A0024 Nitrosospira multiformis ATCC 25196 Smr protein/MutS2-like YP_410725.1 24258 D 323848 CDS YP_410726.1 82701160 3784013 complement(24924..25319) 1 NC_007614.1 TraR/DksA family transcriptional regulator 25319 3784013 Nmul_A0025 Nitrosospira multiformis ATCC 25196 TraR/DksA family transcriptional regulator YP_410726.1 24924 R 323848 CDS YP_410727.1 82701161 3784014 complement(26103..27338) 1 NC_007614.1 major facilitator transporter 27338 3784014 Nmul_A0026 Nitrosospira multiformis ATCC 25196 major facilitator transporter YP_410727.1 26103 R 323848 CDS YP_410728.1 82701162 3784016 28045..28866 1 NC_007614.1 hypothetical protein 28866 3784016 Nmul_A0027 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410728.1 28045 D 323848 CDS YP_410729.1 82701163 3784017 complement(29878..30336) 1 NC_007614.1 surface antigen protein 30336 3784017 Nmul_A0028 Nitrosospira multiformis ATCC 25196 surface antigen protein YP_410729.1 29878 R 323848 CDS YP_410730.1 82701164 3784018 30389..30721 1 NC_007614.1 hypothetical protein 30721 3784018 Nmul_A0029 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410730.1 30389 D 323848 CDS YP_410731.1 82701165 3784019 complement(30847..32124) 1 NC_007614.1 hypothetical protein 32124 3784019 Nmul_A0030 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410731.1 30847 R 323848 CDS YP_410732.1 82701166 3784020 complement(32159..32398) 1 NC_007614.1 hypothetical protein 32398 3784020 Nmul_A0031 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410732.1 32159 R 323848 CDS YP_410733.1 82701167 3784021 32528..33013 1 NC_007614.1 hypothetical protein 33013 3784021 Nmul_A0032 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410733.1 32528 D 323848 CDS YP_410734.1 82701168 3784022 33010..33522 1 NC_007614.1 hypothetical protein 33522 3784022 Nmul_A0033 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410734.1 33010 D 323848 CDS YP_410735.1 82701169 3784023 33715..34551 1 NC_007614.1 hypothetical protein 34551 3784023 Nmul_A0034 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410735.1 33715 D 323848 CDS YP_410736.1 82701170 3784024 34825..35184 1 NC_007614.1 hypothetical protein 35184 3784024 Nmul_A0035 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410736.1 34825 D 323848 CDS YP_410737.1 82701171 3784025 complement(35230..36420) 1 NC_007614.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 36420 3784025 Nmul_A0036 Nitrosospira multiformis ATCC 25196 S-adenosylmethionine synthetase YP_410737.1 35230 R 323848 CDS YP_410738.1 82701172 3784026 complement(36417..39539) 1 NC_007614.1 E1-E2 type ATPase 39539 3784026 Nmul_A0037 Nitrosospira multiformis ATCC 25196 E1-E2 type ATPase YP_410738.1 36417 R 323848 CDS YP_410739.1 82701173 3784027 39950..41914 1 NC_007614.1 amine oxidase 41914 3784027 Nmul_A0038 Nitrosospira multiformis ATCC 25196 amine oxidase YP_410739.1 39950 D 323848 CDS YP_410740.1 82701174 3784028 complement(41919..43004) 1 NC_007614.1 hypothetical protein 43004 3784028 Nmul_A0039 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410740.1 41919 R 323848 CDS YP_410741.1 82701175 3786383 complement(43320..43700) 1 NC_007614.1 glyoxalase/bleomycin resistance protein/dioxygenase 43700 3786383 Nmul_A0040 Nitrosospira multiformis ATCC 25196 glyoxalase/bleomycin resistance protein/dioxygenase YP_410741.1 43320 R 323848 CDS YP_410742.1 82701176 3786384 43871..44449 1 NC_007614.1 TetR family transcriptional regulator 44449 3786384 Nmul_A0041 Nitrosospira multiformis ATCC 25196 TetR family transcriptional regulator YP_410742.1 43871 D 323848 CDS YP_410743.1 82701177 3786385 44617..45792 1 NC_007614.1 secretion protein HlyD 45792 3786385 Nmul_A0042 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_410743.1 44617 D 323848 CDS YP_410744.1 82701178 3786386 45802..48930 1 NC_007614.1 hydrophobe/amphiphile efflux-1 protein 48930 3786386 Nmul_A0043 Nitrosospira multiformis ATCC 25196 hydrophobe/amphiphile efflux-1 protein YP_410744.1 45802 D 323848 CDS YP_410745.1 82701179 3786387 complement(49143..49829) 1 NC_007614.1 hypothetical protein 49829 3786387 Nmul_A0044 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410745.1 49143 R 323848 CDS YP_410746.1 82701180 3786388 50064..53867 1 NC_007614.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 53867 metH 3786388 metH Nitrosospira multiformis ATCC 25196 B12-dependent methionine synthase YP_410746.1 50064 D 323848 CDS YP_410747.1 82701181 3786389 53982..54362 1 NC_007614.1 IS298, transposase OrfA 54362 3786389 Nmul_A0046 Nitrosospira multiformis ATCC 25196 IS298, transposase OrfA YP_410747.1 53982 D 323848 CDS YP_410748.1 82701182 3786390 54212..54745 1 NC_007614.1 transposase IS4 54745 3786390 Nmul_A0047 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_410748.1 54212 D 323848 CDS YP_410749.1 82701183 3786391 54842..55651 1 NC_007614.1 hypothetical protein 55651 3786391 Nmul_A0048 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410749.1 54842 D 323848 CDS YP_410750.1 82701184 3786392 complement(55669..56367) 1 NC_007614.1 hypothetical protein 56367 3786392 Nmul_A0049 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410750.1 55669 R 323848 CDS YP_410751.1 82701185 3786393 complement(56539..58686) 1 NC_007614.1 (p)ppGpp synthetase SpoT/RelA 58686 3786393 Nmul_A0050 Nitrosospira multiformis ATCC 25196 (p)ppGpp synthetase SpoT/RelA YP_410751.1 56539 R 323848 CDS YP_410752.1 82701186 3786394 complement(58820..59026) 1 NC_007614.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 59026 3786394 Nmul_A0051 Nitrosospira multiformis ATCC 25196 DNA-directed RNA polymerase subunit omega YP_410752.1 58820 R 323848 CDS YP_410753.1 82701187 3786395 complement(59209..59841) 1 NC_007614.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 59841 gmk 3786395 gmk Nitrosospira multiformis ATCC 25196 guanylate kinase YP_410753.1 59209 R 323848 CDS YP_410754.1 82701188 3786396 complement(60014..60454) 1 NC_007614.1 thioredoxin 60454 3786396 Nmul_A0053 Nitrosospira multiformis ATCC 25196 thioredoxin YP_410754.1 60014 R 323848 CDS YP_410755.1 82701189 3786397 60899..61306 1 NC_007614.1 transposase IS3/IS911 61306 3786397 Nmul_A0054 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_410755.1 60899 D 323848 CDS YP_410756.1 82701190 3786398 61303..62151 1 NC_007614.1 integrase catalytic subunit 62151 3786398 Nmul_A0055 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_410756.1 61303 D 323848 CDS YP_410757.1 82701191 3786399 complement(62655..63260) 1 NC_007614.1 hypothetical protein 63260 3786399 Nmul_A0056 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410757.1 62655 R 323848 CDS YP_410758.1 82701192 3786400 complement(63303..64268) 1 NC_007614.1 peptidase S49 64268 3786400 Nmul_A0057 Nitrosospira multiformis ATCC 25196 peptidase S49 YP_410758.1 63303 R 323848 CDS YP_410759.1 82701193 3786401 complement(64265..65140) 1 NC_007614.1 hypothetical protein 65140 3786401 Nmul_A0058 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410759.1 64265 R 323848 CDS YP_410760.1 82701194 3786402 complement(65529..66923) 1 NC_007614.1 hypothetical protein 66923 3786402 Nmul_A0059 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410760.1 65529 R 323848 CDS YP_410761.1 82701195 3785784 complement(66910..67335) 1 NC_007614.1 hypothetical protein 67335 3785784 Nmul_A0060 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410761.1 66910 R 323848 CDS YP_410762.1 82701196 3785785 complement(67332..67607) 1 NC_007614.1 hypothetical protein 67607 3785785 Nmul_A0061 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410762.1 67332 R 323848 CDS YP_410763.1 82701197 3785786 complement(68549..68803) 1 NC_007614.1 putative transcriptional regulator 68803 3785786 Nmul_A0062 Nitrosospira multiformis ATCC 25196 putative transcriptional regulator YP_410763.1 68549 R 323848 CDS YP_410764.1 82701198 3785787 complement(68916..69539) 1 NC_007614.1 hypothetical protein 69539 3785787 Nmul_A0063 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410764.1 68916 R 323848 CDS YP_410765.1 82701199 3785788 complement(69640..70902) 1 NC_007614.1 Phage integrase 70902 3785788 Nmul_A0064 Nitrosospira multiformis ATCC 25196 Phage integrase YP_410765.1 69640 R 323848 CDS YP_410766.1 82701200 3785789 complement(71155..72048) 1 NC_007614.1 hypothetical protein 72048 3785789 Nmul_A0065 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410766.1 71155 R 323848 CDS YP_410767.1 82701201 3785790 72220..72936 1 NC_007614.1 ribonuclease PH 72936 3785790 Nmul_A0066 Nitrosospira multiformis ATCC 25196 ribonuclease PH YP_410767.1 72220 D 323848 CDS YP_410768.1 82701202 3785791 72945..73538 1 NC_007614.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 73538 3785791 Nmul_A0067 Nitrosospira multiformis ATCC 25196 putative deoxyribonucleotide triphosphate pyrophosphatase YP_410768.1 72945 D 323848 CDS YP_410769.1 82701203 3785792 73643..74869 1 NC_007614.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 74869 3785792 Nmul_A0068 Nitrosospira multiformis ATCC 25196 coproporphyrinogen III oxidase YP_410769.1 73643 D 323848 CDS YP_410770.1 82701204 3785793 complement(74876..75565) 1 NC_007614.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 75565 trmB 3785793 trmB Nitrosospira multiformis ATCC 25196 tRNA (guanine-N(7)-)-methyltransferase YP_410770.1 74876 R 323848 CDS YP_410771.1 82701205 3785794 complement(75617..76411) 1 NC_007614.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 76411 thiG 3785794 thiG Nitrosospira multiformis ATCC 25196 thiazole synthase YP_410771.1 75617 R 323848 CDS YP_410772.1 82701206 3785795 complement(76415..76903) 1 NC_007614.1 thiamine biosynthesis protein ThiS 76903 3785795 Nmul_A0071 Nitrosospira multiformis ATCC 25196 thiamine biosynthesis protein ThiS YP_410772.1 76415 R 323848 CDS YP_410773.1 82701207 3785796 77017..77475 1 NC_007614.1 hypothetical protein 77475 3785796 Nmul_A0072 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410773.1 77017 D 323848 CDS YP_410774.1 82701208 3785797 complement(77708..78220) 1 NC_007614.1 hypothetical protein 78220 3785797 Nmul_A0073 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410774.1 77708 R 323848 CDS YP_410775.1 82701209 3785798 78484..78903 1 NC_007614.1 hypothetical protein 78903 3785798 Nmul_A0074 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410775.1 78484 D 323848 CDS YP_410776.1 82701210 3785799 complement(79069..79404) 1 NC_007614.1 membrane protein, Kef-type K+ transport system NAD-binding component 79404 3785799 Nmul_A0075 Nitrosospira multiformis ATCC 25196 membrane protein, Kef-type K+ transport system NAD-binding component YP_410776.1 79069 R 323848 CDS YP_410777.1 82701211 3785800 79526..80437 1 NC_007614.1 Ion transport protein 80437 3785800 Nmul_A0076 Nitrosospira multiformis ATCC 25196 Ion transport protein YP_410777.1 79526 D 323848 CDS YP_410778.1 82701212 3785802 80802..82322 1 NC_007614.1 AsmA 82322 3785802 Nmul_A0077 Nitrosospira multiformis ATCC 25196 AsmA YP_410778.1 80802 D 323848 CDS YP_410779.1 82701213 3785803 82322..83473 1 NC_007614.1 A/G-specific adenine glycosylase 83473 3785803 Nmul_A0078 Nitrosospira multiformis ATCC 25196 A/G-specific adenine glycosylase YP_410779.1 82322 D 323848 CDS YP_410780.1 82701214 3785804 83497..84150 1 NC_007614.1 5-formyltetrahydrofolate cyclo-ligase 84150 3785804 Nmul_A0079 Nitrosospira multiformis ATCC 25196 5-formyltetrahydrofolate cyclo-ligase YP_410780.1 83497 D 323848 CDS YP_410781.1 82701215 3785805 complement(84182..84817) 1 NC_007614.1 aromatic acid decarboxylase 84817 3785805 Nmul_A0080 Nitrosospira multiformis ATCC 25196 aromatic acid decarboxylase YP_410781.1 84182 R 323848 CDS YP_410782.1 82701216 3785806 complement(84905..85744) 1 NC_007614.1 hypothetical protein 85744 3785806 Nmul_A0081 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410782.1 84905 R 323848 CDS YP_410783.2 162139866 3785807 complement(85831..86775) 1 NC_007614.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 86775 3785807 Nmul_A0082 Nitrosospira multiformis ATCC 25196 HPr kinase/phosphorylase YP_410783.2 85831 R 323848 CDS YP_410784.1 82701218 3785808 complement(86952..87254) 1 NC_007614.1 sigma 54 modulation protein/ribosomal protein S30EA 87254 3785808 Nmul_A0083 Nitrosospira multiformis ATCC 25196 sigma 54 modulation protein/ribosomal protein S30EA YP_410784.1 86952 R 323848 CDS YP_410785.1 82701219 3785809 complement(87281..88747) 1 NC_007614.1 sigma-54 (RpoN) 88747 3785809 Nmul_A0084 Nitrosospira multiformis ATCC 25196 sigma-54 (RpoN) YP_410785.1 87281 R 323848 CDS YP_410786.1 82701220 3785810 complement(88798..89604) 1 NC_007614.1 ABC transporter-like protein 89604 3785810 Nmul_A0085 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_410786.1 88798 R 323848 CDS YP_410787.1 82701221 3785811 complement(89617..90189) 1 NC_007614.1 OstA-like protein 90189 3785811 Nmul_A0086 Nitrosospira multiformis ATCC 25196 OstA-like protein YP_410787.1 89617 R 323848 CDS YP_410788.1 82701222 3785812 complement(90173..90745) 1 NC_007614.1 hypothetical protein 90745 3785812 Nmul_A0087 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410788.1 90173 R 323848 CDS YP_410789.1 82701223 3785813 complement(90742..91266) 1 NC_007614.1 phosphatase kdsC 91266 3785813 Nmul_A0088 Nitrosospira multiformis ATCC 25196 phosphatase kdsC YP_410789.1 90742 R 323848 CDS YP_410790.1 82701224 3785814 complement(91488..92447) 1 NC_007614.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 92447 ispH 3785814 ispH Nitrosospira multiformis ATCC 25196 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_410790.1 91488 R 323848 CDS YP_410791.1 82701225 3785815 complement(92720..93715) 1 NC_007614.1 periplasmic binding protein 93715 3785815 Nmul_A0090 Nitrosospira multiformis ATCC 25196 periplasmic binding protein YP_410791.1 92720 R 323848 CDS YP_410792.1 82701226 3785816 complement(93840..94994) 1 NC_007614.1 3-deoxy-7-phosphoheptulonate synthase 94994 3785816 Nmul_A0091 Nitrosospira multiformis ATCC 25196 3-deoxy-7-phosphoheptulonate synthase YP_410792.1 93840 R 323848 CDS YP_410793.1 82701227 3785817 95266..96237 1 NC_007614.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 96237 miaA 3785817 miaA Nitrosospira multiformis ATCC 25196 tRNA delta(2)-isopentenylpyrophosphate transferase YP_410793.1 95266 D 323848 CDS YP_410794.1 82701228 3785818 96297..96656 1 NC_007614.1 transport-associated protein 96656 3785818 Nmul_A0093 Nitrosospira multiformis ATCC 25196 transport-associated protein YP_410794.1 96297 D 323848 CDS YP_410795.1 82701229 3785819 96722..99061 1 NC_007614.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 99061 fadE 3785819 fadE Nitrosospira multiformis ATCC 25196 acyl-CoA dehydrogenase YP_410795.1 96722 D 323848 CDS YP_410796.1 82701230 3785820 99069..101060 1 NC_007614.1 AMP-dependent synthetase and ligase 101060 3785820 Nmul_A0095 Nitrosospira multiformis ATCC 25196 AMP-dependent synthetase and ligase YP_410796.1 99069 D 323848 CDS YP_410797.1 82701231 3785821 101126..101545 1 NC_007614.1 thioesterase superfamily protein 101545 3785821 Nmul_A0096 Nitrosospira multiformis ATCC 25196 thioesterase superfamily protein YP_410797.1 101126 D 323848 CDS YP_410798.1 82701232 3786364 101573..104125 1 NC_007614.1 3-hydroxyacyl-CoA dehydrogenase 104125 3786364 Nmul_A0097 Nitrosospira multiformis ATCC 25196 3-hydroxyacyl-CoA dehydrogenase YP_410798.1 101573 D 323848 CDS YP_410799.1 82701233 3786365 104286..105488 1 NC_007614.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 105488 3786365 Nmul_A0098 Nitrosospira multiformis ATCC 25196 acetyl-CoA acetyltransferase YP_410799.1 104286 D 323848 CDS YP_410800.1 82701234 3786366 complement(105585..105773) 1 NC_007614.1 hypothetical protein 105773 3786366 Nmul_A0099 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410800.1 105585 R 323848 CDS YP_410801.1 82701235 3786367 106448..106771 1 NC_007614.1 hypothetical protein 106771 3786367 Nmul_A0100 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410801.1 106448 D 323848 CDS YP_410802.1 82701236 3786368 107117..107935 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 107935 3786368 Nmul_A0101 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_410802.1 107117 D 323848 CDS YP_410803.1 82701237 3786369 complement(108092..108877) 1 NC_007614.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 108877 3786369 Nmul_A0102 Nitrosospira multiformis ATCC 25196 spermidine synthase YP_410803.1 108092 R 323848 CDS YP_410804.1 82701238 3786370 109025..109534 1 NC_007614.1 hypothetical protein 109534 3786370 Nmul_A0103 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410804.1 109025 D 323848 CDS YP_410805.1 82701239 3786371 109727..111196 1 NC_007614.1 Sel1 repeat-containing protein 111196 3786371 Nmul_A0104 Nitrosospira multiformis ATCC 25196 Sel1 repeat-containing protein YP_410805.1 109727 D 323848 CDS YP_410806.1 82701240 3786372 111740..112558 1 NC_007614.1 hypothetical protein 112558 3786372 Nmul_A0105 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410806.1 111740 D 323848 CDS YP_410807.1 82701241 3786373 complement(112666..113520) 1 NC_007614.1 Mg(2+) chelatase family protein 113520 3786373 Nmul_A0106 Nitrosospira multiformis ATCC 25196 Mg(2+) chelatase family protein YP_410807.1 112666 R 323848 CDS YP_410808.1 82701242 3786374 113563..115197 1 NC_007614.1 recombinase 115197 3786374 Nmul_A0107 Nitrosospira multiformis ATCC 25196 recombinase YP_410808.1 113563 D 323848 CDS YP_410809.1 82701243 3786375 115256..115522 1 NC_007614.1 transposase IS3/IS911 115522 3786375 Nmul_A0108 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_410809.1 115256 D 323848 CDS YP_410810.1 82701244 3786376 115516..116337 1 NC_007614.1 integrase catalytic subunit 116337 3786376 Nmul_A0109 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_410810.1 115516 D 323848 CDS YP_410811.1 82701245 3786377 116675..117574 1 NC_007614.1 hypothetical protein 117574 3786377 Nmul_A0110 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410811.1 116675 D 323848 CDS YP_410812.1 82701246 3786378 complement(117665..118531) 1 NC_007614.1 hypothetical protein 118531 3786378 Nmul_A0111 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410812.1 117665 R 323848 CDS YP_410813.1 82701247 3786379 complement(118570..118824) 1 NC_007614.1 hypothetical protein 118824 3786379 Nmul_A0112 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410813.1 118570 R 323848 CDS YP_410814.1 82701248 3786380 119515..120090 1 NC_007614.1 hypothetical protein 120090 3786380 Nmul_A0113 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410814.1 119515 D 323848 CDS YP_410815.1 82701249 3786381 complement(120420..121574) 1 NC_007614.1 hypothetical protein 121574 3786381 Nmul_A0114 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410815.1 120420 R 323848 CDS YP_410816.1 82701250 3786382 complement(121814..122899) 1 NC_007614.1 hypothetical protein 122899 3786382 Nmul_A0115 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410816.1 121814 R 323848 CDS YP_410817.1 82701251 3785764 122963..123208 1 NC_007614.1 hypothetical protein 123208 3785764 Nmul_A0116 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410817.1 122963 D 323848 CDS YP_410818.1 82701252 3785765 123482..123838 1 NC_007614.1 hypothetical protein 123838 3785765 Nmul_A0117 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410818.1 123482 D 323848 CDS YP_410819.1 82701253 3785766 123835..124119 1 NC_007614.1 XRE family transcriptional regulator 124119 3785766 Nmul_A0118 Nitrosospira multiformis ATCC 25196 XRE family transcriptional regulator YP_410819.1 123835 D 323848 CDS YP_410820.1 82701254 3785767 124924..126393 1 NC_007614.1 cytidine/deoxycytidylate deaminase zinc-binding subunit 126393 3785767 Nmul_A0119 Nitrosospira multiformis ATCC 25196 cytidine/deoxycytidylate deaminase zinc-binding subunit YP_410820.1 124924 D 323848 CDS YP_410821.1 82701255 3785768 126615..127904 1 NC_007614.1 ATP-dependent OLD family endonuclease 127904 3785768 Nmul_A0120 Nitrosospira multiformis ATCC 25196 ATP-dependent OLD family endonuclease YP_410821.1 126615 D 323848 CDS YP_410822.1 82701256 3785769 127901..128551 1 NC_007614.1 hypothetical protein 128551 3785769 Nmul_A0121 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410822.1 127901 D 323848 CDS YP_410823.1 82701257 3785770 complement(128686..129504) 1 NC_007614.1 hypothetical protein 129504 3785770 Nmul_A0122 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410823.1 128686 R 323848 CDS YP_410824.1 82701258 3785771 complement(129768..129983) 1 NC_007614.1 hypothetical protein 129983 3785771 Nmul_A0123 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410824.1 129768 R 323848 CDS YP_410825.1 82701259 3785772 complement(130118..130807) 1 NC_007614.1 Mg(2+) chelatase family protein 130807 3785772 Nmul_A0124 Nitrosospira multiformis ATCC 25196 Mg(2+) chelatase family protein YP_410825.1 130118 R 323848 CDS YP_410826.1 82701260 3785773 complement(130913..131215) 1 NC_007614.1 hypothetical protein 131215 3785773 Nmul_A0125 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410826.1 130913 R 323848 CDS YP_410827.1 82701261 3785774 131312..132346 1 NC_007614.1 aminoglycoside phosphotransferase 132346 3785774 Nmul_A0126 Nitrosospira multiformis ATCC 25196 aminoglycoside phosphotransferase YP_410827.1 131312 D 323848 CDS YP_410828.1 82701262 3785775 132372..133076 1 NC_007614.1 nucleotidyl transferase 133076 3785775 Nmul_A0127 Nitrosospira multiformis ATCC 25196 nucleotidyl transferase YP_410828.1 132372 D 323848 CDS YP_410829.1 82701263 3785776 133190..134512 1 NC_007614.1 peptidase M24 134512 3785776 Nmul_A0128 Nitrosospira multiformis ATCC 25196 peptidase M24 YP_410829.1 133190 D 323848 CDS YP_410830.1 82701264 3785777 134512..134856 1 NC_007614.1 hypothetical protein 134856 3785777 Nmul_A0129 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410830.1 134512 D 323848 CDS YP_410831.1 82701265 3785778 134929..136236 1 NC_007614.1 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 136236 3785778 Nmul_A0130 Nitrosospira multiformis ATCC 25196 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_410831.1 134929 D 323848 CDS YP_410832.1 82701266 3785779 136565..137578 1 NC_007614.1 dihydrouridine synthase TIM-barrel protein nifR3 137578 3785779 Nmul_A0131 Nitrosospira multiformis ATCC 25196 dihydrouridine synthase TIM-barrel protein nifR3 YP_410832.1 136565 D 323848 CDS YP_410833.1 82701267 3785780 137575..137817 1 NC_007614.1 Fis family transcriptional regulator 137817 3785780 Nmul_A0132 Nitrosospira multiformis ATCC 25196 Fis family transcriptional regulator YP_410833.1 137575 D 323848 CDS YP_410834.1 82701268 3785781 137927..139489 1 NC_007614.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 139489 purH 3785781 purH Nitrosospira multiformis ATCC 25196 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_410834.1 137927 D 323848 CDS YP_410835.1 82701269 3785782 139749..141056 1 NC_007614.1 phosphoribosylamine--glycine ligase 141056 3785782 Nmul_A0134 Nitrosospira multiformis ATCC 25196 phosphoribosylamine--glycine ligase YP_410835.1 139749 D 323848 CDS YP_410836.1 82701270 3785783 141112..142011 1 NC_007614.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 142011 3785783 Nmul_A0135 Nitrosospira multiformis ATCC 25196 coproporphyrinogen III oxidase YP_410836.1 141112 D 323848 CDS YP_410837.1 82701271 3784108 142339..142740 1 NC_007614.1 hypothetical protein 142740 3784108 Nmul_A0136 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410837.1 142339 D 323848 CDS YP_410838.1 82701272 3784109 142940..143203 1 NC_007614.1 transposase IS3/IS911 143203 3784109 Nmul_A0137 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_410838.1 142940 D 323848 CDS YP_410839.1 82701273 3784110 143230..144060 1 NC_007614.1 integrase catalytic subunit 144060 3784110 Nmul_A0138 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_410839.1 143230 D 323848 CDS YP_410840.1 82701274 3784111 complement(144447..145307) 1 NC_007614.1 hypothetical protein 145307 3784111 Nmul_A0139 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410840.1 144447 R 323848 CDS YP_410841.1 82701275 3784112 145691..146890 1 NC_007614.1 hypothetical protein 146890 3784112 Nmul_A0140 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410841.1 145691 D 323848 CDS YP_410842.1 82701276 3784113 147423..149114 1 NC_007614.1 carbamoyltransferase 149114 3784113 Nmul_A0141 Nitrosospira multiformis ATCC 25196 carbamoyltransferase YP_410842.1 147423 D 323848 CDS YP_410843.1 82701277 3784114 149141..150487 1 NC_007614.1 hypothetical protein 150487 3784114 Nmul_A0142 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410843.1 149141 D 323848 CDS YP_410844.1 82701278 3784115 complement(150565..152610) 1 NC_007614.1 ATP-dependent OLD family endonuclease 152610 3784115 Nmul_A0143 Nitrosospira multiformis ATCC 25196 ATP-dependent OLD family endonuclease YP_410844.1 150565 R 323848 CDS YP_410845.1 82701279 3784116 complement(152774..153217) 1 NC_007614.1 cytidine/deoxycytidylate deaminase zinc-binding subunit 153217 3784116 Nmul_A0144 Nitrosospira multiformis ATCC 25196 cytidine/deoxycytidylate deaminase zinc-binding subunit YP_410845.1 152774 R 323848 CDS YP_410846.1 82701280 3784117 complement(153308..154165) 1 NC_007614.1 GCN5-like N-acetyltransferase 154165 3784117 Nmul_A0145 Nitrosospira multiformis ATCC 25196 GCN5-like N-acetyltransferase YP_410846.1 153308 R 323848 CDS YP_410847.1 82701281 3784118 154328..155083 1 NC_007614.1 hypothetical protein 155083 3784118 Nmul_A0146 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410847.1 154328 D 323848 CDS YP_410848.1 82701282 3784120 complement(155500..156180) 1 NC_007614.1 hypothetical protein 156180 3784120 Nmul_A0147 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410848.1 155500 R 323848 CDS YP_410849.1 82701283 3784121 complement(156242..156661) 1 NC_007614.1 hypothetical protein 156661 3784121 Nmul_A0148 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410849.1 156242 R 323848 CDS YP_410850.1 82701284 3784122 complement(157188..157667) 1 NC_007614.1 hypothetical protein 157667 3784122 Nmul_A0149 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410850.1 157188 R 323848 CDS YP_410851.1 82701285 3784123 complement(158058..160496) 1 NC_007614.1 spermidine synthase-like 160496 3784123 Nmul_A0150 Nitrosospira multiformis ATCC 25196 spermidine synthase-like YP_410851.1 158058 R 323848 CDS YP_410852.1 82701286 3785483 complement(160502..161212) 1 NC_007614.1 protein-L-isoaspartate O-methyltransferase 161212 3785483 Nmul_A0151 Nitrosospira multiformis ATCC 25196 protein-L-isoaspartate O-methyltransferase YP_410852.1 160502 R 323848 CDS YP_410853.1 82701287 3785484 complement(161395..161859) 1 NC_007614.1 hypothetical protein 161859 3785484 Nmul_A0152 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410853.1 161395 R 323848 CDS YP_410854.1 82701288 3785485 162176..162592 1 NC_007614.1 hypothetical protein 162592 3785485 Nmul_A0153 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410854.1 162176 D 323848 CDS YP_410855.1 82701289 3785486 162661..163308 1 NC_007614.1 hypothetical protein 163308 3785486 Nmul_A0154 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410855.1 162661 D 323848 CDS YP_410856.1 82701290 3785488 164173..164859 1 NC_007614.1 nuclease 164859 3785488 Nmul_A0156 Nitrosospira multiformis ATCC 25196 nuclease YP_410856.1 164173 D 323848 CDS YP_410857.1 82701291 3785489 complement(164920..165114) 1 NC_007614.1 hypothetical protein 165114 3785489 Nmul_A0157 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410857.1 164920 R 323848 CDS YP_410858.1 82701292 3785490 complement(165600..166439) 1 NC_007614.1 hypothetical protein 166439 3785490 Nmul_A0158 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410858.1 165600 R 323848 CDS YP_410859.1 82701293 3785491 complement(167297..167752) 1 NC_007614.1 hypothetical protein 167752 3785491 Nmul_A0159 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410859.1 167297 R 323848 CDS YP_410860.1 82701294 3785492 168967..169290 1 NC_007614.1 hypothetical protein 169290 3785492 Nmul_A0160 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410860.1 168967 D 323848 CDS YP_410861.1 82701295 3785493 complement(169506..169916) 1 NC_007614.1 adenyltransferase 169916 3785493 Nmul_A0161 Nitrosospira multiformis ATCC 25196 adenyltransferase YP_410861.1 169506 R 323848 CDS YP_410862.1 82701296 3785494 170422..170775 1 NC_007614.1 hypothetical protein 170775 3785494 Nmul_A0162 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410862.1 170422 D 323848 CDS YP_410863.1 82701297 3785495 complement(170832..171245) 1 NC_007614.1 response regulator receiver domain-containing protein 171245 3785495 Nmul_A0163 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_410863.1 170832 R 323848 CDS YP_410864.1 82701298 3785496 complement(171712..172614) 1 NC_007614.1 patatin 172614 3785496 Nmul_A0164 Nitrosospira multiformis ATCC 25196 patatin YP_410864.1 171712 R 323848 CDS YP_410865.1 82701299 3785497 complement(173234..173473) 1 NC_007614.1 LuxR family transcriptional regulator 173473 3785497 Nmul_A0165 Nitrosospira multiformis ATCC 25196 LuxR family transcriptional regulator YP_410865.1 173234 R 323848 CDS YP_410866.1 82701300 3785498 complement(173494..173874) 1 NC_007614.1 hypothetical protein 173874 3785498 Nmul_A0166 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410866.1 173494 R 323848 CDS YP_410867.1 82701301 3785499 174264..174983 1 NC_007614.1 hypothetical protein 174983 3785499 Nmul_A0167 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410867.1 174264 D 323848 CDS YP_410868.1 82701302 3785500 complement(175290..176138) 1 NC_007614.1 integrase catalytic subunit 176138 3785500 Nmul_A0168 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_410868.1 175290 R 323848 CDS YP_410869.1 82701303 3785501 complement(176135..176542) 1 NC_007614.1 transposase IS3/IS911 176542 3785501 Nmul_A0169 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_410869.1 176135 R 323848 CDS YP_410870.1 82701304 3785502 177163..178338 1 NC_007614.1 group 1 glycosyl transferase 178338 3785502 Nmul_A0170 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_410870.1 177163 D 323848 CDS YP_410871.1 82701305 3785079 complement(178346..179500) 1 NC_007614.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 179500 3785079 Nmul_A0171 Nitrosospira multiformis ATCC 25196 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_410871.1 178346 R 323848 CDS YP_410872.1 82701306 3785080 179913..180842 1 NC_007614.1 2-hydroxy-3-oxopropionate reductase 180842 3785080 Nmul_A0172 Nitrosospira multiformis ATCC 25196 2-hydroxy-3-oxopropionate reductase YP_410872.1 179913 D 323848 CDS YP_410873.1 82701307 3785081 180867..182324 1 NC_007614.1 D-lactate dehydrogenase (cytochrome) 182324 3785081 Nmul_A0173 Nitrosospira multiformis ATCC 25196 D-lactate dehydrogenase (cytochrome) YP_410873.1 180867 D 323848 CDS YP_410874.1 82701308 3785082 182374..183468 1 NC_007614.1 glycolate oxidase FAD binding subunit 183468 glcE 3785082 glcE Nitrosospira multiformis ATCC 25196 glycolate oxidase FAD binding subunit YP_410874.1 182374 D 323848 CDS YP_410875.1 82701309 3785083 183469..184818 1 NC_007614.1 glycolate oxidase iron-sulfur subunit 184818 glcF 3785083 glcF Nitrosospira multiformis ATCC 25196 glycolate oxidase iron-sulfur subunit YP_410875.1 183469 D 323848 CDS YP_410876.1 82701310 3785084 185213..187543 1 NC_007614.1 cell division FtsK/SpoIIIE 187543 3785084 Nmul_A0176 Nitrosospira multiformis ATCC 25196 cell division FtsK/SpoIIIE YP_410876.1 185213 D 323848 CDS YP_410877.1 82701311 3785085 complement(187831..188661) 1 NC_007614.1 ammonia monooxygenase/methane monooxygenase subunit C 188661 3785085 Nmul_A0177 Nitrosospira multiformis ATCC 25196 ammonia monooxygenase/methane monooxygenase subunit C YP_410877.1 187831 R 323848 CDS YP_410878.1 82701312 3785086 188945..189568 1 NC_007614.1 outer membrane lipoprotein carrier protein LolA 189568 3785086 Nmul_A0178 Nitrosospira multiformis ATCC 25196 outer membrane lipoprotein carrier protein LolA YP_410878.1 188945 D 323848 CDS YP_410879.1 82701313 3785087 189561..190874 1 NC_007614.1 recombination factor protein RarA 190874 3785087 Nmul_A0179 Nitrosospira multiformis ATCC 25196 recombination factor protein RarA YP_410879.1 189561 D 323848 CDS YP_410880.1 82701314 3785088 190904..192274 1 NC_007614.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 192274 3785088 Nmul_A0180 Nitrosospira multiformis ATCC 25196 seryl-tRNA synthetase YP_410880.1 190904 D 323848 CDS YP_410881.1 82701315 3785089 192328..193038 1 NC_007614.1 hypothetical protein 193038 3785089 Nmul_A0181 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410881.1 192328 D 323848 CDS YP_410882.1 82701316 3785090 complement(193159..193728) 1 NC_007614.1 hypothetical protein 193728 3785090 Nmul_A0182 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410882.1 193159 R 323848 CDS YP_410883.1 82701317 3785091 194765..195898 1 NC_007614.1 cytochrome c oxidase subunit II 195898 3785091 Nmul_A0183 Nitrosospira multiformis ATCC 25196 cytochrome c oxidase subunit II YP_410883.1 194765 D 323848 CDS YP_410884.1 82701318 3785092 195918..197498 1 NC_007614.1 cytochrome-c oxidase 197498 3785092 Nmul_A0184 Nitrosospira multiformis ATCC 25196 cytochrome-c oxidase YP_410884.1 195918 D 323848 CDS YP_410885.1 82701319 3785093 197618..198175 1 NC_007614.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 198175 3785093 Nmul_A0185 Nitrosospira multiformis ATCC 25196 cytochrome C oxidase assembly protein YP_410885.1 197618 D 323848 CDS YP_410886.1 82701320 3785094 198172..198378 1 NC_007614.1 hypothetical protein 198378 3785094 Nmul_A0186 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410886.1 198172 D 323848 CDS YP_410887.1 82701321 3785095 198409..199263 1 NC_007614.1 cytochrome c oxidase subunit III 199263 3785095 Nmul_A0187 Nitrosospira multiformis ATCC 25196 cytochrome c oxidase subunit III YP_410887.1 198409 D 323848 CDS YP_410888.1 82701322 3785096 complement(199295..199486) 1 NC_007614.1 putative transmembrane protein 199486 3785096 Nmul_A0188 Nitrosospira multiformis ATCC 25196 putative transmembrane protein YP_410888.1 199295 R 323848 CDS YP_410889.1 82701323 3785097 199622..200263 1 NC_007614.1 SURF1 family protein 200263 3785097 Nmul_A0189 Nitrosospira multiformis ATCC 25196 SURF1 family protein YP_410889.1 199622 D 323848 CDS YP_410890.1 82701324 3785863 200241..200846 1 NC_007614.1 putative transmembrane protein 200846 3785863 Nmul_A0190 Nitrosospira multiformis ATCC 25196 putative transmembrane protein YP_410890.1 200241 D 323848 CDS YP_410891.1 82701325 3785864 200970..201866 1 NC_007614.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 201866 3785864 Nmul_A0191 Nitrosospira multiformis ATCC 25196 protoheme IX farnesyltransferase YP_410891.1 200970 D 323848 CDS YP_410892.1 82701326 3785865 201876..202493 1 NC_007614.1 electron transport protein SCO1/SenC 202493 3785865 Nmul_A0192 Nitrosospira multiformis ATCC 25196 electron transport protein SCO1/SenC YP_410892.1 201876 D 323848 CDS YP_410893.1 82701327 3785866 complement(202579..204015) 1 NC_007614.1 D-lactate dehydrogenase (cytochrome) 204015 3785866 Nmul_A0193 Nitrosospira multiformis ATCC 25196 D-lactate dehydrogenase (cytochrome) YP_410893.1 202579 R 323848 CDS YP_410894.1 82701328 3785867 complement(204026..204613) 1 NC_007614.1 transport-associated protein 204613 3785867 Nmul_A0194 Nitrosospira multiformis ATCC 25196 transport-associated protein YP_410894.1 204026 R 323848 CDS YP_410895.1 82701329 3785868 complement(204830..205189) 1 NC_007614.1 hypothetical protein 205189 3785868 Nmul_A0195 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410895.1 204830 R 323848 CDS YP_410896.1 82701330 3785869 205311..206177 1 NC_007614.1 hypothetical protein 206177 3785869 Nmul_A0196 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410896.1 205311 D 323848 CDS YP_410897.1 82701331 3785870 206265..206576 1 NC_007614.1 hypothetical protein 206576 3785870 Nmul_A0197 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410897.1 206265 D 323848 CDS YP_410898.1 82701332 3785871 206881..207348 1 NC_007614.1 phosphohistidine phosphatase SixA 207348 3785871 Nmul_A0198 Nitrosospira multiformis ATCC 25196 phosphohistidine phosphatase SixA YP_410898.1 206881 D 323848 CDS YP_410899.1 82701333 3785872 complement(207403..207630) 1 NC_007614.1 hypothetical protein 207630 3785872 Nmul_A0199 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410899.1 207403 R 323848 CDS YP_410900.1 82701334 3785873 complement(207827..208342) 1 NC_007614.1 hypothetical protein 208342 3785873 Nmul_A0200 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410900.1 207827 R 323848 CDS YP_410901.1 82701335 3785874 208738..210636 1 NC_007614.1 K+ potassium transporter 210636 3785874 Nmul_A0201 Nitrosospira multiformis ATCC 25196 K+ potassium transporter YP_410901.1 208738 D 323848 CDS YP_410902.1 82701336 3785875 210885..214049 1 NC_007614.1 diguanylate cyclase/phosphodiesterase 214049 3785875 Nmul_A0202 Nitrosospira multiformis ATCC 25196 diguanylate cyclase/phosphodiesterase YP_410902.1 210885 D 323848 CDS YP_410903.1 82701337 3785876 214241..215470 1 NC_007614.1 nuclease SbcCD subunit D 215470 3785876 Nmul_A0203 Nitrosospira multiformis ATCC 25196 nuclease SbcCD subunit D YP_410903.1 214241 D 323848 CDS YP_410904.1 82701338 3785877 215482..218748 1 NC_007614.1 ATP-dependent dsDNA exonuclease (SbcC)-like 218748 3785877 Nmul_A0204 Nitrosospira multiformis ATCC 25196 ATP-dependent dsDNA exonuclease (SbcC)-like YP_410904.1 215482 D 323848 CDS YP_410905.1 82701339 3785879 219119..219676 1 NC_007614.1 cytochrome c, class I 219676 3785879 Nmul_A0205 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_410905.1 219119 D 323848 CDS YP_410906.1 82701340 3785880 219806..220633 1 NC_007614.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 220633 apaH 3785880 apaH Nitrosospira multiformis ATCC 25196 diadenosine tetraphosphatase YP_410906.1 219806 D 323848 CDS YP_410907.1 82701341 3785881 complement(220554..221231) 1 NC_007614.1 phospholipid/glycerol acyltransferase 221231 3785881 Nmul_A0207 Nitrosospira multiformis ATCC 25196 phospholipid/glycerol acyltransferase YP_410907.1 220554 R 323848 CDS YP_410908.1 82701342 3784585 complement(221481..221939) 1 NC_007614.1 surface antigen protein 221939 3784585 Nmul_A0208 Nitrosospira multiformis ATCC 25196 surface antigen protein YP_410908.1 221481 R 323848 CDS YP_410909.1 82701343 3784586 complement(221952..222887) 1 NC_007614.1 PfkB 222887 3784586 Nmul_A0209 Nitrosospira multiformis ATCC 25196 PfkB YP_410909.1 221952 R 323848 CDS YP_410910.1 82701344 3784587 complement(222914..224416) 1 NC_007614.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 224416 3784587 Nmul_A0210 Nitrosospira multiformis ATCC 25196 glycine dehydrogenase subunit 2 YP_410910.1 222914 R 323848 CDS YP_410911.1 82701345 3784588 complement(224579..225076) 1 NC_007614.1 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 225076 3784588 Nmul_A0211 Nitrosospira multiformis ATCC 25196 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_410911.1 224579 R 323848 CDS YP_410912.1 82701346 3784589 complement(225133..226491) 1 NC_007614.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 226491 3784589 Nmul_A0212 Nitrosospira multiformis ATCC 25196 glycine dehydrogenase subunit 1 YP_410912.1 225133 R 323848 CDS YP_410913.1 82701347 3784590 complement(226582..226971) 1 NC_007614.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 226971 3784590 Nmul_A0213 Nitrosospira multiformis ATCC 25196 glycine cleavage system protein H YP_410913.1 226582 R 323848 CDS YP_410914.1 82701348 3784591 complement(227013..228095) 1 NC_007614.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 228095 gcvT 3784591 gcvT Nitrosospira multiformis ATCC 25196 glycine cleavage system aminomethyltransferase T YP_410914.1 227013 R 323848 CDS YP_410915.1 82701349 3784592 228637..230349 1 NC_007614.1 ATPase 230349 3784592 Nmul_A0215 Nitrosospira multiformis ATCC 25196 ATPase YP_410915.1 228637 D 323848 CDS YP_410916.1 82701350 3784593 230469..231764 1 NC_007614.1 glutamate--cysteine ligase GshA 231764 3784593 Nmul_A0216 Nitrosospira multiformis ATCC 25196 glutamate--cysteine ligase GshA YP_410916.1 230469 D 323848 CDS YP_410917.1 82701351 3784594 232027..232977 1 NC_007614.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 232977 3784594 Nmul_A0217 Nitrosospira multiformis ATCC 25196 glutathione synthetase YP_410917.1 232027 D 323848 CDS YP_410918.1 82701352 3784595 233018..233410 1 NC_007614.1 PTS system fructose subfamily IIA component 233410 3784595 Nmul_A0218 Nitrosospira multiformis ATCC 25196 PTS system fructose subfamily IIA component YP_410918.1 233018 D 323848 CDS YP_410919.1 82701353 3784596 233414..233683 1 NC_007614.1 HPrNtr 233683 3784596 Nmul_A0219 Nitrosospira multiformis ATCC 25196 HPrNtr YP_410919.1 233414 D 323848 CDS YP_410920.1 82701354 3784597 233680..235407 1 NC_007614.1 phosphoenolpyruvate-protein phosphotransferase 235407 3784597 Nmul_A0220 Nitrosospira multiformis ATCC 25196 phosphoenolpyruvate-protein phosphotransferase YP_410920.1 233680 D 323848 CDS YP_410921.1 82701355 3784598 235602..236735 1 NC_007614.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 236735 metX 3784598 metX Nitrosospira multiformis ATCC 25196 homoserine O-acetyltransferase YP_410921.1 235602 D 323848 CDS YP_410922.1 82701356 3784599 236732..237352 1 NC_007614.1 methionine biosynthesis MetW 237352 3784599 Nmul_A0222 Nitrosospira multiformis ATCC 25196 methionine biosynthesis MetW YP_410922.1 236732 D 323848 CDS YP_410923.1 82701357 3784600 complement(237385..238770) 1 NC_007614.1 major facilitator transporter 238770 3784600 Nmul_A0223 Nitrosospira multiformis ATCC 25196 major facilitator transporter YP_410923.1 237385 R 323848 CDS YP_410924.1 82701358 3784601 complement(238833..239612) 1 NC_007614.1 exodeoxyribonuclease III 239612 3784601 Nmul_A0224 Nitrosospira multiformis ATCC 25196 exodeoxyribonuclease III YP_410924.1 238833 R 323848 CDS YP_410925.1 82701359 3784602 239636..240322 1 NC_007614.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 240322 pyrE 3784602 pyrE Nitrosospira multiformis ATCC 25196 orotate phosphoribosyltransferase YP_410925.1 239636 D 323848 CDS YP_410926.1 82701360 3784603 complement(240330..240803) 1 NC_007614.1 hypothetical protein 240803 3784603 Nmul_A0226 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410926.1 240330 R 323848 CDS YP_410927.1 82701361 3786309 241503..242099 1 NC_007614.1 similar to Nitrosospira sp. NpAV ORF4 in GenBank Accession Number U92432; hypothetical protein 242099 3786309 Nmul_A0227 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410927.1 241503 D 323848 CDS YP_410928.1 82701362 3786310 complement(242379..243566) 1 NC_007614.1 8-amino-7-oxononanoate synthase 243566 3786310 Nmul_A0228 Nitrosospira multiformis ATCC 25196 8-amino-7-oxononanoate synthase YP_410928.1 242379 R 323848 CDS YP_410929.1 82701363 3786311 complement(243563..243817) 1 NC_007614.1 phosphopantetheine-binding 243817 3786311 Nmul_A0229 Nitrosospira multiformis ATCC 25196 phosphopantetheine-binding YP_410929.1 243563 R 323848 CDS YP_410930.1 82701364 3786312 complement(243847..244761) 1 NC_007614.1 NAD-dependent epimerase/dehydratase 244761 3786312 Nmul_A0230 Nitrosospira multiformis ATCC 25196 NAD-dependent epimerase/dehydratase YP_410930.1 243847 R 323848 CDS YP_410931.1 82701365 3786313 complement(244769..246595) 1 NC_007614.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 246595 3786313 Nmul_A0231 Nitrosospira multiformis ATCC 25196 acyl-CoA synthetase YP_410931.1 244769 R 323848 CDS YP_410932.1 82701366 3786314 complement(247289..247633) 1 NC_007614.1 hypothetical protein 247633 3786314 Nmul_A0232 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410932.1 247289 R 323848 CDS YP_410933.1 82701367 3786315 complement(247736..248833) 1 NC_007614.1 Rieske (2Fe-2S) domain-containing protein 248833 3786315 Nmul_A0233 Nitrosospira multiformis ATCC 25196 Rieske (2Fe-2S) domain-containing protein YP_410933.1 247736 R 323848 CDS YP_410934.1 82701368 3786316 249074..249328 1 NC_007614.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 249328 3786316 Nmul_A0234 Nitrosospira multiformis ATCC 25196 exodeoxyribonuclease VII small subunit YP_410934.1 249074 D 323848 CDS YP_410935.1 82701369 3786317 249318..250211 1 NC_007614.1 polyprenyl synthetase 250211 3786317 Nmul_A0235 Nitrosospira multiformis ATCC 25196 polyprenyl synthetase YP_410935.1 249318 D 323848 CDS YP_410936.1 82701370 3786318 250271..252115 1 NC_007614.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 252115 3786318 Nmul_A0236 Nitrosospira multiformis ATCC 25196 1-deoxy-D-xylulose-5-phosphate synthase YP_410936.1 250271 D 323848 CDS YP_410937.1 82701371 3786319 252177..252968 1 NC_007614.1 hypothetical protein 252968 3786319 Nmul_A0237 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410937.1 252177 D 323848 CDS YP_410938.1 82701372 3786323 254443..255246 1 NC_007614.1 LuxR family transcriptional regulator 255246 3786323 Nmul_A0238 Nitrosospira multiformis ATCC 25196 LuxR family transcriptional regulator YP_410938.1 254443 D 323848 CDS YP_410939.1 82701373 3785725 255239..256657 1 NC_007614.1 sugar transferase 256657 3785725 Nmul_A0239 Nitrosospira multiformis ATCC 25196 sugar transferase YP_410939.1 255239 D 323848 CDS YP_410940.1 82701374 3785726 256863..258104 1 NC_007614.1 hypothetical protein 258104 3785726 Nmul_A0240 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410940.1 256863 D 323848 CDS YP_410941.1 82701375 3785727 258346..259338 1 NC_007614.1 hypothetical protein 259338 3785727 Nmul_A0241 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410941.1 258346 D 323848 CDS YP_410942.1 82701376 3785728 259367..260161 1 NC_007614.1 polysaccharide export protein 260161 3785728 Nmul_A0242 Nitrosospira multiformis ATCC 25196 polysaccharide export protein YP_410942.1 259367 D 323848 CDS YP_410943.1 82701377 3785729 260176..261567 1 NC_007614.1 lipopolysaccharide biosynthesis protein 261567 3785729 Nmul_A0243 Nitrosospira multiformis ATCC 25196 lipopolysaccharide biosynthesis protein YP_410943.1 260176 D 323848 CDS YP_410944.1 82701378 3785730 261588..262517 1 NC_007614.1 protein-tyrosine kinase 262517 3785730 Nmul_A0244 Nitrosospira multiformis ATCC 25196 protein-tyrosine kinase YP_410944.1 261588 D 323848 CDS YP_410945.1 82701379 3785731 complement(262694..263026) 1 NC_007614.1 hypothetical protein 263026 3785731 Nmul_A0245 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410945.1 262694 R 323848 CDS YP_410946.1 82701380 3785732 263073..263987 1 NC_007614.1 hypothetical protein 263987 3785732 Nmul_A0246 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410946.1 263073 D 323848 CDS YP_410947.1 82701381 3785733 263984..264667 1 NC_007614.1 hypothetical protein 264667 3785733 Nmul_A0247 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410947.1 263984 D 323848 CDS YP_410948.1 82701382 3785734 264728..266191 1 NC_007614.1 hypothetical protein 266191 3785734 Nmul_A0248 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410948.1 264728 D 323848 CDS YP_410949.1 82701383 3785735 266239..267717 1 NC_007614.1 O-antigen polymerase 267717 3785735 Nmul_A0249 Nitrosospira multiformis ATCC 25196 O-antigen polymerase YP_410949.1 266239 D 323848 CDS YP_410950.1 82701384 3785736 267714..268838 1 NC_007614.1 group 1 glycosyl transferase 268838 3785736 Nmul_A0250 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_410950.1 267714 D 323848 CDS YP_410951.1 82701385 3785737 269102..271420 1 NC_007614.1 heparinase II/III-like protein 271420 3785737 Nmul_A0251 Nitrosospira multiformis ATCC 25196 heparinase II/III-like protein YP_410951.1 269102 D 323848 CDS YP_410952.1 82701386 3785738 271673..272494 1 NC_007614.1 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like 272494 3785738 Nmul_A0252 Nitrosospira multiformis ATCC 25196 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like YP_410952.1 271673 D 323848 CDS YP_410953.1 82701387 3785739 273034..274110 1 NC_007614.1 group 1 glycosyl transferase 274110 3785739 Nmul_A0253 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_410953.1 273034 D 323848 CDS YP_410954.1 82701388 3785740 274497..275330 1 NC_007614.1 methyltransferase FkbM 275330 3785740 Nmul_A0254 Nitrosospira multiformis ATCC 25196 methyltransferase FkbM YP_410954.1 274497 D 323848 CDS YP_410955.1 82701389 3785741 275475..276497 1 NC_007614.1 hypothetical protein 276497 3785741 Nmul_A0255 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410955.1 275475 D 323848 CDS YP_410956.1 82701390 3785742 276520..277626 1 NC_007614.1 oxidoreductase-like protein 277626 3785742 Nmul_A0256 Nitrosospira multiformis ATCC 25196 oxidoreductase-like protein YP_410956.1 276520 D 323848 CDS YP_410957.1 82701391 3785743 277657..278523 1 NC_007614.1 hypothetical protein 278523 3785743 Nmul_A0257 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410957.1 277657 D 323848 CDS YP_410958.1 82701392 3785176 278542..279675 1 NC_007614.1 hypothetical protein 279675 3785176 Nmul_A0258 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410958.1 278542 D 323848 CDS YP_410959.1 82701393 3785177 279672..280787 1 NC_007614.1 UDP-N-acetylglucosamine 2-epimerase 280787 3785177 Nmul_A0259 Nitrosospira multiformis ATCC 25196 UDP-N-acetylglucosamine 2-epimerase YP_410959.1 279672 D 323848 CDS YP_410960.1 82701394 3785178 281091..282152 1 NC_007614.1 UDP-glucose 4-epimerase 282152 3785178 Nmul_A0260 Nitrosospira multiformis ATCC 25196 UDP-glucose 4-epimerase YP_410960.1 281091 D 323848 CDS YP_410961.1 82701395 3785179 282254..283699 1 NC_007614.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 283699 3785179 Nmul_A0261 Nitrosospira multiformis ATCC 25196 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_410961.1 282254 D 323848 CDS YP_410962.1 82701396 3785180 283861..284481 1 NC_007614.1 hypothetical protein 284481 3785180 Nmul_A0262 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410962.1 283861 D 323848 CDS YP_410963.1 82701397 3785182 285301..286032 1 NC_007614.1 pseudouridine synthase Rsu 286032 3785182 Nmul_A0263 Nitrosospira multiformis ATCC 25196 pseudouridine synthase Rsu YP_410963.1 285301 D 323848 CDS YP_410964.1 82701398 3785183 286146..287207 1 NC_007614.1 dTDP-glucose 4,6-dehydratase 287207 3785183 Nmul_A0264 Nitrosospira multiformis ATCC 25196 dTDP-glucose 4,6-dehydratase YP_410964.1 286146 D 323848 CDS YP_410965.1 82701399 3785184 287207..288109 1 NC_007614.1 dTDP-4-dehydrorhamnose reductase 288109 3785184 Nmul_A0265 Nitrosospira multiformis ATCC 25196 dTDP-4-dehydrorhamnose reductase YP_410965.1 287207 D 323848 CDS YP_410966.1 82701400 3785185 288106..288993 1 NC_007614.1 glucose-1-phosphate thymidylyltransferase 288993 3785185 Nmul_A0266 Nitrosospira multiformis ATCC 25196 glucose-1-phosphate thymidylyltransferase YP_410966.1 288106 D 323848 CDS YP_410967.1 82701401 3785186 288990..289541 1 NC_007614.1 dTDP-4-dehydrorhamnose 3,5-epimerase 289541 3785186 Nmul_A0267 Nitrosospira multiformis ATCC 25196 dTDP-4-dehydrorhamnose 3,5-epimerase YP_410967.1 288990 D 323848 CDS YP_410968.1 82701402 3785187 289580..290752 1 NC_007614.1 Fatty acid desaturase 290752 3785187 Nmul_A0268 Nitrosospira multiformis ATCC 25196 Fatty acid desaturase YP_410968.1 289580 D 323848 CDS YP_410969.1 82701403 3785188 complement(290758..291105) 1 NC_007614.1 hypothetical protein 291105 3785188 Nmul_A0269 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410969.1 290758 R 323848 CDS YP_410970.1 82701404 3785189 291260..292534 1 NC_007614.1 UDP-glucose/GDP-mannose dehydrogenase 292534 3785189 Nmul_A0270 Nitrosospira multiformis ATCC 25196 UDP-glucose/GDP-mannose dehydrogenase YP_410970.1 291260 D 323848 CDS YP_410971.1 82701405 3785190 292552..293604 1 NC_007614.1 NAD-dependent epimerase/dehydratase 293604 3785190 Nmul_A0271 Nitrosospira multiformis ATCC 25196 NAD-dependent epimerase/dehydratase YP_410971.1 292552 D 323848 CDS YP_410972.1 82701406 3785191 complement(293649..294263) 1 NC_007614.1 hypothetical protein 294263 3785191 Nmul_A0272 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410972.1 293649 R 323848 CDS YP_410973.1 82701407 3785192 complement(294505..295383) 1 NC_007614.1 esterase/lipase/thioesterase family protein 295383 3785192 Nmul_A0273 Nitrosospira multiformis ATCC 25196 esterase/lipase/thioesterase family protein YP_410973.1 294505 R 323848 CDS YP_410974.1 82701408 3785193 complement(295380..296231) 1 NC_007614.1 esterase/lipase/thioesterase family protein 296231 3785193 Nmul_A0274 Nitrosospira multiformis ATCC 25196 esterase/lipase/thioesterase family protein YP_410974.1 295380 R 323848 CDS YP_410975.1 82701409 3785194 complement(296228..296479) 1 NC_007614.1 hypothetical protein 296479 3785194 Nmul_A0275 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410975.1 296228 R 323848 CDS YP_410976.1 82701410 3785522 296883..298358 1 NC_007614.1 hypothetical protein 298358 3785522 Nmul_A0276 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410976.1 296883 D 323848 CDS YP_410977.1 82701411 3785523 298881..300002 1 NC_007614.1 dolichyl-phosphate beta-D-mannosyltransferase 300002 3785523 Nmul_A0277 Nitrosospira multiformis ATCC 25196 dolichyl-phosphate beta-D-mannosyltransferase YP_410977.1 298881 D 323848 CDS YP_410978.1 82701412 3785524 300168..301526 1 NC_007614.1 glycosyl transferase family protein 301526 3785524 Nmul_A0278 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_410978.1 300168 D 323848 CDS YP_410979.1 82701413 3785525 301733..302683 1 NC_007614.1 glycosyl transferase family protein 302683 3785525 Nmul_A0279 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_410979.1 301733 D 323848 CDS YP_410980.1 82701414 3785526 302781..303497 1 NC_007614.1 hypothetical protein 303497 3785526 Nmul_A0280 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410980.1 302781 D 323848 CDS YP_410981.1 82701415 3785527 303549..303974 1 NC_007614.1 hypothetical protein 303974 3785527 Nmul_A0281 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410981.1 303549 D 323848 CDS YP_410982.1 82701416 3785528 303990..305768 1 NC_007614.1 FkbH domain-containing protein 305768 3785528 Nmul_A0282 Nitrosospira multiformis ATCC 25196 FkbH domain-containing protein YP_410982.1 303990 D 323848 CDS YP_410983.1 82701417 3785529 305777..306013 1 NC_007614.1 acyl carrier protein, ACP 306013 3785529 Nmul_A0283 Nitrosospira multiformis ATCC 25196 acyl carrier protein, ACP YP_410983.1 305777 D 323848 CDS YP_410984.1 82701418 3785530 306010..306690 1 NC_007614.1 hexapaptide repeat-containing transferase 306690 3785530 Nmul_A0284 Nitrosospira multiformis ATCC 25196 hexapaptide repeat-containing transferase YP_410984.1 306010 D 323848 CDS YP_410985.1 82701419 3785531 306703..307431 1 NC_007614.1 hypothetical protein 307431 3785531 Nmul_A0285 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410985.1 306703 D 323848 CDS YP_410986.1 82701420 3785532 307428..307793 1 NC_007614.1 hypothetical protein 307793 3785532 Nmul_A0286 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410986.1 307428 D 323848 CDS YP_410987.1 82701421 3785533 307790..308668 1 NC_007614.1 generic methyltransferase 308668 3785533 Nmul_A0287 Nitrosospira multiformis ATCC 25196 generic methyltransferase YP_410987.1 307790 D 323848 CDS YP_410988.1 82701422 3785534 308676..309800 1 NC_007614.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 309800 3785534 Nmul_A0288 Nitrosospira multiformis ATCC 25196 TDP-4-oxo-6-deoxy-D-glucose transaminase YP_410988.1 308676 D 323848 CDS YP_410989.1 82701423 3785535 309931..311148 1 NC_007614.1 group 1 glycosyl transferase 311148 3785535 Nmul_A0289 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_410989.1 309931 D 323848 CDS YP_410990.1 82701424 3785536 311145..312257 1 NC_007614.1 group 1 glycosyl transferase 312257 3785536 Nmul_A0290 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_410990.1 311145 D 323848 CDS YP_410991.1 82701425 3785537 312280..313641 1 NC_007614.1 capsular polysaccharide biosynthesis protein CapK 313641 3785537 Nmul_A0291 Nitrosospira multiformis ATCC 25196 capsular polysaccharide biosynthesis protein CapK YP_410991.1 312280 D 323848 CDS YP_410992.1 82701426 3785538 313774..315273 1 NC_007614.1 polysaccharide biosynthesis protein 315273 3785538 Nmul_A0292 Nitrosospira multiformis ATCC 25196 polysaccharide biosynthesis protein YP_410992.1 313774 D 323848 CDS YP_410993.1 82701427 3785539 complement(315317..317155) 1 NC_007614.1 hypothetical protein 317155 3785539 Nmul_A0293 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410993.1 315317 R 323848 CDS YP_410994.1 82701428 3785540 complement(317268..318161) 1 NC_007614.1 hypothetical protein 318161 3785540 Nmul_A0294 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410994.1 317268 R 323848 CDS YP_410995.1 82701429 3785328 complement(318201..319094) 1 NC_007614.1 methyltransferase FkbM 319094 3785328 Nmul_A0295 Nitrosospira multiformis ATCC 25196 methyltransferase FkbM YP_410995.1 318201 R 323848 CDS YP_410996.1 82701430 3785329 complement(319145..320185) 1 NC_007614.1 group 1 glycosyl transferase 320185 3785329 Nmul_A0296 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_410996.1 319145 R 323848 CDS YP_410997.1 82701431 3785330 320636..321577 1 NC_007614.1 glycosyl transferase family protein 321577 3785330 Nmul_A0297 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_410997.1 320636 D 323848 CDS YP_410998.1 82701432 3785331 complement(321581..322600) 1 NC_007614.1 hypothetical protein 322600 3785331 Nmul_A0298 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_410998.1 321581 R 323848 CDS YP_410999.1 82701433 3785332 323093..323770 1 NC_007614.1 adenylylsulfate kinase 323770 3785332 Nmul_A0299 Nitrosospira multiformis ATCC 25196 adenylylsulfate kinase YP_410999.1 323093 D 323848 CDS YP_411000.1 82701434 3785333 323864..325204 1 NC_007614.1 O-antigen polymerase 325204 3785333 Nmul_A0300 Nitrosospira multiformis ATCC 25196 O-antigen polymerase YP_411000.1 323864 D 323848 CDS YP_411001.1 82701435 3785334 325227..326288 1 NC_007614.1 polysaccharide deacetylase 326288 3785334 Nmul_A0301 Nitrosospira multiformis ATCC 25196 polysaccharide deacetylase YP_411001.1 325227 D 323848 CDS YP_411002.1 82701436 3785335 326391..326909 1 NC_007614.1 possibly involved in tellurite resistance; hypothetical protein 326909 3785335 Nmul_A0302 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411002.1 326391 D 323848 CDS YP_411003.1 82701437 3785336 327488..327880 1 NC_007614.1 ATP synthase protein I 327880 3785336 Nmul_A0303 Nitrosospira multiformis ATCC 25196 ATP synthase protein I YP_411003.1 327488 D 323848 CDS YP_411004.1 82701438 3785337 327902..328708 1 NC_007614.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 328708 3785337 Nmul_A0304 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit A YP_411004.1 327902 D 323848 CDS YP_411005.1 82701439 3785338 328762..329034 1 NC_007614.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 329034 3785338 Nmul_A0305 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit C YP_411005.1 328762 D 323848 CDS YP_411006.1 82701440 3785339 329072..329542 1 NC_007614.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 329542 3785339 Nmul_A0306 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit B YP_411006.1 329072 D 323848 CDS YP_411007.1 82701441 3785340 329546..330082 1 NC_007614.1 ATP synthase F1 subunit delta 330082 3785340 Nmul_A0307 Nitrosospira multiformis ATCC 25196 ATP synthase F1 subunit delta YP_411007.1 329546 D 323848 CDS YP_411008.1 82701442 3785341 330098..331639 1 NC_007614.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 331639 3785341 Nmul_A0308 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit alpha YP_411008.1 330098 D 323848 CDS YP_411009.1 82701443 3785342 331643..332524 1 NC_007614.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 332524 3785342 Nmul_A0309 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit gamma YP_411009.1 331643 D 323848 CDS YP_411010.1 82701444 3785343 332555..333934 1 NC_007614.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 333934 3785343 Nmul_A0310 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit beta YP_411010.1 332555 D 323848 CDS YP_411011.1 82701445 3785344 334001..334420 1 NC_007614.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 334420 atpC 3785344 atpC Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit epsilon YP_411011.1 334001 D 323848 CDS YP_411012.1 82701446 3785345 334820..336208 1 NC_007614.1 UDP-N-acetylglucosamine pyrophosphorylase 336208 3785345 Nmul_A0312 Nitrosospira multiformis ATCC 25196 UDP-N-acetylglucosamine pyrophosphorylase YP_411012.1 334820 D 323848 CDS YP_411013.1 82701447 3785346 336279..338126 1 NC_007614.1 glucosamine--fructose-6-phosphate aminotransferase 338126 3785346 Nmul_A0313 Nitrosospira multiformis ATCC 25196 glucosamine--fructose-6-phosphate aminotransferase YP_411013.1 336279 D 323848 CDS YP_411014.1 82701448 3785347 complement(338215..339156) 1 NC_007614.1 hypothetical protein 339156 3785347 Nmul_A0314 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411014.1 338215 R 323848 CDS YP_411015.1 82701449 3783992 complement(339350..340534) 1 NC_007614.1 rare lipoprotein A 340534 3783992 Nmul_A0315 Nitrosospira multiformis ATCC 25196 rare lipoprotein A YP_411015.1 339350 R 323848 CDS YP_411016.1 82701450 3783993 complement(340540..341640) 1 NC_007614.1 rod shape-determining protein RodA 341640 3783993 Nmul_A0316 Nitrosospira multiformis ATCC 25196 rod shape-determining protein RodA YP_411016.1 340540 R 323848 CDS YP_411017.1 82701451 3783994 complement(341633..343573) 1 NC_007614.1 peptidoglycan glycosyltransferase 343573 3783994 Nmul_A0317 Nitrosospira multiformis ATCC 25196 peptidoglycan glycosyltransferase YP_411017.1 341633 R 323848 CDS YP_411018.1 82701452 3783995 complement(343570..344091) 1 NC_007614.1 rod shape-determining protein MreD 344091 3783995 Nmul_A0318 Nitrosospira multiformis ATCC 25196 rod shape-determining protein MreD YP_411018.1 343570 R 323848 CDS YP_411019.1 82701453 3783996 complement(344088..344984) 1 NC_007614.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 344984 3783996 Nmul_A0319 Nitrosospira multiformis ATCC 25196 rod shape-determining protein MreC YP_411019.1 344088 R 323848 CDS YP_411020.1 82701454 3783997 complement(345081..346139) 1 NC_007614.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 346139 3783997 Nmul_A0320 Nitrosospira multiformis ATCC 25196 rod shape-determining protein MreB YP_411020.1 345081 R 323848 CDS YP_411021.1 82701455 3783998 346251..346538 1 NC_007614.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 346538 gatC 3783998 gatC Nitrosospira multiformis ATCC 25196 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_411021.1 346251 D 323848 CDS YP_411022.1 82701456 3783999 346621..348114 1 NC_007614.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 348114 gatA 3783999 gatA Nitrosospira multiformis ATCC 25196 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_411022.1 346621 D 323848 CDS YP_411023.1 82701457 3784000 348204..349694 1 NC_007614.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 349694 gatB 3784000 gatB Nitrosospira multiformis ATCC 25196 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_411023.1 348204 D 323848 CDS YP_411024.1 82701458 3784001 350540..350860 1 NC_007614.1 hypothetical protein 350860 3784001 Nmul_A0324 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411024.1 350540 D 323848 CDS YP_411025.1 82701459 3784002 351382..351768 1 NC_007614.1 helix-turn-helix protein, CopG 351768 3784002 Nmul_A0325 Nitrosospira multiformis ATCC 25196 helix-turn-helix protein, CopG YP_411025.1 351382 D 323848 CDS YP_411026.1 82701460 3784003 351752..352024 1 NC_007614.1 plasmid stabilization system protein 352024 3784003 Nmul_A0326 Nitrosospira multiformis ATCC 25196 plasmid stabilization system protein YP_411026.1 351752 D 323848 CDS YP_411027.1 82701461 3784004 complement(352039..353379) 1 NC_007614.1 peptide methionine sulfoxide reductase 353379 3784004 Nmul_A0327 Nitrosospira multiformis ATCC 25196 peptide methionine sulfoxide reductase YP_411027.1 352039 R 323848 CDS YP_411028.1 82701462 3784005 complement(353681..356536) 1 NC_007614.1 diguanylate cyclase/phosphodiesterase 356536 3784005 Nmul_A0328 Nitrosospira multiformis ATCC 25196 diguanylate cyclase/phosphodiesterase YP_411028.1 353681 R 323848 CDS YP_411029.1 82701463 3784006 357089..357565 1 NC_007614.1 CheW protein 357565 3784006 Nmul_A0329 Nitrosospira multiformis ATCC 25196 CheW protein YP_411029.1 357089 D 323848 CDS YP_411030.1 82701464 3784007 357569..359053 1 NC_007614.1 MCP methyltransferase, CheR-type 359053 3784007 Nmul_A0330 Nitrosospira multiformis ATCC 25196 MCP methyltransferase, CheR-type YP_411030.1 357569 D 323848 CDS YP_411031.1 82701465 3784008 359098..359700 1 NC_007614.1 CheW protein 359700 3784008 Nmul_A0331 Nitrosospira multiformis ATCC 25196 CheW protein YP_411031.1 359098 D 323848 CDS YP_411032.1 82701466 3784009 359760..361253 1 NC_007614.1 methyl-accepting chemotaxis sensory transducer 361253 3784009 Nmul_A0332 Nitrosospira multiformis ATCC 25196 methyl-accepting chemotaxis sensory transducer YP_411032.1 359760 D 323848 CDS YP_411033.1 82701467 3784010 361246..363600 1 NC_007614.1 CheA signal transduction histidine kinase 363600 3784010 Nmul_A0333 Nitrosospira multiformis ATCC 25196 CheA signal transduction histidine kinase YP_411033.1 361246 D 323848 CDS YP_411034.1 82701468 3785959 363611..364678 1 NC_007614.1 response regulator receiver (CheY-like) modulated CheB methylesterase 364678 3785959 Nmul_A0334 Nitrosospira multiformis ATCC 25196 response regulator receiver (CheY-like) modulated CheB methylesterase YP_411034.1 363611 D 323848 CDS YP_411035.1 82701469 3785960 364668..367610 1 NC_007614.1 response regulator receiver/GGDEF/EAL domain-containing protein 367610 3785960 Nmul_A0335 Nitrosospira multiformis ATCC 25196 response regulator receiver/GGDEF/EAL domain-containing protein YP_411035.1 364668 D 323848 CDS YP_411036.1 82701470 3785961 complement(367955..368695) 1 NC_007614.1 Involved in pteridine salvage and antifolate resistance; pteridine reductase 368695 3785961 Nmul_A0336 Nitrosospira multiformis ATCC 25196 pteridine reductase YP_411036.1 367955 R 323848 CDS YP_411037.1 82701471 3785962 368771..370045 1 NC_007614.1 hypothetical protein 370045 3785962 Nmul_A0337 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411037.1 368771 D 323848 CDS YP_411038.1 82701472 3785963 370170..370613 1 NC_007614.1 signal-transduction protein 370613 3785963 Nmul_A0338 Nitrosospira multiformis ATCC 25196 signal-transduction protein YP_411038.1 370170 D 323848 CDS YP_411039.1 82701473 3785964 370876..372258 1 NC_007614.1 hypothetical protein 372258 3785964 Nmul_A0339 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411039.1 370876 D 323848 CDS YP_411040.1 82701474 3785965 complement(372407..373327) 1 NC_007614.1 pyridoxal-5'-phosphate-dependent enzyme subunit beta 373327 3785965 Nmul_A0340 Nitrosospira multiformis ATCC 25196 pyridoxal-5'-phosphate-dependent enzyme subunit beta YP_411040.1 372407 R 323848 CDS YP_411041.1 82701475 3785966 373527..374207 1 NC_007614.1 putative ubiquinone biosynthesis protein 374207 3785966 Nmul_A0341 Nitrosospira multiformis ATCC 25196 putative ubiquinone biosynthesis protein YP_411041.1 373527 D 323848 CDS YP_411042.1 82701476 3785967 complement(374252..374668) 1 NC_007614.1 OsmC-like protein 374668 3785967 Nmul_A0342 Nitrosospira multiformis ATCC 25196 OsmC-like protein YP_411042.1 374252 R 323848 CDS YP_411043.1 82701477 3785968 complement(374738..375493) 1 NC_007614.1 hypothetical protein 375493 3785968 Nmul_A0343 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411043.1 374738 R 323848 CDS YP_411044.1 82701478 3785969 complement(375569..375877) 1 NC_007614.1 cytochrome c, class I 375877 3785969 Nmul_A0344 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_411044.1 375569 R 323848 CDS YP_411045.1 82701479 3785970 complement(375899..378001) 1 NC_007614.1 hypothetical protein 378001 3785970 Nmul_A0345 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411045.1 375899 R 323848 CDS YP_411046.1 82701480 3785971 complement(378025..379698) 1 NC_007614.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 379698 3785971 Nmul_A0346 Nitrosospira multiformis ATCC 25196 dihydroxy-acid dehydratase YP_411046.1 378025 R 323848 CDS YP_411047.1 82701481 3785972 379714..379965 1 NC_007614.1 hypothetical protein 379965 3785972 Nmul_A0347 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411047.1 379714 D 323848 CDS YP_411048.1 82701482 3785973 380014..380883 1 NC_007614.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 380883 3785973 Nmul_A0348 Nitrosospira multiformis ATCC 25196 prolipoprotein diacylglyceryl transferase YP_411048.1 380014 D 323848 CDS YP_411049.1 82701483 3785974 380894..381493 1 NC_007614.1 UbiE/COQ5 methyltransferase 381493 3785974 Nmul_A0349 Nitrosospira multiformis ATCC 25196 UbiE/COQ5 methyltransferase YP_411049.1 380894 D 323848 CDS YP_411050.1 82701484 3785975 381569..382261 1 NC_007614.1 cyclase/dehydrase 382261 3785975 Nmul_A0350 Nitrosospira multiformis ATCC 25196 cyclase/dehydrase YP_411050.1 381569 D 323848 CDS YP_411051.1 82701485 3785976 382325..382657 1 NC_007614.1 hypothetical protein 382657 3785976 Nmul_A0351 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411051.1 382325 D 323848 CDS YP_411052.1 82701486 3785977 382889..383242 1 NC_007614.1 putative outer membrane lipoprotein 383242 3785977 Nmul_A0352 Nitrosospira multiformis ATCC 25196 putative outer membrane lipoprotein YP_411052.1 382889 D 323848 CDS YP_411053.1 82701487 3785978 383307..383675 1 NC_007614.1 putative thiol-disulfide oxidoreductase DCC 383675 3785978 Nmul_A0353 Nitrosospira multiformis ATCC 25196 putative thiol-disulfide oxidoreductase DCC YP_411053.1 383307 D 323848 CDS YP_411054.1 82701488 3784546 complement(383760..384803) 1 NC_007614.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 384803 3784546 Nmul_A0354 Nitrosospira multiformis ATCC 25196 dihydroorotase YP_411054.1 383760 R 323848 CDS YP_411055.1 82701489 3784547 complement(384991..386169) 1 NC_007614.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 386169 3784547 Nmul_A0355 Nitrosospira multiformis ATCC 25196 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_411055.1 384991 R 323848 CDS YP_411056.1 82701490 3784548 386511..387167 1 NC_007614.1 hypothetical protein 387167 3784548 Nmul_A0356 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411056.1 386511 D 323848 CDS YP_411057.1 82701491 3784549 387357..388223 1 NC_007614.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 388223 3784549 Nmul_A0357 Nitrosospira multiformis ATCC 25196 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_411057.1 387357 D 323848 CDS YP_411058.1 82701492 3784550 388273..390942 1 NC_007614.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 390942 aceE 3784550 aceE Nitrosospira multiformis ATCC 25196 pyruvate dehydrogenase subunit E1 YP_411058.1 388273 D 323848 CDS YP_411059.1 82701493 3784551 391164..392516 1 NC_007614.1 branched-chain alpha-keto acid dehydrogenase subunit E2 392516 3784551 Nmul_A0359 Nitrosospira multiformis ATCC 25196 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_411059.1 391164 D 323848 CDS YP_411060.1 82701494 3784552 392621..393301 1 NC_007614.1 nicotinate-nucleotide adenylyltransferase 393301 3784552 Nmul_A0360 Nitrosospira multiformis ATCC 25196 nicotinate-nucleotide adenylyltransferase YP_411060.1 392621 D 323848 CDS YP_411061.1 82701495 3784553 393304..393780 1 NC_007614.1 Iojap-like protein 393780 3784553 Nmul_A0361 Nitrosospira multiformis ATCC 25196 Iojap-like protein YP_411061.1 393304 D 323848 CDS YP_411062.1 82701496 3784554 393886..394356 1 NC_007614.1 hypothetical protein 394356 3784554 Nmul_A0362 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411062.1 393886 D 323848 CDS YP_411063.1 82701497 3784555 394408..395031 1 NC_007614.1 maf protein 395031 3784555 Nmul_A0363 Nitrosospira multiformis ATCC 25196 maf protein YP_411063.1 394408 D 323848 CDS YP_411064.1 82701498 3784556 395056..396507 1 NC_007614.1 ribonuclease 396507 3784556 Nmul_A0364 Nitrosospira multiformis ATCC 25196 ribonuclease YP_411064.1 395056 D 323848 CDS YP_411065.1 82701499 3784557 complement(396500..397321) 1 NC_007614.1 hypothetical protein 397321 3784557 Nmul_A0365 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411065.1 396500 R 323848 CDS YP_411066.1 82701500 3784558 complement(397502..398263) 1 NC_007614.1 hypothetical protein 398263 3784558 Nmul_A0366 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411066.1 397502 R 323848 CDS YP_411067.1 82701501 3784559 398321..399055 1 NC_007614.1 ABC transporter-like protein 399055 3784559 Nmul_A0367 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_411067.1 398321 D 323848 CDS YP_411068.1 82701502 3784560 399083..400795 1 NC_007614.1 hypothetical protein 400795 3784560 Nmul_A0368 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411068.1 399083 D 323848 CDS YP_411069.1 82701503 3784561 complement(400827..402038) 1 NC_007614.1 hypothetical protein 402038 3784561 Nmul_A0369 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411069.1 400827 R 323848 CDS YP_411070.1 82701504 3784562 complement(402055..403284) 1 NC_007614.1 hypothetical protein 403284 3784562 Nmul_A0370 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411070.1 402055 R 323848 CDS YP_411071.1 82701505 3784563 403646..404857 1 NC_007614.1 UDP-glucoronosyl and UDP-glucosyltransferase family protein 404857 3784563 Nmul_A0371 Nitrosospira multiformis ATCC 25196 UDP-glucoronosyl and UDP-glucosyltransferase family protein YP_411071.1 403646 D 323848 CDS YP_411072.1 82701506 3784564 404913..405725 1 NC_007614.1 dehydrogenase catalytic domain-containing protein 405725 3784564 Nmul_A0372 Nitrosospira multiformis ATCC 25196 dehydrogenase catalytic domain-containing protein YP_411072.1 404913 D 323848 CDS YP_411073.1 82701507 3784068 complement(405870..406709) 1 NC_007614.1 hypothetical protein 406709 3784068 Nmul_A0373 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411073.1 405870 R 323848 CDS YP_411074.1 82701508 3784069 complement(407378..409432) 1 NC_007614.1 UBA/THIF-type NAD/FAD binding domain-containing protein 409432 3784069 Nmul_A0374 Nitrosospira multiformis ATCC 25196 UBA/THIF-type NAD/FAD binding domain-containing protein YP_411074.1 407378 R 323848 CDS YP_411075.1 82701509 3784070 complement(409595..410413) 1 NC_007614.1 long-chain N-acyl amino acid synthase 410413 3784070 Nmul_A0375 Nitrosospira multiformis ATCC 25196 long-chain N-acyl amino acid synthase YP_411075.1 409595 R 323848 CDS YP_411076.1 82701510 3784071 complement(410657..413446) 1 NC_007614.1 hypothetical protein 413446 3784071 Nmul_A0376 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411076.1 410657 R 323848 CDS YP_411077.1 82701511 3784072 complement(413951..414733) 1 NC_007614.1 inositol monophosphatase 414733 3784072 Nmul_A0377 Nitrosospira multiformis ATCC 25196 inositol monophosphatase YP_411077.1 413951 R 323848 CDS YP_411078.1 82701512 3784073 complement(414737..415294) 1 NC_007614.1 hypothetical protein 415294 3784073 Nmul_A0378 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411078.1 414737 R 323848 CDS YP_411079.1 82701513 3784074 415519..416286 1 NC_007614.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 416286 3784074 Nmul_A0379 Nitrosospira multiformis ATCC 25196 16S ribosomal RNA methyltransferase RsmE YP_411079.1 415519 D 323848 CDS YP_411080.1 82701514 3784075 416289..417617 1 NC_007614.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 417617 3784075 Nmul_A0380 Nitrosospira multiformis ATCC 25196 N-acetylglutamate synthase YP_411080.1 416289 D 323848 CDS YP_411081.1 82701515 3784076 417725..417997 1 NC_007614.1 hypothetical protein 417997 3784076 Nmul_A0381 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411081.1 417725 D 323848 CDS YP_411082.1 82701516 3784077 418052..420127 1 NC_007614.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 420127 3784077 Nmul_A0382 Nitrosospira multiformis ATCC 25196 polyphosphate kinase YP_411082.1 418052 D 323848 CDS YP_411083.1 82701517 3784078 420199..421758 1 NC_007614.1 adenylate cyclase 421758 3784078 Nmul_A0383 Nitrosospira multiformis ATCC 25196 adenylate cyclase YP_411083.1 420199 D 323848 CDS YP_411084.1 82701518 3784079 complement(421965..423029) 1 NC_007614.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 423029 3784079 Nmul_A0384 Nitrosospira multiformis ATCC 25196 fructose-1,6-bisphosphate aldolase YP_411084.1 421965 R 323848 CDS YP_411085.1 82701519 3784080 complement(423112..424566) 1 NC_007614.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 424566 3784080 Nmul_A0385 Nitrosospira multiformis ATCC 25196 pyruvate kinase YP_411085.1 423112 R 323848 CDS YP_411086.1 82701520 3784081 complement(424623..425810) 1 NC_007614.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 425810 pgk 3784081 pgk Nitrosospira multiformis ATCC 25196 phosphoglycerate kinase YP_411086.1 424623 R 323848 CDS YP_411087.1 82701521 3784082 complement(425941..426942) 1 NC_007614.1 glyceraldehyde-3-phosphate dehydrogenase, type I 426942 3784082 Nmul_A0387 Nitrosospira multiformis ATCC 25196 glyceraldehyde-3-phosphate dehydrogenase, type I YP_411087.1 425941 R 323848 CDS YP_411088.1 82701522 3784083 complement(427023..429038) 1 NC_007614.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 429038 3784083 Nmul_A0388 Nitrosospira multiformis ATCC 25196 transketolase YP_411088.1 427023 R 323848 CDS YP_411089.1 82701523 3784084 complement(429178..430476) 1 NC_007614.1 two component sigma-54 specific Fis family transcriptional regulator 430476 3784084 Nmul_A0389 Nitrosospira multiformis ATCC 25196 two component sigma-54 specific Fis family transcriptional regulator YP_411089.1 429178 R 323848 CDS YP_411090.1 82701524 3784085 complement(430486..432720) 1 NC_007614.1 multi-sensor signal transduction histidine kinase 432720 3784085 Nmul_A0390 Nitrosospira multiformis ATCC 25196 multi-sensor signal transduction histidine kinase YP_411090.1 430486 R 323848 CDS YP_411091.1 82701525 3784086 complement(432717..433334) 1 NC_007614.1 proline rich signal peptide protein 433334 3784086 Nmul_A0391 Nitrosospira multiformis ATCC 25196 proline rich signal peptide protein YP_411091.1 432717 R 323848 CDS YP_411092.1 82701526 3784087 complement(433312..434640) 1 NC_007614.1 sun protein 434640 3784087 Nmul_A0392 Nitrosospira multiformis ATCC 25196 sun protein YP_411092.1 433312 R 323848 CDS YP_411093.1 82701527 3785386 complement(434637..435575) 1 NC_007614.1 methionyl-tRNA formyltransferase 435575 3785386 Nmul_A0393 Nitrosospira multiformis ATCC 25196 methionyl-tRNA formyltransferase YP_411093.1 434637 R 323848 CDS YP_411094.1 82701528 3785387 complement(435780..436355) 1 NC_007614.1 peptide deformylase 436355 3785387 Nmul_A0394 Nitrosospira multiformis ATCC 25196 peptide deformylase YP_411094.1 435780 R 323848 CDS YP_411095.1 82701529 3785388 436563..437681 1 NC_007614.1 DNA processing protein DprA 437681 3785388 Nmul_A0395 Nitrosospira multiformis ATCC 25196 DNA processing protein DprA YP_411095.1 436563 D 323848 CDS YP_411096.1 82701530 3785389 437968..440508 1 NC_007614.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 440508 3785389 Nmul_A0396 Nitrosospira multiformis ATCC 25196 DNA topoisomerase III YP_411096.1 437968 D 323848 CDS YP_411097.1 82701531 3785390 complement(440619..440894) 1 NC_007614.1 phosphopantetheine-binding 440894 3785390 Nmul_A0397 Nitrosospira multiformis ATCC 25196 phosphopantetheine-binding YP_411097.1 440619 R 323848 CDS YP_411098.1 82701532 3785391 complement(440891..442111) 1 NC_007614.1 beta-ketoacyl synthase 442111 3785391 Nmul_A0398 Nitrosospira multiformis ATCC 25196 beta-ketoacyl synthase YP_411098.1 440891 R 323848 CDS YP_411099.1 82701533 3785392 complement(442298..442552) 1 NC_007614.1 hypothetical protein 442552 3785392 Nmul_A0399 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411099.1 442298 R 323848 CDS YP_411100.1 82701534 3785393 442879..444081 1 NC_007614.1 hypothetical protein 444081 3785393 Nmul_A0400 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411100.1 442879 D 323848 CDS YP_411101.1 82701535 3785394 444128..444976 1 NC_007614.1 hypothetical protein 444976 3785394 Nmul_A0401 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411101.1 444128 D 323848 CDS YP_411102.1 82701536 3785395 445010..446086 1 NC_007614.1 permease YjgP/YjgQ 446086 3785395 Nmul_A0402 Nitrosospira multiformis ATCC 25196 permease YjgP/YjgQ YP_411102.1 445010 D 323848 CDS YP_411103.1 82701537 3785396 446083..447147 1 NC_007614.1 permease YjgP/YjgQ 447147 3785396 Nmul_A0403 Nitrosospira multiformis ATCC 25196 permease YjgP/YjgQ YP_411103.1 446083 D 323848 CDS YP_411104.1 82701538 3785397 447274..448467 1 NC_007614.1 CDP-alcohol phosphatidyltransferase 448467 3785397 Nmul_A0404 Nitrosospira multiformis ATCC 25196 CDP-alcohol phosphatidyltransferase YP_411104.1 447274 D 323848 CDS YP_411105.1 82701539 3785398 448491..449480 1 NC_007614.1 diacylglycerol kinase catalytic subunit 449480 3785398 Nmul_A0405 Nitrosospira multiformis ATCC 25196 diacylglycerol kinase catalytic subunit YP_411105.1 448491 D 323848 CDS YP_411106.1 82701540 3785399 449477..450463 1 NC_007614.1 hypothetical protein 450463 3785399 Nmul_A0406 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411106.1 449477 D 323848 CDS YP_411107.1 82701541 3785400 complement(450563..451768) 1 NC_007614.1 phosphatase kdsC 451768 3785400 Nmul_A0407 Nitrosospira multiformis ATCC 25196 phosphatase kdsC YP_411107.1 450563 R 323848 CDS YP_411108.1 82701542 3785401 complement(451768..452646) 1 NC_007614.1 N-acylneuraminate-9-phosphate synthase 452646 3785401 Nmul_A0408 Nitrosospira multiformis ATCC 25196 N-acylneuraminate-9-phosphate synthase YP_411108.1 451768 R 323848 CDS YP_411109.1 82701543 3785402 complement(452773..454173) 1 NC_007614.1 hypothetical protein 454173 3785402 Nmul_A0409 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411109.1 452773 R 323848 CDS YP_411110.1 82701544 3785403 454822..455538 1 NC_007614.1 acylneuraminate cytidylyltransferase 455538 3785403 Nmul_A0410 Nitrosospira multiformis ATCC 25196 acylneuraminate cytidylyltransferase YP_411110.1 454822 D 323848 CDS YP_411111.1 82701545 3785404 455535..456521 1 NC_007614.1 oxidoreductase-like protein 456521 3785404 Nmul_A0411 Nitrosospira multiformis ATCC 25196 oxidoreductase-like protein YP_411111.1 455535 D 323848 CDS YP_411112.1 82701546 3784162 456518..457354 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 457354 3784162 Nmul_A0412 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_411112.1 456518 D 323848 CDS YP_411113.1 82701547 3784163 complement(457510..458619) 1 NC_007614.1 hypothetical protein 458619 3784163 Nmul_A0413 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411113.1 457510 R 323848 CDS YP_411114.1 82701548 3784164 complement(458663..460564) 1 NC_007614.1 glycosyl transferase family protein 460564 3784164 Nmul_A0414 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_411114.1 458663 R 323848 CDS YP_411115.1 82701549 3784165 complement(460682..462001) 1 NC_007614.1 hypothetical protein 462001 3784165 Nmul_A0415 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411115.1 460682 R 323848 CDS YP_411116.1 82701550 3784166 462317..463270 1 NC_007614.1 hypothetical protein 463270 3784166 Nmul_A0416 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411116.1 462317 D 323848 CDS YP_411117.1 82701551 3784167 463465..464769 1 NC_007614.1 hypothetical protein 464769 3784167 Nmul_A0417 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411117.1 463465 D 323848 CDS YP_411118.1 82701552 3784168 464976..466271 1 NC_007614.1 O-antigen polymerase 466271 3784168 Nmul_A0418 Nitrosospira multiformis ATCC 25196 O-antigen polymerase YP_411118.1 464976 D 323848 CDS YP_411119.1 82701553 3784169 complement(466415..466762) 1 NC_007614.1 transposase IS4 466762 3784169 Nmul_A0419 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_411119.1 466415 R 323848 CDS YP_411120.1 82701554 3784170 complement(466804..467172) 1 NC_007614.1 transposase 467172 3784170 Nmul_A0420 Nitrosospira multiformis ATCC 25196 transposase YP_411120.1 466804 R 323848 CDS YP_411121.1 82701555 3784171 complement(467209..469119) 1 NC_007614.1 glycosyl transferase family protein 469119 3784171 Nmul_A0421 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_411121.1 467209 R 323848 CDS YP_411122.1 82701556 3784172 complement(469345..470058) 1 NC_007614.1 phosphoglycerate mutase 1 family protein 470058 3784172 Nmul_A0422 Nitrosospira multiformis ATCC 25196 phosphoglycerate mutase 1 family protein YP_411122.1 469345 R 323848 CDS YP_411123.1 82701557 3784173 complement(470328..470786) 1 NC_007614.1 hypothetical protein 470786 3784173 Nmul_A0423 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411123.1 470328 R 323848 CDS YP_411124.1 82701558 3784174 471181..472503 1 NC_007614.1 hypothetical protein 472503 3784174 Nmul_A0424 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411124.1 471181 D 323848 CDS YP_411125.1 82701559 3784175 complement(472500..473285) 1 NC_007614.1 nucleotidyl transferase 473285 3784175 Nmul_A0425 Nitrosospira multiformis ATCC 25196 nucleotidyl transferase YP_411125.1 472500 R 323848 CDS YP_411126.1 82701560 3784176 complement(473408..474049) 1 NC_007614.1 haloacid dehalogenase-like hydrolase 474049 3784176 Nmul_A0426 Nitrosospira multiformis ATCC 25196 haloacid dehalogenase-like hydrolase YP_411126.1 473408 R 323848 CDS YP_411127.1 82701561 3784177 complement(474046..474975) 1 NC_007614.1 NAD-dependent epimerase/dehydratase 474975 3784177 Nmul_A0427 Nitrosospira multiformis ATCC 25196 NAD-dependent epimerase/dehydratase YP_411127.1 474046 R 323848 CDS YP_411128.1 82701562 3784178 complement(474984..475931) 1 NC_007614.1 D-isomer specific 2-hydroxyacid dehydrogenase 475931 3784178 Nmul_A0428 Nitrosospira multiformis ATCC 25196 D-isomer specific 2-hydroxyacid dehydrogenase YP_411128.1 474984 R 323848 CDS YP_411129.1 82701563 3784179 complement(475928..476689) 1 NC_007614.1 2-dehydro-3-deoxyglucarate aldolase 476689 3784179 Nmul_A0429 Nitrosospira multiformis ATCC 25196 2-dehydro-3-deoxyglucarate aldolase YP_411129.1 475928 R 323848 CDS YP_411130.1 82701564 3784180 complement(476740..477507) 1 NC_007614.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 477507 3784180 Nmul_A0430 Nitrosospira multiformis ATCC 25196 3-deoxy-manno-octulosonate cytidylyltransferase YP_411130.1 476740 R 323848 CDS YP_411131.1 82701565 3784181 477865..479187 1 NC_007614.1 hypothetical protein 479187 3784181 Nmul_A0431 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411131.1 477865 D 323848 CDS YP_411132.1 82701566 3785900 479234..480280 1 NC_007614.1 glycosyl transferase family protein 480280 3785900 Nmul_A0432 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_411132.1 479234 D 323848 CDS YP_411133.1 82701567 3785901 complement(480398..481468) 1 NC_007614.1 magnesium and cobalt transport protein CorA 481468 3785901 Nmul_A0433 Nitrosospira multiformis ATCC 25196 magnesium and cobalt transport protein CorA YP_411133.1 480398 R 323848 CDS YP_411134.1 82701568 3785902 complement(481487..483010) 1 NC_007614.1 Ppx/GppA phosphatase 483010 3785902 Nmul_A0434 Nitrosospira multiformis ATCC 25196 Ppx/GppA phosphatase YP_411134.1 481487 R 323848 CDS YP_411135.1 82701569 3785903 complement(483047..483754) 1 NC_007614.1 phosphate uptake regulator PhoU 483754 3785903 Nmul_A0435 Nitrosospira multiformis ATCC 25196 phosphate uptake regulator PhoU YP_411135.1 483047 R 323848 CDS YP_411136.1 82701570 3785904 complement(483842..484501) 1 NC_007614.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 484501 3785904 Nmul_A0436 Nitrosospira multiformis ATCC 25196 ribose-5-phosphate isomerase A YP_411136.1 483842 R 323848 CDS YP_411137.1 82701571 3785905 484639..486150 1 NC_007614.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 486150 3785905 Nmul_A0437 Nitrosospira multiformis ATCC 25196 threonine dehydratase YP_411137.1 484639 D 323848 CDS YP_411138.1 82701572 3785906 486326..487654 1 NC_007614.1 hypothetical protein 487654 3785906 Nmul_A0438 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411138.1 486326 D 323848 CDS YP_411139.1 82701573 3785907 488291..489646 1 NC_007614.1 hypothetical protein 489646 3785907 Nmul_A0439 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411139.1 488291 D 323848 CDS YP_411140.1 82701574 3785908 complement(489729..490235) 1 NC_007614.1 GCN5-like N-acetyltransferase 490235 3785908 Nmul_A0440 Nitrosospira multiformis ATCC 25196 GCN5-like N-acetyltransferase YP_411140.1 489729 R 323848 CDS YP_411141.1 82701575 3785909 complement(490275..491582) 1 NC_007614.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 491582 3785909 Nmul_A0441 Nitrosospira multiformis ATCC 25196 adenylosuccinate synthetase YP_411141.1 490275 R 323848 CDS YP_411142.1 82701576 3785910 complement(491672..492853) 1 NC_007614.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 492853 hisZ 3785910 hisZ Nitrosospira multiformis ATCC 25196 ATP phosphoribosyltransferase regulatory subunit YP_411142.1 491672 R 323848 CDS YP_411143.1 82701577 3785911 complement(492908..493093) 1 NC_007614.1 hypothetical protein 493093 3785911 Nmul_A0443 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411143.1 492908 R 323848 CDS YP_411144.1 82701578 3785912 complement(493339..494217) 1 NC_007614.1 HflC protein 494217 3785912 Nmul_A0444 Nitrosospira multiformis ATCC 25196 HflC protein YP_411144.1 493339 R 323848 CDS YP_411145.1 82701579 3785913 complement(494218..495417) 1 NC_007614.1 HflK protein 495417 3785913 Nmul_A0445 Nitrosospira multiformis ATCC 25196 HflK protein YP_411145.1 494218 R 323848 CDS YP_411146.1 82701580 3785914 complement(495522..496706) 1 NC_007614.1 small GTP-binding protein domain-containing protein 496706 3785914 Nmul_A0446 Nitrosospira multiformis ATCC 25196 small GTP-binding protein domain-containing protein YP_411146.1 495522 R 323848 CDS YP_411147.1 82701581 3785915 complement(496699..496944) 1 NC_007614.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 496944 hfq 3785915 hfq Nitrosospira multiformis ATCC 25196 RNA-binding protein Hfq YP_411147.1 496699 R 323848 CDS YP_411148.1 82701582 3785916 complement(497199..498200) 1 NC_007614.1 cytochrome-c peroxidase 498200 3785916 Nmul_A0448 Nitrosospira multiformis ATCC 25196 cytochrome-c peroxidase YP_411148.1 497199 R 323848 CDS YP_411149.1 82701583 3785917 complement(498462..499025) 1 NC_007614.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 499025 3785917 Nmul_A0449 Nitrosospira multiformis ATCC 25196 dinucleoside polyphosphate hydrolase YP_411149.1 498462 R 323848 CDS YP_411150.1 82701584 3785918 499228..500937 1 NC_007614.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 500937 3785918 Nmul_A0450 Nitrosospira multiformis ATCC 25196 prolyl-tRNA synthetase YP_411150.1 499228 D 323848 CDS YP_411151.1 82701585 3785998 complement(501061..501603) 1 NC_007614.1 Thiol-disulfide isomerase-like protein 501603 3785998 Nmul_A0451 Nitrosospira multiformis ATCC 25196 Thiol-disulfide isomerase-like protein YP_411151.1 501061 R 323848 CDS YP_411152.1 82701586 3785999 complement(501630..502910) 1 NC_007614.1 ribonuclease BN 502910 3785999 Nmul_A0452 Nitrosospira multiformis ATCC 25196 ribonuclease BN YP_411152.1 501630 R 323848 CDS YP_411153.1 82701587 3786000 complement(502976..504508) 1 NC_007614.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 504508 3786000 Nmul_A0453 Nitrosospira multiformis ATCC 25196 2-isopropylmalate synthase YP_411153.1 502976 R 323848 CDS YP_411154.1 82701588 3786001 504833..505444 1 NC_007614.1 electron transport protein SCO1/SenC 505444 3786001 Nmul_A0454 Nitrosospira multiformis ATCC 25196 electron transport protein SCO1/SenC YP_411154.1 504833 D 323848 CDS YP_411155.1 82701589 3786002 505479..506303 1 NC_007614.1 hypothetical protein 506303 3786002 Nmul_A0455 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411155.1 505479 D 323848 CDS YP_411156.1 82701590 3786003 complement(506361..507752) 1 NC_007614.1 cytochrome c, class I 507752 3786003 Nmul_A0456 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_411156.1 506361 R 323848 CDS YP_411157.1 82701591 3786004 complement(507734..508180) 1 NC_007614.1 hypothetical protein 508180 3786004 Nmul_A0457 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411157.1 507734 R 323848 CDS YP_411158.1 82701592 3786005 complement(508188..508793) 1 NC_007614.1 putative cytochrome c oxidase subunit I 508793 3786005 Nmul_A0458 Nitrosospira multiformis ATCC 25196 putative cytochrome c oxidase subunit I YP_411158.1 508188 R 323848 CDS YP_411159.1 82701593 3786006 complement(508790..510805) 1 NC_007614.1 cytochrome-c oxidase 510805 3786006 Nmul_A0459 Nitrosospira multiformis ATCC 25196 cytochrome-c oxidase YP_411159.1 508790 R 323848 CDS YP_411160.1 82701594 3786007 complement(510815..511876) 1 NC_007614.1 cytochrome c oxidase subunit II 511876 3786007 Nmul_A0460 Nitrosospira multiformis ATCC 25196 cytochrome c oxidase subunit II YP_411160.1 510815 R 323848 CDS YP_411161.1 82701595 3786008 complement(512247..513188) 1 NC_007614.1 carbonate dehydratase 513188 3786008 Nmul_A0461 Nitrosospira multiformis ATCC 25196 carbonate dehydratase YP_411161.1 512247 R 323848 CDS YP_411162.1 82701596 3786009 complement(513627..515219) 1 NC_007614.1 hypothetical protein 515219 3786009 Nmul_A0462 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411162.1 513627 R 323848 CDS YP_411163.1 82701597 3786010 complement(515725..516159) 1 NC_007614.1 hypothetical protein 516159 3786010 Nmul_A0463 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411163.1 515725 R 323848 CDS YP_411164.1 82701598 3786011 complement(516178..516663) 1 NC_007614.1 hypothetical protein 516663 3786011 Nmul_A0464 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411164.1 516178 R 323848 CDS YP_411165.1 82701599 3786012 complement(516887..517753) 1 NC_007614.1 carbonate dehydratase 517753 3786012 Nmul_A0465 Nitrosospira multiformis ATCC 25196 carbonate dehydratase YP_411165.1 516887 R 323848 CDS YP_411166.1 82701600 3786013 complement(518270..519664) 1 NC_007614.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 519664 3786013 Nmul_A0466 Nitrosospira multiformis ATCC 25196 glucose-6-phosphate 1-dehydrogenase YP_411166.1 518270 R 323848 CDS YP_411167.1 82701601 3786014 complement(519869..521530) 1 NC_007614.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 521530 3786014 Nmul_A0467 Nitrosospira multiformis ATCC 25196 phosphoglucomutase YP_411167.1 519869 R 323848 CDS YP_411168.1 82701602 3786015 complement(521612..523735) 1 NC_007614.1 transketolase 523735 3786015 Nmul_A0468 Nitrosospira multiformis ATCC 25196 transketolase YP_411168.1 521612 R 323848 CDS YP_411169.1 82701603 3786016 complement(523946..525586) 1 NC_007614.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 525586 pgi 3786016 pgi Nitrosospira multiformis ATCC 25196 glucose-6-phosphate isomerase YP_411169.1 523946 R 323848 CDS YP_411170.1 82701604 3786017 complement(525583..526359) 1 NC_007614.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 526359 3786017 Nmul_A0470 Nitrosospira multiformis ATCC 25196 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_411170.1 525583 R 323848 CDS YP_411171.1 82701605 3784888 526809..527534 1 NC_007614.1 hypothetical protein 527534 3784888 Nmul_A0471 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411171.1 526809 D 323848 CDS YP_411172.1 82701606 3784889 complement(527769..528785) 1 NC_007614.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 528785 3784889 Nmul_A0472 Nitrosospira multiformis ATCC 25196 ketol-acid reductoisomerase YP_411172.1 527769 R 323848 CDS YP_411173.1 82701607 3784890 complement(528876..529367) 1 NC_007614.1 acetolactate synthase, small subunit 529367 3784890 Nmul_A0473 Nitrosospira multiformis ATCC 25196 acetolactate synthase, small subunit YP_411173.1 528876 R 323848 CDS YP_411174.1 82701608 3784891 complement(529376..531133) 1 NC_007614.1 acetolactate synthase, large subunit, biosynthetic type 531133 3784891 Nmul_A0474 Nitrosospira multiformis ATCC 25196 acetolactate synthase, large subunit, biosynthetic type YP_411174.1 529376 R 323848 CDS YP_411175.1 82701609 3784892 complement(531400..531849) 1 NC_007614.1 ferric uptake regulator family protein 531849 3784892 Nmul_A0475 Nitrosospira multiformis ATCC 25196 ferric uptake regulator family protein YP_411175.1 531400 R 323848 CDS YP_411176.1 82701610 3784893 531923..532624 1 NC_007614.1 SmpA/OmlA 532624 3784893 Nmul_A0476 Nitrosospira multiformis ATCC 25196 SmpA/OmlA YP_411176.1 531923 D 323848 CDS YP_411177.1 82701611 3784894 532666..533475 1 NC_007614.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 533475 3784894 Nmul_A0477 Nitrosospira multiformis ATCC 25196 dihydrodipicolinate reductase YP_411177.1 532666 D 323848 CDS YP_411178.1 82701612 3784895 533840..534991 1 NC_007614.1 carbamoyl-phosphate synthase, small subunit 534991 3784895 Nmul_A0478 Nitrosospira multiformis ATCC 25196 carbamoyl-phosphate synthase, small subunit YP_411178.1 533840 D 323848 CDS YP_411179.1 82701613 3784896 535037..538264 1 NC_007614.1 carbamoyl-phosphate synthase, large subunit 538264 3784896 Nmul_A0479 Nitrosospira multiformis ATCC 25196 carbamoyl-phosphate synthase, large subunit YP_411179.1 535037 D 323848 CDS YP_411180.1 82701614 3784897 538372..538848 1 NC_007614.1 GreA/GreB family elongation factor 538848 3784897 Nmul_A0480 Nitrosospira multiformis ATCC 25196 GreA/GreB family elongation factor YP_411180.1 538372 D 323848 CDS YP_411181.1 82701615 3784898 complement(539058..539345) 1 NC_007614.1 hypothetical protein 539345 3784898 Nmul_A0481 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411181.1 539058 R 323848 CDS YP_411182.1 82701616 3784899 539375..539995 1 NC_007614.1 ribosomal RNA methyltransferase RrmJ/FtsJ 539995 3784899 Nmul_A0482 Nitrosospira multiformis ATCC 25196 ribosomal RNA methyltransferase RrmJ/FtsJ YP_411182.1 539375 D 323848 CDS YP_411183.1 82701617 3784900 540160..542055 1 NC_007614.1 ATP-dependent metalloprotease FtsH 542055 3784900 Nmul_A0483 Nitrosospira multiformis ATCC 25196 ATP-dependent metalloprotease FtsH YP_411183.1 540160 D 323848 CDS YP_411184.1 82701618 3784901 542214..543119 1 NC_007614.1 dihydropteroate synthase 543119 3784901 Nmul_A0484 Nitrosospira multiformis ATCC 25196 dihydropteroate synthase YP_411184.1 542214 D 323848 CDS YP_411185.1 82701619 3784902 543137..544528 1 NC_007614.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 544528 glmM 3784902 glmM Nitrosospira multiformis ATCC 25196 phosphoglucosamine mutase YP_411185.1 543137 D 323848 CDS YP_411186.1 82701620 3784903 544726..545745 1 NC_007614.1 phosphate binding protein 545745 3784903 Nmul_A0486 Nitrosospira multiformis ATCC 25196 phosphate binding protein YP_411186.1 544726 D 323848 CDS YP_411187.1 82701621 3784904 545984..547900 1 NC_007614.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 547900 thrS 3784904 thrS Nitrosospira multiformis ATCC 25196 threonyl-tRNA synthetase YP_411187.1 545984 D 323848 CDS YP_411188.1 82701622 3784905 547978..548532 1 NC_007614.1 translation initiation factor IF-3 548532 3784905 Nmul_A0488 Nitrosospira multiformis ATCC 25196 translation initiation factor IF-3 YP_411188.1 547978 D 323848 CDS YP_411189.1 82701623 3784906 548761..548958 1 NC_007614.1 50S ribosomal protein L35 548958 3784906 Nmul_A0489 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L35 YP_411189.1 548761 D 323848 CDS YP_411190.1 82701624 3784852 548971..549330 1 NC_007614.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 549330 rplT 3784852 rplT Nitrosospira multiformis ATCC 25196 50S ribosomal protein L20 YP_411190.1 548971 D 323848 CDS YP_411191.1 82701625 3784853 549472..550506 1 NC_007614.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 550506 pheS 3784853 pheS Nitrosospira multiformis ATCC 25196 phenylalanyl-tRNA synthetase subunit alpha YP_411191.1 549472 D 323848 CDS YP_411192.1 82701626 3784854 550707..553085 1 NC_007614.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 553085 pheT 3784854 pheT Nitrosospira multiformis ATCC 25196 phenylalanyl-tRNA synthetase subunit beta YP_411192.1 550707 D 323848 CDS YP_411193.1 82701627 3784855 553136..553441 1 NC_007614.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 553441 ihfA 3784855 ihfA Nitrosospira multiformis ATCC 25196 integration host factor subunit alpha YP_411193.1 553136 D 323848 CDS YP_411194.1 82701628 3784856 553422..553787 1 NC_007614.1 MerR family transcriptional regulator 553787 3784856 Nmul_A0494 Nitrosospira multiformis ATCC 25196 MerR family transcriptional regulator YP_411194.1 553422 D 323848 CDS YP_411195.1 82701629 3784858 554084..554851 1 NC_007614.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 554851 surE 3784858 surE Nitrosospira multiformis ATCC 25196 stationary phase survival protein SurE YP_411195.1 554084 D 323848 CDS YP_411196.1 82701630 3784859 554904..555539 1 NC_007614.1 protein-L-isoaspartate O-methyltransferase 555539 3784859 Nmul_A0496 Nitrosospira multiformis ATCC 25196 protein-L-isoaspartate O-methyltransferase YP_411196.1 554904 D 323848 CDS YP_411197.1 82701631 3784860 555579..556661 1 NC_007614.1 peptidase M23B 556661 3784860 Nmul_A0497 Nitrosospira multiformis ATCC 25196 peptidase M23B YP_411197.1 555579 D 323848 CDS YP_411198.1 82701632 3784861 556677..557630 1 NC_007614.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 557630 3784861 Nmul_A0498 Nitrosospira multiformis ATCC 25196 RNA polymerase sigma factor RpoS YP_411198.1 556677 D 323848 CDS YP_411199.1 82701633 3784862 558019..558444 1 NC_007614.1 sec-independent protein translocase protein TatC 558444 3784862 Nmul_A0499 Nitrosospira multiformis ATCC 25196 sec-independent protein translocase protein TatC YP_411199.1 558019 D 323848 CDS YP_411200.1 82701634 3784863 complement(558492..559754) 1 NC_007614.1 aromatic hydrocarbon degradation protein 559754 3784863 Nmul_A0500 Nitrosospira multiformis ATCC 25196 aromatic hydrocarbon degradation protein YP_411200.1 558492 R 323848 CDS YP_411201.1 82701635 3784864 560303..560920 1 NC_007614.1 superoxide dismutase 560920 3784864 Nmul_A0501 Nitrosospira multiformis ATCC 25196 superoxide dismutase YP_411201.1 560303 D 323848 CDS YP_411202.1 82701636 3784865 560938..562149 1 NC_007614.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 562149 3784865 Nmul_A0502 Nitrosospira multiformis ATCC 25196 tyrosyl-tRNA synthetase YP_411202.1 560938 D 323848 CDS YP_411203.1 82701637 3785632 complement(568323..569405) 1 NC_007614.1 sulfate transport system permease 1 569405 3785632 Nmul_A0503 Nitrosospira multiformis ATCC 25196 sulfate transport system permease 1 YP_411203.1 568323 R 323848 CDS YP_411204.1 82701638 3785633 complement(569402..570283) 1 NC_007614.1 sulfate ABC transporter, permease CysW 570283 3785633 Nmul_A0504 Nitrosospira multiformis ATCC 25196 sulfate ABC transporter, permease CysW YP_411204.1 569402 R 323848 CDS YP_411205.1 82701639 3785634 complement(570300..571136) 1 NC_007614.1 sulfate ABC transporter, permease CysT 571136 3785634 Nmul_A0505 Nitrosospira multiformis ATCC 25196 sulfate ABC transporter, permease CysT YP_411205.1 570300 R 323848 CDS YP_411206.1 82701640 3785635 complement(571138..572031) 1 NC_007614.1 diguanylate phosphodiesterase 572031 3785635 Nmul_A0506 Nitrosospira multiformis ATCC 25196 diguanylate phosphodiesterase YP_411206.1 571138 R 323848 CDS YP_411207.1 82701641 3785636 complement(572128..573120) 1 NC_007614.1 thiosulfate-binding protein 573120 3785636 Nmul_A0507 Nitrosospira multiformis ATCC 25196 thiosulfate-binding protein YP_411207.1 572128 R 323848 CDS YP_411208.1 82701642 3785637 complement(573181..574923) 1 NC_007614.1 hypothetical protein 574923 3785637 Nmul_A0508 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411208.1 573181 R 323848 CDS YP_411209.1 82701643 3785638 575412..576308 1 NC_007614.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 576308 3785638 Nmul_A0509 Nitrosospira multiformis ATCC 25196 C32 tRNA thiolase YP_411209.1 575412 D 323848 CDS YP_411210.1 82701644 3785639 576365..577774 1 NC_007614.1 peptidase S1C, Do 577774 3785639 Nmul_A0510 Nitrosospira multiformis ATCC 25196 peptidase S1C, Do YP_411210.1 576365 D 323848 CDS YP_411211.1 82701645 3785640 577954..580554 1 NC_007614.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 580554 leuS 3785640 leuS Nitrosospira multiformis ATCC 25196 leucyl-tRNA synthetase YP_411211.1 577954 D 323848 CDS YP_411212.1 82701646 3785641 580586..581098 1 NC_007614.1 rare lipoprotein B 581098 3785641 Nmul_A0512 Nitrosospira multiformis ATCC 25196 rare lipoprotein B YP_411212.1 580586 D 323848 CDS YP_411213.1 82701647 3785642 581138..582154 1 NC_007614.1 DNA polymerase III subunit delta 582154 3785642 Nmul_A0513 Nitrosospira multiformis ATCC 25196 DNA polymerase III subunit delta YP_411213.1 581138 D 323848 CDS YP_411214.1 82701648 3785643 582550..583815 1 NC_007614.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 583815 proA 3785643 proA Nitrosospira multiformis ATCC 25196 gamma-glutamyl phosphate reductase YP_411214.1 582550 D 323848 CDS YP_411215.1 82701649 3785644 583866..585746 1 NC_007614.1 dihydrolipoamide dehydrogenase 585746 3785644 Nmul_A0515 Nitrosospira multiformis ATCC 25196 dihydrolipoamide dehydrogenase YP_411215.1 583866 D 323848 CDS YP_411216.1 82701650 3785645 complement(585829..587052) 1 NC_007614.1 Rh-like protein/ammonium transporter 587052 3785645 Nmul_A0516 Nitrosospira multiformis ATCC 25196 Rh-like protein/ammonium transporter YP_411216.1 585829 R 323848 CDS YP_411217.1 82701651 3784506 complement(587670..588296) 1 NC_007614.1 lytic transglycosylase catalytic subunit 588296 3784506 Nmul_A0517 Nitrosospira multiformis ATCC 25196 lytic transglycosylase catalytic subunit YP_411217.1 587670 R 323848 CDS YP_411218.1 82701652 3784507 complement(588509..589288) 1 NC_007614.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 589288 ksgA 3784507 ksgA Nitrosospira multiformis ATCC 25196 dimethyladenosine transferase YP_411218.1 588509 R 323848 CDS YP_411219.1 82701653 3784508 complement(589358..590338) 1 NC_007614.1 4-hydroxythreonine-4-phosphate dehydrogenase 590338 3784508 Nmul_A0519 Nitrosospira multiformis ATCC 25196 4-hydroxythreonine-4-phosphate dehydrogenase YP_411219.1 589358 R 323848 CDS YP_411220.1 82701654 3784509 complement(590375..591697) 1 NC_007614.1 PpiC-type peptidyl-prolyl cis-trans isomerase 591697 3784509 Nmul_A0520 Nitrosospira multiformis ATCC 25196 PpiC-type peptidyl-prolyl cis-trans isomerase YP_411220.1 590375 R 323848 CDS YP_411221.1 82701655 3784510 complement(591768..594557) 1 NC_007614.1 organic solvent tolerance protein 594557 3784510 Nmul_A0521 Nitrosospira multiformis ATCC 25196 organic solvent tolerance protein YP_411221.1 591768 R 323848 CDS YP_411222.1 82701656 3784511 594599..594892 1 NC_007614.1 hypothetical protein 594892 3784511 Nmul_A0522 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411222.1 594599 D 323848 CDS YP_411223.1 82701657 3784512 594921..596291 1 NC_007614.1 UDP-N-acetylmuramate 596291 3784512 Nmul_A0523 Nitrosospira multiformis ATCC 25196 UDP-N-acetylmuramate YP_411223.1 594921 D 323848 CDS YP_411224.1 82701658 3784513 complement(596351..596869) 1 NC_007614.1 hypothetical protein 596869 3784513 Nmul_A0524 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411224.1 596351 R 323848 CDS YP_411225.1 82701659 3784514 complement(597597..599657) 1 NC_007614.1 glucose-methanol-choline oxidoreductase 599657 3784514 Nmul_A0525 Nitrosospira multiformis ATCC 25196 glucose-methanol-choline oxidoreductase YP_411225.1 597597 R 323848 CDS YP_411226.1 82701660 3784515 complement(599722..602367) 1 NC_007614.1 hypothetical protein 602367 3784515 Nmul_A0526 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411226.1 599722 R 323848 CDS YP_411227.1 82701661 3784516 complement(602454..603491) 1 NC_007614.1 tyrosinase 603491 3784516 Nmul_A0527 Nitrosospira multiformis ATCC 25196 tyrosinase YP_411227.1 602454 R 323848 CDS YP_411228.1 82701662 3784517 604068..604499 1 NC_007614.1 hypothetical protein 604499 3784517 Nmul_A0528 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411228.1 604068 D 323848 CDS YP_411229.1 82701663 3784518 604712..606016 1 NC_007614.1 hypothetical protein 606016 3784518 Nmul_A0529 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411229.1 604712 D 323848 CDS YP_411230.1 82701664 3784519 606028..607542 1 NC_007614.1 peroxidase 607542 3784519 Nmul_A0530 Nitrosospira multiformis ATCC 25196 peroxidase YP_411230.1 606028 D 323848 CDS YP_411231.1 82701665 3784520 607539..608744 1 NC_007614.1 hypothetical protein 608744 3784520 Nmul_A0531 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411231.1 607539 D 323848 CDS YP_411232.1 82701666 3784521 complement(610090..611751) 1 NC_007614.1 arachidonate 15-lipoxygenase 611751 3784521 Nmul_A0532 Nitrosospira multiformis ATCC 25196 arachidonate 15-lipoxygenase YP_411232.1 610090 R 323848 CDS YP_411233.1 82701667 3784522 complement(611823..613418) 1 NC_007614.1 animal heme peroxidase 613418 3784522 Nmul_A0533 Nitrosospira multiformis ATCC 25196 animal heme peroxidase YP_411233.1 611823 R 323848 CDS YP_411234.1 82701668 3784523 613763..615859 1 NC_007614.1 peptidase S8/S53 subtilisin kexin sedolisin 615859 3784523 Nmul_A0534 Nitrosospira multiformis ATCC 25196 peptidase S8/S53 subtilisin kexin sedolisin YP_411234.1 613763 D 323848 CDS YP_411235.1 82701669 3784524 615898..617214 1 NC_007614.1 hypothetical protein 617214 3784524 Nmul_A0535 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411235.1 615898 D 323848 CDS YP_411236.1 82701670 3784525 617543..619396 1 NC_007614.1 ribonuclease II 619396 3784525 Nmul_A0536 Nitrosospira multiformis ATCC 25196 ribonuclease II YP_411236.1 617543 D 323848 CDS YP_411237.1 82701671 3784720 619465..620466 1 NC_007614.1 TonB-like protein 620466 3784720 Nmul_A0537 Nitrosospira multiformis ATCC 25196 TonB-like protein YP_411237.1 619465 D 323848 CDS YP_411238.1 82701672 3784721 620577..621410 1 NC_007614.1 shikimate 5-dehydrogenase 621410 3784721 Nmul_A0538 Nitrosospira multiformis ATCC 25196 shikimate 5-dehydrogenase YP_411238.1 620577 D 323848 CDS YP_411239.1 82701673 3784722 621497..622189 1 NC_007614.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 622189 mtgA 3784722 mtgA Nitrosospira multiformis ATCC 25196 monofunctional biosynthetic peptidoglycan transglycosylase YP_411239.1 621497 D 323848 CDS YP_411240.1 82701674 3784723 622407..623843 1 NC_007614.1 magnesium transporter 623843 3784723 Nmul_A0540 Nitrosospira multiformis ATCC 25196 magnesium transporter YP_411240.1 622407 D 323848 CDS YP_411241.1 82701675 3784724 complement(623868..625124) 1 NC_007614.1 diaminopimelate decarboxylase 625124 3784724 Nmul_A0541 Nitrosospira multiformis ATCC 25196 diaminopimelate decarboxylase YP_411241.1 623868 R 323848 CDS YP_411242.1 82701676 3784725 complement(625455..626666) 1 NC_007614.1 response regulator receiver domain-containing protein 626666 3784725 Nmul_A0542 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_411242.1 625455 R 323848 CDS YP_411243.1 82701677 3784726 complement(626663..627151) 1 NC_007614.1 response regulator receiver domain-containing protein 627151 3784726 Nmul_A0543 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_411243.1 626663 R 323848 CDS YP_411244.1 82701678 3784727 complement(627117..630680) 1 NC_007614.1 hypothetical protein 630680 3784727 Nmul_A0544 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411244.1 627117 R 323848 CDS YP_411245.1 82701679 3784728 complement(630830..631699) 1 NC_007614.1 integrase catalytic subunit 631699 3784728 Nmul_A0545 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_411245.1 630830 R 323848 CDS YP_411246.1 82701680 3784729 complement(631696..631983) 1 NC_007614.1 transposase IS3/IS911 631983 3784729 Nmul_A0546 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_411246.1 631696 R 323848 CDS YP_411247.1 82701681 3784730 complement(632096..632752) 1 NC_007614.1 hypothetical protein 632752 3784730 Nmul_A0547 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411247.1 632096 R 323848 CDS YP_411248.1 82701682 3784731 complement(632769..633620) 1 NC_007614.1 phospholipid/glycerol acyltransferase 633620 3784731 Nmul_A0548 Nitrosospira multiformis ATCC 25196 phospholipid/glycerol acyltransferase YP_411248.1 632769 R 323848 CDS YP_411249.1 82701683 3784732 complement(633617..634150) 1 NC_007614.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 634150 3784732 Nmul_A0549 Nitrosospira multiformis ATCC 25196 D,D-heptose 1,7-bisphosphate phosphatase YP_411249.1 633617 R 323848 CDS YP_411250.1 82701684 3784733 complement(634166..636385) 1 NC_007614.1 glycyl-tRNA synthetase subunit beta 636385 3784733 Nmul_A0550 Nitrosospira multiformis ATCC 25196 glycyl-tRNA synthetase subunit beta YP_411250.1 634166 R 323848 CDS YP_411251.1 82701685 3784734 complement(636382..637287) 1 NC_007614.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 637287 glyQ 3784734 glyQ Nitrosospira multiformis ATCC 25196 glycyl-tRNA synthetase subunit alpha YP_411251.1 636382 R 323848 CDS YP_411252.1 82701686 3784735 complement(637377..638879) 1 NC_007614.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 638879 lnt 3784735 lnt Nitrosospira multiformis ATCC 25196 apolipoprotein N-acyltransferase YP_411252.1 637377 R 323848 CDS YP_411253.1 82701687 3784736 complement(639118..640305) 1 NC_007614.1 histidine kinase 640305 3784736 Nmul_A0553 Nitrosospira multiformis ATCC 25196 histidine kinase YP_411253.1 639118 R 323848 CDS YP_411254.1 82701688 3784737 640663..642036 1 NC_007614.1 peptidase M23B 642036 3784737 Nmul_A0554 Nitrosospira multiformis ATCC 25196 peptidase M23B YP_411254.1 640663 D 323848 CDS YP_411255.1 82701689 3784738 642089..643189 1 NC_007614.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 643189 anmK 3784738 anmK Nitrosospira multiformis ATCC 25196 anhydro-N-acetylmuramic acid kinase YP_411255.1 642089 D 323848 CDS YP_411256.1 82701690 3784776 complement(643277..643618) 1 NC_007614.1 HesB/YadR/YfhF 643618 3784776 Nmul_A0556 Nitrosospira multiformis ATCC 25196 HesB/YadR/YfhF YP_411256.1 643277 R 323848 CDS YP_411257.1 82701691 3784777 complement(643697..644122) 1 NC_007614.1 hypothetical protein 644122 3784777 Nmul_A0557 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411257.1 643697 R 323848 CDS YP_411258.1 82701692 3784778 complement(644132..644908) 1 NC_007614.1 hypothetical protein 644908 3784778 Nmul_A0558 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411258.1 644132 R 323848 CDS YP_411259.1 82701693 3784779 complement(645222..646250) 1 NC_007614.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 646250 argC 3784779 argC Nitrosospira multiformis ATCC 25196 N-acetyl-gamma-glutamyl-phosphate reductase YP_411259.1 645222 R 323848 CDS YP_411260.1 82701694 3784780 complement(646423..646815) 1 NC_007614.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 646815 rpsI 3784780 rpsI Nitrosospira multiformis ATCC 25196 30S ribosomal protein S9 YP_411260.1 646423 R 323848 CDS YP_411261.1 82701695 3784781 complement(646818..647252) 1 NC_007614.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 647252 rplM 3784781 rplM Nitrosospira multiformis ATCC 25196 50S ribosomal protein L13 YP_411261.1 646818 R 323848 CDS YP_411262.1 82701696 3784782 647597..648469 1 NC_007614.1 phosphoribulokinase 648469 3784782 Nmul_A0562 Nitrosospira multiformis ATCC 25196 phosphoribulokinase YP_411262.1 647597 D 323848 CDS YP_411263.1 82701697 3784783 648673..650904 1 NC_007614.1 UvrD/REP helicase 650904 3784783 Nmul_A0563 Nitrosospira multiformis ATCC 25196 UvrD/REP helicase YP_411263.1 648673 D 323848 CDS YP_411264.1 82701698 3784784 complement(650989..651726) 1 NC_007614.1 transmembrane protein 651726 3784784 Nmul_A0564 Nitrosospira multiformis ATCC 25196 transmembrane protein YP_411264.1 650989 R 323848 CDS YP_411265.1 82701699 3784785 complement(651780..652730) 1 NC_007614.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 652730 3784785 Nmul_A0565 Nitrosospira multiformis ATCC 25196 homoserine kinase YP_411265.1 651780 R 323848 CDS YP_411266.1 82701700 3784786 complement(652788..653153) 1 NC_007614.1 hypothetical protein 653153 3784786 Nmul_A0566 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411266.1 652788 R 323848 CDS YP_411267.1 82701701 3784787 complement(653209..653937) 1 NC_007614.1 hypothetical protein 653937 3784787 Nmul_A0567 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411267.1 653209 R 323848 CDS YP_411268.1 82701702 3784788 653959..656676 1 NC_007614.1 DNA polymerase I 656676 3784788 Nmul_A0568 Nitrosospira multiformis ATCC 25196 DNA polymerase I YP_411268.1 653959 D 323848 CDS YP_411269.1 82701703 3784789 656785..657048 1 NC_007614.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 657048 rpsP 3784789 rpsP Nitrosospira multiformis ATCC 25196 30S ribosomal protein S16 YP_411269.1 656785 D 323848 CDS YP_411270.1 82701704 3784790 657071..657577 1 NC_007614.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 657577 rimM 3784790 rimM Nitrosospira multiformis ATCC 25196 16S rRNA-processing protein RimM YP_411270.1 657071 D 323848 CDS YP_411271.1 82701705 3784791 657580..658350 1 NC_007614.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 658350 trmD 3784791 trmD Nitrosospira multiformis ATCC 25196 tRNA (guanine-N(1)-)-methyltransferase YP_411271.1 657580 D 323848 CDS YP_411272.1 82701706 3784792 658405..658812 1 NC_007614.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 658812 rplS 3784792 rplS Nitrosospira multiformis ATCC 25196 50S ribosomal protein L19 YP_411272.1 658405 D 323848 CDS YP_411273.1 82701707 3784793 complement(659152..659742) 1 NC_007614.1 cytochrome c, class I 659742 3784793 Nmul_A0573 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_411273.1 659152 R 323848 CDS YP_411274.1 82701708 3784794 complement(659862..660335) 1 NC_007614.1 hypothetical protein 660335 3784794 Nmul_A0574 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411274.1 659862 R 323848 CDS YP_411275.1 82701709 3784795 complement(660332..660796) 1 NC_007614.1 blue (type1) copper domain-containing protein 660796 3784795 Nmul_A0575 Nitrosospira multiformis ATCC 25196 blue (type1) copper domain-containing protein YP_411275.1 660332 R 323848 CDS YP_411276.1 82701710 3783974 complement(660972..661943) 1 NC_007614.1 CorA-like Mg2+ transporter protein 661943 3783974 Nmul_A0576 Nitrosospira multiformis ATCC 25196 CorA-like Mg2+ transporter protein YP_411276.1 660972 R 323848 CDS YP_411277.1 82701711 3783975 662571..663152 1 NC_007614.1 hypothetical protein 663152 3783975 Nmul_A0577 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411277.1 662571 D 323848 CDS YP_411278.1 82701712 3783976 663194..664417 1 NC_007614.1 hypothetical protein 664417 3783976 Nmul_A0578 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411278.1 663194 D 323848 CDS YP_411279.1 82701713 3783977 complement(664492..664809) 1 NC_007614.1 hypothetical protein 664809 3783977 Nmul_A0579 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411279.1 664492 R 323848 CDS YP_411280.1 82701714 3783978 complement(664812..665396) 1 NC_007614.1 hypothetical protein 665396 3783978 Nmul_A0580 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411280.1 664812 R 323848 CDS YP_411281.1 82701715 3783979 complement(665449..666264) 1 NC_007614.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 666264 3783979 Nmul_A0581 Nitrosospira multiformis ATCC 25196 pyrroline-5-carboxylate reductase YP_411281.1 665449 R 323848 CDS YP_411282.1 82701716 3783980 complement(666278..667096) 1 NC_007614.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 667096 3783980 Nmul_A0582 Nitrosospira multiformis ATCC 25196 formamidopyrimidine-DNA glycosylase YP_411282.1 666278 R 323848 CDS YP_411283.1 82701717 3783981 complement(667236..668588) 1 NC_007614.1 hypothetical protein 668588 3783981 Nmul_A0583 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411283.1 667236 R 323848 CDS YP_411284.1 82701718 3783982 complement(668591..669325) 1 NC_007614.1 putative ABC-2 type transport system permease 669325 3783982 Nmul_A0584 Nitrosospira multiformis ATCC 25196 putative ABC-2 type transport system permease YP_411284.1 668591 R 323848 CDS YP_411285.1 82701719 3783983 complement(669322..670065) 1 NC_007614.1 ABC transporter-like protein 670065 3783983 Nmul_A0585 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_411285.1 669322 R 323848 CDS YP_411286.1 82701720 3783984 670292..672013 1 NC_007614.1 hypothetical protein 672013 3783984 Nmul_A0586 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411286.1 670292 D 323848 CDS YP_411287.1 82701721 3783985 672033..672776 1 NC_007614.1 outer membrane lipoprotein LolB 672776 3783985 Nmul_A0587 Nitrosospira multiformis ATCC 25196 outer membrane lipoprotein LolB YP_411287.1 672033 D 323848 CDS YP_411288.1 82701722 3783986 672751..673635 1 NC_007614.1 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 673635 3783986 Nmul_A0588 Nitrosospira multiformis ATCC 25196 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_411288.1 672751 D 323848 CDS YP_411289.1 82701723 3783988 673818..674768 1 NC_007614.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 674768 3783988 Nmul_A0589 Nitrosospira multiformis ATCC 25196 ribose-phosphate pyrophosphokinase YP_411289.1 673818 D 323848 CDS YP_411290.1 82701724 3783989 674918..675604 1 NC_007614.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 675604 3783989 Nmul_A0590 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L25/general stress protein Ctc YP_411290.1 674918 D 323848 CDS YP_411291.1 82701725 3783990 676160..676735 1 NC_007614.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 676735 3783990 Nmul_A0591 Nitrosospira multiformis ATCC 25196 peptidyl-tRNA hydrolase YP_411291.1 676160 D 323848 CDS YP_411292.1 82701726 3783991 676959..678062 1 NC_007614.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 678062 3783991 Nmul_A0592 Nitrosospira multiformis ATCC 25196 GTP-dependent nucleic acid-binding protein EngD YP_411292.1 676959 D 323848 CDS YP_411293.1 82701727 3786668 complement(678338..678517) 1 NC_007614.1 PE-PGRS family protein 678517 3786668 Nmul_A0593 Nitrosospira multiformis ATCC 25196 PE-PGRS family protein YP_411293.1 678338 R 323848 CDS YP_411294.1 82701728 3786669 complement(678825..678950) 1 NC_007614.1 ISRSO14-transposase orfB protein 678950 3786669 Nmul_A0594 Nitrosospira multiformis ATCC 25196 ISRSO14-transposase orfB protein YP_411294.1 678825 R 323848 CDS YP_411295.1 82701729 3786671 679815..680273 1 NC_007614.1 hypothetical protein 680273 3786671 Nmul_A0596 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411295.1 679815 D 323848 CDS YP_411296.1 82701730 3786672 complement(680997..681344) 1 NC_007614.1 transposase IS4 681344 3786672 Nmul_A0597 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_411296.1 680997 R 323848 CDS YP_411297.1 82701731 3786673 complement(681386..681754) 1 NC_007614.1 transposase 681754 3786673 Nmul_A0598 Nitrosospira multiformis ATCC 25196 transposase YP_411297.1 681386 R 323848 CDS YP_411298.1 82701732 3786674 complement(682064..682291) 1 NC_007614.1 helix-turn-helix protein, CopG 682291 3786674 Nmul_A0599 Nitrosospira multiformis ATCC 25196 helix-turn-helix protein, CopG YP_411298.1 682064 R 323848 CDS YP_411299.1 82701733 3786675 682307..682630 1 NC_007614.1 hypothetical protein 682630 3786675 Nmul_A0600 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411299.1 682307 D 323848 CDS YP_411300.1 82701734 3786676 683304..683597 1 NC_007614.1 type I antifreeze protein 683597 3786676 Nmul_A0601 Nitrosospira multiformis ATCC 25196 type I antifreeze protein YP_411300.1 683304 D 323848 CDS YP_411301.1 82701735 3786677 683619..684287 1 NC_007614.1 hypothetical protein 684287 3786677 Nmul_A0602 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411301.1 683619 D 323848 CDS YP_411302.1 82701736 3786678 684314..686080 1 NC_007614.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 686080 aspS 3786678 aspS Nitrosospira multiformis ATCC 25196 aspartyl-tRNA synthetase YP_411302.1 684314 D 323848 CDS YP_411303.1 82701737 3786679 686195..686668 1 NC_007614.1 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 686668 ntpA 3786679 ntpA Nitrosospira multiformis ATCC 25196 dATP pyrophosphohydrolase YP_411303.1 686195 D 323848 CDS YP_411304.1 82701738 3786680 686851..687951 1 NC_007614.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 687951 3786680 Nmul_A0605 Nitrosospira multiformis ATCC 25196 quinolinate synthetase YP_411304.1 686851 D 323848 CDS YP_411305.1 82701739 3786681 687988..688740 1 NC_007614.1 endonuclease/exonuclease/phosphatase 688740 3786681 Nmul_A0606 Nitrosospira multiformis ATCC 25196 endonuclease/exonuclease/phosphatase YP_411305.1 687988 D 323848 CDS YP_411306.1 82701740 3786682 688740..689834 1 NC_007614.1 Sua5/YciO/YrdC/YwlC 689834 3786682 Nmul_A0607 Nitrosospira multiformis ATCC 25196 Sua5/YciO/YrdC/YwlC YP_411306.1 688740 D 323848 CDS YP_411307.1 82701741 3786683 689846..690625 1 NC_007614.1 HAD family hydrolase 690625 3786683 Nmul_A0608 Nitrosospira multiformis ATCC 25196 HAD family hydrolase YP_411307.1 689846 D 323848 CDS YP_411308.1 82701742 3786684 690794..691243 1 NC_007614.1 phosphate-starvation-inducible E 691243 3786684 Nmul_A0609 Nitrosospira multiformis ATCC 25196 phosphate-starvation-inducible E YP_411308.1 690794 D 323848 CDS YP_411309.1 82701743 3786685 691245..691748 1 NC_007614.1 phosphoribosylaminoimidazole carboxylase, catalytic subunit 691748 3786685 Nmul_A0610 Nitrosospira multiformis ATCC 25196 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_411309.1 691245 D 323848 CDS YP_411310.1 82701744 3786686 691745..692965 1 NC_007614.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 692965 3786686 Nmul_A0611 Nitrosospira multiformis ATCC 25196 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_411310.1 691745 D 323848 CDS YP_411311.1 82701745 3786687 693042..693857 1 NC_007614.1 phosphoribosylaminoimidazole-succinocarboxamide synthase 693857 3786687 Nmul_A0612 Nitrosospira multiformis ATCC 25196 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_411311.1 693042 D 323848 CDS YP_411312.1 82701746 3784409 complement(693854..694651) 1 NC_007614.1 hypothetical protein 694651 3784409 Nmul_A0613 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411312.1 693854 R 323848 CDS YP_411313.1 82701747 3784410 complement(694734..695198) 1 NC_007614.1 hypothetical protein 695198 3784410 Nmul_A0614 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411313.1 694734 R 323848 CDS YP_411314.1 82701748 3784411 695349..696932 1 NC_007614.1 animal heme peroxidase 696932 3784411 Nmul_A0615 Nitrosospira multiformis ATCC 25196 animal heme peroxidase YP_411314.1 695349 D 323848 CDS YP_411315.1 82701749 3784412 complement(697161..698495) 1 NC_007614.1 esterase/lipase/thioesterase family protein 698495 3784412 Nmul_A0616 Nitrosospira multiformis ATCC 25196 esterase/lipase/thioesterase family protein YP_411315.1 697161 R 323848 CDS YP_411316.1 82701750 3784413 698972..700189 1 NC_007614.1 poly-gamma-glutamate synthesis protein 700189 3784413 Nmul_A0617 Nitrosospira multiformis ATCC 25196 poly-gamma-glutamate synthesis protein YP_411316.1 698972 D 323848 CDS YP_411317.1 82701751 3784414 complement(700464..701831) 1 NC_007614.1 putative cytochrome c1 signal peptide protein 701831 3784414 Nmul_A0618 Nitrosospira multiformis ATCC 25196 putative cytochrome c1 signal peptide protein YP_411317.1 700464 R 323848 CDS YP_411318.1 82701752 3784415 702231..702911 1 NC_007614.1 hypothetical protein 702911 3784415 Nmul_A0619 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411318.1 702231 D 323848 CDS YP_411319.1 82701753 3784416 702944..703417 1 NC_007614.1 MaoC-like dehydratase 703417 3784416 Nmul_A0620 Nitrosospira multiformis ATCC 25196 MaoC-like dehydratase YP_411319.1 702944 D 323848 CDS YP_411320.1 82701754 3784417 703910..704443 1 NC_007614.1 transposase IS4 704443 3784417 Nmul_A0621 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_411320.1 703910 D 323848 CDS YP_411321.1 82701755 3784418 complement(704602..704883) 1 NC_007614.1 hypothetical protein 704883 3784418 Nmul_A0622 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411321.1 704602 R 323848 CDS YP_411322.1 82701756 3784419 705130..705408 1 NC_007614.1 hypothetical protein 705408 3784419 Nmul_A0623 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411322.1 705130 D 323848 CDS YP_411323.1 82701757 3784420 complement(705620..705916) 1 NC_007614.1 hypothetical protein 705916 3784420 Nmul_A0624 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411323.1 705620 R 323848 CDS YP_411324.1 82701758 3784421 complement(706088..707563) 1 NC_007614.1 amidohydrolase 2 707563 3784421 Nmul_A0625 Nitrosospira multiformis ATCC 25196 amidohydrolase 2 YP_411324.1 706088 R 323848 CDS YP_411325.1 82701759 3784422 complement(708354..708668) 1 NC_007614.1 hypothetical protein 708668 3784422 Nmul_A0626 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411325.1 708354 R 323848 CDS YP_411326.1 82701760 3784423 complement(708665..708868) 1 NC_007614.1 hypothetical protein 708868 3784423 Nmul_A0627 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411326.1 708665 R 323848 CDS YP_411327.1 82701761 3784424 709362..711428 1 NC_007614.1 TonB-dependent receptor 711428 3784424 Nmul_A0628 Nitrosospira multiformis ATCC 25196 TonB-dependent receptor YP_411327.1 709362 D 323848 CDS YP_411328.1 82701762 3784425 711715..713586 1 NC_007614.1 ABC transporter transmembrane protein 713586 3784425 Nmul_A0629 Nitrosospira multiformis ATCC 25196 ABC transporter transmembrane protein YP_411328.1 711715 D 323848 CDS YP_411329.1 82701763 3784426 715310..717409 1 NC_007614.1 diguanylate cyclase/phosphodiesterase 717409 3784426 Nmul_A0630 Nitrosospira multiformis ATCC 25196 diguanylate cyclase/phosphodiesterase YP_411329.1 715310 D 323848 CDS YP_411330.1 82701764 3784427 complement(717475..719487) 1 NC_007614.1 polysaccharide biosynthesis protein CapD 719487 3784427 Nmul_A0631 Nitrosospira multiformis ATCC 25196 polysaccharide biosynthesis protein CapD YP_411330.1 717475 R 323848 CDS YP_411331.1 82701765 3785405 complement(719489..720547) 1 NC_007614.1 glycosyl transferase family protein 720547 3785405 Nmul_A0632 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_411331.1 719489 R 323848 CDS YP_411332.1 82701766 3785406 720720..721988 1 NC_007614.1 Sodium:dicarboxylate symporter 721988 3785406 Nmul_A0633 Nitrosospira multiformis ATCC 25196 Sodium:dicarboxylate symporter YP_411332.1 720720 D 323848 CDS YP_411333.1 82701767 3785407 722327..723550 1 NC_007614.1 BNR repeat-containing glycosyl hydrolase 723550 3785407 Nmul_A0634 Nitrosospira multiformis ATCC 25196 BNR repeat-containing glycosyl hydrolase YP_411333.1 722327 D 323848 CDS YP_411334.1 82701768 3785408 723668..726292 1 NC_007614.1 TonB-dependent receptor 726292 3785408 Nmul_A0635 Nitrosospira multiformis ATCC 25196 TonB-dependent receptor YP_411334.1 723668 D 323848 CDS YP_411335.1 82701769 3785409 complement(726339..727169) 1 NC_007614.1 phosphoserine phosphatase SerB 727169 3785409 Nmul_A0636 Nitrosospira multiformis ATCC 25196 phosphoserine phosphatase SerB YP_411335.1 726339 R 323848 CDS YP_411336.1 82701770 3785410 727670..728533 1 NC_007614.1 hypothetical protein 728533 3785410 Nmul_A0637 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411336.1 727670 D 323848 CDS YP_411337.1 82701771 3785411 complement(728537..730246) 1 NC_007614.1 diguanylate cyclase 730246 3785411 Nmul_A0638 Nitrosospira multiformis ATCC 25196 diguanylate cyclase YP_411337.1 728537 R 323848 CDS YP_411338.1 82701772 3785412 complement(730434..733904) 1 NC_007614.1 transcription-repair coupling factor 733904 3785412 Nmul_A0639 Nitrosospira multiformis ATCC 25196 transcription-repair coupling factor YP_411338.1 730434 R 323848 CDS YP_411339.1 82701773 3785413 complement(734129..735970) 1 NC_007614.1 single-stranded-DNA-specific exonuclease RecJ 735970 3785413 Nmul_A0640 Nitrosospira multiformis ATCC 25196 single-stranded-DNA-specific exonuclease RecJ YP_411339.1 734129 R 323848 CDS YP_411340.1 82701774 3785414 complement(736043..737203) 1 NC_007614.1 hypothetical protein 737203 3785414 Nmul_A0641 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411340.1 736043 R 323848 CDS YP_411341.1 82701775 3785415 737586..737843 1 NC_007614.1 hypothetical protein 737843 3785415 Nmul_A0642 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411341.1 737586 D 323848 CDS YP_411342.1 82701776 3785416 738138..739229 1 NC_007614.1 hypothetical protein 739229 3785416 Nmul_A0643 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411342.1 738138 D 323848 CDS YP_411343.1 82701777 3785417 complement(739575..739994) 1 NC_007614.1 GTP cyclohydrolase I 739994 3785417 Nmul_A0644 Nitrosospira multiformis ATCC 25196 GTP cyclohydrolase I YP_411343.1 739575 R 323848 CDS YP_411344.1 82701778 3785418 740138..743710 1 NC_007614.1 chromosome segregation protein SMC 743710 3785418 Nmul_A0645 Nitrosospira multiformis ATCC 25196 chromosome segregation protein SMC YP_411344.1 740138 D 323848 CDS YP_411345.1 82701779 3785419 743718..745043 1 NC_007614.1 ZipA, C-terminal FtsZ-binding region 745043 3785419 Nmul_A0646 Nitrosospira multiformis ATCC 25196 ZipA, C-terminal FtsZ-binding region YP_411345.1 743718 D 323848 CDS YP_411346.1 82701780 3785420 745040..747163 1 NC_007614.1 DNA ligase, NAD-dependent 747163 3785420 Nmul_A0647 Nitrosospira multiformis ATCC 25196 DNA ligase, NAD-dependent YP_411346.1 745040 D 323848 CDS YP_411347.1 82701781 3785421 747163..748047 1 NC_007614.1 UTP-glucose-1-phosphate uridylyltransferase 748047 3785421 Nmul_A0648 Nitrosospira multiformis ATCC 25196 UTP-glucose-1-phosphate uridylyltransferase YP_411347.1 747163 D 323848 CDS YP_411348.1 82701782 3785422 748110..748655 1 NC_007614.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 748655 3785422 Nmul_A0649 Nitrosospira multiformis ATCC 25196 hypoxanthine-guanine phosphoribosyltransferase YP_411348.1 748110 D 323848 CDS YP_411349.1 82701783 3785423 748672..749418 1 NC_007614.1 Catalyzes the phosphorolytic cleavage of 6-oxopurine nucleosides; 5'-methylthioadenosine phosphorylase 749418 3785423 Nmul_A0650 Nitrosospira multiformis ATCC 25196 5'-methylthioadenosine phosphorylase YP_411349.1 748672 D 323848 CDS YP_411350.1 82701784 3785424 749408..749941 1 NC_007614.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 749941 def 3785424 def Nitrosospira multiformis ATCC 25196 peptide deformylase YP_411350.1 749408 D 323848 CDS YP_411351.1 82701785 3785137 complement(749996..750583) 1 NC_007614.1 shikimate kinase 750583 3785137 Nmul_A0652 Nitrosospira multiformis ATCC 25196 shikimate kinase YP_411351.1 749996 R 323848 CDS YP_411352.1 82701786 3785138 750612..750956 1 NC_007614.1 hypothetical protein 750956 3785138 Nmul_A0653 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411352.1 750612 D 323848 CDS YP_411353.1 82701787 3785139 complement(751245..751592) 1 NC_007614.1 hypothetical protein 751592 3785139 Nmul_A0654 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411353.1 751245 R 323848 CDS YP_411354.1 82701788 3785140 complement(751589..751957) 1 NC_007614.1 hypothetical protein 751957 3785140 Nmul_A0655 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411354.1 751589 R 323848 CDS YP_411355.1 82701789 3785141 complement(751994..752407) 1 NC_007614.1 hypothetical protein 752407 3785141 Nmul_A0656 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411355.1 751994 R 323848 CDS YP_411356.2 162139865 3785142 752928..753674 1 NC_007614.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 753674 rpsB 3785142 rpsB Nitrosospira multiformis ATCC 25196 30S ribosomal protein S2 YP_411356.2 752928 D 323848 CDS YP_411357.1 82701791 3785143 753754..754662 1 NC_007614.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 754662 tsf 3785143 tsf Nitrosospira multiformis ATCC 25196 elongation factor Ts YP_411357.1 753754 D 323848 CDS YP_411358.1 82701792 3785144 754677..755393 1 NC_007614.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 755393 pyrH 3785144 pyrH Nitrosospira multiformis ATCC 25196 uridylate kinase YP_411358.1 754677 D 323848 CDS YP_411359.1 82701793 3785145 755531..756088 1 NC_007614.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 756088 frr 3785145 frr Nitrosospira multiformis ATCC 25196 ribosome recycling factor YP_411359.1 755531 D 323848 CDS YP_411360.1 82701794 3785146 756202..756999 1 NC_007614.1 undecaprenyl diphosphate synthase 756999 3785146 Nmul_A0661 Nitrosospira multiformis ATCC 25196 undecaprenyl diphosphate synthase YP_411360.1 756202 D 323848 CDS YP_411361.1 82701795 3785147 757044..757856 1 NC_007614.1 phosphatidate cytidylyltransferase 757856 3785147 Nmul_A0662 Nitrosospira multiformis ATCC 25196 phosphatidate cytidylyltransferase YP_411361.1 757044 D 323848 CDS YP_411362.1 82701796 3785148 757859..759046 1 NC_007614.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 759046 3785148 Nmul_A0663 Nitrosospira multiformis ATCC 25196 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_411362.1 757859 D 323848 CDS YP_411363.1 82701797 3785149 759353..760720 1 NC_007614.1 peptidase M50 membrane-associated zinc metallopeptidase 760720 3785149 Nmul_A0664 Nitrosospira multiformis ATCC 25196 peptidase M50 membrane-associated zinc metallopeptidase YP_411363.1 759353 D 323848 CDS YP_411364.1 82701798 3785150 760724..763006 1 NC_007614.1 surface antigen (D15) 763006 3785150 Nmul_A0665 Nitrosospira multiformis ATCC 25196 surface antigen (D15) YP_411364.1 760724 D 323848 CDS YP_411365.1 82701799 3785151 763026..763553 1 NC_007614.1 Outer membrane chaperone Skp 763553 3785151 Nmul_A0666 Nitrosospira multiformis ATCC 25196 Outer membrane chaperone Skp YP_411365.1 763026 D 323848 CDS YP_411366.1 82701800 3785152 763662..764102 1 NC_007614.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 764102 fabZ 3785152 fabZ Nitrosospira multiformis ATCC 25196 (3R)-hydroxymyristoyl-ACP dehydratase YP_411366.1 763662 D 323848 CDS YP_411367.1 82701801 3785153 764134..764733 1 NC_007614.1 ribonuclease H 764733 3785153 Nmul_A0668 Nitrosospira multiformis ATCC 25196 ribonuclease H YP_411367.1 764134 D 323848 CDS YP_411368.1 82701802 3785154 764865..765443 1 NC_007614.1 FKBP-type peptidyl-prolyl cis-trans isomerase 765443 3785154 Nmul_A0669 Nitrosospira multiformis ATCC 25196 FKBP-type peptidyl-prolyl cis-trans isomerase YP_411368.1 764865 D 323848 CDS YP_411369.1 82701803 3785155 complement(765489..768197) 1 NC_007614.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 768197 3785155 Nmul_A0670 Nitrosospira multiformis ATCC 25196 DNA mismatch repair protein MutS YP_411369.1 765489 R 323848 CDS YP_411370.1 82701804 3784048 complement(768224..770929) 1 NC_007614.1 hypothetical protein 770929 3784048 Nmul_A0671 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411370.1 768224 R 323848 CDS YP_411371.1 82701805 3784049 complement(771069..771890) 1 NC_007614.1 inositol-1(or 4)-monophosphatase 771890 3784049 Nmul_A0672 Nitrosospira multiformis ATCC 25196 inositol-1(or 4)-monophosphatase YP_411371.1 771069 R 323848 CDS YP_411372.1 82701806 3784050 772035..772838 1 NC_007614.1 RNA methyltransferase TrmH 772838 3784050 Nmul_A0673 Nitrosospira multiformis ATCC 25196 RNA methyltransferase TrmH YP_411372.1 772035 D 323848 CDS YP_411373.1 82701807 3784051 773201..773674 1 NC_007614.1 BadM/Rrf2 family transcriptional regulator 773674 3784051 Nmul_A0674 Nitrosospira multiformis ATCC 25196 BadM/Rrf2 family transcriptional regulator YP_411373.1 773201 D 323848 CDS YP_411374.1 82701808 3784052 773738..774895 1 NC_007614.1 class V aminotransferase 774895 3784052 Nmul_A0675 Nitrosospira multiformis ATCC 25196 class V aminotransferase YP_411374.1 773738 D 323848 CDS YP_411375.1 82701809 3784053 775331..776029 1 NC_007614.1 VacJ-like lipoprotein 776029 3784053 Nmul_A0676 Nitrosospira multiformis ATCC 25196 VacJ-like lipoprotein YP_411375.1 775331 D 323848 CDS YP_411376.1 82701810 3784054 776183..776587 1 NC_007614.1 hypothetical protein 776587 3784054 Nmul_A0677 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411376.1 776183 D 323848 CDS YP_411377.1 82701811 3784055 776976..777755 1 NC_007614.1 transcriptional regulator-like protein 777755 3784055 Nmul_A0678 Nitrosospira multiformis ATCC 25196 transcriptional regulator-like protein YP_411377.1 776976 D 323848 CDS YP_411378.1 82701812 3784056 777961..779508 1 NC_007614.1 cytochrome c peroxidase 779508 3784056 Nmul_A0679 Nitrosospira multiformis ATCC 25196 cytochrome c peroxidase YP_411378.1 777961 D 323848 CDS YP_411379.1 82701813 3784057 779609..780658 1 NC_007614.1 UTP-glucose-1-phosphate uridylyltransferase 780658 3784057 Nmul_A0680 Nitrosospira multiformis ATCC 25196 UTP-glucose-1-phosphate uridylyltransferase YP_411379.1 779609 D 323848 CDS YP_411380.1 82701814 3784058 complement(780870..781739) 1 NC_007614.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 781739 psd 3784058 psd Nitrosospira multiformis ATCC 25196 phosphatidylserine decarboxylase YP_411380.1 780870 R 323848 CDS YP_411381.1 82701815 3784059 complement(781869..783689) 1 NC_007614.1 ABC transporter-like protein 783689 3784059 Nmul_A0682 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_411381.1 781869 R 323848 CDS YP_411382.1 82701816 3784060 784053..785252 1 NC_007614.1 hypothetical protein 785252 3784060 Nmul_A0683 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411382.1 784053 D 323848 CDS YP_411383.1 82701817 3784061 complement(785587..786549) 1 NC_007614.1 AAA ATPase 786549 3784061 Nmul_A0684 Nitrosospira multiformis ATCC 25196 AAA ATPase YP_411383.1 785587 R 323848 CDS YP_411384.1 82701818 3784062 complement(786731..787165) 1 NC_007614.1 ribulose-bisphosphate carboxylase 787165 3784062 Nmul_A0685 Nitrosospira multiformis ATCC 25196 ribulose-bisphosphate carboxylase YP_411384.1 786731 R 323848 CDS YP_411385.1 82701819 3784063 complement(787189..788658) 1 NC_007614.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 788658 rbcL 3784063 rbcL Nitrosospira multiformis ATCC 25196 ribulose bisophosphate carboxylase YP_411385.1 787189 R 323848 CDS YP_411386.1 82701820 3784064 788802..789737 1 NC_007614.1 LysR family transcriptional regulator 789737 3784064 Nmul_A0687 Nitrosospira multiformis ATCC 25196 LysR family transcriptional regulator YP_411386.1 788802 D 323848 CDS YP_411387.1 82701821 3784065 complement(789801..792974) 1 NC_007614.1 hydrophobe/amphiphile efflux-1 protein 792974 3784065 Nmul_A0688 Nitrosospira multiformis ATCC 25196 hydrophobe/amphiphile efflux-1 protein YP_411387.1 789801 R 323848 CDS YP_411388.1 82701822 3784066 complement(792971..794206) 1 NC_007614.1 secretion protein HlyD 794206 3784066 Nmul_A0689 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_411388.1 792971 R 323848 CDS YP_411389.1 82701823 3784067 complement(794331..795755) 1 NC_007614.1 RND efflux system outer membrane lipoprotein NodT 795755 3784067 Nmul_A0690 Nitrosospira multiformis ATCC 25196 RND efflux system outer membrane lipoprotein NodT YP_411389.1 794331 R 323848 CDS YP_411390.1 82701824 3786153 complement(795752..798868) 1 NC_007614.1 hydrophobe/amphiphile efflux-1 protein 798868 3786153 Nmul_A0691 Nitrosospira multiformis ATCC 25196 hydrophobe/amphiphile efflux-1 protein YP_411390.1 795752 R 323848 CDS YP_411391.1 82701825 3786154 complement(798903..800141) 1 NC_007614.1 secretion protein HlyD 800141 3786154 Nmul_A0692 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_411391.1 798903 R 323848 CDS YP_411392.1 82701826 3786155 800237..800860 1 NC_007614.1 TetR family transcriptional regulator 800860 3786155 Nmul_A0693 Nitrosospira multiformis ATCC 25196 TetR family transcriptional regulator YP_411392.1 800237 D 323848 CDS YP_411393.1 82701827 3786156 801292..801810 1 NC_007614.1 BadM/Rrf2 family transcriptional regulator 801810 3786156 Nmul_A0694 Nitrosospira multiformis ATCC 25196 BadM/Rrf2 family transcriptional regulator YP_411393.1 801292 D 323848 CDS YP_411394.1 82701828 3786157 801879..802223 1 NC_007614.1 HesB/YadR/YfhF 802223 3786157 Nmul_A0695 Nitrosospira multiformis ATCC 25196 HesB/YadR/YfhF YP_411394.1 801879 D 323848 CDS YP_411395.1 82701829 3786158 802337..803773 1 NC_007614.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 803773 3786158 Nmul_A0696 Nitrosospira multiformis ATCC 25196 cysteine desulfurase activator complex subunit SufB YP_411395.1 802337 D 323848 CDS YP_411396.1 82701830 3786159 803770..804558 1 NC_007614.1 FeS assembly ATPase SufC 804558 3786159 Nmul_A0697 Nitrosospira multiformis ATCC 25196 FeS assembly ATPase SufC YP_411396.1 803770 D 323848 CDS YP_411397.1 82701831 3786160 804555..805877 1 NC_007614.1 FeS assembly protein SufD 805877 3786160 Nmul_A0698 Nitrosospira multiformis ATCC 25196 FeS assembly protein SufD YP_411397.1 804555 D 323848 CDS YP_411398.1 82701832 3786161 805874..807133 1 NC_007614.1 SufS subfamily cysteine desulfurase 807133 3786161 Nmul_A0699 Nitrosospira multiformis ATCC 25196 SufS subfamily cysteine desulfurase YP_411398.1 805874 D 323848 CDS YP_411399.1 82701833 3786162 807133..807615 1 NC_007614.1 SUF system FeS assembly protein 807615 3786162 Nmul_A0700 Nitrosospira multiformis ATCC 25196 SUF system FeS assembly protein YP_411399.1 807133 D 323848 CDS YP_411400.1 82701834 3786163 807638..808198 1 NC_007614.1 nitrogen-fixing NifU-like 808198 3786163 Nmul_A0701 Nitrosospira multiformis ATCC 25196 nitrogen-fixing NifU-like YP_411400.1 807638 D 323848 CDS YP_411401.1 82701835 3786164 808441..808854 1 NC_007614.1 hypothetical protein 808854 3786164 Nmul_A0702 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411401.1 808441 D 323848 CDS YP_411402.1 82701836 3786165 808956..810056 1 NC_007614.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 810056 aroB 3786165 aroB Nitrosospira multiformis ATCC 25196 3-dehydroquinate synthase YP_411402.1 808956 D 323848 CDS YP_411403.1 82701837 3786166 810049..811170 1 NC_007614.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 811170 3786166 Nmul_A0704 Nitrosospira multiformis ATCC 25196 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_411403.1 810049 D 323848 CDS YP_411404.1 82701838 3786167 811376..812473 1 NC_007614.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 812473 hemE 3786167 hemE Nitrosospira multiformis ATCC 25196 uroporphyrinogen decarboxylase YP_411404.1 811376 D 323848 CDS YP_411405.1 82701839 3786168 812535..813236 1 NC_007614.1 two component transcriptional regulator 813236 3786168 Nmul_A0706 Nitrosospira multiformis ATCC 25196 two component transcriptional regulator YP_411405.1 812535 D 323848 CDS YP_411406.1 82701840 3786169 813223..814491 1 NC_007614.1 periplasmic sensor signal transduction histidine kinase 814491 3786169 Nmul_A0707 Nitrosospira multiformis ATCC 25196 periplasmic sensor signal transduction histidine kinase YP_411406.1 813223 D 323848 CDS YP_411407.1 82701841 3786170 814881..817628 1 NC_007614.1 hypothetical protein 817628 3786170 Nmul_A0708 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411407.1 814881 D 323848 CDS YP_411408.1 82701842 3786171 817625..819517 1 NC_007614.1 NADH dehydrogenase (quinone) 819517 3786171 Nmul_A0709 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase (quinone) YP_411408.1 817625 D 323848 CDS YP_411409.1 82701843 3786056 820197..821858 1 NC_007614.1 sulfate transporter 821858 3786056 Nmul_A0710 Nitrosospira multiformis ATCC 25196 sulfate transporter YP_411409.1 820197 D 323848 CDS YP_411410.1 82701844 3786057 complement(822030..822971) 1 NC_007614.1 GTPase EngC 822971 3786057 Nmul_A0711 Nitrosospira multiformis ATCC 25196 GTPase EngC YP_411410.1 822030 R 323848 CDS YP_411411.1 82701845 3786058 complement(822968..823309) 1 NC_007614.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 823309 phhB 3786058 phhB Nitrosospira multiformis ATCC 25196 pterin-4-alpha-carbinolamine dehydratase YP_411411.1 822968 R 323848 CDS YP_411412.1 82701846 3786059 complement(823341..824597) 1 NC_007614.1 Ste24 endopeptidase 824597 3786059 Nmul_A0713 Nitrosospira multiformis ATCC 25196 Ste24 endopeptidase YP_411412.1 823341 R 323848 CDS YP_411413.1 82701847 3786060 824704..825258 1 NC_007614.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 825258 3786060 Nmul_A0714 Nitrosospira multiformis ATCC 25196 oligoribonuclease YP_411413.1 824704 D 323848 CDS YP_411414.1 82701848 3786061 825340..827898 1 NC_007614.1 alpha-glucan phosphorylase 827898 3786061 Nmul_A0715 Nitrosospira multiformis ATCC 25196 alpha-glucan phosphorylase YP_411414.1 825340 D 323848 CDS YP_411415.1 82701849 3786062 complement(827973..829463) 1 NC_007614.1 glycogen/starch synthase, ADP-glucose type 829463 3786062 Nmul_A0716 Nitrosospira multiformis ATCC 25196 glycogen/starch synthase, ADP-glucose type YP_411415.1 827973 R 323848 CDS YP_411416.1 82701850 3786063 complement(829681..831921) 1 NC_007614.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 831921 3786063 Nmul_A0717 Nitrosospira multiformis ATCC 25196 glycogen branching enzyme YP_411416.1 829681 R 323848 CDS YP_411417.1 82701851 3786064 832902..834179 1 NC_007614.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 834179 glgC 3786064 glgC Nitrosospira multiformis ATCC 25196 glucose-1-phosphate adenylyltransferase YP_411417.1 832902 D 323848 CDS YP_411418.1 82701852 3786065 834224..835924 1 NC_007614.1 glycoside hydrolase family protein 835924 3786065 Nmul_A0719 Nitrosospira multiformis ATCC 25196 glycoside hydrolase family protein YP_411418.1 834224 D 323848 CDS YP_411419.1 82701853 3786066 complement(836084..836497) 1 NC_007614.1 hypothetical protein 836497 3786066 Nmul_A0720 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411419.1 836084 R 323848 CDS YP_411420.1 82701854 3786067 837023..837346 1 NC_007614.1 4Fe-4S ferredoxin 837346 3786067 Nmul_A0721 Nitrosospira multiformis ATCC 25196 4Fe-4S ferredoxin YP_411420.1 837023 D 323848 CDS YP_411421.1 82701855 3786068 837372..840164 1 NC_007614.1 hypothetical protein 840164 3786068 Nmul_A0722 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411421.1 837372 D 323848 CDS YP_411422.1 82701856 3786069 840161..843751 1 NC_007614.1 UvrD/REP helicase 843751 3786069 Nmul_A0723 Nitrosospira multiformis ATCC 25196 UvrD/REP helicase YP_411422.1 840161 D 323848 CDS YP_411423.1 82701857 3786070 843873..844961 1 NC_007614.1 lytic murein transglycosylase B 844961 3786070 Nmul_A0724 Nitrosospira multiformis ATCC 25196 lytic murein transglycosylase B YP_411423.1 843873 D 323848 CDS YP_411424.1 82701858 3786071 845087..846061 1 NC_007614.1 glycosyl transferase family protein 846061 3786071 Nmul_A0725 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_411424.1 845087 D 323848 CDS YP_411425.1 82701859 3786072 complement(846111..846899) 1 NC_007614.1 GCN5-like N-acetyltransferase 846899 3786072 Nmul_A0726 Nitrosospira multiformis ATCC 25196 GCN5-like N-acetyltransferase YP_411425.1 846111 R 323848 CDS YP_411426.1 82701860 3786073 847284..848714 1 NC_007614.1 putative signal transduction histidine kinase 848714 3786073 Nmul_A0727 Nitrosospira multiformis ATCC 25196 putative signal transduction histidine kinase YP_411426.1 847284 D 323848 CDS YP_411427.1 82701861 3786074 848727..849380 1 NC_007614.1 two component LuxR family transcriptional regulator 849380 3786074 Nmul_A0728 Nitrosospira multiformis ATCC 25196 two component LuxR family transcriptional regulator YP_411427.1 848727 D 323848 CDS YP_411428.1 82701862 3786075 849548..850006 1 NC_007614.1 hypothetical protein 850006 3786075 Nmul_A0729 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411428.1 849548 D 323848 CDS YP_411429.1 82701863 3786554 complement(850276..851349) 1 NC_007614.1 ABC transporter-like protein 851349 3786554 Nmul_A0730 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_411429.1 850276 R 323848 CDS YP_411430.1 82701864 3786555 complement(851376..853079) 1 NC_007614.1 binding-protein dependent transport system inner membrane protein 853079 3786555 Nmul_A0731 Nitrosospira multiformis ATCC 25196 binding-protein dependent transport system inner membrane protein YP_411430.1 851376 R 323848 CDS YP_411431.1 82701865 3786556 complement(853102..854115) 1 NC_007614.1 extracellular solute-binding protein 854115 3786556 Nmul_A0732 Nitrosospira multiformis ATCC 25196 extracellular solute-binding protein YP_411431.1 853102 R 323848 CDS YP_411432.1 82701866 3786557 854198..854476 1 NC_007614.1 hypothetical protein 854476 3786557 Nmul_A0733 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411432.1 854198 D 323848 CDS YP_411433.1 82701867 3786558 854569..854889 1 NC_007614.1 hypothetical protein 854889 3786558 Nmul_A0734 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411433.1 854569 D 323848 CDS YP_411434.1 82701868 3786559 complement(854945..855646) 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 855646 3786559 Nmul_A0735 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_411434.1 854945 R 323848 CDS YP_411435.1 82701869 3786560 855887..856705 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 856705 3786560 Nmul_A0736 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_411435.1 855887 D 323848 CDS YP_411436.1 82701870 3786561 complement(857033..858103) 1 NC_007614.1 hypothetical protein 858103 3786561 Nmul_A0737 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411436.1 857033 R 323848 CDS YP_411437.1 82701871 3786562 complement(858436..858846) 1 NC_007614.1 hypothetical protein 858846 3786562 Nmul_A0738 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411437.1 858436 R 323848 CDS YP_411438.1 82701872 3786563 complement(858935..860968) 1 NC_007614.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 860968 hppA 3786563 hppA Nitrosospira multiformis ATCC 25196 membrane-bound proton-translocating pyrophosphatase YP_411438.1 858935 R 323848 CDS YP_411439.1 82701873 3786564 complement(861132..862391) 1 NC_007614.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 862391 3786564 Nmul_A0740 Nitrosospira multiformis ATCC 25196 6-phosphofructokinase YP_411439.1 861132 R 323848 CDS YP_411440.1 82701874 3786565 complement(862582..863220) 1 NC_007614.1 adenylate kinase 863220 3786565 Nmul_A0741 Nitrosospira multiformis ATCC 25196 adenylate kinase YP_411440.1 862582 R 323848 CDS YP_411441.1 82701875 3786566 complement(863347..866127) 1 NC_007614.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 866127 valS 3786566 valS Nitrosospira multiformis ATCC 25196 valyl-tRNA synthetase YP_411441.1 863347 R 323848 CDS YP_411442.1 82701876 3786567 866878..867939 1 NC_007614.1 hypothetical protein 867939 3786567 Nmul_A0743 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411442.1 866878 D 323848 CDS YP_411443.1 82701877 3786568 complement(868194..868601) 1 NC_007614.1 hypothetical protein 868601 3786568 Nmul_A0744 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411443.1 868194 R 323848 CDS YP_411444.1 82701878 3786569 complement(868688..869110) 1 NC_007614.1 DNA polymerase III chi subunit, HolC 869110 3786569 Nmul_A0745 Nitrosospira multiformis ATCC 25196 DNA polymerase III chi subunit, HolC YP_411444.1 868688 R 323848 CDS YP_411445.1 82701879 3786570 complement(869107..870663) 1 NC_007614.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 870663 3786570 Nmul_A0746 Nitrosospira multiformis ATCC 25196 leucyl aminopeptidase YP_411445.1 869107 R 323848 CDS YP_411446.1 82701880 3786571 870855..871358 1 NC_007614.1 methylated-DNA--protein-cysteine methyltransferase 871358 3786571 Nmul_A0747 Nitrosospira multiformis ATCC 25196 methylated-DNA--protein-cysteine methyltransferase YP_411446.1 870855 D 323848 CDS YP_411447.1 82701881 3786572 871345..872256 1 NC_007614.1 tyrosine recombinase XerD 872256 3786572 Nmul_A0748 Nitrosospira multiformis ATCC 25196 tyrosine recombinase XerD YP_411447.1 871345 D 323848 CDS YP_411448.1 82701882 3786481 872523..873200 1 NC_007614.1 OmpA/MotB 873200 3786481 Nmul_A0749 Nitrosospira multiformis ATCC 25196 OmpA/MotB YP_411448.1 872523 D 323848 CDS YP_411449.1 82701883 3786482 complement(873363..873839) 1 NC_007614.1 hypothetical protein 873839 3786482 Nmul_A0750 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411449.1 873363 R 323848 CDS YP_411450.1 82701884 3786483 874004..874465 1 NC_007614.1 FKBP-type peptidylprolyl isomerase 874465 3786483 Nmul_A0751 Nitrosospira multiformis ATCC 25196 FKBP-type peptidylprolyl isomerase YP_411450.1 874004 D 323848 CDS YP_411451.1 82701885 3786487 875181..876371 1 NC_007614.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 876371 3786487 Nmul_A0752 Nitrosospira multiformis ATCC 25196 elongation factor Tu YP_411451.1 875181 D 323848 CDS YP_411452.1 82701886 3786489 876704..877048 1 NC_007614.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 877048 secE 3786489 secE Nitrosospira multiformis ATCC 25196 preprotein translocase subunit SecE YP_411452.1 876704 D 323848 CDS YP_411453.1 82701887 3786490 877048..877581 1 NC_007614.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 877581 nusG 3786490 nusG Nitrosospira multiformis ATCC 25196 transcription antitermination protein NusG YP_411453.1 877048 D 323848 CDS YP_411454.1 82701888 3786491 877680..878111 1 NC_007614.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 878111 rplK 3786491 rplK Nitrosospira multiformis ATCC 25196 50S ribosomal protein L11 YP_411454.1 877680 D 323848 CDS YP_411455.1 82701889 3786492 878113..878805 1 NC_007614.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 878805 rplA 3786492 rplA Nitrosospira multiformis ATCC 25196 50S ribosomal protein L1 YP_411455.1 878113 D 323848 CDS YP_411456.1 82701890 3786493 879229..879753 1 NC_007614.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 879753 rplJ 3786493 rplJ Nitrosospira multiformis ATCC 25196 50S ribosomal protein L10 YP_411456.1 879229 D 323848 CDS YP_411457.1 82701891 3786494 879832..880212 1 NC_007614.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 880212 rplL 3786494 rplL Nitrosospira multiformis ATCC 25196 50S ribosomal protein L7/L12 YP_411457.1 879832 D 323848 CDS YP_411458.1 82701892 3786495 880380..884453 1 NC_007614.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 884453 rpoB 3786495 rpoB Nitrosospira multiformis ATCC 25196 DNA-directed RNA polymerase subunit beta YP_411458.1 880380 D 323848 CDS YP_411459.1 82701893 3785213 884561..888787 1 NC_007614.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 888787 3785213 Nmul_A0760 Nitrosospira multiformis ATCC 25196 DNA-directed RNA polymerase subunit beta' YP_411459.1 884561 D 323848 CDS YP_411460.1 82701894 3785214 888877..890286 1 NC_007614.1 class III aminotransferase 890286 3785214 Nmul_A0761 Nitrosospira multiformis ATCC 25196 class III aminotransferase YP_411460.1 888877 D 323848 CDS YP_411461.1 82701895 3785215 890742..891119 1 NC_007614.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 891119 rpsL 3785215 rpsL Nitrosospira multiformis ATCC 25196 30S ribosomal protein S12 YP_411461.1 890742 D 323848 CDS YP_411462.1 82701896 3785216 891206..891676 1 NC_007614.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 891676 3785216 Nmul_A0763 Nitrosospira multiformis ATCC 25196 30S ribosomal protein S7 YP_411462.1 891206 D 323848 CDS YP_411463.1 82701897 3785217 891807..893897 1 NC_007614.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 893897 3785217 Nmul_A0764 Nitrosospira multiformis ATCC 25196 elongation factor G YP_411463.1 891807 D 323848 CDS YP_411464.1 82701898 3785218 893921..895111 1 NC_007614.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 895111 3785218 Nmul_A0765 Nitrosospira multiformis ATCC 25196 elongation factor Tu YP_411464.1 893921 D 323848 CDS YP_411465.1 82701899 3785219 895195..895503 1 NC_007614.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 895503 rpsJ 3785219 rpsJ Nitrosospira multiformis ATCC 25196 30S ribosomal protein S10 YP_411465.1 895195 D 323848 CDS YP_411466.1 82701900 3785220 895615..896325 1 NC_007614.1 50S ribosomal protein L3 896325 3785220 Nmul_A0767 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L3 YP_411466.1 895615 D 323848 CDS YP_411467.1 82701901 3785221 896325..896945 1 NC_007614.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 896945 rplD 3785221 rplD Nitrosospira multiformis ATCC 25196 50S ribosomal protein L4 YP_411467.1 896325 D 323848 CDS YP_411468.1 82701902 3785222 896942..897277 1 NC_007614.1 50S ribosomal protein L23 897277 3785222 Nmul_A0769 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L23 YP_411468.1 896942 D 323848 CDS YP_411469.1 82701903 3785223 897277..898110 1 NC_007614.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 898110 rplB 3785223 rplB Nitrosospira multiformis ATCC 25196 50S ribosomal protein L2 YP_411469.1 897277 D 323848 CDS YP_411470.1 82701904 3785224 898117..898398 1 NC_007614.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 898398 rpsS 3785224 rpsS Nitrosospira multiformis ATCC 25196 30S ribosomal protein S19 YP_411470.1 898117 D 323848 CDS YP_411471.1 82701905 3785225 898410..898757 1 NC_007614.1 50S ribosomal protein L22 898757 3785225 Nmul_A0772 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L22 YP_411471.1 898410 D 323848 CDS YP_411472.1 82701906 3785226 898773..899633 1 NC_007614.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 899633 rpsC 3785226 rpsC Nitrosospira multiformis ATCC 25196 30S ribosomal protein S3 YP_411472.1 898773 D 323848 CDS YP_411473.1 82701907 3785227 899617..900033 1 NC_007614.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 900033 rplP 3785227 rplP Nitrosospira multiformis ATCC 25196 50S ribosomal protein L16 YP_411473.1 899617 D 323848 CDS YP_411474.1 82701908 3785228 900036..900236 1 NC_007614.1 50S ribosomal protein L29 900236 3785228 Nmul_A0775 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L29 YP_411474.1 900036 D 323848 CDS YP_411475.1 82701909 3785229 900233..900499 1 NC_007614.1 30S ribosomal protein S17 900499 3785229 Nmul_A0776 Nitrosospira multiformis ATCC 25196 30S ribosomal protein S17 YP_411475.1 900233 D 323848 CDS YP_411476.1 82701910 3785230 900697..901065 1 NC_007614.1 50S ribosomal protein L14 901065 3785230 Nmul_A0777 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L14 YP_411476.1 900697 D 323848 CDS YP_411477.1 82701911 3785231 901088..901405 1 NC_007614.1 50S ribosomal protein L24 901405 3785231 Nmul_A0778 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L24 YP_411477.1 901088 D 323848 CDS YP_411478.1 82701912 3785232 901423..901962 1 NC_007614.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 901962 rplE 3785232 rplE Nitrosospira multiformis ATCC 25196 50S ribosomal protein L5 YP_411478.1 901423 D 323848 CDS YP_411479.1 82701913 3785233 901969..902274 1 NC_007614.1 30S ribosomal protein S14 902274 3785233 Nmul_A0780 Nitrosospira multiformis ATCC 25196 30S ribosomal protein S14 YP_411479.1 901969 D 323848 CDS YP_411480.1 82701914 3785234 902421..902816 1 NC_007614.1 30S ribosomal protein S8 902816 3785234 Nmul_A0781 Nitrosospira multiformis ATCC 25196 30S ribosomal protein S8 YP_411480.1 902421 D 323848 CDS YP_411481.1 82701915 3785235 902828..903361 1 NC_007614.1 50S ribosomal protein L6 903361 3785235 Nmul_A0782 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L6 YP_411481.1 902828 D 323848 CDS YP_411482.1 82701916 3785236 903373..903729 1 NC_007614.1 50S ribosomal protein L18 903729 3785236 Nmul_A0783 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L18 YP_411482.1 903373 D 323848 CDS YP_411483.1 82701917 3785237 903750..904292 1 NC_007614.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 904292 rpsE 3785237 rpsE Nitrosospira multiformis ATCC 25196 30S ribosomal protein S5 YP_411483.1 903750 D 323848 CDS YP_411484.1 82701918 3785238 904289..904477 1 NC_007614.1 50S ribosomal protein L30 904477 3785238 Nmul_A0785 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L30 YP_411484.1 904289 D 323848 CDS YP_411485.1 82701919 3785239 904478..904909 1 NC_007614.1 50S ribosomal protein L15 904909 3785239 Nmul_A0786 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L15 YP_411485.1 904478 D 323848 CDS YP_411486.1 82701920 3785240 904927..906255 1 NC_007614.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 906255 secY 3785240 secY Nitrosospira multiformis ATCC 25196 preprotein translocase subunit SecY YP_411486.1 904927 D 323848 CDS YP_411487.1 82701921 3785241 906274..906492 1 NC_007614.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 906492 infA 3785241 infA Nitrosospira multiformis ATCC 25196 translation initiation factor IF-1 YP_411487.1 906274 D 323848 CDS YP_411488.1 82701922 3785242 906676..907053 1 NC_007614.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 907053 rpsM 3785242 rpsM Nitrosospira multiformis ATCC 25196 30S ribosomal protein S13 YP_411488.1 906676 D 323848 CDS YP_411489.1 82701923 3785243 907099..907488 1 NC_007614.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 907488 3785243 Nmul_A0790 Nitrosospira multiformis ATCC 25196 30S ribosomal protein S11 YP_411489.1 907099 D 323848 CDS YP_411490.1 82701924 3785244 907498..908124 1 NC_007614.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 908124 rpsD 3785244 rpsD Nitrosospira multiformis ATCC 25196 30S ribosomal protein S4 YP_411490.1 907498 D 323848 CDS YP_411491.1 82701925 3785245 908158..909162 1 NC_007614.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 909162 3785245 Nmul_A0792 Nitrosospira multiformis ATCC 25196 DNA-directed RNA polymerase subunit alpha YP_411491.1 908158 D 323848 CDS YP_411492.1 82701926 3785246 909149..909544 1 NC_007614.1 50S ribosomal protein L17 909544 3785246 Nmul_A0793 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L17 YP_411492.1 909149 D 323848 CDS YP_411493.1 82701927 3785247 909749..910108 1 NC_007614.1 hypothetical protein 910108 3785247 Nmul_A0794 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411493.1 909749 D 323848 CDS YP_411494.1 82701928 3785248 910168..910629 1 NC_007614.1 hypothetical protein 910629 3785248 Nmul_A0795 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411494.1 910168 D 323848 CDS YP_411495.1 82701929 3785249 complement(910651..911808) 1 NC_007614.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 911808 3785249 Nmul_A0796 Nitrosospira multiformis ATCC 25196 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_411495.1 910651 R 323848 CDS YP_411496.1 82701930 3785250 complement(911952..912863) 1 NC_007614.1 glutamate--tRNA ligase 912863 3785250 Nmul_A0797 Nitrosospira multiformis ATCC 25196 glutamate--tRNA ligase YP_411496.1 911952 R 323848 CDS YP_411497.1 82701931 3785251 913519..914349 1 NC_007614.1 ammonia monooxygenase/methane monooxygenase subunit C 914349 3785251 Nmul_A0798 Nitrosospira multiformis ATCC 25196 ammonia monooxygenase/methane monooxygenase subunit C YP_411497.1 913519 D 323848 CDS YP_411498.1 82701932 3785843 914673..915497 1 NC_007614.1 ammonia monooxygenase 915497 3785843 Nmul_A0799 Nitrosospira multiformis ATCC 25196 ammonia monooxygenase YP_411498.1 914673 D 323848 CDS YP_411499.1 82701933 3785844 915498..916742 1 NC_007614.1 monooxygenase subunit B protein 916742 3785844 Nmul_A0800 Nitrosospira multiformis ATCC 25196 monooxygenase subunit B protein YP_411499.1 915498 D 323848 CDS YP_411500.1 82701934 3785845 complement(917121..918647) 1 NC_007614.1 regulatory protein GntR 918647 3785845 Nmul_A0801 Nitrosospira multiformis ATCC 25196 regulatory protein GntR YP_411500.1 917121 R 323848 CDS YP_411501.1 82701935 3785846 complement(918806..919408) 1 NC_007614.1 NapC/NirT cytochrome c-like protein 919408 3785846 Nmul_A0802 Nitrosospira multiformis ATCC 25196 NapC/NirT cytochrome c-like protein YP_411501.1 918806 R 323848 CDS YP_411502.1 82701936 3785847 complement(919410..920117) 1 NC_007614.1 cytochrome c-554 920117 3785847 Nmul_A0803 Nitrosospira multiformis ATCC 25196 cytochrome c-554 YP_411502.1 919410 R 323848 CDS YP_411503.1 82701937 3785848 complement(920994..922109) 1 NC_007614.1 hypothetical protein 922109 3785848 Nmul_A0804 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411503.1 920994 R 323848 CDS YP_411504.1 82701938 3785849 complement(922142..923854) 1 NC_007614.1 hydroxylamine oxidase 923854 3785849 Nmul_A0805 Nitrosospira multiformis ATCC 25196 hydroxylamine oxidase YP_411504.1 922142 R 323848 CDS YP_411505.1 82701939 3785850 complement(924135..924884) 1 NC_007614.1 hypothetical protein 924884 3785850 Nmul_A0806 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411505.1 924135 R 323848 CDS YP_411506.1 82701940 3785851 924964..926160 1 NC_007614.1 peptidase S1 and S6, chymotrypsin/Hap 926160 3785851 Nmul_A0807 Nitrosospira multiformis ATCC 25196 peptidase S1 and S6, chymotrypsin/Hap YP_411506.1 924964 D 323848 CDS YP_411507.1 82701941 3785852 complement(926249..927049) 1 NC_007614.1 Sec-independent protein translocase TatC 927049 3785852 Nmul_A0808 Nitrosospira multiformis ATCC 25196 Sec-independent protein translocase TatC YP_411507.1 926249 R 323848 CDS YP_411508.1 82701942 3785853 complement(927177..927620) 1 NC_007614.1 twin-arginine translocation protein TatB 927620 3785853 Nmul_A0809 Nitrosospira multiformis ATCC 25196 twin-arginine translocation protein TatB YP_411508.1 927177 R 323848 CDS YP_411509.1 82701943 3785854 complement(927710..927934) 1 NC_007614.1 twin arginine-targeting protein translocase 927934 3785854 Nmul_A0810 Nitrosospira multiformis ATCC 25196 twin arginine-targeting protein translocase YP_411509.1 927710 R 323848 CDS YP_411510.1 82701944 3785855 complement(927972..928325) 1 NC_007614.1 histidine triad (HIT) protein 928325 3785855 Nmul_A0811 Nitrosospira multiformis ATCC 25196 histidine triad (HIT) protein YP_411510.1 927972 R 323848 CDS YP_411511.1 82701945 3785856 complement(928326..928691) 1 NC_007614.1 phosphoribosyl-ATP pyrophosphohydrolase 928691 3785856 Nmul_A0812 Nitrosospira multiformis ATCC 25196 phosphoribosyl-ATP pyrophosphohydrolase YP_411511.1 928326 R 323848 CDS YP_411512.1 82701946 3785857 complement(928688..929080) 1 NC_007614.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 929080 hisI 3785857 hisI Nitrosospira multiformis ATCC 25196 phosphoribosyl-AMP cyclohydrolase YP_411512.1 928688 R 323848 CDS YP_411513.1 82701947 3785858 complement(929112..929870) 1 NC_007614.1 imidazoleglycerol phosphate synthase, cyclase subunit 929870 3785858 Nmul_A0814 Nitrosospira multiformis ATCC 25196 imidazoleglycerol phosphate synthase, cyclase subunit YP_411513.1 929112 R 323848 CDS YP_411514.1 82701948 3785859 complement(930104..930877) 1 NC_007614.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 930877 3785859 Nmul_A0815 Nitrosospira multiformis ATCC 25196 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_411514.1 930104 R 323848 CDS YP_411515.1 82701949 3785860 complement(930942..931580) 1 NC_007614.1 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 931580 3785860 Nmul_A0816 Nitrosospira multiformis ATCC 25196 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_411515.1 930942 R 323848 CDS YP_411516.1 82701950 3785861 complement(931604..932191) 1 NC_007614.1 imidazoleglycerol-phosphate dehydratase 932191 3785861 Nmul_A0817 Nitrosospira multiformis ATCC 25196 imidazoleglycerol-phosphate dehydratase YP_411516.1 931604 R 323848 CDS YP_411517.1 82701951 3785862 complement(932249..933355) 1 NC_007614.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 933355 3785862 Nmul_A0818 Nitrosospira multiformis ATCC 25196 histidinol-phosphate aminotransferase YP_411517.1 932249 R 323848 CDS YP_411518.1 82701952 3786688 complement(933606..934928) 1 NC_007614.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 934928 hisD 3786688 hisD Nitrosospira multiformis ATCC 25196 histidinol dehydrogenase YP_411518.1 933606 R 323848 CDS YP_411519.1 82701953 3786689 complement(934988..935671) 1 NC_007614.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 935671 hisG 3786689 hisG Nitrosospira multiformis ATCC 25196 ATP phosphoribosyltransferase catalytic subunit YP_411519.1 934988 R 323848 CDS YP_411520.1 82701954 3786690 936068..937192 1 NC_007614.1 hypothetical protein 937192 3786690 Nmul_A0821 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411520.1 936068 D 323848 CDS YP_411521.1 82701955 3786691 937236..937886 1 NC_007614.1 hypothetical protein 937886 3786691 Nmul_A0822 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411521.1 937236 D 323848 CDS YP_411522.1 82701956 3786692 938470..938934 1 NC_007614.1 response regulator receiver domain-containing protein 938934 3786692 Nmul_A0823 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_411522.1 938470 D 323848 CDS YP_411523.1 82701957 3786694 complement(939667..939993) 1 NC_007614.1 hypothetical protein 939993 3786694 Nmul_A0825 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411523.1 939667 R 323848 CDS YP_411524.1 82701958 3786695 940182..940466 1 NC_007614.1 response regulator receiver domain-containing protein 940466 3786695 Nmul_A0826 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_411524.1 940182 D 323848 CDS YP_411525.1 82701959 3786697 941374..943491 1 NC_007614.1 diguanylate cyclase/phosphodiesterase 943491 3786697 Nmul_A0828 Nitrosospira multiformis ATCC 25196 diguanylate cyclase/phosphodiesterase YP_411525.1 941374 D 323848 CDS YP_411526.1 82701960 3786698 complement(944485..944952) 1 NC_007614.1 response regulator receiver domain-containing protein 944952 3786698 Nmul_A0829 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_411526.1 944485 R 323848 CDS YP_411527.1 82701961 3786699 945279..945812 1 NC_007614.1 transposase IS4 945812 3786699 Nmul_A0830 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_411527.1 945279 D 323848 CDS YP_411528.1 82701962 3786700 complement(945956..946723) 1 NC_007614.1 cyclic nucleotide-binding protein domain-containing protein 946723 3786700 Nmul_A0831 Nitrosospira multiformis ATCC 25196 cyclic nucleotide-binding protein domain-containing protein YP_411528.1 945956 R 323848 CDS YP_411529.1 82701963 3786701 complement(948416..949567) 1 NC_007614.1 histidine kinase 949567 3786701 Nmul_A0832 Nitrosospira multiformis ATCC 25196 histidine kinase YP_411529.1 948416 R 323848 CDS YP_411530.1 82701964 3786702 950025..950384 1 NC_007614.1 hypothetical protein 950384 3786702 Nmul_A0833 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411530.1 950025 D 323848 CDS YP_411531.1 82701965 3786703 complement(951191..951448) 1 NC_007614.1 hypothetical protein 951448 3786703 Nmul_A0834 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411531.1 951191 R 323848 CDS YP_411532.1 82701966 3786704 complement(951445..951720) 1 NC_007614.1 hypothetical protein 951720 3786704 Nmul_A0835 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411532.1 951445 R 323848 CDS YP_411533.1 82701967 3786705 complement(951751..951978) 1 NC_007614.1 IS4 family transposase 951978 3786705 Nmul_A0836 Nitrosospira multiformis ATCC 25196 IS4 family transposase YP_411533.1 951751 R 323848 CDS YP_411534.1 82701968 3786706 952070..952438 1 NC_007614.1 transposase 952438 3786706 Nmul_A0837 Nitrosospira multiformis ATCC 25196 transposase YP_411534.1 952070 D 323848 CDS YP_411535.1 82701969 3784526 952480..952827 1 NC_007614.1 transposase IS4 952827 3784526 Nmul_A0838 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_411535.1 952480 D 323848 CDS YP_411536.1 82701970 3784527 953090..953755 1 NC_007614.1 hemolysin III family channel protein 953755 3784527 Nmul_A0839 Nitrosospira multiformis ATCC 25196 hemolysin III family channel protein YP_411536.1 953090 D 323848 CDS YP_411537.1 82701971 3784528 953928..954137 1 NC_007614.1 cold-shock DNA-binding domain-containing protein 954137 3784528 Nmul_A0840 Nitrosospira multiformis ATCC 25196 cold-shock DNA-binding domain-containing protein YP_411537.1 953928 D 323848 CDS YP_411538.1 82701972 3784529 complement(954567..954773) 1 NC_007614.1 hypothetical protein 954773 3784529 Nmul_A0841 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411538.1 954567 R 323848 CDS YP_411539.1 82701973 3784531 complement(955607..956614) 1 NC_007614.1 hypothetical protein 956614 3784531 Nmul_A0843 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411539.1 955607 R 323848 CDS YP_411540.1 82701974 3784532 complement(956922..957863) 1 NC_007614.1 peptidase S8/S53 subtilisin kexin sedolisin 957863 3784532 Nmul_A0844 Nitrosospira multiformis ATCC 25196 peptidase S8/S53 subtilisin kexin sedolisin YP_411540.1 956922 R 323848 CDS YP_411541.1 82701975 3784533 959354..960139 1 NC_007614.1 proteinase inhibitor I1, Kazal 960139 3784533 Nmul_A0845 Nitrosospira multiformis ATCC 25196 proteinase inhibitor I1, Kazal YP_411541.1 959354 D 323848 CDS YP_411542.1 82701976 3784534 960269..960733 1 NC_007614.1 hypothetical protein 960733 3784534 Nmul_A0846 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411542.1 960269 D 323848 CDS YP_411543.1 82701977 3784535 960730..961497 1 NC_007614.1 hypothetical protein 961497 3784535 Nmul_A0847 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411543.1 960730 D 323848 CDS YP_411544.1 82701978 3784536 961810..962331 1 NC_007614.1 hypothetical protein 962331 3784536 Nmul_A0848 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411544.1 961810 D 323848 CDS YP_411545.1 82701979 3784537 962453..963778 1 NC_007614.1 secretion protein HlyD 963778 3784537 Nmul_A0849 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_411545.1 962453 D 323848 CDS YP_411546.1 82701980 3784538 963790..967014 1 NC_007614.1 hydrophobe/amphiphile efflux-1 protein 967014 3784538 Nmul_A0850 Nitrosospira multiformis ATCC 25196 hydrophobe/amphiphile efflux-1 protein YP_411546.1 963790 D 323848 CDS YP_411547.1 82701981 3784539 967032..968546 1 NC_007614.1 RND efflux system outer membrane lipoprotein NodT 968546 3784539 Nmul_A0851 Nitrosospira multiformis ATCC 25196 RND efflux system outer membrane lipoprotein NodT YP_411547.1 967032 D 323848 CDS YP_411548.1 82701982 3784541 969465..970760 1 NC_007614.1 peptidase M20D, amidohydrolase 970760 3784541 Nmul_A0853 Nitrosospira multiformis ATCC 25196 peptidase M20D, amidohydrolase YP_411548.1 969465 D 323848 CDS YP_411549.1 82701983 3784542 970762..971457 1 NC_007614.1 hypothetical protein 971457 3784542 Nmul_A0854 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411549.1 970762 D 323848 CDS YP_411550.1 82701984 3784543 complement(971626..973077) 1 NC_007614.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 973077 3784543 Nmul_A0855 Nitrosospira multiformis ATCC 25196 dihydrolipoamide dehydrogenase YP_411550.1 971626 R 323848 CDS YP_411551.1 82701985 3784544 complement(973164..974549) 1 NC_007614.1 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 974549 3784544 Nmul_A0856 Nitrosospira multiformis ATCC 25196 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase YP_411551.1 973164 R 323848 CDS YP_411552.1 82701986 3784545 complement(974573..977380) 1 NC_007614.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 977380 sucA 3784545 sucA Nitrosospira multiformis ATCC 25196 2-oxoglutarate dehydrogenase E1 component YP_411552.1 974573 R 323848 CDS YP_411553.1 82701987 3784428 complement(977411..978712) 1 NC_007614.1 citrate synthase I 978712 3784428 Nmul_A0858 Nitrosospira multiformis ATCC 25196 citrate synthase I YP_411553.1 977411 R 323848 CDS YP_411554.1 82701988 3784429 complement(978763..978999) 1 NC_007614.1 hypothetical protein 978999 3784429 Nmul_A0859 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411554.1 978763 R 323848 CDS YP_411555.1 82701989 3784430 complement(979008..979703) 1 NC_007614.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 979703 sdhB 3784430 sdhB Nitrosospira multiformis ATCC 25196 succinate dehydrogenase iron-sulfur subunit YP_411555.1 979008 R 323848 CDS YP_411556.1 82701990 3784431 complement(979758..981521) 1 NC_007614.1 succinate dehydrogenase, flavoprotein subunit 981521 3784431 Nmul_A0861 Nitrosospira multiformis ATCC 25196 succinate dehydrogenase, flavoprotein subunit YP_411556.1 979758 R 323848 CDS YP_411557.1 82701991 3784432 complement(981523..981885) 1 NC_007614.1 succinate dehydrogenase, cytochrome b subunit 981885 3784432 Nmul_A0862 Nitrosospira multiformis ATCC 25196 succinate dehydrogenase, cytochrome b subunit YP_411557.1 981523 R 323848 CDS YP_411558.1 82701992 3784433 complement(981879..982256) 1 NC_007614.1 succinate dehydrogenase, cytochrome b subunit 982256 3784433 Nmul_A0863 Nitrosospira multiformis ATCC 25196 succinate dehydrogenase, cytochrome b subunit YP_411558.1 981879 R 323848 CDS YP_411559.1 82701993 3784434 982671..983654 1 NC_007614.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 983654 3784434 Nmul_A0864 Nitrosospira multiformis ATCC 25196 malate dehydrogenase YP_411559.1 982671 D 323848 CDS YP_411560.1 82701994 3784435 983684..984583 1 NC_007614.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 984583 prpB 3784435 prpB Nitrosospira multiformis ATCC 25196 2-methylisocitrate lyase YP_411560.1 983684 D 323848 CDS YP_411561.1 82701995 3784436 984596..985771 1 NC_007614.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 985771 3784436 Nmul_A0866 Nitrosospira multiformis ATCC 25196 methylcitrate synthase YP_411561.1 984596 D 323848 CDS YP_411562.1 82701996 3784437 986247..987602 1 NC_007614.1 hypothetical protein 987602 3784437 Nmul_A0867 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411562.1 986247 D 323848 CDS YP_411563.1 82701997 3784438 complement(987710..988240) 1 NC_007614.1 hypothetical protein 988240 3784438 Nmul_A0868 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411563.1 987710 R 323848 CDS YP_411564.1 82701998 3784439 complement(988375..988860) 1 NC_007614.1 hypothetical protein 988860 3784439 Nmul_A0869 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411564.1 988375 R 323848 CDS YP_411565.1 82701999 3784440 complement(988857..989141) 1 NC_007614.1 hypothetical protein 989141 3784440 Nmul_A0870 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411565.1 988857 R 323848 CDS YP_411566.1 82702000 3784441 989317..990768 1 NC_007614.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 990768 prpD 3784441 prpD Nitrosospira multiformis ATCC 25196 2-methylcitrate dehydratase YP_411566.1 989317 D 323848 CDS YP_411567.1 82702001 3784442 complement(990746..992275) 1 NC_007614.1 hypothetical protein 992275 3784442 Nmul_A0872 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411567.1 990746 R 323848 CDS YP_411568.1 82702002 3784443 complement(992286..993107) 1 NC_007614.1 esterase/lipase/thioesterase family protein 993107 3784443 Nmul_A0873 Nitrosospira multiformis ATCC 25196 esterase/lipase/thioesterase family protein YP_411568.1 992286 R 323848 CDS YP_411569.1 82702003 3784444 993466..994230 1 NC_007614.1 short chain dehydrogenase 994230 3784444 Nmul_A0874 Nitrosospira multiformis ATCC 25196 short chain dehydrogenase YP_411569.1 993466 D 323848 CDS YP_411570.1 82702004 3784445 994330..997170 1 NC_007614.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 997170 3784445 Nmul_A0875 Nitrosospira multiformis ATCC 25196 aconitate hydratase YP_411570.1 994330 D 323848 CDS YP_411571.1 82702005 3784446 complement(997263..998039) 1 NC_007614.1 transcriptional regulator-like protein 998039 3784446 Nmul_A0876 Nitrosospira multiformis ATCC 25196 transcriptional regulator-like protein YP_411571.1 997263 R 323848 CDS YP_411572.1 82702006 3785919 998544..999158 1 NC_007614.1 hypothetical protein 999158 3785919 Nmul_A0877 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411572.1 998544 D 323848 CDS YP_411573.1 82702007 3785920 complement(999255..1000094) 1 NC_007614.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1000094 panC 3785920 panC Nitrosospira multiformis ATCC 25196 pantoate--beta-alanine ligase YP_411573.1 999255 R 323848 CDS YP_411574.1 82702008 3785921 complement(1000108..1000899) 1 NC_007614.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1000899 panB 3785921 panB Nitrosospira multiformis ATCC 25196 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_411574.1 1000108 R 323848 CDS YP_411575.1 82702009 3785922 complement(1000971..1001612) 1 NC_007614.1 deoxynucleoside kinase 1001612 3785922 Nmul_A0880 Nitrosospira multiformis ATCC 25196 deoxynucleoside kinase YP_411575.1 1000971 R 323848 CDS YP_411576.1 82702010 3785923 complement(1001609..1002121) 1 NC_007614.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1002121 3785923 Nmul_A0881 Nitrosospira multiformis ATCC 25196 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_411576.1 1001609 R 323848 CDS YP_411577.1 82702011 3785924 complement(1002118..1003533) 1 NC_007614.1 poly(A) polymerase 1003533 3785924 Nmul_A0882 Nitrosospira multiformis ATCC 25196 poly(A) polymerase YP_411577.1 1002118 R 323848 CDS YP_411578.1 82702012 3785925 complement(1003698..1004495) 1 NC_007614.1 ABC transporter-like protein 1004495 3785925 Nmul_A0883 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_411578.1 1003698 R 323848 CDS YP_411579.1 82702013 3785926 complement(1004546..1006624) 1 NC_007614.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1006624 3785926 Nmul_A0884 Nitrosospira multiformis ATCC 25196 ATP-dependent DNA helicase RecG YP_411579.1 1004546 R 323848 CDS YP_411580.1 82702014 3785927 complement(1006684..1007073) 1 NC_007614.1 YjgF-like protein 1007073 3785927 Nmul_A0885 Nitrosospira multiformis ATCC 25196 YjgF-like protein YP_411580.1 1006684 R 323848 CDS YP_411581.1 82702015 3785928 1007178..1008428 1 NC_007614.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1008428 3785928 Nmul_A0886 Nitrosospira multiformis ATCC 25196 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_411581.1 1007178 D 323848 CDS YP_411582.1 82702016 3785929 complement(1008576..1009298) 1 NC_007614.1 hypothetical protein 1009298 3785929 Nmul_A0887 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411582.1 1008576 R 323848 CDS YP_411583.1 82702017 3785930 1009396..1009800 1 NC_007614.1 hypothetical protein 1009800 3785930 Nmul_A0888 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411583.1 1009396 D 323848 CDS YP_411584.1 82702018 3785931 complement(1009998..1011662) 1 NC_007614.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 1011662 3785931 Nmul_A0889 Nitrosospira multiformis ATCC 25196 putative ABC transporter ATP-binding protein YP_411584.1 1009998 R 323848 CDS YP_411585.1 82702019 3785932 1011933..1012262 1 NC_007614.1 hypothetical protein 1012262 3785932 Nmul_A0890 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411585.1 1011933 D 323848 CDS YP_411586.1 82702020 3785933 complement(1012367..1013092) 1 NC_007614.1 glutathione S-transferase-like protein 1013092 3785933 Nmul_A0891 Nitrosospira multiformis ATCC 25196 glutathione S-transferase-like protein YP_411586.1 1012367 R 323848 CDS YP_411587.1 82702021 3785934 1013355..1014128 1 NC_007614.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 1014128 djlA 3785934 djlA Nitrosospira multiformis ATCC 25196 Dna-J like membrane chaperone protein YP_411587.1 1013355 D 323848 CDS YP_411588.1 82702022 3785935 complement(1014174..1015334) 1 NC_007614.1 putative AttH 1015334 3785935 Nmul_A0893 Nitrosospira multiformis ATCC 25196 putative AttH YP_411588.1 1014174 R 323848 CDS YP_411589.1 82702023 3785936 complement(1015334..1017901) 1 NC_007614.1 hypothetical protein 1017901 3785936 Nmul_A0894 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411589.1 1015334 R 323848 CDS YP_411590.1 82702024 3785937 complement(1017898..1018644) 1 NC_007614.1 ABC transporter-like protein 1018644 3785937 Nmul_A0895 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_411590.1 1017898 R 323848 CDS YP_411591.1 82702025 3785938 complement(1018816..1019316) 1 NC_007614.1 hypothetical protein 1019316 3785938 Nmul_A0896 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411591.1 1018816 R 323848 CDS YP_411592.1 82702026 3784944 complement(1019692..1020690) 1 NC_007614.1 phosphate binding protein 1020690 3784944 Nmul_A0897 Nitrosospira multiformis ATCC 25196 phosphate binding protein YP_411592.1 1019692 R 323848 CDS YP_411593.1 82702027 3784945 complement(1020877..1022376) 1 NC_007614.1 phosphate-selective porin O and P 1022376 3784945 Nmul_A0898 Nitrosospira multiformis ATCC 25196 phosphate-selective porin O and P YP_411593.1 1020877 R 323848 CDS YP_411594.1 82702028 3784946 1023070..1024311 1 NC_007614.1 major facilitator transporter 1024311 3784946 Nmul_A0899 Nitrosospira multiformis ATCC 25196 major facilitator transporter YP_411594.1 1023070 D 323848 CDS YP_411595.1 82702029 3784947 complement(1024553..1025233) 1 NC_007614.1 phosphoribosyltransferase 1025233 3784947 Nmul_A0900 Nitrosospira multiformis ATCC 25196 phosphoribosyltransferase YP_411595.1 1024553 R 323848 CDS YP_411596.1 82702030 3784948 complement(1025223..1027019) 1 NC_007614.1 PHP-like protein 1027019 3784948 Nmul_A0901 Nitrosospira multiformis ATCC 25196 PHP-like protein YP_411596.1 1025223 R 323848 CDS YP_411597.1 82702031 3784949 1027272..1027763 1 NC_007614.1 hypothetical protein 1027763 3784949 Nmul_A0902 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411597.1 1027272 D 323848 CDS YP_411598.1 82702032 3784950 1027803..1029230 1 NC_007614.1 hypothetical protein 1029230 3784950 Nmul_A0903 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411598.1 1027803 D 323848 CDS YP_411599.1 82702033 3784951 1029330..1029803 1 NC_007614.1 hypothetical protein 1029803 3784951 Nmul_A0904 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411599.1 1029330 D 323848 CDS YP_411600.1 82702034 3784952 1029891..1030478 1 NC_007614.1 putative sigma 54 modulation protein/ribosomal protein S30EA 1030478 3784952 Nmul_A0905 Nitrosospira multiformis ATCC 25196 putative sigma 54 modulation protein/ribosomal protein S30EA YP_411600.1 1029891 D 323848 CDS YP_411601.1 82702035 3784953 1030552..1031133 1 NC_007614.1 isochorismatase hydrolase 1031133 3784953 Nmul_A0906 Nitrosospira multiformis ATCC 25196 isochorismatase hydrolase YP_411601.1 1030552 D 323848 CDS YP_411602.1 82702036 3784954 1031130..1032503 1 NC_007614.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1032503 3784954 Nmul_A0907 Nitrosospira multiformis ATCC 25196 nicotinate phosphoribosyltransferase YP_411602.1 1031130 D 323848 CDS YP_411603.1 82702037 3784955 complement(1032570..1033274) 1 NC_007614.1 N-formylglutamate amidohydrolase 1033274 3784955 Nmul_A0908 Nitrosospira multiformis ATCC 25196 N-formylglutamate amidohydrolase YP_411603.1 1032570 R 323848 CDS YP_411604.1 82702038 3784956 complement(1033305..1034543) 1 NC_007614.1 glutamate--cysteine ligase, GCS2 1034543 3784956 Nmul_A0909 Nitrosospira multiformis ATCC 25196 glutamate--cysteine ligase, GCS2 YP_411604.1 1033305 R 323848 CDS YP_411605.1 82702039 3784957 complement(1034540..1035280) 1 NC_007614.1 hypothetical protein 1035280 3784957 Nmul_A0910 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411605.1 1034540 R 323848 CDS YP_411606.1 82702040 3784958 complement(1035715..1038342) 1 NC_007614.1 hypothetical protein 1038342 3784958 Nmul_A0911 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411606.1 1035715 R 323848 CDS YP_411607.1 82702041 3784959 complement(1038448..1040082) 1 NC_007614.1 hypothetical protein 1040082 3784959 Nmul_A0912 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411607.1 1038448 R 323848 CDS YP_411608.1 82702042 3784960 complement(1040137..1041090) 1 NC_007614.1 hypothetical protein 1041090 3784960 Nmul_A0913 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411608.1 1040137 R 323848 CDS YP_411609.1 82702043 3784961 1041258..1042049 1 NC_007614.1 dienelactone hydrolase 1042049 3784961 Nmul_A0914 Nitrosospira multiformis ATCC 25196 dienelactone hydrolase YP_411609.1 1041258 D 323848 CDS YP_411610.1 82702044 3784962 complement(1042304..1042606) 1 NC_007614.1 hypothetical protein 1042606 3784962 Nmul_A0915 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411610.1 1042304 R 323848 CDS YP_411611.1 82702045 3786461 1042708..1043715 1 NC_007614.1 AraC family transcriptional regulator 1043715 3786461 Nmul_A0916 Nitrosospira multiformis ATCC 25196 AraC family transcriptional regulator YP_411611.1 1042708 D 323848 CDS YP_411612.1 82702046 3786462 1043912..1044370 1 NC_007614.1 hypothetical protein 1044370 3786462 Nmul_A0917 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411612.1 1043912 D 323848 CDS YP_411613.1 82702047 3786463 1044379..1044846 1 NC_007614.1 hypothetical protein 1044846 3786463 Nmul_A0918 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411613.1 1044379 D 323848 CDS YP_411614.1 82702048 3786464 1044962..1045243 1 NC_007614.1 hypothetical protein 1045243 3786464 Nmul_A0919 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411614.1 1044962 D 323848 CDS YP_411615.1 82702049 3786465 complement(1045267..1046967) 1 NC_007614.1 tyrosinase 1046967 3786465 Nmul_A0920 Nitrosospira multiformis ATCC 25196 tyrosinase YP_411615.1 1045267 R 323848 CDS YP_411616.1 82702050 3786466 1047659..1048624 1 NC_007614.1 hypothetical protein 1048624 3786466 Nmul_A0921 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411616.1 1047659 D 323848 CDS YP_411617.1 82702051 3786467 1049014..1050225 1 NC_007614.1 Phage integrase 1050225 3786467 Nmul_A0922 Nitrosospira multiformis ATCC 25196 Phage integrase YP_411617.1 1049014 D 323848 CDS YP_411618.1 82702052 3786468 complement(1050728..1051663) 1 NC_007614.1 secretion protein HlyD 1051663 3786468 Nmul_A0923 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_411618.1 1050728 R 323848 CDS YP_411619.1 82702053 3786469 complement(1051694..1053694) 1 NC_007614.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 1053694 secA 3786469 secA Nitrosospira multiformis ATCC 25196 preprotein translocase subunit SecA YP_411619.1 1051694 R 323848 CDS YP_411620.1 82702054 3786470 complement(1053687..1055834) 1 NC_007614.1 M50 family peptidase 1055834 3786470 Nmul_A0925 Nitrosospira multiformis ATCC 25196 M50 family peptidase YP_411620.1 1053687 R 323848 CDS YP_411621.1 82702055 3786471 complement(1055859..1057703) 1 NC_007614.1 GAF domain-containing protein 1057703 3786471 Nmul_A0926 Nitrosospira multiformis ATCC 25196 GAF domain-containing protein YP_411621.1 1055859 R 323848 CDS YP_411622.1 82702056 3786472 complement(1057739..1073389) 1 NC_007614.1 PA-phosphatase-like phosphoesterase 1073389 3786472 Nmul_A0927 Nitrosospira multiformis ATCC 25196 PA-phosphatase-like phosphoesterase YP_411622.1 1057739 R 323848 CDS YP_411623.1 82702057 3786473 complement(1073450..1074004) 1 NC_007614.1 hypothetical protein 1074004 3786473 Nmul_A0928 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411623.1 1073450 R 323848 CDS YP_411624.1 82702058 3786474 complement(1074077..1074316) 1 NC_007614.1 hypothetical protein 1074316 3786474 Nmul_A0929 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411624.1 1074077 R 323848 CDS YP_411625.1 82702059 3786475 1074392..1074760 1 NC_007614.1 SAP DNA-binding domain-containing protein 1074760 3786475 Nmul_A0930 Nitrosospira multiformis ATCC 25196 SAP DNA-binding domain-containing protein YP_411625.1 1074392 D 323848 CDS YP_411626.1 82702060 3786476 complement(1075595..1078051) 1 NC_007614.1 hypothetical protein 1078051 3786476 Nmul_A0931 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411626.1 1075595 R 323848 CDS YP_411627.1 82702061 3786477 complement(1078481..1078711) 1 NC_007614.1 phage transcriptional regulator AlpA 1078711 3786477 Nmul_A0932 Nitrosospira multiformis ATCC 25196 phage transcriptional regulator AlpA YP_411627.1 1078481 R 323848 CDS YP_411628.1 82702062 3786478 complement(1078953..1079849) 1 NC_007614.1 hypothetical protein 1079849 3786478 Nmul_A0933 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411628.1 1078953 R 323848 CDS YP_411629.1 82702063 3786479 complement(1080363..1081619) 1 NC_007614.1 RNA-directed DNA polymerase 1081619 3786479 Nmul_A0934 Nitrosospira multiformis ATCC 25196 RNA-directed DNA polymerase YP_411629.1 1080363 R 323848 CDS YP_411630.1 82702064 3785195 1082641..1083168 1 NC_007614.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1083168 3785195 Nmul_A0935 Nitrosospira multiformis ATCC 25196 adenine phosphoribosyltransferase YP_411630.1 1082641 D 323848 CDS YP_411631.1 82702065 3785196 1083238..1083846 1 NC_007614.1 hypothetical protein 1083846 3785196 Nmul_A0936 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411631.1 1083238 D 323848 CDS YP_411632.1 82702066 3785197 complement(1083927..1085621) 1 NC_007614.1 hypothetical protein 1085621 3785197 Nmul_A0937 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411632.1 1083927 R 323848 CDS YP_411633.1 82702067 3785198 complement(1085843..1086256) 1 NC_007614.1 GreA/GreB family elongation factor 1086256 3785198 Nmul_A0938 Nitrosospira multiformis ATCC 25196 GreA/GreB family elongation factor YP_411633.1 1085843 R 323848 CDS YP_411634.1 82702068 3785199 1086595..1087275 1 NC_007614.1 O-methyltransferase family protein 1087275 3785199 Nmul_A0939 Nitrosospira multiformis ATCC 25196 O-methyltransferase family protein YP_411634.1 1086595 D 323848 CDS YP_411635.1 82702069 3785200 1087828..1089342 1 NC_007614.1 amino acid permease-associated protein 1089342 3785200 Nmul_A0940 Nitrosospira multiformis ATCC 25196 amino acid permease-associated protein YP_411635.1 1087828 D 323848 CDS YP_411636.1 82702070 3785201 1089385..1090116 1 NC_007614.1 hypothetical protein 1090116 3785201 Nmul_A0941 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411636.1 1089385 D 323848 CDS YP_411637.1 82702071 3785202 1090113..1090811 1 NC_007614.1 hypothetical protein 1090811 3785202 Nmul_A0942 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411637.1 1090113 D 323848 CDS YP_411638.1 82702072 3785203 1090857..1094495 1 NC_007614.1 allophanate hydrolase subunit 2 1094495 3785203 Nmul_A0943 Nitrosospira multiformis ATCC 25196 allophanate hydrolase subunit 2 YP_411638.1 1090857 D 323848 CDS YP_411639.1 82702073 3785204 1094498..1096384 1 NC_007614.1 catalyzes the hydrolysis of allophanate; allophanate hydrolase 1096384 3785204 Nmul_A0944 Nitrosospira multiformis ATCC 25196 allophanate hydrolase YP_411639.1 1094498 D 323848 CDS YP_411640.1 82702074 3785205 complement(1096535..1097164) 1 NC_007614.1 hypothetical protein 1097164 3785205 Nmul_A0945 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411640.1 1096535 R 323848 CDS YP_411641.1 82702075 3785206 complement(1097315..1098019) 1 NC_007614.1 putative glutathione S-transferase 1098019 3785206 Nmul_A0946 Nitrosospira multiformis ATCC 25196 putative glutathione S-transferase YP_411641.1 1097315 R 323848 CDS YP_411642.1 82702076 3785207 1098149..1098571 1 NC_007614.1 putative transcriptional regulator 1098571 3785207 Nmul_A0947 Nitrosospira multiformis ATCC 25196 putative transcriptional regulator YP_411642.1 1098149 D 323848 CDS YP_411643.1 82702077 3785208 1098572..1101079 1 NC_007614.1 hypothetical protein 1101079 3785208 Nmul_A0948 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411643.1 1098572 D 323848 CDS YP_411644.1 82702078 3785209 1101121..1102278 1 NC_007614.1 DNA-directed DNA polymerase 1102278 3785209 Nmul_A0949 Nitrosospira multiformis ATCC 25196 DNA-directed DNA polymerase YP_411644.1 1101121 D 323848 CDS YP_411645.1 82702079 3785210 1102426..1103580 1 NC_007614.1 secretion protein HlyD 1103580 3785210 Nmul_A0950 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_411645.1 1102426 D 323848 CDS YP_411646.1 82702080 3785211 1103621..1104325 1 NC_007614.1 ABC transporter-like protein 1104325 3785211 Nmul_A0951 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_411646.1 1103621 D 323848 CDS YP_411647.1 82702081 3785212 1104510..1104983 1 NC_007614.1 nuclease 1104983 3785212 Nmul_A0952 Nitrosospira multiformis ATCC 25196 nuclease YP_411647.1 1104510 D 323848 CDS YP_411648.1 82702082 3785744 1104993..1106201 1 NC_007614.1 hypothetical protein 1106201 3785744 Nmul_A0953 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411648.1 1104993 D 323848 CDS YP_411649.1 82702083 3785745 1106247..1107446 1 NC_007614.1 hypothetical protein 1107446 3785745 Nmul_A0954 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411649.1 1106247 D 323848 CDS YP_411650.1 82702084 3785746 complement(1107652..1107951) 1 NC_007614.1 hypothetical protein 1107951 3785746 Nmul_A0955 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411650.1 1107652 R 323848 CDS YP_411651.1 82702085 3785747 complement(1108095..1109777) 1 NC_007614.1 hypothetical protein 1109777 3785747 Nmul_A0956 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411651.1 1108095 R 323848 CDS YP_411652.1 82702086 3785748 complement(1109884..1111026) 1 NC_007614.1 squalene/phytoene synthase 1111026 3785748 Nmul_A0957 Nitrosospira multiformis ATCC 25196 squalene/phytoene synthase YP_411652.1 1109884 R 323848 CDS YP_411653.1 82702087 3785749 1111398..1112717 1 NC_007614.1 hypothetical protein 1112717 3785749 Nmul_A0958 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411653.1 1111398 D 323848 CDS YP_411654.1 82702088 3785750 complement(1112791..1114050) 1 NC_007614.1 hypothetical protein 1114050 3785750 Nmul_A0959 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411654.1 1112791 R 323848 CDS YP_411655.1 82702089 3785751 1114358..1114897 1 NC_007614.1 Appr-1-p processing 1114897 3785751 Nmul_A0960 Nitrosospira multiformis ATCC 25196 Appr-1-p processing YP_411655.1 1114358 D 323848 CDS YP_411656.1 82702090 3785752 complement(1114944..1117358) 1 NC_007614.1 penicillin amidase 1117358 3785752 Nmul_A0961 Nitrosospira multiformis ATCC 25196 penicillin amidase YP_411656.1 1114944 R 323848 CDS YP_411657.1 82702091 3785753 complement(1117593..1117898) 1 NC_007614.1 cytochrome c, class I 1117898 3785753 Nmul_A0962 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_411657.1 1117593 R 323848 CDS YP_411658.1 82702092 3785754 complement(1118067..1119407) 1 NC_007614.1 amidohydrolase 1119407 3785754 Nmul_A0963 Nitrosospira multiformis ATCC 25196 amidohydrolase YP_411658.1 1118067 R 323848 CDS YP_411659.1 82702093 3785755 complement(1119472..1120620) 1 NC_007614.1 unsaturated glucuronyl hydrolase 1120620 3785755 Nmul_A0964 Nitrosospira multiformis ATCC 25196 unsaturated glucuronyl hydrolase YP_411659.1 1119472 R 323848 CDS YP_411660.1 82702094 3785756 complement(1120650..1122317) 1 NC_007614.1 hypothetical protein 1122317 3785756 Nmul_A0965 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411660.1 1120650 R 323848 CDS YP_411661.1 82702095 3785757 complement(1122503..1123741) 1 NC_007614.1 major facilitator transporter 1123741 3785757 Nmul_A0966 Nitrosospira multiformis ATCC 25196 major facilitator transporter YP_411661.1 1122503 R 323848 CDS YP_411662.1 82702096 3785758 complement(1123734..1124942) 1 NC_007614.1 acyl-CoA dehydrogenase-like protein 1124942 3785758 Nmul_A0967 Nitrosospira multiformis ATCC 25196 acyl-CoA dehydrogenase-like protein YP_411662.1 1123734 R 323848 CDS YP_411663.1 82702097 3785759 complement(1124942..1126603) 1 NC_007614.1 AMP-dependent synthetase and ligase 1126603 3785759 Nmul_A0968 Nitrosospira multiformis ATCC 25196 AMP-dependent synthetase and ligase YP_411663.1 1124942 R 323848 CDS YP_411664.1 82702098 3785760 complement(1126600..1128501) 1 NC_007614.1 L-carnitine dehydratase/bile acid-inducible protein F 1128501 3785760 Nmul_A0969 Nitrosospira multiformis ATCC 25196 L-carnitine dehydratase/bile acid-inducible protein F YP_411664.1 1126600 R 323848 CDS YP_411665.1 82702099 3785761 complement(1128565..1128837) 1 NC_007614.1 sulfur transfer protein ThiS 1128837 3785761 Nmul_A0970 Nitrosospira multiformis ATCC 25196 sulfur transfer protein ThiS YP_411665.1 1128565 R 323848 CDS YP_411666.1 82702100 3785762 complement(1129043..1129522) 1 NC_007614.1 Mov34/MPN/PAD-1 1129522 3785762 Nmul_A0971 Nitrosospira multiformis ATCC 25196 Mov34/MPN/PAD-1 YP_411666.1 1129043 R 323848 CDS YP_411667.1 82702101 3785763 complement(1129676..1130848) 1 NC_007614.1 UBA/THIF-type NAD/FAD binding domain-containing protein 1130848 3785763 Nmul_A0972 Nitrosospira multiformis ATCC 25196 UBA/THIF-type NAD/FAD binding domain-containing protein YP_411667.1 1129676 R 323848 CDS YP_411668.1 82702102 3786573 complement(1130887..1132827) 1 NC_007614.1 TonB-dependent receptor 1132827 3786573 Nmul_A0973 Nitrosospira multiformis ATCC 25196 TonB-dependent receptor YP_411668.1 1130887 R 323848 CDS YP_411669.1 82702103 3786574 1133408..1136512 1 NC_007614.1 glycosyl transferase family protein 1136512 3786574 Nmul_A0974 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_411669.1 1133408 D 323848 CDS YP_411670.1 82702104 3786575 complement(1136680..1136985) 1 NC_007614.1 hypothetical protein 1136985 3786575 Nmul_A0975 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411670.1 1136680 R 323848 CDS YP_411671.1 82702105 3786576 1137470..1137988 1 NC_007614.1 hypothetical protein 1137988 3786576 Nmul_A0976 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411671.1 1137470 D 323848 CDS YP_411672.1 82702106 3786577 complement(1138087..1138770) 1 NC_007614.1 esterase/lipase/thioesterase family protein 1138770 3786577 Nmul_A0977 Nitrosospira multiformis ATCC 25196 esterase/lipase/thioesterase family protein YP_411672.1 1138087 R 323848 CDS YP_411673.1 82702107 3786578 complement(1138820..1139131) 1 NC_007614.1 putative ferredoxin 2fe-2s protein 1139131 3786578 Nmul_A0978 Nitrosospira multiformis ATCC 25196 putative ferredoxin 2fe-2s protein YP_411673.1 1138820 R 323848 CDS YP_411674.1 82702108 3786579 complement(1139170..1140270) 1 NC_007614.1 extracellular solute-binding protein 1140270 3786579 Nmul_A0979 Nitrosospira multiformis ATCC 25196 extracellular solute-binding protein YP_411674.1 1139170 R 323848 CDS YP_411675.1 82702109 3786580 complement(1140294..1141097) 1 NC_007614.1 binding-protein dependent transport system inner membrane protein 1141097 3786580 Nmul_A0980 Nitrosospira multiformis ATCC 25196 binding-protein dependent transport system inner membrane protein YP_411675.1 1140294 R 323848 CDS YP_411676.1 82702110 3786581 complement(1141099..1141998) 1 NC_007614.1 binding-protein dependent transport system inner membrane protein 1141998 3786581 Nmul_A0981 Nitrosospira multiformis ATCC 25196 binding-protein dependent transport system inner membrane protein YP_411676.1 1141099 R 323848 CDS YP_411677.1 82702111 3786582 complement(1142010..1143101) 1 NC_007614.1 spermidine/putrescine ABC transporter ATP-binding subunit 1143101 3786582 Nmul_A0982 Nitrosospira multiformis ATCC 25196 spermidine/putrescine ABC transporter ATP-binding subunit YP_411677.1 1142010 R 323848 CDS YP_411678.1 82702112 3786583 complement(1143144..1143416) 1 NC_007614.1 RelB antitoxin 1143416 3786583 Nmul_A0983 Nitrosospira multiformis ATCC 25196 RelB antitoxin YP_411678.1 1143144 R 323848 CDS YP_411679.1 82702113 3786584 complement(1143423..1143845) 1 NC_007614.1 PilT protein-like 1143845 3786584 Nmul_A0984 Nitrosospira multiformis ATCC 25196 PilT protein-like YP_411679.1 1143423 R 323848 CDS YP_411680.1 82702114 3786585 complement(1143832..1144065) 1 NC_007614.1 transcriptional regulator/antitoxin, MazE 1144065 3786585 Nmul_A0985 Nitrosospira multiformis ATCC 25196 transcriptional regulator/antitoxin, MazE YP_411680.1 1143832 R 323848 CDS YP_411681.1 82702115 3786586 1144213..1144485 1 NC_007614.1 resolvase-like protein 1144485 3786586 Nmul_A0986 Nitrosospira multiformis ATCC 25196 resolvase-like protein YP_411681.1 1144213 D 323848 CDS YP_411682.1 82702116 3786587 1144740..1145816 1 NC_007614.1 hypothetical protein 1145816 3786587 Nmul_A0987 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411682.1 1144740 D 323848 CDS YP_411683.1 82702117 3786588 complement(1146418..1147932) 1 NC_007614.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 1147932 ubiB 3786588 ubiB Nitrosospira multiformis ATCC 25196 putative ubiquinone biosynthesis protein UbiB YP_411683.1 1146418 R 323848 CDS YP_411684.1 82702118 3786589 complement(1147998..1148579) 1 NC_007614.1 hypothetical protein 1148579 3786589 Nmul_A0989 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411684.1 1147998 R 323848 CDS YP_411685.1 82702119 3786590 complement(1148592..1149479) 1 NC_007614.1 import inner membrane translocase subunit Tim44 1149479 3786590 Nmul_A0990 Nitrosospira multiformis ATCC 25196 import inner membrane translocase subunit Tim44 YP_411685.1 1148592 R 323848 CDS YP_411686.1 82702120 3786591 1149977..1150861 1 NC_007614.1 hypothetical protein 1150861 3786591 Nmul_A0991 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411686.1 1149977 D 323848 CDS YP_411687.1 82702121 3785822 1150919..1152049 1 NC_007614.1 acetate kinase 1152049 3785822 Nmul_A0992 Nitrosospira multiformis ATCC 25196 acetate kinase YP_411687.1 1150919 D 323848 CDS YP_411688.1 82702122 3785823 1152112..1154535 1 NC_007614.1 putative phosphoketolase 1154535 3785823 Nmul_A0993 Nitrosospira multiformis ATCC 25196 putative phosphoketolase YP_411688.1 1152112 D 323848 CDS YP_411689.1 82702123 3785824 1154663..1155433 1 NC_007614.1 hypothetical protein 1155433 3785824 Nmul_A0994 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411689.1 1154663 D 323848 CDS YP_411690.1 82702124 3785825 complement(1155480..1155896) 1 NC_007614.1 hypothetical protein 1155896 3785825 Nmul_A0995 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411690.1 1155480 R 323848 CDS YP_411691.1 82702125 3785826 complement(1155945..1156397) 1 NC_007614.1 alkylhydroperoxidase AhpD core 1156397 3785826 Nmul_A0996 Nitrosospira multiformis ATCC 25196 alkylhydroperoxidase AhpD core YP_411691.1 1155945 R 323848 CDS YP_411692.1 82702126 3785827 complement(1156868..1157716) 1 NC_007614.1 hypothetical protein 1157716 3785827 Nmul_A0997 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411692.1 1156868 R 323848 CDS YP_411693.1 82702127 3785828 1157814..1160201 1 NC_007614.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1160201 3785828 Nmul_A0998 Nitrosospira multiformis ATCC 25196 phosphoenolpyruvate synthase YP_411693.1 1157814 D 323848 CDS YP_411694.1 82702128 3785829 1160611..1160790 1 NC_007614.1 hypothetical protein 1160790 3785829 Nmul_A0999 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411694.1 1160611 D 323848 CDS YP_411695.1 82702129 3785830 complement(1160959..1162116) 1 NC_007614.1 histidine kinase 1162116 3785830 Nmul_A1000 Nitrosospira multiformis ATCC 25196 histidine kinase YP_411695.1 1160959 R 323848 CDS YP_411696.1 82702130 3785832 complement(1162827..1163255) 1 NC_007614.1 ClpXP protease specificity-enhancing factor 1163255 3785832 Nmul_A1001 Nitrosospira multiformis ATCC 25196 ClpXP protease specificity-enhancing factor YP_411696.1 1162827 R 323848 CDS YP_411697.1 82702131 3785833 complement(1163252..1163851) 1 NC_007614.1 glutathione S-transferase-like protein 1163851 3785833 Nmul_A1002 Nitrosospira multiformis ATCC 25196 glutathione S-transferase-like protein YP_411697.1 1163252 R 323848 CDS YP_411698.1 82702132 3785834 complement(1163907..1164644) 1 NC_007614.1 cytochrome c1 1164644 3785834 Nmul_A1003 Nitrosospira multiformis ATCC 25196 cytochrome c1 YP_411698.1 1163907 R 323848 CDS YP_411699.1 82702133 3785835 complement(1164644..1165888) 1 NC_007614.1 cytochrome b/b6-like 1165888 3785835 Nmul_A1004 Nitrosospira multiformis ATCC 25196 cytochrome b/b6-like YP_411699.1 1164644 R 323848 CDS YP_411700.1 82702134 3785836 complement(1165890..1166492) 1 NC_007614.1 ubiquinol-cytochrome c reductase, iron-sulfur subunit 1166492 3785836 Nmul_A1005 Nitrosospira multiformis ATCC 25196 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_411700.1 1165890 R 323848 CDS YP_411701.1 82702135 3785837 1166933..1167130 1 NC_007614.1 hypothetical protein 1167130 3785837 Nmul_A1006 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411701.1 1166933 D 323848 CDS YP_411702.1 82702136 3785838 complement(1167307..1168284) 1 NC_007614.1 hypothetical protein 1168284 3785838 Nmul_A1007 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411702.1 1167307 R 323848 CDS YP_411703.1 82702137 3785839 complement(1168293..1169192) 1 NC_007614.1 hypothetical protein 1169192 3785839 Nmul_A1008 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411703.1 1168293 R 323848 CDS YP_411704.1 82702138 3785840 1169570..1170175 1 NC_007614.1 calcium-binding EF-hand 1170175 3785840 Nmul_A1009 Nitrosospira multiformis ATCC 25196 calcium-binding EF-hand YP_411704.1 1169570 D 323848 CDS YP_411705.1 82702139 3786535 complement(1170324..1171562) 1 NC_007614.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1171562 argJ 3786535 argJ Nitrosospira multiformis ATCC 25196 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein YP_411705.1 1170324 R 323848 CDS YP_411706.1 82702140 3786536 1171894..1172121 1 NC_007614.1 hypothetical protein 1172121 3786536 Nmul_A1011 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411706.1 1171894 D 323848 CDS YP_411707.1 82702141 3786537 complement(1172185..1172967) 1 NC_007614.1 hypothetical protein 1172967 3786537 Nmul_A1012 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411707.1 1172185 R 323848 CDS YP_411708.1 82702142 3786538 1173215..1173658 1 NC_007614.1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 1173658 3786538 Nmul_A1013 Nitrosospira multiformis ATCC 25196 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_411708.1 1173215 D 323848 CDS YP_411709.1 82702143 3786539 1173639..1174304 1 NC_007614.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1174304 3786539 Nmul_A1014 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit B YP_411709.1 1173639 D 323848 CDS YP_411710.1 82702144 3786540 1174301..1176127 1 NC_007614.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1176127 3786540 Nmul_A1015 Nitrosospira multiformis ATCC 25196 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_411710.1 1174301 D 323848 CDS YP_411711.1 82702145 3786541 1176160..1176666 1 NC_007614.1 NADH-quinone oxidoreductase subunit E 1176666 3786541 Nmul_A1016 Nitrosospira multiformis ATCC 25196 NADH-quinone oxidoreductase subunit E YP_411711.1 1176160 D 323848 CDS YP_411712.1 82702146 3786542 1176644..1177921 1 NC_007614.1 NADH-quinone oxidoreductase subunit F 1177921 3786542 Nmul_A1017 Nitrosospira multiformis ATCC 25196 NADH-quinone oxidoreductase subunit F YP_411712.1 1176644 D 323848 CDS YP_411713.1 82702147 3786543 1177965..1180793 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1180793 3786543 Nmul_A1018 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit G YP_411713.1 1177965 D 323848 CDS YP_411714.1 82702148 3786544 1180884..1181837 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1181837 3786544 Nmul_A1019 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit H YP_411714.1 1180884 D 323848 CDS YP_411715.1 82702149 3786545 1181865..1182380 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1182380 3786545 Nmul_A1020 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit I YP_411715.1 1181865 D 323848 CDS YP_411716.1 82702150 3786546 1182415..1182981 1 NC_007614.1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 1182981 3786546 Nmul_A1021 Nitrosospira multiformis ATCC 25196 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_411716.1 1182415 D 323848 CDS YP_411717.1 82702151 3786547 1182978..1183325 1 NC_007614.1 NADH-ubiquinone oxidoreductase, chain 4L 1183325 3786547 Nmul_A1022 Nitrosospira multiformis ATCC 25196 NADH-ubiquinone oxidoreductase, chain 4L YP_411717.1 1182978 D 323848 CDS YP_411718.1 82702152 3786548 1183566..1185554 1 NC_007614.1 proton-translocating NADH-quinone oxidoreductase, chain L 1185554 3786548 Nmul_A1023 Nitrosospira multiformis ATCC 25196 proton-translocating NADH-quinone oxidoreductase, chain L YP_411718.1 1183566 D 323848 CDS YP_411719.1 82702153 3786549 1185536..1187038 1 NC_007614.1 proton-translocating NADH-quinone oxidoreductase, chain M 1187038 3786549 Nmul_A1024 Nitrosospira multiformis ATCC 25196 proton-translocating NADH-quinone oxidoreductase, chain M YP_411719.1 1185536 D 323848 CDS YP_411720.1 82702154 3786550 1187035..1188558 1 NC_007614.1 proton-translocating NADH-quinone oxidoreductase, chain N 1188558 3786550 Nmul_A1025 Nitrosospira multiformis ATCC 25196 proton-translocating NADH-quinone oxidoreductase, chain N YP_411720.1 1187035 D 323848 CDS YP_411721.1 82702155 3786551 complement(1188635..1189600) 1 NC_007614.1 hypothetical protein 1189600 3786551 Nmul_A1026 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411721.1 1188635 R 323848 CDS YP_411722.1 82702156 3786552 complement(1189655..1189840) 1 NC_007614.1 hypothetical protein 1189840 3786552 Nmul_A1027 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411722.1 1189655 R 323848 CDS YP_411723.1 82702157 3786553 complement(1189924..1190340) 1 NC_007614.1 biopolymer transport protein ExbD/TolR 1190340 3786553 Nmul_A1028 Nitrosospira multiformis ATCC 25196 biopolymer transport protein ExbD/TolR YP_411723.1 1189924 R 323848 CDS YP_411724.1 82702158 3785156 complement(1190431..1191042) 1 NC_007614.1 MotA/TolQ/ExbB proton channel 1191042 3785156 Nmul_A1029 Nitrosospira multiformis ATCC 25196 MotA/TolQ/ExbB proton channel YP_411724.1 1190431 R 323848 CDS YP_411725.1 82702159 3785157 1191375..1192718 1 NC_007614.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1192718 xseA 3785157 xseA Nitrosospira multiformis ATCC 25196 exodeoxyribonuclease VII large subunit YP_411725.1 1191375 D 323848 CDS YP_411726.1 82702160 3785158 1192972..1193349 1 NC_007614.1 hypothetical protein 1193349 3785158 Nmul_A1031 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411726.1 1192972 D 323848 CDS YP_411727.1 82702161 3785159 1193419..1194618 1 NC_007614.1 putative RNA methylase 1194618 3785159 Nmul_A1032 Nitrosospira multiformis ATCC 25196 putative RNA methylase YP_411727.1 1193419 D 323848 CDS YP_411728.1 82702162 3785160 1194611..1195117 1 NC_007614.1 disulfide bond formation protein DsbB 1195117 3785160 Nmul_A1033 Nitrosospira multiformis ATCC 25196 disulfide bond formation protein DsbB YP_411728.1 1194611 D 323848 CDS YP_411729.1 82702163 3785161 1195316..1196197 1 NC_007614.1 putative metalloprotease; heat shock protein HtpX 1196197 3785161 Nmul_A1034 Nitrosospira multiformis ATCC 25196 heat shock protein HtpX YP_411729.1 1195316 D 323848 CDS YP_411730.1 82702164 3785162 complement(1196312..1197184) 1 NC_007614.1 VacJ-like lipoprotein 1197184 3785162 Nmul_A1035 Nitrosospira multiformis ATCC 25196 VacJ-like lipoprotein YP_411730.1 1196312 R 323848 CDS YP_411731.1 82702165 3785163 complement(1197645..1199180) 1 NC_007614.1 integral membrane protein MviN 1199180 3785163 Nmul_A1036 Nitrosospira multiformis ATCC 25196 integral membrane protein MviN YP_411731.1 1197645 R 323848 CDS YP_411732.1 82702166 3785164 1199385..1199648 1 NC_007614.1 30S ribosomal protein S20 1199648 3785164 Nmul_A1037 Nitrosospira multiformis ATCC 25196 30S ribosomal protein S20 YP_411732.1 1199385 D 323848 CDS YP_411733.1 82702167 3785165 complement(1199826..1200659) 1 NC_007614.1 hypothetical protein 1200659 3785165 Nmul_A1038 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411733.1 1199826 R 323848 CDS YP_411734.1 82702168 3785166 complement(1200673..1202043) 1 NC_007614.1 hypothetical protein 1202043 3785166 Nmul_A1039 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411734.1 1200673 R 323848 CDS YP_411735.1 82702169 3785167 1202564..1204138 1 NC_007614.1 arginine decarboxylase 1204138 3785167 Nmul_A1040 Nitrosospira multiformis ATCC 25196 arginine decarboxylase YP_411735.1 1202564 D 323848 CDS YP_411736.1 82702170 3785168 1204239..1205411 1 NC_007614.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 1205411 3785168 Nmul_A1041 Nitrosospira multiformis ATCC 25196 acetylornithine aminotransferase YP_411736.1 1204239 D 323848 CDS YP_411737.1 82702171 3785169 1205440..1206429 1 NC_007614.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1206429 3785169 Nmul_A1042 Nitrosospira multiformis ATCC 25196 ornithine carbamoyltransferase YP_411737.1 1205440 D 323848 CDS YP_411738.1 82702172 3785170 1206513..1207736 1 NC_007614.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1207736 3785170 Nmul_A1043 Nitrosospira multiformis ATCC 25196 argininosuccinate synthase YP_411738.1 1206513 D 323848 CDS YP_411739.1 82702173 3785171 1207777..1208262 1 NC_007614.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 1208262 3785171 Nmul_A1044 Nitrosospira multiformis ATCC 25196 putative nucleotide-binding protein YP_411739.1 1207777 D 323848 CDS YP_411740.1 82702174 3785172 complement(1208359..1209069) 1 NC_007614.1 glutamine amidotransferase class-I 1209069 3785172 Nmul_A1045 Nitrosospira multiformis ATCC 25196 glutamine amidotransferase class-I YP_411740.1 1208359 R 323848 CDS YP_411741.1 82702175 3785173 complement(1209130..1209657) 1 NC_007614.1 Fe2+-dicitrate sensor membrane component-like protein 1209657 3785173 Nmul_A1046 Nitrosospira multiformis ATCC 25196 Fe2+-dicitrate sensor membrane component-like protein YP_411741.1 1209130 R 323848 CDS YP_411742.1 82702176 3785174 complement(1209759..1210178) 1 NC_007614.1 biopolymer transport protein ExbD/TolR 1210178 3785174 Nmul_A1047 Nitrosospira multiformis ATCC 25196 biopolymer transport protein ExbD/TolR YP_411742.1 1209759 R 323848 CDS YP_411743.1 82702177 3785175 complement(1210178..1210942) 1 NC_007614.1 MotA/TolQ/ExbB proton channel 1210942 3785175 Nmul_A1048 Nitrosospira multiformis ATCC 25196 MotA/TolQ/ExbB proton channel YP_411743.1 1210178 R 323848 CDS YP_411744.1 82702178 3784869 complement(1210947..1211618) 1 NC_007614.1 TonB-like protein 1211618 3784869 Nmul_A1049 Nitrosospira multiformis ATCC 25196 TonB-like protein YP_411744.1 1210947 R 323848 CDS YP_411745.1 82702179 3784870 complement(1211635..1212216) 1 NC_007614.1 signal peptide protein 1212216 3784870 Nmul_A1050 Nitrosospira multiformis ATCC 25196 signal peptide protein YP_411745.1 1211635 R 323848 CDS YP_411746.1 82702180 3784871 1212770..1213279 1 NC_007614.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 1213279 3784871 Nmul_A1051 Nitrosospira multiformis ATCC 25196 RNA polymerase factor sigma-70 YP_411746.1 1212770 D 323848 CDS YP_411747.1 82702181 3784872 1213276..1213653 1 NC_007614.1 hypothetical protein 1213653 3784872 Nmul_A1052 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411747.1 1213276 D 323848 CDS YP_411748.1 82702182 3784873 1213635..1214000 1 NC_007614.1 hypothetical protein 1214000 3784873 Nmul_A1053 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411748.1 1213635 D 323848 CDS YP_411749.1 82702183 3784874 1214138..1214554 1 NC_007614.1 RDD 1214554 3784874 Nmul_A1054 Nitrosospira multiformis ATCC 25196 RDD YP_411749.1 1214138 D 323848 CDS YP_411750.1 82702184 3784875 complement(1214655..1216115) 1 NC_007614.1 peptidase U62, modulator of DNA gyrase 1216115 3784875 Nmul_A1055 Nitrosospira multiformis ATCC 25196 peptidase U62, modulator of DNA gyrase YP_411750.1 1214655 R 323848 CDS YP_411751.1 82702185 3784876 complement(1216157..1217017) 1 NC_007614.1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1217017 3784876 Nmul_A1056 Nitrosospira multiformis ATCC 25196 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_411751.1 1216157 R 323848 CDS YP_411752.1 82702186 3784877 complement(1217239..1221033) 1 NC_007614.1 hypothetical protein 1221033 3784877 Nmul_A1057 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411752.1 1217239 R 323848 CDS YP_411753.1 82702187 3784878 1221341..1224121 1 NC_007614.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1224121 3784878 Nmul_A1058 Nitrosospira multiformis ATCC 25196 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_411753.1 1221341 D 323848 CDS YP_411754.1 82702188 3784879 1224350..1225261 1 NC_007614.1 hypothetical protein 1225261 3784879 Nmul_A1059 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411754.1 1224350 D 323848 CDS YP_411755.1 82702189 3784880 1225735..1226652 1 NC_007614.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1226652 3784880 Nmul_A1060 Nitrosospira multiformis ATCC 25196 branched-chain amino acid aminotransferase YP_411755.1 1225735 D 323848 CDS YP_411756.1 82702190 3784881 1226706..1226909 1 NC_007614.1 hypothetical protein 1226909 3784881 Nmul_A1061 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411756.1 1226706 D 323848 CDS YP_411757.1 82702191 3784882 1227030..1228439 1 NC_007614.1 phosphomannomutase 1228439 3784882 Nmul_A1062 Nitrosospira multiformis ATCC 25196 phosphomannomutase YP_411757.1 1227030 D 323848 CDS YP_411758.1 82702192 3784883 1228528..1229028 1 NC_007614.1 protein tyrosine phosphatase 1229028 3784883 Nmul_A1063 Nitrosospira multiformis ATCC 25196 protein tyrosine phosphatase YP_411758.1 1228528 D 323848 CDS YP_411759.1 82702193 3784884 complement(1229215..1232148) 1 NC_007614.1 ribonuclease 1232148 3784884 Nmul_A1064 Nitrosospira multiformis ATCC 25196 ribonuclease YP_411759.1 1229215 R 323848 CDS YP_411760.1 82702194 3784885 1232624..1233610 1 NC_007614.1 pseudouridine synthase RluD 1233610 3784885 Nmul_A1065 Nitrosospira multiformis ATCC 25196 pseudouridine synthase RluD YP_411760.1 1232624 D 323848 CDS YP_411761.1 82702195 3784886 1233764..1234714 1 NC_007614.1 peptidase S49 1234714 3784886 Nmul_A1066 Nitrosospira multiformis ATCC 25196 peptidase S49 YP_411761.1 1233764 D 323848 CDS YP_411762.1 82702196 3784887 complement(1234920..1235642) 1 NC_007614.1 uroporphyrin-III C/tetrapyrrole methyltransferase 1235642 3784887 Nmul_A1067 Nitrosospira multiformis ATCC 25196 uroporphyrin-III C/tetrapyrrole methyltransferase YP_411762.1 1234920 R 323848 CDS YP_411763.1 82702197 3784682 complement(1235639..1236235) 1 NC_007614.1 maf protein 1236235 3784682 Nmul_A1068 Nitrosospira multiformis ATCC 25196 maf protein YP_411763.1 1235639 R 323848 CDS YP_411764.1 82702198 3784683 1236489..1236989 1 NC_007614.1 hypothetical protein 1236989 3784683 Nmul_A1069 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411764.1 1236489 D 323848 CDS YP_411765.1 82702199 3784684 1237011..1237190 1 NC_007614.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1237190 rpmF 3784684 rpmF Nitrosospira multiformis ATCC 25196 50S ribosomal protein L32 YP_411765.1 1237011 D 323848 CDS YP_411766.1 82702200 3784685 1237245..1238306 1 NC_007614.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1238306 3784685 Nmul_A1071 Nitrosospira multiformis ATCC 25196 putative glycerol-3-phosphate acyltransferase PlsX YP_411766.1 1237245 D 323848 CDS YP_411767.1 82702201 3784686 1238303..1239262 1 NC_007614.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 1239262 3784686 Nmul_A1072 Nitrosospira multiformis ATCC 25196 3-oxoacyl-(acyl carrier protein) synthase III YP_411767.1 1238303 D 323848 CDS YP_411768.1 82702202 3784687 1239411..1240361 1 NC_007614.1 malonyl CoA-acyl carrier protein transacylase 1240361 3784687 Nmul_A1073 Nitrosospira multiformis ATCC 25196 malonyl CoA-acyl carrier protein transacylase YP_411768.1 1239411 D 323848 CDS YP_411769.1 82702203 3784688 1240425..1241165 1 NC_007614.1 3-oxoacyl-(acyl-carrier-protein) reductase 1241165 3784688 Nmul_A1074 Nitrosospira multiformis ATCC 25196 3-oxoacyl-(acyl-carrier-protein) reductase YP_411769.1 1240425 D 323848 CDS YP_411770.1 82702204 3784689 1241343..1241579 1 NC_007614.1 acyl carrier protein 1241579 3784689 Nmul_A1075 Nitrosospira multiformis ATCC 25196 acyl carrier protein YP_411770.1 1241343 D 323848 CDS YP_411771.1 82702205 3784690 1241613..1242860 1 NC_007614.1 beta-ketoacyl synthase 1242860 3784690 Nmul_A1076 Nitrosospira multiformis ATCC 25196 beta-ketoacyl synthase YP_411771.1 1241613 D 323848 CDS YP_411772.1 82702206 3784691 1242916..1243863 1 NC_007614.1 aminodeoxychorismate lyase 1243863 3784691 Nmul_A1077 Nitrosospira multiformis ATCC 25196 aminodeoxychorismate lyase YP_411772.1 1242916 D 323848 CDS YP_411773.1 82702207 3784692 1244109..1245059 1 NC_007614.1 citrate lyase 1245059 3784692 Nmul_A1078 Nitrosospira multiformis ATCC 25196 citrate lyase YP_411773.1 1244109 D 323848 CDS YP_411774.1 82702208 3784693 1245277..1246467 1 NC_007614.1 catalyzes the formation of malyl-CoA from malate and CoA; malate--CoA ligase subunit beta 1246467 sucC 3784693 sucC Nitrosospira multiformis ATCC 25196 malate--CoA ligase subunit beta YP_411774.1 1245277 D 323848 CDS YP_411775.1 82702209 3784694 1246468..1247355 1 NC_007614.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1247355 3784694 Nmul_A1080 Nitrosospira multiformis ATCC 25196 succinyl-CoA synthetase subunit alpha YP_411775.1 1246468 D 323848 CDS YP_411776.1 82702210 3784695 1247408..1247779 1 NC_007614.1 hypothetical protein 1247779 3784695 Nmul_A1081 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411776.1 1247408 D 323848 CDS YP_411777.1 82702211 3784696 1248068..1249780 1 NC_007614.1 hydroxylamine oxidase 1249780 3784696 Nmul_A1082 Nitrosospira multiformis ATCC 25196 hydroxylamine oxidase YP_411777.1 1248068 D 323848 CDS YP_411778.1 82702212 3784697 1249813..1250928 1 NC_007614.1 hypothetical protein 1250928 3784697 Nmul_A1083 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411778.1 1249813 D 323848 CDS YP_411779.1 82702213 3784698 1251805..1252512 1 NC_007614.1 cytochrome c-554 1252512 3784698 Nmul_A1084 Nitrosospira multiformis ATCC 25196 cytochrome c-554 YP_411779.1 1251805 D 323848 CDS YP_411780.1 82702214 3784699 1252514..1253116 1 NC_007614.1 NapC/NirT cytochrome c-like protein 1253116 3784699 Nmul_A1085 Nitrosospira multiformis ATCC 25196 NapC/NirT cytochrome c-like protein YP_411780.1 1252514 D 323848 CDS YP_411781.1 82702215 3784700 1253509..1254441 1 NC_007614.1 phosphate ABC transporter permease 1254441 3784700 Nmul_A1086 Nitrosospira multiformis ATCC 25196 phosphate ABC transporter permease YP_411781.1 1253509 D 323848 CDS YP_411782.1 82702216 3784701 1254556..1255488 1 NC_007614.1 phosphate ABC transporter permease 1255488 3784701 Nmul_A1087 Nitrosospira multiformis ATCC 25196 phosphate ABC transporter permease YP_411782.1 1254556 D 323848 CDS YP_411783.1 82702217 3784702 1255482..1256291 1 NC_007614.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 1256291 3784702 Nmul_A1088 Nitrosospira multiformis ATCC 25196 phosphate ABC transporter ATP-binding protein YP_411783.1 1255482 D 323848 CDS YP_411784.1 82702218 3784703 1256501..1257262 1 NC_007614.1 triosephosphate isomerase 1257262 3784703 Nmul_A1089 Nitrosospira multiformis ATCC 25196 triosephosphate isomerase YP_411784.1 1256501 D 323848 CDS YP_411785.1 82702219 3784704 1257280..1257633 1 NC_007614.1 preprotein translocase subunit SecG 1257633 secG 3784704 secG Nitrosospira multiformis ATCC 25196 preprotein translocase subunit SecG YP_411785.1 1257280 D 323848 CDS YP_411786.1 82702220 3784706 1257922..1258278 1 NC_007614.1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 1258278 3784706 Nmul_A1091 Nitrosospira multiformis ATCC 25196 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_411786.1 1257922 D 323848 CDS YP_411787.1 82702221 3784707 1258283..1258759 1 NC_007614.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1258759 3784707 Nmul_A1092 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit B YP_411787.1 1258283 D 323848 CDS YP_411788.1 82702222 3784708 1258768..1259385 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1259385 3784708 Nmul_A1093 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit C YP_411788.1 1258768 D 323848 CDS YP_411789.1 82702223 3784709 1259407..1260660 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1260660 3784709 Nmul_A1094 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit D YP_411789.1 1259407 D 323848 CDS YP_411790.1 82702224 3784710 1260688..1261164 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1261164 3784710 Nmul_A1095 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit E YP_411790.1 1260688 D 323848 CDS YP_411791.1 82702225 3784711 1261161..1262438 1 NC_007614.1 NADH-quinone oxidoreductase subunit F 1262438 3784711 Nmul_A1096 Nitrosospira multiformis ATCC 25196 NADH-quinone oxidoreductase subunit F YP_411791.1 1261161 D 323848 CDS YP_411792.1 82702226 3784712 1262502..1264931 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1264931 3784712 Nmul_A1097 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit G YP_411792.1 1262502 D 323848 CDS YP_411793.1 82702227 3784713 1264954..1266054 1 NC_007614.1 respiratory-chain NADH dehydrogenase subunit 1 1266054 3784713 Nmul_A1098 Nitrosospira multiformis ATCC 25196 respiratory-chain NADH dehydrogenase subunit 1 YP_411793.1 1264954 D 323848 CDS YP_411794.1 82702228 3784714 1266069..1266557 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1266557 3784714 Nmul_A1099 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit I YP_411794.1 1266069 D 323848 CDS YP_411795.1 82702229 3784715 1266752..1267357 1 NC_007614.1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 1267357 3784715 Nmul_A1100 Nitrosospira multiformis ATCC 25196 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_411795.1 1266752 D 323848 CDS YP_411796.1 82702230 3784716 1267389..1267709 1 NC_007614.1 NADH-ubiquinone oxidoreductase, chain 4L 1267709 3784716 Nmul_A1101 Nitrosospira multiformis ATCC 25196 NADH-ubiquinone oxidoreductase, chain 4L YP_411796.1 1267389 D 323848 CDS YP_411797.1 82702231 3784717 1267776..1269728 1 NC_007614.1 proton-translocating NADH-quinone oxidoreductase, chain L 1269728 3784717 Nmul_A1102 Nitrosospira multiformis ATCC 25196 proton-translocating NADH-quinone oxidoreductase, chain L YP_411797.1 1267776 D 323848 CDS YP_411798.1 82702232 3784718 1269813..1271300 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1271300 3784718 Nmul_A1103 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit M YP_411798.1 1269813 D 323848 CDS YP_411799.1 82702233 3784719 1271333..1272778 1 NC_007614.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1272778 3784719 Nmul_A1104 Nitrosospira multiformis ATCC 25196 NADH dehydrogenase subunit N YP_411799.1 1271333 D 323848 CDS YP_411800.1 82702234 3785685 complement(1272948..1274057) 1 NC_007614.1 transmembrane protein 1274057 3785685 Nmul_A1105 Nitrosospira multiformis ATCC 25196 transmembrane protein YP_411800.1 1272948 R 323848 CDS YP_411801.1 82702235 3785686 complement(1274663..1275115) 1 NC_007614.1 hypothetical protein 1275115 3785686 Nmul_A1106 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411801.1 1274663 R 323848 CDS YP_411802.1 82702236 3785687 complement(1275224..1276213) 1 NC_007614.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 1276213 3785687 Nmul_A1107 Nitrosospira multiformis ATCC 25196 serine/threonine protein kinase YP_411802.1 1275224 R 323848 CDS YP_411803.1 82702237 3785688 complement(1276275..1277390) 1 NC_007614.1 putative membrane-bound dehydrogenase oxidoreductase protein 1277390 3785688 Nmul_A1108 Nitrosospira multiformis ATCC 25196 putative membrane-bound dehydrogenase oxidoreductase protein YP_411803.1 1276275 R 323848 CDS YP_411804.1 82702238 3785689 1277558..1279477 1 NC_007614.1 molecular chaperone; heat shock protein 90 1279477 3785689 Nmul_A1109 Nitrosospira multiformis ATCC 25196 heat shock protein 90 YP_411804.1 1277558 D 323848 CDS YP_411805.1 82702239 3785690 complement(1279720..1280628) 1 NC_007614.1 LysR family transcriptional regulator 1280628 3785690 Nmul_A1110 Nitrosospira multiformis ATCC 25196 LysR family transcriptional regulator YP_411805.1 1279720 R 323848 CDS YP_411806.1 82702240 3785691 1280908..1282386 1 NC_007614.1 Outer membrane efflux protein 1282386 3785691 Nmul_A1111 Nitrosospira multiformis ATCC 25196 Outer membrane efflux protein YP_411806.1 1280908 D 323848 CDS YP_411807.1 82702241 3785692 1282383..1283534 1 NC_007614.1 secretion protein HlyD 1283534 3785692 Nmul_A1112 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_411807.1 1282383 D 323848 CDS YP_411808.1 82702242 3785693 1283538..1286660 1 NC_007614.1 heavy metal efflux pump CzcA 1286660 3785693 Nmul_A1113 Nitrosospira multiformis ATCC 25196 heavy metal efflux pump CzcA YP_411808.1 1283538 D 323848 CDS YP_411809.1 82702243 3785694 1286673..1286837 1 NC_007614.1 nitrogen regulatory protein P-II (GlnB, GlnK) 1286837 3785694 Nmul_A1114 Nitrosospira multiformis ATCC 25196 nitrogen regulatory protein P-II (GlnB, GlnK) YP_411809.1 1286673 D 323848 CDS YP_411810.1 82702244 3785695 1286867..1287052 1 NC_007614.1 nitrogen regulatory protein P-II (GlnB, GlnK) 1287052 3785695 Nmul_A1115 Nitrosospira multiformis ATCC 25196 nitrogen regulatory protein P-II (GlnB, GlnK) YP_411810.1 1286867 D 323848 CDS YP_411811.1 82702245 3785696 1287109..1287990 1 NC_007614.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 1287990 3785696 Nmul_A1116 Nitrosospira multiformis ATCC 25196 acetylglutamate kinase YP_411811.1 1287109 D 323848 CDS YP_411812.1 82702246 3785697 1288232..1288834 1 NC_007614.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 1288834 slmA 3785697 slmA Nitrosospira multiformis ATCC 25196 nucleoid occlusion protein YP_411812.1 1288232 D 323848 CDS YP_411813.1 82702247 3785698 complement(1289103..1289855) 1 NC_007614.1 UBA/THIF-type NAD/FAD binding domain-containing protein 1289855 3785698 Nmul_A1118 Nitrosospira multiformis ATCC 25196 UBA/THIF-type NAD/FAD binding domain-containing protein YP_411813.1 1289103 R 323848 CDS YP_411814.1 82702248 3785699 complement(1290142..1291587) 1 NC_007614.1 carboxyl-terminal protease 1291587 3785699 Nmul_A1119 Nitrosospira multiformis ATCC 25196 carboxyl-terminal protease YP_411814.1 1290142 R 323848 CDS YP_411815.1 82702249 3785700 complement(1291624..1292820) 1 NC_007614.1 peptidase M23B 1292820 3785700 Nmul_A1120 Nitrosospira multiformis ATCC 25196 peptidase M23B YP_411815.1 1291624 R 323848 CDS YP_411816.1 82702250 3785701 complement(1293048..1293803) 1 NC_007614.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 1293803 gpmA 3785701 gpmA Nitrosospira multiformis ATCC 25196 phosphoglyceromutase YP_411816.1 1293048 R 323848 CDS YP_411817.1 82702251 3785702 1294094..1294519 1 NC_007614.1 rhodanese-like protein 1294519 3785702 Nmul_A1122 Nitrosospira multiformis ATCC 25196 rhodanese-like protein YP_411817.1 1294094 D 323848 CDS YP_411818.1 82702252 3785703 1294516..1294785 1 NC_007614.1 glutaredoxin GrxC 1294785 3785703 Nmul_A1123 Nitrosospira multiformis ATCC 25196 glutaredoxin GrxC YP_411818.1 1294516 D 323848 CDS YP_411819.1 82702253 3785704 1294937..1295416 1 NC_007614.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 1295416 3785704 Nmul_A1124 Nitrosospira multiformis ATCC 25196 preprotein translocase subunit SecB YP_411819.1 1294937 D 323848 CDS YP_411820.1 82702254 3784238 1295424..1295912 1 NC_007614.1 hypothetical protein 1295912 3784238 Nmul_A1125 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411820.1 1295424 D 323848 CDS YP_411821.1 82702255 3784239 1295909..1296910 1 NC_007614.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1296910 gpsA 3784239 gpsA Nitrosospira multiformis ATCC 25196 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_411821.1 1295909 D 323848 CDS YP_411822.1 82702256 3784240 complement(1296966..1297427) 1 NC_007614.1 tRNA/rRNA methyltransferase SpoU 1297427 3784240 Nmul_A1127 Nitrosospira multiformis ATCC 25196 tRNA/rRNA methyltransferase SpoU YP_411822.1 1296966 R 323848 CDS YP_411823.1 82702257 3784241 complement(1297466..1298185) 1 NC_007614.1 phosphoribosyltransferase 1298185 3784241 Nmul_A1128 Nitrosospira multiformis ATCC 25196 phosphoribosyltransferase YP_411823.1 1297466 R 323848 CDS YP_411824.1 82702258 3784242 1298315..1299343 1 NC_007614.1 biotin synthase 1299343 3784242 Nmul_A1129 Nitrosospira multiformis ATCC 25196 biotin synthase YP_411824.1 1298315 D 323848 CDS YP_411825.1 82702259 3784243 1299418..1300608 1 NC_007614.1 8-amino-7-oxononanoate synthase 1300608 3784243 Nmul_A1130 Nitrosospira multiformis ATCC 25196 8-amino-7-oxononanoate synthase YP_411825.1 1299418 D 323848 CDS YP_411826.1 82702260 3784244 1300692..1301483 1 NC_007614.1 bioH protein 1301483 3784244 Nmul_A1131 Nitrosospira multiformis ATCC 25196 bioH protein YP_411826.1 1300692 D 323848 CDS YP_411827.1 82702261 3784245 1301490..1302413 1 NC_007614.1 biotin biosynthesis protein BioC 1302413 3784245 Nmul_A1132 Nitrosospira multiformis ATCC 25196 biotin biosynthesis protein BioC YP_411827.1 1301490 D 323848 CDS YP_411828.1 82702262 3784246 1302418..1303098 1 NC_007614.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1303098 bioD 3784246 bioD Nitrosospira multiformis ATCC 25196 dithiobiotin synthetase YP_411828.1 1302418 D 323848 CDS YP_411829.1 82702263 3784247 complement(1303809..1304561) 1 NC_007614.1 ThiJ/PfpI 1304561 3784247 Nmul_A1134 Nitrosospira multiformis ATCC 25196 ThiJ/PfpI YP_411829.1 1303809 R 323848 CDS YP_411830.1 82702264 3784248 complement(1305080..1305295) 1 NC_007614.1 cold-shock DNA-binding domain-containing protein 1305295 3784248 Nmul_A1135 Nitrosospira multiformis ATCC 25196 cold-shock DNA-binding domain-containing protein YP_411830.1 1305080 R 323848 CDS YP_411831.1 82702265 3784249 1307050..1307679 1 NC_007614.1 hypothetical protein 1307679 3784249 Nmul_A1136 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411831.1 1307050 D 323848 CDS YP_411832.1 82702266 3784250 complement(1307832..1308236) 1 NC_007614.1 membrane protein 1308236 3784250 Nmul_A1137 Nitrosospira multiformis ATCC 25196 membrane protein YP_411832.1 1307832 R 323848 CDS YP_411833.1 82702267 3784251 1308742..1311012 1 NC_007614.1 response regulator receiver /GGDEF/PAS/PAC domain-containing protein 1311012 3784251 Nmul_A1138 Nitrosospira multiformis ATCC 25196 response regulator receiver /GGDEF/PAS/PAC domain-containing protein YP_411833.1 1308742 D 323848 CDS YP_411834.1 82702268 3784252 1311257..1312030 1 NC_007614.1 beta-lactamase-like protein 1312030 3784252 Nmul_A1139 Nitrosospira multiformis ATCC 25196 beta-lactamase-like protein YP_411834.1 1311257 D 323848 CDS YP_411835.1 82702269 3784253 complement(1312500..1312817) 1 NC_007614.1 hypothetical protein 1312817 3784253 Nmul_A1140 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411835.1 1312500 R 323848 CDS YP_411836.1 82702270 3784254 1312849..1313169 1 NC_007614.1 hypothetical protein 1313169 3784254 Nmul_A1141 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411836.1 1312849 D 323848 CDS YP_411837.1 82702271 3784255 complement(1313347..1313667) 1 NC_007614.1 hypothetical protein 1313667 3784255 Nmul_A1142 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411837.1 1313347 R 323848 CDS YP_411838.1 82702272 3784256 complement(1313896..1315143) 1 NC_007614.1 hypothetical protein 1315143 3784256 Nmul_A1143 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411838.1 1313896 R 323848 CDS YP_411839.1 82702273 3784200 complement(1315184..1317034) 1 NC_007614.1 DNA mismatch repair protein MutL 1317034 3784200 Nmul_A1144 Nitrosospira multiformis ATCC 25196 DNA mismatch repair protein MutL YP_411839.1 1315184 R 323848 CDS YP_411840.1 82702274 3784201 complement(1317373..1318299) 1 NC_007614.1 transcriptional regulator CysB-like protein 1318299 3784201 Nmul_A1145 Nitrosospira multiformis ATCC 25196 transcriptional regulator CysB-like protein YP_411840.1 1317373 R 323848 CDS YP_411841.1 82702275 3784202 1318485..1320578 1 NC_007614.1 nitrite and sulfite reductase 4Fe-4S region 1320578 3784202 Nmul_A1146 Nitrosospira multiformis ATCC 25196 nitrite and sulfite reductase 4Fe-4S region YP_411841.1 1318485 D 323848 CDS YP_411842.1 82702276 3784203 1320609..1321379 1 NC_007614.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 1321379 3784203 Nmul_A1147 Nitrosospira multiformis ATCC 25196 phosphoadenosine phosphosulfate reductase YP_411842.1 1320609 D 323848 CDS YP_411843.1 82702277 3784204 1321501..1322502 1 NC_007614.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1322502 3784204 Nmul_A1148 Nitrosospira multiformis ATCC 25196 sulfate adenylyltransferase subunit 2 YP_411843.1 1321501 D 323848 CDS YP_411844.1 82702278 3784205 1322644..1323927 1 NC_007614.1 Sulfate adenylyltransferase, large subunit 1323927 3784205 Nmul_A1149 Nitrosospira multiformis ATCC 25196 Sulfate adenylyltransferase, large subunit YP_411844.1 1322644 D 323848 CDS YP_411845.1 82702279 3784206 1324193..1327771 1 NC_007614.1 hypothetical protein 1327771 3784206 Nmul_A1150 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411845.1 1324193 D 323848 CDS YP_411846.1 82702280 3784207 1328140..1329267 1 NC_007614.1 NAD(P)(+) transhydrogenase 1329267 3784207 Nmul_A1151 Nitrosospira multiformis ATCC 25196 NAD(P)(+) transhydrogenase YP_411846.1 1328140 D 323848 CDS YP_411847.1 82702281 3784208 1329374..1329679 1 NC_007614.1 transmembrane NAD(P) transhydrogenase (subunit alpha part 2) 1329679 3784208 Nmul_A1152 Nitrosospira multiformis ATCC 25196 transmembrane NAD(P) transhydrogenase (subunit alpha part 2) YP_411847.1 1329374 D 323848 CDS YP_411848.1 82702282 3784209 1329683..1331062 1 NC_007614.1 NAD(P) transhydrogenase subunit beta 1331062 3784209 Nmul_A1153 Nitrosospira multiformis ATCC 25196 NAD(P) transhydrogenase subunit beta YP_411848.1 1329683 D 323848 CDS YP_411849.1 82702283 3784210 1331111..1331896 1 NC_007614.1 dienelactone hydrolase family protein 1331896 3784210 Nmul_A1154 Nitrosospira multiformis ATCC 25196 dienelactone hydrolase family protein YP_411849.1 1331111 D 323848 CDS YP_411850.1 82702284 3784211 1332292..1333413 1 NC_007614.1 alanine dehydrogenase 1333413 3784211 Nmul_A1155 Nitrosospira multiformis ATCC 25196 alanine dehydrogenase YP_411850.1 1332292 D 323848 CDS YP_411851.1 82702285 3784212 1333870..1335657 1 NC_007614.1 TrkA-N:Sodium/hydrogen exchanger 1335657 3784212 Nmul_A1156 Nitrosospira multiformis ATCC 25196 TrkA-N:Sodium/hydrogen exchanger YP_411851.1 1333870 D 323848 CDS YP_411852.1 82702286 3784213 1335742..1336107 1 NC_007614.1 arsenate reductase-like protein 1336107 3784213 Nmul_A1157 Nitrosospira multiformis ATCC 25196 arsenate reductase-like protein YP_411852.1 1335742 D 323848 CDS YP_411853.1 82702287 3784214 1336227..1336643 1 NC_007614.1 hypothetical protein 1336643 3784214 Nmul_A1158 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411853.1 1336227 D 323848 CDS YP_411854.1 82702288 3784215 1336779..1338335 1 NC_007614.1 periplasmic sensor signal transduction histidine kinase 1338335 3784215 Nmul_A1159 Nitrosospira multiformis ATCC 25196 periplasmic sensor signal transduction histidine kinase YP_411854.1 1336779 D 323848 CDS YP_411855.1 82702289 3784216 1338332..1338883 1 NC_007614.1 hypothetical protein 1338883 3784216 Nmul_A1160 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411855.1 1338332 D 323848 CDS YP_411856.1 82702290 3784217 1338898..1340259 1 NC_007614.1 two component sigma-54 specific Fis family transcriptional regulator 1340259 3784217 Nmul_A1161 Nitrosospira multiformis ATCC 25196 two component sigma-54 specific Fis family transcriptional regulator YP_411856.1 1338898 D 323848 CDS YP_411857.1 82702291 3784218 1340439..1340729 1 NC_007614.1 hypothetical protein 1340729 3784218 Nmul_A1162 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411857.1 1340439 D 323848 CDS YP_411858.1 82702292 3784219 1341024..1341689 1 NC_007614.1 hypothetical protein 1341689 3784219 Nmul_A1163 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411858.1 1341024 D 323848 CDS YP_411859.1 82702293 3784333 1341928..1343301 1 NC_007614.1 erythromycin esterase 1343301 3784333 Nmul_A1164 Nitrosospira multiformis ATCC 25196 erythromycin esterase YP_411859.1 1341928 D 323848 CDS YP_411860.1 82702294 3784334 1343398..1344465 1 NC_007614.1 hypothetical protein 1344465 3784334 Nmul_A1165 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411860.1 1343398 D 323848 CDS YP_411861.1 82702295 3784335 1345027..1345818 1 NC_007614.1 proteinase inhibitor I1, Kazal 1345818 3784335 Nmul_A1166 Nitrosospira multiformis ATCC 25196 proteinase inhibitor I1, Kazal YP_411861.1 1345027 D 323848 CDS YP_411862.1 82702296 3784336 1346502..1346951 1 NC_007614.1 heat shock protein Hsp20 1346951 3784336 Nmul_A1167 Nitrosospira multiformis ATCC 25196 heat shock protein Hsp20 YP_411862.1 1346502 D 323848 CDS YP_411863.1 82702297 3784337 1347015..1347515 1 NC_007614.1 hypothetical protein 1347515 3784337 Nmul_A1168 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411863.1 1347015 D 323848 CDS YP_411864.1 82702298 3784338 1347625..1348074 1 NC_007614.1 signal-transduction protein 1348074 3784338 Nmul_A1169 Nitrosospira multiformis ATCC 25196 signal-transduction protein YP_411864.1 1347625 D 323848 CDS YP_411865.1 82702299 3784339 1348173..1348685 1 NC_007614.1 heat shock protein Hsp20 1348685 3784339 Nmul_A1170 Nitrosospira multiformis ATCC 25196 heat shock protein Hsp20 YP_411865.1 1348173 D 323848 CDS YP_411866.1 82702300 3784340 1348856..1349329 1 NC_007614.1 YbhB and YbcL 1349329 3784340 Nmul_A1171 Nitrosospira multiformis ATCC 25196 YbhB and YbcL YP_411866.1 1348856 D 323848 CDS YP_411867.1 82702301 3784341 1349594..1350571 1 NC_007614.1 lipopolysaccharide biosynthesis protein 1350571 3784341 Nmul_A1172 Nitrosospira multiformis ATCC 25196 lipopolysaccharide biosynthesis protein YP_411867.1 1349594 D 323848 CDS YP_411868.1 82702302 3784342 1350827..1351594 1 NC_007614.1 methyltransferase FkbM 1351594 3784342 Nmul_A1173 Nitrosospira multiformis ATCC 25196 methyltransferase FkbM YP_411868.1 1350827 D 323848 CDS YP_411869.1 82702303 3784343 complement(1351748..1353511) 1 NC_007614.1 ABC transporter-like protein 1353511 3784343 Nmul_A1174 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_411869.1 1351748 R 323848 CDS YP_411870.1 82702304 3784344 complement(1353740..1353991) 1 NC_007614.1 hypothetical protein 1353991 3784344 Nmul_A1175 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411870.1 1353740 R 323848 CDS YP_411871.1 82702305 3784345 1354265..1355227 1 NC_007614.1 hypothetical protein 1355227 3784345 Nmul_A1176 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411871.1 1354265 D 323848 CDS YP_411872.1 82702306 3784346 1355243..1357804 1 NC_007614.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 1357804 ligD 3784346 ligD Nitrosospira multiformis ATCC 25196 ATP-dependent DNA ligase YP_411872.1 1355243 D 323848 CDS YP_411873.1 82702307 3784347 complement(1357825..1358859) 1 NC_007614.1 O-methyltransferase family protein 1358859 3784347 Nmul_A1178 Nitrosospira multiformis ATCC 25196 O-methyltransferase family protein YP_411873.1 1357825 R 323848 CDS YP_411874.1 82702308 3784348 complement(1358927..1359421) 1 NC_007614.1 hypothetical protein 1359421 3784348 Nmul_A1179 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411874.1 1358927 R 323848 CDS YP_411875.1 82702309 3784349 complement(1359530..1360411) 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 1360411 3784349 Nmul_A1180 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_411875.1 1359530 R 323848 CDS YP_411876.1 82702310 3784350 complement(1360702..1362705) 1 NC_007614.1 AsmA 1362705 3784350 Nmul_A1181 Nitrosospira multiformis ATCC 25196 AsmA YP_411876.1 1360702 R 323848 CDS YP_411877.1 82702311 3784351 complement(1362911..1363633) 1 NC_007614.1 Crp/FNR family transcriptional regulator 1363633 3784351 Nmul_A1182 Nitrosospira multiformis ATCC 25196 Crp/FNR family transcriptional regulator YP_411877.1 1362911 R 323848 CDS YP_411878.1 82702312 3784294 1364325..1373042 1 NC_007614.1 glycosyltransferase 36 1373042 3784294 Nmul_A1183 Nitrosospira multiformis ATCC 25196 glycosyltransferase 36 YP_411878.1 1364325 D 323848 CDS YP_411879.1 82702313 3784295 complement(1373185..1373784) 1 NC_007614.1 CRP/FNR family transcriptional regulator 1373784 3784295 Nmul_A1184 Nitrosospira multiformis ATCC 25196 CRP/FNR family transcriptional regulator YP_411879.1 1373185 R 323848 CDS YP_411880.1 82702314 3784296 1373982..1374296 1 NC_007614.1 hypothetical protein 1374296 3784296 Nmul_A1185 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411880.1 1373982 D 323848 CDS YP_411881.1 82702315 3784297 1374441..1375454 1 NC_007614.1 lipolytic protein 1375454 3784297 Nmul_A1186 Nitrosospira multiformis ATCC 25196 lipolytic protein YP_411881.1 1374441 D 323848 CDS YP_411882.1 82702316 3784298 1375522..1375827 1 NC_007614.1 hypothetical protein 1375827 3784298 Nmul_A1187 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411882.1 1375522 D 323848 CDS YP_411883.1 82702317 3784299 1375885..1376307 1 NC_007614.1 transcriptional regulator 1376307 3784299 Nmul_A1188 Nitrosospira multiformis ATCC 25196 transcriptional regulator YP_411883.1 1375885 D 323848 CDS YP_411884.1 82702318 3784300 1376562..1376768 1 NC_007614.1 hypothetical protein 1376768 3784300 Nmul_A1189 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411884.1 1376562 D 323848 CDS YP_411885.1 82702319 3784301 complement(1377020..1377826) 1 NC_007614.1 hypothetical protein 1377826 3784301 Nmul_A1190 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411885.1 1377020 R 323848 CDS YP_411886.1 82702320 3784302 complement(1378191..1380284) 1 NC_007614.1 periplasmic sensor hybrid histidine kinase 1380284 3784302 Nmul_A1191 Nitrosospira multiformis ATCC 25196 periplasmic sensor hybrid histidine kinase YP_411886.1 1378191 R 323848 CDS YP_411887.1 82702321 3784303 1380540..1381556 1 NC_007614.1 thiosulfate-binding protein 1381556 3784303 Nmul_A1192 Nitrosospira multiformis ATCC 25196 thiosulfate-binding protein YP_411887.1 1380540 D 323848 CDS YP_411888.1 82702322 3784304 1382026..1382625 1 NC_007614.1 transport-associated protein 1382625 3784304 Nmul_A1193 Nitrosospira multiformis ATCC 25196 transport-associated protein YP_411888.1 1382026 D 323848 CDS YP_411889.1 82702323 3784305 1382700..1382918 1 NC_007614.1 CsbD-like protein 1382918 3784305 Nmul_A1194 Nitrosospira multiformis ATCC 25196 CsbD-like protein YP_411889.1 1382700 D 323848 CDS YP_411890.1 82702324 3784306 1382993..1383571 1 NC_007614.1 transport-associated protein 1383571 3784306 Nmul_A1195 Nitrosospira multiformis ATCC 25196 transport-associated protein YP_411890.1 1382993 D 323848 CDS YP_411891.1 82702325 3784307 1383663..1383881 1 NC_007614.1 CsbD-like protein 1383881 3784307 Nmul_A1196 Nitrosospira multiformis ATCC 25196 CsbD-like protein YP_411891.1 1383663 D 323848 CDS YP_411892.1 82702326 3784308 1383907..1384386 1 NC_007614.1 hypothetical protein 1384386 3784308 Nmul_A1197 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411892.1 1383907 D 323848 CDS YP_411893.1 82702327 3784309 1384751..1385170 1 NC_007614.1 hypothetical protein 1385170 3784309 Nmul_A1198 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411893.1 1384751 D 323848 CDS YP_411894.1 82702328 3784310 complement(1385210..1386778) 1 NC_007614.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1386778 guaA 3784310 guaA Nitrosospira multiformis ATCC 25196 GMP synthase YP_411894.1 1385210 R 323848 CDS YP_411895.1 82702329 3784311 complement(1386932..1388392) 1 NC_007614.1 inosine-5'-monophosphate dehydrogenase 1388392 3784311 Nmul_A1200 Nitrosospira multiformis ATCC 25196 inosine-5'-monophosphate dehydrogenase YP_411895.1 1386932 R 323848 CDS YP_411896.1 82702330 3784312 complement(1388585..1388875) 1 NC_007614.1 hypothetical protein 1388875 3784312 Nmul_A1201 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411896.1 1388585 R 323848 CDS YP_411897.1 82702331 3784313 complement(1388900..1389337) 1 NC_007614.1 cyclase/dehydrase 1389337 3784313 Nmul_A1202 Nitrosospira multiformis ATCC 25196 cyclase/dehydrase YP_411897.1 1388900 R 323848 CDS YP_411898.1 82702332 3786134 1389705..1390148 1 NC_007614.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1390148 smpB 3786134 smpB Nitrosospira multiformis ATCC 25196 SsrA-binding protein YP_411898.1 1389705 D 323848 CDS YP_411899.1 82702333 3786135 1390187..1391257 1 NC_007614.1 cytochrome oxidase assembly 1391257 3786135 Nmul_A1204 Nitrosospira multiformis ATCC 25196 cytochrome oxidase assembly YP_411899.1 1390187 D 323848 CDS YP_411900.1 82702334 3786136 complement(1391214..1391549) 1 NC_007614.1 hypothetical protein 1391549 3786136 Nmul_A1205 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411900.1 1391214 R 323848 CDS YP_411901.1 82702335 3786137 complement(1391884..1393194) 1 NC_007614.1 hypothetical protein 1393194 3786137 Nmul_A1206 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411901.1 1391884 R 323848 CDS YP_411902.1 82702336 3786138 complement(1393202..1393750) 1 NC_007614.1 cytochrome C biogenesis protein 1393750 3786138 Nmul_A1207 Nitrosospira multiformis ATCC 25196 cytochrome C biogenesis protein YP_411902.1 1393202 R 323848 CDS YP_411903.1 82702337 3786139 complement(1393747..1394271) 1 NC_007614.1 periplasmic protein thiol 1394271 3786139 Nmul_A1208 Nitrosospira multiformis ATCC 25196 periplasmic protein thiol YP_411903.1 1393747 R 323848 CDS YP_411904.1 82702338 3786140 complement(1394268..1396307) 1 NC_007614.1 cytochrome c-type biogenesis protein CcmF 1396307 3786140 Nmul_A1209 Nitrosospira multiformis ATCC 25196 cytochrome c-type biogenesis protein CcmF YP_411904.1 1394268 R 323848 CDS YP_411905.1 82702339 3786141 complement(1396402..1396848) 1 NC_007614.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 1396848 3786141 Nmul_A1210 Nitrosospira multiformis ATCC 25196 cytochrome c-type biogenesis protein CcmE YP_411905.1 1396402 R 323848 CDS YP_411906.1 82702340 3786142 complement(1396832..1397029) 1 NC_007614.1 hypothetical protein 1397029 3786142 Nmul_A1211 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411906.1 1396832 R 323848 CDS YP_411907.1 82702341 3786143 complement(1397026..1397766) 1 NC_007614.1 heme exporter protein CcmC 1397766 3786143 Nmul_A1212 Nitrosospira multiformis ATCC 25196 heme exporter protein CcmC YP_411907.1 1397026 R 323848 CDS YP_411908.1 82702342 3786144 1398192..1399085 1 NC_007614.1 HhH-GPD 1399085 3786144 Nmul_A1213 Nitrosospira multiformis ATCC 25196 HhH-GPD YP_411908.1 1398192 D 323848 CDS YP_411909.1 82702343 3786145 complement(1399202..1400008) 1 NC_007614.1 glutamate racemase 1400008 3786145 Nmul_A1214 Nitrosospira multiformis ATCC 25196 glutamate racemase YP_411909.1 1399202 R 323848 CDS YP_411910.1 82702344 3786146 complement(1400115..1400612) 1 NC_007614.1 GCN5-like N-acetyltransferase 1400612 3786146 Nmul_A1215 Nitrosospira multiformis ATCC 25196 GCN5-like N-acetyltransferase YP_411910.1 1400115 R 323848 CDS YP_411911.1 82702345 3786147 complement(1400698..1401357) 1 NC_007614.1 heme exporter protein CcmB 1401357 3786147 Nmul_A1216 Nitrosospira multiformis ATCC 25196 heme exporter protein CcmB YP_411911.1 1400698 R 323848 CDS YP_411912.1 82702346 3786148 complement(1401359..1401979) 1 NC_007614.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 1401979 3786148 Nmul_A1217 Nitrosospira multiformis ATCC 25196 cytochrome c biogenesis protein CcmA YP_411912.1 1401359 R 323848 CDS YP_411913.1 82702347 3786149 complement(1402327..1402647) 1 NC_007614.1 hypothetical protein 1402647 3786149 Nmul_A1218 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411913.1 1402327 R 323848 CDS YP_411914.1 82702348 3786150 complement(1402676..1403518) 1 NC_007614.1 hypothetical protein 1403518 3786150 Nmul_A1219 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411914.1 1402676 R 323848 CDS YP_411915.1 82702349 3786151 complement(1403528..1403812) 1 NC_007614.1 glyoxalase family protein 1403812 3786151 Nmul_A1220 Nitrosospira multiformis ATCC 25196 glyoxalase family protein YP_411915.1 1403528 R 323848 CDS YP_411916.1 82702350 3786152 complement(1403809..1403991) 1 NC_007614.1 glyoxalase family protein 1403991 3786152 Nmul_A1221 Nitrosospira multiformis ATCC 25196 glyoxalase family protein YP_411916.1 1403809 R 323848 CDS YP_411917.1 82702351 3785561 complement(1404161..1406827) 1 NC_007614.1 von Willebrand factor, type A 1406827 3785561 Nmul_A1222 Nitrosospira multiformis ATCC 25196 von Willebrand factor, type A YP_411917.1 1404161 R 323848 CDS YP_411918.1 82702352 3785562 complement(1406824..1407294) 1 NC_007614.1 hypothetical protein 1407294 3785562 Nmul_A1223 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411918.1 1406824 R 323848 CDS YP_411919.1 82702353 3785563 complement(1407454..1408395) 1 NC_007614.1 hypothetical protein 1408395 3785563 Nmul_A1224 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411919.1 1407454 R 323848 CDS YP_411920.1 82702354 3785564 1408787..1409278 1 NC_007614.1 cytidine/deoxycytidylate deaminase zinc-binding subunit 1409278 3785564 Nmul_A1225 Nitrosospira multiformis ATCC 25196 cytidine/deoxycytidylate deaminase zinc-binding subunit YP_411920.1 1408787 D 323848 CDS YP_411921.1 82702355 3785565 1409268..1409747 1 NC_007614.1 ErfK/YbiS/YcfS/YnhG 1409747 3785565 Nmul_A1226 Nitrosospira multiformis ATCC 25196 ErfK/YbiS/YcfS/YnhG YP_411921.1 1409268 D 323848 CDS YP_411922.1 82702356 3785566 1410111..1411811 1 NC_007614.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1411811 pyrG 3785566 pyrG Nitrosospira multiformis ATCC 25196 CTP synthetase YP_411922.1 1410111 D 323848 CDS YP_411923.1 82702357 3785567 1411940..1413223 1 NC_007614.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1413223 eno 3785567 eno Nitrosospira multiformis ATCC 25196 phosphopyruvate hydratase YP_411923.1 1411940 D 323848 CDS YP_411924.1 82702358 3785568 1413262..1413570 1 NC_007614.1 septum formation initiator 1413570 3785568 Nmul_A1229 Nitrosospira multiformis ATCC 25196 septum formation initiator YP_411924.1 1413262 D 323848 CDS YP_411925.1 82702359 3785569 complement(1413630..1414535) 1 NC_007614.1 hypothetical protein 1414535 3785569 Nmul_A1230 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411925.1 1413630 R 323848 CDS YP_411926.1 82702360 3785570 complement(1414532..1415359) 1 NC_007614.1 ABC transporter-like protein 1415359 3785570 Nmul_A1231 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_411926.1 1414532 R 323848 CDS YP_411927.1 82702361 3785571 complement(1415331..1416374) 1 NC_007614.1 periplasmic solute binding protein 1416374 3785571 Nmul_A1232 Nitrosospira multiformis ATCC 25196 periplasmic solute binding protein YP_411927.1 1415331 R 323848 CDS YP_411928.1 82702362 3785572 1416608..1418725 1 NC_007614.1 TonB-dependent receptor 1418725 3785572 Nmul_A1233 Nitrosospira multiformis ATCC 25196 TonB-dependent receptor YP_411928.1 1416608 D 323848 CDS YP_411929.1 82702363 3785573 1418781..1419242 1 NC_007614.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 1419242 3785573 Nmul_A1234 Nitrosospira multiformis ATCC 25196 nickel responsive regulator YP_411929.1 1418781 D 323848 CDS YP_411930.1 82702364 3785574 complement(1419342..1419977) 1 NC_007614.1 two component LuxR family transcriptional regulator 1419977 3785574 Nmul_A1235 Nitrosospira multiformis ATCC 25196 two component LuxR family transcriptional regulator YP_411930.1 1419342 R 323848 CDS YP_411931.1 82702365 3785575 complement(1420012..1422090) 1 NC_007614.1 periplasmic sensor signal transduction histidine kinase 1422090 3785575 Nmul_A1236 Nitrosospira multiformis ATCC 25196 periplasmic sensor signal transduction histidine kinase YP_411931.1 1420012 R 323848 CDS YP_411932.1 82702366 3785576 1422290..1423714 1 NC_007614.1 hypothetical protein 1423714 3785576 Nmul_A1237 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411932.1 1422290 D 323848 CDS YP_411933.1 82702367 3785577 1423800..1424789 1 NC_007614.1 urease accessory protein UreD 1424789 3785577 Nmul_A1238 Nitrosospira multiformis ATCC 25196 urease accessory protein UreD YP_411933.1 1423800 D 323848 CDS YP_411934.1 82702368 3785578 1424884..1425186 1 NC_007614.1 urease subunit gamma 1425186 3785578 Nmul_A1239 Nitrosospira multiformis ATCC 25196 urease subunit gamma YP_411934.1 1424884 D 323848 CDS YP_411935.1 82702369 3785579 1425210..1425551 1 NC_007614.1 urease subunit beta 1425551 3785579 Nmul_A1240 Nitrosospira multiformis ATCC 25196 urease subunit beta YP_411935.1 1425210 D 323848 CDS YP_411936.1 82702370 3785580 1425586..1427292 1 NC_007614.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 1427292 ureC 3785580 ureC Nitrosospira multiformis ATCC 25196 urease subunit alpha YP_411936.1 1425586 D 323848 CDS YP_411937.1 82702371 3786018 1427302..1427832 1 NC_007614.1 UreE urease accessory-like 1427832 3786018 Nmul_A1242 Nitrosospira multiformis ATCC 25196 UreE urease accessory-like YP_411937.1 1427302 D 323848 CDS YP_411938.1 82702372 3786019 1427835..1428515 1 NC_007614.1 urease accessory protein UreF 1428515 3786019 Nmul_A1243 Nitrosospira multiformis ATCC 25196 urease accessory protein UreF YP_411938.1 1427835 D 323848 CDS YP_411939.1 82702373 3786020 1428535..1429176 1 NC_007614.1 urease accessory protein UreG 1429176 3786020 Nmul_A1244 Nitrosospira multiformis ATCC 25196 urease accessory protein UreG YP_411939.1 1428535 D 323848 CDS YP_411940.1 82702374 3786021 1429253..1430218 1 NC_007614.1 Urea transporter 1430218 3786021 Nmul_A1245 Nitrosospira multiformis ATCC 25196 Urea transporter YP_411940.1 1429253 D 323848 CDS YP_411941.1 82702375 3786022 complement(1430388..1433450) 1 NC_007614.1 transcriptional regulator 1433450 3786022 Nmul_A1246 Nitrosospira multiformis ATCC 25196 transcriptional regulator YP_411941.1 1430388 R 323848 CDS YP_411942.1 82702376 3786023 1433858..1434367 1 NC_007614.1 hypothetical protein 1434367 3786023 Nmul_A1247 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411942.1 1433858 D 323848 CDS YP_411943.1 82702377 3786024 complement(1434856..1435899) 1 NC_007614.1 integrase catalytic subunit 1435899 3786024 Nmul_A1248 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_411943.1 1434856 R 323848 CDS YP_411944.1 82702378 3786025 1436029..1436673 1 NC_007614.1 hypothetical protein 1436673 3786025 Nmul_A1249 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411944.1 1436029 D 323848 CDS YP_411945.1 82702379 3786026 complement(1436831..1437328) 1 NC_007614.1 hypothetical protein 1437328 3786026 Nmul_A1250 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411945.1 1436831 R 323848 CDS YP_411946.1 82702380 3786027 complement(1437431..1439116) 1 NC_007614.1 alpha amylase catalytic subunit 1439116 3786027 Nmul_A1251 Nitrosospira multiformis ATCC 25196 alpha amylase catalytic subunit YP_411946.1 1437431 R 323848 CDS YP_411947.1 82702381 3786028 complement(1439163..1440608) 1 NC_007614.1 amino acid permease-associated protein 1440608 3786028 Nmul_A1252 Nitrosospira multiformis ATCC 25196 amino acid permease-associated protein YP_411947.1 1439163 R 323848 CDS YP_411948.1 82702382 3786029 complement(1440816..1442849) 1 NC_007614.1 von Willebrand factor, type A 1442849 3786029 Nmul_A1253 Nitrosospira multiformis ATCC 25196 von Willebrand factor, type A YP_411948.1 1440816 R 323848 CDS YP_411949.1 82702383 3786030 complement(1442921..1443775) 1 NC_007614.1 ATPase 1443775 3786030 Nmul_A1254 Nitrosospira multiformis ATCC 25196 ATPase YP_411949.1 1442921 R 323848 CDS YP_411950.1 82702384 3786031 complement(1443776..1445167) 1 NC_007614.1 nitric-oxide reductase subunit B 1445167 3786031 Nmul_A1255 Nitrosospira multiformis ATCC 25196 nitric-oxide reductase subunit B YP_411950.1 1443776 R 323848 CDS YP_411951.1 82702385 3786032 complement(1445176..1445994) 1 NC_007614.1 cytochrome c, class I 1445994 3786032 Nmul_A1256 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_411951.1 1445176 R 323848 CDS YP_411952.1 82702386 3786033 1446390..1446680 1 NC_007614.1 hypothetical protein 1446680 3786033 Nmul_A1257 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411952.1 1446390 D 323848 CDS YP_411953.1 82702387 3786034 1447004..1447291 1 NC_007614.1 hypothetical protein 1447291 3786034 Nmul_A1258 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411953.1 1447004 D 323848 CDS YP_411954.1 82702388 3786035 complement(1448040..1448666) 1 NC_007614.1 hypothetical protein 1448666 3786035 Nmul_A1259 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411954.1 1448040 R 323848 CDS YP_411955.1 82702389 3786036 1449819..1452086 1 NC_007614.1 TonB-dependent siderophore receptor 1452086 3786036 Nmul_A1260 Nitrosospira multiformis ATCC 25196 TonB-dependent siderophore receptor YP_411955.1 1449819 D 323848 CDS YP_411956.1 82702390 3784276 complement(1452358..1453167) 1 NC_007614.1 hypothetical protein 1453167 3784276 Nmul_A1261 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411956.1 1452358 R 323848 CDS YP_411957.1 82702391 3784277 complement(1453465..1453716) 1 NC_007614.1 hypothetical protein 1453716 3784277 Nmul_A1262 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411957.1 1453465 R 323848 CDS YP_411958.1 82702392 3784278 complement(1453716..1455788) 1 NC_007614.1 carbon starvation protein CstA 1455788 3784278 Nmul_A1263 Nitrosospira multiformis ATCC 25196 carbon starvation protein CstA YP_411958.1 1453716 R 323848 CDS YP_411959.1 82702393 3784279 complement(1455922..1456503) 1 NC_007614.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1456503 3784279 Nmul_A1264 Nitrosospira multiformis ATCC 25196 3-methyladenine DNA glycosylase YP_411959.1 1455922 R 323848 CDS YP_411960.1 82702394 3784280 1456685..1457620 1 NC_007614.1 hypothetical protein 1457620 3784280 Nmul_A1265 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411960.1 1456685 D 323848 CDS YP_411961.1 82702395 3784281 complement(1457742..1458119) 1 NC_007614.1 hypothetical protein 1458119 3784281 Nmul_A1266 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411961.1 1457742 R 323848 CDS YP_411962.1 82702396 3784282 1458551..1459795 1 NC_007614.1 phosphate-selective porin O and P 1459795 3784282 Nmul_A1267 Nitrosospira multiformis ATCC 25196 phosphate-selective porin O and P YP_411962.1 1458551 D 323848 CDS YP_411963.1 82702397 3784283 complement(1459931..1460497) 1 NC_007614.1 translation elongation factor P 1460497 3784283 Nmul_A1268 Nitrosospira multiformis ATCC 25196 translation elongation factor P YP_411963.1 1459931 R 323848 CDS YP_411964.1 82702398 3784284 1460515..1461231 1 NC_007614.1 uracil-DNA glycosylase superfamily protein 1461231 3784284 Nmul_A1269 Nitrosospira multiformis ATCC 25196 uracil-DNA glycosylase superfamily protein YP_411964.1 1460515 D 323848 CDS YP_411965.1 82702399 3784285 1461272..1461460 1 NC_007614.1 4-oxalocrotonate tautomerase 1461460 3784285 Nmul_A1270 Nitrosospira multiformis ATCC 25196 4-oxalocrotonate tautomerase YP_411965.1 1461272 D 323848 CDS YP_411966.1 82702400 3784286 1461466..1463286 1 NC_007614.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1463286 uvrC 3784286 uvrC Nitrosospira multiformis ATCC 25196 excinuclease ABC subunit C YP_411966.1 1461466 D 323848 CDS YP_411967.1 82702401 3784287 1463368..1463940 1 NC_007614.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1463940 3784287 Nmul_A1272 Nitrosospira multiformis ATCC 25196 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_411967.1 1463368 D 323848 CDS YP_411968.1 82702402 3784288 1463933..1464244 1 NC_007614.1 hypothetical protein 1464244 3784288 Nmul_A1273 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411968.1 1463933 D 323848 CDS YP_411969.1 82702403 3784291 complement(1464889..1465128) 1 NC_007614.1 hypothetical protein 1465128 3784291 Nmul_A1274 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411969.1 1464889 R 323848 CDS YP_411970.1 82702404 3784292 complement(1465971..1466321) 1 NC_007614.1 hypothetical protein 1466321 3784292 Nmul_A1275 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411970.1 1465971 R 323848 CDS YP_411971.1 82702405 3784293 complement(1466620..1466964) 1 NC_007614.1 hypothetical protein 1466964 3784293 Nmul_A1276 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411971.1 1466620 R 323848 CDS YP_411972.1 82702406 3784314 1467532..1468971 1 NC_007614.1 hypothetical protein 1468971 3784314 Nmul_A1277 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411972.1 1467532 D 323848 CDS YP_411973.1 82702407 3784315 1468968..1470686 1 NC_007614.1 hypothetical protein 1470686 3784315 Nmul_A1278 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411973.1 1468968 D 323848 CDS YP_411974.1 82702408 3784316 1471007..1471546 1 NC_007614.1 response regulator receiver domain-containing protein 1471546 3784316 Nmul_A1279 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_411974.1 1471007 D 323848 CDS YP_411975.1 82702409 3784317 1471746..1473467 1 NC_007614.1 Type I secretion system ATPase PrtD 1473467 3784317 Nmul_A1280 Nitrosospira multiformis ATCC 25196 Type I secretion system ATPase PrtD YP_411975.1 1471746 D 323848 CDS YP_411976.1 82702410 3784318 1473568..1474932 1 NC_007614.1 Type I secretion membrane fusion protein HlyD 1474932 3784318 Nmul_A1281 Nitrosospira multiformis ATCC 25196 Type I secretion membrane fusion protein HlyD YP_411976.1 1473568 D 323848 CDS YP_411977.1 82702411 3784319 1474942..1476339 1 NC_007614.1 Type I secretion outer membrane protein TolC 1476339 3784319 Nmul_A1282 Nitrosospira multiformis ATCC 25196 Type I secretion outer membrane protein TolC YP_411977.1 1474942 D 323848 CDS YP_411978.1 82702412 3784320 1476518..1476958 1 NC_007614.1 hypothetical protein 1476958 3784320 Nmul_A1283 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411978.1 1476518 D 323848 CDS YP_411979.1 82702413 3784321 complement(1477111..1477971) 1 NC_007614.1 hypothetical protein 1477971 3784321 Nmul_A1284 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411979.1 1477111 R 323848 CDS YP_411980.1 82702414 3784322 complement(1477977..1478318) 1 NC_007614.1 hypothetical protein 1478318 3784322 Nmul_A1285 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411980.1 1477977 R 323848 CDS YP_411981.1 82702415 3784323 complement(1478446..1479075) 1 NC_007614.1 phage SPO1 DNA polymerase-like protein 1479075 3784323 Nmul_A1286 Nitrosospira multiformis ATCC 25196 phage SPO1 DNA polymerase-like protein YP_411981.1 1478446 R 323848 CDS YP_411982.1 82702416 3784324 complement(1479126..1480838) 1 NC_007614.1 multi-sensor signal transduction histidine kinase 1480838 3784324 Nmul_A1287 Nitrosospira multiformis ATCC 25196 multi-sensor signal transduction histidine kinase YP_411982.1 1479126 R 323848 CDS YP_411983.1 82702417 3784325 complement(1480884..1481297) 1 NC_007614.1 response regulator receiver domain-containing protein 1481297 3784325 Nmul_A1288 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_411983.1 1480884 R 323848 CDS YP_411984.1 82702418 3784326 complement(1481294..1483282) 1 NC_007614.1 multi-sensor signal transduction histidine kinase 1483282 3784326 Nmul_A1289 Nitrosospira multiformis ATCC 25196 multi-sensor signal transduction histidine kinase YP_411984.1 1481294 R 323848 CDS YP_411985.1 82702419 3784327 1483681..1484301 1 NC_007614.1 hypothetical protein 1484301 3784327 Nmul_A1290 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411985.1 1483681 D 323848 CDS YP_411986.1 82702420 3784328 complement(1484606..1484809) 1 NC_007614.1 cold-shock DNA-binding domain-containing protein 1484809 3784328 Nmul_A1291 Nitrosospira multiformis ATCC 25196 cold-shock DNA-binding domain-containing protein YP_411986.1 1484606 R 323848 CDS YP_411987.1 82702421 3784329 1485371..1486390 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 1486390 3784329 Nmul_A1292 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_411987.1 1485371 D 323848 CDS YP_411988.1 82702422 3784330 complement(1486405..1486956) 1 NC_007614.1 hypothetical protein 1486956 3784330 Nmul_A1293 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411988.1 1486405 R 323848 CDS YP_411989.1 82702423 3784331 1488400..1488672 1 NC_007614.1 hypothetical protein 1488672 3784331 Nmul_A1294 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411989.1 1488400 D 323848 CDS YP_411990.1 82702424 3786250 complement(1489080..1489949) 1 NC_007614.1 integrase catalytic subunit 1489949 3786250 Nmul_A1295 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_411990.1 1489080 R 323848 CDS YP_411991.1 82702425 3786251 complement(1489946..1490233) 1 NC_007614.1 transposase IS3/IS911 1490233 3786251 Nmul_A1296 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_411991.1 1489946 R 323848 CDS YP_411992.1 82702426 3786252 1490270..1490581 1 NC_007614.1 hypothetical protein 1490581 3786252 Nmul_A1297 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411992.1 1490270 D 323848 CDS YP_411993.1 82702427 3786253 complement(1490615..1490962) 1 NC_007614.1 transposase IS4 1490962 3786253 Nmul_A1298 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_411993.1 1490615 R 323848 CDS YP_411994.1 82702428 3786254 complement(1491004..1491372) 1 NC_007614.1 transposase 1491372 3786254 Nmul_A1299 Nitrosospira multiformis ATCC 25196 transposase YP_411994.1 1491004 R 323848 CDS YP_411995.1 82702429 3786255 1491478..1491741 1 NC_007614.1 transposase IS3/IS911 1491741 3786255 Nmul_A1300 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_411995.1 1491478 D 323848 CDS YP_411996.1 82702430 3786256 1491768..1492598 1 NC_007614.1 integrase catalytic subunit 1492598 3786256 Nmul_A1301 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_411996.1 1491768 D 323848 CDS YP_411997.1 82702431 3786257 complement(1493468..1493746) 1 NC_007614.1 hypothetical protein 1493746 3786257 Nmul_A1302 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411997.1 1493468 R 323848 CDS YP_411998.1 82702432 3786258 1493825..1494292 1 NC_007614.1 hypothetical protein 1494292 3786258 Nmul_A1303 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411998.1 1493825 D 323848 CDS YP_411999.1 82702433 3786259 complement(1494736..1495212) 1 NC_007614.1 hypothetical protein 1495212 3786259 Nmul_A1304 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_411999.1 1494736 R 323848 CDS YP_412000.1 82702434 3786260 1496041..1496358 1 NC_007614.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 1496358 3786260 Nmul_A1305 Nitrosospira multiformis ATCC 25196 transcriptional activator FlhD YP_412000.1 1496041 D 323848 CDS YP_412001.1 82702435 3786261 1496442..1496987 1 NC_007614.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 1496987 3786261 Nmul_A1306 Nitrosospira multiformis ATCC 25196 transcriptional activator FlhC YP_412001.1 1496442 D 323848 CDS YP_412002.1 82702436 3786262 1497351..1498211 1 NC_007614.1 chemotaxis (motility protein A) transmembrane 1498211 3786262 Nmul_A1307 Nitrosospira multiformis ATCC 25196 chemotaxis (motility protein A) transmembrane YP_412002.1 1497351 D 323848 CDS YP_412003.1 82702437 3786263 1498233..1499159 1 NC_007614.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 1499159 motB 3786263 motB Nitrosospira multiformis ATCC 25196 flagellar motor protein MotB YP_412003.1 1498233 D 323848 CDS YP_412004.1 82702438 3786264 1499443..1500621 1 NC_007614.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1500621 flhB 3786264 flhB Nitrosospira multiformis ATCC 25196 flagellar biosynthesis protein FlhB YP_412004.1 1499443 D 323848 CDS YP_412005.1 82702439 3786265 1500624..1502702 1 NC_007614.1 flagellar biosynthesis protein FlhA 1502702 3786265 Nmul_A1310 Nitrosospira multiformis ATCC 25196 flagellar biosynthesis protein FlhA YP_412005.1 1500624 D 323848 CDS YP_412006.1 82702440 3786266 1502699..1504411 1 NC_007614.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 1504411 flhF 3786266 flhF Nitrosospira multiformis ATCC 25196 flagellar biosynthesis regulator FlhF YP_412006.1 1502699 D 323848 CDS YP_412007.1 82702441 3786267 1504368..1505297 1 NC_007614.1 putative MinD-like protein 1505297 3786267 Nmul_A1312 Nitrosospira multiformis ATCC 25196 putative MinD-like protein YP_412007.1 1504368 D 323848 CDS YP_412008.1 82702442 3786268 1505309..1506037 1 NC_007614.1 sigma 28 (flagella/sporulation) 1506037 3786268 Nmul_A1313 Nitrosospira multiformis ATCC 25196 sigma 28 (flagella/sporulation) YP_412008.1 1505309 D 323848 CDS YP_412009.1 82702443 3783935 1506019..1506759 1 NC_007614.1 homologous to MotA; this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; these organisms have both MotA and MotC; flagellar motor protein 1506759 motC 3783935 motC Nitrosospira multiformis ATCC 25196 flagellar motor protein YP_412009.1 1506019 D 323848 CDS YP_412010.1 82702444 3783936 1507133..1507999 1 NC_007614.1 Homologous to MotB. These organism have both MotB and MotD. With MotC (a MotA homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. Either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; flagellar motor protein MotD 1507999 3783936 Nmul_A1315 Nitrosospira multiformis ATCC 25196 flagellar motor protein MotD YP_412010.1 1507133 D 323848 CDS YP_412011.1 82702445 3783937 complement(1508532..1509005) 1 NC_007614.1 FlgN 1509005 3783937 Nmul_A1316 Nitrosospira multiformis ATCC 25196 FlgN YP_412011.1 1508532 R 323848 CDS YP_412012.1 82702446 3783938 complement(1509008..1509445) 1 NC_007614.1 anti-sigma-28 factor FlgM 1509445 3783938 Nmul_A1317 Nitrosospira multiformis ATCC 25196 anti-sigma-28 factor FlgM YP_412012.1 1509008 R 323848 CDS YP_412013.1 82702447 3783939 complement(1509495..1510241) 1 NC_007614.1 flageller protein FlgA 1510241 3783939 Nmul_A1318 Nitrosospira multiformis ATCC 25196 flageller protein FlgA YP_412013.1 1509495 R 323848 CDS YP_412014.1 82702448 3783940 complement(1510413..1510754) 1 NC_007614.1 transposase IS4 1510754 3783940 Nmul_A1319 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_412014.1 1510413 R 323848 CDS YP_412015.1 82702449 3783941 complement(1510802..1511170) 1 NC_007614.1 transposase 1511170 3783941 Nmul_A1320 Nitrosospira multiformis ATCC 25196 transposase YP_412015.1 1510802 R 323848 CDS YP_412016.1 82702450 3783942 1511468..1511872 1 NC_007614.1 flagellar basal-body rod protein FlgB 1511872 3783942 Nmul_A1321 Nitrosospira multiformis ATCC 25196 flagellar basal-body rod protein FlgB YP_412016.1 1511468 D 323848 CDS YP_412017.1 82702451 3783943 1511886..1512305 1 NC_007614.1 flagellar basal-body rod protein FlgC 1512305 3783943 Nmul_A1322 Nitrosospira multiformis ATCC 25196 flagellar basal-body rod protein FlgC YP_412017.1 1511886 D 323848 CDS YP_412018.1 82702452 3783944 1512315..1512983 1 NC_007614.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 1512983 flgD 3783944 flgD Nitrosospira multiformis ATCC 25196 flagellar basal body rod modification protein YP_412018.1 1512315 D 323848 CDS YP_412019.1 82702453 3783945 1513087..1514307 1 NC_007614.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1514307 flgE 3783945 flgE Nitrosospira multiformis ATCC 25196 flagellar hook protein FlgE YP_412019.1 1513087 D 323848 CDS YP_412020.1 82702454 3783946 1514338..1515090 1 NC_007614.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 1515090 flgF 3783946 flgF Nitrosospira multiformis ATCC 25196 flagellar basal body rod protein FlgF YP_412020.1 1514338 D 323848 CDS YP_412021.1 82702455 3783947 1515185..1515967 1 NC_007614.1 hypothetical protein 1515967 3783947 Nmul_A1326 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412021.1 1515185 D 323848 CDS YP_412022.1 82702456 3783948 1516045..1516737 1 NC_007614.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein 1516737 flgH 3783948 flgH Nitrosospira multiformis ATCC 25196 flagellar basal body L-ring protein YP_412022.1 1516045 D 323848 CDS YP_412023.1 82702457 3783949 1516756..1517889 1 NC_007614.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1517889 flgI 3783949 flgI Nitrosospira multiformis ATCC 25196 flagellar basal body P-ring protein YP_412023.1 1516756 D 323848 CDS YP_412024.1 82702458 3783950 1517889..1518941 1 NC_007614.1 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 1518941 3783950 Nmul_A1329 Nitrosospira multiformis ATCC 25196 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_412024.1 1517889 D 323848 CDS YP_412025.1 82702459 3783951 1519093..1521009 1 NC_007614.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 1521009 flgK 3783951 flgK Nitrosospira multiformis ATCC 25196 flagellar hook-associated protein FlgK YP_412025.1 1519093 D 323848 CDS YP_412026.1 82702460 3783952 1521136..1522071 1 NC_007614.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella; flagellar hook-associated protein FlgL 1522071 flgL 3783952 flgL Nitrosospira multiformis ATCC 25196 flagellar hook-associated protein FlgL YP_412026.1 1521136 D 323848 CDS YP_412027.1 82702461 3783953 1522239..1523513 1 NC_007614.1 diguanylate phosphodiesterase 1523513 3783953 Nmul_A1332 Nitrosospira multiformis ATCC 25196 diguanylate phosphodiesterase YP_412027.1 1522239 D 323848 CDS YP_412028.1 82702462 3785059 1523610..1524005 1 NC_007614.1 hypothetical protein 1524005 3785059 Nmul_A1333 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412028.1 1523610 D 323848 CDS YP_412029.1 82702463 3785060 1524099..1525043 1 NC_007614.1 histidine kinase, dimerisation and phosphoacceptor region 1525043 3785060 Nmul_A1334 Nitrosospira multiformis ATCC 25196 histidine kinase, dimerisation and phosphoacceptor region YP_412029.1 1524099 D 323848 CDS YP_412030.1 82702464 3785061 1525016..1525540 1 NC_007614.1 putative signal transduction histidine kinase 1525540 3785061 Nmul_A1335 Nitrosospira multiformis ATCC 25196 putative signal transduction histidine kinase YP_412030.1 1525016 D 323848 CDS YP_412031.1 82702465 3785062 1525537..1526163 1 NC_007614.1 two component LuxR family transcriptional regulator 1526163 3785062 Nmul_A1336 Nitrosospira multiformis ATCC 25196 two component LuxR family transcriptional regulator YP_412031.1 1525537 D 323848 CDS YP_412032.1 82702466 3785063 1526739..1527905 1 NC_007614.1 flagellin-like 1527905 3785063 Nmul_A1337 Nitrosospira multiformis ATCC 25196 flagellin-like YP_412032.1 1526739 D 323848 CDS YP_412033.1 82702467 3785064 1528003..1528341 1 NC_007614.1 flagellar protein FlaG protein 1528341 3785064 Nmul_A1338 Nitrosospira multiformis ATCC 25196 flagellar protein FlaG protein YP_412033.1 1528003 D 323848 CDS YP_412034.1 82702468 3785065 1528393..1530402 1 NC_007614.1 flagellar hook-associated 2-like 1530402 3785065 Nmul_A1339 Nitrosospira multiformis ATCC 25196 flagellar hook-associated 2-like YP_412034.1 1528393 D 323848 CDS YP_412035.1 82702469 3785066 1530418..1530882 1 NC_007614.1 flagellar protein FliS 1530882 3785066 Nmul_A1340 Nitrosospira multiformis ATCC 25196 flagellar protein FliS YP_412035.1 1530418 D 323848 CDS YP_412036.1 82702470 3785067 1530882..1531223 1 NC_007614.1 flagellar protein FliT 1531223 3785067 Nmul_A1341 Nitrosospira multiformis ATCC 25196 flagellar protein FliT YP_412036.1 1530882 D 323848 CDS YP_412037.1 82702471 3785068 1531654..1532607 1 NC_007614.1 hypothetical protein 1532607 3785068 Nmul_A1342 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412037.1 1531654 D 323848 CDS YP_412038.1 82702472 3785069 1532585..1532890 1 NC_007614.1 flagellar biosynthetic protein-like protein 1532890 3785069 Nmul_A1343 Nitrosospira multiformis ATCC 25196 flagellar biosynthetic protein-like protein YP_412038.1 1532585 D 323848 CDS YP_412039.1 82702473 3785070 complement(1532887..1533234) 1 NC_007614.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1533234 fliE 3785070 fliE Nitrosospira multiformis ATCC 25196 flagellar hook-basal body protein FliE YP_412039.1 1532887 R 323848 CDS YP_412040.1 82702474 3785071 1533449..1535152 1 NC_007614.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1535152 fliF 3785071 fliF Nitrosospira multiformis ATCC 25196 flagellar MS-ring protein YP_412040.1 1533449 D 323848 CDS YP_412041.1 82702475 3785072 1535145..1536143 1 NC_007614.1 flagellar motor switch protein FliG 1536143 3785072 Nmul_A1346 Nitrosospira multiformis ATCC 25196 flagellar motor switch protein FliG YP_412041.1 1535145 D 323848 CDS YP_412042.1 82702476 3785073 1536140..1536895 1 NC_007614.1 flagellar assembly protein FliH 1536895 3785073 Nmul_A1347 Nitrosospira multiformis ATCC 25196 flagellar assembly protein FliH YP_412042.1 1536140 D 323848 CDS YP_412043.1 82702477 3785074 1536895..1538307 1 NC_007614.1 ATPase FliI/YscN 1538307 3785074 Nmul_A1348 Nitrosospira multiformis ATCC 25196 ATPase FliI/YscN YP_412043.1 1536895 D 323848 CDS YP_412044.1 82702478 3785075 1538341..1538787 1 NC_007614.1 flagellar biosynthesis chaperone FliJ-like protein 1538787 3785075 Nmul_A1349 Nitrosospira multiformis ATCC 25196 flagellar biosynthesis chaperone FliJ-like protein YP_412044.1 1538341 D 323848 CDS YP_412045.1 82702479 3785076 1538841..1540283 1 NC_007614.1 flagellar hook-length control protein 1540283 3785076 Nmul_A1350 Nitrosospira multiformis ATCC 25196 flagellar hook-length control protein YP_412045.1 1538841 D 323848 CDS YP_412046.1 82702480 3785077 1540460..1540960 1 NC_007614.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1540960 fliL 3785077 fliL Nitrosospira multiformis ATCC 25196 flagellar basal body-associated protein FliL YP_412046.1 1540460 D 323848 CDS YP_412047.1 82702481 3785078 1540965..1541945 1 NC_007614.1 flagellar motor switch protein FliM 1541945 3785078 Nmul_A1352 Nitrosospira multiformis ATCC 25196 flagellar motor switch protein FliM YP_412047.1 1540965 D 323848 CDS YP_412048.1 82702482 3786496 1541938..1542393 1 NC_007614.1 surface presentation of antigens (SPOA) protein 1542393 3786496 Nmul_A1353 Nitrosospira multiformis ATCC 25196 surface presentation of antigens (SPOA) protein YP_412048.1 1541938 D 323848 CDS YP_412049.1 82702483 3786497 1542396..1542875 1 NC_007614.1 flagellar biosynthesis protein, FliO 1542875 3786497 Nmul_A1354 Nitrosospira multiformis ATCC 25196 flagellar biosynthesis protein, FliO YP_412049.1 1542396 D 323848 CDS YP_412050.1 82702484 3786498 1542865..1543653 1 NC_007614.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1543653 fliP 3786498 fliP Nitrosospira multiformis ATCC 25196 flagellar biosynthesis protein FliP YP_412050.1 1542865 D 323848 CDS YP_412051.1 82702485 3786499 1543699..1543968 1 NC_007614.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1543968 fliQ 3786499 fliQ Nitrosospira multiformis ATCC 25196 flagellar biosynthesis protein FliQ YP_412051.1 1543699 D 323848 CDS YP_412052.1 82702486 3786500 1544079..1544861 1 NC_007614.1 flagellar biosynthetic protein FliR 1544861 3786500 Nmul_A1357 Nitrosospira multiformis ATCC 25196 flagellar biosynthetic protein FliR YP_412052.1 1544079 D 323848 CDS YP_412053.1 82702487 3786501 complement(1544864..1545313) 1 NC_007614.1 hypothetical protein 1545313 3786501 Nmul_A1358 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412053.1 1544864 R 323848 CDS YP_412054.1 82702488 3786502 1545784..1546428 1 NC_007614.1 hypothetical protein 1546428 3786502 Nmul_A1359 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412054.1 1545784 D 323848 CDS YP_412055.1 82702489 3786503 complement(1546652..1547845) 1 NC_007614.1 class I and II aminotransferase 1547845 3786503 Nmul_A1360 Nitrosospira multiformis ATCC 25196 class I and II aminotransferase YP_412055.1 1546652 R 323848 CDS YP_412056.1 82702490 3786504 1548172..1550259 1 NC_007614.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1550259 3786504 Nmul_A1361 Nitrosospira multiformis ATCC 25196 excinuclease ABC subunit B YP_412056.1 1548172 D 323848 CDS YP_412057.1 82702491 3786505 complement(1550301..1550681) 1 NC_007614.1 hypothetical protein 1550681 3786505 Nmul_A1362 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412057.1 1550301 R 323848 CDS YP_412058.1 82702492 3786506 complement(1550766..1551269) 1 NC_007614.1 hypothetical protein 1551269 3786506 Nmul_A1363 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412058.1 1550766 R 323848 CDS YP_412059.1 82702493 3786507 complement(1551943..1552365) 1 NC_007614.1 lytic transglycosylase catalytic subunit 1552365 3786507 Nmul_A1364 Nitrosospira multiformis ATCC 25196 lytic transglycosylase catalytic subunit YP_412059.1 1551943 R 323848 CDS YP_412060.1 82702494 3786508 1552696..1552944 1 NC_007614.1 hypothetical protein 1552944 3786508 Nmul_A1365 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412060.1 1552696 D 323848 CDS YP_412061.1 82702495 3786509 1553086..1553829 1 NC_007614.1 glycosyl transferase family protein 1553829 3786509 Nmul_A1366 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_412061.1 1553086 D 323848 CDS YP_412062.1 82702496 3786510 1553907..1554395 1 NC_007614.1 hypothetical protein 1554395 3786510 Nmul_A1367 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412062.1 1553907 D 323848 CDS YP_412063.1 82702497 3786511 1555152..1556345 1 NC_007614.1 flavin-containing monooxygenase FMO 1556345 3786511 Nmul_A1368 Nitrosospira multiformis ATCC 25196 flavin-containing monooxygenase FMO YP_412063.1 1555152 D 323848 CDS YP_412064.1 82702498 3786512 complement(1556526..1556744) 1 NC_007614.1 hypothetical protein 1556744 3786512 Nmul_A1369 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412064.1 1556526 R 323848 CDS YP_412065.1 82702499 3786513 complement(1556853..1557542) 1 NC_007614.1 ThiJ/PfpI 1557542 3786513 Nmul_A1370 Nitrosospira multiformis ATCC 25196 ThiJ/PfpI YP_412065.1 1556853 R 323848 CDS YP_412066.1 82702500 3786514 1557647..1558642 1 NC_007614.1 zinc-containing alcohol dehydrogenase superfamily protein 1558642 3786514 Nmul_A1371 Nitrosospira multiformis ATCC 25196 zinc-containing alcohol dehydrogenase superfamily protein YP_412066.1 1557647 D 323848 CDS YP_412067.1 82702501 3784467 complement(1558646..1559047) 1 NC_007614.1 glutathione-dependent formaldehyde-activating protein 1559047 3784467 Nmul_A1372 Nitrosospira multiformis ATCC 25196 glutathione-dependent formaldehyde-activating protein YP_412067.1 1558646 R 323848 CDS YP_412068.1 82702502 3784468 complement(1559121..1565051) 1 NC_007614.1 integrins alpha chain 1565051 3784468 Nmul_A1373 Nitrosospira multiformis ATCC 25196 integrins alpha chain YP_412068.1 1559121 R 323848 CDS YP_412069.1 82702503 3784469 complement(1565077..1569165) 1 NC_007614.1 hypothetical protein 1569165 3784469 Nmul_A1374 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412069.1 1565077 R 323848 CDS YP_412070.1 82702504 3784470 complement(1569472..1569873) 1 NC_007614.1 glyoxalase/bleomycin resistance protein/dioxygenase 1569873 3784470 Nmul_A1375 Nitrosospira multiformis ATCC 25196 glyoxalase/bleomycin resistance protein/dioxygenase YP_412070.1 1569472 R 323848 CDS YP_412071.1 82702505 3784471 complement(1569942..1570598) 1 NC_007614.1 MgtC/SapB transporter 1570598 3784471 Nmul_A1376 Nitrosospira multiformis ATCC 25196 MgtC/SapB transporter YP_412071.1 1569942 R 323848 CDS YP_412072.1 82702506 3784472 complement(1571530..1571700) 1 NC_007614.1 hypothetical protein 1571700 3784472 Nmul_A1377 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412072.1 1571530 R 323848 CDS YP_412073.1 82702507 3784473 complement(1571728..1572471) 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 1572471 3784473 Nmul_A1378 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_412073.1 1571728 R 323848 CDS YP_412074.1 82702508 3784474 complement(1572599..1573003) 1 NC_007614.1 glyoxalase/bleomycin resistance protein/dioxygenase 1573003 3784474 Nmul_A1379 Nitrosospira multiformis ATCC 25196 glyoxalase/bleomycin resistance protein/dioxygenase YP_412074.1 1572599 R 323848 CDS YP_412075.1 82702509 3784475 complement(1573007..1573657) 1 NC_007614.1 ankyrin 1573657 3784475 Nmul_A1380 Nitrosospira multiformis ATCC 25196 ankyrin YP_412075.1 1573007 R 323848 CDS YP_412076.1 82702510 3784476 complement(1573661..1574425) 1 NC_007614.1 TatD-related deoxyribonuclease 1574425 3784476 Nmul_A1381 Nitrosospira multiformis ATCC 25196 TatD-related deoxyribonuclease YP_412076.1 1573661 R 323848 CDS YP_412077.1 82702511 3784477 complement(1574900..1575907) 1 NC_007614.1 Phage integrase 1575907 3784477 Nmul_A1382 Nitrosospira multiformis ATCC 25196 Phage integrase YP_412077.1 1574900 R 323848 CDS YP_412078.1 82702512 3784478 1576095..1577237 1 NC_007614.1 hypothetical protein 1577237 3784478 Nmul_A1383 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412078.1 1576095 D 323848 CDS YP_412079.1 82702513 3784479 complement(1577212..1577568) 1 NC_007614.1 hypothetical protein 1577568 3784479 Nmul_A1384 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412079.1 1577212 R 323848 CDS YP_412080.1 82702514 3784480 1577679..1577942 1 NC_007614.1 putative transposase 1577942 3784480 Nmul_A1385 Nitrosospira multiformis ATCC 25196 putative transposase YP_412080.1 1577679 D 323848 CDS YP_412081.1 82702515 3784481 complement(1578235..1579341) 1 NC_007614.1 DNA polymerase III subunit delta' 1579341 3784481 Nmul_A1386 Nitrosospira multiformis ATCC 25196 DNA polymerase III subunit delta' YP_412081.1 1578235 R 323848 CDS YP_412082.1 82702516 3784482 complement(1579338..1579955) 1 NC_007614.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1579955 tmk 3784482 tmk Nitrosospira multiformis ATCC 25196 thymidylate kinase YP_412082.1 1579338 R 323848 CDS YP_412083.1 82702517 3784483 1580216..1580962 1 NC_007614.1 hypothetical protein 1580962 3784483 Nmul_A1388 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412083.1 1580216 D 323848 CDS YP_412084.1 82702518 3784484 complement(1581009..1581536) 1 NC_007614.1 hypothetical protein 1581536 3784484 Nmul_A1389 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412084.1 1581009 R 323848 CDS YP_412085.1 82702519 3784485 1581954..1583093 1 NC_007614.1 hypothetical protein 1583093 3784485 Nmul_A1390 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412085.1 1581954 D 323848 CDS YP_412086.1 82702520 3784486 1583207..1583512 1 NC_007614.1 hypothetical protein 1583512 3784486 Nmul_A1391 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412086.1 1583207 D 323848 CDS YP_412087.1 82702521 3786422 complement(1583745..1585163) 1 NC_007614.1 hypothetical protein 1585163 3786422 Nmul_A1392 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412087.1 1583745 R 323848 CDS YP_412088.1 82702522 3786423 1585645..1589634 1 NC_007614.1 ATP-dependent helicase HrpA 1589634 3786423 Nmul_A1393 Nitrosospira multiformis ATCC 25196 ATP-dependent helicase HrpA YP_412088.1 1585645 D 323848 CDS YP_412089.1 82702523 3786424 complement(1589682..1590608) 1 NC_007614.1 aldose 1-epimerase 1590608 3786424 Nmul_A1394 Nitrosospira multiformis ATCC 25196 aldose 1-epimerase YP_412089.1 1589682 R 323848 CDS YP_412090.1 82702524 3786425 complement(1590720..1591157) 1 NC_007614.1 hypothetical protein 1591157 3786425 Nmul_A1395 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412090.1 1590720 R 323848 CDS YP_412091.1 82702525 3786426 complement(1591266..1591829) 1 NC_007614.1 maltose O-acetyltransferase 1591829 3786426 Nmul_A1396 Nitrosospira multiformis ATCC 25196 maltose O-acetyltransferase YP_412091.1 1591266 R 323848 CDS YP_412092.1 82702526 3786427 complement(1591937..1592350) 1 NC_007614.1 putative transcriptional regulator 1592350 3786427 Nmul_A1397 Nitrosospira multiformis ATCC 25196 putative transcriptional regulator YP_412092.1 1591937 R 323848 CDS YP_412093.1 82702527 3786428 1592557..1593132 1 NC_007614.1 similar to Nitrosospira sp. NpAV ORF4 in GenBank Accession Number U92432; hypothetical protein 1593132 3786428 Nmul_A1398 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412093.1 1592557 D 323848 CDS YP_412094.1 82702528 3786429 1594061..1595464 1 NC_007614.1 patatin 1595464 3786429 Nmul_A1399 Nitrosospira multiformis ATCC 25196 patatin YP_412094.1 1594061 D 323848 CDS YP_412095.1 82702529 3786430 1595520..1596560 1 NC_007614.1 zinc-containing alcohol dehydrogenase superfamily protein 1596560 3786430 Nmul_A1400 Nitrosospira multiformis ATCC 25196 zinc-containing alcohol dehydrogenase superfamily protein YP_412095.1 1595520 D 323848 CDS YP_412096.1 82702530 3786431 1597609..1599714 1 NC_007614.1 glycogen debranching protein GlgX 1599714 3786431 Nmul_A1401 Nitrosospira multiformis ATCC 25196 glycogen debranching protein GlgX YP_412096.1 1597609 D 323848 CDS YP_412097.1 82702531 3786432 complement(1599755..1604947) 1 NC_007614.1 amylomaltase; acts to release glucose from maltodextrins; putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase 1604947 3786432 Nmul_A1402 Nitrosospira multiformis ATCC 25196 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase YP_412097.1 1599755 R 323848 CDS YP_412098.1 82702532 3786433 complement(1605003..1606880) 1 NC_007614.1 alpha amylase catalytic subunit 1606880 3786433 Nmul_A1403 Nitrosospira multiformis ATCC 25196 alpha amylase catalytic subunit YP_412098.1 1605003 R 323848 CDS YP_412099.1 82702533 3786434 complement(1606903..1610205) 1 NC_007614.1 alpha amylase catalytic subunit 1610205 3786434 Nmul_A1404 Nitrosospira multiformis ATCC 25196 alpha amylase catalytic subunit YP_412099.1 1606903 R 323848 CDS YP_412100.1 82702534 3786435 complement(1610207..1610593) 1 NC_007614.1 hypothetical protein 1610593 3786435 Nmul_A1405 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412100.1 1610207 R 323848 CDS YP_412101.1 82702535 3786436 complement(1610966..1614145) 1 NC_007614.1 heavy metal efflux pump CzcA 1614145 3786436 Nmul_A1406 Nitrosospira multiformis ATCC 25196 heavy metal efflux pump CzcA YP_412101.1 1610966 R 323848 CDS YP_412102.1 82702536 3786437 complement(1614147..1615769) 1 NC_007614.1 secretion protein HlyD 1615769 3786437 Nmul_A1407 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_412102.1 1614147 R 323848 CDS YP_412103.1 82702537 3786438 complement(1615766..1617166) 1 NC_007614.1 Outer membrane efflux protein 1617166 3786438 Nmul_A1408 Nitrosospira multiformis ATCC 25196 Outer membrane efflux protein YP_412103.1 1615766 R 323848 CDS YP_412104.1 82702538 3786439 1617774..1618064 1 NC_007614.1 hypothetical protein 1618064 3786439 Nmul_A1409 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412104.1 1617774 D 323848 CDS YP_412105.1 82702539 3786440 1618351..1619157 1 NC_007614.1 hypothetical protein 1619157 3786440 Nmul_A1410 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412105.1 1618351 D 323848 CDS YP_412106.1 82702540 3786609 1619649..1620089 1 NC_007614.1 hypothetical protein 1620089 3786609 Nmul_A1411 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412106.1 1619649 D 323848 CDS YP_412107.1 82702541 3786610 1620732..1622708 1 NC_007614.1 helicase c2 1622708 3786610 Nmul_A1412 Nitrosospira multiformis ATCC 25196 helicase c2 YP_412107.1 1620732 D 323848 CDS YP_412108.1 82702542 3786611 1622747..1623427 1 NC_007614.1 hypothetical protein 1623427 3786611 Nmul_A1413 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412108.1 1622747 D 323848 CDS YP_412109.1 82702543 3786612 complement(1623609..1623842) 1 NC_007614.1 hypothetical protein 1623842 3786612 Nmul_A1414 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412109.1 1623609 R 323848 CDS YP_412110.1 82702544 3786613 1624379..1624996 1 NC_007614.1 hypothetical protein 1624996 3786613 Nmul_A1415 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412110.1 1624379 D 323848 CDS YP_412111.1 82702545 3786614 1625114..1625416 1 NC_007614.1 hypothetical protein 1625416 3786614 Nmul_A1416 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412111.1 1625114 D 323848 CDS YP_412112.1 82702546 3786615 complement(1625469..1627406) 1 NC_007614.1 AMP-dependent synthetase and ligase 1627406 3786615 Nmul_A1417 Nitrosospira multiformis ATCC 25196 AMP-dependent synthetase and ligase YP_412112.1 1625469 R 323848 CDS YP_412113.1 82702547 3786616 complement(1628212..1629024) 1 NC_007614.1 hypothetical protein 1629024 3786616 Nmul_A1418 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412113.1 1628212 R 323848 CDS YP_412114.1 82702548 3786617 complement(1629247..1630356) 1 NC_007614.1 hypothetical protein 1630356 3786617 Nmul_A1419 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412114.1 1629247 R 323848 CDS YP_412115.1 82702549 3786618 complement(1630361..1631524) 1 NC_007614.1 hypothetical protein 1631524 3786618 Nmul_A1420 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412115.1 1630361 R 323848 CDS YP_412116.1 82702550 3786619 complement(1631521..1633320) 1 NC_007614.1 ABC transporter-like protein 1633320 3786619 Nmul_A1421 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412116.1 1631521 R 323848 CDS YP_412117.1 82702551 3786620 complement(1633332..1634411) 1 NC_007614.1 secretion protein HlyD 1634411 3786620 Nmul_A1422 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_412117.1 1633332 R 323848 CDS YP_412118.1 82702552 3786621 complement(1634389..1634838) 1 NC_007614.1 hypothetical protein 1634838 3786621 Nmul_A1423 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412118.1 1634389 R 323848 CDS YP_412119.1 82702553 3786622 1634947..1636146 1 NC_007614.1 hypothetical protein 1636146 3786622 Nmul_A1424 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412119.1 1634947 D 323848 CDS YP_412120.1 82702554 3786623 complement(1636167..1636979) 1 NC_007614.1 hypothetical protein 1636979 3786623 Nmul_A1425 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412120.1 1636167 R 323848 CDS YP_412121.1 82702555 3786624 complement(1637326..1639488) 1 NC_007614.1 TonB-dependent receptor 1639488 3786624 Nmul_A1426 Nitrosospira multiformis ATCC 25196 TonB-dependent receptor YP_412121.1 1637326 R 323848 CDS YP_412122.1 82702556 3786625 complement(1639641..1640102) 1 NC_007614.1 hypothetical protein 1640102 3786625 Nmul_A1427 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412122.1 1639641 R 323848 CDS YP_412123.1 82702557 3786626 complement(1640319..1641362) 1 NC_007614.1 integrase catalytic subunit 1641362 3786626 Nmul_A1428 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412123.1 1640319 R 323848 CDS YP_412124.1 82702558 3786627 1641545..1642762 1 NC_007614.1 O-antigen polymerase 1642762 3786627 Nmul_A1429 Nitrosospira multiformis ATCC 25196 O-antigen polymerase YP_412124.1 1641545 D 323848 CDS YP_412125.1 82702559 3786628 1642763..1643779 1 NC_007614.1 glycosyl transferase family protein 1643779 3786628 Nmul_A1430 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_412125.1 1642763 D 323848 CDS YP_412126.1 82702560 3784624 1643921..1644208 1 NC_007614.1 transposase IS3/IS911 1644208 3784624 Nmul_A1431 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412126.1 1643921 D 323848 CDS YP_412127.1 82702561 3784625 1644205..1645047 1 NC_007614.1 integrase catalytic subunit 1645047 3784625 Nmul_A1432 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412127.1 1644205 D 323848 CDS YP_412128.1 82702562 3784626 complement(1645228..1646802) 1 NC_007614.1 hypothetical protein 1646802 3784626 Nmul_A1433 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412128.1 1645228 R 323848 CDS YP_412129.1 82702563 3784627 1646989..1648032 1 NC_007614.1 integrase catalytic subunit 1648032 3784627 Nmul_A1434 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412129.1 1646989 D 323848 CDS YP_412130.1 82702564 3784628 complement(1648110..1648841) 1 NC_007614.1 hypothetical protein 1648841 3784628 Nmul_A1435 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412130.1 1648110 R 323848 CDS YP_412131.1 82702565 3784629 complement(1648834..1649958) 1 NC_007614.1 hypothetical protein 1649958 3784629 Nmul_A1436 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412131.1 1648834 R 323848 CDS YP_412132.1 82702566 3784630 complement(1649951..1650565) 1 NC_007614.1 GCN5-like N-acetyltransferase 1650565 3784630 Nmul_A1437 Nitrosospira multiformis ATCC 25196 GCN5-like N-acetyltransferase YP_412132.1 1649951 R 323848 CDS YP_412133.1 82702567 3784631 complement(1650562..1652082) 1 NC_007614.1 hypothetical protein 1652082 3784631 Nmul_A1438 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412133.1 1650562 R 323848 CDS YP_412134.1 82702568 3784632 complement(1652092..1652526) 1 NC_007614.1 hypothetical protein 1652526 3784632 Nmul_A1439 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412134.1 1652092 R 323848 CDS YP_412135.1 82702569 3784633 complement(1652560..1652943) 1 NC_007614.1 hypothetical protein 1652943 3784633 Nmul_A1440 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412135.1 1652560 R 323848 CDS YP_412136.1 82702570 3784634 complement(1653126..1653398) 1 NC_007614.1 putative transposase 1653398 3784634 Nmul_A1441 Nitrosospira multiformis ATCC 25196 putative transposase YP_412136.1 1653126 R 323848 CDS YP_412137.1 82702571 3784635 complement(1653421..1653969) 1 NC_007614.1 putative transposase 1653969 3784635 Nmul_A1442 Nitrosospira multiformis ATCC 25196 putative transposase YP_412137.1 1653421 R 323848 CDS YP_412138.1 82702572 3784636 complement(1653951..1654229) 1 NC_007614.1 transposase IS3/IS911 1654229 3784636 Nmul_A1443 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412138.1 1653951 R 323848 CDS YP_412139.1 82702573 3784637 complement(1654339..1656375) 1 NC_007614.1 hypothetical protein 1656375 3784637 Nmul_A1444 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412139.1 1654339 R 323848 CDS YP_412140.1 82702574 3784638 complement(1656372..1656926) 1 NC_007614.1 glycoside hydrolase family protein 1656926 3784638 Nmul_A1445 Nitrosospira multiformis ATCC 25196 glycoside hydrolase family protein YP_412140.1 1656372 R 323848 CDS YP_412141.1 82702575 3784639 complement(1657268..1657645) 1 NC_007614.1 hypothetical protein 1657645 3784639 Nmul_A1446 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412141.1 1657268 R 323848 CDS YP_412142.1 82702576 3784640 complement(1657851..1658441) 1 NC_007614.1 hypothetical protein 1658441 3784640 Nmul_A1447 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412142.1 1657851 R 323848 CDS YP_412143.1 82702577 3784641 complement(1658432..1658782) 1 NC_007614.1 hypothetical protein 1658782 3784641 Nmul_A1448 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412143.1 1658432 R 323848 CDS YP_412144.1 82702578 3784642 complement(1658782..1659678) 1 NC_007614.1 hypothetical protein 1659678 3784642 Nmul_A1449 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412144.1 1658782 R 323848 CDS YP_412145.1 82702579 3785541 complement(1659682..1660299) 1 NC_007614.1 hypothetical protein 1660299 3785541 Nmul_A1450 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412145.1 1659682 R 323848 CDS YP_412146.1 82702580 3785542 complement(1660296..1660628) 1 NC_007614.1 hypothetical protein 1660628 3785542 Nmul_A1451 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412146.1 1660296 R 323848 CDS YP_412147.1 82702581 3785543 complement(1660628..1660996) 1 NC_007614.1 hypothetical protein 1660996 3785543 Nmul_A1452 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412147.1 1660628 R 323848 CDS YP_412148.1 82702582 3785544 complement(1661069..1661509) 1 NC_007614.1 hypothetical protein 1661509 3785544 Nmul_A1453 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412148.1 1661069 R 323848 CDS YP_412149.1 82702583 3785545 complement(1661588..1662859) 1 NC_007614.1 hypothetical protein 1662859 3785545 Nmul_A1454 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412149.1 1661588 R 323848 CDS YP_412150.1 82702584 3785546 complement(1662874..1663836) 1 NC_007614.1 hypothetical protein 1663836 3785546 Nmul_A1455 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412150.1 1662874 R 323848 CDS YP_412151.1 82702585 3785547 complement(1664034..1664771) 1 NC_007614.1 hypothetical protein 1664771 3785547 Nmul_A1456 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412151.1 1664034 R 323848 CDS YP_412152.1 82702586 3785548 complement(1664771..1665649) 1 NC_007614.1 hypothetical protein 1665649 3785548 Nmul_A1457 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412152.1 1664771 R 323848 CDS YP_412153.1 82702587 3785549 complement(1665729..1666466) 1 NC_007614.1 hypothetical protein 1666466 3785549 Nmul_A1458 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412153.1 1665729 R 323848 CDS YP_412154.1 82702588 3785550 complement(1666466..1667344) 1 NC_007614.1 hypothetical protein 1667344 3785550 Nmul_A1459 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412154.1 1666466 R 323848 CDS YP_412155.1 82702589 3785551 complement(1667844..1669415) 1 NC_007614.1 hypothetical protein 1669415 3785551 Nmul_A1460 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412155.1 1667844 R 323848 CDS YP_412156.1 82702590 3785552 complement(1669416..1669991) 1 NC_007614.1 hypothetical protein 1669991 3785552 Nmul_A1461 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412156.1 1669416 R 323848 CDS YP_412157.1 82702591 3785553 complement(1670005..1671990) 1 NC_007614.1 putative phage portal protein 1671990 3785553 Nmul_A1462 Nitrosospira multiformis ATCC 25196 putative phage portal protein YP_412157.1 1670005 R 323848 CDS YP_412158.1 82702592 3785554 complement(1671987..1673240) 1 NC_007614.1 Phage terminase, large subunit, PBSX 1673240 3785554 Nmul_A1463 Nitrosospira multiformis ATCC 25196 Phage terminase, large subunit, PBSX YP_412158.1 1671987 R 323848 CDS YP_412159.1 82702593 3785555 complement(1673258..1673830) 1 NC_007614.1 hypothetical protein 1673830 3785555 Nmul_A1464 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412159.1 1673258 R 323848 CDS YP_412160.1 82702594 3785556 complement(1674168..1674734) 1 NC_007614.1 hypothetical protein 1674734 3785556 Nmul_A1465 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412160.1 1674168 R 323848 CDS YP_412161.1 82702595 3785557 1675174..1676016 1 NC_007614.1 hypothetical protein 1676016 3785557 Nmul_A1466 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412161.1 1675174 D 323848 CDS YP_412162.1 82702596 3785558 complement(1676221..1677987) 1 NC_007614.1 catalyzes the formation of acetate from pyruvate; thiamine pyrophosphate protein 1677987 3785558 Nmul_A1467 Nitrosospira multiformis ATCC 25196 thiamine pyrophosphate protein YP_412162.1 1676221 R 323848 CDS YP_412163.1 82702597 3785559 complement(1678143..1678754) 1 NC_007614.1 hypothetical protein 1678754 3785559 Nmul_A1468 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412163.1 1678143 R 323848 CDS YP_412164.1 82702598 3785560 complement(1678809..1679258) 1 NC_007614.1 hypothetical protein 1679258 3785560 Nmul_A1469 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412164.1 1678809 R 323848 CDS YP_412165.1 82702599 3785444 complement(1679255..1679821) 1 NC_007614.1 NADPH-dependent FMN reductase 1679821 3785444 Nmul_A1470 Nitrosospira multiformis ATCC 25196 NADPH-dependent FMN reductase YP_412165.1 1679255 R 323848 CDS YP_412166.1 82702600 3785445 complement(1679989..1680855) 1 NC_007614.1 pirin-like protein 1680855 3785445 Nmul_A1471 Nitrosospira multiformis ATCC 25196 pirin-like protein YP_412166.1 1679989 R 323848 CDS YP_412167.1 82702601 3785446 1680966..1681871 1 NC_007614.1 LysR family transcriptional regulator 1681871 3785446 Nmul_A1472 Nitrosospira multiformis ATCC 25196 LysR family transcriptional regulator YP_412167.1 1680966 D 323848 CDS YP_412168.1 82702602 3785447 complement(1681942..1683048) 1 NC_007614.1 zinc-containing alcohol dehydrogenase superfamily protein 1683048 3785447 Nmul_A1473 Nitrosospira multiformis ATCC 25196 zinc-containing alcohol dehydrogenase superfamily protein YP_412168.1 1681942 R 323848 CDS YP_412169.1 82702603 3785448 1683244..1683870 1 NC_007614.1 hypothetical protein 1683870 3785448 Nmul_A1474 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412169.1 1683244 D 323848 CDS YP_412170.1 82702604 3785449 complement(1683961..1685505) 1 NC_007614.1 FAD linked oxidase-like protein 1685505 3785449 Nmul_A1475 Nitrosospira multiformis ATCC 25196 FAD linked oxidase-like protein YP_412170.1 1683961 R 323848 CDS YP_412171.1 82702605 3785450 complement(1685531..1686547) 1 NC_007614.1 hypothetical protein 1686547 3785450 Nmul_A1476 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412171.1 1685531 R 323848 CDS YP_412172.1 82702606 3785451 complement(1686576..1686902) 1 NC_007614.1 cytochrome c, class I 1686902 3785451 Nmul_A1477 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_412172.1 1686576 R 323848 CDS YP_412173.1 82702607 3785452 complement(1687227..1689179) 1 NC_007614.1 outer membrane autotransporter barrel protein 1689179 3785452 Nmul_A1478 Nitrosospira multiformis ATCC 25196 outer membrane autotransporter barrel protein YP_412173.1 1687227 R 323848 CDS YP_412174.1 82702608 3785453 complement(1689820..1690080) 1 NC_007614.1 hypothetical protein 1690080 3785453 Nmul_A1479 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412174.1 1689820 R 323848 CDS YP_412175.1 82702609 3785454 1690329..1690859 1 NC_007614.1 hypothetical protein 1690859 3785454 Nmul_A1480 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412175.1 1690329 D 323848 CDS YP_412176.1 82702610 3785455 complement(1691400..1691741) 1 NC_007614.1 hypothetical protein 1691741 3785455 Nmul_A1481 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412176.1 1691400 R 323848 CDS YP_412177.1 82702611 3785456 complement(1691952..1692557) 1 NC_007614.1 hypothetical protein 1692557 3785456 Nmul_A1482 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412177.1 1691952 R 323848 CDS YP_412178.1 82702612 3785457 1692769..1693032 1 NC_007614.1 transposase IS3/IS911 1693032 3785457 Nmul_A1483 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412178.1 1692769 D 323848 CDS YP_412179.1 82702613 3785458 1693059..1693889 1 NC_007614.1 integrase catalytic subunit 1693889 3785458 Nmul_A1484 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412179.1 1693059 D 323848 CDS YP_412180.1 82702614 3785459 complement(1694316..1694813) 1 NC_007614.1 PE-PGRS family protein 1694813 3785459 Nmul_A1485 Nitrosospira multiformis ATCC 25196 PE-PGRS family protein YP_412180.1 1694316 R 323848 CDS YP_412181.1 82702615 3785460 1695275..1695781 1 NC_007614.1 hemerythrin HHE cation binding protein 1695781 3785460 Nmul_A1486 Nitrosospira multiformis ATCC 25196 hemerythrin HHE cation binding protein YP_412181.1 1695275 D 323848 CDS YP_412182.1 82702616 3785461 complement(1696079..1697908) 1 NC_007614.1 ABC transporter-like protein 1697908 3785461 Nmul_A1487 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412182.1 1696079 R 323848 CDS YP_412183.1 82702617 3785462 complement(1699110..1699343) 1 NC_007614.1 hypothetical protein 1699343 3785462 Nmul_A1488 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412183.1 1699110 R 323848 CDS YP_412184.1 82702618 3785366 complement(1699601..1700491) 1 NC_007614.1 short chain dehydrogenase 1700491 3785366 Nmul_A1489 Nitrosospira multiformis ATCC 25196 short chain dehydrogenase YP_412184.1 1699601 R 323848 CDS YP_412185.1 82702619 3785367 complement(1700803..1703310) 1 NC_007614.1 PAS/PAC sensor hybrid histidine kinase 1703310 3785367 Nmul_A1490 Nitrosospira multiformis ATCC 25196 PAS/PAC sensor hybrid histidine kinase YP_412185.1 1700803 R 323848 CDS YP_412186.1 82702620 3785368 1703711..1705801 1 NC_007614.1 PAS/PAC sensor hybrid histidine kinase 1705801 3785368 Nmul_A1491 Nitrosospira multiformis ATCC 25196 PAS/PAC sensor hybrid histidine kinase YP_412186.1 1703711 D 323848 CDS YP_412187.1 82702621 3785369 1706112..1707932 1 NC_007614.1 PAS/PAC sensor hybrid histidine kinase 1707932 3785369 Nmul_A1492 Nitrosospira multiformis ATCC 25196 PAS/PAC sensor hybrid histidine kinase YP_412187.1 1706112 D 323848 CDS YP_412188.1 82702622 3785370 1708371..1709372 1 NC_007614.1 hypothetical protein 1709372 3785370 Nmul_A1493 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412188.1 1708371 D 323848 CDS YP_412189.1 82702623 3785371 1709582..1710472 1 NC_007614.1 esterase/lipase/thioesterase family protein 1710472 3785371 Nmul_A1494 Nitrosospira multiformis ATCC 25196 esterase/lipase/thioesterase family protein YP_412189.1 1709582 D 323848 CDS YP_412190.1 82702624 3785372 complement(1710598..1711638) 1 NC_007614.1 Fatty acid desaturase 1711638 3785372 Nmul_A1495 Nitrosospira multiformis ATCC 25196 Fatty acid desaturase YP_412190.1 1710598 R 323848 CDS YP_412191.1 82702625 3785373 1711821..1712219 1 NC_007614.1 hypothetical protein 1712219 3785373 Nmul_A1496 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412191.1 1711821 D 323848 CDS YP_412192.1 82702626 3785374 complement(1712233..1713522) 1 NC_007614.1 O-acetylhomoserine/O-acetylserine sulfhydrylase 1713522 3785374 Nmul_A1497 Nitrosospira multiformis ATCC 25196 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_412192.1 1712233 R 323848 CDS YP_412193.1 82702627 3785375 1713591..1714016 1 NC_007614.1 hypothetical protein 1714016 3785375 Nmul_A1498 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412193.1 1713591 D 323848 CDS YP_412194.1 82702628 3785376 1714199..1715698 1 NC_007614.1 FAD dependent oxidoreductase 1715698 3785376 Nmul_A1499 Nitrosospira multiformis ATCC 25196 FAD dependent oxidoreductase YP_412194.1 1714199 D 323848 CDS YP_412195.1 82702629 3785377 complement(1715880..1716593) 1 NC_007614.1 hypothetical protein 1716593 3785377 Nmul_A1500 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412195.1 1715880 R 323848 CDS YP_412196.1 82702630 3785378 1716741..1717823 1 NC_007614.1 diguanylate cyclase 1717823 3785378 Nmul_A1501 Nitrosospira multiformis ATCC 25196 diguanylate cyclase YP_412196.1 1716741 D 323848 CDS YP_412197.1 82702631 3785379 complement(1717994..1719505) 1 NC_007614.1 RND efflux system outer membrane lipoprotein NodT 1719505 3785379 Nmul_A1502 Nitrosospira multiformis ATCC 25196 RND efflux system outer membrane lipoprotein NodT YP_412197.1 1717994 R 323848 CDS YP_412198.1 82702632 3785380 complement(1719532..1720719) 1 NC_007614.1 secretion protein HlyD 1720719 3785380 Nmul_A1503 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_412198.1 1719532 R 323848 CDS YP_412199.1 82702633 3785381 complement(1720716..1721411) 1 NC_007614.1 ABC transporter-like protein 1721411 3785381 Nmul_A1504 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412199.1 1720716 R 323848 CDS YP_412200.1 82702634 3785382 complement(1721484..1722620) 1 NC_007614.1 hypothetical protein 1722620 3785382 Nmul_A1505 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412200.1 1721484 R 323848 CDS YP_412201.1 82702635 3785383 complement(1722899..1723222) 1 NC_007614.1 pyruvate kinase 1723222 3785383 Nmul_A1506 Nitrosospira multiformis ATCC 25196 pyruvate kinase YP_412201.1 1722899 R 323848 CDS YP_412202.1 82702636 3785384 complement(1723300..1724406) 1 NC_007614.1 pyruvate kinase 1724406 3785384 Nmul_A1507 Nitrosospira multiformis ATCC 25196 pyruvate kinase YP_412202.1 1723300 R 323848 CDS YP_412203.1 82702637 3785385 complement(1724444..1724929) 1 NC_007614.1 MgtC/SapB transporter 1724929 3785385 Nmul_A1508 Nitrosospira multiformis ATCC 25196 MgtC/SapB transporter YP_412203.1 1724444 R 323848 CDS YP_412204.1 82702638 3786095 complement(1724956..1726155) 1 NC_007614.1 hypothetical protein 1726155 3786095 Nmul_A1509 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412204.1 1724956 R 323848 CDS YP_412205.1 82702639 3786096 complement(1726369..1728066) 1 NC_007614.1 hypothetical protein 1728066 3786096 Nmul_A1510 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412205.1 1726369 R 323848 CDS YP_412206.1 82702640 3786097 1728258..1729556 1 NC_007614.1 hypothetical protein 1729556 3786097 Nmul_A1511 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412206.1 1728258 D 323848 CDS YP_412207.1 82702641 3786098 complement(1729558..1730085) 1 NC_007614.1 hypothetical protein 1730085 3786098 Nmul_A1512 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412207.1 1729558 R 323848 CDS YP_412208.1 82702642 3786099 complement(1730154..1730576) 1 NC_007614.1 hypothetical protein 1730576 3786099 Nmul_A1513 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412208.1 1730154 R 323848 CDS YP_412209.1 82702643 3786100 complement(1730808..1733318) 1 NC_007614.1 mechanosensitive ion channel MscS 1733318 3786100 Nmul_A1514 Nitrosospira multiformis ATCC 25196 mechanosensitive ion channel MscS YP_412209.1 1730808 R 323848 CDS YP_412210.1 82702644 3786101 complement(1733515..1735914) 1 NC_007614.1 catalase 1735914 3786101 Nmul_A1515 Nitrosospira multiformis ATCC 25196 catalase YP_412210.1 1733515 R 323848 CDS YP_412211.1 82702645 3786102 1736155..1737135 1 NC_007614.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1737135 3786102 Nmul_A1516 Nitrosospira multiformis ATCC 25196 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_412211.1 1736155 D 323848 CDS YP_412212.1 82702646 3786103 complement(1737214..1737699) 1 NC_007614.1 hypothetical protein 1737699 3786103 Nmul_A1517 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412212.1 1737214 R 323848 CDS YP_412213.1 82702647 3786104 complement(1737804..1738151) 1 NC_007614.1 hypothetical protein 1738151 3786104 Nmul_A1518 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412213.1 1737804 R 323848 CDS YP_412214.1 82702648 3786105 1738507..1739091 1 NC_007614.1 hypothetical protein 1739091 3786105 Nmul_A1519 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412214.1 1738507 D 323848 CDS YP_412215.1 82702649 3786106 1739314..1740297 1 NC_007614.1 heat shock protein DnaJ-like protein 1740297 3786106 Nmul_A1520 Nitrosospira multiformis ATCC 25196 heat shock protein DnaJ-like protein YP_412215.1 1739314 D 323848 CDS YP_412216.1 82702650 3786107 1740294..1740650 1 NC_007614.1 hypothetical protein 1740650 3786107 Nmul_A1521 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412216.1 1740294 D 323848 CDS YP_412217.1 82702651 3786108 1740957..1741427 1 NC_007614.1 hypothetical protein 1741427 3786108 Nmul_A1522 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412217.1 1740957 D 323848 CDS YP_412218.1 82702652 3786109 1741393..1743546 1 NC_007614.1 phospholipase D/transphosphatidylase 1743546 3786109 Nmul_A1523 Nitrosospira multiformis ATCC 25196 phospholipase D/transphosphatidylase YP_412218.1 1741393 D 323848 CDS YP_412219.1 82702653 3786110 1743629..1744315 1 NC_007614.1 endonuclease/exonuclease/phosphatase 1744315 3786110 Nmul_A1524 Nitrosospira multiformis ATCC 25196 endonuclease/exonuclease/phosphatase YP_412219.1 1743629 D 323848 CDS YP_412220.1 82702654 3786111 complement(1744742..1745089) 1 NC_007614.1 transposase IS4 1745089 3786111 Nmul_A1525 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_412220.1 1744742 R 323848 CDS YP_412221.1 82702655 3786112 complement(1745131..1745499) 1 NC_007614.1 transposase 1745499 3786112 Nmul_A1526 Nitrosospira multiformis ATCC 25196 transposase YP_412221.1 1745131 R 323848 CDS YP_412222.1 82702656 3786113 1745859..1746404 1 NC_007614.1 cyclase/dehydrase 1746404 3786113 Nmul_A1527 Nitrosospira multiformis ATCC 25196 cyclase/dehydrase YP_412222.1 1745859 D 323848 CDS YP_412223.1 82702657 3785601 1746817..1749714 1 NC_007614.1 E1-E2 type ATPase 1749714 3785601 Nmul_A1528 Nitrosospira multiformis ATCC 25196 E1-E2 type ATPase YP_412223.1 1746817 D 323848 CDS YP_412224.1 82702658 3785602 complement(1749793..1750077) 1 NC_007614.1 hypothetical protein 1750077 3785602 Nmul_A1529 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412224.1 1749793 R 323848 CDS YP_412225.1 82702659 3785603 complement(1750490..1751014) 1 NC_007614.1 hypothetical protein 1751014 3785603 Nmul_A1530 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412225.1 1750490 R 323848 CDS YP_412226.1 82702660 3785604 1751511..1752080 1 NC_007614.1 XRE family transcriptional regulator 1752080 3785604 Nmul_A1531 Nitrosospira multiformis ATCC 25196 XRE family transcriptional regulator YP_412226.1 1751511 D 323848 CDS YP_412227.1 82702661 3785605 1752238..1752513 1 NC_007614.1 hypothetical protein 1752513 3785605 Nmul_A1532 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412227.1 1752238 D 323848 CDS YP_412228.1 82702662 3785606 1752600..1752926 1 NC_007614.1 hypothetical protein 1752926 3785606 Nmul_A1533 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412228.1 1752600 D 323848 CDS YP_412229.1 82702663 3785607 1753284..1753541 1 NC_007614.1 hypothetical protein 1753541 3785607 Nmul_A1534 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412229.1 1753284 D 323848 CDS YP_412230.1 82702664 3785608 1753640..1754836 1 NC_007614.1 hypothetical protein 1754836 3785608 Nmul_A1535 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412230.1 1753640 D 323848 CDS YP_412231.1 82702665 3785609 1754892..1755251 1 NC_007614.1 hypothetical protein 1755251 3785609 Nmul_A1536 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412231.1 1754892 D 323848 CDS YP_412232.1 82702666 3785610 1755374..1757248 1 NC_007614.1 Na+/H+ antiporter NhaA 1757248 3785610 Nmul_A1537 Nitrosospira multiformis ATCC 25196 Na+/H+ antiporter NhaA YP_412232.1 1755374 D 323848 CDS YP_412233.1 82702667 3785611 1757411..1757839 1 NC_007614.1 OsmC-like protein 1757839 3785611 Nmul_A1538 Nitrosospira multiformis ATCC 25196 OsmC-like protein YP_412233.1 1757411 D 323848 CDS YP_412234.1 82702668 3785612 complement(1758106..1759230) 1 NC_007614.1 NlpBDapX lipoprotein 1759230 3785612 Nmul_A1539 Nitrosospira multiformis ATCC 25196 NlpBDapX lipoprotein YP_412234.1 1758106 R 323848 CDS YP_412235.1 82702669 3785613 complement(1759287..1760189) 1 NC_007614.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1760189 3785613 Nmul_A1540 Nitrosospira multiformis ATCC 25196 dihydrodipicolinate synthase YP_412235.1 1759287 R 323848 CDS YP_412236.1 82702670 3785614 complement(1760428..1763037) 1 NC_007614.1 ATPase with chaperone activity 1763037 3785614 Nmul_A1541 Nitrosospira multiformis ATCC 25196 ATPase with chaperone activity YP_412236.1 1760428 R 323848 CDS YP_412237.1 82702671 3785615 complement(1763177..1764658) 1 NC_007614.1 ferredoxin-dependent glutamate synthase 1764658 3785615 Nmul_A1542 Nitrosospira multiformis ATCC 25196 ferredoxin-dependent glutamate synthase YP_412237.1 1763177 R 323848 CDS YP_412238.1 82702672 3785616 1764718..1765587 1 NC_007614.1 nicotinate-nucleotide pyrophosphorylase 1765587 3785616 Nmul_A1543 Nitrosospira multiformis ATCC 25196 nicotinate-nucleotide pyrophosphorylase YP_412238.1 1764718 D 323848 CDS YP_412239.1 82702673 3785617 complement(1765715..1766878) 1 NC_007614.1 acyltransferase 3 1766878 3785617 Nmul_A1544 Nitrosospira multiformis ATCC 25196 acyltransferase 3 YP_412239.1 1765715 R 323848 CDS YP_412240.1 82702674 3785618 complement(1767082..1767987) 1 NC_007614.1 hypothetical protein 1767987 3785618 Nmul_A1545 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412240.1 1767082 R 323848 CDS YP_412241.1 82702675 3785619 complement(1768095..1771760) 1 NC_007614.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1771760 3785619 Nmul_A1546 Nitrosospira multiformis ATCC 25196 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_412241.1 1768095 R 323848 CDS YP_412242.1 82702676 3785620 1772317..1773525 1 NC_007614.1 Sodium/hydrogen exchanger 1773525 3785620 Nmul_A1547 Nitrosospira multiformis ATCC 25196 Sodium/hydrogen exchanger YP_412242.1 1772317 D 323848 CDS YP_412243.1 82702677 3785270 1773522..1774637 1 NC_007614.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase 1774637 3785270 Nmul_A1548 Nitrosospira multiformis ATCC 25196 carboxylate-amine ligase YP_412243.1 1773522 D 323848 CDS YP_412244.1 82702678 3785271 1774843..1775619 1 NC_007614.1 peptidase C26 1775619 3785271 Nmul_A1549 Nitrosospira multiformis ATCC 25196 peptidase C26 YP_412244.1 1774843 D 323848 CDS YP_412245.1 82702679 3785272 complement(1775740..1777173) 1 NC_007614.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1777173 3785272 Nmul_A1550 Nitrosospira multiformis ATCC 25196 threonine synthase YP_412245.1 1775740 R 323848 CDS YP_412246.2 229137830 3785273 complement(1777319..1778638) 1 NC_007614.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1778638 3785273 Nmul_A1551 Nitrosospira multiformis ATCC 25196 homoserine dehydrogenase YP_412246.2 1777319 R 323848 CDS YP_412247.1 82702681 3785274 complement(1778738..1779967) 1 NC_007614.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 1779967 3785274 Nmul_A1552 Nitrosospira multiformis ATCC 25196 aminotransferase AlaT YP_412247.1 1778738 R 323848 CDS YP_412248.1 82702682 3785275 1780184..1780564 1 NC_007614.1 hypothetical protein 1780564 3785275 Nmul_A1553 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412248.1 1780184 D 323848 CDS YP_412249.1 82702683 3785276 1780594..1780965 1 NC_007614.1 glyoxalase/bleomycin resistance protein/dioxygenase 1780965 3785276 Nmul_A1554 Nitrosospira multiformis ATCC 25196 glyoxalase/bleomycin resistance protein/dioxygenase YP_412249.1 1780594 D 323848 CDS YP_412250.1 82702684 3785277 complement(1781194..1782432) 1 NC_007614.1 response regulator receiver/diguanylate phosphodiesterase 1782432 3785277 Nmul_A1555 Nitrosospira multiformis ATCC 25196 response regulator receiver/diguanylate phosphodiesterase YP_412250.1 1781194 R 323848 CDS YP_412251.1 82702685 3785278 complement(1782516..1786709) 1 NC_007614.1 multi-sensor hybrid histidine kinase 1786709 3785278 Nmul_A1556 Nitrosospira multiformis ATCC 25196 multi-sensor hybrid histidine kinase YP_412251.1 1782516 R 323848 CDS YP_412252.1 82702686 3785279 complement(1786714..1788039) 1 NC_007614.1 ABC transporter, periplasmic binding protein 1788039 3785279 Nmul_A1557 Nitrosospira multiformis ATCC 25196 ABC transporter, periplasmic binding protein YP_412252.1 1786714 R 323848 CDS YP_412253.1 82702687 3785280 complement(1788374..1789318) 1 NC_007614.1 histone deacetylase superfamily protein 1789318 3785280 Nmul_A1558 Nitrosospira multiformis ATCC 25196 histone deacetylase superfamily protein YP_412253.1 1788374 R 323848 CDS YP_412254.1 82702688 3785281 1789508..1791619 1 NC_007614.1 diguanylate cyclase/phosphodiesterase 1791619 3785281 Nmul_A1559 Nitrosospira multiformis ATCC 25196 diguanylate cyclase/phosphodiesterase YP_412254.1 1789508 D 323848 CDS YP_412255.1 82702689 3785282 1791861..1794005 1 NC_007614.1 hypothetical protein 1794005 3785282 Nmul_A1560 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412255.1 1791861 D 323848 CDS YP_412256.1 82702690 3785283 1794083..1795105 1 NC_007614.1 fructose-bisphosphate aldolase 1795105 3785283 Nmul_A1561 Nitrosospira multiformis ATCC 25196 fructose-bisphosphate aldolase YP_412256.1 1794083 D 323848 CDS YP_412257.1 82702691 3785284 1795128..1795514 1 NC_007614.1 crcB protein 1795514 3785284 Nmul_A1562 Nitrosospira multiformis ATCC 25196 crcB protein YP_412257.1 1795128 D 323848 CDS YP_412258.1 82702692 3785285 1795580..1795897 1 NC_007614.1 hypothetical protein 1795897 3785285 Nmul_A1563 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412258.1 1795580 D 323848 CDS YP_412259.1 82702693 3785286 1796880..1800263 1 NC_007614.1 hypothetical protein 1800263 3785286 Nmul_A1564 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412259.1 1796880 D 323848 CDS YP_412260.1 82702694 3785287 complement(1800218..1800499) 1 NC_007614.1 hypothetical protein 1800499 3785287 Nmul_A1565 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412260.1 1800218 R 323848 CDS YP_412261.1 82702695 3785288 complement(1800933..1804292) 1 NC_007614.1 outer membrane autotransporter barrel protein 1804292 3785288 Nmul_A1566 Nitrosospira multiformis ATCC 25196 outer membrane autotransporter barrel protein YP_412261.1 1800933 R 323848 CDS YP_412262.1 82702696 3784449 complement(1805401..1805673) 1 NC_007614.1 putative transposase 1805673 3784449 Nmul_A1569 Nitrosospira multiformis ATCC 25196 putative transposase YP_412262.1 1805401 R 323848 CDS YP_412263.1 82702697 3784450 complement(1805696..1806244) 1 NC_007614.1 putative transposase 1806244 3784450 Nmul_A1570 Nitrosospira multiformis ATCC 25196 putative transposase YP_412263.1 1805696 R 323848 CDS YP_412264.1 82702698 3784451 complement(1806226..1806504) 1 NC_007614.1 transposase IS3/IS911 1806504 3784451 Nmul_A1571 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412264.1 1806226 R 323848 CDS YP_412265.1 82702699 3784452 complement(1806696..1807208) 1 NC_007614.1 hypothetical protein 1807208 3784452 Nmul_A1572 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412265.1 1806696 R 323848 CDS YP_412266.1 82702700 3784453 complement(1807195..1807788) 1 NC_007614.1 polysaccharide deacetylase 1807788 3784453 Nmul_A1573 Nitrosospira multiformis ATCC 25196 polysaccharide deacetylase YP_412266.1 1807195 R 323848 CDS YP_412267.1 82702701 3784454 1808029..1808583 1 NC_007614.1 NADPH-dependent FMN reductase 1808583 3784454 Nmul_A1574 Nitrosospira multiformis ATCC 25196 NADPH-dependent FMN reductase YP_412267.1 1808029 D 323848 CDS YP_412268.1 82702702 3784455 complement(1808631..1809641) 1 NC_007614.1 zinc-containing alcohol dehydrogenase superfamily protein 1809641 3784455 Nmul_A1575 Nitrosospira multiformis ATCC 25196 zinc-containing alcohol dehydrogenase superfamily protein YP_412268.1 1808631 R 323848 CDS YP_412269.1 82702703 3784456 1809823..1810134 1 NC_007614.1 hypothetical protein 1810134 3784456 Nmul_A1576 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412269.1 1809823 D 323848 CDS YP_412270.1 82702704 3784457 1810453..1810914 1 NC_007614.1 hypothetical protein 1810914 3784457 Nmul_A1577 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412270.1 1810453 D 323848 CDS YP_412271.1 82702705 3784458 complement(1810992..1812395) 1 NC_007614.1 hypothetical protein 1812395 3784458 Nmul_A1578 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412271.1 1810992 R 323848 CDS YP_412272.1 82702706 3784459 1812743..1813087 1 NC_007614.1 hypothetical protein 1813087 3784459 Nmul_A1579 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412272.1 1812743 D 323848 CDS YP_412273.1 82702707 3784460 1813096..1813506 1 NC_007614.1 hypothetical protein 1813506 3784460 Nmul_A1580 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412273.1 1813096 D 323848 CDS YP_412274.1 82702708 3784461 complement(1813569..1814027) 1 NC_007614.1 hypothetical protein 1814027 3784461 Nmul_A1581 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412274.1 1813569 R 323848 CDS YP_412275.1 82702709 3784462 1814172..1815302 1 NC_007614.1 alpha/beta hydrolase fold protein 1815302 3784462 Nmul_A1582 Nitrosospira multiformis ATCC 25196 alpha/beta hydrolase fold protein YP_412275.1 1814172 D 323848 CDS YP_412276.1 82702710 3784463 1815459..1816547 1 NC_007614.1 hypothetical protein 1816547 3784463 Nmul_A1583 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412276.1 1815459 D 323848 CDS YP_412277.1 82702711 3784464 1816780..1817211 1 NC_007614.1 hypothetical protein 1817211 3784464 Nmul_A1584 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412277.1 1816780 D 323848 CDS YP_412278.1 82702712 3784465 complement(1817278..1819650) 1 NC_007614.1 RNA binding S1 1819650 3784465 Nmul_A1585 Nitrosospira multiformis ATCC 25196 RNA binding S1 YP_412278.1 1817278 R 323848 CDS YP_412279.1 82702713 3784466 complement(1819731..1820081) 1 NC_007614.1 Na+/H+ antiporter subunit 1820081 3784466 Nmul_A1586 Nitrosospira multiformis ATCC 25196 Na+/H+ antiporter subunit YP_412279.1 1819731 R 323848 CDS YP_412280.1 82702714 3784182 complement(1820078..1820359) 1 NC_007614.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit F 1820359 3784182 Nmul_A1587 Nitrosospira multiformis ATCC 25196 putative monovalent cation/H+ antiporter subunit F YP_412280.1 1820078 R 323848 CDS YP_412281.1 82702715 3784183 complement(1820356..1820844) 1 NC_007614.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 1820844 3784183 Nmul_A1588 Nitrosospira multiformis ATCC 25196 putative monovalent cation/H+ antiporter subunit E YP_412281.1 1820356 R 323848 CDS YP_412282.1 82702716 3784184 complement(1820841..1822505) 1 NC_007614.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 1822505 3784184 Nmul_A1589 Nitrosospira multiformis ATCC 25196 putative monovalent cation/H+ antiporter subunit D YP_412282.1 1820841 R 323848 CDS YP_412283.1 82702717 3784185 complement(1822502..1822843) 1 NC_007614.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 1822843 3784185 Nmul_A1590 Nitrosospira multiformis ATCC 25196 putative monovalent cation/H+ antiporter subunit C YP_412283.1 1822502 R 323848 CDS YP_412284.1 82702718 3784186 complement(1822843..1825917) 1 NC_007614.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 1825917 3784186 Nmul_A1591 Nitrosospira multiformis ATCC 25196 putative monovalent cation/H+ antiporter subunit A YP_412284.1 1822843 R 323848 CDS YP_412285.1 82702719 3784187 complement(1826307..1826822) 1 NC_007614.1 NLP/P60 1826822 3784187 Nmul_A1592 Nitrosospira multiformis ATCC 25196 NLP/P60 YP_412285.1 1826307 R 323848 CDS YP_412286.1 82702720 3784188 complement(1827034..1827411) 1 NC_007614.1 glyoxalase/bleomycin resistance protein/dioxygenase 1827411 3784188 Nmul_A1593 Nitrosospira multiformis ATCC 25196 glyoxalase/bleomycin resistance protein/dioxygenase YP_412286.1 1827034 R 323848 CDS YP_412287.1 82702721 3784189 complement(1827509..1828852) 1 NC_007614.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 1828852 3784189 Nmul_A1594 Nitrosospira multiformis ATCC 25196 succinylarginine dihydrolase YP_412287.1 1827509 R 323848 CDS YP_412288.1 82702722 3784190 complement(1828900..1829313) 1 NC_007614.1 hypothetical protein 1829313 3784190 Nmul_A1595 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412288.1 1828900 R 323848 CDS YP_412289.1 82702723 3784191 1829489..1830250 1 NC_007614.1 hypothetical protein 1830250 3784191 Nmul_A1596 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412289.1 1829489 D 323848 CDS YP_412290.1 82702724 3784192 complement(1830517..1831095) 1 NC_007614.1 hypothetical protein 1831095 3784192 Nmul_A1597 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412290.1 1830517 R 323848 CDS YP_412291.1 82702725 3784193 complement(1831254..1833029) 1 NC_007614.1 hypothetical protein 1833029 3784193 Nmul_A1598 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412291.1 1831254 R 323848 CDS YP_412292.1 82702726 3784194 complement(1833075..1833755) 1 NC_007614.1 HNH nuclease 1833755 3784194 Nmul_A1599 Nitrosospira multiformis ATCC 25196 HNH nuclease YP_412292.1 1833075 R 323848 CDS YP_412293.1 82702727 3784195 1833942..1834436 1 NC_007614.1 hypothetical protein 1834436 3784195 Nmul_A1600 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412293.1 1833942 D 323848 CDS YP_412294.1 82702728 3784196 complement(1834649..1835062) 1 NC_007614.1 chain A, red copper protein nitrosocyanin 1835062 3784196 Nmul_A1601 Nitrosospira multiformis ATCC 25196 chain A, red copper protein nitrosocyanin YP_412294.1 1834649 R 323848 CDS YP_412295.1 82702729 3784197 complement(1836000..1836185) 1 NC_007614.1 CsbD-like protein 1836185 3784197 Nmul_A1602 Nitrosospira multiformis ATCC 25196 CsbD-like protein YP_412295.1 1836000 R 323848 CDS YP_412296.1 82702730 3784198 complement(1836661..1836987) 1 NC_007614.1 hypothetical protein 1836987 3784198 Nmul_A1603 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412296.1 1836661 R 323848 CDS YP_412297.1 82702731 3784835 complement(1838484..1839881) 1 NC_007614.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1839881 gltX 3784835 gltX Nitrosospira multiformis ATCC 25196 glutamyl-tRNA synthetase YP_412297.1 1838484 R 323848 CDS YP_412298.1 82702732 3784837 complement(1840420..1842486) 1 NC_007614.1 diguanylate cyclase/phosphodiesterase 1842486 3784837 Nmul_A1605 Nitrosospira multiformis ATCC 25196 diguanylate cyclase/phosphodiesterase YP_412298.1 1840420 R 323848 CDS YP_412299.1 82702733 3784838 1843655..1844431 1 NC_007614.1 YcgR 1844431 3784838 Nmul_A1606 Nitrosospira multiformis ATCC 25196 YcgR YP_412299.1 1843655 D 323848 CDS YP_412300.1 82702734 3784839 1844740..1846803 1 NC_007614.1 multicopper oxidase, type 2 1846803 3784839 Nmul_A1607 Nitrosospira multiformis ATCC 25196 multicopper oxidase, type 2 YP_412300.1 1844740 D 323848 CDS YP_412301.1 82702735 3784840 1846947..1847834 1 NC_007614.1 cytochrome c, class I 1847834 3784840 Nmul_A1608 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_412301.1 1846947 D 323848 CDS YP_412302.1 82702736 3784841 complement(1847971..1848633) 1 NC_007614.1 hypothetical protein 1848633 3784841 Nmul_A1609 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412302.1 1847971 R 323848 CDS YP_412303.1 82702737 3784842 complement(1848630..1849571) 1 NC_007614.1 hypothetical protein 1849571 3784842 Nmul_A1610 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412303.1 1848630 R 323848 CDS YP_412304.1 82702738 3784843 complement(1849575..1850462) 1 NC_007614.1 ABC transporter-like protein 1850462 3784843 Nmul_A1611 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412304.1 1849575 R 323848 CDS YP_412305.1 82702739 3784844 complement(1850456..1851610) 1 NC_007614.1 hypothetical protein 1851610 3784844 Nmul_A1612 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412305.1 1850456 R 323848 CDS YP_412306.1 82702740 3784845 complement(1851934..1854498) 1 NC_007614.1 pyruvate, water dikinase 1854498 3784845 Nmul_A1613 Nitrosospira multiformis ATCC 25196 pyruvate, water dikinase YP_412306.1 1851934 R 323848 CDS YP_412307.1 82702741 3784846 complement(1854844..1855335) 1 NC_007614.1 hypothetical protein 1855335 3784846 Nmul_A1614 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412307.1 1854844 R 323848 CDS YP_412308.1 82702742 3784847 1855513..1856328 1 NC_007614.1 Ion transport protein 1856328 3784847 Nmul_A1615 Nitrosospira multiformis ATCC 25196 Ion transport protein YP_412308.1 1855513 D 323848 CDS YP_412309.1 82702743 3784848 1856416..1856805 1 NC_007614.1 hypothetical protein 1856805 3784848 Nmul_A1616 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412309.1 1856416 D 323848 CDS YP_412310.1 82702744 3784849 1856881..1858128 1 NC_007614.1 radical SAM family protein 1858128 3784849 Nmul_A1617 Nitrosospira multiformis ATCC 25196 radical SAM family protein YP_412310.1 1856881 D 323848 CDS YP_412311.1 82702745 3784850 complement(1858296..1859000) 1 NC_007614.1 DNA polymerase III subunit epsilon 1859000 3784850 Nmul_A1618 Nitrosospira multiformis ATCC 25196 DNA polymerase III subunit epsilon YP_412311.1 1858296 R 323848 CDS YP_412312.1 82702746 3784851 complement(1859121..1859588) 1 NC_007614.1 ribonuclease H 1859588 3784851 Nmul_A1619 Nitrosospira multiformis ATCC 25196 ribonuclease H YP_412312.1 1859121 R 323848 CDS YP_412313.1 82702747 3784088 complement(1859585..1860364) 1 NC_007614.1 generic methyl-transferase 1860364 3784088 Nmul_A1620 Nitrosospira multiformis ATCC 25196 generic methyl-transferase YP_412313.1 1859585 R 323848 CDS YP_412314.1 82702748 3784089 1860527..1861321 1 NC_007614.1 hydroxyacylglutathione hydrolase 1861321 3784089 Nmul_A1621 Nitrosospira multiformis ATCC 25196 hydroxyacylglutathione hydrolase YP_412314.1 1860527 D 323848 CDS YP_412315.1 82702749 3784090 1861572..1862705 1 NC_007614.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase 1862705 3784090 Nmul_A1622 Nitrosospira multiformis ATCC 25196 transaldolase YP_412315.1 1861572 D 323848 CDS YP_412316.1 82702750 3784091 1862756..1863661 1 NC_007614.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase-like protein 1863661 3784091 Nmul_A1623 Nitrosospira multiformis ATCC 25196 6-phosphogluconate dehydrogenase-like protein YP_412316.1 1862756 D 323848 CDS YP_412317.1 82702751 3784093 1864479..1864913 1 NC_007614.1 hypothetical protein 1864913 3784093 Nmul_A1625 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412317.1 1864479 D 323848 CDS YP_412318.1 82702752 3784094 1865883..1866359 1 NC_007614.1 hypothetical protein 1866359 3784094 Nmul_A1626 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412318.1 1865883 D 323848 CDS YP_412319.1 82702753 3784095 1866761..1867165 1 NC_007614.1 DoxX 1867165 3784095 Nmul_A1627 Nitrosospira multiformis ATCC 25196 DoxX YP_412319.1 1866761 D 323848 CDS YP_412320.1 82702754 3784096 1867229..1867942 1 NC_007614.1 6-phosphogluconolactonase 1867942 3784096 Nmul_A1628 Nitrosospira multiformis ATCC 25196 6-phosphogluconolactonase YP_412320.1 1867229 D 323848 CDS YP_412321.1 82702755 3784097 complement(1868002..1868643) 1 NC_007614.1 putative transcriptional regulator 1868643 3784097 Nmul_A1629 Nitrosospira multiformis ATCC 25196 putative transcriptional regulator YP_412321.1 1868002 R 323848 CDS YP_412322.1 82702756 3784098 1868955..1869383 1 NC_007614.1 hypothetical protein 1869383 3784098 Nmul_A1630 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412322.1 1868955 D 323848 CDS YP_412323.1 82702757 3784099 complement(1869622..1869885) 1 NC_007614.1 hypothetical protein 1869885 3784099 Nmul_A1631 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412323.1 1869622 R 323848 CDS YP_412324.1 82702758 3784100 complement(1869928..1870182) 1 NC_007614.1 hypothetical protein 1870182 3784100 Nmul_A1632 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412324.1 1869928 R 323848 CDS YP_412325.1 82702759 3784101 complement(1870266..1871288) 1 NC_007614.1 bile acid:sodium symporter 1871288 3784101 Nmul_A1633 Nitrosospira multiformis ATCC 25196 bile acid:sodium symporter YP_412325.1 1870266 R 323848 CDS YP_412326.1 82702760 3784102 complement(1871285..1871989) 1 NC_007614.1 hypothetical protein 1871989 3784102 Nmul_A1634 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412326.1 1871285 R 323848 CDS YP_412327.1 82702761 3784103 1872359..1873108 1 NC_007614.1 hypothetical protein 1873108 3784103 Nmul_A1635 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412327.1 1872359 D 323848 CDS YP_412328.1 82702762 3784104 complement(1873183..1873413) 1 NC_007614.1 histidine kinase A-like 1873413 3784104 Nmul_A1636 Nitrosospira multiformis ATCC 25196 histidine kinase A-like YP_412328.1 1873183 R 323848 CDS YP_412329.1 82702763 3784105 complement(1873695..1874003) 1 NC_007614.1 hypothetical protein 1874003 3784105 Nmul_A1637 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412329.1 1873695 R 323848 CDS YP_412330.1 82702764 3784106 complement(1874670..1875008) 1 NC_007614.1 nitrogen regulatory protein P-II (GlnB, GlnK) 1875008 3784106 Nmul_A1638 Nitrosospira multiformis ATCC 25196 nitrogen regulatory protein P-II (GlnB, GlnK) YP_412330.1 1874670 R 323848 CDS YP_412331.1 82702765 3785581 complement(1875027..1878086) 1 NC_007614.1 heavy metal efflux pump CzcA 1878086 3785581 Nmul_A1639 Nitrosospira multiformis ATCC 25196 heavy metal efflux pump CzcA YP_412331.1 1875027 R 323848 CDS YP_412332.1 82702766 3785582 complement(1878083..1879237) 1 NC_007614.1 secretion protein HlyD 1879237 3785582 Nmul_A1640 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_412332.1 1878083 R 323848 CDS YP_412333.1 82702767 3785583 complement(1879350..1880789) 1 NC_007614.1 Outer membrane efflux protein 1880789 3785583 Nmul_A1641 Nitrosospira multiformis ATCC 25196 Outer membrane efflux protein YP_412333.1 1879350 R 323848 CDS YP_412334.1 82702768 3785584 1881789..1882157 1 NC_007614.1 transposase 1882157 3785584 Nmul_A1642 Nitrosospira multiformis ATCC 25196 transposase YP_412334.1 1881789 D 323848 CDS YP_412335.1 82702769 3785585 1882199..1882546 1 NC_007614.1 transposase IS4 1882546 3785585 Nmul_A1643 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_412335.1 1882199 D 323848 CDS YP_412336.1 82702770 3785587 complement(1883103..1883450) 1 NC_007614.1 transposase IS4 1883450 3785587 Nmul_A1645 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_412336.1 1883103 R 323848 CDS YP_412337.1 82702771 3785588 complement(1883492..1883860) 1 NC_007614.1 transposase 1883860 3785588 Nmul_A1646 Nitrosospira multiformis ATCC 25196 transposase YP_412337.1 1883492 R 323848 CDS YP_412338.1 82702772 3785590 1884659..1887217 1 NC_007614.1 E1-E2 type ATPase 1887217 3785590 Nmul_A1648 Nitrosospira multiformis ATCC 25196 E1-E2 type ATPase YP_412338.1 1884659 D 323848 CDS YP_412339.1 82702773 3785591 complement(1887553..1887945) 1 NC_007614.1 transport-associated protein 1887945 3785591 Nmul_A1649 Nitrosospira multiformis ATCC 25196 transport-associated protein YP_412339.1 1887553 R 323848 CDS YP_412340.1 82702774 3785592 complement(1888138..1888920) 1 NC_007614.1 hypothetical protein 1888920 3785592 Nmul_A1650 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412340.1 1888138 R 323848 CDS YP_412341.1 82702775 3785593 1889080..1889382 1 NC_007614.1 hypothetical protein 1889382 3785593 Nmul_A1651 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412341.1 1889080 D 323848 CDS YP_412342.1 82702776 3785594 1889487..1891790 1 NC_007614.1 hypothetical protein 1891790 3785594 Nmul_A1652 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412342.1 1889487 D 323848 CDS YP_412343.1 82702777 3785595 complement(1891997..1892929) 1 NC_007614.1 H+-transporting two-sector ATPase subunit gamma 1892929 3785595 Nmul_A1653 Nitrosospira multiformis ATCC 25196 H+-transporting two-sector ATPase subunit gamma YP_412343.1 1891997 R 323848 CDS YP_412344.1 82702778 3785596 complement(1892977..1894512) 1 NC_007614.1 produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 1894512 3785596 Nmul_A1654 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit alpha YP_412344.1 1892977 R 323848 CDS YP_412345.1 82702779 3785597 complement(1894620..1895495) 1 NC_007614.1 H+-transporting two-sector ATPase subunit B/B' 1895495 3785597 Nmul_A1655 Nitrosospira multiformis ATCC 25196 H+-transporting two-sector ATPase subunit B/B' YP_412345.1 1894620 R 323848 CDS YP_412346.1 82702780 3785598 complement(1895499..1895780) 1 NC_007614.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 1895780 3785598 Nmul_A1656 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit C YP_412346.1 1895499 R 323848 CDS YP_412347.1 82702781 3785599 complement(1895790..1896545) 1 NC_007614.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 1896545 3785599 Nmul_A1657 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit A YP_412347.1 1895790 R 323848 CDS YP_412348.1 82702782 3785600 complement(1896551..1896892) 1 NC_007614.1 hypothetical protein 1896892 3785600 Nmul_A1658 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412348.1 1896551 R 323848 CDS YP_412349.1 82702783 3785646 complement(1896889..1897380) 1 NC_007614.1 F0F1-ATPase subunit 1897380 3785646 Nmul_A1659 Nitrosospira multiformis ATCC 25196 F0F1-ATPase subunit YP_412349.1 1896889 R 323848 CDS YP_412350.1 82702784 3785647 complement(1897412..1897804) 1 NC_007614.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 1897804 3785647 Nmul_A1660 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit epsilon YP_412350.1 1897412 R 323848 CDS YP_412351.1 82702785 3785648 complement(1897884..1899296) 1 NC_007614.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 1899296 3785648 Nmul_A1661 Nitrosospira multiformis ATCC 25196 F0F1 ATP synthase subunit beta YP_412351.1 1897884 R 323848 CDS YP_412352.1 82702786 3785649 1899977..1901338 1 NC_007614.1 beta-lactamase-like protein 1901338 3785649 Nmul_A1662 Nitrosospira multiformis ATCC 25196 beta-lactamase-like protein YP_412352.1 1899977 D 323848 CDS YP_412353.1 82702787 3785650 1901654..1902781 1 NC_007614.1 metal dependent phosphohydrolase 1902781 3785650 Nmul_A1663 Nitrosospira multiformis ATCC 25196 metal dependent phosphohydrolase YP_412353.1 1901654 D 323848 CDS YP_412354.1 82702788 3785651 1903066..1903302 1 NC_007614.1 hydrogenase assembly chaperone HypC/HupF 1903302 3785651 Nmul_A1664 Nitrosospira multiformis ATCC 25196 hydrogenase assembly chaperone HypC/HupF YP_412354.1 1903066 D 323848 CDS YP_412355.1 82702789 3785652 1903295..1903642 1 NC_007614.1 hydrogenase expression/synthesis, HypA 1903642 3785652 Nmul_A1665 Nitrosospira multiformis ATCC 25196 hydrogenase expression/synthesis, HypA YP_412355.1 1903295 D 323848 CDS YP_412356.1 82702790 3785653 1903661..1904467 1 NC_007614.1 hydrogenase accessory protein HypB 1904467 3785653 Nmul_A1666 Nitrosospira multiformis ATCC 25196 hydrogenase accessory protein HypB YP_412356.1 1903661 D 323848 CDS YP_412357.1 82702791 3785654 1904464..1905621 1 NC_007614.1 hydrogenase formation HypD protein 1905621 3785654 Nmul_A1667 Nitrosospira multiformis ATCC 25196 hydrogenase formation HypD protein YP_412357.1 1904464 D 323848 CDS YP_412358.1 82702792 3785655 1905707..1908019 1 NC_007614.1 (NiFe) hydrogenase maturation protein HypF 1908019 3785655 Nmul_A1668 Nitrosospira multiformis ATCC 25196 (NiFe) hydrogenase maturation protein HypF YP_412358.1 1905707 D 323848 CDS YP_412359.1 82702793 3785656 1908009..1909013 1 NC_007614.1 hydrogenase expression/formation protein HypE 1909013 3785656 Nmul_A1669 Nitrosospira multiformis ATCC 25196 hydrogenase expression/formation protein HypE YP_412359.1 1908009 D 323848 CDS YP_412360.1 82702794 3785657 1909020..1910816 1 NC_007614.1 hydrogen dehydrogenase 1910816 3785657 Nmul_A1670 Nitrosospira multiformis ATCC 25196 hydrogen dehydrogenase YP_412360.1 1909020 D 323848 CDS YP_412361.1 82702795 3785658 1910813..1911550 1 NC_007614.1 hydrogen dehydrogenase 1911550 3785658 Nmul_A1671 Nitrosospira multiformis ATCC 25196 hydrogen dehydrogenase YP_412361.1 1910813 D 323848 CDS YP_412362.1 82702796 3785659 1911540..1912088 1 NC_007614.1 hydrogen dehydrogenase 1912088 3785659 Nmul_A1672 Nitrosospira multiformis ATCC 25196 hydrogen dehydrogenase YP_412362.1 1911540 D 323848 CDS YP_412363.1 82702797 3785660 1912154..1913635 1 NC_007614.1 nickel-dependent hydrogenase, large subunit 1913635 3785660 Nmul_A1673 Nitrosospira multiformis ATCC 25196 nickel-dependent hydrogenase, large subunit YP_412363.1 1912154 D 323848 CDS YP_412364.1 82702798 3785661 1913907..1914629 1 NC_007614.1 hypothetical protein 1914629 3785661 Nmul_A1674 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412364.1 1913907 D 323848 CDS YP_412365.1 82702799 3785662 1914593..1915138 1 NC_007614.1 HoxW protein 1915138 3785662 Nmul_A1675 Nitrosospira multiformis ATCC 25196 HoxW protein YP_412365.1 1914593 D 323848 CDS YP_412366.1 82702800 3785663 1915119..1917788 1 NC_007614.1 GCN5-like N-acetyltransferase 1917788 3785663 Nmul_A1676 Nitrosospira multiformis ATCC 25196 GCN5-like N-acetyltransferase YP_412366.1 1915119 D 323848 CDS YP_412367.1 82702801 3785664 1918218..1919084 1 NC_007614.1 hypothetical protein 1919084 3785664 Nmul_A1677 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412367.1 1918218 D 323848 CDS YP_412368.1 82702802 3784604 complement(1919225..1920118) 1 NC_007614.1 hypothetical protein 1920118 3784604 Nmul_A1678 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412368.1 1919225 R 323848 CDS YP_412369.1 82702803 3784605 complement(1920152..1921780) 1 NC_007614.1 Bilirubin oxidase 1921780 3784605 Nmul_A1679 Nitrosospira multiformis ATCC 25196 Bilirubin oxidase YP_412369.1 1920152 R 323848 CDS YP_412370.1 82702804 3784606 complement(1921971..1922483) 1 NC_007614.1 cytochrome c family protein 1922483 3784606 Nmul_A1680 Nitrosospira multiformis ATCC 25196 cytochrome c family protein YP_412370.1 1921971 R 323848 CDS YP_412371.1 82702805 3784607 complement(1922673..1923503) 1 NC_007614.1 hypothetical protein 1923503 3784607 Nmul_A1681 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412371.1 1922673 R 323848 CDS YP_412372.1 82702806 3784608 complement(1923507..1924790) 1 NC_007614.1 pyridine nucleotide-disulfide oxidoreductase class-II 1924790 3784608 Nmul_A1682 Nitrosospira multiformis ATCC 25196 pyridine nucleotide-disulfide oxidoreductase class-II YP_412372.1 1923507 R 323848 CDS YP_412373.1 82702807 3784609 complement(1924883..1925224) 1 NC_007614.1 ArsR family transcriptional regulator 1925224 3784609 Nmul_A1683 Nitrosospira multiformis ATCC 25196 ArsR family transcriptional regulator YP_412373.1 1924883 R 323848 CDS YP_412374.1 82702808 3784610 complement(1925217..1925723) 1 NC_007614.1 YeeE/YedE 1925723 3784610 Nmul_A1684 Nitrosospira multiformis ATCC 25196 YeeE/YedE YP_412374.1 1925217 R 323848 CDS YP_412375.1 82702809 3784611 complement(1925737..1926171) 1 NC_007614.1 YeeE/YedE 1926171 3784611 Nmul_A1685 Nitrosospira multiformis ATCC 25196 YeeE/YedE YP_412375.1 1925737 R 323848 CDS YP_412376.1 82702810 3784612 1926344..1927204 1 NC_007614.1 beta-lactamase-like protein 1927204 3784612 Nmul_A1686 Nitrosospira multiformis ATCC 25196 beta-lactamase-like protein YP_412376.1 1926344 D 323848 CDS YP_412377.1 82702811 3784613 complement(1927594..1927941) 1 NC_007614.1 transposase IS4 1927941 3784613 Nmul_A1687 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_412377.1 1927594 R 323848 CDS YP_412378.1 82702812 3784614 complement(1927983..1928351) 1 NC_007614.1 transposase 1928351 3784614 Nmul_A1688 Nitrosospira multiformis ATCC 25196 transposase YP_412378.1 1927983 R 323848 CDS YP_412379.1 82702813 3784615 1929024..1930148 1 NC_007614.1 cyanophycinase-like protein 1930148 3784615 Nmul_A1689 Nitrosospira multiformis ATCC 25196 cyanophycinase-like protein YP_412379.1 1929024 D 323848 CDS YP_412380.1 82702814 3784616 complement(1930427..1931335) 1 NC_007614.1 Ion transport protein 1931335 3784616 Nmul_A1690 Nitrosospira multiformis ATCC 25196 Ion transport protein YP_412380.1 1930427 R 323848 CDS YP_412381.1 82702815 3784617 1931502..1931933 1 NC_007614.1 K+ channel, pore region 1931933 3784617 Nmul_A1691 Nitrosospira multiformis ATCC 25196 K+ channel, pore region YP_412381.1 1931502 D 323848 CDS YP_412382.1 82702816 3784618 complement(1932053..1933195) 1 NC_007614.1 integrase catalytic subunit 1933195 3784618 Nmul_A1692 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412382.1 1932053 R 323848 CDS YP_412383.1 82702817 3784619 complement(1933205..1933708) 1 NC_007614.1 integrase catalytic subunit 1933708 3784619 Nmul_A1693 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412383.1 1933205 R 323848 CDS YP_412384.1 82702818 3784620 1933796..1934197 1 NC_007614.1 transposase IS3/IS911 1934197 3784620 Nmul_A1694 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412384.1 1933796 D 323848 CDS YP_412385.1 82702819 3784621 1934194..1934427 1 NC_007614.1 putative transposase 1934427 3784621 Nmul_A1695 Nitrosospira multiformis ATCC 25196 putative transposase YP_412385.1 1934194 D 323848 CDS YP_412386.1 82702820 3784622 1934450..1934722 1 NC_007614.1 putative transposase 1934722 3784622 Nmul_A1696 Nitrosospira multiformis ATCC 25196 putative transposase YP_412386.1 1934450 D 323848 CDS YP_412387.1 82702821 3784623 1934991..1935320 1 NC_007614.1 hypothetical protein 1935320 3784623 Nmul_A1697 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412387.1 1934991 D 323848 CDS YP_412388.1 82702822 3784797 1937321..1938556 1 NC_007614.1 PA-phosphatase-like phosphoesterase 1938556 3784797 Nmul_A1698 Nitrosospira multiformis ATCC 25196 PA-phosphatase-like phosphoesterase YP_412388.1 1937321 D 323848 CDS YP_412389.1 82702823 3784798 1938758..1939012 1 NC_007614.1 hypothetical protein 1939012 3784798 Nmul_A1699 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412389.1 1938758 D 323848 CDS YP_412390.1 82702824 3784799 complement(1939445..1940905) 1 NC_007614.1 homospermidine synthase 1940905 3784799 Nmul_A1700 Nitrosospira multiformis ATCC 25196 homospermidine synthase YP_412390.1 1939445 R 323848 CDS YP_412391.1 82702825 3784800 1941388..1941750 1 NC_007614.1 hypothetical protein 1941750 3784800 Nmul_A1701 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412391.1 1941388 D 323848 CDS YP_412392.1 82702826 3784801 complement(1941849..1943831) 1 NC_007614.1 Phage integrase 1943831 3784801 Nmul_A1702 Nitrosospira multiformis ATCC 25196 Phage integrase YP_412392.1 1941849 R 323848 CDS YP_412393.1 82702827 3784802 1944063..1944332 1 NC_007614.1 hypothetical protein 1944332 3784802 Nmul_A1703 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412393.1 1944063 D 323848 CDS YP_412394.1 82702828 3784803 1944539..1945276 1 NC_007614.1 extradiol ring-cleavage dioxygenase III subunit B 1945276 3784803 Nmul_A1704 Nitrosospira multiformis ATCC 25196 extradiol ring-cleavage dioxygenase III subunit B YP_412394.1 1944539 D 323848 CDS YP_412395.1 82702829 3784804 complement(1945346..1946446) 1 NC_007614.1 FAD dependent oxidoreductase 1946446 3784804 Nmul_A1705 Nitrosospira multiformis ATCC 25196 FAD dependent oxidoreductase YP_412395.1 1945346 R 323848 CDS YP_412396.1 82702830 3784805 1946726..1947721 1 NC_007614.1 hypothetical protein 1947721 3784805 Nmul_A1706 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412396.1 1946726 D 323848 CDS YP_412397.1 82702831 3784806 1947753..1948481 1 NC_007614.1 haloacid dehalogenase-like hydrolase 1948481 3784806 Nmul_A1707 Nitrosospira multiformis ATCC 25196 haloacid dehalogenase-like hydrolase YP_412397.1 1947753 D 323848 CDS YP_412398.1 82702832 3784807 complement(1948564..1949442) 1 NC_007614.1 hypothetical protein 1949442 3784807 Nmul_A1708 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412398.1 1948564 R 323848 CDS YP_412399.1 82702833 3784808 1949725..1953054 1 NC_007614.1 diguanylate cyclase/phosphodiesterase 1953054 3784808 Nmul_A1709 Nitrosospira multiformis ATCC 25196 diguanylate cyclase/phosphodiesterase YP_412399.1 1949725 D 323848 CDS YP_412400.1 82702834 3784809 1953575..1954447 1 NC_007614.1 zinc binding 2 1954447 3784809 Nmul_A1710 Nitrosospira multiformis ATCC 25196 zinc binding 2 YP_412400.1 1953575 D 323848 CDS YP_412401.1 82702835 3784810 1954479..1954793 1 NC_007614.1 hypothetical protein 1954793 3784810 Nmul_A1711 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412401.1 1954479 D 323848 CDS YP_412402.1 82702836 3784811 1954874..1956511 1 NC_007614.1 phospholipase D/transphosphatidylase 1956511 3784811 Nmul_A1712 Nitrosospira multiformis ATCC 25196 phospholipase D/transphosphatidylase YP_412402.1 1954874 D 323848 CDS YP_412403.1 82702837 3784812 1956963..1957775 1 NC_007614.1 hypothetical protein 1957775 3784812 Nmul_A1713 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412403.1 1956963 D 323848 CDS YP_412404.1 82702838 3784813 complement(1958001..1958354) 1 NC_007614.1 hypothetical protein 1958354 3784813 Nmul_A1714 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412404.1 1958001 R 323848 CDS YP_412405.1 82702839 3786192 1958664..1959155 1 NC_007614.1 CreA 1959155 3786192 Nmul_A1715 Nitrosospira multiformis ATCC 25196 CreA YP_412405.1 1958664 D 323848 CDS YP_412406.1 82702840 3786193 1959441..1959878 1 NC_007614.1 hypothetical protein 1959878 3786193 Nmul_A1716 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412406.1 1959441 D 323848 CDS YP_412407.1 82702841 3786194 1959979..1960242 1 NC_007614.1 membrane anchored protein 1960242 3786194 Nmul_A1717 Nitrosospira multiformis ATCC 25196 membrane anchored protein YP_412407.1 1959979 D 323848 CDS YP_412408.1 82702842 3786195 1960546..1961613 1 NC_007614.1 NADH:flavin oxidoreductase/NADH oxidase 1961613 3786195 Nmul_A1718 Nitrosospira multiformis ATCC 25196 NADH:flavin oxidoreductase/NADH oxidase YP_412408.1 1960546 D 323848 CDS YP_412409.1 82702843 3786196 complement(1961695..1963008) 1 NC_007614.1 cytochrome c, class I 1963008 3786196 Nmul_A1719 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_412409.1 1961695 R 323848 CDS YP_412410.1 82702844 3786197 complement(1963005..1963658) 1 NC_007614.1 cytochrome c 1963658 3786197 Nmul_A1720 Nitrosospira multiformis ATCC 25196 cytochrome c YP_412410.1 1963005 R 323848 CDS YP_412411.1 82702845 3786198 1964041..1965411 1 NC_007614.1 hypothetical protein 1965411 3786198 Nmul_A1721 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412411.1 1964041 D 323848 CDS YP_412412.1 82702846 3786199 1965494..1966993 1 NC_007614.1 glutathione synthase/ribosomal protein S6 modification protein 1966993 3786199 Nmul_A1722 Nitrosospira multiformis ATCC 25196 glutathione synthase/ribosomal protein S6 modification protein YP_412412.1 1965494 D 323848 CDS YP_412413.1 82702847 3786200 complement(1967093..1968073) 1 NC_007614.1 putative glutathione S-transferase 1968073 3786200 Nmul_A1723 Nitrosospira multiformis ATCC 25196 putative glutathione S-transferase YP_412413.1 1967093 R 323848 CDS YP_412414.1 82702848 3786201 complement(1968185..1969258) 1 NC_007614.1 hypothetical protein 1969258 3786201 Nmul_A1724 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412414.1 1968185 R 323848 CDS YP_412415.1 82702849 3786202 complement(1970266..1970430) 1 NC_007614.1 hypothetical protein 1970430 3786202 Nmul_A1725 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412415.1 1970266 R 323848 CDS YP_412416.1 82702850 3786203 complement(1970666..1972102) 1 NC_007614.1 RND efflux system outer membrane lipoprotein NodT 1972102 3786203 Nmul_A1726 Nitrosospira multiformis ATCC 25196 RND efflux system outer membrane lipoprotein NodT YP_412416.1 1970666 R 323848 CDS YP_412417.1 82702851 3786204 complement(1972086..1975265) 1 NC_007614.1 hydrophobe/amphiphile efflux-1 protein 1975265 3786204 Nmul_A1727 Nitrosospira multiformis ATCC 25196 hydrophobe/amphiphile efflux-1 protein YP_412417.1 1972086 R 323848 CDS YP_412418.1 82702852 3786205 complement(1975287..1976378) 1 NC_007614.1 secretion protein HlyD 1976378 3786205 Nmul_A1728 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_412418.1 1975287 R 323848 CDS YP_412419.1 82702853 3786207 complement(1976550..1977545) 1 NC_007614.1 hypothetical protein 1977545 3786207 Nmul_A1730 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412419.1 1976550 R 323848 CDS YP_412420.1 82702854 3786208 complement(1978141..1979511) 1 NC_007614.1 hypothetical protein 1979511 3786208 Nmul_A1731 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412420.1 1978141 R 323848 CDS YP_412421.1 82702855 3786209 complement(1979521..1981101) 1 NC_007614.1 group 1 glycosyl transferase 1981101 3786209 Nmul_A1732 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_412421.1 1979521 R 323848 CDS YP_412422.1 82702856 3786210 complement(1981098..1982237) 1 NC_007614.1 hypothetical protein 1982237 3786210 Nmul_A1733 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412422.1 1981098 R 323848 CDS YP_412423.1 82702857 3786211 complement(1982237..1983508) 1 NC_007614.1 hypothetical protein 1983508 3786211 Nmul_A1734 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412423.1 1982237 R 323848 CDS YP_412424.1 82702858 3786037 complement(1983505..1986207) 1 NC_007614.1 hypothetical protein 1986207 3786037 Nmul_A1735 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412424.1 1983505 R 323848 CDS YP_412425.1 82702859 3786038 complement(1986197..1989205) 1 NC_007614.1 hypothetical protein 1989205 3786038 Nmul_A1736 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412425.1 1986197 R 323848 CDS YP_412426.1 82702860 3786039 complement(1989317..1990363) 1 NC_007614.1 glycine cleavage T protein (aminomethyl transferase) 1990363 3786039 Nmul_A1737 Nitrosospira multiformis ATCC 25196 glycine cleavage T protein (aminomethyl transferase) YP_412426.1 1989317 R 323848 CDS YP_412427.1 82702861 3786040 1990477..1990992 1 NC_007614.1 hypothetical protein 1990992 3786040 Nmul_A1738 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412427.1 1990477 D 323848 CDS YP_412428.1 82702862 3786041 1991274..1992218 1 NC_007614.1 transcriptional regulator CysB-like protein 1992218 3786041 Nmul_A1739 Nitrosospira multiformis ATCC 25196 transcriptional regulator CysB-like protein YP_412428.1 1991274 D 323848 CDS YP_412429.1 82702863 3786042 complement(1992283..1994112) 1 NC_007614.1 ABC transporter-like protein 1994112 3786042 Nmul_A1740 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412429.1 1992283 R 323848 CDS YP_412430.1 82702864 3786043 1994307..1995242 1 NC_007614.1 hypothetical protein 1995242 3786043 Nmul_A1741 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412430.1 1994307 D 323848 CDS YP_412431.1 82702865 3786044 1995239..1995676 1 NC_007614.1 hypothetical protein 1995676 3786044 Nmul_A1742 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412431.1 1995239 D 323848 CDS YP_412432.1 82702866 3786045 complement(1995712..1997316) 1 NC_007614.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 1997316 3786045 Nmul_A1743 Nitrosospira multiformis ATCC 25196 L-aspartate oxidase YP_412432.1 1995712 R 323848 CDS YP_412433.1 82702867 3786046 complement(1997469..1998428) 1 NC_007614.1 cation diffusion facilitator family transporter 1998428 3786046 Nmul_A1744 Nitrosospira multiformis ATCC 25196 cation diffusion facilitator family transporter YP_412433.1 1997469 R 323848 CDS YP_412434.1 82702868 3786047 1998644..1998985 1 NC_007614.1 hypothetical protein 1998985 3786047 Nmul_A1745 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412434.1 1998644 D 323848 CDS YP_412435.1 82702869 3786048 1999395..1999997 1 NC_007614.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 1999997 3786048 Nmul_A1746 Nitrosospira multiformis ATCC 25196 RNA polymerase sigma factor RpoE YP_412435.1 1999395 D 323848 CDS YP_412436.1 82702870 3786049 1999999..2000565 1 NC_007614.1 anti sigma-E protein RseA 2000565 3786049 Nmul_A1747 Nitrosospira multiformis ATCC 25196 anti sigma-E protein RseA YP_412436.1 1999999 D 323848 CDS YP_412437.1 82702871 3786050 2000575..2001561 1 NC_007614.1 sigma E regulatory protein, MucB/RseB 2001561 3786050 Nmul_A1748 Nitrosospira multiformis ATCC 25196 sigma E regulatory protein, MucB/RseB YP_412437.1 2000575 D 323848 CDS YP_412438.1 82702872 3786051 2001686..2003107 1 NC_007614.1 peptidase S1C, Do 2003107 3786051 Nmul_A1749 Nitrosospira multiformis ATCC 25196 peptidase S1C, Do YP_412438.1 2001686 D 323848 CDS YP_412439.1 82702873 3786052 2003108..2003371 1 NC_007614.1 glutaredoxin 2 2003371 3786052 Nmul_A1750 Nitrosospira multiformis ATCC 25196 glutaredoxin 2 YP_412439.1 2003108 D 323848 CDS YP_412440.1 82702874 3786053 2003636..2005429 1 NC_007614.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2005429 3786053 Nmul_A1751 Nitrosospira multiformis ATCC 25196 GTP-binding protein LepA YP_412440.1 2003636 D 323848 CDS YP_412441.1 82702875 3786054 2005538..2006344 1 NC_007614.1 peptidase S26A, signal peptidase I 2006344 3786054 Nmul_A1752 Nitrosospira multiformis ATCC 25196 peptidase S26A, signal peptidase I YP_412441.1 2005538 D 323848 CDS YP_412442.1 82702876 3786055 2006417..2007109 1 NC_007614.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 2007109 rnc 3786055 rnc Nitrosospira multiformis ATCC 25196 ribonuclease III YP_412442.1 2006417 D 323848 CDS YP_412443.1 82702877 3783954 2007224..2008132 1 NC_007614.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2008132 era 3783954 era Nitrosospira multiformis ATCC 25196 GTP-binding protein Era YP_412443.1 2007224 D 323848 CDS YP_412444.1 82702878 3783955 2008125..2008433 1 NC_007614.1 hypothetical protein 2008433 3783955 Nmul_A1755 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412444.1 2008125 D 323848 CDS YP_412445.1 82702879 3783956 2008430..2008732 1 NC_007614.1 hypothetical protein 2008732 3783956 Nmul_A1756 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412445.1 2008430 D 323848 CDS YP_412446.1 82702880 3783957 2008752..2009480 1 NC_007614.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 2009480 recO 3783957 recO Nitrosospira multiformis ATCC 25196 DNA repair protein RecO YP_412446.1 2008752 D 323848 CDS YP_412447.1 82702881 3783958 complement(2009794..2010168) 1 NC_007614.1 hypothetical protein 2010168 3783958 Nmul_A1758 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412447.1 2009794 R 323848 CDS YP_412448.1 82702882 3783959 2010386..2011183 1 NC_007614.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2011183 3783959 Nmul_A1759 Nitrosospira multiformis ATCC 25196 pyridoxine 5'-phosphate synthase YP_412448.1 2010386 D 323848 CDS YP_412449.1 82702883 3783960 2011180..2011557 1 NC_007614.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2011557 acpS 3783960 acpS Nitrosospira multiformis ATCC 25196 4'-phosphopantetheinyl transferase YP_412449.1 2011180 D 323848 CDS YP_412450.1 82702884 3783961 2011558..2012607 1 NC_007614.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 2012607 3783961 Nmul_A1761 Nitrosospira multiformis ATCC 25196 beta-hexosaminidase YP_412450.1 2011558 D 323848 CDS YP_412451.1 82702885 3783962 2012882..2013316 1 NC_007614.1 heat shock protein Hsp20 2013316 3783962 Nmul_A1762 Nitrosospira multiformis ATCC 25196 heat shock protein Hsp20 YP_412451.1 2012882 D 323848 CDS YP_412452.1 82702886 3783963 complement(2013479..2014984) 1 NC_007614.1 hypothetical protein 2014984 3783963 Nmul_A1763 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412452.1 2013479 R 323848 CDS YP_412453.1 82702887 3783964 complement(2015070..2017664) 1 NC_007614.1 dolichyl-phosphate beta-D-mannosyltransferase 2017664 3783964 Nmul_A1764 Nitrosospira multiformis ATCC 25196 dolichyl-phosphate beta-D-mannosyltransferase YP_412453.1 2015070 R 323848 CDS YP_412454.1 82702888 3783965 2018170..2018616 1 NC_007614.1 hypothetical protein 2018616 3783965 Nmul_A1765 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412454.1 2018170 D 323848 CDS YP_412455.1 82702889 3783966 2018737..2019891 1 NC_007614.1 hypothetical protein 2019891 3783966 Nmul_A1766 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412455.1 2018737 D 323848 CDS YP_412456.1 82702890 3783967 2020343..2021002 1 NC_007614.1 hypothetical protein 2021002 3783967 Nmul_A1767 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412456.1 2020343 D 323848 CDS YP_412457.1 82702891 3783968 complement(2021077..2021574) 1 NC_007614.1 hypothetical protein 2021574 3783968 Nmul_A1768 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412457.1 2021077 R 323848 CDS YP_412458.1 82702892 3783969 complement(2021623..2022246) 1 NC_007614.1 putative protein-disulfide isomerase 2022246 3783969 Nmul_A1769 Nitrosospira multiformis ATCC 25196 putative protein-disulfide isomerase YP_412458.1 2021623 R 323848 CDS YP_412459.1 82702893 3783970 complement(2022378..2024189) 1 NC_007614.1 GTP-binding protein TypA 2024189 3783970 Nmul_A1770 Nitrosospira multiformis ATCC 25196 GTP-binding protein TypA YP_412459.1 2022378 R 323848 CDS YP_412460.1 82702894 3783971 complement(2024494..2024793) 1 NC_007614.1 competence protein ComEA helix-hairpin-helix region 2024793 3783971 Nmul_A1771 Nitrosospira multiformis ATCC 25196 competence protein ComEA helix-hairpin-helix region YP_412460.1 2024494 R 323848 CDS YP_412461.1 82702895 3783972 complement(2024926..2025813) 1 NC_007614.1 hypothetical protein 2025813 3783972 Nmul_A1772 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412461.1 2024926 R 323848 CDS YP_412462.1 82702896 3783973 complement(2026585..2027376) 1 NC_007614.1 Crp/FNR family transcriptional regulator 2027376 3783973 Nmul_A1773 Nitrosospira multiformis ATCC 25196 Crp/FNR family transcriptional regulator YP_412462.1 2026585 R 323848 CDS YP_412463.1 82702897 3784352 complement(2027407..2027877) 1 NC_007614.1 BadM/Rrf2 family transcriptional regulator 2027877 3784352 Nmul_A1774 Nitrosospira multiformis ATCC 25196 BadM/Rrf2 family transcriptional regulator YP_412463.1 2027407 R 323848 CDS YP_412464.1 82702898 3784353 complement(2027930..2028781) 1 NC_007614.1 cytochrome c oxidase subunit III 2028781 3784353 Nmul_A1775 Nitrosospira multiformis ATCC 25196 cytochrome c oxidase subunit III YP_412464.1 2027930 R 323848 CDS YP_412465.1 82702899 3784354 complement(2029010..2030599) 1 NC_007614.1 cytochrome-c oxidase 2030599 3784354 Nmul_A1776 Nitrosospira multiformis ATCC 25196 cytochrome-c oxidase YP_412465.1 2029010 R 323848 CDS YP_412466.1 82702900 3784355 complement(2030619..2031752) 1 NC_007614.1 cytochrome c oxidase subunit II 2031752 3784355 Nmul_A1777 Nitrosospira multiformis ATCC 25196 cytochrome c oxidase subunit II YP_412466.1 2030619 R 323848 CDS YP_412467.1 82702901 3784356 2032214..2032468 1 NC_007614.1 hypothetical protein 2032468 3784356 Nmul_A1778 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412467.1 2032214 D 323848 CDS YP_412468.1 82702902 3784357 complement(2032613..2033233) 1 NC_007614.1 TetR family transcriptional regulator 2033233 3784357 Nmul_A1779 Nitrosospira multiformis ATCC 25196 TetR family transcriptional regulator YP_412468.1 2032613 R 323848 CDS YP_412469.1 82702903 3784358 2033820..2034014 1 NC_007614.1 hypothetical protein 2034014 3784358 Nmul_A1780 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412469.1 2033820 D 323848 CDS YP_412470.1 82702904 3784359 2034134..2035276 1 NC_007614.1 glycosyl transferase family protein 2035276 3784359 Nmul_A1781 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_412470.1 2034134 D 323848 CDS YP_412471.1 82702905 3784360 complement(2035301..2036290) 1 NC_007614.1 glycosyltransferase 2036290 3784360 Nmul_A1782 Nitrosospira multiformis ATCC 25196 glycosyltransferase YP_412471.1 2035301 R 323848 CDS YP_412472.1 82702906 3784361 complement(2036280..2037287) 1 NC_007614.1 glycosyl transferase family protein 2037287 3784361 Nmul_A1783 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_412472.1 2036280 R 323848 CDS YP_412473.1 82702907 3784362 2037432..2037899 1 NC_007614.1 YbhB and YbcL 2037899 3784362 Nmul_A1784 Nitrosospira multiformis ATCC 25196 YbhB and YbcL YP_412473.1 2037432 D 323848 CDS YP_412474.1 82702908 3784363 2038144..2038548 1 NC_007614.1 hypothetical protein 2038548 3784363 Nmul_A1785 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412474.1 2038144 D 323848 CDS YP_412475.1 82702909 3784364 complement(2038670..2039176) 1 NC_007614.1 lipoprotein Blc 2039176 3784364 Nmul_A1786 Nitrosospira multiformis ATCC 25196 lipoprotein Blc YP_412475.1 2038670 R 323848 CDS YP_412476.1 82702910 3784365 complement(2039379..2039837) 1 NC_007614.1 putative PAS/PAC sensor protein 2039837 3784365 Nmul_A1787 Nitrosospira multiformis ATCC 25196 putative PAS/PAC sensor protein YP_412476.1 2039379 R 323848 CDS YP_412477.1 82702911 3784366 complement(2039909..2040379) 1 NC_007614.1 hypothetical protein 2040379 3784366 Nmul_A1788 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412477.1 2039909 R 323848 CDS YP_412478.1 82702912 3784367 complement(2040479..2041273) 1 NC_007614.1 inositol-1(or 4)-monophosphatase 2041273 3784367 Nmul_A1789 Nitrosospira multiformis ATCC 25196 inositol-1(or 4)-monophosphatase YP_412478.1 2040479 R 323848 CDS YP_412479.1 82702913 3784368 complement(2041280..2042086) 1 NC_007614.1 hypothetical protein 2042086 3784368 Nmul_A1790 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412479.1 2041280 R 323848 CDS YP_412480.1 82702914 3784369 complement(2042221..2043447) 1 NC_007614.1 glycosyl transferase family protein 2043447 3784369 Nmul_A1791 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_412480.1 2042221 R 323848 CDS YP_412481.1 82702915 3784370 complement(2043462..2044937) 1 NC_007614.1 bifunctional ADP-heptose synthase 2044937 3784370 Nmul_A1792 Nitrosospira multiformis ATCC 25196 bifunctional ADP-heptose synthase YP_412481.1 2043462 R 323848 CDS YP_412482.1 82702916 3786344 complement(2045026..2045634) 1 NC_007614.1 HAD family hydrolase 2045634 3786344 Nmul_A1793 Nitrosospira multiformis ATCC 25196 HAD family hydrolase YP_412482.1 2045026 R 323848 CDS YP_412483.1 82702917 3786345 complement(2045625..2046341) 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 2046341 3786345 Nmul_A1794 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_412483.1 2045625 R 323848 CDS YP_412484.1 82702918 3786346 complement(2046334..2048286) 1 NC_007614.1 phosphoheptose isomerase 2048286 3786346 Nmul_A1795 Nitrosospira multiformis ATCC 25196 phosphoheptose isomerase YP_412484.1 2046334 R 323848 CDS YP_412485.1 82702919 3786347 complement(2048790..2052788) 1 NC_007614.1 hypothetical protein 2052788 3786347 Nmul_A1796 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412485.1 2048790 R 323848 CDS YP_412486.1 82702920 3786348 complement(2052858..2054714) 1 NC_007614.1 surface antigen (D15) 2054714 3786348 Nmul_A1797 Nitrosospira multiformis ATCC 25196 surface antigen (D15) YP_412486.1 2052858 R 323848 CDS YP_412487.1 82702921 3786349 2054989..2056896 1 NC_007614.1 ATP-dependent metalloprotease FtsH 2056896 3786349 Nmul_A1798 Nitrosospira multiformis ATCC 25196 ATP-dependent metalloprotease FtsH YP_412487.1 2054989 D 323848 CDS YP_412488.1 82702922 3786350 2057711..2059129 1 NC_007614.1 DEAD/DEAH box helicase-like protein 2059129 3786350 Nmul_A1799 Nitrosospira multiformis ATCC 25196 DEAD/DEAH box helicase-like protein YP_412488.1 2057711 D 323848 CDS YP_412489.1 82702923 3786351 complement(2059209..2059595) 1 NC_007614.1 globin family protein 2059595 3786351 Nmul_A1800 Nitrosospira multiformis ATCC 25196 globin family protein YP_412489.1 2059209 R 323848 CDS YP_412490.1 82702924 3786352 complement(2059646..2060416) 1 NC_007614.1 hypothetical protein 2060416 3786352 Nmul_A1801 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412490.1 2059646 R 323848 CDS YP_412491.1 82702925 3786353 2060638..2061165 1 NC_007614.1 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2061165 3786353 Nmul_A1802 Nitrosospira multiformis ATCC 25196 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_412491.1 2060638 D 323848 CDS YP_412492.1 82702926 3786354 complement(2061303..2062661) 1 NC_007614.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2062661 3786354 Nmul_A1803 Nitrosospira multiformis ATCC 25196 DNA repair protein RadA YP_412492.1 2061303 R 323848 CDS YP_412493.1 82702927 3786355 complement(2062799..2064121) 1 NC_007614.1 ferredoxin-dependent glutamate synthase 2064121 3786355 Nmul_A1804 Nitrosospira multiformis ATCC 25196 ferredoxin-dependent glutamate synthase YP_412493.1 2062799 R 323848 CDS YP_412494.1 82702928 3786356 complement(2064133..2065848) 1 NC_007614.1 hypothetical protein 2065848 3786356 Nmul_A1805 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412494.1 2064133 R 323848 CDS YP_412495.1 82702929 3786357 2066384..2066776 1 NC_007614.1 hypothetical protein 2066776 3786357 Nmul_A1806 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412495.1 2066384 D 323848 CDS YP_412496.1 82702930 3786358 2066832..2068493 1 NC_007614.1 hypothetical protein 2068493 3786358 Nmul_A1807 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412496.1 2066832 D 323848 CDS YP_412497.1 82702931 3786359 2068561..2069259 1 NC_007614.1 pirin-like protein 2069259 3786359 Nmul_A1808 Nitrosospira multiformis ATCC 25196 pirin-like protein YP_412497.1 2068561 D 323848 CDS YP_412498.1 82702932 3786360 complement(2069267..2070685) 1 NC_007614.1 hypothetical protein 2070685 3786360 Nmul_A1809 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412498.1 2069267 R 323848 CDS YP_412499.1 82702933 3786361 complement(2070654..2071622) 1 NC_007614.1 acetyl-CoA carboxylase, carboxyl transferase subunit alpha 2071622 3786361 Nmul_A1810 Nitrosospira multiformis ATCC 25196 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_412499.1 2070654 R 323848 CDS YP_412500.1 82702934 3786362 2071827..2073500 1 NC_007614.1 ABC transporter-like protein 2073500 3786362 Nmul_A1811 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412500.1 2071827 D 323848 CDS YP_412501.1 82702935 3786363 complement(2073561..2074106) 1 NC_007614.1 N-acetyl-anhydromuranmyl-L-alanine amidase 2074106 3786363 Nmul_A1812 Nitrosospira multiformis ATCC 25196 N-acetyl-anhydromuranmyl-L-alanine amidase YP_412501.1 2073561 R 323848 CDS YP_412502.1 82702936 3784907 complement(2074175..2074417) 1 NC_007614.1 hypothetical protein 2074417 3784907 Nmul_A1813 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412502.1 2074175 R 323848 CDS YP_412503.1 82702937 3784909 complement(2074994..2075962) 1 NC_007614.1 farnesyltranstransferase 2075962 3784909 Nmul_A1814 Nitrosospira multiformis ATCC 25196 farnesyltranstransferase YP_412503.1 2074994 R 323848 CDS YP_412504.1 82702938 3784910 2076155..2076466 1 NC_007614.1 50S ribosomal protein L21 2076466 rplU 3784910 rplU Nitrosospira multiformis ATCC 25196 50S ribosomal protein L21 YP_412504.1 2076155 D 323848 CDS YP_412505.1 82702939 3784911 2076479..2076736 1 NC_007614.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 2076736 rpmA 3784911 rpmA Nitrosospira multiformis ATCC 25196 50S ribosomal protein L27 YP_412505.1 2076479 D 323848 CDS YP_412506.1 82702940 3784912 2076810..2077874 1 NC_007614.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 2077874 obgE 3784912 obgE Nitrosospira multiformis ATCC 25196 GTPase ObgE YP_412506.1 2076810 D 323848 CDS YP_412507.1 82702941 3784913 2078021..2078236 1 NC_007614.1 hypothetical protein 2078236 3784913 Nmul_A1818 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412507.1 2078021 D 323848 CDS YP_412508.1 82702942 3784914 2078249..2078764 1 NC_007614.1 hypothetical protein 2078764 3784914 Nmul_A1819 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412508.1 2078249 D 323848 CDS YP_412509.1 82702943 3784915 2078758..2079591 1 NC_007614.1 hypothetical protein 2079591 3784915 Nmul_A1820 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412509.1 2078758 D 323848 CDS YP_412510.1 82702944 3784916 2079588..2079986 1 NC_007614.1 hypothetical protein 2079986 3784916 Nmul_A1821 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412510.1 2079588 D 323848 CDS YP_412511.1 82702945 3784917 complement(2080040..2081326) 1 NC_007614.1 PepSY-associated TM helix-containing protein 2081326 3784917 Nmul_A1822 Nitrosospira multiformis ATCC 25196 PepSY-associated TM helix-containing protein YP_412511.1 2080040 R 323848 CDS YP_412512.1 82702946 3784918 complement(2081331..2082998) 1 NC_007614.1 cyclic peptide transporter 2082998 3784918 Nmul_A1823 Nitrosospira multiformis ATCC 25196 cyclic peptide transporter YP_412512.1 2081331 R 323848 CDS YP_412513.1 82702947 3784919 2083512..2084606 1 NC_007614.1 hypothetical protein 2084606 3784919 Nmul_A1824 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412513.1 2083512 D 323848 CDS YP_412514.1 82702948 3784920 2084617..2085924 1 NC_007614.1 L-lysine 6-monooxygenase (NADPH) 2085924 3784920 Nmul_A1825 Nitrosospira multiformis ATCC 25196 L-lysine 6-monooxygenase (NADPH) YP_412514.1 2084617 D 323848 CDS YP_412515.1 82702949 3784921 2086018..2088372 1 NC_007614.1 TonB-dependent siderophore receptor 2088372 3784921 Nmul_A1826 Nitrosospira multiformis ATCC 25196 TonB-dependent siderophore receptor YP_412515.1 2086018 D 323848 CDS YP_412516.1 82702950 3784922 2088427..2089398 1 NC_007614.1 lipolytic protein 2089398 3784922 Nmul_A1827 Nitrosospira multiformis ATCC 25196 lipolytic protein YP_412516.1 2088427 D 323848 CDS YP_412517.1 82702951 3784923 complement(2089414..2089803) 1 NC_007614.1 hypothetical protein 2089803 3784923 Nmul_A1828 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412517.1 2089414 R 323848 CDS YP_412518.1 82702952 3784924 complement(2089921..2102034) 1 NC_007614.1 amino acid adenylation 2102034 3784924 Nmul_A1829 Nitrosospira multiformis ATCC 25196 amino acid adenylation YP_412518.1 2089921 R 323848 CDS YP_412519.1 82702953 3785939 complement(2102035..2105451) 1 NC_007614.1 amino acid adenylation 2105451 3785939 Nmul_A1830 Nitrosospira multiformis ATCC 25196 amino acid adenylation YP_412519.1 2102035 R 323848 CDS YP_412520.1 82702954 3785940 complement(2105518..2110242) 1 NC_007614.1 beta-ketoacyl synthase 2110242 3785940 Nmul_A1831 Nitrosospira multiformis ATCC 25196 beta-ketoacyl synthase YP_412520.1 2105518 R 323848 CDS YP_412521.1 82702955 3785941 complement(2110242..2115647) 1 NC_007614.1 amino acid adenylation 2115647 3785941 Nmul_A1832 Nitrosospira multiformis ATCC 25196 amino acid adenylation YP_412521.1 2110242 R 323848 CDS YP_412522.1 82702956 3785942 complement(2115684..2116526) 1 NC_007614.1 4'-phosphopantetheinyl transferase 2116526 3785942 Nmul_A1833 Nitrosospira multiformis ATCC 25196 4'-phosphopantetheinyl transferase YP_412522.1 2115684 R 323848 CDS YP_412523.1 82702957 3785943 complement(2116514..2117275) 1 NC_007614.1 thioesterase 2117275 3785943 Nmul_A1834 Nitrosospira multiformis ATCC 25196 thioesterase YP_412523.1 2116514 R 323848 CDS YP_412524.1 82702958 3785944 complement(2117275..2117505) 1 NC_007614.1 MbtH-like protein 2117505 3785944 Nmul_A1835 Nitrosospira multiformis ATCC 25196 MbtH-like protein YP_412524.1 2117275 R 323848 CDS YP_412525.1 82702959 3785945 2118087..2119229 1 NC_007614.1 integrase catalytic subunit 2119229 3785945 Nmul_A1836 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412525.1 2118087 D 323848 CDS YP_412526.1 82702960 3785948 complement(2120287..2120796) 1 NC_007614.1 RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease; extracytoplasmic-function sigma-70 factor 2120796 3785948 Nmul_A1839 Nitrosospira multiformis ATCC 25196 extracytoplasmic-function sigma-70 factor YP_412526.1 2120287 R 323848 CDS YP_412527.1 82702961 3785949 2120944..2122332 1 NC_007614.1 RND efflux system outer membrane lipoprotein NodT 2122332 3785949 Nmul_A1840 Nitrosospira multiformis ATCC 25196 RND efflux system outer membrane lipoprotein NodT YP_412527.1 2120944 D 323848 CDS YP_412528.1 82702962 3785950 2122326..2123558 1 NC_007614.1 secretion protein HlyD 2123558 3785950 Nmul_A1841 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_412528.1 2122326 D 323848 CDS YP_412529.1 82702963 3785951 2123545..2126841 1 NC_007614.1 acriflavin resistance protein 2126841 3785951 Nmul_A1842 Nitrosospira multiformis ATCC 25196 acriflavin resistance protein YP_412529.1 2123545 D 323848 CDS YP_412530.1 82702964 3785952 2127049..2128167 1 NC_007614.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 2128167 3785952 Nmul_A1843 Nitrosospira multiformis ATCC 25196 gamma-glutamyl kinase YP_412530.1 2127049 D 323848 CDS YP_412531.1 82702965 3785953 complement(2128354..2128884) 1 NC_007614.1 putative lipoprotein 2128884 3785953 Nmul_A1844 Nitrosospira multiformis ATCC 25196 putative lipoprotein YP_412531.1 2128354 R 323848 CDS YP_412532.1 82702966 3785954 complement(2128884..2129483) 1 NC_007614.1 hypothetical protein 2129483 3785954 Nmul_A1845 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412532.1 2128884 R 323848 CDS YP_412533.1 82702967 3785955 complement(2129543..2130874) 1 NC_007614.1 putative ferredoxin 2130874 3785955 Nmul_A1846 Nitrosospira multiformis ATCC 25196 putative ferredoxin YP_412533.1 2129543 R 323848 CDS YP_412534.1 82702968 3785956 complement(2131034..2131453) 1 NC_007614.1 rubrerythrin 2131453 3785956 Nmul_A1847 Nitrosospira multiformis ATCC 25196 rubrerythrin YP_412534.1 2131034 R 323848 CDS YP_412535.1 82702969 3785957 complement(2131652..2132602) 1 NC_007614.1 D-isomer specific 2-hydroxyacid dehydrogenase 2132602 3785957 Nmul_A1848 Nitrosospira multiformis ATCC 25196 D-isomer specific 2-hydroxyacid dehydrogenase YP_412535.1 2131652 R 323848 CDS YP_412536.1 82702970 3785958 complement(2132683..2133588) 1 NC_007614.1 hypothetical protein 2133588 3785958 Nmul_A1849 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412536.1 2132683 R 323848 CDS YP_412537.1 82702971 3786592 2133663..2134856 1 NC_007614.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2134856 3786592 Nmul_A1850 Nitrosospira multiformis ATCC 25196 succinyldiaminopimelate transaminase YP_412537.1 2133663 D 323848 CDS YP_412538.1 82702972 3786593 2134905..2135726 1 NC_007614.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2135726 dapD 3786593 dapD Nitrosospira multiformis ATCC 25196 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_412538.1 2134905 D 323848 CDS YP_412539.1 82702973 3786594 2135784..2136920 1 NC_007614.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2136920 3786594 Nmul_A1852 Nitrosospira multiformis ATCC 25196 succinyl-diaminopimelate desuccinylase YP_412539.1 2135784 D 323848 CDS YP_412540.1 82702974 3786595 complement(2136946..2137266) 1 NC_007614.1 hypothetical protein 2137266 3786595 Nmul_A1853 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412540.1 2136946 R 323848 CDS YP_412541.1 82702975 3786596 2137370..2138278 1 NC_007614.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2138278 3786596 Nmul_A1854 Nitrosospira multiformis ATCC 25196 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_412541.1 2137370 D 323848 CDS YP_412542.1 82702976 3786597 complement(2138266..2139213) 1 NC_007614.1 pseudouridine synthase Rsu 2139213 3786597 Nmul_A1855 Nitrosospira multiformis ATCC 25196 pseudouridine synthase Rsu YP_412542.1 2138266 R 323848 CDS YP_412543.1 82702977 3786598 complement(2139463..2140062) 1 NC_007614.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 2140062 recR 3786598 recR Nitrosospira multiformis ATCC 25196 recombination protein RecR YP_412543.1 2139463 R 323848 CDS YP_412544.1 82702978 3786599 complement(2140125..2140451) 1 NC_007614.1 hypothetical protein 2140451 3786599 Nmul_A1857 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412544.1 2140125 R 323848 CDS YP_412545.1 82702979 3786600 complement(2140463..2142205) 1 NC_007614.1 DNA-directed DNA polymerase 2142205 3786600 Nmul_A1858 Nitrosospira multiformis ATCC 25196 DNA-directed DNA polymerase YP_412545.1 2140463 R 323848 CDS YP_412546.1 82702980 3786602 complement(2142986..2143384) 1 NC_007614.1 hypothetical protein 2143384 3786602 Nmul_A1859 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412546.1 2142986 R 323848 CDS YP_412547.1 82702981 3786604 2145020..2145958 1 NC_007614.1 diguanylate cyclase 2145958 3786604 Nmul_A1860 Nitrosospira multiformis ATCC 25196 diguanylate cyclase YP_412547.1 2145020 D 323848 CDS YP_412548.1 82702982 3786605 2146194..2147036 1 NC_007614.1 putative PAS/PAC sensor protein 2147036 3786605 Nmul_A1861 Nitrosospira multiformis ATCC 25196 putative PAS/PAC sensor protein YP_412548.1 2146194 D 323848 CDS YP_412549.1 82702983 3786606 complement(2147028..2147969) 1 NC_007614.1 tRNA pseudouridine synthase B 2147969 3786606 Nmul_A1862 Nitrosospira multiformis ATCC 25196 tRNA pseudouridine synthase B YP_412549.1 2147028 R 323848 CDS YP_412550.1 82702984 3786607 complement(2148153..2148533) 1 NC_007614.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2148533 rbfA 3786607 rbfA Nitrosospira multiformis ATCC 25196 ribosome-binding factor A YP_412550.1 2148153 R 323848 CDS YP_412551.1 82702985 3786608 complement(2148562..2151192) 1 NC_007614.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 2151192 infB 3786608 infB Nitrosospira multiformis ATCC 25196 translation initiation factor IF-2 YP_412551.1 2148562 R 323848 CDS YP_412552.1 82702986 3786515 complement(2151210..2152697) 1 NC_007614.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2152697 nusA 3786515 nusA Nitrosospira multiformis ATCC 25196 transcription elongation factor NusA YP_412552.1 2151210 R 323848 CDS YP_412553.1 82702987 3786516 complement(2152724..2153152) 1 NC_007614.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 2153152 3786516 Nmul_A1866 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412553.1 2152724 R 323848 CDS YP_412554.1 82702988 3786517 2153459..2154511 1 NC_007614.1 AMP-dependent synthetase and ligase 2154511 3786517 Nmul_A1867 Nitrosospira multiformis ATCC 25196 AMP-dependent synthetase and ligase YP_412554.1 2153459 D 323848 CDS YP_412555.1 82702989 3786518 2154508..2155428 1 NC_007614.1 AMP-dependent synthetase and ligase 2155428 3786518 Nmul_A1868 Nitrosospira multiformis ATCC 25196 AMP-dependent synthetase and ligase YP_412555.1 2154508 D 323848 CDS YP_412556.1 82702990 3786519 2155495..2156487 1 NC_007614.1 beta-lactamase-like protein 2156487 3786519 Nmul_A1869 Nitrosospira multiformis ATCC 25196 beta-lactamase-like protein YP_412556.1 2155495 D 323848 CDS YP_412557.1 82702991 3786520 complement(2156570..2157409) 1 NC_007614.1 tRNA/rRNA methyltransferase SpoU 2157409 3786520 Nmul_A1870 Nitrosospira multiformis ATCC 25196 tRNA/rRNA methyltransferase SpoU YP_412557.1 2156570 R 323848 CDS YP_412558.1 82702992 3786521 complement(2157406..2158047) 1 NC_007614.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 2158047 greB 3786521 greB Nitrosospira multiformis ATCC 25196 transcription elongation factor GreB YP_412558.1 2157406 R 323848 CDS YP_412559.1 82702993 3786522 complement(2158172..2159176) 1 NC_007614.1 glucokinase 2159176 3786522 Nmul_A1872 Nitrosospira multiformis ATCC 25196 glucokinase YP_412559.1 2158172 R 323848 CDS YP_412560.1 82702994 3786523 complement(2159173..2159988) 1 NC_007614.1 hypothetical protein 2159988 3786523 Nmul_A1873 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412560.1 2159173 R 323848 CDS YP_412561.1 82702995 3786524 complement(2160005..2161147) 1 NC_007614.1 hypothetical protein 2161147 3786524 Nmul_A1874 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412561.1 2160005 R 323848 CDS YP_412562.1 82702996 3786525 complement(2161295..2161750) 1 NC_007614.1 hypothetical protein 2161750 3786525 Nmul_A1875 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412562.1 2161295 R 323848 CDS YP_412563.1 82702997 3786526 complement(2161793..2162368) 1 NC_007614.1 hypothetical protein 2162368 3786526 Nmul_A1876 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412563.1 2161793 R 323848 CDS YP_412564.1 82702998 3786527 complement(2162476..2164239) 1 NC_007614.1 hypothetical protein 2164239 3786527 Nmul_A1877 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412564.1 2162476 R 323848 CDS YP_412565.1 82702999 3786528 complement(2164455..2165240) 1 NC_007614.1 transmembrane protein 2165240 3786528 Nmul_A1878 Nitrosospira multiformis ATCC 25196 transmembrane protein YP_412565.1 2164455 R 323848 CDS YP_412566.1 82703000 3786529 complement(2165493..2166083) 1 NC_007614.1 hypothetical protein 2166083 3786529 Nmul_A1879 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412566.1 2165493 R 323848 CDS YP_412567.1 82703001 3786530 complement(2166098..2166490) 1 NC_007614.1 hypothetical protein 2166490 3786530 Nmul_A1880 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412567.1 2166098 R 323848 CDS YP_412568.1 82703002 3786531 complement(2166601..2167995) 1 NC_007614.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2167995 cysS 3786531 cysS Nitrosospira multiformis ATCC 25196 cysteinyl-tRNA synthetase YP_412568.1 2166601 R 323848 CDS YP_412569.1 82703003 3786532 2168084..2169205 1 NC_007614.1 hypothetical protein 2169205 3786532 Nmul_A1882 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412569.1 2168084 D 323848 CDS YP_412570.1 82703004 3786533 2169202..2170443 1 NC_007614.1 ErfK/YbiS/YcfS/YnhG 2170443 3786533 Nmul_A1883 Nitrosospira multiformis ATCC 25196 ErfK/YbiS/YcfS/YnhG YP_412570.1 2169202 D 323848 CDS YP_412571.1 82703005 3786534 2170572..2171195 1 NC_007614.1 peptidylprolyl isomerase 2171195 3786534 Nmul_A1884 Nitrosospira multiformis ATCC 25196 peptidylprolyl isomerase YP_412571.1 2170572 D 323848 CDS YP_412572.1 82703006 3784257 2171197..2171691 1 NC_007614.1 peptidylprolyl isomerase 2171691 3784257 Nmul_A1885 Nitrosospira multiformis ATCC 25196 peptidylprolyl isomerase YP_412572.1 2171197 D 323848 CDS YP_412573.1 82703007 3784258 2171706..2172386 1 NC_007614.1 hypothetical protein 2172386 3784258 Nmul_A1886 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412573.1 2171706 D 323848 CDS YP_412574.1 82703008 3784259 2172473..2173297 1 NC_007614.1 peptidase M48, Ste24p 2173297 3784259 Nmul_A1887 Nitrosospira multiformis ATCC 25196 peptidase M48, Ste24p YP_412574.1 2172473 D 323848 CDS YP_412575.1 82703009 3784260 complement(2173441..2175321) 1 NC_007614.1 peptidase S8/S53 subtilisin kexin sedolisin 2175321 3784260 Nmul_A1888 Nitrosospira multiformis ATCC 25196 peptidase S8/S53 subtilisin kexin sedolisin YP_412575.1 2173441 R 323848 CDS YP_412576.1 82703010 3784261 2175909..2176580 1 NC_007614.1 hypothetical protein 2176580 3784261 Nmul_A1889 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412576.1 2175909 D 323848 CDS YP_412577.1 82703011 3784262 complement(2177001..2177672) 1 NC_007614.1 hypothetical protein 2177672 3784262 Nmul_A1890 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412577.1 2177001 R 323848 CDS YP_412578.1 82703012 3784263 complement(2177846..2179726) 1 NC_007614.1 peptidase S8/S53 subtilisin kexin sedolisin 2179726 3784263 Nmul_A1891 Nitrosospira multiformis ATCC 25196 peptidase S8/S53 subtilisin kexin sedolisin YP_412578.1 2177846 R 323848 CDS YP_412579.1 82703013 3784264 complement(2180428..2180919) 1 NC_007614.1 general secretion pathway M protein 2180919 3784264 Nmul_A1892 Nitrosospira multiformis ATCC 25196 general secretion pathway M protein YP_412579.1 2180428 R 323848 CDS YP_412580.1 82703014 3784265 complement(2180916..2182130) 1 NC_007614.1 general secretion pathway L 2182130 3784265 Nmul_A1893 Nitrosospira multiformis ATCC 25196 general secretion pathway L YP_412580.1 2180916 R 323848 CDS YP_412581.1 82703015 3784266 complement(2182169..2183083) 1 NC_007614.1 general secretion pathway protein K 2183083 3784266 Nmul_A1894 Nitrosospira multiformis ATCC 25196 general secretion pathway protein K YP_412581.1 2182169 R 323848 CDS YP_412582.1 82703016 3784267 complement(2183088..2183708) 1 NC_007614.1 general secretion pathway protein J 2183708 3784267 Nmul_A1895 Nitrosospira multiformis ATCC 25196 general secretion pathway protein J YP_412582.1 2183088 R 323848 CDS YP_412583.1 82703017 3784268 complement(2183825..2184232) 1 NC_007614.1 general secretion pathway protein I 2184232 3784268 Nmul_A1896 Nitrosospira multiformis ATCC 25196 general secretion pathway protein I YP_412583.1 2183825 R 323848 CDS YP_412584.1 82703018 3784269 complement(2184201..2184719) 1 NC_007614.1 general secretion pathway protein H 2184719 3784269 Nmul_A1897 Nitrosospira multiformis ATCC 25196 general secretion pathway protein H YP_412584.1 2184201 R 323848 CDS YP_412585.1 82703019 3784270 complement(2184734..2185237) 1 NC_007614.1 general secretion pathway protein G 2185237 3784270 Nmul_A1898 Nitrosospira multiformis ATCC 25196 general secretion pathway protein G YP_412585.1 2184734 R 323848 CDS YP_412586.1 82703020 3784271 2185619..2187457 1 NC_007614.1 multicopper oxidase type 1 2187457 3784271 Nmul_A1899 Nitrosospira multiformis ATCC 25196 multicopper oxidase type 1 YP_412586.1 2185619 D 323848 CDS YP_412587.1 82703021 3784272 complement(2187707..2188753) 1 NC_007614.1 cyanophycinase-like protein 2188753 3784272 Nmul_A1900 Nitrosospira multiformis ATCC 25196 cyanophycinase-like protein YP_412587.1 2187707 R 323848 CDS YP_412588.1 82703022 3784273 2189190..2189720 1 NC_007614.1 putative general secretion pathway related transmembrane protein 2189720 3784273 Nmul_A1901 Nitrosospira multiformis ATCC 25196 putative general secretion pathway related transmembrane protein YP_412588.1 2189190 D 323848 CDS YP_412589.1 82703023 3784274 2189733..2192102 1 NC_007614.1 type II and III secretion system protein 2192102 3784274 Nmul_A1902 Nitrosospira multiformis ATCC 25196 type II and III secretion system protein YP_412589.1 2189733 D 323848 CDS YP_412590.1 82703024 3784275 2192118..2193581 1 NC_007614.1 type II secretion system protein E 2193581 3784275 Nmul_A1903 Nitrosospira multiformis ATCC 25196 type II secretion system protein E YP_412590.1 2192118 D 323848 CDS YP_412591.1 82703025 3784142 2193591..2194796 1 NC_007614.1 general secretion pathway protein F 2194796 3784142 Nmul_A1904 Nitrosospira multiformis ATCC 25196 general secretion pathway protein F YP_412591.1 2193591 D 323848 CDS YP_412592.1 82703026 3784143 complement(2194951..2196138) 1 NC_007614.1 catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase 2196138 3784143 Nmul_A1905 Nitrosospira multiformis ATCC 25196 O-succinylhomoserine sulfhydrylase YP_412592.1 2194951 R 323848 CDS YP_412593.1 82703027 3784144 complement(2196291..2197811) 1 NC_007614.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 2197811 3784144 Nmul_A1906 Nitrosospira multiformis ATCC 25196 amidophosphoribosyltransferase YP_412593.1 2196291 R 323848 CDS YP_412594.1 82703028 3784145 complement(2197903..2198427) 1 NC_007614.1 colicin V production protein 2198427 3784145 Nmul_A1907 Nitrosospira multiformis ATCC 25196 colicin V production protein YP_412594.1 2197903 R 323848 CDS YP_412595.1 82703029 3784146 complement(2198472..2199158) 1 NC_007614.1 sporulation related 2199158 3784146 Nmul_A1908 Nitrosospira multiformis ATCC 25196 sporulation related YP_412595.1 2198472 R 323848 CDS YP_412596.1 82703030 3784147 complement(2199174..2200502) 1 NC_007614.1 FolC bifunctional protein 2200502 3784147 Nmul_A1909 Nitrosospira multiformis ATCC 25196 FolC bifunctional protein YP_412596.1 2199174 R 323848 CDS YP_412597.1 82703031 3784148 complement(2200549..2201418) 1 NC_007614.1 acetyl-CoA carboxylase, carboxyl transferase subunit beta 2201418 3784148 Nmul_A1910 Nitrosospira multiformis ATCC 25196 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_412597.1 2200549 R 323848 CDS YP_412598.1 82703032 3784149 complement(2201415..2202254) 1 NC_007614.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2202254 trpA 3784149 trpA Nitrosospira multiformis ATCC 25196 tryptophan synthase subunit alpha YP_412598.1 2201415 R 323848 CDS YP_412599.1 82703033 3784150 complement(2202271..2203467) 1 NC_007614.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2203467 3784150 Nmul_A1912 Nitrosospira multiformis ATCC 25196 tryptophan synthase subunit beta YP_412599.1 2202271 R 323848 CDS YP_412600.1 82703034 3784151 complement(2203454..2204080) 1 NC_007614.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 2204080 3784151 Nmul_A1913 Nitrosospira multiformis ATCC 25196 N-(5'-phosphoribosyl)anthranilate isomerase YP_412600.1 2203454 R 323848 CDS YP_412601.1 82703035 3784152 complement(2204065..2205120) 1 NC_007614.1 tRNA pseudouridine synthase A 2205120 3784152 Nmul_A1914 Nitrosospira multiformis ATCC 25196 tRNA pseudouridine synthase A YP_412601.1 2204065 R 323848 CDS YP_412602.1 82703036 3784153 complement(2205146..2205985) 1 NC_007614.1 transmembrane protein 2205985 3784153 Nmul_A1915 Nitrosospira multiformis ATCC 25196 transmembrane protein YP_412602.1 2205146 R 323848 CDS YP_412603.1 82703037 3784154 2206065..2206328 1 NC_007614.1 hypothetical protein 2206328 3784154 Nmul_A1916 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412603.1 2206065 D 323848 CDS YP_412604.1 82703038 3784155 complement(2206306..2207418) 1 NC_007614.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 2207418 3784155 Nmul_A1917 Nitrosospira multiformis ATCC 25196 aspartate-semialdehyde dehydrogenase YP_412604.1 2206306 R 323848 CDS YP_412605.1 82703039 3784156 complement(2207479..2208540) 1 NC_007614.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2208540 3784156 Nmul_A1918 Nitrosospira multiformis ATCC 25196 3-isopropylmalate dehydrogenase YP_412605.1 2207479 R 323848 CDS YP_412606.2 162139864 3784157 complement(2208567..2209205) 1 NC_007614.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2209205 leuD 3784157 leuD Nitrosospira multiformis ATCC 25196 isopropylmalate isomerase small subunit YP_412606.2 2208567 R 323848 CDS YP_412607.1 82703041 3784158 complement(2209226..2209351) 1 NC_007614.1 entericidin EcnAB 2209351 3784158 Nmul_A1920 Nitrosospira multiformis ATCC 25196 entericidin EcnAB YP_412607.1 2209226 R 323848 CDS YP_412608.1 82703042 3784159 complement(2209401..2210810) 1 NC_007614.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2210810 3784159 Nmul_A1921 Nitrosospira multiformis ATCC 25196 isopropylmalate isomerase large subunit YP_412608.1 2209401 R 323848 CDS YP_412609.1 82703043 3784160 complement(2210900..2212048) 1 NC_007614.1 major facilitator transporter 2212048 3784160 Nmul_A1922 Nitrosospira multiformis ATCC 25196 major facilitator transporter YP_412609.1 2210900 R 323848 CDS YP_412610.1 82703044 3784161 complement(2212225..2212776) 1 NC_007614.1 hypothetical protein 2212776 3784161 Nmul_A1923 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412610.1 2212225 R 323848 CDS YP_412611.1 82703045 3784220 2213217..2214542 1 NC_007614.1 hypothetical protein 2214542 3784220 Nmul_A1924 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412611.1 2213217 D 323848 CDS YP_412612.1 82703046 3784221 2214539..2215516 1 NC_007614.1 hypothetical protein 2215516 3784221 Nmul_A1925 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412612.1 2214539 D 323848 CDS YP_412613.1 82703047 3784222 2215683..2216432 1 NC_007614.1 integral membrane protein TerC 2216432 3784222 Nmul_A1926 Nitrosospira multiformis ATCC 25196 integral membrane protein TerC YP_412613.1 2215683 D 323848 CDS YP_412614.1 82703048 3784223 2216478..2218331 1 NC_007614.1 hypothetical protein 2218331 3784223 Nmul_A1927 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412614.1 2216478 D 323848 CDS YP_412615.1 82703049 3784224 2218522..2218905 1 NC_007614.1 hypothetical protein 2218905 3784224 Nmul_A1928 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412615.1 2218522 D 323848 CDS YP_412616.1 82703050 3784225 complement(2219320..2220000) 1 NC_007614.1 hypothetical protein 2220000 3784225 Nmul_A1929 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412616.1 2219320 R 323848 CDS YP_412617.1 82703051 3784226 2220073..2220504 1 NC_007614.1 hypothetical protein 2220504 3784226 Nmul_A1930 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412617.1 2220073 D 323848 CDS YP_412618.1 82703052 3784227 2221189..2221701 1 NC_007614.1 hypothetical protein 2221701 3784227 Nmul_A1931 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412618.1 2221189 D 323848 CDS YP_412619.1 82703053 3784228 2222910..2223542 1 NC_007614.1 TetR family transcriptional regulator 2223542 3784228 Nmul_A1932 Nitrosospira multiformis ATCC 25196 TetR family transcriptional regulator YP_412619.1 2222910 D 323848 CDS YP_412620.1 82703054 3784229 2223563..2224201 1 NC_007614.1 hypothetical protein 2224201 3784229 Nmul_A1933 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412620.1 2223563 D 323848 CDS YP_412621.1 82703055 3784230 2224224..2224391 1 NC_007614.1 ubiquinone/menaquinone biosynthesis methyltransferase 2224391 3784230 Nmul_A1934 Nitrosospira multiformis ATCC 25196 ubiquinone/menaquinone biosynthesis methyltransferase YP_412621.1 2224224 D 323848 CDS YP_412622.1 82703056 3784231 2224441..2225019 1 NC_007614.1 ubiquinone/menaquinone biosynthesis methyltransferase 2225019 3784231 Nmul_A1935 Nitrosospira multiformis ATCC 25196 ubiquinone/menaquinone biosynthesis methyltransferase YP_412622.1 2224441 D 323848 CDS YP_412623.1 82703057 3784232 complement(2225075..2227261) 1 NC_007614.1 methionyl-tRNA synthetase 2227261 3784232 Nmul_A1936 Nitrosospira multiformis ATCC 25196 methionyl-tRNA synthetase YP_412623.1 2225075 R 323848 CDS YP_412624.1 82703058 3784233 complement(2227666..2228700) 1 NC_007614.1 zinc-containing alcohol dehydrogenase superfamily protein 2228700 3784233 Nmul_A1937 Nitrosospira multiformis ATCC 25196 zinc-containing alcohol dehydrogenase superfamily protein YP_412624.1 2227666 R 323848 CDS YP_412625.1 82703059 3784234 complement(2228720..2229829) 1 NC_007614.1 galactokinase 2229829 3784234 Nmul_A1938 Nitrosospira multiformis ATCC 25196 galactokinase YP_412625.1 2228720 R 323848 CDS YP_412626.1 82703060 3784235 complement(2229927..2231009) 1 NC_007614.1 galactose-1-phosphate uridylyltransferase 2231009 3784235 Nmul_A1939 Nitrosospira multiformis ATCC 25196 galactose-1-phosphate uridylyltransferase YP_412626.1 2229927 R 323848 CDS YP_412627.1 82703061 3784236 complement(2231010..2232791) 1 NC_007614.1 glycoside hydrolase family protein 2232791 3784236 Nmul_A1940 Nitrosospira multiformis ATCC 25196 glycoside hydrolase family protein YP_412627.1 2231010 R 323848 CDS YP_412628.1 82703062 3785118 complement(2233154..2234383) 1 NC_007614.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2234383 3785118 Nmul_A1941 Nitrosospira multiformis ATCC 25196 aspartate kinase YP_412628.1 2233154 R 323848 CDS YP_412629.1 82703063 3785119 2234756..2235043 1 NC_007614.1 XRE family transcriptional regulator 2235043 3785119 Nmul_A1942 Nitrosospira multiformis ATCC 25196 XRE family transcriptional regulator YP_412629.1 2234756 D 323848 CDS YP_412630.1 82703064 3785120 complement(2235112..2235915) 1 NC_007614.1 radical SAM family protein 2235915 3785120 Nmul_A1943 Nitrosospira multiformis ATCC 25196 radical SAM family protein YP_412630.1 2235112 R 323848 CDS YP_412631.1 82703065 3785121 2235989..2236438 1 NC_007614.1 putative 6-pyruvoyl tetrahydropterin synthase 2236438 3785121 Nmul_A1944 Nitrosospira multiformis ATCC 25196 putative 6-pyruvoyl tetrahydropterin synthase YP_412631.1 2235989 D 323848 CDS YP_412632.1 82703066 3785122 2236622..2237098 1 NC_007614.1 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2237098 3785122 Nmul_A1945 Nitrosospira multiformis ATCC 25196 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_412632.1 2236622 D 323848 CDS YP_412633.1 82703067 3785123 2237088..2238539 1 NC_007614.1 PhoH-like protein 2238539 3785123 Nmul_A1946 Nitrosospira multiformis ATCC 25196 PhoH-like protein YP_412633.1 2237088 D 323848 CDS YP_412634.1 82703068 3785124 complement(2238686..2240098) 1 NC_007614.1 replicative DNA helicase 2240098 3785124 Nmul_A1947 Nitrosospira multiformis ATCC 25196 replicative DNA helicase YP_412634.1 2238686 R 323848 CDS YP_412635.1 82703069 3785125 complement(2240186..2240641) 1 NC_007614.1 50S ribosomal protein L9 2240641 3785125 Nmul_A1948 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L9 YP_412635.1 2240186 R 323848 CDS YP_412636.1 82703070 3785126 complement(2240653..2240937) 1 NC_007614.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2240937 rpsR 3785126 rpsR Nitrosospira multiformis ATCC 25196 30S ribosomal protein S18 YP_412636.1 2240653 R 323848 CDS YP_412637.1 82703071 3785127 complement(2240969..2241265) 1 NC_007614.1 primosomal replication protein N 2241265 3785127 Nmul_A1950 Nitrosospira multiformis ATCC 25196 primosomal replication protein N YP_412637.1 2240969 R 323848 CDS YP_412638.1 82703072 3785128 complement(2241278..2241655) 1 NC_007614.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2241655 rpsF 3785128 rpsF Nitrosospira multiformis ATCC 25196 30S ribosomal protein S6 YP_412638.1 2241278 R 323848 CDS YP_412639.1 82703073 3785129 complement(2241846..2242595) 1 NC_007614.1 RNA methyltransferase TrmH 2242595 3785129 Nmul_A1952 Nitrosospira multiformis ATCC 25196 RNA methyltransferase TrmH YP_412639.1 2241846 R 323848 CDS YP_412640.1 82703074 3785130 complement(2242655..2244862) 1 NC_007614.1 VacB/RNase II family 3'-5' exoribonuclease 2244862 3785130 Nmul_A1953 Nitrosospira multiformis ATCC 25196 VacB/RNase II family 3'-5' exoribonuclease YP_412640.1 2242655 R 323848 CDS YP_412641.1 82703075 3785132 2245673..2246455 1 NC_007614.1 hypothetical protein 2246455 3785132 Nmul_A1954 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412641.1 2245673 D 323848 CDS YP_412642.1 82703076 3785133 2246610..2247059 1 NC_007614.1 hypothetical protein 2247059 3785133 Nmul_A1955 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412642.1 2246610 D 323848 CDS YP_412643.1 82703077 3785134 2247040..2248287 1 NC_007614.1 hypothetical protein 2248287 3785134 Nmul_A1956 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412643.1 2247040 D 323848 CDS YP_412644.1 82703078 3785135 2248290..2251217 1 NC_007614.1 diguanylate cyclase/phosphodiesterase 2251217 3785135 Nmul_A1957 Nitrosospira multiformis ATCC 25196 diguanylate cyclase/phosphodiesterase YP_412644.1 2248290 D 323848 CDS YP_412645.1 82703079 3785136 complement(2251312..2252493) 1 NC_007614.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2252493 3785136 Nmul_A1958 Nitrosospira multiformis ATCC 25196 chorismate synthase YP_412645.1 2251312 R 323848 CDS YP_412646.1 82703080 3784982 2252646..2253647 1 NC_007614.1 zinc-containing alcohol dehydrogenase superfamily protein 2253647 3784982 Nmul_A1959 Nitrosospira multiformis ATCC 25196 zinc-containing alcohol dehydrogenase superfamily protein YP_412646.1 2252646 D 323848 CDS YP_412647.1 82703081 3784983 complement(2253733..2254827) 1 NC_007614.1 ADP-ribosylation/crystallin J1 2254827 3784983 Nmul_A1960 Nitrosospira multiformis ATCC 25196 ADP-ribosylation/crystallin J1 YP_412647.1 2253733 R 323848 CDS YP_412648.1 82703082 3784984 complement(2255027..2256511) 1 NC_007614.1 leucyl aminopeptidase 2256511 3784984 Nmul_A1961 Nitrosospira multiformis ATCC 25196 leucyl aminopeptidase YP_412648.1 2255027 R 323848 CDS YP_412649.2 162139863 3784985 2256598..2257392 1 NC_007614.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2257392 thyA 3784985 thyA Nitrosospira multiformis ATCC 25196 thymidylate synthase YP_412649.2 2256598 D 323848 CDS YP_412650.1 82703084 3784986 2257389..2257940 1 NC_007614.1 dihydrofolate reductase 2257940 3784986 Nmul_A1963 Nitrosospira multiformis ATCC 25196 dihydrofolate reductase YP_412650.1 2257389 D 323848 CDS YP_412651.1 82703085 3784987 complement(2258107..2259282) 1 NC_007614.1 Orn/DAP/Arg decarboxylase 2 2259282 3784987 Nmul_A1964 Nitrosospira multiformis ATCC 25196 Orn/DAP/Arg decarboxylase 2 YP_412651.1 2258107 R 323848 CDS YP_412652.1 82703086 3784988 complement(2259792..2260361) 1 NC_007614.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 2260361 dcd 3784988 dcd Nitrosospira multiformis ATCC 25196 deoxycytidine triphosphate deaminase YP_412652.1 2259792 R 323848 CDS YP_412653.1 82703087 3784989 complement(2260467..2261555) 1 NC_007614.1 hypothetical protein 2261555 3784989 Nmul_A1966 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412653.1 2260467 R 323848 CDS YP_412654.1 82703088 3784991 2262548..2263156 1 NC_007614.1 TetR family transcriptional regulator 2263156 3784991 Nmul_A1967 Nitrosospira multiformis ATCC 25196 TetR family transcriptional regulator YP_412654.1 2262548 D 323848 CDS YP_412655.1 82703089 3784992 2263220..2263498 1 NC_007614.1 hypothetical protein 2263498 3784992 Nmul_A1968 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412655.1 2263220 D 323848 CDS YP_412656.1 82703090 3784993 2263566..2265311 1 NC_007614.1 hypothetical protein 2265311 3784993 Nmul_A1969 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412656.1 2263566 D 323848 CDS YP_412657.1 82703091 3784994 complement(2265630..2268719) 1 NC_007614.1 acriflavin resistance protein 2268719 3784994 Nmul_A1970 Nitrosospira multiformis ATCC 25196 acriflavin resistance protein YP_412657.1 2265630 R 323848 CDS YP_412658.1 82703092 3784995 complement(2268771..2269859) 1 NC_007614.1 secretion protein HlyD 2269859 3784995 Nmul_A1971 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_412658.1 2268771 R 323848 CDS YP_412659.1 82703093 3784996 complement(2270083..2270769) 1 NC_007614.1 ABC transporter-like protein 2270769 3784996 Nmul_A1972 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412659.1 2270083 R 323848 CDS YP_412660.1 82703094 3784997 2270834..2271460 1 NC_007614.1 arylesterase 2271460 3784997 Nmul_A1973 Nitrosospira multiformis ATCC 25196 arylesterase YP_412660.1 2270834 D 323848 CDS YP_412661.1 82703095 3784998 2271613..2272113 1 NC_007614.1 hypothetical protein 2272113 3784998 Nmul_A1974 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412661.1 2271613 D 323848 CDS YP_412662.1 82703096 3784999 complement(2272172..2272972) 1 NC_007614.1 TPR repeat-containing protein 2272972 3784999 Nmul_A1975 Nitrosospira multiformis ATCC 25196 TPR repeat-containing protein YP_412662.1 2272172 R 323848 CDS YP_412663.1 82703097 3785000 2273070..2274026 1 NC_007614.1 pseudouridine synthase RluD 2274026 3785000 Nmul_A1976 Nitrosospira multiformis ATCC 25196 pseudouridine synthase RluD YP_412663.1 2273070 D 323848 CDS YP_412664.1 82703098 3785001 2274023..2274757 1 NC_007614.1 hypothetical protein 2274757 3785001 Nmul_A1977 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412664.1 2274023 D 323848 CDS YP_412665.1 82703099 3785002 2274898..2275695 1 NC_007614.1 Zinc transporter ZIP 2275695 3785002 Nmul_A1978 Nitrosospira multiformis ATCC 25196 Zinc transporter ZIP YP_412665.1 2274898 D 323848 CDS YP_412666.1 82703100 3785003 2275847..2277193 1 NC_007614.1 hypothetical protein 2277193 3785003 Nmul_A1979 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412666.1 2275847 D 323848 CDS YP_412667.1 82703101 3785004 2277329..2277817 1 NC_007614.1 hypothetical protein 2277817 3785004 Nmul_A1980 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412667.1 2277329 D 323848 CDS YP_412668.1 82703102 3785005 2279002..2280138 1 NC_007614.1 hypothetical protein 2280138 3785005 Nmul_A1981 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412668.1 2279002 D 323848 CDS YP_412669.1 82703103 3785006 2280151..2280930 1 NC_007614.1 ABC transporter-like protein 2280930 3785006 Nmul_A1982 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412669.1 2280151 D 323848 CDS YP_412670.1 82703104 3785007 2280940..2281845 1 NC_007614.1 hypothetical protein 2281845 3785007 Nmul_A1983 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412670.1 2280940 D 323848 CDS YP_412671.1 82703105 3785008 2281847..2282500 1 NC_007614.1 putative lipoprotein 2282500 3785008 Nmul_A1984 Nitrosospira multiformis ATCC 25196 putative lipoprotein YP_412671.1 2281847 D 323848 CDS YP_412672.1 82703106 3785009 2282781..2283824 1 NC_007614.1 hypothetical protein 2283824 3785009 Nmul_A1985 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412672.1 2282781 D 323848 CDS YP_412673.1 82703107 3785010 complement(2283844..2284524) 1 NC_007614.1 hypothetical protein 2284524 3785010 Nmul_A1986 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412673.1 2283844 R 323848 CDS YP_412674.1 82703108 3785011 complement(2284599..2285549) 1 NC_007614.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2285549 3785011 Nmul_A1987 Nitrosospira multiformis ATCC 25196 lipoyl synthase YP_412674.1 2284599 R 323848 CDS YP_412675.1 82703109 3785012 complement(2285638..2286285) 1 NC_007614.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 2286285 lipB 3785012 lipB Nitrosospira multiformis ATCC 25196 lipoate-protein ligase B YP_412675.1 2285638 R 323848 CDS YP_412676.1 82703110 3785013 complement(2286331..2286660) 1 NC_007614.1 hypothetical protein 2286660 3785013 Nmul_A1989 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412676.1 2286331 R 323848 CDS YP_412677.1 82703111 3785014 complement(2286666..2287526) 1 NC_007614.1 class IV aminotransferase 2287526 3785014 Nmul_A1990 Nitrosospira multiformis ATCC 25196 class IV aminotransferase YP_412677.1 2286666 R 323848 CDS YP_412678.1 82703112 3785015 complement(2287557..2288771) 1 NC_007614.1 Serine-type D-Ala-D-Ala carboxypeptidase 2288771 3785015 Nmul_A1991 Nitrosospira multiformis ATCC 25196 Serine-type D-Ala-D-Ala carboxypeptidase YP_412678.1 2287557 R 323848 CDS YP_412679.1 82703113 3785016 complement(2288858..2289283) 1 NC_007614.1 hypothetical protein 2289283 3785016 Nmul_A1992 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412679.1 2288858 R 323848 CDS YP_412680.1 82703114 3785017 complement(2289280..2290806) 1 NC_007614.1 hypothetical protein 2290806 3785017 Nmul_A1993 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412680.1 2289280 R 323848 CDS YP_412681.1 82703115 3785018 complement(2290882..2291793) 1 NC_007614.1 catalyzes the formation of adenosylcobinamide-phosphate from adenosylcobyric acid; CobD/CbiB family protein 2291793 3785018 Nmul_A1994 Nitrosospira multiformis ATCC 25196 CobD/CbiB family protein YP_412681.1 2290882 R 323848 CDS YP_412682.1 82703116 3785019 complement(2291847..2292725) 1 NC_007614.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 2292725 3785019 Nmul_A1995 Nitrosospira multiformis ATCC 25196 succinyl-CoA synthetase subunit alpha YP_412682.1 2291847 R 323848 CDS YP_412683.1 82703117 3784487 complement(2292754..2293950) 1 NC_007614.1 succinyl-CoA synthetase subunit beta 2293950 3784487 Nmul_A1996 Nitrosospira multiformis ATCC 25196 succinyl-CoA synthetase subunit beta YP_412683.1 2292754 R 323848 CDS YP_412684.1 82703118 3784488 complement(2294135..2294869) 1 NC_007614.1 protein serine/threonine phosphatase 2294869 3784488 Nmul_A1997 Nitrosospira multiformis ATCC 25196 protein serine/threonine phosphatase YP_412684.1 2294135 R 323848 CDS YP_412685.1 82703119 3784489 2295049..2296404 1 NC_007614.1 nitrite reductase (NO-forming) 2296404 3784489 Nmul_A1998 Nitrosospira multiformis ATCC 25196 nitrite reductase (NO-forming) YP_412685.1 2295049 D 323848 CDS YP_412686.1 82703120 3784490 complement(2296463..2296732) 1 NC_007614.1 hypothetical protein 2296732 3784490 Nmul_A1999 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412686.1 2296463 R 323848 CDS YP_412687.1 82703121 3784491 2297119..2297373 1 NC_007614.1 hypothetical protein 2297373 3784491 Nmul_A2000 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412687.1 2297119 D 323848 CDS YP_412688.1 82703122 3784492 2299331..2300719 1 NC_007614.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2300719 3784492 Nmul_A2001 Nitrosospira multiformis ATCC 25196 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_412688.1 2299331 D 323848 CDS YP_412689.1 82703123 3784493 2300907..2302298 1 NC_007614.1 DNA polymerase III subunit epsilon 2302298 3784493 Nmul_A2002 Nitrosospira multiformis ATCC 25196 DNA polymerase III subunit epsilon YP_412689.1 2300907 D 323848 CDS YP_412690.1 82703124 3784494 complement(2302751..2303434) 1 NC_007614.1 nuclease 2303434 3784494 Nmul_A2003 Nitrosospira multiformis ATCC 25196 nuclease YP_412690.1 2302751 R 323848 CDS YP_412691.1 82703125 3784495 complement(2303421..2303708) 1 NC_007614.1 hypothetical protein 2303708 3784495 Nmul_A2004 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412691.1 2303421 R 323848 CDS YP_412692.1 82703126 3784496 complement(2303776..2306037) 1 NC_007614.1 heavy metal translocating P-type ATPase 2306037 3784496 Nmul_A2005 Nitrosospira multiformis ATCC 25196 heavy metal translocating P-type ATPase YP_412692.1 2303776 R 323848 CDS YP_412693.1 82703127 3784497 2306120..2306404 1 NC_007614.1 hypothetical protein 2306404 3784497 Nmul_A2006 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412693.1 2306120 D 323848 CDS YP_412694.1 82703128 3784498 2306973..2307164 1 NC_007614.1 hypothetical protein 2307164 3784498 Nmul_A2007 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412694.1 2306973 D 323848 CDS YP_412695.1 82703129 3784499 complement(2307292..2308578) 1 NC_007614.1 hypothetical protein 2308578 3784499 Nmul_A2008 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412695.1 2307292 R 323848 CDS YP_412696.1 82703130 3784500 complement(2309032..2309304) 1 NC_007614.1 putative transposase 2309304 3784500 Nmul_A2009 Nitrosospira multiformis ATCC 25196 putative transposase YP_412696.1 2309032 R 323848 CDS YP_412697.1 82703131 3784501 complement(2309327..2309875) 1 NC_007614.1 putative transposase 2309875 3784501 Nmul_A2010 Nitrosospira multiformis ATCC 25196 putative transposase YP_412697.1 2309327 R 323848 CDS YP_412698.1 82703132 3784502 complement(2309857..2310135) 1 NC_007614.1 transposase IS3/IS911 2310135 3784502 Nmul_A2011 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412698.1 2309857 R 323848 CDS YP_412699.1 82703133 3784503 complement(2310763..2311752) 1 NC_007614.1 Phage integrase 2311752 3784503 Nmul_A2012 Nitrosospira multiformis ATCC 25196 Phage integrase YP_412699.1 2310763 R 323848 CDS YP_412700.1 82703134 3784504 complement(2312042..2312329) 1 NC_007614.1 CopG family transcriptional regulator 2312329 3784504 Nmul_A2013 Nitrosospira multiformis ATCC 25196 CopG family transcriptional regulator YP_412700.1 2312042 R 323848 CDS YP_412701.1 82703135 3784505 complement(2312579..2312986) 1 NC_007614.1 glyoxalase/bleomycin resistance protein/dioxygenase 2312986 3784505 Nmul_A2014 Nitrosospira multiformis ATCC 25196 glyoxalase/bleomycin resistance protein/dioxygenase YP_412701.1 2312579 R 323848 CDS YP_412702.1 82703136 3784565 complement(2313198..2314814) 1 NC_007614.1 PAS/PAC sensor signal transduction histidine kinase 2314814 3784565 Nmul_A2015 Nitrosospira multiformis ATCC 25196 PAS/PAC sensor signal transduction histidine kinase YP_412702.1 2313198 R 323848 CDS YP_412703.1 82703137 3784566 2315213..2315692 1 NC_007614.1 hypothetical protein 2315692 3784566 Nmul_A2016 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412703.1 2315213 D 323848 CDS YP_412704.1 82703138 3784567 2315733..2316035 1 NC_007614.1 hypothetical protein 2316035 3784567 Nmul_A2017 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412704.1 2315733 D 323848 CDS YP_412705.1 82703139 3784568 2316043..2316444 1 NC_007614.1 IS298, transposase OrfA 2316444 3784568 Nmul_A2018 Nitrosospira multiformis ATCC 25196 IS298, transposase OrfA YP_412705.1 2316043 D 323848 CDS YP_412706.1 82703140 3784569 2316294..2316827 1 NC_007614.1 transposase IS4 2316827 3784569 Nmul_A2019 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_412706.1 2316294 D 323848 CDS YP_412707.1 82703141 3784570 2316954..2317736 1 NC_007614.1 hypothetical protein 2317736 3784570 Nmul_A2020 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412707.1 2316954 D 323848 CDS YP_412708.1 82703142 3784571 complement(2318130..2318951) 1 NC_007614.1 integrase catalytic subunit 2318951 3784571 Nmul_A2021 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412708.1 2318130 R 323848 CDS YP_412709.1 82703143 3784572 complement(2318945..2319211) 1 NC_007614.1 transposase IS3/IS911 2319211 3784572 Nmul_A2022 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412709.1 2318945 R 323848 CDS YP_412710.1 82703144 3784573 complement(2319475..2319711) 1 NC_007614.1 resolvase helix-turn-helix region 2319711 3784573 Nmul_A2023 Nitrosospira multiformis ATCC 25196 resolvase helix-turn-helix region YP_412710.1 2319475 R 323848 CDS YP_412711.1 82703145 3784574 complement(2320059..2320907) 1 NC_007614.1 integrase catalytic subunit 2320907 3784574 Nmul_A2024 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412711.1 2320059 R 323848 CDS YP_412712.1 82703146 3784575 complement(2320904..2321311) 1 NC_007614.1 transposase IS3/IS911 2321311 3784575 Nmul_A2025 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412712.1 2320904 R 323848 CDS YP_412713.1 82703147 3784576 2321684..2322382 1 NC_007614.1 hypothetical protein 2322382 3784576 Nmul_A2026 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412713.1 2321684 D 323848 CDS YP_412714.1 82703148 3784577 complement(2322553..2322900) 1 NC_007614.1 transposase IS4 2322900 3784577 Nmul_A2027 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_412714.1 2322553 R 323848 CDS YP_412715.1 82703149 3784578 complement(2322942..2323310) 1 NC_007614.1 transposase 2323310 3784578 Nmul_A2028 Nitrosospira multiformis ATCC 25196 transposase YP_412715.1 2322942 R 323848 CDS YP_412716.1 82703150 3784579 complement(2323347..2324057) 1 NC_007614.1 hypothetical protein 2324057 3784579 Nmul_A2029 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412716.1 2323347 R 323848 CDS YP_412717.1 82703151 3784580 2324167..2324595 1 NC_007614.1 hypothetical protein 2324595 3784580 Nmul_A2030 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412717.1 2324167 D 323848 CDS YP_412718.1 82703152 3784581 complement(2325158..2325697) 1 NC_007614.1 hypothetical protein 2325697 3784581 Nmul_A2031 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412718.1 2325158 R 323848 CDS YP_412719.1 82703153 3784582 2327271..2328368 1 NC_007614.1 thiosulfate-binding protein 2328368 3784582 Nmul_A2032 Nitrosospira multiformis ATCC 25196 thiosulfate-binding protein YP_412719.1 2327271 D 323848 CDS YP_412720.1 82703154 3784584 2329094..2329369 1 NC_007614.1 RelB antitoxin 2329369 3784584 Nmul_A2034 Nitrosospira multiformis ATCC 25196 RelB antitoxin YP_412720.1 2329094 D 323848 CDS YP_412721.1 82703155 3786725 2329356..2329637 1 NC_007614.1 hypothetical protein 2329637 3786725 Nmul_A2035 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412721.1 2329356 D 323848 CDS YP_412722.1 82703156 3786726 2330518..2331285 1 NC_007614.1 Crp/FNR family transcriptional regulator 2331285 3786726 Nmul_A2036 Nitrosospira multiformis ATCC 25196 Crp/FNR family transcriptional regulator YP_412722.1 2330518 D 323848 CDS YP_412723.1 82703157 3786727 2331471..2331938 1 NC_007614.1 response regulator receiver domain-containing protein 2331938 3786727 Nmul_A2037 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_412723.1 2331471 D 323848 CDS YP_412724.1 82703158 3786728 complement(2332762..2333505) 1 NC_007614.1 hypothetical protein 2333505 3786728 Nmul_A2038 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412724.1 2332762 R 323848 CDS YP_412725.1 82703159 3786729 2333764..2335062 1 NC_007614.1 diguanylate cyclase 2335062 3786729 Nmul_A2039 Nitrosospira multiformis ATCC 25196 diguanylate cyclase YP_412725.1 2333764 D 323848 CDS YP_412726.1 82703160 3786730 2335314..2335553 1 NC_007614.1 DNA polymerase V 2335553 3786730 Nmul_A2040 Nitrosospira multiformis ATCC 25196 DNA polymerase V YP_412726.1 2335314 D 323848 CDS YP_412727.2 162139862 3786731 complement(2335622..2336443) 1 NC_007614.1 hypothetical protein 2336443 3786731 Nmul_A2041 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412727.2 2335622 R 323848 CDS YP_412728.1 82703162 3786732 2336541..2336804 1 NC_007614.1 hypothetical protein 2336804 3786732 Nmul_A2042 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412728.1 2336541 D 323848 CDS YP_412729.1 82703163 3786733 complement(2337095..2337718) 1 NC_007614.1 hypothetical protein 2337718 3786733 Nmul_A2043 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412729.1 2337095 R 323848 CDS YP_412730.1 82703164 3786734 complement(2337731..2338357) 1 NC_007614.1 hypothetical protein 2338357 3786734 Nmul_A2044 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412730.1 2337731 R 323848 CDS YP_412731.1 82703165 3786735 2338377..2338664 1 NC_007614.1 hypothetical protein 2338664 3786735 Nmul_A2045 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412731.1 2338377 D 323848 CDS YP_412732.1 82703166 3786736 complement(2338567..2338974) 1 NC_007614.1 hypothetical protein 2338974 3786736 Nmul_A2046 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412732.1 2338567 R 323848 CDS YP_412733.1 82703167 3786737 complement(2339446..2340429) 1 NC_007614.1 hypothetical protein 2340429 3786737 Nmul_A2047 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412733.1 2339446 R 323848 CDS YP_412734.1 82703168 3786738 complement(2340482..2341465) 1 NC_007614.1 glycoside hydrolase family protein 2341465 3786738 Nmul_A2048 Nitrosospira multiformis ATCC 25196 glycoside hydrolase family protein YP_412734.1 2340482 R 323848 CDS YP_412735.1 82703169 3786739 complement(2341471..2343996) 1 NC_007614.1 hypothetical protein 2343996 3786739 Nmul_A2049 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412735.1 2341471 R 323848 CDS YP_412736.1 82703170 3786740 complement(2343993..2344298) 1 NC_007614.1 hypothetical protein 2344298 3786740 Nmul_A2050 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412736.1 2343993 R 323848 CDS YP_412737.1 82703171 3786741 2344779..2345204 1 NC_007614.1 hypothetical protein 2345204 3786741 Nmul_A2051 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412737.1 2344779 D 323848 CDS YP_412738.1 82703172 3786742 2345330..2346196 1 NC_007614.1 hypothetical protein 2346196 3786742 Nmul_A2052 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412738.1 2345330 D 323848 CDS YP_412739.1 82703173 3786743 complement(2346605..2346892) 1 NC_007614.1 hypothetical protein 2346892 3786743 Nmul_A2053 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412739.1 2346605 R 323848 CDS YP_412740.1 82703174 3784371 complement(2347120..2347392) 1 NC_007614.1 putative transposase 2347392 3784371 Nmul_A2054 Nitrosospira multiformis ATCC 25196 putative transposase YP_412740.1 2347120 R 323848 CDS YP_412741.1 82703175 3784372 complement(2347415..2347963) 1 NC_007614.1 putative transposase 2347963 3784372 Nmul_A2055 Nitrosospira multiformis ATCC 25196 putative transposase YP_412741.1 2347415 R 323848 CDS YP_412742.1 82703176 3784373 complement(2347945..2348223) 1 NC_007614.1 transposase IS3/IS911 2348223 3784373 Nmul_A2056 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412742.1 2347945 R 323848 CDS YP_412743.1 82703177 3784375 complement(2348764..2350887) 1 NC_007614.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 2350887 3784375 Nmul_A2057 Nitrosospira multiformis ATCC 25196 RNA polymerase sigma factor RpoD YP_412743.1 2348764 R 323848 CDS YP_412744.1 82703178 3784376 complement(2351070..2352848) 1 NC_007614.1 DNA primase 2352848 3784376 Nmul_A2058 Nitrosospira multiformis ATCC 25196 DNA primase YP_412744.1 2351070 R 323848 CDS YP_412745.1 82703179 3784377 complement(2352990..2353436) 1 NC_007614.1 hypothetical protein 2353436 3784377 Nmul_A2059 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412745.1 2352990 R 323848 CDS YP_412746.1 82703180 3784378 complement(2353501..2353713) 1 NC_007614.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2353713 rpsU 3784378 rpsU Nitrosospira multiformis ATCC 25196 30S ribosomal protein S21 YP_412746.1 2353501 R 323848 CDS YP_412747.1 82703181 3784379 2353857..2354900 1 NC_007614.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 2354900 3784379 Nmul_A2061 Nitrosospira multiformis ATCC 25196 putative DNA-binding/iron metalloprotein/AP endonuclease YP_412747.1 2353857 D 323848 CDS YP_412748.1 82703182 3784380 complement(2354969..2355577) 1 NC_007614.1 hypothetical protein 2355577 3784380 Nmul_A2062 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412748.1 2354969 R 323848 CDS YP_412749.1 82703183 3784381 2355699..2356058 1 NC_007614.1 dihydroneopterin aldolase 2356058 3784381 Nmul_A2063 Nitrosospira multiformis ATCC 25196 dihydroneopterin aldolase YP_412749.1 2355699 D 323848 CDS YP_412750.1 82703184 3784382 complement(2356256..2356843) 1 NC_007614.1 hypothetical protein 2356843 3784382 Nmul_A2064 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412750.1 2356256 R 323848 CDS YP_412751.1 82703185 3784383 2357204..2357482 1 NC_007614.1 hypothetical protein 2357482 3784383 Nmul_A2065 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412751.1 2357204 D 323848 CDS YP_412752.1 82703186 3784384 complement(2357547..2358266) 1 NC_007614.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2358266 3784384 Nmul_A2066 Nitrosospira multiformis ATCC 25196 orotidine 5'-phosphate decarboxylase YP_412752.1 2357547 R 323848 CDS YP_412753.1 82703187 3784385 complement(2358311..2358685) 1 NC_007614.1 hypothetical protein 2358685 3784385 Nmul_A2067 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412753.1 2358311 R 323848 CDS YP_412754.1 82703188 3784386 complement(2358748..2359032) 1 NC_007614.1 integration host factor subunit beta 2359032 3784386 Nmul_A2068 Nitrosospira multiformis ATCC 25196 integration host factor subunit beta YP_412754.1 2358748 R 323848 CDS YP_412755.1 82703189 3784387 complement(2359041..2360756) 1 NC_007614.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2360756 rpsA 3784387 rpsA Nitrosospira multiformis ATCC 25196 30S ribosomal protein S1 YP_412755.1 2359041 R 323848 CDS YP_412756.1 82703190 3784388 complement(2361123..2361812) 1 NC_007614.1 cytidylate kinase 2361812 3784388 Nmul_A2070 Nitrosospira multiformis ATCC 25196 cytidylate kinase YP_412756.1 2361123 R 323848 CDS YP_412757.2 229137829 3784389 complement(2361809..2363173) 1 NC_007614.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2363173 3784389 Nmul_A2071 Nitrosospira multiformis ATCC 25196 3-phosphoshikimate 1-carboxyvinyltransferase YP_412757.2 2361809 R 323848 CDS YP_412758.1 82703192 3786076 2363366..2364319 1 NC_007614.1 cysteine synthase A 2364319 3786076 Nmul_A2072 Nitrosospira multiformis ATCC 25196 cysteine synthase A YP_412758.1 2363366 D 323848 CDS YP_412759.1 82703193 3786077 2364372..2365289 1 NC_007614.1 Serine O-acetyltransferase 2365289 3786077 Nmul_A2073 Nitrosospira multiformis ATCC 25196 Serine O-acetyltransferase YP_412759.1 2364372 D 323848 CDS YP_412760.1 82703194 3786078 2365467..2366354 1 NC_007614.1 Sel1 repeat-containing protein 2366354 3786078 Nmul_A2074 Nitrosospira multiformis ATCC 25196 Sel1 repeat-containing protein YP_412760.1 2365467 D 323848 CDS YP_412761.1 82703195 3786079 2366439..2367941 1 NC_007614.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 2367941 3786079 Nmul_A2075 Nitrosospira multiformis ATCC 25196 dihydrolipoamide dehydrogenase YP_412761.1 2366439 D 323848 CDS YP_412762.1 82703196 3786080 2368113..2368595 1 NC_007614.1 hypothetical protein 2368595 3786080 Nmul_A2076 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412762.1 2368113 D 323848 CDS YP_412763.1 82703197 3786081 2368598..2368987 1 NC_007614.1 invasion gene expression up-regulator SirB 2368987 3786081 Nmul_A2077 Nitrosospira multiformis ATCC 25196 invasion gene expression up-regulator SirB YP_412763.1 2368598 D 323848 CDS YP_412764.1 82703198 3786082 2369142..2371475 1 NC_007614.1 penicillin-binding protein 1A 2371475 3786082 Nmul_A2078 Nitrosospira multiformis ATCC 25196 penicillin-binding protein 1A YP_412764.1 2369142 D 323848 CDS YP_412765.1 82703199 3786083 complement(2371545..2372549) 1 NC_007614.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2372549 3786083 Nmul_A2079 Nitrosospira multiformis ATCC 25196 delta-aminolevulinic acid dehydratase YP_412765.1 2371545 R 323848 CDS YP_412766.1 82703200 3786084 complement(2372709..2373416) 1 NC_007614.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 2373416 engB 3786084 engB Nitrosospira multiformis ATCC 25196 ribosome biogenesis GTP-binding protein YsxC YP_412766.1 2372709 R 323848 CDS YP_412767.1 82703201 3786085 complement(2373450..2374238) 1 NC_007614.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 2374238 3786085 Nmul_A2081 Nitrosospira multiformis ATCC 25196 pantothenate kinase YP_412767.1 2373450 R 323848 CDS YP_412768.1 82703202 3786086 complement(2374239..2375228) 1 NC_007614.1 biotin--acetyl-CoA-carboxylase ligase 2375228 3786086 Nmul_A2082 Nitrosospira multiformis ATCC 25196 biotin--acetyl-CoA-carboxylase ligase YP_412768.1 2374239 R 323848 CDS YP_412769.2 162139861 3786087 2375469..2377166 1 NC_007614.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2377166 3786087 Nmul_A2083 Nitrosospira multiformis ATCC 25196 glutaminyl-tRNA synthetase YP_412769.2 2375469 D 323848 CDS YP_412770.1 82703204 3786088 2377495..2377818 1 NC_007614.1 thioredoxin 2377818 3786088 Nmul_A2084 Nitrosospira multiformis ATCC 25196 thioredoxin YP_412770.1 2377495 D 323848 CDS YP_412771.1 82703205 3786089 2377975..2379234 1 NC_007614.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2379234 rho 3786089 rho Nitrosospira multiformis ATCC 25196 transcription termination factor Rho YP_412771.1 2377975 D 323848 CDS YP_412772.1 82703206 3786090 2379376..2379603 1 NC_007614.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2379603 rpmE 3786090 rpmE Nitrosospira multiformis ATCC 25196 50S ribosomal protein L31 YP_412772.1 2379376 D 323848 CDS YP_412773.1 82703207 3786091 2380050..2381135 1 NC_007614.1 hypothetical protein 2381135 3786091 Nmul_A2087 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412773.1 2380050 D 323848 CDS YP_412774.1 82703208 3786093 complement(2381707..2382153) 1 NC_007614.1 glyoxalase/bleomycin resistance protein/dioxygenase 2382153 3786093 Nmul_A2089 Nitrosospira multiformis ATCC 25196 glyoxalase/bleomycin resistance protein/dioxygenase YP_412774.1 2381707 R 323848 CDS YP_412775.1 82703209 3786094 complement(2382279..2383010) 1 NC_007614.1 hypothetical protein 2383010 3786094 Nmul_A2090 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412775.1 2382279 R 323848 CDS YP_412776.1 82703210 3784662 complement(2383063..2383725) 1 NC_007614.1 glycerophosphoryl diester phosphodiesterase 2383725 3784662 Nmul_A2091 Nitrosospira multiformis ATCC 25196 glycerophosphoryl diester phosphodiesterase YP_412776.1 2383063 R 323848 CDS YP_412777.1 82703211 3784663 complement(2383728..2384555) 1 NC_007614.1 hypothetical protein 2384555 3784663 Nmul_A2092 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412777.1 2383728 R 323848 CDS YP_412778.1 82703212 3784664 2384635..2385183 1 NC_007614.1 inorganic diphosphatase 2385183 3784664 Nmul_A2093 Nitrosospira multiformis ATCC 25196 inorganic diphosphatase YP_412778.1 2384635 D 323848 CDS YP_412779.1 82703213 3784665 2385245..2385853 1 NC_007614.1 GCN5-like N-acetyltransferase 2385853 3784665 Nmul_A2094 Nitrosospira multiformis ATCC 25196 GCN5-like N-acetyltransferase YP_412779.1 2385245 D 323848 CDS YP_412780.1 82703214 3784666 2385995..2386732 1 NC_007614.1 intradiol ring-cleavage dioxygenase 2386732 3784666 Nmul_A2095 Nitrosospira multiformis ATCC 25196 intradiol ring-cleavage dioxygenase YP_412780.1 2385995 D 323848 CDS YP_412781.1 82703215 3784667 complement(2386852..2387895) 1 NC_007614.1 integrase catalytic subunit 2387895 3784667 Nmul_A2096 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412781.1 2386852 R 323848 CDS YP_412782.1 82703216 3784668 complement(2388014..2390386) 1 NC_007614.1 ATP-dependent protease La 2390386 3784668 Nmul_A2097 Nitrosospira multiformis ATCC 25196 ATP-dependent protease La YP_412782.1 2388014 R 323848 CDS YP_412783.1 82703217 3784669 complement(2390849..2391892) 1 NC_007614.1 integrase catalytic subunit 2391892 3784669 Nmul_A2098 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412783.1 2390849 R 323848 CDS YP_412784.1 82703218 3784670 2391925..2392320 1 NC_007614.1 hypothetical protein 2392320 3784670 Nmul_A2099 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412784.1 2391925 D 323848 CDS YP_412785.1 82703219 3784671 2392410..2392769 1 NC_007614.1 hypothetical protein 2392769 3784671 Nmul_A2100 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412785.1 2392410 D 323848 CDS YP_412786.1 82703220 3784672 2392833..2393411 1 NC_007614.1 hypothetical protein 2393411 3784672 Nmul_A2101 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412786.1 2392833 D 323848 CDS YP_412787.1 82703221 3784673 2393440..2393607 1 NC_007614.1 hypothetical protein 2393607 3784673 Nmul_A2102 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412787.1 2393440 D 323848 CDS YP_412788.1 82703222 3784674 2393683..2394951 1 NC_007614.1 major facilitator transporter 2394951 3784674 Nmul_A2103 Nitrosospira multiformis ATCC 25196 major facilitator transporter YP_412788.1 2393683 D 323848 CDS YP_412789.1 82703223 3784675 complement(2395305..2397989) 1 NC_007614.1 hypothetical protein 2397989 3784675 Nmul_A2104 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412789.1 2395305 R 323848 CDS YP_412790.1 82703224 3784676 2398378..2398758 1 NC_007614.1 hypothetical protein 2398758 3784676 Nmul_A2105 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412790.1 2398378 D 323848 CDS YP_412791.1 82703225 3784677 2399177..2400592 1 NC_007614.1 Outer membrane efflux protein 2400592 3784677 Nmul_A2106 Nitrosospira multiformis ATCC 25196 Outer membrane efflux protein YP_412791.1 2399177 D 323848 CDS YP_412792.1 82703226 3784678 2400595..2402124 1 NC_007614.1 secretion protein HlyD 2402124 3784678 Nmul_A2107 Nitrosospira multiformis ATCC 25196 secretion protein HlyD YP_412792.1 2400595 D 323848 CDS YP_412793.1 82703227 3784679 2402184..2405360 1 NC_007614.1 heavy metal efflux pump CzcA 2405360 3784679 Nmul_A2108 Nitrosospira multiformis ATCC 25196 heavy metal efflux pump CzcA YP_412793.1 2402184 D 323848 CDS YP_412794.1 82703228 3784680 2406689..2407903 1 NC_007614.1 hypothetical protein 2407903 3784680 Nmul_A2109 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412794.1 2406689 D 323848 CDS YP_412795.1 82703229 3784681 2407955..2408365 1 NC_007614.1 protein-methionine-S-oxide reductase 2408365 3784681 Nmul_A2110 Nitrosospira multiformis ATCC 25196 protein-methionine-S-oxide reductase YP_412795.1 2407955 D 323848 CDS YP_412796.1 82703230 3786649 2408531..2409076 1 NC_007614.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2409076 3786649 Nmul_A2111 Nitrosospira multiformis ATCC 25196 intracellular septation protein A YP_412796.1 2408531 D 323848 CDS YP_412797.1 82703231 3786650 2409073..2409378 1 NC_007614.1 YCII-like protein 2409378 3786650 Nmul_A2112 Nitrosospira multiformis ATCC 25196 YCII-like protein YP_412797.1 2409073 D 323848 CDS YP_412798.1 82703232 3786651 2409395..2409670 1 NC_007614.1 BolA-like protein 2409670 3786651 Nmul_A2113 Nitrosospira multiformis ATCC 25196 BolA-like protein YP_412798.1 2409395 D 323848 CDS YP_412799.1 82703233 3786652 2409683..2410480 1 NC_007614.1 PpiC-type peptidyl-prolyl cis-trans isomerase 2410480 3786652 Nmul_A2114 Nitrosospira multiformis ATCC 25196 PpiC-type peptidyl-prolyl cis-trans isomerase YP_412799.1 2409683 D 323848 CDS YP_412800.1 82703234 3786653 complement(2410595..2411668) 1 NC_007614.1 alanine racemase 2411668 3786653 Nmul_A2115 Nitrosospira multiformis ATCC 25196 alanine racemase YP_412800.1 2410595 R 323848 CDS YP_412801.1 82703235 3786654 2411875..2413149 1 NC_007614.1 lysophospholipid transporter LplT 2413149 3786654 Nmul_A2116 Nitrosospira multiformis ATCC 25196 lysophospholipid transporter LplT YP_412801.1 2411875 D 323848 CDS YP_412802.1 82703236 3786655 complement(2413205..2413705) 1 NC_007614.1 hypothetical protein 2413705 3786655 Nmul_A2117 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412802.1 2413205 R 323848 CDS YP_412803.1 82703237 3786656 complement(2413706..2414716) 1 NC_007614.1 hypothetical protein 2414716 3786656 Nmul_A2118 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412803.1 2413706 R 323848 CDS YP_412804.1 82703238 3786657 complement(2414798..2415391) 1 NC_007614.1 hypothetical protein 2415391 3786657 Nmul_A2119 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412804.1 2414798 R 323848 CDS YP_412805.1 82703239 3786658 2415673..2417145 1 NC_007614.1 OmpA-like transmembrane domain-containing protein 2417145 3786658 Nmul_A2120 Nitrosospira multiformis ATCC 25196 OmpA-like transmembrane domain-containing protein YP_412805.1 2415673 D 323848 CDS YP_412806.1 82703240 3786659 complement(2417240..2418055) 1 NC_007614.1 phage SPO1 DNA polymerase-like protein 2418055 3786659 Nmul_A2121 Nitrosospira multiformis ATCC 25196 phage SPO1 DNA polymerase-like protein YP_412806.1 2417240 R 323848 CDS YP_412807.1 82703241 3786660 complement(2418052..2418513) 1 NC_007614.1 ribosomal-protein-alanine acetyltransferase 2418513 3786660 Nmul_A2122 Nitrosospira multiformis ATCC 25196 ribosomal-protein-alanine acetyltransferase YP_412807.1 2418052 R 323848 CDS YP_412808.1 82703242 3786661 complement(2418510..2419181) 1 NC_007614.1 peptidase M22, glycoprotease 2419181 3786661 Nmul_A2123 Nitrosospira multiformis ATCC 25196 peptidase M22, glycoprotease YP_412808.1 2418510 R 323848 CDS YP_412809.1 82703243 3786662 2419320..2419760 1 NC_007614.1 hypothetical protein 2419760 3786662 Nmul_A2124 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412809.1 2419320 D 323848 CDS YP_412810.1 82703244 3786663 complement(2419751..2420338) 1 NC_007614.1 2',5' RNA ligase 2420338 3786663 Nmul_A2125 Nitrosospira multiformis ATCC 25196 2',5' RNA ligase YP_412810.1 2419751 R 323848 CDS YP_412811.1 82703245 3786664 complement(2420408..2420941) 1 NC_007614.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2420941 ispF 3786664 ispF Nitrosospira multiformis ATCC 25196 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_412811.1 2420408 R 323848 CDS YP_412812.1 82703246 3786665 complement(2421068..2421766) 1 NC_007614.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2421766 ispD 3786665 ispD Nitrosospira multiformis ATCC 25196 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_412812.1 2421068 R 323848 CDS YP_412813.1 82703247 3786666 2422046..2423020 1 NC_007614.1 sigma-54 dependent trancsriptional regulator 2423020 3786666 Nmul_A2128 Nitrosospira multiformis ATCC 25196 sigma-54 dependent trancsriptional regulator YP_412813.1 2422046 D 323848 CDS YP_412814.1 82703248 3786667 complement(2423358..2424155) 1 NC_007614.1 hypothetical protein 2424155 3786667 Nmul_A2129 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412814.1 2423358 R 323848 CDS YP_412815.1 82703249 3784756 complement(2424239..2424841) 1 NC_007614.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 2424841 coaE 3784756 coaE Nitrosospira multiformis ATCC 25196 dephospho-CoA kinase YP_412815.1 2424239 R 323848 CDS YP_412816.1 82703250 3784757 complement(2424846..2425754) 1 NC_007614.1 prepilin peptidase 2425754 3784757 Nmul_A2131 Nitrosospira multiformis ATCC 25196 prepilin peptidase YP_412816.1 2424846 R 323848 CDS YP_412817.1 82703251 3784758 complement(2425775..2427073) 1 NC_007614.1 hypothetical protein 2427073 3784758 Nmul_A2132 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412817.1 2425775 R 323848 CDS YP_412818.1 82703252 3784759 complement(2427207..2428034) 1 NC_007614.1 cytochrome c assembly protein 2428034 3784759 Nmul_A2133 Nitrosospira multiformis ATCC 25196 cytochrome c assembly protein YP_412818.1 2427207 R 323848 CDS YP_412819.1 82703253 3784760 2428110..2429459 1 NC_007614.1 signal recognition particle protein 2429459 3784760 Nmul_A2134 Nitrosospira multiformis ATCC 25196 signal recognition particle protein YP_412819.1 2428110 D 323848 CDS YP_412820.1 82703254 3784761 complement(2429516..2429947) 1 NC_007614.1 hypothetical protein 2429947 3784761 Nmul_A2135 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412820.1 2429516 R 323848 CDS YP_412821.1 82703255 3784762 complement(2429947..2430396) 1 NC_007614.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2430396 dut 3784762 dut Nitrosospira multiformis ATCC 25196 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_412821.1 2429947 R 323848 CDS YP_412822.1 82703256 3784763 complement(2430393..2431628) 1 NC_007614.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2431628 3784763 Nmul_A2137 Nitrosospira multiformis ATCC 25196 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_412822.1 2430393 R 323848 CDS YP_412823.1 82703257 3784764 2431775..2432449 1 NC_007614.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2432449 radC 3784764 radC Nitrosospira multiformis ATCC 25196 DNA repair protein RadC YP_412823.1 2431775 D 323848 CDS YP_412824.1 82703258 3784765 2432513..2432749 1 NC_007614.1 50S ribosomal protein L28 2432749 3784765 Nmul_A2139 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L28 YP_412824.1 2432513 D 323848 CDS YP_412825.1 82703259 3784766 2432824..2432979 1 NC_007614.1 50S ribosomal protein L33 2432979 3784766 Nmul_A2140 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L33 YP_412825.1 2432824 D 323848 CDS YP_412826.1 82703260 3784767 complement(2433113..2434282) 1 NC_007614.1 Fatty acid desaturase 2434282 3784767 Nmul_A2141 Nitrosospira multiformis ATCC 25196 Fatty acid desaturase YP_412826.1 2433113 R 323848 CDS YP_412827.1 82703261 3784768 complement(2434498..2435085) 1 NC_007614.1 isochorismatase hydrolase 2435085 3784768 Nmul_A2142 Nitrosospira multiformis ATCC 25196 isochorismatase hydrolase YP_412827.1 2434498 R 323848 CDS YP_412828.1 82703262 3784769 complement(2435100..2435567) 1 NC_007614.1 integral membrane protein 2435567 3784769 Nmul_A2143 Nitrosospira multiformis ATCC 25196 integral membrane protein YP_412828.1 2435100 R 323848 CDS YP_412829.1 82703263 3784770 complement(2435564..2436883) 1 NC_007614.1 NAD-dependent epimerase/dehydratase 2436883 3784770 Nmul_A2144 Nitrosospira multiformis ATCC 25196 NAD-dependent epimerase/dehydratase YP_412829.1 2435564 R 323848 CDS YP_412830.1 82703264 3784771 2436998..2437564 1 NC_007614.1 hypothetical protein 2437564 3784771 Nmul_A2145 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412830.1 2436998 D 323848 CDS YP_412831.1 82703265 3784772 2437724..2438332 1 NC_007614.1 hypothetical protein 2438332 3784772 Nmul_A2146 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412831.1 2437724 D 323848 CDS YP_412832.1 82703266 3784773 2438342..2439148 1 NC_007614.1 inositol monophosphatase 2439148 3784773 Nmul_A2147 Nitrosospira multiformis ATCC 25196 inositol monophosphatase YP_412832.1 2438342 D 323848 CDS YP_412833.1 82703267 3784774 2439257..2439673 1 NC_007614.1 hypothetical protein 2439673 3784774 Nmul_A2148 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412833.1 2439257 D 323848 CDS YP_412834.1 82703268 3784775 2439775..2440935 1 NC_007614.1 zinc-containing alcohol dehydrogenase superfamily protein 2440935 3784775 Nmul_A2149 Nitrosospira multiformis ATCC 25196 zinc-containing alcohol dehydrogenase superfamily protein YP_412834.1 2439775 D 323848 CDS YP_412835.1 82703269 3784390 2441211..2445092 1 NC_007614.1 amine oxidase 2445092 3784390 Nmul_A2150 Nitrosospira multiformis ATCC 25196 amine oxidase YP_412835.1 2441211 D 323848 CDS YP_412836.1 82703270 3784391 2445099..2445902 1 NC_007614.1 amidohydrolase 2 2445902 3784391 Nmul_A2151 Nitrosospira multiformis ATCC 25196 amidohydrolase 2 YP_412836.1 2445099 D 323848 CDS YP_412837.1 82703271 3784392 2445904..2447067 1 NC_007614.1 group 1 glycosyl transferase 2447067 3784392 Nmul_A2152 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_412837.1 2445904 D 323848 CDS YP_412838.1 82703272 3784393 complement(2447046..2448011) 1 NC_007614.1 ribonuclease BN 2448011 3784393 Nmul_A2153 Nitrosospira multiformis ATCC 25196 ribonuclease BN YP_412838.1 2447046 R 323848 CDS YP_412839.1 82703273 3784394 complement(2448216..2449853) 1 NC_007614.1 hypothetical protein 2449853 3784394 Nmul_A2154 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412839.1 2448216 R 323848 CDS YP_412840.1 82703274 3784395 complement(2450017..2450313) 1 NC_007614.1 hypothetical protein 2450313 3784395 Nmul_A2155 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412840.1 2450017 R 323848 CDS YP_412841.1 82703275 3784396 complement(2450361..2451848) 1 NC_007614.1 tyrosinase/peptidase 2451848 3784396 Nmul_A2156 Nitrosospira multiformis ATCC 25196 tyrosinase/peptidase YP_412841.1 2450361 R 323848 CDS YP_412842.1 82703276 3784397 complement(2451851..2452285) 1 NC_007614.1 hypothetical protein 2452285 3784397 Nmul_A2157 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412842.1 2451851 R 323848 CDS YP_412843.1 82703277 3784398 complement(2452427..2453488) 1 NC_007614.1 catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester; RNA 3'-terminal-phosphate cyclase 2453488 3784398 Nmul_A2158 Nitrosospira multiformis ATCC 25196 RNA 3'-terminal-phosphate cyclase YP_412843.1 2452427 R 323848 CDS YP_412844.1 82703278 3784399 2453603..2453884 1 NC_007614.1 hypothetical protein 2453884 3784399 Nmul_A2159 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412844.1 2453603 D 323848 CDS YP_412845.1 82703279 3784400 2454038..2454307 1 NC_007614.1 hypothetical protein 2454307 3784400 Nmul_A2160 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412845.1 2454038 D 323848 CDS YP_412846.1 82703280 3784401 2454304..2454525 1 NC_007614.1 hypothetical protein 2454525 3784401 Nmul_A2161 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412846.1 2454304 D 323848 CDS YP_412847.1 82703281 3784402 2454531..2454995 1 NC_007614.1 hypothetical protein 2454995 3784402 Nmul_A2162 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412847.1 2454531 D 323848 CDS YP_412848.1 82703282 3784403 2455324..2457456 1 NC_007614.1 hypothetical protein 2457456 3784403 Nmul_A2163 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412848.1 2455324 D 323848 CDS YP_412849.1 82703283 3784404 2457453..2457830 1 NC_007614.1 hypothetical protein 2457830 3784404 Nmul_A2164 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412849.1 2457453 D 323848 CDS YP_412850.1 82703284 3784405 complement(2458024..2458365) 1 NC_007614.1 hypothetical protein 2458365 3784405 Nmul_A2165 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412850.1 2458024 R 323848 CDS YP_412851.1 82703285 3784406 complement(2458554..2459555) 1 NC_007614.1 peptidase T2, asparaginase 2 2459555 3784406 Nmul_A2166 Nitrosospira multiformis ATCC 25196 peptidase T2, asparaginase 2 YP_412851.1 2458554 R 323848 CDS YP_412852.1 82703286 3784407 complement(2460318..2461664) 1 NC_007614.1 cytochrome P450 2461664 3784407 Nmul_A2167 Nitrosospira multiformis ATCC 25196 cytochrome P450 YP_412852.1 2460318 R 323848 CDS YP_412853.1 82703287 3784408 2462014..2462397 1 NC_007614.1 hypothetical protein 2462397 3784408 Nmul_A2168 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412853.1 2462014 D 323848 CDS YP_412854.1 82703288 3785979 2463563..2463976 1 NC_007614.1 hypothetical protein 2463976 3785979 Nmul_A2169 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412854.1 2463563 D 323848 CDS YP_412855.1 82703289 3785980 2464133..2465632 1 NC_007614.1 thermostable carboxypeptidase 1 2465632 3785980 Nmul_A2170 Nitrosospira multiformis ATCC 25196 thermostable carboxypeptidase 1 YP_412855.1 2464133 D 323848 CDS YP_412856.1 82703290 3785981 2465767..2466303 1 NC_007614.1 3-demethylubiquinone-9 3-methyltransferase 2466303 3785981 Nmul_A2171 Nitrosospira multiformis ATCC 25196 3-demethylubiquinone-9 3-methyltransferase YP_412856.1 2465767 D 323848 CDS YP_412857.1 82703291 3785982 2467097..2467348 1 NC_007614.1 putative transposase 2467348 3785982 Nmul_A2172 Nitrosospira multiformis ATCC 25196 putative transposase YP_412857.1 2467097 D 323848 CDS YP_412858.1 82703292 3785983 2467518..2467925 1 NC_007614.1 transposase IS3/IS911 2467925 3785983 Nmul_A2173 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_412858.1 2467518 D 323848 CDS YP_412859.1 82703293 3785984 2467922..2468770 1 NC_007614.1 integrase catalytic subunit 2468770 3785984 Nmul_A2174 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412859.1 2467922 D 323848 CDS YP_412860.1 82703294 3785985 complement(2469169..2469678) 1 NC_007614.1 pyridoxamine 5'-phosphate oxidase-like protein 2469678 3785985 Nmul_A2175 Nitrosospira multiformis ATCC 25196 pyridoxamine 5'-phosphate oxidase-like protein YP_412860.1 2469169 R 323848 CDS YP_412861.1 82703295 3785987 complement(2470194..2470736) 1 NC_007614.1 hypothetical protein 2470736 3785987 Nmul_A2177 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412861.1 2470194 R 323848 CDS YP_412862.1 82703296 3785988 complement(2471236..2473857) 1 NC_007614.1 Type III restriction enzyme, res subunit 2473857 3785988 Nmul_A2178 Nitrosospira multiformis ATCC 25196 Type III restriction enzyme, res subunit YP_412862.1 2471236 R 323848 CDS YP_412863.1 82703297 3785989 complement(2473854..2475875) 1 NC_007614.1 adenine-specific DNA-methyltransferase 2475875 3785989 Nmul_A2179 Nitrosospira multiformis ATCC 25196 adenine-specific DNA-methyltransferase YP_412863.1 2473854 R 323848 CDS YP_412864.1 82703298 3785990 complement(2476505..2477392) 1 NC_007614.1 inner membrane protein 2477392 3785990 Nmul_A2180 Nitrosospira multiformis ATCC 25196 inner membrane protein YP_412864.1 2476505 R 323848 CDS YP_412865.1 82703299 3785991 complement(2477429..2478271) 1 NC_007614.1 hypothetical protein 2478271 3785991 Nmul_A2181 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412865.1 2477429 R 323848 CDS YP_412866.1 82703300 3785992 complement(2478282..2478533) 1 NC_007614.1 phage transcriptional regulator AlpA 2478533 3785992 Nmul_A2182 Nitrosospira multiformis ATCC 25196 phage transcriptional regulator AlpA YP_412866.1 2478282 R 323848 CDS YP_412867.1 82703301 3785993 complement(2478679..2479272) 1 NC_007614.1 hypothetical protein 2479272 3785993 Nmul_A2183 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412867.1 2478679 R 323848 CDS YP_412868.1 82703302 3785994 complement(2479299..2480510) 1 NC_007614.1 Phage integrase 2480510 3785994 Nmul_A2184 Nitrosospira multiformis ATCC 25196 Phage integrase YP_412868.1 2479299 R 323848 CDS YP_412869.1 82703303 3785996 complement(2481462..2482109) 1 NC_007614.1 phosphoglycolate phosphatase 2482109 3785996 Nmul_A2185 Nitrosospira multiformis ATCC 25196 phosphoglycolate phosphatase YP_412869.1 2481462 R 323848 CDS YP_412870.1 82703304 3785997 complement(2482233..2482952) 1 NC_007614.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2482952 3785997 Nmul_A2186 Nitrosospira multiformis ATCC 25196 3-demethylubiquinone-9 3-methyltransferase YP_412870.1 2482233 R 323848 CDS YP_412871.1 82703305 3786212 complement(2482949..2484295) 1 NC_007614.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; N-ethylammeline chlorohydrolase 2484295 3786212 Nmul_A2187 Nitrosospira multiformis ATCC 25196 N-ethylammeline chlorohydrolase YP_412871.1 2482949 R 323848 CDS YP_412872.1 82703306 3786213 complement(2484373..2485050) 1 NC_007614.1 OmpA/MotB 2485050 3786213 Nmul_A2188 Nitrosospira multiformis ATCC 25196 OmpA/MotB YP_412872.1 2484373 R 323848 CDS YP_412873.1 82703307 3786214 2485260..2487941 1 NC_007614.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 2487941 3786214 Nmul_A2189 Nitrosospira multiformis ATCC 25196 DNA gyrase subunit A YP_412873.1 2485260 D 323848 CDS YP_412874.1 82703308 3786215 2487985..2489073 1 NC_007614.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2489073 3786215 Nmul_A2190 Nitrosospira multiformis ATCC 25196 phosphoserine aminotransferase YP_412874.1 2487985 D 323848 CDS YP_412875.1 82703309 3786216 2489066..2490265 1 NC_007614.1 D-isomer specific 2-hydroxyacid dehydrogenase 2490265 3786216 Nmul_A2191 Nitrosospira multiformis ATCC 25196 D-isomer specific 2-hydroxyacid dehydrogenase YP_412875.1 2489066 D 323848 CDS YP_412876.1 82703310 3786217 2490323..2491390 1 NC_007614.1 chorismate mutase 2491390 3786217 Nmul_A2192 Nitrosospira multiformis ATCC 25196 chorismate mutase YP_412876.1 2490323 D 323848 CDS YP_412877.1 82703311 3786218 2491657..2492835 1 NC_007614.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2492835 3786218 Nmul_A2193 Nitrosospira multiformis ATCC 25196 histidinol-phosphate aminotransferase YP_412877.1 2491657 D 323848 CDS YP_412878.1 82703312 3786219 2492832..2493848 1 NC_007614.1 phospho-2-dehydro-3-deoxyheptonate aldolase 2493848 3786219 Nmul_A2194 Nitrosospira multiformis ATCC 25196 phospho-2-dehydro-3-deoxyheptonate aldolase YP_412878.1 2492832 D 323848 CDS YP_412879.1 82703313 3786220 2493874..2494833 1 NC_007614.1 prephenate dehydrogenase 2494833 3786220 Nmul_A2195 Nitrosospira multiformis ATCC 25196 prephenate dehydrogenase YP_412879.1 2493874 D 323848 CDS YP_412880.1 82703314 3786221 complement(2494862..2495152) 1 NC_007614.1 hypothetical protein 2495152 3786221 Nmul_A2196 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412880.1 2494862 R 323848 CDS YP_412881.1 82703315 3786222 complement(2495371..2495829) 1 NC_007614.1 hypothetical protein 2495829 3786222 Nmul_A2197 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412881.1 2495371 R 323848 CDS YP_412882.1 82703316 3786223 complement(2495984..2497012) 1 NC_007614.1 hypothetical protein 2497012 3786223 Nmul_A2198 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412882.1 2495984 R 323848 CDS YP_412883.1 82703317 3786224 complement(2497349..2498131) 1 NC_007614.1 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 2498131 3786224 Nmul_A2199 Nitrosospira multiformis ATCC 25196 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_412883.1 2497349 R 323848 CDS YP_412884.1 82703318 3786225 2498321..2499817 1 NC_007614.1 ABC transporter-like protein 2499817 3786225 Nmul_A2200 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412884.1 2498321 D 323848 CDS YP_412885.1 82703319 3786226 2499814..2500758 1 NC_007614.1 hypothetical protein 2500758 3786226 Nmul_A2201 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412885.1 2499814 D 323848 CDS YP_412886.1 82703320 3786227 2500755..2502644 1 NC_007614.1 hypothetical protein 2502644 3786227 Nmul_A2202 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412886.1 2500755 D 323848 CDS YP_412887.1 82703321 3786228 2502644..2503648 1 NC_007614.1 oxidoreductase-like protein 2503648 3786228 Nmul_A2203 Nitrosospira multiformis ATCC 25196 oxidoreductase-like protein YP_412887.1 2502644 D 323848 CDS YP_412888.1 82703322 3786229 2503645..2504769 1 NC_007614.1 DegT/DnrJ/EryC1/StrS aminotransferase 2504769 3786229 Nmul_A2204 Nitrosospira multiformis ATCC 25196 DegT/DnrJ/EryC1/StrS aminotransferase YP_412888.1 2503645 D 323848 CDS YP_412889.1 82703323 3786230 2504798..2505943 1 NC_007614.1 hypothetical protein 2505943 3786230 Nmul_A2205 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412889.1 2504798 D 323848 CDS YP_412890.1 82703324 3786289 complement(2506063..2506650) 1 NC_007614.1 transport-associated protein 2506650 3786289 Nmul_A2206 Nitrosospira multiformis ATCC 25196 transport-associated protein YP_412890.1 2506063 R 323848 CDS YP_412891.1 82703325 3786290 complement(2506892..2509492) 1 NC_007614.1 multi-sensor hybrid histidine kinase 2509492 3786290 Nmul_A2207 Nitrosospira multiformis ATCC 25196 multi-sensor hybrid histidine kinase YP_412891.1 2506892 R 323848 CDS YP_412892.1 82703326 3786291 2509828..2510871 1 NC_007614.1 integrase catalytic subunit 2510871 3786291 Nmul_A2208 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_412892.1 2509828 D 323848 CDS YP_412893.1 82703327 3786292 2511678..2511980 1 NC_007614.1 hypothetical protein 2511980 3786292 Nmul_A2209 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412893.1 2511678 D 323848 CDS YP_412894.1 82703328 3786293 2511982..2512455 1 NC_007614.1 XRE family transcriptional regulator 2512455 3786293 Nmul_A2210 Nitrosospira multiformis ATCC 25196 XRE family transcriptional regulator YP_412894.1 2511982 D 323848 CDS YP_412895.1 82703329 3786294 2512467..2512964 1 NC_007614.1 hypothetical protein 2512964 3786294 Nmul_A2211 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412895.1 2512467 D 323848 CDS YP_412896.1 82703330 3786295 complement(2513126..2513497) 1 NC_007614.1 hypothetical protein 2513497 3786295 Nmul_A2212 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412896.1 2513126 R 323848 CDS YP_412897.1 82703331 3786296 complement(2513497..2514120) 1 NC_007614.1 RhsD protein 2514120 3786296 Nmul_A2213 Nitrosospira multiformis ATCC 25196 RhsD protein YP_412897.1 2513497 R 323848 CDS YP_412898.1 82703332 3786297 complement(2514139..2514276) 1 NC_007614.1 putative rhs-like protein 2514276 3786297 Nmul_A2214 Nitrosospira multiformis ATCC 25196 putative rhs-like protein YP_412898.1 2514139 R 323848 CDS YP_412899.1 82703333 3786299 2514979..2515674 1 NC_007614.1 hypothetical protein 2515674 3786299 Nmul_A2215 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412899.1 2514979 D 323848 CDS YP_412900.1 82703334 3786300 complement(2515783..2517102) 1 NC_007614.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 2517102 rumA 3786300 rumA Nitrosospira multiformis ATCC 25196 23S rRNA 5-methyluridine methyltransferase YP_412900.1 2515783 R 323848 CDS YP_412901.1 82703335 3786301 complement(2517226..2518029) 1 NC_007614.1 hypothetical protein 2518029 3786301 Nmul_A2217 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412901.1 2517226 R 323848 CDS YP_412902.1 82703336 3786302 complement(2518088..2518510) 1 NC_007614.1 hypothetical protein 2518510 3786302 Nmul_A2218 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412902.1 2518088 R 323848 CDS YP_412903.1 82703337 3786303 complement(2518528..2518752) 1 NC_007614.1 hypothetical protein 2518752 3786303 Nmul_A2219 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412903.1 2518528 R 323848 CDS YP_412904.1 82703338 3786304 complement(2518749..2520842) 1 NC_007614.1 hypothetical protein 2520842 3786304 Nmul_A2220 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412904.1 2518749 R 323848 CDS YP_412905.1 82703339 3786305 complement(2521091..2521978) 1 NC_007614.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 2521978 cysM 3786305 cysM Nitrosospira multiformis ATCC 25196 cysteine synthase B YP_412905.1 2521091 R 323848 CDS YP_412906.1 82703340 3786306 complement(2522142..2522444) 1 NC_007614.1 competence protein ComEA helix-hairpin-helix region 2522444 3786306 Nmul_A2222 Nitrosospira multiformis ATCC 25196 competence protein ComEA helix-hairpin-helix region YP_412906.1 2522142 R 323848 CDS YP_412907.1 82703341 3786307 complement(2522598..2523554) 1 NC_007614.1 hypothetical protein 2523554 3786307 Nmul_A2223 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412907.1 2522598 R 323848 CDS YP_412908.1 82703342 3784925 complement(2523551..2525566) 1 NC_007614.1 hypothetical protein 2525566 3784925 Nmul_A2224 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412908.1 2523551 R 323848 CDS YP_412909.1 82703343 3784926 complement(2525579..2526535) 1 NC_007614.1 hypothetical protein 2526535 3784926 Nmul_A2225 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412909.1 2525579 R 323848 CDS YP_412910.1 82703344 3784927 complement(2526538..2527941) 1 NC_007614.1 hypothetical protein 2527941 3784927 Nmul_A2226 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412910.1 2526538 R 323848 CDS YP_412911.1 82703345 3784928 complement(2528410..2528868) 1 NC_007614.1 single-strand binding protein 2528868 3784928 Nmul_A2227 Nitrosospira multiformis ATCC 25196 single-strand binding protein YP_412911.1 2528410 R 323848 CDS YP_412912.1 82703346 3784929 complement(2528869..2530254) 1 NC_007614.1 major facilitator transporter 2530254 3784929 Nmul_A2228 Nitrosospira multiformis ATCC 25196 major facilitator transporter YP_412912.1 2528869 R 323848 CDS YP_412913.1 82703347 3784930 2530367..2533201 1 NC_007614.1 excinuclease ABC subunit A 2533201 3784930 Nmul_A2229 Nitrosospira multiformis ATCC 25196 excinuclease ABC subunit A YP_412913.1 2530367 D 323848 CDS YP_412914.1 82703348 3784931 2533227..2534582 1 NC_007614.1 hydroxypyruvate reductase 2534582 3784931 Nmul_A2230 Nitrosospira multiformis ATCC 25196 hydroxypyruvate reductase YP_412914.1 2533227 D 323848 CDS YP_412915.1 82703349 3784932 2534765..2535469 1 NC_007614.1 two component transcriptional regulator 2535469 3784932 Nmul_A2231 Nitrosospira multiformis ATCC 25196 two component transcriptional regulator YP_412915.1 2534765 D 323848 CDS YP_412916.1 82703350 3784933 2535510..2536811 1 NC_007614.1 PAS/PAC sensor signal transduction histidine kinase 2536811 3784933 Nmul_A2232 Nitrosospira multiformis ATCC 25196 PAS/PAC sensor signal transduction histidine kinase YP_412916.1 2535510 D 323848 CDS YP_412917.1 82703351 3784934 2536934..2537533 1 NC_007614.1 NUDIX hydrolase 2537533 3784934 Nmul_A2233 Nitrosospira multiformis ATCC 25196 NUDIX hydrolase YP_412917.1 2536934 D 323848 CDS YP_412918.1 82703352 3784935 complement(2537613..2538245) 1 NC_007614.1 hypothetical protein 2538245 3784935 Nmul_A2234 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412918.1 2537613 R 323848 CDS YP_412919.1 82703353 3784936 complement(2538242..2538856) 1 NC_007614.1 electron transport protein SCO1/SenC 2538856 3784936 Nmul_A2235 Nitrosospira multiformis ATCC 25196 electron transport protein SCO1/SenC YP_412919.1 2538242 R 323848 CDS YP_412920.1 82703354 3784937 complement(2539020..2540294) 1 NC_007614.1 hypothetical protein 2540294 3784937 Nmul_A2236 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412920.1 2539020 R 323848 CDS YP_412921.1 82703355 3784938 complement(2540423..2541928) 1 NC_007614.1 hypothetical protein 2541928 3784938 Nmul_A2237 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412921.1 2540423 R 323848 CDS YP_412922.1 82703356 3784939 complement(2542609..2543742) 1 NC_007614.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2543742 3784939 Nmul_A2238 Nitrosospira multiformis ATCC 25196 chaperone protein DnaJ YP_412922.1 2542609 R 323848 CDS YP_412923.1 82703357 3784940 complement(2543887..2545821) 1 NC_007614.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2545821 dnaK 3784940 dnaK Nitrosospira multiformis ATCC 25196 molecular chaperone DnaK YP_412923.1 2543887 R 323848 CDS YP_412924.1 82703358 3784941 complement(2545905..2546486) 1 NC_007614.1 GrpE protein 2546486 3784941 Nmul_A2240 Nitrosospira multiformis ATCC 25196 GrpE protein YP_412924.1 2545905 R 323848 CDS YP_412925.1 82703359 3784942 complement(2546609..2547991) 1 NC_007614.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2547991 3784942 Nmul_A2241 Nitrosospira multiformis ATCC 25196 adenylosuccinate lyase YP_412925.1 2546609 R 323848 CDS YP_412926.1 82703360 3784943 2548100..2548708 1 NC_007614.1 glutathione S-transferase-like protein 2548708 3784943 Nmul_A2242 Nitrosospira multiformis ATCC 25196 glutathione S-transferase-like protein YP_412926.1 2548100 D 323848 CDS YP_412927.1 82703361 3785020 complement(2548980..2550071) 1 NC_007614.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2550071 mnmA 3785020 mnmA Nitrosospira multiformis ATCC 25196 tRNA-specific 2-thiouridylase MnmA YP_412927.1 2548980 R 323848 CDS YP_412928.1 82703362 3785021 complement(2550073..2550519) 1 NC_007614.1 NUDIX hydrolase 2550519 3785021 Nmul_A2244 Nitrosospira multiformis ATCC 25196 NUDIX hydrolase YP_412928.1 2550073 R 323848 CDS YP_412929.1 82703363 3785022 2550786..2552039 1 NC_007614.1 isocitrate dehydrogenase, NADP-dependent 2552039 3785022 Nmul_A2245 Nitrosospira multiformis ATCC 25196 isocitrate dehydrogenase, NADP-dependent YP_412929.1 2550786 D 323848 CDS YP_412930.1 82703364 3785023 complement(2552228..2552431) 1 NC_007614.1 cold-shock DNA-binding domain-containing protein 2552431 3785023 Nmul_A2246 Nitrosospira multiformis ATCC 25196 cold-shock DNA-binding domain-containing protein YP_412930.1 2552228 R 323848 CDS YP_412931.1 82703365 3785024 2552712..2553020 1 NC_007614.1 ATP-dependent Clp protease adaptor protein ClpS 2553020 3785024 Nmul_A2247 Nitrosospira multiformis ATCC 25196 ATP-dependent Clp protease adaptor protein ClpS YP_412931.1 2552712 D 323848 CDS YP_412932.1 82703366 3785025 2553022..2555280 1 NC_007614.1 ATPase with chaperone activity 2555280 3785025 Nmul_A2248 Nitrosospira multiformis ATCC 25196 ATPase with chaperone activity YP_412932.1 2553022 D 323848 CDS YP_412933.1 82703367 3785026 complement(2555473..2555691) 1 NC_007614.1 hypothetical protein 2555691 3785026 Nmul_A2249 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412933.1 2555473 R 323848 CDS YP_412934.1 82703368 3785027 complement(2556092..2558662) 1 NC_007614.1 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 2558662 3785027 Nmul_A2250 Nitrosospira multiformis ATCC 25196 cyanophycin synthetase YP_412934.1 2556092 R 323848 CDS YP_412935.1 82703369 3785028 complement(2558711..2560951) 1 NC_007614.1 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 2560951 3785028 Nmul_A2251 Nitrosospira multiformis ATCC 25196 cyanophycin synthetase YP_412935.1 2558711 R 323848 CDS YP_412936.1 82703370 3785029 2561032..2561343 1 NC_007614.1 hypothetical protein 2561343 3785029 Nmul_A2252 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412936.1 2561032 D 323848 CDS YP_412937.1 82703371 3785030 complement(2561345..2561824) 1 NC_007614.1 hypothetical protein 2561824 3785030 Nmul_A2253 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412937.1 2561345 R 323848 CDS YP_412938.1 82703372 3785031 complement(2561821..2564169) 1 NC_007614.1 ABC transporter-like protein 2564169 3785031 Nmul_A2254 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_412938.1 2561821 R 323848 CDS YP_412939.1 82703373 3785032 complement(2564440..2565315) 1 NC_007614.1 hypothetical protein 2565315 3785032 Nmul_A2255 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412939.1 2564440 R 323848 CDS YP_412940.1 82703374 3785033 complement(2565427..2566656) 1 NC_007614.1 class I and II aminotransferase 2566656 3785033 Nmul_A2256 Nitrosospira multiformis ATCC 25196 class I and II aminotransferase YP_412940.1 2565427 R 323848 CDS YP_412941.1 82703375 3785034 complement(2566653..2568833) 1 NC_007614.1 hypothetical protein 2568833 3785034 Nmul_A2257 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412941.1 2566653 R 323848 CDS YP_412942.1 82703376 3785035 complement(2569145..2569843) 1 NC_007614.1 hypothetical protein 2569843 3785035 Nmul_A2258 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412942.1 2569145 R 323848 CDS YP_412943.1 82703377 3785036 2569977..2570639 1 NC_007614.1 catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; thiopurine S-methyltransferase 2570639 3785036 Nmul_A2259 Nitrosospira multiformis ATCC 25196 thiopurine S-methyltransferase YP_412943.1 2569977 D 323848 CDS YP_412944.1 82703378 3785037 2570826..2571371 1 NC_007614.1 Slp family outer membrane lipoprotein 2571371 3785037 Nmul_A2260 Nitrosospira multiformis ATCC 25196 Slp family outer membrane lipoprotein YP_412944.1 2570826 D 323848 CDS YP_412945.1 82703379 3785038 2571637..2572899 1 NC_007614.1 hypothetical protein 2572899 3785038 Nmul_A2261 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412945.1 2571637 D 323848 CDS YP_412946.1 82703380 3785039 complement(2573141..2573530) 1 NC_007614.1 hypothetical protein 2573530 3785039 Nmul_A2262 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412946.1 2573141 R 323848 CDS YP_412947.1 82703381 3785425 complement(2573626..2574015) 1 NC_007614.1 endoribonuclease L-PSP 2574015 3785425 Nmul_A2263 Nitrosospira multiformis ATCC 25196 endoribonuclease L-PSP YP_412947.1 2573626 R 323848 CDS YP_412948.1 82703382 3785426 complement(2574090..2574551) 1 NC_007614.1 hypothetical protein 2574551 3785426 Nmul_A2264 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412948.1 2574090 R 323848 CDS YP_412949.1 82703383 3785427 2574550..2575092 1 NC_007614.1 LuxR family transcriptional regulator 2575092 3785427 Nmul_A2265 Nitrosospira multiformis ATCC 25196 LuxR family transcriptional regulator YP_412949.1 2574550 D 323848 CDS YP_412950.1 82703384 3785428 complement(2575147..2577531) 1 NC_007614.1 sucrose synthase 2577531 3785428 Nmul_A2266 Nitrosospira multiformis ATCC 25196 sucrose synthase YP_412950.1 2575147 R 323848 CDS YP_412951.1 82703385 3785429 complement(2577515..2579680) 1 NC_007614.1 sucrose-phosphate phosphatase 2579680 3785429 Nmul_A2267 Nitrosospira multiformis ATCC 25196 sucrose-phosphate phosphatase YP_412951.1 2577515 R 323848 CDS YP_412952.1 82703386 3785430 complement(2579688..2580578) 1 NC_007614.1 PfkB 2580578 3785430 Nmul_A2268 Nitrosospira multiformis ATCC 25196 PfkB YP_412952.1 2579688 R 323848 CDS YP_412953.1 82703387 3785431 complement(2581010..2581744) 1 NC_007614.1 ubiquinone/menaquinone biosynthesis methyltransferase 2581744 3785431 Nmul_A2269 Nitrosospira multiformis ATCC 25196 ubiquinone/menaquinone biosynthesis methyltransferase YP_412953.1 2581010 R 323848 CDS YP_412954.1 82703388 3785432 complement(2581800..2582219) 1 NC_007614.1 hypothetical protein 2582219 3785432 Nmul_A2270 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412954.1 2581800 R 323848 CDS YP_412955.1 82703389 3785433 complement(2582563..2583072) 1 NC_007614.1 putative transmembrane protein 2583072 3785433 Nmul_A2271 Nitrosospira multiformis ATCC 25196 putative transmembrane protein YP_412955.1 2582563 R 323848 CDS YP_412956.1 82703390 3785434 2583314..2584438 1 NC_007614.1 zinc-containing alcohol dehydrogenase superfamily protein 2584438 3785434 Nmul_A2272 Nitrosospira multiformis ATCC 25196 zinc-containing alcohol dehydrogenase superfamily protein YP_412956.1 2583314 D 323848 CDS YP_412957.1 82703391 3785435 2584476..2585345 1 NC_007614.1 carboxylesterase 2585345 3785435 Nmul_A2273 Nitrosospira multiformis ATCC 25196 carboxylesterase YP_412957.1 2584476 D 323848 CDS YP_412958.1 82703392 3785436 2585912..2586844 1 NC_007614.1 peptide chain release factor 2 2586844 3785436 Nmul_A2274 Nitrosospira multiformis ATCC 25196 peptide chain release factor 2 YP_412958.1 2585912 D 323848 CDS YP_412959.1 82703393 3785437 2586860..2588383 1 NC_007614.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2588383 lysS 3785437 lysS Nitrosospira multiformis ATCC 25196 lysyl-tRNA synthetase YP_412959.1 2586860 D 323848 CDS YP_412960.1 82703394 3785438 2588909..2591314 1 NC_007614.1 heavy metal translocating P-type ATPase 2591314 3785438 Nmul_A2276 Nitrosospira multiformis ATCC 25196 heavy metal translocating P-type ATPase YP_412960.1 2588909 D 323848 CDS YP_412961.1 82703395 3785439 2591399..2591578 1 NC_007614.1 heavy metal transport/detoxification protein 2591578 3785439 Nmul_A2277 Nitrosospira multiformis ATCC 25196 heavy metal transport/detoxification protein YP_412961.1 2591399 D 323848 CDS YP_412962.1 82703396 3785440 2591595..2591873 1 NC_007614.1 hypothetical protein 2591873 3785440 Nmul_A2278 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412962.1 2591595 D 323848 CDS YP_412963.1 82703397 3785441 2591942..2592673 1 NC_007614.1 cytochrome c 2592673 3785441 Nmul_A2279 Nitrosospira multiformis ATCC 25196 cytochrome c YP_412963.1 2591942 D 323848 CDS YP_412964.1 82703398 3785442 2592670..2593959 1 NC_007614.1 cytochrome c, class I 2593959 3785442 Nmul_A2280 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_412964.1 2592670 D 323848 CDS YP_412965.1 82703399 3785443 complement(2594014..2595006) 1 NC_007614.1 NAD-dependent epimerase/dehydratase 2595006 3785443 Nmul_A2281 Nitrosospira multiformis ATCC 25196 NAD-dependent epimerase/dehydratase YP_412965.1 2594014 R 323848 CDS YP_412966.1 82703400 3785098 complement(2595348..2596991) 1 NC_007614.1 DNA mismatch repair protein MutS-like protein 2596991 3785098 Nmul_A2282 Nitrosospira multiformis ATCC 25196 DNA mismatch repair protein MutS-like protein YP_412966.1 2595348 R 323848 CDS YP_412967.1 82703401 3785099 complement(2597227..2598669) 1 NC_007614.1 Type I secretion outer membrane protein TolC 2598669 3785099 Nmul_A2283 Nitrosospira multiformis ATCC 25196 Type I secretion outer membrane protein TolC YP_412967.1 2597227 R 323848 CDS YP_412968.1 82703402 3785100 complement(2598765..2599442) 1 NC_007614.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase 2599442 3785100 Nmul_A2284 Nitrosospira multiformis ATCC 25196 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_412968.1 2598765 R 323848 CDS YP_412969.1 82703403 3785101 2599705..2601612 1 NC_007614.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2601612 3785101 Nmul_A2285 Nitrosospira multiformis ATCC 25196 thiamine biosynthesis protein ThiC YP_412969.1 2599705 D 323848 CDS YP_412970.1 82703404 3785102 2601912..2602733 1 NC_007614.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 2602733 3785102 Nmul_A2286 Nitrosospira multiformis ATCC 25196 undecaprenyl pyrophosphate phosphatase YP_412970.1 2601912 D 323848 CDS YP_412971.1 82703405 3785103 complement(2602883..2603512) 1 NC_007614.1 rhodanese-like protein 2603512 3785103 Nmul_A2287 Nitrosospira multiformis ATCC 25196 rhodanese-like protein YP_412971.1 2602883 R 323848 CDS YP_412972.1 82703406 3785104 2603604..2605013 1 NC_007614.1 glutamine synthetase, type I 2605013 3785104 Nmul_A2288 Nitrosospira multiformis ATCC 25196 glutamine synthetase, type I YP_412972.1 2603604 D 323848 CDS YP_412973.1 82703407 3785105 2605073..2605738 1 NC_007614.1 Sel1 repeat-containing protein 2605738 3785105 Nmul_A2289 Nitrosospira multiformis ATCC 25196 Sel1 repeat-containing protein YP_412973.1 2605073 D 323848 CDS YP_412974.1 82703408 3785106 2605963..2607225 1 NC_007614.1 hypothetical protein 2607225 3785106 Nmul_A2290 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412974.1 2605963 D 323848 CDS YP_412975.1 82703409 3785107 2607322..2607789 1 NC_007614.1 hypothetical protein 2607789 3785107 Nmul_A2291 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412975.1 2607322 D 323848 CDS YP_412976.1 82703410 3785108 2607500..2608543 1 NC_007614.1 hypothetical protein 2608543 3785108 Nmul_A2292 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412976.1 2607500 D 323848 CDS YP_412977.1 82703411 3785109 2608575..2609138 1 NC_007614.1 RhsD protein 2609138 3785109 Nmul_A2293 Nitrosospira multiformis ATCC 25196 RhsD protein YP_412977.1 2608575 D 323848 CDS YP_412978.1 82703412 3785111 complement(2609867..2610169) 1 NC_007614.1 hypothetical protein 2610169 3785111 Nmul_A2295 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412978.1 2609867 R 323848 CDS YP_412979.1 82703413 3785112 complement(2610416..2611252) 1 NC_007614.1 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 2611252 3785112 Nmul_A2296 Nitrosospira multiformis ATCC 25196 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_412979.1 2610416 R 323848 CDS YP_412980.1 82703414 3785113 complement(2611423..2614500) 1 NC_007614.1 response regulator receiver /GGDEF/PAS/PAC domain-containing protein 2614500 3785113 Nmul_A2297 Nitrosospira multiformis ATCC 25196 response regulator receiver /GGDEF/PAS/PAC domain-containing protein YP_412980.1 2611423 R 323848 CDS YP_412981.1 82703415 3785114 complement(2614632..2615072) 1 NC_007614.1 response regulator receiver domain-containing protein 2615072 3785114 Nmul_A2298 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_412981.1 2614632 R 323848 CDS YP_412982.1 82703416 3785115 complement(2615085..2617097) 1 NC_007614.1 PAS/PAC sensor signal transduction histidine kinase 2617097 3785115 Nmul_A2299 Nitrosospira multiformis ATCC 25196 PAS/PAC sensor signal transduction histidine kinase YP_412982.1 2615085 R 323848 CDS YP_412983.1 82703417 3785116 2617488..2618135 1 NC_007614.1 MotA/TolQ/ExbB proton channel 2618135 3785116 Nmul_A2300 Nitrosospira multiformis ATCC 25196 MotA/TolQ/ExbB proton channel YP_412983.1 2617488 D 323848 CDS YP_412984.1 82703418 3785117 2618122..2618523 1 NC_007614.1 biopolymer transport protein ExbD/TolR 2618523 3785117 Nmul_A2301 Nitrosospira multiformis ATCC 25196 biopolymer transport protein ExbD/TolR YP_412984.1 2618122 D 323848 CDS YP_412985.1 82703419 3786707 2618534..2619397 1 NC_007614.1 hypothetical protein 2619397 3786707 Nmul_A2302 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412985.1 2618534 D 323848 CDS YP_412986.1 82703420 3786708 complement(2619512..2621359) 1 NC_007614.1 peptidase S9, prolyl oligopeptidase active site region 2621359 3786708 Nmul_A2303 Nitrosospira multiformis ATCC 25196 peptidase S9, prolyl oligopeptidase active site region YP_412986.1 2619512 R 323848 CDS YP_412987.1 82703421 3786709 2621582..2623390 1 NC_007614.1 ATP-dependent DNA helicase RecQ 2623390 3786709 Nmul_A2304 Nitrosospira multiformis ATCC 25196 ATP-dependent DNA helicase RecQ YP_412987.1 2621582 D 323848 CDS YP_412988.1 82703422 3786710 2623407..2624003 1 NC_007614.1 hypothetical protein 2624003 3786710 Nmul_A2305 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412988.1 2623407 D 323848 CDS YP_412989.1 82703423 3786711 complement(2624004..2624324) 1 NC_007614.1 hypothetical protein 2624324 3786711 Nmul_A2306 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412989.1 2624004 R 323848 CDS YP_412990.1 82703424 3786712 complement(2624393..2625571) 1 NC_007614.1 putative transcriptional regulator 2625571 3786712 Nmul_A2307 Nitrosospira multiformis ATCC 25196 putative transcriptional regulator YP_412990.1 2624393 R 323848 CDS YP_412991.1 82703425 3786713 2625978..2626349 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 2626349 3786713 Nmul_A2308 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_412991.1 2625978 D 323848 CDS YP_412992.1 82703426 3786714 2626346..2628229 1 NC_007614.1 glycoside hydrolase 15-like protein 2628229 3786714 Nmul_A2309 Nitrosospira multiformis ATCC 25196 glycoside hydrolase 15-like protein YP_412992.1 2626346 D 323848 CDS YP_412993.1 82703427 3786715 complement(2628383..2628634) 1 NC_007614.1 hypothetical protein 2628634 3786715 Nmul_A2310 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_412993.1 2628383 R 323848 CDS YP_412994.1 82703428 3786717 2628831..2630267 1 NC_007614.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase 2630267 3786717 Nmul_A2311 Nitrosospira multiformis ATCC 25196 putative transglycosylase YP_412994.1 2628831 D 323848 CDS YP_412995.1 82703429 3786718 2630409..2631047 1 NC_007614.1 peroxidase 2631047 3786718 Nmul_A2312 Nitrosospira multiformis ATCC 25196 peroxidase YP_412995.1 2630409 D 323848 CDS YP_412996.1 82703430 3786719 complement(2631218..2632726) 1 NC_007614.1 uroporphyrin-III C-methyltransferase 2632726 3786719 Nmul_A2313 Nitrosospira multiformis ATCC 25196 uroporphyrin-III C-methyltransferase YP_412996.1 2631218 R 323848 CDS YP_412997.1 82703431 3786720 2632839..2633678 1 NC_007614.1 PHP-like protein 2633678 3786720 Nmul_A2314 Nitrosospira multiformis ATCC 25196 PHP-like protein YP_412997.1 2632839 D 323848 CDS YP_412998.1 82703432 3786721 2633742..2634374 1 NC_007614.1 Sua5/YciO/YrdC/YwlC 2634374 3786721 Nmul_A2315 Nitrosospira multiformis ATCC 25196 Sua5/YciO/YrdC/YwlC YP_412998.1 2633742 D 323848 CDS YP_412999.1 82703433 3786722 2634367..2635017 1 NC_007614.1 peptidase M50 2635017 3786722 Nmul_A2316 Nitrosospira multiformis ATCC 25196 peptidase M50 YP_412999.1 2634367 D 323848 CDS YP_413000.1 82703434 3786723 2635068..2636270 1 NC_007614.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2636270 3786723 Nmul_A2317 Nitrosospira multiformis ATCC 25196 tryptophanyl-tRNA synthetase YP_413000.1 2635068 D 323848 CDS YP_413001.1 82703435 3786724 2636291..2637202 1 NC_007614.1 chromosome segregation and condensation protein ScpA 2637202 3786724 Nmul_A2318 Nitrosospira multiformis ATCC 25196 chromosome segregation and condensation protein ScpA YP_413001.1 2636291 D 323848 CDS YP_413002.1 82703436 3785309 2637168..2637803 1 NC_007614.1 putative transcriptional regulator 2637803 3785309 Nmul_A2319 Nitrosospira multiformis ATCC 25196 putative transcriptional regulator YP_413002.1 2637168 D 323848 CDS YP_413003.1 82703437 3785310 complement(2638153..2640261) 1 NC_007614.1 cytochrome c, class I 2640261 3785310 Nmul_A2320 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_413003.1 2638153 R 323848 CDS YP_413004.1 82703438 3785311 complement(2640258..2640683) 1 NC_007614.1 copper resistance protein CopC 2640683 3785311 Nmul_A2321 Nitrosospira multiformis ATCC 25196 copper resistance protein CopC YP_413004.1 2640258 R 323848 CDS YP_413005.1 82703439 3785312 complement(2640965..2641621) 1 NC_007614.1 hypothetical protein 2641621 3785312 Nmul_A2322 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413005.1 2640965 R 323848 CDS YP_413006.1 82703440 3785313 complement(2641705..2642295) 1 NC_007614.1 similar to Nitrosospira sp. NpAV ORF4 in GenBank Accession Number U92432; hypothetical protein 2642295 3785313 Nmul_A2323 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413006.1 2641705 R 323848 CDS YP_413007.1 82703441 3785314 complement(2642477..2643721) 1 NC_007614.1 monooxygenase subunit B protein 2643721 3785314 Nmul_A2324 Nitrosospira multiformis ATCC 25196 monooxygenase subunit B protein YP_413007.1 2642477 R 323848 CDS YP_413008.1 82703442 3785315 complement(2643722..2644546) 1 NC_007614.1 ammonia monooxygenase 2644546 3785315 Nmul_A2325 Nitrosospira multiformis ATCC 25196 ammonia monooxygenase YP_413008.1 2643722 R 323848 CDS YP_413009.1 82703443 3785316 complement(2644870..2645700) 1 NC_007614.1 ammonia monooxygenase/methane monooxygenase subunit C 2645700 3785316 Nmul_A2326 Nitrosospira multiformis ATCC 25196 ammonia monooxygenase/methane monooxygenase subunit C YP_413009.1 2644870 R 323848 CDS YP_413010.1 82703444 3785317 2646354..2648558 1 NC_007614.1 primosomal protein N' 2648558 3785317 Nmul_A2327 Nitrosospira multiformis ATCC 25196 primosomal protein N' YP_413010.1 2646354 D 323848 CDS YP_413011.1 82703445 3785318 2648715..2650145 1 NC_007614.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2650145 3785318 Nmul_A2328 Nitrosospira multiformis ATCC 25196 argininosuccinate lyase YP_413011.1 2648715 D 323848 CDS YP_413012.1 82703446 3785319 2650158..2651042 1 NC_007614.1 fructosamine kinase 2651042 3785319 Nmul_A2329 Nitrosospira multiformis ATCC 25196 fructosamine kinase YP_413012.1 2650158 D 323848 CDS YP_413013.1 82703447 3785320 complement(2651060..2652667) 1 NC_007614.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 2652667 prfC 3785320 prfC Nitrosospira multiformis ATCC 25196 peptide chain release factor 3 YP_413013.1 2651060 R 323848 CDS YP_413014.1 82703448 3785321 complement(2652685..2654784) 1 NC_007614.1 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein 2654784 3785321 Nmul_A2331 Nitrosospira multiformis ATCC 25196 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein YP_413014.1 2652685 R 323848 CDS YP_413015.1 82703449 3785322 complement(2654781..2656283) 1 NC_007614.1 binding-protein dependent transport system inner membrane protein 2656283 3785322 Nmul_A2332 Nitrosospira multiformis ATCC 25196 binding-protein dependent transport system inner membrane protein YP_413015.1 2654781 R 323848 CDS YP_413016.1 82703450 3785323 complement(2656305..2657282) 1 NC_007614.1 binding-protein dependent transport system inner membrane protein 2657282 3785323 Nmul_A2333 Nitrosospira multiformis ATCC 25196 binding-protein dependent transport system inner membrane protein YP_413016.1 2656305 R 323848 CDS YP_413017.1 82703451 3785324 complement(2657292..2659559) 1 NC_007614.1 extracellular solute-binding protein 2659559 3785324 Nmul_A2334 Nitrosospira multiformis ATCC 25196 extracellular solute-binding protein YP_413017.1 2657292 R 323848 CDS YP_413018.1 82703452 3785325 2659842..2660624 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 2660624 3785325 Nmul_A2335 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_413018.1 2659842 D 323848 CDS YP_413019.1 82703453 3785326 complement(2660638..2662518) 1 NC_007614.1 PpiC-type peptidyl-prolyl cis-trans isomerase 2662518 3785326 Nmul_A2336 Nitrosospira multiformis ATCC 25196 PpiC-type peptidyl-prolyl cis-trans isomerase YP_413019.1 2660638 R 323848 CDS YP_413020.1 82703454 3784740 complement(2662757..2663029) 1 NC_007614.1 histone-like DNA-binding protein 2663029 3784740 Nmul_A2337 Nitrosospira multiformis ATCC 25196 histone-like DNA-binding protein YP_413020.1 2662757 R 323848 CDS YP_413021.1 82703455 3784741 complement(2663193..2665604) 1 NC_007614.1 ATP-dependent protease La 2665604 3784741 Nmul_A2338 Nitrosospira multiformis ATCC 25196 ATP-dependent protease La YP_413021.1 2663193 R 323848 CDS YP_413022.1 82703456 3784742 complement(2665698..2666975) 1 NC_007614.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2666975 clpX 3784742 clpX Nitrosospira multiformis ATCC 25196 ATP-dependent protease ATP-binding subunit ClpX YP_413022.1 2665698 R 323848 CDS YP_413023.1 82703457 3784743 complement(2667043..2667684) 1 NC_007614.1 ATP-dependent Clp protease, proteolytic subunit ClpP 2667684 3784743 Nmul_A2340 Nitrosospira multiformis ATCC 25196 ATP-dependent Clp protease, proteolytic subunit ClpP YP_413023.1 2667043 R 323848 CDS YP_413024.1 82703458 3784744 complement(2667687..2668994) 1 NC_007614.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2668994 tig 3784744 tig Nitrosospira multiformis ATCC 25196 trigger factor YP_413024.1 2667687 R 323848 CDS YP_413025.1 82703459 3784746 complement(2669290..2670036) 1 NC_007614.1 Short-chain dehydrogenase/reductase SDR 2670036 3784746 Nmul_A2342 Nitrosospira multiformis ATCC 25196 Short-chain dehydrogenase/reductase SDR YP_413025.1 2669290 R 323848 CDS YP_413026.1 82703460 3784747 complement(2670156..2670998) 1 NC_007614.1 squalene/phytoene synthase 2670998 3784747 Nmul_A2343 Nitrosospira multiformis ATCC 25196 squalene/phytoene synthase YP_413026.1 2670156 R 323848 CDS YP_413027.1 82703461 3784748 complement(2671276..2672934) 1 NC_007614.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 2672934 groEL 3784748 groEL Nitrosospira multiformis ATCC 25196 chaperonin GroEL YP_413027.1 2671276 R 323848 CDS YP_413028.1 82703462 3784749 complement(2672987..2673277) 1 NC_007614.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2673277 groES 3784749 groES Nitrosospira multiformis ATCC 25196 co-chaperonin GroES YP_413028.1 2672987 R 323848 CDS YP_413029.1 82703463 3784750 2673587..2673994 1 NC_007614.1 hypothetical protein 2673994 3784750 Nmul_A2346 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413029.1 2673587 D 323848 CDS YP_413030.1 82703464 3784751 complement(2674007..2674354) 1 NC_007614.1 transposase IS4 2674354 3784751 Nmul_A2347 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_413030.1 2674007 R 323848 CDS YP_413031.1 82703465 3784752 complement(2674396..2674764) 1 NC_007614.1 transposase 2674764 3784752 Nmul_A2348 Nitrosospira multiformis ATCC 25196 transposase YP_413031.1 2674396 R 323848 CDS YP_413032.1 82703466 3784753 2675302..2675922 1 NC_007614.1 hypothetical protein 2675922 3784753 Nmul_A2349 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413032.1 2675302 D 323848 CDS YP_413033.1 82703467 3784754 2676138..2677574 1 NC_007614.1 ATPase 2677574 3784754 Nmul_A2350 Nitrosospira multiformis ATCC 25196 ATPase YP_413033.1 2676138 D 323848 CDS YP_413034.1 82703468 3784755 complement(2677720..2678907) 1 NC_007614.1 hypothetical protein 2678907 3784755 Nmul_A2351 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413034.1 2677720 R 323848 CDS YP_413035.1 82703469 3785289 complement(2678925..2679866) 1 NC_007614.1 type II secretion system protein 2679866 3785289 Nmul_A2352 Nitrosospira multiformis ATCC 25196 type II secretion system protein YP_413035.1 2678925 R 323848 CDS YP_413036.1 82703470 3785290 complement(2679909..2680880) 1 NC_007614.1 type II secretion system protein 2680880 3785290 Nmul_A2353 Nitrosospira multiformis ATCC 25196 type II secretion system protein YP_413036.1 2679909 R 323848 CDS YP_413037.1 82703471 3785291 complement(2680898..2682256) 1 NC_007614.1 type II secretion system protein E 2682256 3785291 Nmul_A2354 Nitrosospira multiformis ATCC 25196 type II secretion system protein E YP_413037.1 2680898 R 323848 CDS YP_413038.1 82703472 3785292 complement(2682285..2683523) 1 NC_007614.1 response regulator receiver domain-containing protein 2683523 3785292 Nmul_A2355 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_413038.1 2682285 R 323848 CDS YP_413039.1 82703473 3785293 complement(2683535..2683972) 1 NC_007614.1 TadE-like protein 2683972 3785293 Nmul_A2356 Nitrosospira multiformis ATCC 25196 TadE-like protein YP_413039.1 2683535 R 323848 CDS YP_413040.1 82703474 3785294 complement(2683996..2684553) 1 NC_007614.1 TadE-like protein 2684553 3785294 Nmul_A2357 Nitrosospira multiformis ATCC 25196 TadE-like protein YP_413040.1 2683996 R 323848 CDS YP_413041.1 82703475 3785295 complement(2684550..2685863) 1 NC_007614.1 hypothetical protein 2685863 3785295 Nmul_A2358 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413041.1 2684550 R 323848 CDS YP_413042.1 82703476 3785296 complement(2685917..2686306) 1 NC_007614.1 hypothetical protein 2686306 3785296 Nmul_A2359 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413042.1 2685917 R 323848 CDS YP_413043.1 82703477 3785297 complement(2686314..2688038) 1 NC_007614.1 type II and III secretion system protein 2688038 3785297 Nmul_A2360 Nitrosospira multiformis ATCC 25196 type II and III secretion system protein YP_413043.1 2686314 R 323848 CDS YP_413044.1 82703478 3785298 complement(2688035..2688820) 1 NC_007614.1 Flp pilus assembly CpaB 2688820 3785298 Nmul_A2361 Nitrosospira multiformis ATCC 25196 Flp pilus assembly CpaB YP_413044.1 2688035 R 323848 CDS YP_413045.1 82703479 3785299 complement(2689092..2689676) 1 NC_007614.1 peptidase A24A, prepilin type IV 2689676 3785299 Nmul_A2362 Nitrosospira multiformis ATCC 25196 peptidase A24A, prepilin type IV YP_413045.1 2689092 R 323848 CDS YP_413046.1 82703480 3785300 complement(2689813..2689995) 1 NC_007614.1 Flp/Fap pilin component 2689995 3785300 Nmul_A2363 Nitrosospira multiformis ATCC 25196 Flp/Fap pilin component YP_413046.1 2689813 R 323848 CDS YP_413047.1 82703481 3785301 2690662..2691984 1 NC_007614.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2691984 3785301 Nmul_A2364 Nitrosospira multiformis ATCC 25196 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_413047.1 2690662 D 323848 CDS YP_413048.1 82703482 3785304 2692495..2694141 1 NC_007614.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2694141 3785304 Nmul_A2367 Nitrosospira multiformis ATCC 25196 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_413048.1 2692495 D 323848 CDS YP_413049.1 82703483 3785305 2694402..2694902 1 NC_007614.1 HNH nuclease 2694902 3785305 Nmul_A2368 Nitrosospira multiformis ATCC 25196 HNH nuclease YP_413049.1 2694402 D 323848 CDS YP_413050.1 82703484 3785306 complement(2695012..2696493) 1 NC_007614.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2696493 3785306 Nmul_A2369 Nitrosospira multiformis ATCC 25196 anthranilate synthase component I YP_413050.1 2695012 R 323848 CDS YP_413051.1 82703485 3785307 complement(2696634..2697317) 1 NC_007614.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 2697317 3785307 Nmul_A2370 Nitrosospira multiformis ATCC 25196 phosphoglycolate phosphatase YP_413051.1 2696634 R 323848 CDS YP_413052.1 82703486 3785308 complement(2697477..2698160) 1 NC_007614.1 ribulose-phosphate 3-epimerase 2698160 3785308 Nmul_A2371 Nitrosospira multiformis ATCC 25196 ribulose-phosphate 3-epimerase YP_413052.1 2697477 R 323848 CDS YP_413053.1 82703487 3784963 2698347..2698730 1 NC_007614.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 2698730 apaG 3784963 apaG Nitrosospira multiformis ATCC 25196 ApaG protein YP_413053.1 2698347 D 323848 CDS YP_413054.1 82703488 3784964 complement(2698751..2700151) 1 NC_007614.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2700151 engA 3784964 engA Nitrosospira multiformis ATCC 25196 GTP-binding protein EngA YP_413054.1 2698751 R 323848 CDS YP_413055.1 82703489 3784965 complement(2700290..2701642) 1 NC_007614.1 Pyrrolo-quinoline quinone 2701642 3784965 Nmul_A2374 Nitrosospira multiformis ATCC 25196 Pyrrolo-quinoline quinone YP_413055.1 2700290 R 323848 CDS YP_413056.1 82703490 3784966 complement(2701797..2702435) 1 NC_007614.1 hypothetical protein 2702435 3784966 Nmul_A2375 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413056.1 2701797 R 323848 CDS YP_413057.1 82703491 3784967 complement(2702469..2703728) 1 NC_007614.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2703728 hisS 3784967 hisS Nitrosospira multiformis ATCC 25196 histidyl-tRNA synthetase YP_413057.1 2702469 R 323848 CDS YP_413058.1 82703492 3784968 complement(2703718..2704968) 1 NC_007614.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2704968 ispG 3784968 ispG Nitrosospira multiformis ATCC 25196 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_413058.1 2703718 R 323848 CDS YP_413059.1 82703493 3784969 complement(2705002..2706348) 1 NC_007614.1 hypothetical protein 2706348 3784969 Nmul_A2378 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413059.1 2705002 R 323848 CDS YP_413060.1 82703494 3784970 complement(2706455..2707552) 1 NC_007614.1 hypothetical protein 2707552 3784970 Nmul_A2379 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413060.1 2706455 R 323848 CDS YP_413061.1 82703495 3784971 complement(2707572..2707997) 1 NC_007614.1 nucleoside-diphosphate kinase 2707997 3784971 Nmul_A2380 Nitrosospira multiformis ATCC 25196 nucleoside-diphosphate kinase YP_413061.1 2707572 R 323848 CDS YP_413062.1 82703496 3784972 complement(2708164..2710272) 1 NC_007614.1 peptidase M1, membrane alanine aminopeptidase 2710272 3784972 Nmul_A2381 Nitrosospira multiformis ATCC 25196 peptidase M1, membrane alanine aminopeptidase YP_413062.1 2708164 R 323848 CDS YP_413063.1 82703497 3784973 complement(2710311..2711621) 1 NC_007614.1 hypothetical protein 2711621 3784973 Nmul_A2382 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413063.1 2710311 R 323848 CDS YP_413064.1 82703498 3784974 complement(2711737..2715648) 1 NC_007614.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 2715648 3784974 Nmul_A2383 Nitrosospira multiformis ATCC 25196 phosphoribosylformylglycinamidine synthase YP_413064.1 2711737 R 323848 CDS YP_413065.1 82703499 3784975 2715871..2717439 1 NC_007614.1 hypothetical protein 2717439 3784975 Nmul_A2384 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413065.1 2715871 D 323848 CDS YP_413066.1 82703500 3784976 complement(2717611..2718024) 1 NC_007614.1 response regulator receiver domain-containing protein 2718024 3784976 Nmul_A2385 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_413066.1 2717611 R 323848 CDS YP_413067.1 82703501 3784977 2718348..2719154 1 NC_007614.1 Crp/FNR family transcriptional regulator 2719154 3784977 Nmul_A2386 Nitrosospira multiformis ATCC 25196 Crp/FNR family transcriptional regulator YP_413067.1 2718348 D 323848 CDS YP_413068.1 82703502 3784978 2719691..2720293 1 NC_007614.1 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2720293 3784978 Nmul_A2387 Nitrosospira multiformis ATCC 25196 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_413068.1 2719691 D 323848 CDS YP_413069.1 82703503 3784979 2720350..2720811 1 NC_007614.1 Ferritin and Dps 2720811 3784979 Nmul_A2388 Nitrosospira multiformis ATCC 25196 Ferritin and Dps YP_413069.1 2720350 D 323848 CDS YP_413070.1 82703504 3784980 complement(2721464..2721913) 1 NC_007614.1 hypothetical protein 2721913 3784980 Nmul_A2389 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413070.1 2721464 R 323848 CDS YP_413071.1 82703505 3784981 complement(2721910..2722521) 1 NC_007614.1 autoinducer synthesis protein 2722521 3784981 Nmul_A2390 Nitrosospira multiformis ATCC 25196 autoinducer synthesis protein YP_413071.1 2721910 R 323848 CDS YP_413072.1 82703506 3786172 complement(2723216..2725504) 1 NC_007614.1 TonB-dependent receptor 2725504 3786172 Nmul_A2391 Nitrosospira multiformis ATCC 25196 TonB-dependent receptor YP_413072.1 2723216 R 323848 CDS YP_413073.1 82703507 3786173 complement(2725661..2726437) 1 NC_007614.1 PepSY-associated TM helix-containing protein 2726437 3786173 Nmul_A2392 Nitrosospira multiformis ATCC 25196 PepSY-associated TM helix-containing protein YP_413073.1 2725661 R 323848 CDS YP_413074.1 82703508 3786174 complement(2726434..2727093) 1 NC_007614.1 hypothetical protein 2727093 3786174 Nmul_A2393 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413074.1 2726434 R 323848 CDS YP_413075.1 82703509 3786175 complement(2727164..2728201) 1 NC_007614.1 ferroxidase 2728201 3786175 Nmul_A2394 Nitrosospira multiformis ATCC 25196 ferroxidase YP_413075.1 2727164 R 323848 CDS YP_413076.1 82703510 3786176 complement(2728254..2729156) 1 NC_007614.1 hypothetical protein 2729156 3786176 Nmul_A2395 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413076.1 2728254 R 323848 CDS YP_413077.1 82703511 3786177 complement(2729290..2729754) 1 NC_007614.1 bacterioferritin 2729754 3786177 Nmul_A2396 Nitrosospira multiformis ATCC 25196 bacterioferritin YP_413077.1 2729290 R 323848 CDS YP_413078.1 82703512 3786178 2730545..2731366 1 NC_007614.1 hypothetical protein 2731366 3786178 Nmul_A2397 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413078.1 2730545 D 323848 CDS YP_413079.1 82703513 3786179 2731356..2732822 1 NC_007614.1 ABC transporter-like protein 2732822 3786179 Nmul_A2398 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_413079.1 2731356 D 323848 CDS YP_413080.1 82703514 3786180 2732866..2735856 1 NC_007614.1 group 1 glycosyl transferase 2735856 3786180 Nmul_A2399 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_413080.1 2732866 D 323848 CDS YP_413081.1 82703515 3786181 2735853..2737211 1 NC_007614.1 group 1 glycosyl transferase 2737211 3786181 Nmul_A2400 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_413081.1 2735853 D 323848 CDS YP_413082.1 82703516 3786182 2737232..2738098 1 NC_007614.1 hypothetical protein 2738098 3786182 Nmul_A2401 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413082.1 2737232 D 323848 CDS YP_413083.1 82703517 3786183 2738414..2739202 1 NC_007614.1 hypothetical protein 2739202 3786183 Nmul_A2402 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413083.1 2738414 D 323848 CDS YP_413084.1 82703518 3786184 2739236..2741722 1 NC_007614.1 group 1 glycosyl transferase 2741722 3786184 Nmul_A2403 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_413084.1 2739236 D 323848 CDS YP_413085.1 82703519 3786185 2741733..2742656 1 NC_007614.1 NAD-dependent epimerase/dehydratase 2742656 3786185 Nmul_A2404 Nitrosospira multiformis ATCC 25196 NAD-dependent epimerase/dehydratase YP_413085.1 2741733 D 323848 CDS YP_413086.1 82703520 3786186 complement(2742706..2743551) 1 NC_007614.1 integrase catalytic subunit 2743551 3786186 Nmul_A2405 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_413086.1 2742706 R 323848 CDS YP_413087.1 82703521 3786187 complement(2743548..2743973) 1 NC_007614.1 transposase IS3/IS911 2743973 3786187 Nmul_A2406 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_413087.1 2743548 R 323848 CDS YP_413088.1 82703522 3786188 2743984..2744922 1 NC_007614.1 glycosyl transferase family protein 2744922 3786188 Nmul_A2407 Nitrosospira multiformis ATCC 25196 glycosyl transferase family protein YP_413088.1 2743984 D 323848 CDS YP_413089.1 82703523 3786189 2745019..2745912 1 NC_007614.1 NAD-dependent epimerase/dehydratase 2745912 3786189 Nmul_A2408 Nitrosospira multiformis ATCC 25196 NAD-dependent epimerase/dehydratase YP_413089.1 2745019 D 323848 CDS YP_413090.1 82703524 3786190 2745912..2746334 1 NC_007614.1 class I peptide chain release factor 2746334 3786190 Nmul_A2409 Nitrosospira multiformis ATCC 25196 class I peptide chain release factor YP_413090.1 2745912 D 323848 CDS YP_413091.1 82703525 3786191 complement(2746403..2747938) 1 NC_007614.1 periplasmic sensor signal transduction histidine kinase 2747938 3786191 Nmul_A2410 Nitrosospira multiformis ATCC 25196 periplasmic sensor signal transduction histidine kinase YP_413091.1 2746403 R 323848 CDS YP_413092.1 82703526 3785503 complement(2747964..2748425) 1 NC_007614.1 response regulator receiver domain-containing protein 2748425 3785503 Nmul_A2411 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_413092.1 2747964 R 323848 CDS YP_413093.1 82703527 3785504 complement(2748633..2749316) 1 NC_007614.1 phospholipase/carboxylesterase 2749316 3785504 Nmul_A2412 Nitrosospira multiformis ATCC 25196 phospholipase/carboxylesterase YP_413093.1 2748633 R 323848 CDS YP_413094.1 82703528 3785505 2749415..2750524 1 NC_007614.1 transglutaminase-like protein 2750524 3785505 Nmul_A2413 Nitrosospira multiformis ATCC 25196 transglutaminase-like protein YP_413094.1 2749415 D 323848 CDS YP_413095.1 82703529 3785506 complement(2750575..2751123) 1 NC_007614.1 hypothetical protein 2751123 3785506 Nmul_A2414 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413095.1 2750575 R 323848 CDS YP_413096.1 82703530 3785507 2751284..2752642 1 NC_007614.1 peptidase U62, modulator of DNA gyrase 2752642 3785507 Nmul_A2415 Nitrosospira multiformis ATCC 25196 peptidase U62, modulator of DNA gyrase YP_413096.1 2751284 D 323848 CDS YP_413097.1 82703531 3785508 2752821..2753867 1 NC_007614.1 hypothetical protein 2753867 3785508 Nmul_A2416 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413097.1 2752821 D 323848 CDS YP_413098.1 82703532 3785509 2754330..2755064 1 NC_007614.1 LuxR family transcriptional regulator 2755064 3785509 Nmul_A2417 Nitrosospira multiformis ATCC 25196 LuxR family transcriptional regulator YP_413098.1 2754330 D 323848 CDS YP_413099.1 82703533 3785510 complement(2755156..2755989) 1 NC_007614.1 exodeoxyribonuclease III 2755989 3785510 Nmul_A2418 Nitrosospira multiformis ATCC 25196 exodeoxyribonuclease III YP_413099.1 2755156 R 323848 CDS YP_413100.1 82703534 3785511 2756252..2756827 1 NC_007614.1 GTP cyclohydrolase I 2756827 3785511 Nmul_A2419 Nitrosospira multiformis ATCC 25196 GTP cyclohydrolase I YP_413100.1 2756252 D 323848 CDS YP_413101.1 82703535 3785512 2757022..2757915 1 NC_007614.1 hypothetical protein 2757915 3785512 Nmul_A2420 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413101.1 2757022 D 323848 CDS YP_413102.1 82703536 3785513 complement(2758061..2759752) 1 NC_007614.1 DNA repair protein RecN 2759752 3785513 Nmul_A2421 Nitrosospira multiformis ATCC 25196 DNA repair protein RecN YP_413102.1 2758061 R 323848 CDS YP_413103.1 82703537 3785514 complement(2759769..2760653) 1 NC_007614.1 catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 2760653 ppnK 3785514 ppnK Nitrosospira multiformis ATCC 25196 NAD(+)/NADH kinase family protein YP_413103.1 2759769 R 323848 CDS YP_413104.1 82703538 3785515 2760908..2761927 1 NC_007614.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 2761927 hrcA 3785515 hrcA Nitrosospira multiformis ATCC 25196 heat-inducible transcription repressor YP_413104.1 2760908 D 323848 CDS YP_413105.1 82703539 3785516 2761954..2763066 1 NC_007614.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 2763066 hemH 3785516 hemH Nitrosospira multiformis ATCC 25196 ferrochelatase YP_413105.1 2761954 D 323848 CDS YP_413106.1 82703540 3785517 complement(2763145..2763933) 1 NC_007614.1 hypothetical protein 2763933 3785517 Nmul_A2425 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413106.1 2763145 R 323848 CDS YP_413107.1 82703541 3785518 complement(2763872..2764804) 1 NC_007614.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 2764804 secF 3785518 secF Nitrosospira multiformis ATCC 25196 preprotein translocase subunit SecF YP_413107.1 2763872 R 323848 CDS YP_413108.1 82703542 3785519 complement(2764848..2766692) 1 NC_007614.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 2766692 secD 3785519 secD Nitrosospira multiformis ATCC 25196 preprotein translocase subunit SecD YP_413108.1 2764848 R 323848 CDS YP_413109.1 82703543 3785520 complement(2766762..2766947) 1 NC_007614.1 preprotein translocase YajC subunit 2766947 3785520 Nmul_A2428 Nitrosospira multiformis ATCC 25196 preprotein translocase YajC subunit YP_413109.1 2766762 R 323848 CDS YP_413110.1 82703544 3785521 complement(2767140..2768243) 1 NC_007614.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2768243 tgt 3785521 tgt Nitrosospira multiformis ATCC 25196 queuine tRNA-ribosyltransferase YP_413110.1 2767140 R 323848 CDS YP_413111.1 82703545 3784124 complement(2768362..2769432) 1 NC_007614.1 S-adenosylmethionine 2769432 3784124 Nmul_A2430 Nitrosospira multiformis ATCC 25196 S-adenosylmethionine YP_413111.1 2768362 R 323848 CDS YP_413112.1 82703546 3784126 complement(2770075..2770572) 1 NC_007614.1 hypothetical protein 2770572 3784126 Nmul_A2431 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413112.1 2770075 R 323848 CDS YP_413113.1 82703547 3784127 complement(2770980..2773799) 1 NC_007614.1 putative signal peptide protein 2773799 3784127 Nmul_A2432 Nitrosospira multiformis ATCC 25196 putative signal peptide protein YP_413113.1 2770980 R 323848 CDS YP_413114.1 82703548 3784128 complement(2774110..2775477) 1 NC_007614.1 hypothetical protein 2775477 3784128 Nmul_A2433 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413114.1 2774110 R 323848 CDS YP_413115.1 82703549 3784129 complement(2775715..2777226) 1 NC_007614.1 group 1 glycosyl transferase 2777226 3784129 Nmul_A2434 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_413115.1 2775715 R 323848 CDS YP_413116.1 82703550 3784130 complement(2777226..2778245) 1 NC_007614.1 hypothetical protein 2778245 3784130 Nmul_A2435 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413116.1 2777226 R 323848 CDS YP_413117.1 82703551 3784131 complement(2778230..2779624) 1 NC_007614.1 hypothetical protein 2779624 3784131 Nmul_A2436 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413117.1 2778230 R 323848 CDS YP_413118.1 82703552 3784132 complement(2779637..2780206) 1 NC_007614.1 putative lipoprotein 2780206 3784132 Nmul_A2437 Nitrosospira multiformis ATCC 25196 putative lipoprotein YP_413118.1 2779637 R 323848 CDS YP_413119.1 82703553 3784133 complement(2781045..2782493) 1 NC_007614.1 hypothetical protein 2782493 3784133 Nmul_A2438 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413119.1 2781045 R 323848 CDS YP_413120.1 82703554 3784134 2783081..2785216 1 NC_007614.1 hypothetical protein 2785216 3784134 Nmul_A2439 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413120.1 2783081 D 323848 CDS YP_413121.1 82703555 3784135 2785274..2785693 1 NC_007614.1 hypothetical protein 2785693 3784135 Nmul_A2440 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413121.1 2785274 D 323848 CDS YP_413122.1 82703556 3784136 complement(2785927..2789499) 1 NC_007614.1 hypothetical protein 2789499 3784136 Nmul_A2441 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413122.1 2785927 R 323848 CDS YP_413123.1 82703557 3784137 2790402..2791157 1 NC_007614.1 hypothetical protein 2791157 3784137 Nmul_A2442 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413123.1 2790402 D 323848 CDS YP_413124.1 82703558 3784138 complement(2791344..2791574) 1 NC_007614.1 ChaB 2791574 3784138 Nmul_A2443 Nitrosospira multiformis ATCC 25196 ChaB YP_413124.1 2791344 R 323848 CDS YP_413125.1 82703559 3784140 2792058..2793227 1 NC_007614.1 ubiquinone biosynthesis hydroxylase family protein 2793227 3784140 Nmul_A2444 Nitrosospira multiformis ATCC 25196 ubiquinone biosynthesis hydroxylase family protein YP_413125.1 2792058 D 323848 CDS YP_413126.1 82703560 3784141 2793326..2794045 1 NC_007614.1 putative thiol:disulfide interchange protein 2794045 3784141 Nmul_A2445 Nitrosospira multiformis ATCC 25196 putative thiol:disulfide interchange protein YP_413126.1 2793326 D 323848 CDS YP_413127.1 82703561 3786403 complement(2794097..2795290) 1 NC_007614.1 MltA 2795290 3786403 Nmul_A2446 Nitrosospira multiformis ATCC 25196 MltA YP_413127.1 2794097 R 323848 CDS YP_413128.1 82703562 3786404 2795836..2797179 1 NC_007614.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 2797179 3786404 Nmul_A2447 Nitrosospira multiformis ATCC 25196 glutamate dehydrogenase YP_413128.1 2795836 D 323848 CDS YP_413129.1 82703563 3786405 complement(2797284..2798642) 1 NC_007614.1 aldehyde dehydrogenase 2798642 3786405 Nmul_A2448 Nitrosospira multiformis ATCC 25196 aldehyde dehydrogenase YP_413129.1 2797284 R 323848 CDS YP_413130.1 82703564 3786406 2798779..2800713 1 NC_007614.1 lytic transglycosylase catalytic subunit 2800713 3786406 Nmul_A2449 Nitrosospira multiformis ATCC 25196 lytic transglycosylase catalytic subunit YP_413130.1 2798779 D 323848 CDS YP_413131.1 82703565 3786407 2800724..2801662 1 NC_007614.1 NAD-dependent epimerase/dehydratase 2801662 3786407 Nmul_A2450 Nitrosospira multiformis ATCC 25196 NAD-dependent epimerase/dehydratase YP_413131.1 2800724 D 323848 CDS YP_413132.1 82703566 3786408 2801689..2802930 1 NC_007614.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 2802930 cca 3786408 cca Nitrosospira multiformis ATCC 25196 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_413132.1 2801689 D 323848 CDS YP_413133.1 82703567 3786409 complement(2803016..2803492) 1 NC_007614.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 2803492 3786409 Nmul_A2452 Nitrosospira multiformis ATCC 25196 methionine sulfoxide reductase A YP_413133.1 2803016 R 323848 CDS YP_413134.1 82703568 3786410 complement(2803600..2804385) 1 NC_007614.1 short chain dehydrogenase 2804385 3786410 Nmul_A2453 Nitrosospira multiformis ATCC 25196 short chain dehydrogenase YP_413134.1 2803600 R 323848 CDS YP_413135.1 82703569 3786411 complement(2804395..2805042) 1 NC_007614.1 DSBA oxidoreductase 2805042 3786411 Nmul_A2454 Nitrosospira multiformis ATCC 25196 DSBA oxidoreductase YP_413135.1 2804395 R 323848 CDS YP_413136.1 82703570 3786412 complement(2805126..2805659) 1 NC_007614.1 sporulation related 2805659 3786412 Nmul_A2455 Nitrosospira multiformis ATCC 25196 sporulation related YP_413136.1 2805126 R 323848 CDS YP_413137.1 82703571 3786413 complement(2805737..2807533) 1 NC_007614.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2807533 argS 3786413 argS Nitrosospira multiformis ATCC 25196 arginyl-tRNA synthetase YP_413137.1 2805737 R 323848 CDS YP_413138.1 82703572 3786414 complement(2807579..2808403) 1 NC_007614.1 hypothetical protein 2808403 3786414 Nmul_A2457 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413138.1 2807579 R 323848 CDS YP_413139.1 82703573 3786415 complement(2808403..2808750) 1 NC_007614.1 transposase IS4 2808750 3786415 Nmul_A2458 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_413139.1 2808403 R 323848 CDS YP_413140.1 82703574 3786416 complement(2808792..2809160) 1 NC_007614.1 transposase 2809160 3786416 Nmul_A2459 Nitrosospira multiformis ATCC 25196 transposase YP_413140.1 2808792 R 323848 CDS YP_413141.1 82703575 3786417 complement(2809216..2809461) 1 NC_007614.1 hypothetical protein 2809461 3786417 Nmul_A2460 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413141.1 2809216 R 323848 CDS YP_413142.1 82703576 3786418 complement(2809540..2810769) 1 NC_007614.1 hypothetical protein 2810769 3786418 Nmul_A2461 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413142.1 2809540 R 323848 CDS YP_413143.1 82703577 3786419 2810976..2812091 1 NC_007614.1 rhomboid-like protein 2812091 3786419 Nmul_A2462 Nitrosospira multiformis ATCC 25196 rhomboid-like protein YP_413143.1 2810976 D 323848 CDS YP_413144.1 82703578 3786420 2812305..2813078 1 NC_007614.1 hypothetical protein 2813078 3786420 Nmul_A2463 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413144.1 2812305 D 323848 CDS YP_413145.1 82703579 3786421 2813332..2814252 1 NC_007614.1 hypothetical protein 2814252 3786421 Nmul_A2464 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413145.1 2813332 D 323848 CDS YP_413146.1 82703580 3784814 complement(2814268..2816244) 1 NC_007614.1 ParB-like nuclease 2816244 3784814 Nmul_A2465 Nitrosospira multiformis ATCC 25196 ParB-like nuclease YP_413146.1 2814268 R 323848 CDS YP_413147.1 82703581 3784815 complement(2817365..2817778) 1 NC_007614.1 hypothetical protein 2817778 3784815 Nmul_A2466 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413147.1 2817365 R 323848 CDS YP_413148.1 82703582 3784816 2818394..2819221 1 NC_007614.1 ammonia monooxygenase/methane monooxygenase subunit C 2819221 3784816 Nmul_A2467 Nitrosospira multiformis ATCC 25196 ammonia monooxygenase/methane monooxygenase subunit C YP_413148.1 2818394 D 323848 CDS YP_413149.1 82703583 3784817 2819668..2822538 1 NC_007614.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2822538 3784817 Nmul_A2468 Nitrosospira multiformis ATCC 25196 ribonucleotide-diphosphate reductase subunit alpha YP_413149.1 2819668 D 323848 CDS YP_413150.1 82703584 3784818 2822568..2823794 1 NC_007614.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 2823794 3784818 Nmul_A2469 Nitrosospira multiformis ATCC 25196 ribonucleotide-diphosphate reductase subunit beta YP_413150.1 2822568 D 323848 CDS YP_413151.1 82703585 3784819 2824032..2824322 1 NC_007614.1 hypothetical protein 2824322 3784819 Nmul_A2470 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413151.1 2824032 D 323848 CDS YP_413152.1 82703586 3784820 2824597..2825985 1 NC_007614.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2825985 fumC 3784820 fumC Nitrosospira multiformis ATCC 25196 fumarate hydratase YP_413152.1 2824597 D 323848 CDS YP_413153.1 82703587 3784821 2826044..2827270 1 NC_007614.1 patatin 2827270 3784821 Nmul_A2472 Nitrosospira multiformis ATCC 25196 patatin YP_413153.1 2826044 D 323848 CDS YP_413154.1 82703588 3784822 2827317..2828048 1 NC_007614.1 integral membrane protein TerC 2828048 3784822 Nmul_A2473 Nitrosospira multiformis ATCC 25196 integral membrane protein TerC YP_413154.1 2827317 D 323848 CDS YP_413155.1 82703589 3784823 2828079..2828504 1 NC_007614.1 hypothetical protein 2828504 3784823 Nmul_A2474 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413155.1 2828079 D 323848 CDS YP_413156.1 82703590 3784824 2828529..2829047 1 NC_007614.1 N-terminal methylation site 2829047 3784824 Nmul_A2475 Nitrosospira multiformis ATCC 25196 N-terminal methylation site YP_413156.1 2828529 D 323848 CDS YP_413157.1 82703591 3784825 2829594..2830043 1 NC_007614.1 hypothetical protein 2830043 3784825 Nmul_A2476 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413157.1 2829594 D 323848 CDS YP_413158.1 82703592 3784826 complement(2830031..2830495) 1 NC_007614.1 hypothetical protein 2830495 3784826 Nmul_A2477 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413158.1 2830031 R 323848 CDS YP_413159.1 82703593 3784827 2830698..2831258 1 NC_007614.1 hypothetical protein 2831258 3784827 Nmul_A2478 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413159.1 2830698 D 323848 CDS YP_413160.1 82703594 3784828 2831332..2831787 1 NC_007614.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 2831787 3784828 Nmul_A2479 Nitrosospira multiformis ATCC 25196 Holliday junction resolvase-like protein YP_413160.1 2831332 D 323848 CDS YP_413161.1 82703595 3784829 2831774..2832283 1 NC_007614.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 2832283 3784829 Nmul_A2480 Nitrosospira multiformis ATCC 25196 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_413161.1 2831774 D 323848 CDS YP_413162.1 82703596 3784830 2832276..2833226 1 NC_007614.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2833226 pyrB 3784830 pyrB Nitrosospira multiformis ATCC 25196 aspartate carbamoyltransferase catalytic subunit YP_413162.1 2832276 D 323848 CDS YP_413163.1 82703597 3784831 2833232..2834506 1 NC_007614.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 2834506 3784831 Nmul_A2482 Nitrosospira multiformis ATCC 25196 dihydroorotase YP_413163.1 2833232 D 323848 CDS YP_413164.1 82703598 3784832 2834567..2836678 1 NC_007614.1 oligopeptidase A 2836678 3784832 Nmul_A2483 Nitrosospira multiformis ATCC 25196 oligopeptidase A YP_413164.1 2834567 D 323848 CDS YP_413165.1 82703599 3784833 2836881..2837447 1 NC_007614.1 hypothetical protein 2837447 3784833 Nmul_A2484 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413165.1 2836881 D 323848 CDS YP_413166.1 82703600 3786744 complement(2837779..2840532) 1 NC_007614.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 2840532 3786744 Nmul_A2485 Nitrosospira multiformis ATCC 25196 preprotein translocase subunit SecA YP_413166.1 2837779 R 323848 CDS YP_413167.1 82703601 3786745 complement(2840623..2841540) 1 NC_007614.1 peptidase M23B 2841540 3786745 Nmul_A2486 Nitrosospira multiformis ATCC 25196 peptidase M23B YP_413167.1 2840623 R 323848 CDS YP_413168.1 82703602 3786746 2841566..2842018 1 NC_007614.1 hypothetical protein 2842018 3786746 Nmul_A2487 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413168.1 2841566 D 323848 CDS YP_413169.1 82703603 3786747 complement(2842394..2843563) 1 NC_007614.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 2843563 3786747 Nmul_A2488 Nitrosospira multiformis ATCC 25196 cell division protein FtsZ YP_413169.1 2842394 R 323848 CDS YP_413170.1 82703604 3786748 complement(2843695..2844933) 1 NC_007614.1 cell division protein FtsA 2844933 3786748 Nmul_A2489 Nitrosospira multiformis ATCC 25196 cell division protein FtsA YP_413170.1 2843695 R 323848 CDS YP_413171.1 82703605 3786749 complement(2845013..2845723) 1 NC_007614.1 cell division protein FtsQ 2845723 3786749 Nmul_A2490 Nitrosospira multiformis ATCC 25196 cell division protein FtsQ YP_413171.1 2845013 R 323848 CDS YP_413172.1 82703606 3786750 complement(2845713..2846633) 1 NC_007614.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 2846633 ddl 3786750 ddl Nitrosospira multiformis ATCC 25196 D-alanine--D-alanine ligase YP_413172.1 2845713 R 323848 CDS YP_413173.1 82703607 3786751 complement(2846623..2847666) 1 NC_007614.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2847666 murB 3786751 murB Nitrosospira multiformis ATCC 25196 UDP-N-acetylenolpyruvoylglucosamine reductase YP_413173.1 2846623 R 323848 CDS YP_413174.1 82703608 3786752 complement(2847667..2849235) 1 NC_007614.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2849235 murC 3786752 murC Nitrosospira multiformis ATCC 25196 UDP-N-acetylmuramate--L-alanine ligase YP_413174.1 2847667 R 323848 CDS YP_413175.1 82703609 3786753 complement(2849211..2850284) 1 NC_007614.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 2850284 murG 3786753 murG Nitrosospira multiformis ATCC 25196 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_413175.1 2849211 R 323848 CDS YP_413176.1 82703610 3786754 complement(2850304..2851464) 1 NC_007614.1 cell cycle protein 2851464 3786754 Nmul_A2495 Nitrosospira multiformis ATCC 25196 cell cycle protein YP_413176.1 2850304 R 323848 CDS YP_413177.1 82703611 3786755 complement(2851469..2852890) 1 NC_007614.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2852890 murD 3786755 murD Nitrosospira multiformis ATCC 25196 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_413177.1 2851469 R 323848 CDS YP_413178.1 82703612 3786756 complement(2852901..2853995) 1 NC_007614.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2853995 mraY 3786756 mraY Nitrosospira multiformis ATCC 25196 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_413178.1 2852901 R 323848 CDS YP_413179.1 82703613 3786757 complement(2854075..2855424) 1 NC_007614.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 2855424 3786757 Nmul_A2498 Nitrosospira multiformis ATCC 25196 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_413179.1 2854075 R 323848 CDS YP_413180.1 82703614 3786758 complement(2855487..2857061) 1 NC_007614.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2857061 murE 3786758 murE Nitrosospira multiformis ATCC 25196 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_413180.1 2855487 R 323848 CDS YP_413181.1 82703615 3786759 complement(2857058..2858821) 1 NC_007614.1 peptidoglycan glycosyltransferase 2858821 3786759 Nmul_A2500 Nitrosospira multiformis ATCC 25196 peptidoglycan glycosyltransferase YP_413181.1 2857058 R 323848 CDS YP_413182.1 82703616 3786760 complement(2858818..2859135) 1 NC_007614.1 cell division protein, FtsL-like 2859135 3786760 Nmul_A2501 Nitrosospira multiformis ATCC 25196 cell division protein, FtsL-like YP_413182.1 2858818 R 323848 CDS YP_413183.1 82703617 3786761 complement(2859176..2860126) 1 NC_007614.1 S-adenosyl-methyltransferase MraW 2860126 mraW 3786761 mraW Nitrosospira multiformis ATCC 25196 S-adenosyl-methyltransferase MraW YP_413183.1 2859176 R 323848 CDS YP_413184.1 82703618 3786762 complement(2860130..2860573) 1 NC_007614.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 2860573 3786762 Nmul_A2503 Nitrosospira multiformis ATCC 25196 cell division protein MraZ YP_413184.1 2860130 R 323848 CDS YP_413185.1 82703619 3786629 2860745..2861377 1 NC_007614.1 hypothetical protein 2861377 3786629 Nmul_A2504 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413185.1 2860745 D 323848 CDS YP_413186.1 82703620 3786630 complement(2861406..2863595) 1 NC_007614.1 (p)ppGpp synthetase SpoT/RelA 2863595 3786630 Nmul_A2505 Nitrosospira multiformis ATCC 25196 (p)ppGpp synthetase SpoT/RelA YP_413186.1 2861406 R 323848 CDS YP_413187.1 82703621 3786631 complement(2863682..2865982) 1 NC_007614.1 DNA internalization-related competence protein ComEC/Rec2 2865982 3786631 Nmul_A2506 Nitrosospira multiformis ATCC 25196 DNA internalization-related competence protein ComEC/Rec2 YP_413187.1 2863682 R 323848 CDS YP_413188.1 82703622 3786632 2866347..2866943 1 NC_007614.1 hypothetical protein 2866943 3786632 Nmul_A2507 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413188.1 2866347 D 323848 CDS YP_413189.1 82703623 3786633 complement(2867053..2867730) 1 NC_007614.1 lipoprotein releasing system, ATP-binding protein 2867730 3786633 Nmul_A2508 Nitrosospira multiformis ATCC 25196 lipoprotein releasing system, ATP-binding protein YP_413189.1 2867053 R 323848 CDS YP_413190.1 82703624 3786634 complement(2867723..2868967) 1 NC_007614.1 LolC/E family lipoprotein releasing system, transmembrane protein 2868967 3786634 Nmul_A2509 Nitrosospira multiformis ATCC 25196 LolC/E family lipoprotein releasing system, transmembrane protein YP_413190.1 2867723 R 323848 CDS YP_413191.1 82703625 3786635 complement(2869133..2871202) 1 NC_007614.1 TonB-dependent receptor 2871202 3786635 Nmul_A2510 Nitrosospira multiformis ATCC 25196 TonB-dependent receptor YP_413191.1 2869133 R 323848 CDS YP_413192.1 82703626 3786636 complement(2871411..2871818) 1 NC_007614.1 hypothetical protein 2871818 3786636 Nmul_A2511 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413192.1 2871411 R 323848 CDS YP_413193.1 82703627 3786637 complement(2871855..2872460) 1 NC_007614.1 ferric uptake regulator family protein 2872460 3786637 Nmul_A2512 Nitrosospira multiformis ATCC 25196 ferric uptake regulator family protein YP_413193.1 2871855 R 323848 CDS YP_413194.1 82703628 3786638 2872603..2873781 1 NC_007614.1 hypothetical protein 2873781 3786638 Nmul_A2513 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413194.1 2872603 D 323848 CDS YP_413195.1 82703629 3786639 2873841..2877200 1 NC_007614.1 VanZ like protein 2877200 3786639 Nmul_A2514 Nitrosospira multiformis ATCC 25196 VanZ like protein YP_413195.1 2873841 D 323848 CDS YP_413196.1 82703630 3786640 complement(2877278..2879119) 1 NC_007614.1 FkbH domain-containing protein 2879119 3786640 Nmul_A2515 Nitrosospira multiformis ATCC 25196 FkbH domain-containing protein YP_413196.1 2877278 R 323848 CDS YP_413197.1 82703631 3786641 complement(2879167..2879859) 1 NC_007614.1 methyltransferase 2879859 3786641 Nmul_A2516 Nitrosospira multiformis ATCC 25196 methyltransferase YP_413197.1 2879167 R 323848 CDS YP_413198.1 82703632 3786642 complement(2880051..2880992) 1 NC_007614.1 hypothetical protein 2880992 3786642 Nmul_A2517 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413198.1 2880051 R 323848 CDS YP_413199.1 82703633 3786643 complement(2880989..2881951) 1 NC_007614.1 hypothetical protein 2881951 3786643 Nmul_A2518 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413199.1 2880989 R 323848 CDS YP_413200.1 82703634 3786644 complement(2882092..2884035) 1 NC_007614.1 asparagine synthase 2884035 3786644 Nmul_A2519 Nitrosospira multiformis ATCC 25196 asparagine synthase YP_413200.1 2882092 R 323848 CDS YP_413201.1 82703635 3786645 complement(2884056..2885261) 1 NC_007614.1 group 1 glycosyl transferase 2885261 3786645 Nmul_A2520 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_413201.1 2884056 R 323848 CDS YP_413202.1 82703636 3786646 complement(2885245..2886834) 1 NC_007614.1 hypothetical protein 2886834 3786646 Nmul_A2521 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413202.1 2885245 R 323848 CDS YP_413203.1 82703637 3786647 complement(2886889..2888094) 1 NC_007614.1 group 1 glycosyl transferase 2888094 3786647 Nmul_A2522 Nitrosospira multiformis ATCC 25196 group 1 glycosyl transferase YP_413203.1 2886889 R 323848 CDS YP_413204.1 82703638 3786648 complement(2888099..2889184) 1 NC_007614.1 hypothetical protein 2889184 3786648 Nmul_A2523 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413204.1 2888099 R 323848 CDS YP_413205.1 82703639 3784029 complement(2889181..2890026) 1 NC_007614.1 polysaccharide deacetylase 2890026 3784029 Nmul_A2524 Nitrosospira multiformis ATCC 25196 polysaccharide deacetylase YP_413205.1 2889181 R 323848 CDS YP_413206.1 82703640 3784030 complement(2890152..2891156) 1 NC_007614.1 ATPase 2891156 3784030 Nmul_A2525 Nitrosospira multiformis ATCC 25196 ATPase YP_413206.1 2890152 R 323848 CDS YP_413207.1 82703641 3784031 complement(2891170..2892756) 1 NC_007614.1 hypothetical protein 2892756 3784031 Nmul_A2526 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413207.1 2891170 R 323848 CDS YP_413208.1 82703642 3784032 complement(2892839..2893636) 1 NC_007614.1 capsular polysaccharide biosynthesis-like protein 2893636 3784032 Nmul_A2527 Nitrosospira multiformis ATCC 25196 capsular polysaccharide biosynthesis-like protein YP_413208.1 2892839 R 323848 CDS YP_413209.1 82703643 3784033 complement(2893941..2895473) 1 NC_007614.1 lipopolysaccharide biosynthesis protein 2895473 3784033 Nmul_A2528 Nitrosospira multiformis ATCC 25196 lipopolysaccharide biosynthesis protein YP_413209.1 2893941 R 323848 CDS YP_413210.1 82703644 3784034 complement(2895812..2896438) 1 NC_007614.1 polysaccharide export protein 2896438 3784034 Nmul_A2529 Nitrosospira multiformis ATCC 25196 polysaccharide export protein YP_413210.1 2895812 R 323848 CDS YP_413211.1 82703645 3784035 complement(2896788..2897945) 1 NC_007614.1 4Fe-4S cluster binding 2897945 3784035 Nmul_A2530 Nitrosospira multiformis ATCC 25196 4Fe-4S cluster binding YP_413211.1 2896788 R 323848 CDS YP_413212.1 82703646 3784036 2897982..2898470 1 NC_007614.1 hypothetical protein 2898470 3784036 Nmul_A2531 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413212.1 2897982 D 323848 CDS YP_413213.1 82703647 3784037 2898467..2899837 1 NC_007614.1 N-acetylmuramoyl-L-alanine amidase 2899837 3784037 Nmul_A2532 Nitrosospira multiformis ATCC 25196 N-acetylmuramoyl-L-alanine amidase YP_413213.1 2898467 D 323848 CDS YP_413214.1 82703648 3784038 complement(2900050..2900589) 1 NC_007614.1 NUDIX hydrolase 2900589 3784038 Nmul_A2533 Nitrosospira multiformis ATCC 25196 NUDIX hydrolase YP_413214.1 2900050 R 323848 CDS YP_413215.1 82703649 3784039 complement(2900720..2901874) 1 NC_007614.1 hypothetical protein 2901874 3784039 Nmul_A2534 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413215.1 2900720 R 323848 CDS YP_413216.1 82703650 3784040 2901974..2903590 1 NC_007614.1 NAD+ synthetase 2903590 3784040 Nmul_A2535 Nitrosospira multiformis ATCC 25196 NAD+ synthetase YP_413216.1 2901974 D 323848 CDS YP_413217.1 82703651 3784041 2903723..2904061 1 NC_007614.1 nitrogen regulatory protein P-II (GlnB, GlnK) 2904061 3784041 Nmul_A2536 Nitrosospira multiformis ATCC 25196 nitrogen regulatory protein P-II (GlnB, GlnK) YP_413217.1 2903723 D 323848 CDS YP_413218.1 82703652 3784042 2904338..2905846 1 NC_007614.1 peptidase M48, Ste24p 2905846 3784042 Nmul_A2537 Nitrosospira multiformis ATCC 25196 peptidase M48, Ste24p YP_413218.1 2904338 D 323848 CDS YP_413219.1 82703653 3784043 2906048..2907289 1 NC_007614.1 Serine--pyruvate transaminase 2907289 3784043 Nmul_A2538 Nitrosospira multiformis ATCC 25196 Serine--pyruvate transaminase YP_413219.1 2906048 D 323848 CDS YP_413220.1 82703654 3784044 complement(2907499..2908344) 1 NC_007614.1 5,10-methylenetetrahydrofolate reductase 2908344 3784044 Nmul_A2539 Nitrosospira multiformis ATCC 25196 5,10-methylenetetrahydrofolate reductase YP_413220.1 2907499 R 323848 CDS YP_413221.1 82703655 3784045 complement(2908432..2909871) 1 NC_007614.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 2909871 3784045 Nmul_A2540 Nitrosospira multiformis ATCC 25196 S-adenosyl-L-homocysteine hydrolase YP_413221.1 2908432 R 323848 CDS YP_413222.1 82703656 3784046 complement(2909986..2911185) 1 NC_007614.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2911185 3784046 Nmul_A2541 Nitrosospira multiformis ATCC 25196 S-adenosylmethionine synthetase YP_413222.1 2909986 R 323848 CDS YP_413223.1 82703657 3784047 2911328..2912161 1 NC_007614.1 diaminopimelate epimerase 2912161 3784047 Nmul_A2542 Nitrosospira multiformis ATCC 25196 diaminopimelate epimerase YP_413223.1 2911328 D 323848 CDS YP_413224.1 82703658 3786269 2912136..2912834 1 NC_007614.1 hypothetical protein 2912834 3786269 Nmul_A2543 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413224.1 2912136 D 323848 CDS YP_413225.1 82703659 3786270 2912837..2913793 1 NC_007614.1 tyrosine recombinase XerC 2913793 3786270 Nmul_A2544 Nitrosospira multiformis ATCC 25196 tyrosine recombinase XerC YP_413225.1 2912837 D 323848 CDS YP_413226.1 82703660 3786271 2913840..2914430 1 NC_007614.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 2914430 3786271 Nmul_A2545 Nitrosospira multiformis ATCC 25196 ATP-dependent protease peptidase subunit YP_413226.1 2913840 D 323848 CDS YP_413227.1 82703661 3786272 2914557..2915888 1 NC_007614.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 2915888 hslU 3786272 hslU Nitrosospira multiformis ATCC 25196 ATP-dependent protease ATP-binding subunit HslU YP_413227.1 2914557 D 323848 CDS YP_413228.1 82703662 3786273 complement(2916261..2917445) 1 NC_007614.1 hypothetical protein 2917445 3786273 Nmul_A2547 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413228.1 2916261 R 323848 CDS YP_413229.1 82703663 3786274 complement(2917480..2918121) 1 NC_007614.1 thiopurine S-methyltransferase 2918121 3786274 Nmul_A2548 Nitrosospira multiformis ATCC 25196 thiopurine S-methyltransferase YP_413229.1 2917480 R 323848 CDS YP_413230.1 82703664 3786275 complement(2918194..2918949) 1 NC_007614.1 hypothetical protein 2918949 3786275 Nmul_A2549 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413230.1 2918194 R 323848 CDS YP_413231.1 82703665 3786276 complement(2918933..2919784) 1 NC_007614.1 hypothetical protein 2919784 3786276 Nmul_A2550 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413231.1 2918933 R 323848 CDS YP_413232.1 82703666 3786277 complement(2919791..2920204) 1 NC_007614.1 hypothetical protein 2920204 3786277 Nmul_A2551 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413232.1 2919791 R 323848 CDS YP_413233.1 82703667 3786278 2920647..2921069 1 NC_007614.1 TraR/DksA family transcriptional regulator 2921069 3786278 Nmul_A2552 Nitrosospira multiformis ATCC 25196 TraR/DksA family transcriptional regulator YP_413233.1 2920647 D 323848 CDS YP_413234.1 82703668 3786279 complement(2921307..2923412) 1 NC_007614.1 polynucleotide phosphorylase/polyadenylase 2923412 3786279 Nmul_A2553 Nitrosospira multiformis ATCC 25196 polynucleotide phosphorylase/polyadenylase YP_413234.1 2921307 R 323848 CDS YP_413235.1 82703669 3786280 complement(2923556..2923825) 1 NC_007614.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 2923825 rpsO 3786280 rpsO Nitrosospira multiformis ATCC 25196 30S ribosomal protein S15 YP_413235.1 2923556 R 323848 CDS YP_413236.1 82703670 3786281 complement(2923966..2924739) 1 NC_007614.1 purine phosphorylase family protein 1 2924739 3786281 Nmul_A2555 Nitrosospira multiformis ATCC 25196 purine phosphorylase family protein 1 YP_413236.1 2923966 R 323848 CDS YP_413237.1 82703671 3786282 complement(2924736..2926697) 1 NC_007614.1 squalene cyclase 2926697 3786282 Nmul_A2556 Nitrosospira multiformis ATCC 25196 squalene cyclase YP_413237.1 2924736 R 323848 CDS YP_413238.1 82703672 3786283 complement(2926902..2927684) 1 NC_007614.1 VacJ-like lipoprotein 2927684 3786283 Nmul_A2557 Nitrosospira multiformis ATCC 25196 VacJ-like lipoprotein YP_413238.1 2926902 R 323848 CDS YP_413239.1 82703673 3786284 complement(2927795..2930467) 1 NC_007614.1 hypothetical protein 2930467 3786284 Nmul_A2558 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413239.1 2927795 R 323848 CDS YP_413240.1 82703674 3786285 complement(2930881..2931564) 1 NC_007614.1 toluene tolerance 2931564 3786285 Nmul_A2559 Nitrosospira multiformis ATCC 25196 toluene tolerance YP_413240.1 2930881 R 323848 CDS YP_413241.1 82703675 3786286 complement(2931843..2932952) 1 NC_007614.1 radical SAM family protein 2932952 3786286 Nmul_A2560 Nitrosospira multiformis ATCC 25196 radical SAM family protein YP_413241.1 2931843 R 323848 CDS YP_413242.1 82703676 3786287 complement(2933433..2934716) 1 NC_007614.1 porin 2934716 3786287 Nmul_A2561 Nitrosospira multiformis ATCC 25196 porin YP_413242.1 2933433 R 323848 CDS YP_413243.1 82703677 3786288 complement(2934965..2935804) 1 NC_007614.1 indole-3-glycerol-phosphate synthase 2935804 3786288 Nmul_A2562 Nitrosospira multiformis ATCC 25196 indole-3-glycerol-phosphate synthase YP_413243.1 2934965 R 323848 CDS YP_413244.1 82703678 3784643 complement(2935801..2936853) 1 NC_007614.1 anthranilate phosphoribosyltransferase 2936853 3784643 Nmul_A2563 Nitrosospira multiformis ATCC 25196 anthranilate phosphoribosyltransferase YP_413244.1 2935801 R 323848 CDS YP_413245.1 82703679 3784644 complement(2936926..2937495) 1 NC_007614.1 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase 2937495 3784644 Nmul_A2564 Nitrosospira multiformis ATCC 25196 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase YP_413245.1 2936926 R 323848 CDS YP_413246.1 82703680 3784645 complement(2937750..2938217) 1 NC_007614.1 hypothetical protein 2938217 3784645 Nmul_A2565 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413246.1 2937750 R 323848 CDS YP_413247.1 82703681 3784646 complement(2938369..2939046) 1 NC_007614.1 hypothetical protein 2939046 3784646 Nmul_A2566 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413247.1 2938369 R 323848 CDS YP_413248.1 82703682 3784647 complement(2939060..2940745) 1 NC_007614.1 hypothetical protein 2940745 3784647 Nmul_A2567 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413248.1 2939060 R 323848 CDS YP_413249.1 82703683 3784648 complement(2940761..2941354) 1 NC_007614.1 TonB-dependent receptor 2941354 3784648 Nmul_A2568 Nitrosospira multiformis ATCC 25196 TonB-dependent receptor YP_413249.1 2940761 R 323848 CDS YP_413250.1 82703684 3784649 complement(2941453..2941857) 1 NC_007614.1 biopolymer transport protein ExbD/TolR 2941857 3784649 Nmul_A2569 Nitrosospira multiformis ATCC 25196 biopolymer transport protein ExbD/TolR YP_413250.1 2941453 R 323848 CDS YP_413251.1 82703685 3784650 complement(2941867..2943522) 1 NC_007614.1 MotA/TolQ/ExbB proton channel 2943522 3784650 Nmul_A2570 Nitrosospira multiformis ATCC 25196 MotA/TolQ/ExbB proton channel YP_413251.1 2941867 R 323848 CDS YP_413252.1 82703686 3784651 2943760..2945085 1 NC_007614.1 glycerophosphoryl diester phosphodiesterase 2945085 3784651 Nmul_A2571 Nitrosospira multiformis ATCC 25196 glycerophosphoryl diester phosphodiesterase YP_413252.1 2943760 D 323848 CDS YP_413253.1 82703687 3784652 2945553..2947646 1 NC_007614.1 hypothetical protein 2947646 3784652 Nmul_A2572 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413253.1 2945553 D 323848 CDS YP_413254.1 82703688 3784653 2948787..2949104 1 NC_007614.1 hypothetical protein 2949104 3784653 Nmul_A2573 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413254.1 2948787 D 323848 CDS YP_413255.1 82703689 3784654 2949293..2949940 1 NC_007614.1 hypothetical protein 2949940 3784654 Nmul_A2574 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413255.1 2949293 D 323848 CDS YP_413256.1 82703690 3784655 complement(2950488..2960717) 1 NC_007614.1 filamentous hemeagglutinin-like protein 2960717 3784655 Nmul_A2575 Nitrosospira multiformis ATCC 25196 filamentous hemeagglutinin-like protein YP_413256.1 2950488 R 323848 CDS YP_413257.1 82703691 3784656 complement(2960852..2962465) 1 NC_007614.1 hemolysin activation/secretion protein 2962465 3784656 Nmul_A2576 Nitrosospira multiformis ATCC 25196 hemolysin activation/secretion protein YP_413257.1 2960852 R 323848 CDS YP_413258.1 82703692 3784657 complement(2962526..2964022) 1 NC_007614.1 hypothetical protein 2964022 3784657 Nmul_A2577 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413258.1 2962526 R 323848 CDS YP_413259.1 82703693 3784658 complement(2964114..2964998) 1 NC_007614.1 hypothetical protein 2964998 3784658 Nmul_A2578 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413259.1 2964114 R 323848 CDS YP_413260.1 82703694 3784659 complement(2965417..2966190) 1 NC_007614.1 LuxR family transcriptional regulator 2966190 3784659 Nmul_A2579 Nitrosospira multiformis ATCC 25196 LuxR family transcriptional regulator YP_413260.1 2965417 R 323848 CDS YP_413261.1 82703695 3784660 complement(2966463..2967275) 1 NC_007614.1 hypothetical protein 2967275 3784660 Nmul_A2580 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413261.1 2966463 R 323848 CDS YP_413262.1 82703696 3784661 complement(2967250..2967666) 1 NC_007614.1 N-terminal methylation site 2967666 3784661 Nmul_A2581 Nitrosospira multiformis ATCC 25196 N-terminal methylation site YP_413262.1 2967250 R 323848 CDS YP_413263.1 82703697 3785463 complement(2967672..2968184) 1 NC_007614.1 N-terminal methylation site 2968184 3785463 Nmul_A2582 Nitrosospira multiformis ATCC 25196 N-terminal methylation site YP_413263.1 2967672 R 323848 CDS YP_413264.1 82703698 3785464 complement(2968191..2970440) 1 NC_007614.1 type II and III secretion system protein 2970440 3785464 Nmul_A2583 Nitrosospira multiformis ATCC 25196 type II and III secretion system protein YP_413264.1 2968191 R 323848 CDS YP_413265.1 82703699 3785465 complement(2970437..2970961) 1 NC_007614.1 hypothetical protein 2970961 3785465 Nmul_A2584 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413265.1 2970437 R 323848 CDS YP_413266.1 82703700 3785466 complement(2970958..2971488) 1 NC_007614.1 transmembrane protein 2971488 3785466 Nmul_A2585 Nitrosospira multiformis ATCC 25196 transmembrane protein YP_413266.1 2970958 R 323848 CDS YP_413267.1 82703701 3785467 complement(2971527..2972051) 1 NC_007614.1 transmembrane protein 2972051 3785467 Nmul_A2586 Nitrosospira multiformis ATCC 25196 transmembrane protein YP_413267.1 2971527 R 323848 CDS YP_413268.1 82703702 3785468 complement(2972051..2972875) 1 NC_007614.1 hypothetical protein 2972875 3785468 Nmul_A2587 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413268.1 2972051 R 323848 CDS YP_413269.1 82703703 3785469 complement(2972856..2974655) 1 NC_007614.1 type II secretion system protein E 2974655 3785469 Nmul_A2588 Nitrosospira multiformis ATCC 25196 type II secretion system protein E YP_413269.1 2972856 R 323848 CDS YP_413270.1 82703704 3785470 complement(2974975..2976159) 1 NC_007614.1 type II secretion system protein 2976159 3785470 Nmul_A2589 Nitrosospira multiformis ATCC 25196 type II secretion system protein YP_413270.1 2974975 R 323848 CDS YP_413271.1 82703705 3785471 complement(2976166..2976630) 1 NC_007614.1 general secretion pathway protein G 2976630 3785471 Nmul_A2590 Nitrosospira multiformis ATCC 25196 general secretion pathway protein G YP_413271.1 2976166 R 323848 CDS YP_413272.1 82703706 3785472 complement(2977602..2978105) 1 NC_007614.1 hypothetical protein 2978105 3785472 Nmul_A2591 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413272.1 2977602 R 323848 CDS YP_413273.1 82703707 3785475 complement(2979087..2979674) 1 NC_007614.1 VanZ like protein 2979674 3785475 Nmul_A2594 Nitrosospira multiformis ATCC 25196 VanZ like protein YP_413273.1 2979087 R 323848 CDS YP_413274.1 82703708 3785476 2980374..2981087 1 NC_007614.1 hypothetical protein 2981087 3785476 Nmul_A2595 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413274.1 2980374 D 323848 CDS YP_413275.1 82703709 3785477 2981274..2981906 1 NC_007614.1 putative prophage repressor 2981906 3785477 Nmul_A2596 Nitrosospira multiformis ATCC 25196 putative prophage repressor YP_413275.1 2981274 D 323848 CDS YP_413276.1 82703710 3785478 2981928..2982650 1 NC_007614.1 hypothetical protein 2982650 3785478 Nmul_A2597 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413276.1 2981928 D 323848 CDS YP_413277.1 82703711 3785479 2982661..2984181 1 NC_007614.1 hypothetical protein 2984181 3785479 Nmul_A2598 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413277.1 2982661 D 323848 CDS YP_413278.1 82703712 3785480 2984187..2987309 1 NC_007614.1 DNA polymerase III subunit alpha 2987309 3785480 Nmul_A2599 Nitrosospira multiformis ATCC 25196 DNA polymerase III subunit alpha YP_413278.1 2984187 D 323848 CDS YP_413279.1 82703713 3785481 2987321..2987881 1 NC_007614.1 hypothetical protein 2987881 3785481 Nmul_A2600 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413279.1 2987321 D 323848 CDS YP_413280.1 82703714 3785482 2988433..2988624 1 NC_007614.1 hypothetical protein 2988624 3785482 Nmul_A2601 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413280.1 2988433 D 323848 CDS YP_413281.1 82703715 3786231 2988630..2988908 1 NC_007614.1 hypothetical protein 2988908 3786231 Nmul_A2602 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413281.1 2988630 D 323848 CDS YP_413282.1 82703716 3786232 2988936..2990387 1 NC_007614.1 hypothetical protein 2990387 3786232 Nmul_A2603 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413282.1 2988936 D 323848 CDS YP_413283.1 82703717 3786233 complement(2990469..2990903) 1 NC_007614.1 glutathione-dependent formaldehyde-activating protein 2990903 3786233 Nmul_A2604 Nitrosospira multiformis ATCC 25196 glutathione-dependent formaldehyde-activating protein YP_413283.1 2990469 R 323848 CDS YP_413284.1 82703718 3786234 complement(2991303..2993054) 1 NC_007614.1 hypothetical protein 2993054 3786234 Nmul_A2605 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413284.1 2991303 R 323848 CDS YP_413285.1 82703719 3786235 complement(2993054..2993401) 1 NC_007614.1 transposase IS4 2993401 3786235 Nmul_A2606 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_413285.1 2993054 R 323848 CDS YP_413286.1 82703720 3786236 complement(2993443..2993811) 1 NC_007614.1 transposase 2993811 3786236 Nmul_A2607 Nitrosospira multiformis ATCC 25196 transposase YP_413286.1 2993443 R 323848 CDS YP_413287.1 82703721 3786237 complement(2994041..2994721) 1 NC_007614.1 MT-A70 2994721 3786237 Nmul_A2608 Nitrosospira multiformis ATCC 25196 MT-A70 YP_413287.1 2994041 R 323848 CDS YP_413288.1 82703722 3786238 complement(2994702..2995505) 1 NC_007614.1 hypothetical protein 2995505 3786238 Nmul_A2609 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413288.1 2994702 R 323848 CDS YP_413289.1 82703723 3786239 complement(2995535..2996998) 1 NC_007614.1 carboxylyase-like protein 2996998 3786239 Nmul_A2610 Nitrosospira multiformis ATCC 25196 carboxylyase-like protein YP_413289.1 2995535 R 323848 CDS YP_413290.1 82703724 3786240 complement(2997023..2997895) 1 NC_007614.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 2997895 ubiA 3786240 ubiA Nitrosospira multiformis ATCC 25196 4-hydroxybenzoate octaprenyltransferase YP_413290.1 2997023 R 323848 CDS YP_413291.1 82703725 3786241 complement(2997892..2998434) 1 NC_007614.1 chorismate lyase 2998434 3786241 Nmul_A2612 Nitrosospira multiformis ATCC 25196 chorismate lyase YP_413291.1 2997892 R 323848 CDS YP_413292.1 82703726 3786242 complement(2998649..2999752) 1 NC_007614.1 putative C4-dicarboxylate transporter 2999752 3786242 Nmul_A2613 Nitrosospira multiformis ATCC 25196 putative C4-dicarboxylate transporter YP_413292.1 2998649 R 323848 CDS YP_413293.1 82703727 3786243 complement(2999782..3000771) 1 NC_007614.1 transport system permease 3000771 3786243 Nmul_A2614 Nitrosospira multiformis ATCC 25196 transport system permease YP_413293.1 2999782 R 323848 CDS YP_413294.1 82703728 3786244 complement(3000935..3001597) 1 NC_007614.1 HAD family hydrolase 3001597 3786244 Nmul_A2615 Nitrosospira multiformis ATCC 25196 HAD family hydrolase YP_413294.1 3000935 R 323848 CDS YP_413295.1 82703729 3786245 complement(3001594..3002268) 1 NC_007614.1 DnaA regulatory inactivator Hda 3002268 3786245 Nmul_A2616 Nitrosospira multiformis ATCC 25196 DnaA regulatory inactivator Hda YP_413295.1 3001594 R 323848 CDS YP_413296.1 82703730 3786246 3002383..3003522 1 NC_007614.1 phosphoribosylformylglycinamidine cyclo-ligase 3003522 3786246 Nmul_A2617 Nitrosospira multiformis ATCC 25196 phosphoribosylformylglycinamidine cyclo-ligase YP_413296.1 3002383 D 323848 CDS YP_413297.1 82703731 3786247 3003570..3004208 1 NC_007614.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 3004208 purN 3786247 purN Nitrosospira multiformis ATCC 25196 phosphoribosylglycinamide formyltransferase YP_413297.1 3003570 D 323848 CDS YP_413298.1 82703732 3786248 3004205..3004969 1 NC_007614.1 hypothetical protein 3004969 3786248 Nmul_A2619 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413298.1 3004205 D 323848 CDS YP_413299.1 82703733 3786249 3005120..3006391 1 NC_007614.1 Fmu (Sun) NOL1/Nop2p 3006391 3786249 Nmul_A2620 Nitrosospira multiformis ATCC 25196 Fmu (Sun) NOL1/Nop2p YP_413299.1 3005120 D 323848 CDS YP_413300.1 82703734 3786324 3006388..3006981 1 NC_007614.1 putative endonuclease protein 3006981 3786324 Nmul_A2621 Nitrosospira multiformis ATCC 25196 putative endonuclease protein YP_413300.1 3006388 D 323848 CDS YP_413301.1 82703735 3786325 3007125..3008363 1 NC_007614.1 mechanosensitive ion channel MscS 3008363 3786325 Nmul_A2622 Nitrosospira multiformis ATCC 25196 mechanosensitive ion channel MscS YP_413301.1 3007125 D 323848 CDS YP_413302.1 82703736 3786326 3008459..3008794 1 NC_007614.1 hypothetical protein 3008794 3786326 Nmul_A2623 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413302.1 3008459 D 323848 CDS YP_413303.1 82703737 3786327 complement(3008847..3009428) 1 NC_007614.1 hypothetical protein 3009428 3786327 Nmul_A2624 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413303.1 3008847 R 323848 CDS YP_413304.1 82703738 3786328 complement(3009683..3010072) 1 NC_007614.1 glyoxalase I 3010072 3786328 Nmul_A2625 Nitrosospira multiformis ATCC 25196 glyoxalase I YP_413304.1 3009683 R 323848 CDS YP_413305.1 82703739 3786329 complement(3010073..3010270) 1 NC_007614.1 rubredoxin-type Fe(Cys)4 protein 3010270 3786329 Nmul_A2626 Nitrosospira multiformis ATCC 25196 rubredoxin-type Fe(Cys)4 protein YP_413305.1 3010073 R 323848 CDS YP_413306.1 82703740 3786330 3010319..3011158 1 NC_007614.1 phosphomethylpyrimidine kinase 3011158 3786330 Nmul_A2627 Nitrosospira multiformis ATCC 25196 phosphomethylpyrimidine kinase YP_413306.1 3010319 D 323848 CDS YP_413307.1 82703741 3786331 3011121..3011825 1 NC_007614.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 3011825 thiE 3786331 thiE Nitrosospira multiformis ATCC 25196 thiamine-phosphate pyrophosphorylase YP_413307.1 3011121 D 323848 CDS YP_413308.1 82703742 3786332 3011825..3013102 1 NC_007614.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 3013102 3786332 Nmul_A2629 Nitrosospira multiformis ATCC 25196 glutamate-1-semialdehyde aminotransferase YP_413308.1 3011825 D 323848 CDS YP_413309.1 82703743 3786333 complement(3013367..3014029) 1 NC_007614.1 cytochrome c, class I 3014029 3786333 Nmul_A2630 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_413309.1 3013367 R 323848 CDS YP_413310.1 82703744 3786334 3014130..3014777 1 NC_007614.1 hypothetical protein 3014777 3786334 Nmul_A2631 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413310.1 3014130 D 323848 CDS YP_413311.1 82703745 3786335 3014994..3015794 1 NC_007614.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 3015794 3786335 Nmul_A2632 Nitrosospira multiformis ATCC 25196 methionine aminopeptidase YP_413311.1 3014994 D 323848 CDS YP_413312.1 82703746 3786336 3015800..3018463 1 NC_007614.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3018463 3786336 Nmul_A2633 Nitrosospira multiformis ATCC 25196 PII uridylyl-transferase YP_413312.1 3015800 D 323848 CDS YP_413313.1 82703747 3786337 complement(3018450..3020840) 1 NC_007614.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 3020840 3786337 Nmul_A2634 Nitrosospira multiformis ATCC 25196 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_413313.1 3018450 R 323848 CDS YP_413314.1 82703748 3786338 3020982..3021917 1 NC_007614.1 LysR family transcriptional regulator 3021917 3786338 Nmul_A2635 Nitrosospira multiformis ATCC 25196 LysR family transcriptional regulator YP_413314.1 3020982 D 323848 CDS YP_413315.1 82703749 3786339 complement(3022090..3022833) 1 NC_007614.1 coenzyme PQQ synthesis C 3022833 3786339 Nmul_A2636 Nitrosospira multiformis ATCC 25196 coenzyme PQQ synthesis C YP_413315.1 3022090 R 323848 CDS YP_413316.1 82703750 3786340 complement(3023245..3024207) 1 NC_007614.1 hypothetical protein 3024207 3786340 Nmul_A2637 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413316.1 3023245 R 323848 CDS YP_413317.1 82703751 3786341 3024497..3024919 1 NC_007614.1 hypothetical protein 3024919 3786341 Nmul_A2638 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413317.1 3024497 D 323848 CDS YP_413318.1 82703752 3786342 complement(3025050..3025370) 1 NC_007614.1 glutaredoxin-like protein 3025370 3786342 Nmul_A2639 Nitrosospira multiformis ATCC 25196 glutaredoxin-like protein YP_413318.1 3025050 R 323848 CDS YP_413319.1 82703753 3786343 complement(3025450..3026310) 1 NC_007614.1 HemK family modification methylase 3026310 3786343 Nmul_A2640 Nitrosospira multiformis ATCC 25196 HemK family modification methylase YP_413319.1 3025450 R 323848 CDS YP_413320.1 82703754 3785252 complement(3026322..3027398) 1 NC_007614.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3027398 prfA 3785252 prfA Nitrosospira multiformis ATCC 25196 peptide chain release factor 1 YP_413320.1 3026322 R 323848 CDS YP_413321.1 82703755 3785253 complement(3027395..3028657) 1 NC_007614.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 3028657 hemA 3785253 hemA Nitrosospira multiformis ATCC 25196 glutamyl-tRNA reductase YP_413321.1 3027395 R 323848 CDS YP_413322.1 82703756 3785254 3028691..3028942 1 NC_007614.1 hypothetical protein 3028942 3785254 Nmul_A2643 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413322.1 3028691 D 323848 CDS YP_413323.1 82703757 3785255 3029060..3030241 1 NC_007614.1 hypothetical protein 3030241 3785255 Nmul_A2644 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413323.1 3029060 D 323848 CDS YP_413324.1 82703758 3785256 3030521..3030706 1 NC_007614.1 CsbD-like protein 3030706 3785256 Nmul_A2645 Nitrosospira multiformis ATCC 25196 CsbD-like protein YP_413324.1 3030521 D 323848 CDS YP_413325.1 82703759 3785257 complement(3031271..3031738) 1 NC_007614.1 NUDIX hydrolase 3031738 3785257 Nmul_A2646 Nitrosospira multiformis ATCC 25196 NUDIX hydrolase YP_413325.1 3031271 R 323848 CDS YP_413326.1 82703760 3785258 complement(3031925..3033328) 1 NC_007614.1 coenzyme F390 synthetase-like protein 3033328 3785258 Nmul_A2647 Nitrosospira multiformis ATCC 25196 coenzyme F390 synthetase-like protein YP_413326.1 3031925 R 323848 CDS YP_413327.1 82703761 3785259 complement(3033581..3038629) 1 NC_007614.1 hypothetical protein 3038629 3785259 Nmul_A2648 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413327.1 3033581 R 323848 CDS YP_413328.1 82703762 3785260 3039388..3039789 1 NC_007614.1 IS298, transposase OrfA 3039789 3785260 Nmul_A2649 Nitrosospira multiformis ATCC 25196 IS298, transposase OrfA YP_413328.1 3039388 D 323848 CDS YP_413329.1 82703763 3785261 3039639..3040172 1 NC_007614.1 transposase IS4 3040172 3785261 Nmul_A2650 Nitrosospira multiformis ATCC 25196 transposase IS4 YP_413329.1 3039639 D 323848 CDS YP_413330.1 82703764 3785262 3040242..3041543 1 NC_007614.1 hypothetical protein 3041543 3785262 Nmul_A2651 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413330.1 3040242 D 323848 CDS YP_413331.1 82703765 3785263 3041957..3042937 1 NC_007614.1 hypothetical protein 3042937 3785263 Nmul_A2652 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413331.1 3041957 D 323848 CDS YP_413332.1 82703766 3785265 3043677..3044684 1 NC_007614.1 riboflavin biosynthesis protein RibF 3044684 3785265 Nmul_A2653 Nitrosospira multiformis ATCC 25196 riboflavin biosynthesis protein RibF YP_413332.1 3043677 D 323848 CDS YP_413333.1 82703767 3785266 3044724..3047555 1 NC_007614.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 3047555 ileS 3785266 ileS Nitrosospira multiformis ATCC 25196 isoleucyl-tRNA synthetase YP_413333.1 3044724 D 323848 CDS YP_413334.1 82703768 3785267 3047583..3048065 1 NC_007614.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 3048065 lspA 3785267 lspA Nitrosospira multiformis ATCC 25196 lipoprotein signal peptidase YP_413334.1 3047583 D 323848 CDS YP_413335.1 82703769 3785268 complement(3048086..3048640) 1 NC_007614.1 ATP protein 3048640 3785268 Nmul_A2656 Nitrosospira multiformis ATCC 25196 ATP protein YP_413335.1 3048086 R 323848 CDS YP_413336.1 82703770 3785269 complement(3048695..3050227) 1 NC_007614.1 DEAD/DEAH box helicase-like protein 3050227 3785269 Nmul_A2657 Nitrosospira multiformis ATCC 25196 DEAD/DEAH box helicase-like protein YP_413336.1 3048695 R 323848 CDS YP_413337.1 82703771 3785665 complement(3050467..3051249) 1 NC_007614.1 hypothetical protein 3051249 3785665 Nmul_A2658 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413337.1 3050467 R 323848 CDS YP_413338.1 82703772 3785666 complement(3051532..3052134) 1 NC_007614.1 NapC/NirT cytochrome c-like protein 3052134 3785666 Nmul_A2659 Nitrosospira multiformis ATCC 25196 NapC/NirT cytochrome c-like protein YP_413338.1 3051532 R 323848 CDS YP_413339.1 82703773 3785667 complement(3052136..3052843) 1 NC_007614.1 cytochrome c-554 3052843 3785667 Nmul_A2660 Nitrosospira multiformis ATCC 25196 cytochrome c-554 YP_413339.1 3052136 R 323848 CDS YP_413340.1 82703774 3785668 complement(3053720..3054835) 1 NC_007614.1 hypothetical protein 3054835 3785668 Nmul_A2661 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413340.1 3053720 R 323848 CDS YP_413341.1 82703775 3785669 complement(3054868..3056580) 1 NC_007614.1 hydroxylamine oxidase 3056580 3785669 Nmul_A2662 Nitrosospira multiformis ATCC 25196 hydroxylamine oxidase YP_413341.1 3054868 R 323848 CDS YP_413342.1 82703776 3785670 complement(3056810..3057661) 1 NC_007614.1 formate/nitrite transporter 3057661 3785670 Nmul_A2663 Nitrosospira multiformis ATCC 25196 formate/nitrite transporter YP_413342.1 3056810 R 323848 CDS YP_413343.1 82703777 3785671 complement(3057699..3058322) 1 NC_007614.1 hypothetical protein 3058322 3785671 Nmul_A2664 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413343.1 3057699 R 323848 CDS YP_413344.1 82703778 3785672 complement(3058319..3058933) 1 NC_007614.1 electron transport protein SCO1/SenC 3058933 3785672 Nmul_A2665 Nitrosospira multiformis ATCC 25196 electron transport protein SCO1/SenC YP_413344.1 3058319 R 323848 CDS YP_413345.1 82703779 3785673 complement(3058964..3060451) 1 NC_007614.1 cytochrome c oxidase subunit I 3060451 3785673 Nmul_A2666 Nitrosospira multiformis ATCC 25196 cytochrome c oxidase subunit I YP_413345.1 3058964 R 323848 CDS YP_413346.1 82703780 3785674 complement(3060464..3060991) 1 NC_007614.1 cytochrome c oxidase subunit II 3060991 3785674 Nmul_A2667 Nitrosospira multiformis ATCC 25196 cytochrome c oxidase subunit II YP_413346.1 3060464 R 323848 CDS YP_413347.1 82703781 3785675 complement(3062155..3064044) 1 NC_007614.1 asparagine synthase 3064044 3785675 Nmul_A2668 Nitrosospira multiformis ATCC 25196 asparagine synthase YP_413347.1 3062155 R 323848 CDS YP_413348.1 82703782 3785676 complement(3064174..3065406) 1 NC_007614.1 Orn/DAP/Arg decarboxylase 2 3065406 3785676 Nmul_A2669 Nitrosospira multiformis ATCC 25196 Orn/DAP/Arg decarboxylase 2 YP_413348.1 3064174 R 323848 CDS YP_413349.1 82703783 3785677 complement(3065403..3066998) 1 NC_007614.1 AMP-dependent synthetase and ligase 3066998 3785677 Nmul_A2670 Nitrosospira multiformis ATCC 25196 AMP-dependent synthetase and ligase YP_413349.1 3065403 R 323848 CDS YP_413350.1 82703784 3785678 complement(3067053..3068402) 1 NC_007614.1 two component sigma-54 specific Fis family transcriptional regulator 3068402 3785678 Nmul_A2671 Nitrosospira multiformis ATCC 25196 two component sigma-54 specific Fis family transcriptional regulator YP_413350.1 3067053 R 323848 CDS YP_413351.1 82703785 3785679 complement(3068448..3070427) 1 NC_007614.1 periplasmic sensor signal transduction histidine kinase 3070427 3785679 Nmul_A2672 Nitrosospira multiformis ATCC 25196 periplasmic sensor signal transduction histidine kinase YP_413351.1 3068448 R 323848 CDS YP_413352.1 82703786 3785680 complement(3070552..3071943) 1 NC_007614.1 undecaprenyl-phosphate galactosephosphotransferase 3071943 3785680 Nmul_A2673 Nitrosospira multiformis ATCC 25196 undecaprenyl-phosphate galactosephosphotransferase YP_413352.1 3070552 R 323848 CDS YP_413353.1 82703787 3785681 complement(3072510..3073121) 1 NC_007614.1 two component LuxR family transcriptional regulator 3073121 3785681 Nmul_A2674 Nitrosospira multiformis ATCC 25196 two component LuxR family transcriptional regulator YP_413353.1 3072510 R 323848 CDS YP_413354.1 82703788 3785682 complement(3073203..3073688) 1 NC_007614.1 response regulator receiver domain-containing protein 3073688 3785682 Nmul_A2675 Nitrosospira multiformis ATCC 25196 response regulator receiver domain-containing protein YP_413354.1 3073203 R 323848 CDS YP_413355.1 82703789 3785683 complement(3073766..3074566) 1 NC_007614.1 peptidase S1 and S6, chymotrypsin/Hap 3074566 3785683 Nmul_A2676 Nitrosospira multiformis ATCC 25196 peptidase S1 and S6, chymotrypsin/Hap YP_413355.1 3073766 R 323848 CDS YP_413356.1 82703790 3785684 complement(3074652..3074909) 1 NC_007614.1 hypothetical protein 3074909 3785684 Nmul_A2677 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413356.1 3074652 R 323848 CDS YP_413357.1 82703791 3785040 3075248..3076927 1 NC_007614.1 phosphate-selective porin O and P 3076927 3785040 Nmul_A2678 Nitrosospira multiformis ATCC 25196 phosphate-selective porin O and P YP_413357.1 3075248 D 323848 CDS YP_413358.1 82703792 3785041 complement(3077023..3080220) 1 NC_007614.1 hypothetical protein 3080220 3785041 Nmul_A2679 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413358.1 3077023 R 323848 CDS YP_413359.1 82703793 3785042 complement(3080361..3080732) 1 NC_007614.1 hypothetical protein 3080732 3785042 Nmul_A2680 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413359.1 3080361 R 323848 CDS YP_413360.1 82703794 3785043 3080864..3081841 1 NC_007614.1 hypothetical protein 3081841 3785043 Nmul_A2681 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413360.1 3080864 D 323848 CDS YP_413361.1 82703795 3785044 complement(3081910..3082461) 1 NC_007614.1 thioredoxin 3082461 3785044 Nmul_A2682 Nitrosospira multiformis ATCC 25196 thioredoxin YP_413361.1 3081910 R 323848 CDS YP_413362.1 82703796 3785045 complement(3082572..3084536) 1 NC_007614.1 protein-disulfide reductase 3084536 3785045 Nmul_A2683 Nitrosospira multiformis ATCC 25196 protein-disulfide reductase YP_413362.1 3082572 R 323848 CDS YP_413363.1 82703797 3785046 complement(3084553..3084918) 1 NC_007614.1 CutA1 divalent ion tolerance protein 3084918 3785046 Nmul_A2684 Nitrosospira multiformis ATCC 25196 CutA1 divalent ion tolerance protein YP_413363.1 3084553 R 323848 CDS YP_413364.1 82703798 3785047 complement(3084965..3085873) 1 NC_007614.1 NAD-dependent epimerase/dehydratase 3085873 3785047 Nmul_A2685 Nitrosospira multiformis ATCC 25196 NAD-dependent epimerase/dehydratase YP_413364.1 3084965 R 323848 CDS YP_413365.1 82703799 3785048 3085915..3086964 1 NC_007614.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 3086964 3785048 Nmul_A2686 Nitrosospira multiformis ATCC 25196 CDP-6-deoxy-delta-3,4-glucoseen reductase YP_413365.1 3085915 D 323848 CDS YP_413366.1 82703800 3785049 complement(3087056..3088270) 1 NC_007614.1 HemY-like 3088270 3785049 Nmul_A2687 Nitrosospira multiformis ATCC 25196 HemY-like YP_413366.1 3087056 R 323848 CDS YP_413367.1 82703801 3785050 complement(3088267..3089316) 1 NC_007614.1 hypothetical protein 3089316 3785050 Nmul_A2688 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413367.1 3088267 R 323848 CDS YP_413368.1 82703802 3785051 complement(3089378..3090160) 1 NC_007614.1 uroporphyrinogen-III synthase 3090160 3785051 Nmul_A2689 Nitrosospira multiformis ATCC 25196 uroporphyrinogen-III synthase YP_413368.1 3089378 R 323848 CDS YP_413369.1 82703803 3785052 complement(3090157..3091122) 1 NC_007614.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 3091122 hemC 3785052 hemC Nitrosospira multiformis ATCC 25196 porphobilinogen deaminase YP_413369.1 3090157 R 323848 CDS YP_413370.1 82703804 3785053 3091269..3094082 1 NC_007614.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 3094082 3785053 Nmul_A2691 Nitrosospira multiformis ATCC 25196 phosphoenolpyruvate carboxylase YP_413370.1 3091269 D 323848 CDS YP_413371.1 82703805 3785054 3094171..3095595 1 NC_007614.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 3095595 3785054 Nmul_A2692 Nitrosospira multiformis ATCC 25196 (dimethylallyl)adenosine tRNA methylthiotransferase YP_413371.1 3094171 D 323848 CDS YP_413372.1 82703806 3785055 complement(3095547..3096455) 1 NC_007614.1 diguanylate cyclase 3096455 3785055 Nmul_A2693 Nitrosospira multiformis ATCC 25196 diguanylate cyclase YP_413372.1 3095547 R 323848 CDS YP_413373.1 82703807 3785056 complement(3096452..3099808) 1 NC_007614.1 multi-sensor hybrid histidine kinase 3099808 3785056 Nmul_A2694 Nitrosospira multiformis ATCC 25196 multi-sensor hybrid histidine kinase YP_413373.1 3096452 R 323848 CDS YP_413374.1 82703808 3785057 complement(3100230..3100499) 1 NC_007614.1 hypothetical protein 3100499 3785057 Nmul_A2695 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413374.1 3100230 R 323848 CDS YP_413375.1 82703809 3785058 3100617..3101657 1 NC_007614.1 PhoH-like protein 3101657 3785058 Nmul_A2696 Nitrosospira multiformis ATCC 25196 PhoH-like protein YP_413375.1 3100617 D 323848 CDS YP_413376.1 82703810 3786114 3101641..3102210 1 NC_007614.1 hypothetical protein 3102210 3786114 Nmul_A2697 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413376.1 3101641 D 323848 CDS YP_413377.1 82703811 3786115 3102283..3103119 1 NC_007614.1 transporter-associated protein 3103119 3786115 Nmul_A2698 Nitrosospira multiformis ATCC 25196 transporter-associated protein YP_413377.1 3102283 D 323848 CDS YP_413378.1 82703812 3786116 3103142..3103711 1 NC_007614.1 inorganic pyrophosphatase 3103711 3786116 Nmul_A2699 Nitrosospira multiformis ATCC 25196 inorganic pyrophosphatase YP_413378.1 3103142 D 323848 CDS YP_413379.1 82703813 3786117 3103802..3105724 1 NC_007614.1 ABC transporter-like protein 3105724 3786117 Nmul_A2700 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_413379.1 3103802 D 323848 CDS YP_413380.1 82703814 3786118 3105814..3106143 1 NC_007614.1 cytochrome c, class I 3106143 3786118 Nmul_A2701 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_413380.1 3105814 D 323848 CDS YP_413381.1 82703815 3786119 3106172..3106498 1 NC_007614.1 cytochrome c, class I 3106498 3786119 Nmul_A2702 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_413381.1 3106172 D 323848 CDS YP_413382.1 82703816 3786120 complement(3106680..3107108) 1 NC_007614.1 hypothetical protein 3107108 3786120 Nmul_A2703 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413382.1 3106680 R 323848 CDS YP_413383.1 82703817 3786121 complement(3107117..3107764) 1 NC_007614.1 endonuclease III 3107764 3786121 Nmul_A2704 Nitrosospira multiformis ATCC 25196 endonuclease III YP_413383.1 3107117 R 323848 CDS YP_413384.1 82703818 3786122 complement(3107768..3108547) 1 NC_007614.1 RnfABCDGE type electron transport complex subunit B 3108547 3786122 Nmul_A2705 Nitrosospira multiformis ATCC 25196 RnfABCDGE type electron transport complex subunit B YP_413384.1 3107768 R 323848 CDS YP_413385.1 82703819 3786123 complement(3108544..3109593) 1 NC_007614.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 3109593 3786123 Nmul_A2706 Nitrosospira multiformis ATCC 25196 dihydroorotate dehydrogenase 2 YP_413385.1 3108544 R 323848 CDS YP_413386.1 82703820 3786124 3109752..3110687 1 NC_007614.1 kinesin light chain 3110687 3786124 Nmul_A2707 Nitrosospira multiformis ATCC 25196 kinesin light chain YP_413386.1 3109752 D 323848 CDS YP_413387.1 82703821 3786125 complement(3110701..3111456) 1 NC_007614.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 3111456 3786125 Nmul_A2708 Nitrosospira multiformis ATCC 25196 arginyl-tRNA-protein transferase YP_413387.1 3110701 R 323848 CDS YP_413388.1 82703822 3786126 complement(3111440..3112138) 1 NC_007614.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 3112138 aat 3786126 aat Nitrosospira multiformis ATCC 25196 leucyl/phenylalanyl-tRNA--protein transferase YP_413388.1 3111440 R 323848 CDS YP_413389.1 82703823 3786127 complement(3112176..3112874) 1 NC_007614.1 ExsB 3112874 3786127 Nmul_A2710 Nitrosospira multiformis ATCC 25196 ExsB YP_413389.1 3112176 R 323848 CDS YP_413390.1 82703824 3786128 complement(3112928..3113632) 1 NC_007614.1 radical SAM family protein 3113632 3786128 Nmul_A2711 Nitrosospira multiformis ATCC 25196 radical SAM family protein YP_413390.1 3112928 R 323848 CDS YP_413391.1 82703825 3786129 complement(3113682..3114596) 1 NC_007614.1 hypothetical protein 3114596 3786129 Nmul_A2712 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413391.1 3113682 R 323848 CDS YP_413392.1 82703826 3786130 complement(3114599..3115126) 1 NC_007614.1 OmpA/MotB 3115126 3786130 Nmul_A2713 Nitrosospira multiformis ATCC 25196 OmpA/MotB YP_413392.1 3114599 R 323848 CDS YP_413393.1 82703827 3786131 complement(3115165..3116490) 1 NC_007614.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3116490 tolB 3786131 tolB Nitrosospira multiformis ATCC 25196 translocation protein TolB YP_413393.1 3115165 R 323848 CDS YP_413394.1 82703828 3786132 complement(3116522..3117583) 1 NC_007614.1 TonB-like protein 3117583 3786132 Nmul_A2715 Nitrosospira multiformis ATCC 25196 TonB-like protein YP_413394.1 3116522 R 323848 CDS YP_413395.1 82703829 3786133 complement(3117771..3118187) 1 NC_007614.1 biopolymer transport protein ExbD/TolR 3118187 3786133 Nmul_A2716 Nitrosospira multiformis ATCC 25196 biopolymer transport protein ExbD/TolR YP_413395.1 3117771 R 323848 CDS YP_413396.1 82703830 3785882 complement(3118223..3118909) 1 NC_007614.1 MotA/TolQ/ExbB proton channel 3118909 3785882 Nmul_A2717 Nitrosospira multiformis ATCC 25196 MotA/TolQ/ExbB proton channel YP_413396.1 3118223 R 323848 CDS YP_413397.1 82703831 3785883 complement(3118906..3119334) 1 NC_007614.1 4-hydroxybenzoyl-CoA thioesterase 3119334 3785883 Nmul_A2718 Nitrosospira multiformis ATCC 25196 4-hydroxybenzoyl-CoA thioesterase YP_413397.1 3118906 R 323848 CDS YP_413398.1 82703832 3785884 complement(3119408..3120451) 1 NC_007614.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3120451 ruvB 3785884 ruvB Nitrosospira multiformis ATCC 25196 Holliday junction DNA helicase RuvB YP_413398.1 3119408 R 323848 CDS YP_413399.1 82703833 3785885 complement(3120560..3121153) 1 NC_007614.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3121153 ruvA 3785885 ruvA Nitrosospira multiformis ATCC 25196 Holliday junction DNA helicase RuvA YP_413399.1 3120560 R 323848 CDS YP_413400.1 82703834 3785886 complement(3121150..3121551) 1 NC_007614.1 crossover junction endodeoxyribonuclease RuvC 3121551 3785886 Nmul_A2721 Nitrosospira multiformis ATCC 25196 crossover junction endodeoxyribonuclease RuvC YP_413400.1 3121150 R 323848 CDS YP_413401.1 82703835 3785887 complement(3121706..3122428) 1 NC_007614.1 hypothetical protein 3122428 3785887 Nmul_A2722 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413401.1 3121706 R 323848 CDS YP_413402.1 82703836 3785888 complement(3122591..3123727) 1 NC_007614.1 FAD dependent oxidoreductase 3123727 3785888 Nmul_A2723 Nitrosospira multiformis ATCC 25196 FAD dependent oxidoreductase YP_413402.1 3122591 R 323848 CDS YP_413403.1 82703837 3785890 complement(3124181..3124999) 1 NC_007614.1 hypothetical protein 3124999 3785890 Nmul_A2724 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413403.1 3124181 R 323848 CDS YP_413404.1 82703838 3785891 3125852..3127291 1 NC_007614.1 diguanylate cyclase 3127291 3785891 Nmul_A2725 Nitrosospira multiformis ATCC 25196 diguanylate cyclase YP_413404.1 3125852 D 323848 CDS YP_413405.1 82703839 3785892 3128080..3129750 1 NC_007614.1 Glycerone kinase 3129750 3785892 Nmul_A2726 Nitrosospira multiformis ATCC 25196 Glycerone kinase YP_413405.1 3128080 D 323848 CDS YP_413406.1 82703840 3785893 3130422..3130913 1 NC_007614.1 hypothetical protein 3130913 3785893 Nmul_A2727 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413406.1 3130422 D 323848 CDS YP_413407.1 82703841 3785894 3131152..3132540 1 NC_007614.1 phosphatase-like 3132540 3785894 Nmul_A2728 Nitrosospira multiformis ATCC 25196 phosphatase-like YP_413407.1 3131152 D 323848 CDS YP_413408.1 82703842 3785895 complement(3132778..3133107) 1 NC_007614.1 hypothetical protein 3133107 3785895 Nmul_A2729 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413408.1 3132778 R 323848 CDS YP_413409.1 82703843 3785896 3133493..3134521 1 NC_007614.1 alpha/beta hydrolase fold protein 3134521 3785896 Nmul_A2730 Nitrosospira multiformis ATCC 25196 alpha/beta hydrolase fold protein YP_413409.1 3133493 D 323848 CDS YP_413410.1 82703844 3785897 3134742..3138266 1 NC_007614.1 DNA polymerase III subunit alpha 3138266 3785897 Nmul_A2731 Nitrosospira multiformis ATCC 25196 DNA polymerase III subunit alpha YP_413410.1 3134742 D 323848 CDS YP_413411.1 82703845 3785898 3138419..3139153 1 NC_007614.1 hypothetical protein 3139153 3785898 Nmul_A2732 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413411.1 3138419 D 323848 CDS YP_413412.1 82703846 3785899 complement(3139364..3139624) 1 NC_007614.1 4Fe-4S ferredoxin 3139624 3785899 Nmul_A2733 Nitrosospira multiformis ATCC 25196 4Fe-4S ferredoxin YP_413412.1 3139364 R 323848 CDS YP_413413.1 82703847 3785705 complement(3139627..3140124) 1 NC_007614.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 3140124 coaD 3785705 coaD Nitrosospira multiformis ATCC 25196 phosphopantetheine adenylyltransferase YP_413413.1 3139627 R 323848 CDS YP_413414.1 82703848 3785706 complement(3140125..3140664) 1 NC_007614.1 hypothetical protein 3140664 3785706 Nmul_A2735 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413414.1 3140125 R 323848 CDS YP_413415.1 82703849 3785707 complement(3140727..3142037) 1 NC_007614.1 peptidase M16-like protein 3142037 3785707 Nmul_A2736 Nitrosospira multiformis ATCC 25196 peptidase M16-like protein YP_413415.1 3140727 R 323848 CDS YP_413416.1 82703850 3785708 complement(3142054..3143451) 1 NC_007614.1 peptidase M16-like protein 3143451 3785708 Nmul_A2737 Nitrosospira multiformis ATCC 25196 peptidase M16-like protein YP_413416.1 3142054 R 323848 CDS YP_413417.1 82703851 3785709 3143555..3144541 1 NC_007614.1 signal recognition particle-docking protein FtsY 3144541 3785709 Nmul_A2738 Nitrosospira multiformis ATCC 25196 signal recognition particle-docking protein FtsY YP_413417.1 3143555 D 323848 CDS YP_413418.1 82703852 3785710 3144615..3145268 1 NC_007614.1 ABC transporter-like protein 3145268 3785710 Nmul_A2739 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_413418.1 3144615 D 323848 CDS YP_413419.1 82703853 3785711 3145265..3146173 1 NC_007614.1 hypothetical protein 3146173 3785711 Nmul_A2740 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413419.1 3145265 D 323848 CDS YP_413420.1 82703854 3785712 3146280..3147125 1 NC_007614.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 3147125 3785712 Nmul_A2741 Nitrosospira multiformis ATCC 25196 RNA polymerase factor sigma-32 YP_413420.1 3146280 D 323848 CDS YP_413421.1 82703855 3785713 complement(3147187..3147438) 1 NC_007614.1 BolA-like protein 3147438 3785713 Nmul_A2742 Nitrosospira multiformis ATCC 25196 BolA-like protein YP_413421.1 3147187 R 323848 CDS YP_413422.1 82703856 3785714 complement(3147540..3148295) 1 NC_007614.1 hypothetical protein 3148295 3785714 Nmul_A2743 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413422.1 3147540 R 323848 CDS YP_413423.1 82703857 3785715 complement(3148292..3149221) 1 NC_007614.1 ABC transporter-like protein 3149221 3785715 Nmul_A2744 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_413423.1 3148292 R 323848 CDS YP_413424.1 82703858 3785716 complement(3149361..3149651) 1 NC_007614.1 anti-sigma-factor antagonist domain-containing protein 3149651 3785716 Nmul_A2745 Nitrosospira multiformis ATCC 25196 anti-sigma-factor antagonist domain-containing protein YP_413424.1 3149361 R 323848 CDS YP_413425.1 82703859 3785717 complement(3149655..3150311) 1 NC_007614.1 toluene tolerance 3150311 3785717 Nmul_A2746 Nitrosospira multiformis ATCC 25196 toluene tolerance YP_413425.1 3149655 R 323848 CDS YP_413426.1 82703860 3785718 complement(3150470..3150955) 1 NC_007614.1 hypothetical protein 3150955 3785718 Nmul_A2747 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413426.1 3150470 R 323848 CDS YP_413427.1 82703861 3785719 complement(3150955..3151752) 1 NC_007614.1 hypothetical protein 3151752 3785719 Nmul_A2748 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413427.1 3150955 R 323848 CDS YP_413428.1 82703862 3785720 complement(3151745..3152557) 1 NC_007614.1 ABC transporter-like protein 3152557 3785720 Nmul_A2749 Nitrosospira multiformis ATCC 25196 ABC transporter-like protein YP_413428.1 3151745 R 323848 CDS YP_413429.1 82703863 3785721 complement(3152664..3153545) 1 NC_007614.1 hypothetical protein 3153545 3785721 Nmul_A2750 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413429.1 3152664 R 323848 CDS YP_413430.2 162139860 3785722 complement(3153574..3154488) 1 NC_007614.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 3154488 prmA 3785722 prmA Nitrosospira multiformis ATCC 25196 ribosomal protein L11 methyltransferase YP_413430.2 3153574 R 323848 CDS YP_413431.1 82703865 3785723 complement(3154617..3155975) 1 NC_007614.1 acetyl-CoA carboxylase, biotin carboxylase 3155975 3785723 Nmul_A2752 Nitrosospira multiformis ATCC 25196 acetyl-CoA carboxylase, biotin carboxylase YP_413431.1 3154617 R 323848 CDS YP_413432.1 82703866 3785724 complement(3156075..3156539) 1 NC_007614.1 acetyl-CoA carboxylase, biotin carboxyl carrier protein 3156539 3785724 Nmul_A2753 Nitrosospira multiformis ATCC 25196 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_413432.1 3156075 R 323848 CDS YP_413433.1 82703867 3785348 complement(3156759..3157214) 1 NC_007614.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3157214 3785348 Nmul_A2754 Nitrosospira multiformis ATCC 25196 3-dehydroquinate dehydratase YP_413433.1 3156759 R 323848 CDS YP_413434.1 82703868 3785350 complement(3158935..3159228) 1 NC_007614.1 hypothetical protein 3159228 3785350 Nmul_A2755 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413434.1 3158935 R 323848 CDS YP_413435.1 82703869 3785351 3160008..3160799 1 NC_007614.1 hypothetical protein 3160799 3785351 Nmul_A2756 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413435.1 3160008 D 323848 CDS YP_413436.1 82703870 3785352 3161889..3162167 1 NC_007614.1 hypothetical protein 3162167 3785352 Nmul_A2757 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413436.1 3161889 D 323848 CDS YP_413437.1 82703871 3785353 3162333..3163676 1 NC_007614.1 major facilitator transporter 3163676 3785353 Nmul_A2758 Nitrosospira multiformis ATCC 25196 major facilitator transporter YP_413437.1 3162333 D 323848 CDS YP_413438.1 82703872 3785354 complement(3163838..3164398) 1 NC_007614.1 hypothetical protein 3164398 3785354 Nmul_A2759 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413438.1 3163838 R 323848 CDS YP_413439.1 82703873 3785355 complement(3164766..3166874) 1 NC_007614.1 cytochrome c, class I 3166874 3785355 Nmul_A2760 Nitrosospira multiformis ATCC 25196 cytochrome c, class I YP_413439.1 3164766 R 323848 CDS YP_413440.1 82703874 3785356 complement(3166871..3167296) 1 NC_007614.1 copper resistance protein CopC 3167296 3785356 Nmul_A2761 Nitrosospira multiformis ATCC 25196 copper resistance protein CopC YP_413440.1 3166871 R 323848 CDS YP_413441.1 82703875 3785357 complement(3167578..3168234) 1 NC_007614.1 hypothetical protein 3168234 3785357 Nmul_A2762 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413441.1 3167578 R 323848 CDS YP_413442.1 82703876 3785358 complement(3168318..3168908) 1 NC_007614.1 similar to Nitrosospira sp. NpAV ORF4 in GenBank Accession Number U92432; hypothetical protein 3168908 3785358 Nmul_A2763 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413442.1 3168318 R 323848 CDS YP_413443.1 82703877 3785359 complement(3169090..3170334) 1 NC_007614.1 monooxygenase subunit B protein 3170334 3785359 Nmul_A2764 Nitrosospira multiformis ATCC 25196 monooxygenase subunit B protein YP_413443.1 3169090 R 323848 CDS YP_413444.1 82703878 3785360 complement(3170335..3171159) 1 NC_007614.1 ammonia monooxygenase 3171159 3785360 Nmul_A2765 Nitrosospira multiformis ATCC 25196 ammonia monooxygenase YP_413444.1 3170335 R 323848 CDS YP_413445.1 82703879 3785361 complement(3171483..3172313) 1 NC_007614.1 ammonia monooxygenase/methane monooxygenase subunit C 3172313 3785361 Nmul_A2766 Nitrosospira multiformis ATCC 25196 ammonia monooxygenase/methane monooxygenase subunit C YP_413445.1 3171483 R 323848 CDS YP_413446.1 82703880 3785362 complement(3172696..3173553) 1 NC_007614.1 parB-like partition proteins 3173553 3785362 Nmul_A2767 Nitrosospira multiformis ATCC 25196 parB-like partition proteins YP_413446.1 3172696 R 323848 CDS YP_413447.1 82703881 3785363 complement(3173559..3174371) 1 NC_007614.1 cobyrinic acid a,c-diamide synthase 3174371 3785363 Nmul_A2768 Nitrosospira multiformis ATCC 25196 cobyrinic acid a,c-diamide synthase YP_413447.1 3173559 R 323848 CDS YP_413448.1 82703882 3785364 complement(3174450..3175100) 1 NC_007614.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 3175100 gidB 3785364 gidB Nitrosospira multiformis ATCC 25196 16S rRNA methyltransferase GidB YP_413448.1 3174450 R 323848 CDS YP_413449.2 162139859 3785365 complement(3175097..3176995) 1 NC_007614.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3176995 3785365 Nmul_A2770 Nitrosospira multiformis ATCC 25196 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_413449.2 3175097 R 323848 CDS YP_413450.1 82703884 3785621 3177212..3177598 1 NC_007614.1 transposase 3177598 3785621 Nmul_A2771 Nitrosospira multiformis ATCC 25196 transposase YP_413450.1 3177212 D 323848 CDS YP_413451.1 82703885 3785622 3177595..3177915 1 NC_007614.1 hypothetical protein 3177915 3785622 Nmul_A2772 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413451.1 3177595 D 323848 CDS YP_413452.1 82703886 3785623 complement(3178343..3178588) 1 NC_007614.1 hypothetical protein 3178588 3785623 Nmul_A2773 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413452.1 3178343 R 323848 CDS YP_413453.1 82703887 3785624 3179899..3180189 1 NC_007614.1 hypothetical protein 3180189 3785624 Nmul_A2774 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413453.1 3179899 D 323848 CDS YP_413454.1 82703888 3785625 complement(3180223..3181581) 1 NC_007614.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 3181581 trmE 3785625 trmE Nitrosospira multiformis ATCC 25196 tRNA modification GTPase TrmE YP_413454.1 3180223 R 323848 CDS YP_413455.1 82703889 3785626 complement(3181656..3183365) 1 NC_007614.1 60 kDa inner membrane insertion protein 3183365 3785626 Nmul_A2776 Nitrosospira multiformis ATCC 25196 60 kDa inner membrane insertion protein YP_413455.1 3181656 R 323848 CDS YP_413456.1 82703890 3785627 complement(3183417..3183632) 1 NC_007614.1 hypothetical protein 3183632 3785627 Nmul_A2777 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413456.1 3183417 R 323848 CDS YP_413457.1 82703891 3785628 complement(3183629..3183889) 1 NC_007614.1 ribonuclease P protein component 3183889 3785628 Nmul_A2778 Nitrosospira multiformis ATCC 25196 ribonuclease P protein component YP_413457.1 3183629 R 323848 CDS YP_413458.1 82703892 3785629 complement(3183998..3184135) 1 NC_007614.1 50S ribosomal protein L34 3184135 3785629 Nmul_A2779 Nitrosospira multiformis ATCC 25196 50S ribosomal protein L34 YP_413458.1 3183998 R 323848 CDS YP_413459.1 82703894 3786763 850..1188 1 NC_007615.1 mobilization protein 1188 3786763 Nmul_B2796 Nitrosospira multiformis ATCC 25196 mobilization protein YP_413459.1 850 D 323848 CDS YP_413460.1 82703895 3786764 1172..2368 1 NC_007615.1 relaxase/mobilization nuclease domain-containing protein 2368 3786764 Nmul_B2797 Nitrosospira multiformis ATCC 25196 relaxase/mobilization nuclease domain-containing protein YP_413460.1 1172 D 323848 CDS YP_413461.1 82703896 3786765 2371..2787 1 NC_007615.1 hypothetical protein 2787 3786765 Nmul_B2798 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413461.1 2371 D 323848 CDS YP_413462.1 82703897 3786766 3066..4604 1 NC_007615.1 hypothetical protein 4604 3786766 Nmul_B2799 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413462.1 3066 D 323848 CDS YP_413463.1 82703898 3786767 4601..5188 1 NC_007615.1 hypothetical protein 5188 3786767 Nmul_B2800 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413463.1 4601 D 323848 CDS YP_413464.1 82703899 3786768 complement(5288..5632) 1 NC_007615.1 plasmid stabilization system protein 5632 3786768 Nmul_B2801 Nitrosospira multiformis ATCC 25196 plasmid stabilization system protein YP_413464.1 5288 R 323848 CDS YP_413465.1 82703900 3786769 complement(5629..5874) 1 NC_007615.1 prevent-host-death protein 5874 3786769 Nmul_B2802 Nitrosospira multiformis ATCC 25196 prevent-host-death protein YP_413465.1 5629 R 323848 CDS YP_413466.1 82703901 3786770 6171..6557 1 NC_007615.1 hypothetical protein 6557 3786770 Nmul_B2803 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413466.1 6171 D 323848 CDS YP_413467.1 82703902 3786771 6554..6907 1 NC_007615.1 XRE family transcriptional regulator 6907 3786771 Nmul_B2804 Nitrosospira multiformis ATCC 25196 XRE family transcriptional regulator YP_413467.1 6554 D 323848 CDS YP_413468.1 82703903 3786772 7010..7381 1 NC_007615.1 XRE family transcriptional regulator 7381 3786772 Nmul_B2805 Nitrosospira multiformis ATCC 25196 XRE family transcriptional regulator YP_413468.1 7010 D 323848 CDS YP_413469.1 82703904 3786773 complement(7404..8837) 1 NC_007615.1 hypothetical protein 8837 3786773 Nmul_B2806 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413469.1 7404 R 323848 CDS YP_413470.1 82703905 3786774 9045..10016 1 NC_007615.1 Phage integrase 10016 3786774 Nmul_B2807 Nitrosospira multiformis ATCC 25196 Phage integrase YP_413470.1 9045 D 323848 CDS YP_413471.1 82703906 3786775 complement(10897..15696) 1 NC_007615.1 peptidase C39, bacteriocin processing 15696 3786775 Nmul_B2808 Nitrosospira multiformis ATCC 25196 peptidase C39, bacteriocin processing YP_413471.1 10897 R 323848 CDS YP_413472.1 82703907 3786776 complement(15807..16472) 1 NC_007615.1 hypothetical protein 16472 3786776 Nmul_B2809 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413472.1 15807 R 323848 CDS YP_413473.1 82703908 3786777 16775..17470 1 NC_007615.1 ParA protein, putative 17470 3786777 Nmul_B2810 Nitrosospira multiformis ATCC 25196 ParA protein, putative YP_413473.1 16775 D 323848 CDS YP_413474.1 82703909 3786778 17463..17816 1 NC_007615.1 hypothetical protein 17816 3786778 Nmul_B2811 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413474.1 17463 D 323848 CDS YP_413475.1 82703910 3786779 17830..18870 1 NC_007615.1 hypothetical protein 18870 3786779 Nmul_B2812 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413475.1 17830 D 323848 CDS YP_413476.1 82703912 3786780 673..1593 1 NC_007616.1 hypothetical protein 1593 3786780 NmulC_2780 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413476.1 673 D 323848 CDS YP_413477.1 82703913 3786781 complement(1653..2528) 1 NC_007616.1 hypothetical protein 2528 3786781 NmulC_2781 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413477.1 1653 R 323848 CDS YP_413478.1 82703914 3786782 complement(2521..2841) 1 NC_007616.1 helix-hairpin-helix DNA-binding motif-containing protein 2841 3786782 NmulC_2782 Nitrosospira multiformis ATCC 25196 helix-hairpin-helix DNA-binding motif-containing protein YP_413478.1 2521 R 323848 CDS YP_413479.1 82703915 3786783 complement(3476..4297) 1 NC_007616.1 integrase catalytic subunit 4297 3786783 NmulC_2783 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_413479.1 3476 R 323848 CDS YP_413480.1 82703916 3786784 complement(4291..4557) 1 NC_007616.1 transposase IS3/IS911 4557 3786784 NmulC_2784 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_413480.1 4291 R 323848 CDS YP_413481.1 82703917 3786785 complement(5108..6079) 1 NC_007616.1 BsuBI/PstI restriction endonuclease, C-terminal 6079 3786785 NmulC_2785 Nitrosospira multiformis ATCC 25196 BsuBI/PstI restriction endonuclease, C-terminal YP_413481.1 5108 R 323848 CDS YP_413482.1 82703918 3786786 complement(6076..7590) 1 NC_007616.1 hypothetical protein 7590 3786786 NmulC_2786 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413482.1 6076 R 323848 CDS YP_413483.1 82703919 3786787 complement(7748..8062) 1 NC_007616.1 hypothetical protein 8062 3786787 NmulC_2787 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413483.1 7748 R 323848 CDS YP_413484.1 82703920 3786788 complement(8049..8699) 1 NC_007616.1 cobyrinic acid a,c-diamide synthase 8699 3786788 NmulC_2788 Nitrosospira multiformis ATCC 25196 cobyrinic acid a,c-diamide synthase YP_413484.1 8049 R 323848 CDS YP_413485.1 82703921 3786789 9223..10275 1 NC_007616.1 hypothetical protein 10275 3786789 NmulC_2789 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413485.1 9223 D 323848 CDS YP_413486.1 82703922 3786790 complement(10306..11979) 1 NC_007616.1 relaxase/mobilization nuclease domain-containing protein 11979 3786790 NmulC_2790 Nitrosospira multiformis ATCC 25196 relaxase/mobilization nuclease domain-containing protein YP_413486.1 10306 R 323848 CDS YP_413487.1 82703923 3786791 complement(11976..12308) 1 NC_007616.1 mobilization protein 12308 3786791 NmulC_2791 Nitrosospira multiformis ATCC 25196 mobilization protein YP_413487.1 11976 R 323848 CDS YP_413488.1 82703924 3786792 13350..13661 1 NC_007616.1 hypothetical protein 13661 3786792 NmulC_2792 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413488.1 13350 D 323848 CDS YP_413489.1 82703925 3786793 13678..15663 1 NC_007616.1 TRAG protein 15663 3786793 NmulC_2793 Nitrosospira multiformis ATCC 25196 TRAG protein YP_413489.1 13678 D 323848 CDS YP_413490.1 82703926 3786794 15653..16426 1 NC_007616.1 hypothetical protein 16426 3786794 NmulC_2794 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413490.1 15653 D 323848 CDS YP_413491.1 82703927 3786795 complement(16723..16968) 1 NC_007616.1 resolvase family site-specific recombinase 16968 3786795 NmulC_2795 Nitrosospira multiformis ATCC 25196 resolvase family site-specific recombinase YP_413491.1 16723 R 323848 CDS YP_413492.1 82703929 3786796 890..1444 1 NC_007617.1 resolvase-like protein 1444 3786796 Nmul_D2813 Nitrosospira multiformis ATCC 25196 resolvase-like protein YP_413492.1 890 D 323848 CDS YP_413493.1 82703930 3786797 complement(1517..1858) 1 NC_007617.1 XRE family transcriptional regulator 1858 3786797 Nmul_D2814 Nitrosospira multiformis ATCC 25196 XRE family transcriptional regulator YP_413493.1 1517 R 323848 CDS YP_413494.1 82703931 3786798 complement(1833..2219) 1 NC_007617.1 hypothetical protein 2219 3786798 Nmul_D2815 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413494.1 1833 R 323848 CDS YP_413495.1 82703932 3786799 2376..3008 1 NC_007617.1 plasmid partition protein ParA-like 3008 3786799 Nmul_D2816 Nitrosospira multiformis ATCC 25196 plasmid partition protein ParA-like YP_413495.1 2376 D 323848 CDS YP_413496.1 82703933 3786800 3427..4659 1 NC_007617.1 plasmid replication initiator protein-like 4659 3786800 Nmul_D2817 Nitrosospira multiformis ATCC 25196 plasmid replication initiator protein-like YP_413496.1 3427 D 323848 CDS YP_413497.1 82703934 3786801 complement(5821..6252) 1 NC_007617.1 hypothetical protein 6252 3786801 Nmul_D2818 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413497.1 5821 R 323848 CDS YP_413498.1 82703935 3786802 6452..8053 1 NC_007617.1 MobA/MobL protein 8053 3786802 Nmul_D2819 Nitrosospira multiformis ATCC 25196 MobA/MobL protein YP_413498.1 6452 D 323848 CDS YP_413499.1 82703941 3786808 complement(8117..9061) 1 NC_007617.1 peptidase S1 and S6, chymotrypsin/Hap 9061 3786808 Nmul_D2825 Nitrosospira multiformis ATCC 25196 peptidase S1 and S6, chymotrypsin/Hap YP_413499.1 8117 R 323848 CDS YP_413500.1 82703942 3786809 complement(9505..10194) 1 NC_007617.1 hypothetical protein 10194 3786809 Nmul_D2826 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413500.1 9505 R 323848 CDS YP_413501.1 82703936 3786803 10236..10499 1 NC_007617.1 transposase IS3/IS911 10499 3786803 Nmul_D2820 Nitrosospira multiformis ATCC 25196 transposase IS3/IS911 YP_413501.1 10236 D 323848 CDS YP_413502.1 82703937 3786804 10526..11356 1 NC_007617.1 integrase catalytic subunit 11356 3786804 Nmul_D2821 Nitrosospira multiformis ATCC 25196 integrase catalytic subunit YP_413502.1 10526 D 323848 CDS YP_413503.1 82703943 3786810 complement(11394..12149) 1 NC_007617.1 hypothetical protein 12149 3786810 Nmul_D2827 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413503.1 11394 R 323848 CDS YP_413504.1 82703940 3786807 12615..12950 1 NC_007617.1 XRE family transcriptional regulator 12950 3786807 Nmul_D2824 Nitrosospira multiformis ATCC 25196 XRE family transcriptional regulator YP_413504.1 12615 D 323848 CDS YP_413505.1 82703938 3786805 12958..13674 1 NC_007617.1 hypothetical protein 13674 3786805 Nmul_D2822 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413505.1 12958 D 323848 CDS YP_413506.1 82703939 3786806 13799..14086 1 NC_007617.1 hypothetical protein 14086 3786806 Nmul_D2823 Nitrosospira multiformis ATCC 25196 hypothetical protein YP_413506.1 13799 D 323848 CDS