-- dump date 20140619_165431 -- class Genbank::CDS -- table cds_note -- id note NP_478209.1 transposase; unknown protein NP_478221.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA NP_478222.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA NP_478262.1 sigB gene product NP_478268.1 smtB gene product NP_478275.1 probable ion channel; unknown protein NP_478302.1 similar to mobilization protein MobD; unknown protein NP_478313.1 probable cell division protein FtsK; unknown protein NP_478318.1 similar to phage endolysin; unknown protein NP_478327.1 ; unknown protein NP_478426.1 ORF_ID:alr8001 NP_478427.1 ORF_ID:all8002; unknown protein NP_478428.1 ORF_ID:all8003; unknown protein NP_478429.1 ORF_ID:all8004; unknown protein NP_478430.1 ORF_ID:alr8005; unknown protein NP_478431.1 ORF_ID:alr8006 NP_478432.1 ORF_ID:alr8007 NP_478433.1 ORF_ID:asr8008; unknown protein NP_478434.1 ORF_ID:asl8009; unknown protein NP_478435.1 ORF_ID:all8010 NP_478436.1 ORF_ID:alr8011; sugar-non-specific nuclease NucA homolog NP_478437.1 ORF_ID:asr8012 NP_478438.1 ORF_ID:all8013; nuclease inhibitor homolog NP_478439.1 ORF_ID:alr8014; hypothetical protein NP_478440.1 ORF_ID:alr8015; probable ATPase NP_478441.1 ORF_ID:alr8016 NP_478442.1 ORF_ID:alr8017; hypothetical protein; crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown NP_478443.1 ORF_ID:asl8018; unknown protein NP_478444.1 ORF_ID:alr8019; transposase; unknown protein NP_478445.1 ORF_ID:all8020; similar to 8R-lipoxygenase-allene oxide synthase fusion protein NP_478446.1 ORF_ID:asl8021; unknown protein NP_478447.1 ORF_ID:all8022; unknown protein NP_478448.1 ORF_ID:all8023; unknown protein NP_478449.1 ORF_ID:all8024; hypothetical protein NP_478450.1 ORF_ID:alr8025; unknown protein NP_478451.1 ORF_ID:all8026; vapC gene product NP_478452.1 ORF_ID:asl8027; unknown protein NP_478453.1 ORF_ID:asl8028; unknown protein NP_478454.1 ORF_ID:alr8029 NP_478455.1 ORF_ID:all8030; unknown protein NP_478456.1 ORF_ID:all8031; unknown protein NP_478457.1 ORF_ID:all8032; unknown protein NP_478458.1 ORF_ID:alr8033; unknown protein NP_478459.1 ORF_ID:alr8034; similar to mobilization protein TraI NP_478460.1 ORF_ID:all8035; unknown protein NP_478461.1 ORF_ID:all8036; unknown protein NP_478462.1 ORF_ID:all8037; unknown protein NP_478463.1 ORF_ID:all8038; unknown protein NP_478464.1 ORF_ID:all8039; unknown protein NP_478465.1 ORF_ID:all8040; unknown protein NP_478466.1 ORF_ID:all8041; unknown protein NP_478467.1 ORF_ID:asr8042; unknown protein NP_478468.1 ORF_ID:all8043; unknown protein NP_478469.1 ORF_ID:all8044; unknown protein NP_478470.1 ORF_ID:all8045; unknown protein NP_478471.1 ORF_ID:all8046; unknown protein NP_478472.1 ORF_ID:all8047; unknown protein NP_478473.1 ORF_ID:all8048; unknown protein NP_478474.1 ORF_ID:asl8049; unknown protein NP_478475.1 ORF_ID:asl8050; copB gene product NP_478476.1 ORF_ID:alr8051; unknown protein NP_478477.1 ORF_ID:alr8052; unknown protein NP_478478.1 ORF_ID:asr8053; unknown protein NP_478479.1 ORF_ID:asr8054; unknown protein NP_478480.1 ORF_ID:asl8055; unknown protein NP_478481.1 ORF_ID:alr8056; unknown protein NP_478482.1 ORF_ID:asr8057; unknown protein NP_478483.1 ORF_ID:alr8058; unknown protein NP_478484.1 ORF_ID:alr8059; unknown protein NP_478485.1 ORF_ID:alr8060; unknown protein NP_478486.1 ORF_ID:alr8061; unknown protein NP_478487.1 ORF_ID:all8062; unknown protein NP_478488.1 ORF_ID:all8063; unknown protein NP_478489.1 ORF_ID:all8064; similar to H repeat-associated protein NP_478490.1 ORF_ID:all8065 NP_478491.1 ORF_ID:alr8066; hypothetical protein NP_478492.1 ORF_ID:all8067; unknown protein NP_478493.1 ORF_ID:all8068; hypothetical protein NP_478494.1 ORF_ID:all8069; transposase; unknown protein NP_478495.1 ORF_ID:all8070 NP_478496.1 ORF_ID:alr8071 NP_478497.1 ORF_ID:asl8072; probable transcriptional regulator NP_478498.1 ORF_ID:alr8073; hypothetical protein NP_478499.1 ORF_ID:alr8074; hypothetical protein NP_478500.1 ORF_ID:all8075; probable helicase NP_478501.1 ORF_ID:all8076; unknown protein NP_478502.1 Probable GTPase engC protein 2; EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity NP_478503.1 ORF_ID:all8078; unknown protein NP_478504.1 ORF_ID:all8079; unknown protein NP_478505.1 ORF_ID:all8080; unknown protein NP_478506.1 ORF_ID:asl8081; unknown protein NP_478507.1 ORF_ID:asr8082; unknown protein NP_478508.1 ORF_ID:all8083; hypothetical protein NP_478509.1 ORF_ID:asl8084; unknown protein NP_478510.1 ORF_ID:all8085; hypothetical protein NP_478511.1 ORF_ID:all8086 NP_478512.1 ORF_ID:all8087 NP_478513.1 ORF_ID:all8088 NP_478514.1 ORF_ID:all8089 NP_478515.1 ORF_ID:all8090 NP_484048.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit NP_484049.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit NP_484050.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex NP_484051.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel. NP_484052.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. NP_484053.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 NP_484054.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 NP_484055.1 ORF_ID:all0011 NP_484059.1 ORF_ID:all0015 NP_484060.1 ORF_ID:all0016 NP_484062.1 ORF_ID:alr0018 NP_484063.1 ORF_ID:alr0019 NP_484064.1 ORF_ID:alr0020 NP_484065.1 ORF_ID:alr0021 NP_484066.1 ORF_ID:alr0022 NP_484067.1 ORF_ID:asr0023 NP_484073.1 ORF_ID:alr0029 NP_484074.1 similar to Mg-protoporphyrin IX monomethyl ester oxidative cyclase NP_484075.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose NP_484076.1 synthesizes isochorismate acid from chorismate NP_484077.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate NP_484078.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate NP_484079.1 ORF_ID:alr0035 NP_484080.1 ORF_ID:all0036 NP_484082.1 ORF_ID:alr0038 NP_484083.1 hydrolase NP_484093.2 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange NP_484095.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate NP_484096.1 ORF_ID:alr0052 NP_484100.1 similar to DOPA-dioxygenase NP_484102.1 Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes NP_484105.1 ORF_ID:all0061 NP_484107.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock NP_484110.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis NP_484111.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide NP_484112.1 ORF_ID:alr0068 NP_484113.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs NP_484114.1 ORF_ID:all0070 NP_484116.1 ORF_ID:alr0072 NP_484117.1 ORF_ID:alr0073 NP_484118.1 glycosyl transferase NP_484121.1 ORF_ID:alr0077 NP_484123.1 ORF_ID:alr0079 NP_484126.1 ORF_ID:all0082 NP_484127.1 fdxN element excision controlling factor XisH homolog NP_484128.1 fdxN element excision controlling factor XisI homolog NP_484130.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall NP_484131.1 functions in MreBCD complex in some organisms NP_484132.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA NP_484135.1 ORF_ID:alr0091 NP_484136.1 ORF_ID:alr0092 NP_484137.1 ORF_ID:alr0093 NP_484138.1 converts L-glutamate to D-glutamate, a component of peptidoglycan NP_484140.1 ORF_ID:alr0096 NP_484150.1 Essential for recycling GMP and indirectly, cGMP NP_484151.1 ORF_ID:all0107 NP_484152.1 Enables the organization of the psaE and psaF subunits NP_484153.1 ORF_ID:all0109 NP_484154.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity NP_484155.1 ORF_ID:all0111 NP_484159.1 ORF_ID:alr0115 NP_484161.1 ORF_ID:alr0117 NP_484164.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF NP_484165.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane NP_484166.1 ORF_ID:all0122 NP_484168.1 ORF_ID:alr0124 NP_484169.1 ORF_ID:asl0125 NP_484170.1 ORF_ID:all0126 NP_484172.1 ORF_ID:alr0128 NP_484173.1 ORF_ID:all0129 NP_484180.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins NP_484181.1 Ycf8; may be involved in the formation and/or stabilization of PSII system complexes NP_484182.1 ORF_ID:all0138 NP_484184.1 ORF_ID:alr0140 NP_484185.1 ORF_ID:alr0141 NP_484186.1 ORF_ID:alr0142 NP_484190.1 involved in the peptidyltransferase reaction during translation NP_484191.1 ORF_ID:all0147 NP_484196.1 ORF_ID:all0152 NP_484197.1 ORF_ID:alr0153 NP_484198.1 ORF_ID:all0154 NP_484203.1 probable glycosyl transferase NP_484204.1 probable glycosyl transferase NP_484205.1 ORF_ID:all0161 NP_484210.1 ORF_ID:all0166 NP_484211.1 ORF_ID:all0167 NP_484212.1 ORF_ID:all0168 NP_484213.1 ORF_ID:alr0169 NP_484214.1 ORF_ID:all0170 NP_484218.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active NP_484219.1 ORF_ID:alr0175 NP_484221.1 ORF_ID:all0177 NP_484222.1 ORF_ID:all0178 NP_484224.1 ORF_ID:alr0180 NP_484226.1 ORF_ID:all0182 NP_484231.1 ORF_ID:all0187 NP_484232.1 ORF_ID:alr0188 NP_484234.1 ORF_ID:alr0190 NP_484236.1 ORF_ID:all0192 NP_484237.1 ORF_ID:all0193 NP_484249.1 ORF_ID:alr0205 NP_484254.1 ORF_ID:all0210 NP_484256.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate NP_484257.1 ORF_ID:alr0213 NP_484261.1 similar to pathogenesis related protein NP_484262.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) NP_484264.1 ORF_ID:all0220 NP_484266.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate NP_484267.1 Catalyzes the transfer of electrons from NADH to quinone NP_484268.1 Catalyzes the transfer of electrons from NADH to quinone NP_484269.1 Catalyzes the transfer of electrons from NADH to quinone NP_484270.1 Catalyzes the transfer of electrons from NADH to quinone NP_484271.1 Probable inorganic polyphosphate/ATP-NAD kinase 2; catalyzes the phosphorylation of NAD to NADP NP_484277.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content NP_484281.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides NP_484282.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY NP_484283.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs NP_484284.1 ORF_ID:alr0240 NP_484285.1 acyltransferase NP_484291.1 ORF_ID:alr0247 NP_484293.1 ORF_ID:alr0249 NP_484296.1 ORF_ID:alr0252 NP_484297.1 similar to cytochrome b6 NP_484300.1 ORF_ID:asl0256 NP_484302.1 participates in electron transfer in photosystem I NP_484303.1 low-potential cytochrome c; with PsbO, PsbP, PsbQ, and PsbU makes up the oxygen-evolving complex of photosystem II NP_484305.1 ORF_ID:all0261 NP_484306.1 ORF_ID:all0262 NP_484308.1 ORF_ID:alr0264 NP_484309.1 ORF_ID:all0265 NP_484310.1 ORF_ID:all0266 NP_484313.1 ORF_ID:all0269 NP_484314.1 ORF_ID:all0270 NP_484315.1 metalloprotease all0271 NP_484317.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1 NP_484319.1 ORF_ID:all0275 NP_484321.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen NP_484322.1 ORF_ID:all0278 NP_484324.1 ORF_ID:alr0280 NP_484327.1 ORF_ID:all0283 NP_484328.1 ORF_ID:all0284 NP_484329.1 ORF_ID:all0285 NP_484330.1 ORF_ID:alr0286 NP_484331.1 ORF_ID:all0287 NP_484332.1 hydrolase NP_484334.1 similar to s-layer associated multidomain endoglucanase NP_484339.1 ORF_ID:alr0295 NP_484343.1 ORF_ID:alr0299 NP_484350.1 ORF_ID:all0306 NP_484352.1 ORF_ID:alr0308 NP_484356.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis NP_484358.1 ORF_ID:all0314 NP_484359.1 ORF_ID:all0315 NP_484360.1 ORF_ID:all0316 NP_484361.1 ORF_ID:alr0317 NP_484362.1 ORF_ID:alr0318 NP_484364.1 ORF_ID:all0320 NP_484365.1 ORF_ID:all0321 NP_484366.1 ORF_ID:all0322 NP_484367.1 ORF_ID:all0323 NP_484372.1 catalyzes the formation of anthranilate and glutamate from chorismate and glutamine NP_484373.1 ORF_ID:all0329 NP_484374.1 ORF_ID:all0330 NP_484379.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) NP_484386.1 ORF_ID:all0342 NP_484388.1 ORF_ID:alr0344 NP_484389.1 ORF_ID:all0345 NP_484390.1 ORF_ID:alr0346 NP_484392.1 shuttles electrons from NAD(P)H, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunit D, with NdhB and NdhF are core membrane components NP_484396.1 ORF_ID:all0352 NP_484397.1 ORF_ID:alr0353 NP_484398.1 ORF_ID:alr0354 NP_484399.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance NP_484400.1 ORF_ID:alr0356 NP_484401.1 ORF_ID:alr0357 NP_484406.1 ORF_ID:all0362 NP_484407.1 ORF_ID:all0363 NP_484408.1 similar to prohormone convertase NP_484415.1 probable integral membrane efflux protein NP_484416.1 ORF_ID:all0372 NP_484417.1 ORF_ID:all0373 NP_484418.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine NP_484419.1 plays an essential role in ATP-dependent branch migration of the Holliday junction NP_484420.1 ORF_ID:all0376 NP_484422.1 ORF_ID:all0378 NP_484423.1 Cobalamin synthase; catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole NP_484431.2 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome NP_484432.1 ORF_ID:all0388 NP_484433.1 ORF_ID:all0389 NP_484436.1 probable monooxygenase NP_484439.1 ORF_ID:all0395 NP_484440.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde NP_484441.1 similar to ferric aerobactin receptor NP_484448.1 ATP-dependent Clp protease adapter protein clpS; involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA NP_484452.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; involved in carboxysome formation NP_484453.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate NP_484454.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate NP_484455.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis NP_484456.1 zinc-binding oxidoreductase NP_484457.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water NP_484458.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II NP_484461.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis NP_484462.1 ORF_ID:all0418 NP_484470.1 ORF_ID:all0426 NP_484471.1 ORF_ID:all0427 NP_484472.1 ORF_ID:alr0428 NP_484473.1 ORF_ID:alr0429 NP_484474.1 probable short-chain dehydrogenase NP_484482.1 ORF_ID:all0438 NP_484483.1 ORF_ID:all0439 NP_484485.1 ORF_ID:all0441 NP_484486.1 ORF_ID:alr0442 NP_484491.1 ORF_ID:alr0447 NP_484493.1 ORF_ID:asl0449 NP_484494.1 ORF_ID:all0450 NP_484497.1 ORF_ID:all0453 NP_484499.1 ORF_ID:all0455 NP_484500.2 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate NP_484501.1 Uncharacterized low temperature-induced protein all0457. NP_484502.1 Uncharacterized low temperature-induced protein all0458. NP_484519.1 probable short-chain dehydrogenase NP_484521.1 ORF_ID:alr0477 NP_484522.1 ORF_ID:all0478 NP_484527.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains NP_484528.1 Ycf92-like protein. NP_484532.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate NP_484533.1 helicase NP_484542.1 ORF_ID:all0498 NP_484543.1 ORF_ID:alr0499 NP_484553.1 ORF_ID:alr0509 NP_484554.1 ORF_ID:alr0510 NP_484556.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era NP_484558.1 ORF_ID:asl0514 NP_484561.1 ORF_ID:alr0517 NP_484564.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 NP_484565.1 ORF_ID:all0521 NP_484566.1 probable pseudouridine synthase NP_484567.1 ORF_ID:alr0523 NP_484568.1 ORF_ID:alr0524 NP_484569.1 ORF_ID:alr0525 NP_484570.1 ORF_ID:alr0526 NP_484571.1 ORF_ID:alr0527 NP_484572.1 ORF_ID:alr0528 NP_484573.1 ORF_ID:alr0529 NP_484574.1 ORF_ID:alr0530 NP_484575.1 ORF_ID:asr0531 NP_484576.1 ORF_ID:alr0532 NP_484577.1 ORF_ID:alr0533 NP_484578.1 ORF_ID:alr0534 NP_484579.1 ORF_ID:alr0535 NP_484580.1 ORF_ID:alr0536 NP_484581.1 ORF_ID:alr0537 NP_484582.1 probable methyltransferase NP_484584.1 ORF_ID:alr0540 NP_484586.1 ORF_ID:all0542 NP_484587.1 ORF_ID:alr0543 NP_484589.1 probable pseudouridine synthase NP_484590.1 ORF_ID:alr0546 NP_484591.1 probable protein phosphatase NP_484592.1 ORF_ID:alr0548 NP_484593.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown NP_484596.1 ORF_ID:alr0552 NP_484597.1 ORF_ID:alr0553 NP_484599.1 acetyltransferase NP_484600.1 ORF_ID:alr0556 NP_484601.1 probable glycosyltransferase NP_484602.1 probable glycosyltransferase NP_484604.1 similar to XisI protein NP_484605.1 similar to XisI protein NP_484607.1 ORF_ID:all0563 NP_484613.1 iron-sulfur cluster binding protein homolog NP_484614.1 ORF_ID:alr0570 NP_484615.1 ORF_ID:all0571 NP_484617.1 ORF_ID:alr0573 NP_484618.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive NP_484621.1 ORF_ID:alr0577 NP_484622.1 unwinds double stranded DNA; these Mycobacterial enzymes appear to contain inteins NP_484623.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk NP_484624.1 glyoxalase II NP_484627.1 ORF_ID:alr0583 NP_484628.1 probable glycosyl transferase NP_484629.1 probable glycosyl transferase NP_484632.1 ORF_ID:asl0588 NP_484634.1 ORF_ID:alr0590 NP_484638.1 ORF_ID:all0594 NP_484639.1 similar to cytochrome d oxidase chain I NP_484643.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate NP_484646.1 ORF_ID:all0602 NP_484647.1 transcriptional regulator NP_484650.1 ORF_ID:all0606 NP_484651.1 ferredoxin-dependent assimilatory nitrite reductase NP_484652.1 ORF_ID:alr0608 NP_484653.1 ORF_ID:alr0609 NP_484654.1 ORF_ID:alr0610 NP_484655.1 ORF_ID:alr0611 NP_484656.1 ORF_ID:alr0612 NP_484667.1 ORF_ID:all0623 NP_484668.1 ORF_ID:all0624 NP_484670.1 ORF_ID:all0626 NP_484679.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_484681.1 ORF_ID:all0637 NP_484682.1 ORF_ID:all0638 NP_484684.1 ORF_ID:all0640 NP_484686.1 ORF_ID:alr0642 NP_484687.1 ORF_ID:alr0643 NP_484690.1 Protein thf1; Psb29; involved in biogenesis of the photosystem II; in Arabidopsis it interacts with the heterotrimeric G-protein (GPA1) and seems to be involved in a D-glucose signaling mechanism between plastid and the plasma membranes NP_484692.1 probable anti-sigma factor antagonist NP_484694.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis NP_484696.1 mrp protein homolog NP_484697.1 similar to rod shape-determining protein NP_484700.1 ORF_ID:alr0656 NP_484701.1 ORF_ID:alr0657 NP_484702.1 ORF_ID:alr0658 NP_484703.1 probable transcription regulator NP_484705.1 ORF_ID:all0661 NP_484707.1 alpha-amylase NP_484708.1 ORF_ID:all0664 NP_484715.1 ORF_ID:alr0671 NP_484716.1 similar to vanadium chloroperoxidase NP_484717.1 similar to integrase NP_484720.1 ORF_ID:all0687 NP_484721.1 ORF_ID:alr0677 NP_484722.1 similar to integrase NP_484731.1 ORF_ID:all0688 NP_484735.1 similar to NifU protein NP_484737.1 ORF_ID:alr0694 NP_484738.1 ORF_ID:asr0695 NP_484739.1 ORF_ID:alr0696 NP_484740.1 probable 4-oxalocrotonate tautomerase NP_484741.1 ORF_ID:alr0698 NP_484742.1 ORF_ID:alr0699 NP_484743.1 ORF_ID:alr0700 NP_484745.1 ORF_ID:alr0702 NP_484749.1 probable amidase NP_484750.1 ORF_ID:all0707 NP_484752.1 ORF_ID:alr0709 NP_484753.1 ORF_ID:alr0710 NP_484756.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain NP_484761.1 ORF_ID:alr0718 NP_484766.1 probable GTP-binding protein; translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 NP_484770.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate NP_484772.1 ORF_ID:all0729 NP_484774.1 ORF_ID:alr0731 NP_484775.1 ORF_ID:all0732 NP_484776.1 involved in the assembly of the urease metallocenter; possible nickel donor NP_484777.1 ORF_ID:alr0734 NP_484778.1 ORF_ID:alr0735 NP_484780.1 ORF_ID:all0737 NP_484781.1 ORF_ID:alr0738 NP_484784.1 ORF_ID:alr0741 NP_484785.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA NP_484786.1 ORF_ID:all0743 NP_484788.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc) NP_484790.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; involved in carboxysome formation NP_484792.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence NP_484794.1 with HoxF and HoxU catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution NP_484795.1 ORF_ID:alr0752 NP_484802.1 ORF_ID:all0759 NP_484805.1 with HoxF and HoxE catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution NP_484807.1 ORF_ID:alr0764 NP_484809.1 ORF_ID:alr0766 NP_484812.1 ORF_ID:all0769 NP_484814.1 ORF_ID:all0771 NP_484817.1 ORF_ID:alr0774 NP_484818.1 ORF_ID:all0775 NP_484821.1 similar to serine protease inhibitor NP_484825.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate NP_484827.1 ORF_ID:alr0784 NP_484831.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate NP_484832.1 ORF_ID:alr0789 NP_484834.1 ORF_ID:alr0791 NP_484840.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis NP_484843.1 ORF_ID:all0800 NP_484844.1 PsbW; part of the phosystem II reaction center NP_484850.1 ABC transporter, ATP-binding subunit, devA homolog NP_484851.1 ABC transporter, membrane spanning subunit, devC homolog NP_484852.1 ABC transporter, membrane fusion protein, devB homolog NP_484853.1 ORF_ID:alr0810 NP_484856.1 ORF_ID:all0813 NP_484862.1 invertase NP_484863.1 ORF_ID:alr0820 NP_484866.1 ORF_ID:all0823 NP_484867.1 ORF_ID:all0824 NP_484868.1 ORF_ID:all0825 NP_484870.1 oxidoreductase NP_484873.1 ORF_ID:all0830 NP_484874.1 transcriptional regulator, smtB homolog NP_484875.1 ORF_ID:all0832 NP_484876.1 ORF_ID:all0833 NP_484877.1 ORF_ID:alr0834 NP_484886.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA NP_484887.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation NP_484888.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes NP_484889.1 may be involved in regulating PSII assembly and/or stability NP_484890.1 ORF_ID:asr0847 NP_484891.1 alpha-mannosidase NP_484893.1 acyltransferase NP_484894.1 ORF_ID:alr0851 NP_484896.1 ORF_ID:all0853 NP_484902.2 Transfers the fatty acyl group on membrane lipoproteins NP_484903.1 negatively supercoils closed circular double-stranded DNA NP_484905.1 transcriptional regulator, rbcR homolog NP_484906.1 ORF_ID:all0863 NP_484907.1 ORF_ID:all0864 NP_484908.1 ORF_ID:all0865 NP_484909.1 ORF_ID:all0866 NP_484910.1 ORF_ID:all0867 NP_484911.1 ORF_ID:all0868 NP_484912.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_484913.1 catalyzes the transfer of electrons from NADH to ubiquinone; NdhD4 is possibly involved in a constitutive CO(2)-uptake system NP_484916.1 ORF_ID:asl0873 NP_484917.1 nitrogenase iron protein; nitrogenase component 2; with component 1, a molybdenum/vanadium-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; Anabaena contains both a molybdenum-dependent and a vanadium-dependent nitrogenase complex NP_484918.1 probable alpha-glucanotransferase NP_484920.1 probable acylphosphatase; catalyzes the hydrolysis of acylphosphate NP_484921.1 probable acetyltransferase NP_484922.1 ORF_ID:all0879 NP_484923.1 ORF_ID:alr0880 NP_484926.1 ORF_ID:asl0883 NP_484927.1 probable ferredoxin [2Fe-2S] NP_484928.1 may be involved in binding plastoquinone and maintaining PSII dimers NP_484929.1 ORF_ID:all0886 NP_484931.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway NP_484938.1 ORF_ID:alr0895 NP_484940.1 ORF_ID:alr0897 NP_484943.1 ORF_ID:alr0900 NP_484946.1 thiosulfate sulfurtransferase NP_484950.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation NP_484951.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation NP_484952.1 ORF_ID:all0909 NP_484953.1 ORF_ID:all0910 NP_484954.1 ORF_ID:all0911 NP_484955.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome NP_484956.1 ORF_ID:alr0913 NP_484957.1 probable glycosyl transferase NP_484958.1 probable glycosyl transferase NP_484959.1 ORF_ID:all0916 NP_484960.1 ORF_ID:all0917 NP_484962.1 probable glycosyltransferase NP_484969.1 ORF_ID:all0926 NP_484970.1 ORF_ID:all0927 NP_484971.1 ORF_ID:all0928 NP_484972.1 ORF_ID:all0929 NP_484973.1 ORF_ID:all0930 NP_484975.1 tRNA(Ile)-lysidine synthase NP_484976.1 ORF_ID:alr0933 NP_484977.1 ORF_ID:all0934 NP_484979.1 ORF_ID:all0936 NP_484982.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_484984.1 ORF_ID:asr0941 NP_484988.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase NP_484991.1 converts protoheme IX and farnesyl diphosphate to heme O NP_484993.1 ORF_ID:alr0950 NP_484994.1 ORF_ID:alr0951 NP_484995.1 ORF_ID:alr0952 NP_484997.1 similar to potassium channel protein NP_485000.1 ORF_ID:alr0957 NP_485003.1 ORF_ID:alr0960 NP_485004.1 MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis NP_485011.1 ORF_ID:all0968 NP_485013.1 ORF_ID:alr0970 NP_485015.1 ORF_ID:alr0972 NP_485016.1 ORF_ID:alr0973 NP_485017.1 ORF_ID:alr0974 NP_485018.1 similar to phytochelatin synthase NP_485021.1 ORF_ID:all0978 NP_485023.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli NP_485025.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine NP_485026.1 metalloprotease NP_485028.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway NP_485031.1 ORF_ID:all0988 NP_485032.1 Catalyzes a step in the de novo purine nucleotide biosynthetic pathway NP_485033.1 ORF_ID:alr0990 NP_485034.1 ORF_ID:alr0991 NP_485035.1 ORF_ID:alr0992 NP_485039.1 ORF_ID:alr0996 NP_485041.1 catalase NP_485042.1 ORF_ID:alr0999 NP_485043.1 probable glycosyl transferase NP_485047.1 ORF_ID:alr1004 NP_485054.1 ORF_ID:all1011 NP_485055.1 ORF_ID:all1012 NP_485061.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia NP_485062.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential NP_485064.1 probable proteinase NP_485067.1 ORF_ID:alr1024 NP_485068.1 component of photosystem II; manganese-binding polypeptide with arginine metablolizing activity NP_485069.1 ORF_ID:alr1026 NP_485070.1 ORF_ID:all1027 NP_485074.1 ORF_ID:alr1031 NP_485075.1 acetyltransferase NP_485078.1 ORF_ID:all1035 NP_485082.1 probable aspartate aminotransferase; catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate NP_485084.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese NP_485085.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins NP_485087.1 ORF_ID:alr1044 NP_485089.1 ORF_ID:all1046 NP_485090.1 ORF_ID:all1047 NP_485093.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family NP_485094.1 ORF_ID:all1051 NP_485096.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_485097.1 main replicative polymerase NP_485102.1 ORF_ID:all1059 NP_485104.1 probable formate dehydrogenase NP_485105.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress NP_485110.1 protein-tyrosine-phosphatase NP_485111.1 ORF_ID:all1068 NP_485112.1 ORF_ID:all1069 NP_485113.1 ORF_ID:all1070 NP_485114.1 ORF_ID:all1071 NP_485115.1 ORF_ID:all1072 NP_485116.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme NP_485118.1 ORF_ID:all1075 NP_485120.1 probable carboxymethylenebutenolidase NP_485121.1 ORF_ID:alr1078 NP_485122.1 probable potassium channel protein NP_485123.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine NP_485129.1 ORF_ID:alr1086 NP_485130.1 ORF_ID:all1087 NP_485131.1 ORF_ID:all1088 NP_485134.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown NP_485135.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA NP_485137.1 ORF_ID:alr1094 NP_485138.1 ORF_ID:alr1095 NP_485139.1 ORF_ID:alr1096 NP_485140.1 ORF_ID:alr1097 NP_485142.1 ORF_ID:all1099 NP_485143.1 ORF_ID:all1100 NP_485144.1 ORF_ID:all1101 NP_485146.1 ORF_ID:all1103 NP_485148.1 ORF_ID:alr1105 NP_485149.1 similar to neoxanthin cleavage enzyme NP_485150.1 ORF_ID:alr1107 NP_485153.1 ORF_ID:all1110 NP_485155.1 probable transglycosylase NP_485156.1 ORF_ID:alr1113 NP_485161.1 ORF_ID:all1118 NP_485164.1 ORF_ID:alr1121 NP_485167.1 probable glutathione S-transferase NP_485169.1 ORF_ID:all1126 NP_485170.1 ORF_ID:all1127 NP_485171.1 ORF_ID:alr1128 NP_485175.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion NP_485183.1 similar to N-acetylmuramoyl-L-alanine amidase NP_485184.1 catalyzes the formation of tyrosine from arogenate NP_485188.1 ORF_ID:all1145 NP_485195.1 ORF_ID:alr1152 NP_485196.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate NP_485198.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers NP_485200.1 ORF_ID:alr1157 NP_485202.1 ORF_ID:alr1159 NP_485204.1 probable hydrolase NP_485205.1 NADPH-dependent 7-cyano-7-deazaguanine reductase; NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis NP_485210.1 ORF_ID:alr1167 NP_485212.1 ORF_ID:all1169 NP_485213.1 ORF_ID:alr1170 NP_485214.1 ORF_ID:alr1171 NP_485216.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage NP_485217.1 ORF_ID:alr1174 NP_485220.1 ORF_ID:all1177 NP_485221.1 ORF_ID:all1178 NP_485231.1 oxidoreductase NP_485234.1 ORF_ID:all1191 NP_485235.1 ORF_ID:alr1192 NP_485237.1 ORF_ID:alr1194 NP_485244.1 ORF_ID:alr1201 NP_485250.1 Catalyzes the phosphorylation of UMP to UDP NP_485251.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs NP_485255.1 ORF_ID:alr1212 NP_485257.1 probable undecaprenol kinase; BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell NP_485259.1 stabilizes and protects the oxygen-evolving complex of photosystem II against heat-induced inactivation NP_485260.1 catalyzes the formation of oxaloacetate from L-aspartate NP_485264.1 ORF_ID:all1221 NP_485266.1 ORF_ID:alr1223 NP_485272.1 ORF_ID:alr1229 NP_485273.1 ORF_ID:alr1230 NP_485274.1 ORF_ID:alr1231 NP_485278.1 probable amidase NP_485281.1 ORF_ID:alr1238 NP_485283.1 ORF_ID:alr1240 NP_485284.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate NP_485287.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis NP_485288.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate NP_485291.1 ORF_ID:all1248 NP_485297.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair NP_485301.1 ORF_ID:all1258 NP_485304.1 ORF_ID:alr1261 NP_485306.1 UV-endonuclease NP_485307.1 ORF_ID:alr1264 NP_485310.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate NP_485312.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_485313.1 ORF_ID:alr1270 NP_485315.1 probable glycogen phosphorylase NP_485319.1 acetyl transferase NP_485320.1 4.8-kDa protein; may be involved in assembling and stabilizing of PSII dimers NP_485322.1 ORF_ID:all1279 NP_485323.1 ORF_ID:all1280 NP_485324.1 ORF_ID:all1281 NP_485325.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group NP_485326.1 ORF_ID:asr1283 NP_485327.1 ORF_ID:all1284 NP_485328.1 ORF_ID:alr1285 NP_485333.1 ORF_ID:all1290 NP_485334.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide NP_485336.1 similar to ABC transporter NP_485337.1 similar to ABC transporter NP_485338.1 prohibitin homolog NP_485340.1 ORF_ID:alr1297 NP_485342.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis NP_485345.1 ORF_ID:alr1302 NP_485346.1 ORF_ID:all1303 NP_485347.1 ORF_ID:all1304 NP_485351.1 ORF_ID:alr1308 NP_485352.1 NifU like protein NP_485354.1 ORF_ID:alr1311 NP_485355.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) NP_485356.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis NP_485358.1 ORF_ID:alr1315 NP_485361.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain NP_485362.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate NP_485366.1 synthesizes RNA primers at the replication forks NP_485368.1 ORF_ID:all1325 NP_485375.1 ORF_ID:alr1332 NP_485377.1 ORF_ID:alr1334 NP_485379.1 ORF_ID:alr1336 NP_485380.1 probable ribosylglycoyhdrolase NP_485386.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate NP_485388.1 probable glycosyl transferase NP_485391.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide NP_485392.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase NP_485396.1 hydrolase NP_485400.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis NP_485401.1 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1; oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis NP_485402.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs NP_485404.1 similar to cytochrome P450 NP_485405.1 carboxymethylenebutenolidase NP_485408.1 ORF_ID:all1365 NP_485409.1 cytochrome b6-f complex subunit 5; plastohydroquinone/plastocyanin oxidoreductase; with PetL, PetM and PetN makes up the small subunit of the cytochrome b6-f complex; cytochrome b6-f mediates electron transfer between photosystem II and photosystem I NP_485411.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide NP_485414.1 ORF_ID:all1371 NP_485424.1 ORF_ID:alr1381 NP_485425.1 ORF_ID:alr1382 NP_485426.1 ORF_ID:alr1383 NP_485427.1 ORF_ID:alr1384 NP_485431.1 ORF_ID:all1388 NP_485432.1 ORF_ID:all1389 NP_485439.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_485447.1 ORF_ID:alr1404 NP_485450.1 in Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis NP_485451.1 ORF_ID:asr1408 NP_485452.1 ORF_ID:asr1409 NP_485457.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine NP_485459.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D NP_485460.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate NP_485461.1 probable short-chain dehydrogenase NP_485462.1 probable methyltransferase NP_485463.1 probable short chain dehydrogenase NP_485464.1 transcriptional regulator NP_485466.1 ORF_ID:alr1423 NP_485471.1 ORF_ID:asr1428 NP_485473.1 ORF_ID:all1430 NP_485474.1 ORF_ID:all1431 NP_485475.1 ORF_ID:all1432 NP_485476.1 associates with NifD and may protect the nitrogenase Fe-Mo protein from oxidative damage NP_485479.1 ORF_ID:all1436 NP_485480.1 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe NP_485481.1 ORF_ID:all1438 NP_485483.1 ORF_ID:all1440 NP_485484.1 ORF_ID:all1454 NP_485485.1 ORF_ID:alr1442 NP_485493.1 ORF_ID:alr1450 NP_485496.1 ORF_ID:asr1453 NP_485497.1 nitrogenase iron protein; nitrogenase component 2; with component 1, a molybdenum/vanadium-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; Anabaena contains both a molybdenum-dependent and a vanadium-dependent nitrogenase complex NP_485498.1 ORF_ID:all1456 NP_485499.1 ORF_ID:all1457 NP_485500.1 ORF_ID:alr1459 NP_485502.1 ORF_ID:alr1461 NP_485503.1 ORF_ID:alr1462 NP_485507.1 ORF_ID:all1466 NP_485524.1 Probable phosphoketolase 1 NP_485529.1 ORF_ID:all1488 NP_485531.1 ORF_ID:alr1490 NP_485532.1 probable ABC transporter permease NP_485536.1 ORF_ID:all1495 NP_485548.1 ORF_ID:alr1507 NP_485553.1 Rieske protein, with cytochrome b6, cytochrome f, and subunit IV, makes up the large subunit of the cytochrome b6-f complex; cytochrome b6-f mediates electron transfer between photosystem II and photosystem I NP_485556.1 probable cation-transporting ATPase NP_485557.1 ORF_ID:all1517 NP_485559.1 ORF_ID:alr1519 NP_485561.1 invertase NP_485562.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate NP_485564.1 type III RuBisCO; involved in carbon fixation NP_485566.1 ORF_ID:alr1526 NP_485568.1 ORF_ID:alr1528 NP_485571.1 ORF_ID:alr1531 NP_485573.1 ORF_ID:alr1533 NP_485580.1 similar to penicillin-resistant DD-carboxypeptidase NP_485581.1 ORF_ID:all1541 NP_485583.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs NP_485585.1 ORF_ID:alr1545 NP_485587.1 ORF_ID:all1547 NP_485589.1 ORF_ID:all1549 NP_485591.1 ORF_ID:alr1551 NP_485592.1 ORF_ID:alr1552 NP_485593.1 ORF_ID:all1553 NP_485594.1 ORF_ID:alr1554 NP_485596.1 ORF_ID:alr1556 NP_485609.1 ORF_ID:alr1569 NP_485610.1 ORF_ID:asr1570 NP_485616.1 ORF_ID:alr1576 NP_485620.1 similar to myo-inositol catabolism iolE NP_485625.1 probable peroxidase NP_485626.1 probable glucodextranase NP_485628.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers NP_485631.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer NP_485632.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase NP_485634.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme NP_485635.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates NP_485636.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter NP_485637.1 ORF_ID:all1597 NP_485638.1 ORF_ID:all1598 NP_485639.1 ORF_ID:all1599 NP_485640.1 similar to aluminum resistance protein NP_485642.1 catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone NP_485643.1 heterocyst to vegetative cell connection protein (fraH) NP_485645.1 similar to sporulation protein SpoIID NP_485648.1 ORF_ID:all1608 NP_485649.1 ORF_ID:alr1609 NP_485654.1 ORF_ID:alr1614 NP_485655.1 ORF_ID:alr1615 NP_485659.1 ORF_ID:alr1619 NP_485660.1 ORF_ID:alr1620 NP_485663.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine NP_485665.1 ORF_ID:all1625 NP_485667.1 ORF_ID:alr1627 NP_485669.1 ORF_ID:alr1629 NP_485673.1 ORF_ID:alr1633 NP_485675.1 ORF_ID:alr1635 NP_485676.1 ORF_ID:all1636 NP_485678.1 ORF_ID:all1638 NP_485679.1 ORF_ID:all1639 NP_485680.1 ORF_ID:all1640 NP_485686.1 ORF_ID:all1646 NP_485687.1 ORF_ID:all1647 NP_485688.1 similar to polyketide synthase NP_485689.1 similar to polyketide synthase NP_485690.1 similar to polyketide synthase NP_485691.1 ORF_ID:all1651 NP_485696.1 probable RND efflux transporter NP_485697.1 ORF_ID:asl1657 NP_485703.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate NP_485705.1 ORF_ID:alr1665 NP_485706.1 probable D-alanyl-D-alanine carboxypeptidase NP_485708.1 glycosyl transferase NP_485709.1 similar to chitooligosaccharide deacetylase NodB NP_485710.1 ORF_ID:all1670 NP_485713.1 similar to heme binding protein CemA; involved in light-induced Na+-dependent proton extrusion NP_485715.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress NP_485718.1 ORF_ID:all1678 NP_485720.1 similar to two-component sensor histidine kinase NP_485721.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis NP_485722.1 probable Mg2+ transport protein NP_485723.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate NP_485725.1 ORF_ID:alr1685 NP_485726.1 purple acid phosphatase precursor NP_485728.1 ORF_ID:all1688 NP_485729.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism NP_485730.1 ORF_ID:alr1690 NP_485731.1 ORF_ID:all1691 NP_485732.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; the proteins in this cluster is involved expression of genes important stationary phase, nitrogen promoter recognition, and light/dark adaption NP_485733.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate NP_485734.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group NP_485735.1 probable peptide synthetase NP_485736.1 similar to fibrinogen-binding protein NP_485737.1 probable ribonuclease D NP_485742.1 ORF_ID:all1702 NP_485743.1 ORF_ID:all1703 NP_485744.1 ORF_ID:all1704 NP_485745.1 ORF_ID:alr1705 NP_485746.1 ORF_ID:alr1706 NP_485756.1 ORF_ID:all1716 NP_485757.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB NP_485761.1 ORF_ID:alr1721 NP_485762.1 probable oxidoreductase NP_485763.1 probable aldolase NP_485766.1 ORF_ID:alr1726 NP_485767.1 ORF_ID:alr1727 NP_485770.1 similar to HetF protein NP_485776.1 ORF_ID:all1736 NP_485777.1 probable glycosyl transferase NP_485778.1 ORF_ID:all1738 NP_485781.1 probable proteinase NP_485782.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria NP_485783.1 Converts chlorophyllide a into protochlorophyllide; light dependent NP_485784.1 ORF_ID:alr1744 NP_485785.1 ORF_ID:all1745 NP_485788.1 lipoprotein NP_485790.1 similar to WD-repeat containing protein NP_485794.1 Dephospho-CoA kinase; catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis NP_485797.1 ORF_ID:all1757 NP_485799.1 ORF_ID:all1759 NP_485800.1 Regulates rRNA biosynthesis by transcriptional antitermination NP_485802.1 glycosyltransferase NP_485806.1 probable glycosyl transferase NP_485807.1 probable glycosyl transferase NP_485808.1 probable glycosyl transferase NP_485813.1 ORF_ID:asl1773 NP_485814.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides NP_485819.1 similar to cyanophycin synthetase NP_485820.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6 NP_485824.1 ORF_ID:all1784 NP_485826.1 ORF_ID:alr1786 NP_485828.1 similar to zeta-carotene desaturase; unknown protein NP_485833.1 oligosaccharide deacetylase NP_485838.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step NP_485839.1 similar to O-linked GlcNAc transferase NP_485842.1 probable Na+-transporting ATP synthase NP_485843.1 ORF_ID:alr1803 NP_485844.1 ORF_ID:all1804 NP_485849.1 ORF_ID:alr1809 NP_485851.1 ORF_ID:all1811 NP_485863.1 ORF_ID:all1823 NP_485867.1 Converts isocitrate to alpha ketoglutarate NP_485871.1 sugar hydrolase NP_485872.1 ORF_ID:alr1832 NP_485873.1 ORF_ID:alr1833 NP_485874.1 probable periplasmic branched chain amino acid binding protein NP_485877.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali NP_485882.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone NP_485883.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali NP_485885.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine NP_485886.1 ORF_ID:all1846 NP_485887.1 similar to protein-glutamate methylesterase NP_485888.1 similar to methyltransferase NP_485893.1 ORF_ID:alr1853 NP_485894.1 ORF_ID:alr1854 NP_485898.1 ORF_ID:alr1858 NP_485899.1 ORF_ID:alr1859 NP_485902.1 similar to peptidase NP_485903.1 ORF_ID:all1863 NP_485904.1 similar to NADH dehydrogenase NP_485905.1 similar to xenobiotic reductase NP_485906.1 ORF_ID:all1866 NP_485907.1 ORF_ID:alr1867 NP_485909.1 ORF_ID:alr1869 NP_485916.1 similar to YegS from E. coli NP_485918.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis NP_485919.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose NP_485920.1 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2; oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis NP_485923.1 ORF_ID:alr1883 NP_485924.1 probable short-chain dehydrogenase NP_485925.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) NP_485930.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate NP_485931.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype NP_485933.1 ORF_ID:all1893 NP_485934.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_485935.1 probable glycosyl transferase NP_485936.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth NP_485937.1 ORF_ID:all1897 NP_485940.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate NP_485941.1 catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester NP_485944.1 ORF_ID:all1904 NP_485951.1 ORF_ID:alr1911 NP_485952.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors NP_485953.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis NP_485954.1 similar to two-component sensor histidine kinase NP_485956.1 ORF_ID:all1916 NP_485959.1 ORF_ID:all1919 NP_485961.1 ORF_ID:alr1921 NP_485962.1 Cytochrome b6-f complex subunit 6 (Cytochrome b6-f complex subunit VI) (Cytochrome b6-f complex subunit petL); Ycf7; cytochrome b6-f complex subunit 6; with PetG, PetM and PetN makes up the small subunit of the cytochrome b6-f complex; cytochrome b6-f mediates electron transfer between photosystem II and photosystem I NP_485964.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis NP_485967.1 ORF_ID:alr1927 NP_485968.1 similar to chromosomal hemolysin D NP_485970.1 similar to HepP protein, formation of heterocysts NP_485979.1 ORF_ID:all1939 NP_485980.1 ORF_ID:all1940 NP_485981.1 ORF_ID:alr1941 NP_485986.1 ORF_ID:alr1946 NP_485987.1 ORF_ID:all1947 NP_485988.1 ORF_ID:all1948 NP_485989.1 ORF_ID:all1949 NP_485990.1 ORF_ID:all1950 NP_485991.1 ORF_ID:all1951 NP_485992.1 ORF_ID:alr1952 NP_485993.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity NP_485995.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA NP_485996.1 ORF_ID:alr1956 NP_486003.1 ORF_ID:alr1963 NP_486004.1 ORF_ID:all1964 NP_486005.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ NP_486006.1 ORF_ID:alr1966 NP_486007.1 ORF_ID:alr1967 NP_486008.1 ORF_ID:alr1968 NP_486011.1 ORF_ID:all1971 NP_486012.1 ORF_ID:all1972 NP_486016.1 ORF_ID:alr1976 NP_486018.1 ORF_ID:alr1978 NP_486022.1 sugar kinase NP_486023.1 ORF_ID:all1983 NP_486025.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_486026.1 ORF_ID:all1986 NP_486029.1 ORF_ID:all1989 NP_486030.1 ORF_ID:all1990 NP_486032.1 ORF_ID:asl1992 NP_486041.1 nitrilase homolog NP_486044.1 ORF_ID:all2004 NP_486047.1 ORF_ID:all2007 NP_486048.1 ORF_ID:all2008 NP_486049.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. NP_486050.1 binds the polymerase to DNA and acts as a sliding clamp NP_486051.1 ORF_ID:all2011 NP_486052.1 ORF_ID:all2012 NP_486053.1 probable methyltransferase NP_486060.1 ORF_ID:all2020 NP_486061.1 ORF_ID:all2021 NP_486065.1 similar to MrsD protein NP_486066.1 similar to nitrile hydratase NP_486067.1 similar to nitrile hydratase NP_486069.1 ORF_ID:all2029 NP_486073.1 ORF_ID:all2033 NP_486075.1 ORF_ID:all2035 NP_486077.1 probable galactosyltransferase NP_486085.1 thioesterase NP_486086.1 potassium/proton antiporter NP_486088.2 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate NP_486089.1 ORF_ID:alr2049 NP_486091.1 ORF_ID:alr2051 NP_486094.1 ORF_ID:alr2054 NP_486097.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate NP_486103.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate NP_486105.1 ORF_ID:all2065 NP_486106.1 ORF_ID:all2066 NP_486107.1 ORF_ID:all2067 NP_486112.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine NP_486113.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate NP_486119.1 similar to chloride channel NP_486122.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group NP_486123.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity NP_486127.1 ORF_ID:alr2087 NP_486131.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide NP_486132.1 ORF_ID:alr2092 NP_486134.1 ORF_ID:all2094 NP_486135.1 ORF_ID:all2095 NP_486136.1 ORF_ID:all2096 NP_486137.1 ORF_ID:all2097 NP_486142.1 ORF_ID:all2102 NP_486144.1 probable methyltransferase NP_486145.1 ORF_ID:all2105 NP_486153.1 ORF_ID:all2113 NP_486158.1 ORF_ID:alr2118 NP_486159.1 ORF_ID:alr2119 NP_486161.1 probable delta(24)-sterol C-methyltransferase NP_486163.1 ORF_ID:alr2123 NP_486164.1 ORF_ID:all2124 NP_486177.1 ORF_ID:alr2137 NP_486178.1 ORF_ID:alr2138 NP_486182.1 ORF_ID:alr2142 NP_486185.1 ORF_ID:all2145 NP_486186.1 ORF_ID:all2146 NP_486187.1 ORF_ID:all2147 NP_486188.1 ORF_ID:all2148 NP_486189.1 ORF_ID:all2149 NP_486192.1 ORF_ID:all2152 NP_486193.1 ORF_ID:alr2153 NP_486194.1 ORF_ID:alr2154 NP_486197.1 ORF_ID:all2157 NP_486198.1 ORF_ID:all2158 NP_486199.1 ORF_ID:all2159 NP_486201.1 ORF_ID:all2161 NP_486202.1 ORF_ID:all2162 NP_486204.1 ORF_ID:all2164 NP_486205.1 ORF_ID:all2165 NP_486206.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway NP_486207.1 ORF_ID:all2167 NP_486208.1 ORF_ID:alr2168 NP_486209.1 similar to DD-carboxypeptidase NP_486214.1 ORF_ID:alr2174 NP_486215.1 ORF_ID:alr2175 NP_486216.1 ORF_ID:alr2176 NP_486218.1 ORF_ID:alr2178 NP_486219.1 ORF_ID:alr2179 NP_486224.1 ORF_ID:alr2184 NP_486225.1 ORF_ID:alr2185 NP_486226.1 ORF_ID:alr2186 NP_486228.1 similar to macrolide-efflux pump NP_486229.1 ORF_ID:alr2189 NP_486230.1 converts 1,4-alpha-D-glucans to maltodextrin NP_486233.1 probable sigma factor; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription NP_486244.1 ORF_ID:alr2204 NP_486245.1 ORF_ID:alr2205 NP_486248.1 ORF_ID:alr2208 NP_486249.1 ORF_ID:alr2209 NP_486250.1 ORF_ID:alr2210 NP_486251.1 ORF_ID:alr2211 NP_486252.1 ORF_ID:alr2212 NP_486253.1 ORF_ID:alr2213 NP_486255.1 similar to macrolide efflux protein NP_486256.1 ORF_ID:all2216 NP_486257.1 ORF_ID:all2217 NP_486258.1 ORF_ID:all2218 NP_486259.1 ORF_ID:all2219 NP_486261.1 ORF_ID:all2221 NP_486262.1 ORF_ID:all2222 NP_486263.1 acetyltransferase NP_486264.1 ORF_ID:all2224 NP_486265.1 ORF_ID:all2225 NP_486266.1 ORF_ID:alr2226 NP_486267.1 ORF_ID:all2227 NP_486268.1 ORF_ID:all2228 NP_486269.1 ORF_ID:all2229 NP_486270.1 ORF_ID:all2230 NP_486274.1 ORF_ID:alr2234 NP_486275.1 ORF_ID:all2235 NP_486276.1 ORF_ID:all2236 NP_486277.1 ORF_ID:all2237 NP_486279.1 ORF_ID:all2239 NP_486280.1 ORF_ID:alr2240 NP_486281.1 ORF_ID:alr2241 NP_486283.1 cell division control protein CDC48 homolog NP_486284.1 similar to arsenical pump-driving ATPase NP_486287.1 ORF_ID:all2247 NP_486288.1 ORF_ID:all2248 NP_486289.1 ORF_ID:all2249 NP_486290.1 ORF_ID:all2250 NP_486291.1 ORF_ID:all2251 NP_486292.1 ORF_ID:all2252 NP_486293.1 involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins NP_486294.1 involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins NP_486298.1 ORF_ID:alr2258 NP_486299.1 ORF_ID:alr2259 NP_486303.1 ORF_ID:all2263 NP_486304.1 ORF_ID:alr2264 NP_486305.1 ORF_ID:alr2265 NP_486306.1 ORF_ID:alr2266 NP_486308.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase NP_486309.1 chloroplastic outer envelope membrane protein homolog NP_486310.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis NP_486311.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP NP_486312.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis NP_486314.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM NP_486316.1 ORF_ID:alr2276 NP_486318.1 similar to soluble guanylyl cyclase beta subunit NP_486319.1 ORF_ID:alr2279 NP_486320.1 ORF_ID:alr2280 NP_486321.1 ORF_ID:all2281 NP_486322.1 ORF_ID:all2282 NP_486323.1 ORF_ID:all2283 NP_486324.1 ORF_ID:all2284 NP_486325.1 ORF_ID:all2285 NP_486326.1 ORF_ID:all2286 NP_486327.1 ORF_ID:all2287 NP_486328.1 ORF_ID:all2288 NP_486329.1 ORF_ID:all2289 NP_486330.1 similar to polysaccharide biosynthesis export protein NP_486331.1 ORF_ID:all2291 NP_486332.1 probable glycosyltransferase NP_486334.1 similar to polysaccharide export outer membrane protein NP_486337.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity NP_486342.1 ORF_ID:all2302 NP_486343.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides NP_486344.1 ORF_ID:alr2304 NP_486346.1 ORF_ID:alr2306 NP_486347.1 ORF_ID:alr2307 NP_486350.1 similar to agmatinase; unknown protein NP_486351.1 ORF_ID:alr2311 NP_486355.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis NP_486356.1 ORF_ID:all2316 NP_486357.1 nuclease NP_486359.1 ORF_ID:all2319 NP_486361.1 ORF_ID:alr2321 NP_486362.1 ORF_ID:alr2322 NP_486363.1 molecular chaperone NP_486365.1 ORF_ID:alr2325 NP_486367.1 ORF_ID:all2327 NP_486368.1 ORF_ID:alr2328 NP_486374.1 ORF_ID:all2334 NP_486375.1 ORF_ID:alr2335 NP_486376.1 ORF_ID:alr2336 NP_486379.1 controls heterocyst differentiation; has protease DNA-binding activity NP_486380.1 catalyzes the formation of N-succinyl-2-L-amino-6-oxoheptanedioate and L-glutamate from N-succinyl-L-2,6-diaminoheptanedioate and 2-oxoglutarate NP_486381.1 ORF_ID:all2341 NP_486382.1 similar to chloroplast membrane-associated 30 kD protein NP_486383.1 similar to chloroplast membrane-associated 30 kD protein NP_486387.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA NP_486390.1 Catalyzes a reaction in which the CO2 acceptor molecule, RuBP, is generated via the phosphorylation of ribulose 5-phosphate with ATP NP_486391.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase NP_486392.1 ORF_ID:all2352 NP_486394.1 ORF_ID:asl2354 NP_486395.1 ORF_ID:alr2355 NP_486396.1 ORF_ID:all2356 NP_486397.1 ORF_ID:all2357 NP_486398.1 ORF_ID:all2358 NP_486401.1 ORF_ID:alr2361 NP_486402.1 ORF_ID:asl2362 NP_486404.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits NP_486407.1 ORF_ID:all2367 NP_486408.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits NP_486412.1 ORF_ID:alr2372 NP_486415.1 similar to bacterioferritin comigratory protein NP_486417.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation NP_486419.1 ORF_ID:all2379 NP_486422.1 ORF_ID:all2382 NP_486430.1 ORF_ID:all2390 NP_486431.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide NP_486432.1 ORF_ID:alr2392 NP_486438.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate NP_486445.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group NP_486451.1 ORF_ID:alr2411 NP_486452.1 ORF_ID:alr2412 NP_486458.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_486468.1 ORF_ID:alr2428 NP_486469.1 ORF_ID:alr2429 NP_486472.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway NP_486473.1 ORF_ID:alr2433 NP_486476.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes NP_486482.1 ORF_ID:all2442 NP_486483.1 ORF_ID:all2443 NP_486484.1 ORF_ID:all2444 NP_486485.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor NP_486486.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria NP_486487.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion NP_486489.1 Probable GTPase engC protein 1; EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity NP_486492.1 cytochrome f, with cytochrome b6, subunit IV, and the Rieske protein, makes up the large subunit of the cytochrome b6-f complex; cytochrome b6-f mediates electron transfer between photosystem II and photosystem I NP_486493.1 Rieske protein, with cytochrome b6, cytochrome f, and subunit IV, makes up the large subunit of the cytochrome b6-f complex; cytochrome b6-f mediates electron transfer between photosystem II and photosystem I NP_486495.1 ORF_ID:asl2455 NP_486498.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer NP_486509.1 ORF_ID:asl2469 NP_486513.1 ORF_ID:all2473 NP_486514.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway NP_486515.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis NP_486519.1 ORF_ID:alr2479 NP_486520.1 ORF_ID:all2480 NP_486521.1 ORF_ID:alr2481 NP_486522.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate NP_486523.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria NP_486525.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers NP_486526.1 ORF_ID:alr2486 NP_486532.1 probable ABC transporter membrane protein (ycf24); with SufCD activates cysteine desulfurase SufS NP_486533.1 ORF_ID:alr2493 NP_486535.1 probable aminotransferase NP_486537.1 ORF_ID:all2497 NP_486538.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis NP_486540.1 ORF_ID:all2500 NP_486541.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis NP_486542.1 ORF_ID:alr2502 NP_486543.1 ORF_ID:alr2503 NP_486545.1 aminotransferase NP_486546.1 similar to cyanophycinase NP_486547.1 probable hexosyltransferase NP_486548.1 binds to the ribosome on the universally-conserved alpha-sarcin loop NP_486549.1 similar to phosphoenolpyruvate synthase NP_486552.1 ORF_ID:all2512 NP_486553.1 ORF_ID:asr2513 NP_486554.1 ORF_ID:alr2514 NP_486555.1 ORF_ID:alr2515 NP_486556.1 ORF_ID:alr2516 NP_486561.1 ORF_ID:all2521 NP_486566.1 ORF_ID:alr2526 NP_486571.1 nitrogen fixation protein NifX homolog NP_486572.1 ORF_ID:alr2532 NP_486573.1 ORF_ID:all2533 NP_486575.1 ORF_ID:alr2535 NP_486576.1 ORF_ID:alr2536 NP_486578.1 ORF_ID:alr2538 NP_486579.1 ORF_ID:alr2539 NP_486581.1 ORF_ID:alr2541 NP_486582.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis NP_486584.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate NP_486591.1 ORF_ID:asl2551 NP_486596.1 ORF_ID:all2556 NP_486601.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA NP_486603.1 Maintains the balance of metabolites in the pentose-phosphate pathway NP_486604.1 ORF_ID:all2564 NP_486606.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate NP_486607.1 Probable phosphoketolase 2 NP_486608.1 Probable 2-phosphosulfolactate phosphatase; catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate NP_486612.1 ORF_ID:alr2572 NP_486615.1 ORF_ID:alr2575 NP_486618.1 ORF_ID:all2578 NP_486620.1 ORF_ID:all2580 NP_486621.1 similar to ferric aerobactin receptor NP_486623.1 ORF_ID:alr2583 NP_486624.1 ORF_ID:all2584 NP_486625.1 ORF_ID:all2585 NP_486626.1 ORF_ID:all2586 NP_486627.1 ORF_ID:alr2587 NP_486628.1 ORF_ID:alr2588 NP_486630.1 ORF_ID:alr2590 NP_486631.1 ORF_ID:alr2591 NP_486632.1 ORF_ID:alr2592 NP_486633.1 ORF_ID:alr2593 NP_486635.1 ORF_ID:alr2595 NP_486636.1 ORF_ID:alr2596 NP_486637.1 ORF_ID:alr2597 NP_486649.1 ORF_ID:all2609 NP_486650.1 ORF_ID:all2610 NP_486653.1 ORF_ID:all2613 NP_486658.1 ORF_ID:all2618 NP_486659.1 ORF_ID:all2619 NP_486660.1 ORF_ID:all2620 NP_486661.1 ORF_ID:all2621 NP_486662.1 ORF_ID:all2622 NP_486663.1 ORF_ID:all2623 NP_486665.1 ORF_ID:alr2625 NP_486666.1 ORF_ID:alr2626 NP_486667.1 ORF_ID:alr2627 NP_486670.1 required for 70S ribosome assembly NP_486671.1 ORF_ID:all2631 NP_486675.1 ORF_ID:all2635 NP_486678.1 ORF_ID:all2638 NP_486681.1 ORF_ID:all2641 NP_486682.1 ORF_ID:all2642 NP_486683.1 ORF_ID:all2643 NP_486684.1 ORF_ID:all2644 NP_486685.1 ORF_ID:all2645 NP_486686.1 ORF_ID:all2646 NP_486687.1 ORF_ID:all2647 NP_486688.1 ORF_ID:all2648 NP_486689.1 probable non-ribosomal peptide synthetase NP_486690.1 ORF_ID:all2650 NP_486691.1 ORF_ID:all2651 NP_486694.1 similar to S-layer-RTX protein NP_486696.1 ORF_ID:all2656 NP_486697.1 similar to thioesterase NP_486703.1 ORF_ID:alr2663 NP_486704.1 ORF_ID:all2664 NP_486712.1 ORF_ID:all2672 NP_486714.1 ORF_ID:all2674 NP_486715.1 similar to leukotoxin secretion protein NP_486716.1 ORF_ID:all2676 NP_486718.1 probable acyl-CoA synthase NP_486719.1 ORF_ID:alr2679 NP_486720.1 ORF_ID:alr2680 NP_486721.1 similar to indigoidine systhesis protein IdgB NP_486722.1 ORF_ID:alr2682 NP_486723.1 ORF_ID:alr2683 NP_486724.1 similar to restriction enzyme, restriction chain NP_486727.1 ORF_ID:all2687 NP_486728.1 ORF_ID:all2688 NP_486729.1 ORF_ID:all2689 NP_486732.1 ORF_ID:all2692 NP_486733.1 ORF_ID:all2693 NP_486734.1 ORF_ID:alr2694 NP_486738.1 ORF_ID:alr2698 NP_486739.1 ORF_ID:all2699 NP_486740.1 probable arsenical pump-driving ATPase NP_486748.1 ORF_ID:alr2708 NP_486758.1 probable cobyric acid synthase NP_486759.1 ORF_ID:alr2719 NP_486762.1 ORF_ID:alr2722 NP_486765.1 ORF_ID:alr2725 NP_486766.1 ORF_ID:alr2726 NP_486768.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision NP_486771.1 ORF_ID:alr2731 NP_486772.1 ORF_ID:alr2732 NP_486774.1 ORF_ID:alr2734 NP_486777.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination NP_486778.1 probable periplasmic phosphonate binding protein component NP_486779.1 ORF_ID:alr2739 NP_486782.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway NP_486783.1 ORF_ID:alr2743 NP_486784.1 ORF_ID:alr2744 NP_486787.1 similar to precorrin methylase NP_486798.1 ORF_ID:alr2758 NP_486800.1 ORF_ID:all2760 NP_486804.1 ORF_ID:alr2764 NP_486805.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate NP_486806.1 ORF_ID:alr2766 NP_486809.1 ORF_ID:alr2769 NP_486810.1 ORF_ID:all2770 NP_486811.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis NP_486812.1 ORF_ID:all2772 NP_486813.1 ORF_ID:alr2773 NP_486814.1 ORF_ID:alr2774 NP_486817.1 ORF_ID:all2777 NP_486820.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity NP_486822.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis NP_486825.1 probable phytoene dehydrogenase Rieske iron-sulfur component NP_486827.1 probable kinesin light chain NP_486831.1 ORF_ID:alr2791 NP_486837.1 ORF_ID:all2797 NP_486840.1 ORF_ID:alr2800 NP_486843.1 ORF_ID:alr2803 NP_486846.1 probable alpha-glucan phosphorylase NP_486848.1 ORF_ID:all2808 NP_486850.1 ORF_ID:all2810 NP_486851.2 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis NP_486852.1 probable 16S rRNA processing protein; Essential for efficient processing of 16S rRNA NP_486853.1 ORF_ID:all2813 NP_486857.1 ORF_ID:alr2817 NP_486858.1 ORF_ID:alr2818 NP_486861.1 ORF_ID:all2821 NP_486865.1 ORF_ID:alr2825 NP_486866.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate NP_486867.1 epimerase/dehydratase NP_486870.1 ORF_ID:alr2830 NP_486871.1 probable NAD(P)-dependent oxidoreductase NP_486872.1 glycosyltransferase NP_486874.1 similar to glycosyltransferase (hepC) NP_486875.1 ORF_ID:alr2835 NP_486876.1 ORF_ID:alr2836 NP_486877.1 ORF_ID:alr2837 NP_486879.1 ORF_ID:alr2839 NP_486880.1 ORF_ID:alr2840 NP_486883.1 ORF_ID:all2843 NP_486885.1 ORF_ID:all2845 NP_486886.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway NP_486887.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A NP_486893.1 ORF_ID:all2853 NP_486894.1 similar to exopolysaccharide production protein NP_486900.1 similar to N-acetylglucosaminyltransferase NP_486903.1 similar to sugar transferase NP_486904.1 probable glycosyl transferase NP_486906.1 ORF_ID:alr2866 NP_486907.1 glycosyltransferase NP_486914.1 ORF_ID:all2874 NP_486915.1 ORF_ID:all2875 NP_486917.1 ORF_ID:alr2877 NP_486918.1 ORF_ID:alr2878 NP_486919.1 ORF_ID:alr2879 NP_486920.1 ORF_ID:alr2880 NP_486921.1 similar to YegS from E. coli NP_486922.1 ORF_ID:alr2882 NP_486923.1 ORF_ID:all2883 NP_486924.1 ORF_ID:alr2884 NP_486925.1 Decreases the phosphorylation of KaiC, a component of the main circadian regulator in cyanobacteria NP_486926.1 acts as a promotor non-specific transcription repressor NP_486931.1 dehydrogenase NP_486934.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration NP_486935.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase NP_486937.1 ORF_ID:all2897 NP_486938.1 ORF_ID:all2898 NP_486939.1 ORF_ID:all2899 NP_486940.1 ORF_ID:all2900 NP_486942.1 similar to heterocyst formation protein HetP NP_486946.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase NP_486948.1 ORF_ID:all2908 NP_486950.1 ORF_ID:all2910 NP_486951.1 ORF_ID:all2911 NP_486952.1 ORF_ID:all2912 NP_486954.1 similar to ferredoxin NP_486955.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine NP_486956.1 similar to DnaJ protein NP_486957.1 ORF_ID:all2917 NP_486958.1 secreted nuclease NP_486959.1 ORF_ID:all2919 NP_486960.1 short chain oxidoreductase NP_486961.1 similar to tRNA-(MS[2]IO[6]A)-hydroxylase NP_486963.1 ORF_ID:asl2923 NP_486968.1 ORF_ID:all2928 NP_486969.1 ORF_ID:all2929 NP_486973.1 ORF_ID:alr2933 NP_486974.1 glutaminase NP_486975.1 RlpA-like protein. NP_486976.1 catalyzes the formation of pantothenate from pantoate and beta-alanine and the formation of cytidine diphosphate from cytidine monophosphate NP_486978.1 ORF_ID:alr2938 NP_486981.1 probable peptidoglycan binding protein NP_486985.1 OPRT; OPRTase; OMP decarboxylase; OMPDCase; OMPdecase; fusion of two genes involved in the fifth and sixth steps of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate and converts orotidine 5'phosphate to UMP and carbon dioxide NP_486988.1 zinc-binding oxidoreductase NP_486991.1 probable helicase NP_486992.1 ORF_ID:all2952 NP_486993.1 ORF_ID:asr2953 NP_486995.1 ORF_ID:all2955 NP_486996.1 ORF_ID:all2956 NP_487001.1 similar to reverse transcriptase NP_487002.1 ORF_ID:all2962 NP_487003.1 ORF_ID:all2963 NP_487004.1 probable NADH dehydrogenase NP_487006.1 similar to deoxyribodipyrimidine photolyase NP_487008.1 in Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis NP_487010.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol NP_487013.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate NP_487015.1 signal peptidase I NP_487021.1 ORF_ID:all2981 NP_487022.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) NP_487023.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase NP_487030.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria NP_487031.1 ORF_ID:alr2991 NP_487033.1 ORF_ID:alr2993 NP_487035.1 catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate NP_487037.1 ORF_ID:all2997 NP_487038.1 ORF_ID:alr2998 NP_487039.1 ORF_ID:alr2999 NP_487052.1 ORF_ID:alr3012 NP_487058.1 probable DNA polymerase, bacteriophage-type NP_487068.1 ORF_ID:all3028 NP_487070.1 similar to Ras family protein NP_487075.1 ORF_ID:all3035 NP_487077.1 ORF_ID:alr3037 NP_487082.1 ORF_ID:asr3042 NP_487083.1 ORF_ID:asr3043 NP_487090.2 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate NP_487095.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex NP_487096.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer NP_487097.1 probable glycosyl transferase NP_487098.1 probable glycosyl transferase NP_487099.1 similar to polysaccharide export protein NP_487101.1 similar to acetyltransferase NP_487102.1 probable glycosyl transferase NP_487103.1 probable glycosyl transferase NP_487104.1 probable glycosyl transferase NP_487105.1 plobable polysaccharide biosynthesis protein NP_487106.1 ORF_ID:alr3066 NP_487107.1 probable glycosyl transferase NP_487108.1 probable glycosyl transferase NP_487109.1 probable glycosyl transferase NP_487110.1 probable glycosyl transferase NP_487111.1 probable glycosyl transferase NP_487112.1 probable polysaccharide biosynthesis protein NP_487113.1 probable glycosyl transferase NP_487114.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis NP_487115.1 Maf-like protein all3075; Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell NP_487116.1 similar to photosystem II oxygen-evolving complex 23K protein PsbP NP_487119.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) NP_487122.1 similar to transposase NP_487125.1 Regulatory factor involved in maltose metabolism NP_487126.1 ORF_ID:alr3086 NP_487128.1 ORF_ID:alr3088 NP_487129.1 ORF_ID:asr3089 NP_487132.1 ORF_ID:alr3092 NP_487133.1 involved in de novo purine biosynthesis NP_487136.1 ORF_ID:alr3096 NP_487140.1 Holliday junction resolvase; similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function NP_487143.2 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis NP_487147.1 probable integrase; unknown protein NP_487151.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine NP_487153.1 ORF_ID:all3113 NP_487159.1 WD repeat protein with Ser/Thr protein kinase motif NP_487160.1 ORF_ID:alr3120 NP_487161.1 ORF_ID:alr3121 NP_487162.1 c-type cytochrome biogenesis protein CcdA NP_487163.1 ORF_ID:alr3123 NP_487164.1 similar to XisI protein NP_487165.1 ORF_ID:alr3125 NP_487166.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_487172.1 ORF_ID:all3132 NP_487175.1 ORF_ID:all3135 NP_487176.1 ORF_ID:all3136 NP_487179.1 5'-nucleotidase alr3139; catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate NP_487181.1 ORF_ID:all3141 NP_487183.1 ORF_ID:all3143 NP_487186.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_487187.1 ORF_ID:alr3147 NP_487191.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex NP_487192.1 ORF_ID:asl3152 NP_487193.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions NP_487194.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions NP_487195.1 ORF_ID:alr3155 NP_487196.1 ORF_ID:alr3156 NP_487197.1 ORF_ID:alr3157 NP_487198.1 ORF_ID:alr3158 NP_487199.1 ORF_ID:alr3159 NP_487201.1 ORF_ID:all3161 NP_487202.1 ORF_ID:alr3162 NP_487205.1 ORF_ID:alr3165 NP_487207.1 ORF_ID:all3167 NP_487208.1 Probable 30S ribosomal protein PSRP-3 (Ycf65-like protein). NP_487209.1 WD repeat protein with Ser/Thr protein protein kinase motif NP_487211.1 ORF_ID:all3171 NP_487214.1 catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP NP_487216.1 probable glycosyl transferase NP_487217.1 probable glycosyl transferase NP_487218.1 acetyl transferase; acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit) NP_487220.1 similar to adenylate cyclase NP_487222.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA NP_487223.1 ORF_ID:alr3183 NP_487224.1 ORF_ID:all3184 NP_487225.1 lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse; lipoate-protein ligase B; transfers lipoate to apolipoproteins; involved in lipoate metabolism NP_487227.1 ORF_ID:alr3187 NP_487228.1 similar to dinitrogenase reductase activating glycohydrolase NP_487229.1 ORF_ID:alr3189 NP_487230.1 similar to photosystem I subunit IX (psaJ) NP_487232.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain NP_487233.1 Photosystem I assembly protein ycf3. NP_487235.1 probable glutathione S-transferase NP_487241.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine NP_487242.1 ORF_ID:alr3202 NP_487245.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation NP_487246.1 ORF_ID:all3206 NP_487247.1 ORF_ID:all3207 NP_487250.1 ORF_ID:alr3210 NP_487251.1 ORF_ID:all3211 NP_487252.1 ORF_ID:asl3212 NP_487262.1 ORF_ID:alr3222 NP_487264.1 similar to site-specific recombinase (xisC) NP_487265.1 ORF_ID:alr3225 NP_487269.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin NP_487270.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis NP_487272.1 ORF_ID:all3232 NP_487273.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II NP_487274.1 similar to heterocyst formation protein HetP NP_487275.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water NP_487279.1 ORF_ID:all3239 NP_487280.1 ORF_ID:alr3240 NP_487281.1 ORF_ID:alr3241 NP_487282.1 ORF_ID:alr3242 NP_487283.1 ORF_ID:alr3243 NP_487284.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase NP_487285.1 ORF_ID:all3245 NP_487295.1 ORF_ID:all3255 NP_487300.1 ORF_ID:alr3260 NP_487303.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis NP_487305.2 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway NP_487308.1 ORF_ID:alr3268 NP_487311.1 probable polysaccharide polymerization protein NP_487312.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs NP_487314.1 ORF_ID:all3274 NP_487315.1 ORF_ID:all3275 NP_487316.1 probable peptidase NP_487320.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response NP_487323.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase NP_487324.1 ORF_ID:all3284 NP_487325.1 ORF_ID:alr3285 NP_487327.1 ORF_ID:alr3287 NP_487333.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine NP_487336.1 ORF_ID:alr3296 NP_487340.1 Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 3; oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis NP_487368.1 ORF_ID:all3328 NP_487369.1 ORF_ID:all3329 NP_487371.1 ORF_ID:alr3331 NP_487373.1 ORF_ID:all3333 NP_487374.1 ORF_ID:all3334 NP_487375.1 ORF_ID:all3335 NP_487376.1 similar to methionine adenosyltransferase NP_487378.1 ORF_ID:alr3338 NP_487379.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides NP_487380.1 Protein crcB homolog. NP_487381.1 ORF_ID:all3341 NP_487382.1 carries the fatty acid chain in fatty acid biosynthesis NP_487383.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP NP_487384.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_487387.1 similar to adenylate cyclase NP_487388.1 ORF_ID:all3348 NP_487390.1 ORF_ID:alr3350 NP_487392.1 probable rRNA methylase NP_487393.1 peptidase NP_487394.1 S-adenosyl-L-methionine-dependent methyltransferase mraW; Exhibits a S-adenosyl-dependent methyltransferase activity NP_487395.1 shuttles electrons from NAD(P)H, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradien NP_487396.1 similar to phytochrome NP_487398.1 ORF_ID:alr3358 NP_487399.1 ORF_ID:all3359 NP_487410.1 glycosyl transferase NP_487411.1 ORF_ID:all3371 NP_487412.1 ORF_ID:alr3372 NP_487414.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA NP_487415.1 ORF_ID:all3375 NP_487420.1 ORF_ID:alr3380 NP_487421.1 antibiotic efflux protein NP_487422.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis NP_487424.1 ORF_ID:alr3384 NP_487426.1 ORF_ID:alr3386 NP_487432.1 ORF_ID:all3392 NP_487433.1 similar to serum-resistance protein BrkB NP_487435.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide NP_487436.1 ORF_ID:all3396 NP_487437.1 ORF_ID:alr3397 NP_487440.1 ORF_ID:alr3400 NP_487441.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis NP_487442.1 ORF_ID:alr3402 NP_487446.1 similar to abortive phage resistance protein NP_487447.1 similar to abortive phage resistance protein NP_487448.1 ORF_ID:all3408 NP_487449.1 ORF_ID:asl3409 NP_487450.1 ORF_ID:all3410 NP_487452.1 in Escherichia coli transcription of this gene is enhanced by polyamines NP_487453.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates NP_487455.1 Inner membrane protein oxaA; functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria NP_487460.1 ORF_ID:all3420 NP_487461.1 electron transport protein NP_487462.1 PetD, with cytochrome b6, cytochrome F, and the Rieske protein, makes up the large subunit of the cytochrome b6-f complex; cytochrome b6-f mediates electron transfer between photosystem II and photosystem I NP_487463.1 similar to anti-sigma-B factor NP_487464.1 ORF_ID:alr3424 NP_487465.1 probable glycosyl transferase NP_487467.1 ORF_ID:asr3427 NP_487468.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit NP_487469.1 ORF_ID:alr3429 NP_487471.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine NP_487472.1 catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate NP_487481.1 light-independent reduction of protochlorophyllide to form chlorophyllide a NP_487482.1 ORF_ID:alr3442 NP_487483.1 ORF_ID:alr3443 NP_487484.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA NP_487488.1 phytyltransferase acting specifically in the tocopherol biosynthetic pathway; member of the UbiA prenyltransferase which catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin NP_487490.1 ORF_ID:alr3450 NP_487491.1 ORF_ID:alr3451 NP_487495.2 blocks the formation of polar Z-ring septums NP_487496.1 ORF_ID:alr3456 NP_487497.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell NP_487500.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth NP_487503.1 part of the core of the reaction center of photosystem I NP_487504.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source NP_487506.1 ORF_ID:alr3466 NP_487513.1 ORF_ID:alr3473 NP_487515.1 ORF_ID:alr3475 NP_487516.1 ORF_ID:alr3476 NP_487517.1 ORF_ID:alr3477 NP_487519.1 similar to nitrogen regulation protein NtrR NP_487543.1 probable integrase NP_487546.1 catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate NP_487549.1 ORF_ID:all3509 NP_487550.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis NP_487551.1 ORF_ID:alr3511 NP_487552.1 ORF_ID:alr3512 NP_487559.1 ORF_ID:all3519 NP_487561.1 probable hydrogenase component NP_487562.1 catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA NP_487565.1 ORF_ID:alr3525 NP_487567.1 similar to ubiquinone/menaquinone biosynthesis methyltransferase NP_487568.1 beta-phosphoglucomutase NP_487572.1 ORF_ID:all3532 NP_487574.1 probable potassium efflux transporter NP_487576.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; note this protein has an additional C-terminal tail of unknown function as compared to similar bifunctional enzymes NP_487577.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate NP_487578.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis NP_487580.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine NP_487583.1 ORF_ID:alr3543 NP_487586.1 ORF_ID:alr3546 NP_487587.1 ORF_ID:alr3547 NP_487589.1 similar to phycoerythrobilin lyase subunit (cpeF) NP_487590.1 similar to spore cortex-lytic enzyme prepeptide NP_487592.1 ORF_ID:all3552 NP_487593.1 UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin NP_487595.1 catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis NP_487596.1 ORF_ID:all3556 NP_487597.1 ORF_ID:all3557 NP_487598.1 ORF_ID:all3558 NP_487601.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs NP_487603.1 ORF_ID:all3563 NP_487604.1 similar to two-component sensor histidine kinase NP_487606.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway NP_487607.1 probable Na+/H+-exchanging protein NP_487609.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) NP_487610.1 catalyzes the hydrolysis of pyrophosphate NP_487611.1 ORF_ID:alr3571 NP_487612.1 ORF_ID:all3572 NP_487613.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis along with cofH NP_487614.1 ORF_ID:all3574 NP_487615.1 ORF_ID:all3575 NP_487616.1 ORF_ID:alr3576 NP_487618.1 main replicative polymerase; these cyanobacterial enzymes contain C-terminal split inteins; they are joined with the C-terminal fragments that contain N-terminal inteins that are encoded elsewhere in the genome NP_487627.1 ORF_ID:all3587 NP_487633.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate NP_487634.1 ORF_ID:alr3594 NP_487639.1 ORF_ID:alr3599 NP_487640.1 interacts with the circadian clock regulator KaiC to maintain circadian rhythms NP_487642.1 probable long-chain-fatty-acid--CoA ligase NP_487646.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA NP_487648.1 similar to endoglucanase NP_487650.1 ORF_ID:alr3610 NP_487651.1 ORF_ID:alr3611 NP_487658.1 ORF_ID:alr3618 NP_487660.1 ORF_ID:alr3620 NP_487663.1 similar to type I site-specific deoxyribonuclease NP_487664.1 ORF_ID:all3624 NP_487665.1 similar to type I site-specific deoxyribonuclease NP_487670.1 ORF_ID:all3630 NP_487671.1 ORF_ID:all3631 NP_487672.1 ORF_ID:all3632 NP_487673.1 ORF_ID:all3633 NP_487674.1 similar to esterase NP_487676.1 ORF_ID:alr3636 NP_487678.1 This protein performs the mismatch recognition step during the DNA repair process NP_487682.1 ORF_ID:all3642 NP_487684.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP NP_487685.1 similar to XisI protein NP_487686.1 ORF_ID:alr3646 NP_487687.1 heterocyst specific ABC-transporter, membrane fusion protein DevB homolog NP_487688.1 heterocyst specific ABC-transporter, membrane spanning subunit DevC homolog NP_487689.1 heterocyst specific ABC-transporter, ATP-binding subunit DevA homolog NP_487691.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway NP_487692.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis NP_487693.1 ORF_ID:all3653 NP_487694.1 Uncharacterized RNA methyltransferase alr3654 NP_487695.1 photomixotrophic growth related protein, PmgA homolog NP_487698.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_487699.1 similar to S-layer-RTX protein NP_487700.1 ORF_ID:all3660 NP_487701.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring NP_487702.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth NP_487706.1 ORF_ID:alr3666 NP_487707.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter NP_487708.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active NP_487710.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits NP_487711.1 ORF_ID:alr3671 NP_487712.1 ORF_ID:alr3672 NP_487714.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not NP_487719.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis NP_487720.2 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde NP_487721.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer NP_487722.1 ORF_ID:all3682 NP_487723.1 ORF_ID:alr3683 NP_487724.1 binds and unfolds substrates as part of the ClpXP protease NP_487725.1 similar to esterase NP_487731.1 ORF_ID:all3691 NP_487735.1 ORF_ID:all3695 NP_487738.1 ORF_ID:alr3698 NP_487739.1 similar to glycosyltransferase NP_487740.1 ORF_ID:alr3700 NP_487741.1 ORF_ID:alr3701 NP_487742.1 similar to D,D-carboxypeptidase NP_487744.1 probable phosphoribosyltransferase NP_487745.1 probable sugar transporter NP_487746.1 ORF_ID:alr3706 NP_487747.1 Phycocyanobilin:ferredoxin oxidoreductase; catalyzes the reduction of biliverdin IX-alpha producing (3Z)-phycocyanobilin and oxidized ferredoxin NP_487750.1 ORF_ID:alr3710 NP_487751.1 ORF_ID:alr3711 NP_487752.1 ORF_ID:alr3712 NP_487756.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate NP_487757.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase NP_487761.1 ORF_ID:asl3721 NP_487762.1 ORF_ID:all3722 NP_487763.1 ORF_ID:alr3723 NP_487764.1 catalyzes the formation of fumarate from aspartate NP_487766.1 ORF_ID:asl3726 NP_487767.1 ORF_ID:alr3727 NP_487768.1 ORF_ID:all3728 NP_487771.1 ORF_ID:alr3731 NP_487772.1 ORF_ID:alr3732 NP_487774.1 ORF_ID:all3734 NP_487775.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate NP_487779.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication NP_487782.1 ORF_ID:alr3742 NP_487783.1 ORF_ID:all3743 NP_487784.1 probable phytoene dehydrogenase NP_487786.1 ORF_ID:all3746 NP_487788.1 similar to isochorismatase NP_487789.1 probable chlorohydrolase NP_487790.1 ORF_ID:all3750 NP_487791.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic NP_487793.1 probable short-chain dehydrogenase NP_487797.1 ORF_ID:alr3757 NP_487798.1 probable anti-sigma factor antagonist NP_487799.1 ORF_ID:all3759 NP_487801.1 ORF_ID:alr3761 NP_487802.1 ORF_ID:alr3762 NP_487804.1 ORF_ID:all3764 NP_487805.1 ORF_ID:all3765 NP_487806.1 ORF_ID:all3766 NP_487807.1 ORF_ID:all3767 NP_487808.1 ORF_ID:alr3768 NP_487811.1 ORF_ID:alr3771 NP_487813.1 ORF_ID:all3773 NP_487820.1 similar to kinesin light chain NP_487822.1 ORF_ID:all3782 NP_487828.1 ORF_ID:all3788 NP_487831.1 ORF_ID:all3791 NP_487834.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate NP_487835.1 involved in start site selection during the initiation of translation NP_487836.1 ORF_ID:asr3796 NP_487838.1 ORF_ID:alr3798 NP_487840.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; the sigma factors in this cluster are not required for growth or development, however may be involved in expression of nitrogen fixation genes NP_487842.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide NP_487844.1 transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine NP_487845.1 similar to dehydrogenase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_487848.1 ORF_ID:alr3808 NP_487849.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity NP_487850.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; the sigma factors in this cluster are not essential for growth or development; however they may be involved in the expression of nitrogen fixation genes and in dark/light adaption NP_487852.1 ORF_ID:alr3812 NP_487854.1 ORF_ID:alr3814 NP_487862.1 ORF_ID:all3822 NP_487863.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents NP_487868.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins NP_487869.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination NP_487872.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex NP_487876.1 ORF_ID:all3836 NP_487878.1 similar to kinesin light chain NP_487880.1 catalyzes the transfer of electrons from NADH to quinones NP_487881.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen NP_487882.1 Catalyzes the transfer of electrons from NADH to quinone NP_487883.1 ORF_ID:alr3843 NP_487884.1 Ycf48-like protein precursor; similar to Arabidopsis thaliana photosystem II assembly protein NP_487885.1 photosystem II reaction center subunit VI; associated with the reaction center of photosystem II NP_487886.1 photosystem II reaction center subunit VI; associated with the reaction center of photosystem II NP_487887.1 may have a role in PSII core assembly, maintaining PSII dimers and donor side electron transfer NP_487888.1 may be involved in assembling and maintaining PSII complexes in the thylakoid membrane NP_487889.1 ORF_ID:asl3849 NP_487893.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls the expression of genes coding cell surface proteins involved in motility and growth on nitrogen NP_487894.1 ORF_ID:all3854 NP_487896.1 similar to WD repeat protein NP_487898.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function NP_487899.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione NP_487900.1 ORF_ID:asl3860 NP_487902.1 ORF_ID:all3862 NP_487905.1 ORF_ID:all3865 NP_487906.1 probable dioxygenase, Rieske iron-sulfur component NP_487907.1 aminotransferase NP_487910.1 ORF_ID:all3870 NP_487911.1 amylomaltase; acts to release glucose from maltodextrins NP_487915.1 ORF_ID:all3875 NP_487916.2 catalyzes the formation of precorrin-8x from precorrin-6y NP_487917.1 ORF_ID:alr3877 NP_487919.1 catalyze the formation of cyanophycin which may act to store excess nitrogen NP_487920.1 ORF_ID:all3880 NP_487922.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA NP_487923.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate NP_487924.1 ORF_ID:alr3884 NP_487925.1 probable phosphoribosylaminoimidazole carboxylase catalytic subunit NP_487927.1 catalyzes the formation of arginine from (N-L-arginino)succinate NP_487931.1 probable flavoprotein NP_487935.1 probable flavoprotein NP_487936.1 Type III pantothenate kinase; type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP NP_487937.1 similar to glucose 1-dehydrogenase NP_487938.1 similar to 2-hydroxy-6-ketonona-2,4-dienoate hydrolase NP_487939.1 ORF_ID:all3899 NP_487941.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress NP_487943.1 ORF_ID:all3903 NP_487949.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III NP_487951.1 ORF_ID:alr3911 NP_487952.1 catalyzes the conversion of N-acetyl_L-aspartic acid (NAA) to aspartate and acetate NP_487953.1 ORF_ID:all3913 NP_487954.1 ORF_ID:all3914 NP_487958.1 ORF_ID:all3918 NP_487960.1 ORF_ID:alr3920 NP_487961.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis NP_487962.1 ORF_ID:all3922 NP_487964.1 probable penicillin amidase NP_487974.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid NP_487975.1 ORF_ID:asr3935 NP_487976.1 cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase NP_487977.1 ORF_ID:alr3937 NP_487978.1 ORF_ID:alr3938 NP_487983.2 catalyzes the ATP-dependent transport of cobalt NP_487984.1 periplasmic cobalt binding component of the cobalt transport system NP_487985.1 ORF_ID:alr3945 NP_487986.1 ORF_ID:alr3946 NP_487987.1 ORF_ID:alr3947 NP_487988.1 ORF_ID:alr3948 NP_487989.1 ORF_ID:alr3949 NP_487992.1 ORF_ID:alr3952 NP_487993.1 transcriptional regulator, RbcR homolog NP_487995.1 ORF_ID:alr3955 NP_487996.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_487997.1 Shuttles electrons from NAD(P)H, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain NP_488004.1 ORF_ID:all3964 NP_488007.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys NP_488009.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif NP_488010.1 ORF_ID:all3970 NP_488011.1 zinc metalloprotease all3971 NP_488016.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_488019.1 ORF_ID:alr3979 NP_488022.1 ORF_ID:alr3982 NP_488023.1 similar to surface layer protein NP_488025.1 ORF_ID:all3985 NP_488026.1 ORF_ID:all3986 NP_488029.1 ORF_ID:all3989 NP_488032.1 Photosystem II reaction center protein Z (PSII-Z); controls the interaction of photosystem II cores with light-harvesting antenna NP_488033.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not NP_488035.1 ORF_ID:alr3995 NP_488037.1 ORF_ID:alr3997 NP_488040.1 photosystem II CP43 protein PsbC homolog NP_488041.1 ORF_ID:all4001 NP_488042.1 photosystem II CP43 protein PsbC homolog NP_488043.1 photosystem II CP43 protein PsbC homolog NP_488048.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_488051.1 probable oxidoreductase NP_488052.1 ORF_ID:all4012 NP_488053.1 ORF_ID:all4013 NP_488058.1 OxPPCycle protein OpcA NP_488059.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate NP_488060.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate NP_488061.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate NP_488062.1 ORF_ID:asl4022 NP_488063.1 ORF_ID:all4023 NP_488064.1 ORF_ID:all4024 NP_488065.1 similar to AmpG-signal transducer NP_488066.1 similar to TonB-dependent receptor NP_488068.1 similar to vitamin B12 transport protein NP_488069.1 similar to vitamin B12 transport protein NP_488071.1 ORF_ID:alr4031 NP_488072.1 ORF_ID:alr4032 NP_488073.1 ORF_ID:alr4033 NP_488077.1 ORF_ID:all4037 NP_488084.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons NP_488092.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_488094.2 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate NP_488095.1 ORF_ID:all4055 NP_488097.1 similar to peptide synthetase NP_488098.1 similar to isovaleryl-CoA dehydrogenase NP_488100.1 probable alginate O-acetylation protein NP_488103.1 ORF_ID:all4063 NP_488105.1 ORF_ID:alr4065 NP_488108.1 ORF_ID:alr4068 NP_488111.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 NP_488112.1 similar to iron-regulated protein NP_488120.1 ORF_ID:all4080 NP_488122.1 ORF_ID:alr4082 NP_488125.1 Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures NP_488127.1 ORF_ID:all4087 NP_488128.1 ORF_ID:alr4088 NP_488130.1 similar to carboxyl-terminal processing proteinase NP_488134.1 ORF_ID:alr4094 NP_488136.1 ORF_ID:all4096 NP_488137.1 ORF_ID:all4097 NP_488139.1 ORF_ID:alr4099 NP_488141.1 Ycf91-like protein. NP_488143.1 ORF_ID:all4103 NP_488144.1 ORF_ID:alr4104 NP_488145.1 ORF_ID:alr4105 NP_488146.1 probable oxidoreductase NP_488147.1 ORF_ID:all4107 NP_488150.1 probable cation transporter NP_488151.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_488152.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation NP_488160.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine NP_488161.1 ORF_ID:all4121 NP_488163.1 Catalyzes a reaction in which the CO2 acceptor molecule, RuBP, is generated via the phosphorylation of ribulose 5-phosphate with ATP NP_488164.2 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase NP_488166.1 ORF_ID:all4126 NP_488169.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis along with cofG NP_488170.1 ORF_ID:all4130 NP_488171.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway NP_488180.1 ORF_ID:all4140 NP_488181.1 ORF_ID:alr4141 NP_488185.1 probable DNA-binding stress protein NP_488187.1 ORF_ID:alr4147 NP_488188.1 ORF_ID:all4148 NP_488189.1 ORF_ID:alr4149 NP_488190.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn NP_488193.1 sporulation-control protein Spo0M homolog NP_488196.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_488197.1 catalyzes the transfer of electrons from NADH to ubiquinone; NdhD3 is associated with a low CO2-induced uptake system NP_488200.1 probable glycosyltransferase NP_488204.1 ORF_ID:alr4164 NP_488205.1 ORF_ID:alr4165 NP_488206.1 ORF_ID:alr4166 NP_488207.1 ORF_ID:alr4167 NP_488208.1 probable glycosyltransferase NP_488213.1 ORF_ID:alr4173 NP_488214.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate NP_488215.1 DNA repair protein recO (Recombination protein O); involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA NP_488218.1 probable glycosyltransferase NP_488222.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate NP_488223.1 ORF_ID:all4183 NP_488225.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 NP_488226.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome NP_488227.1 forms a direct contact with the tRNA during translation NP_488228.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit NP_488229.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability NP_488230.1 is a component of the macrolide binding site in the peptidyl transferase center NP_488231.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme NP_488232.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 NP_488233.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA NP_488234.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif NP_488235.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 NP_488236.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP NP_488237.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase NP_488238.1 late assembly protein NP_488239.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance NP_488240.1 binds 5S rRNA along with protein L5 and L25 NP_488241.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance NP_488242.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit NP_488243.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 NP_488244.2 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel NP_488245.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase NP_488246.1 primary binding protein; helps mediate assembly; involved in translation fidelity NP_488247.1 one of the stabilizing components for the large ribosomal subunit NP_488248.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e NP_488249.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation NP_488250.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center NP_488251.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA NP_488252.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation NP_488253.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel NP_488254.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA NP_488255.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin NP_488261.1 similar to epoxide hydrolase NP_488263.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) NP_488272.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway NP_488275.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate NP_488278.1 similar to phytase NP_488279.1 ORF_ID:alr4239 NP_488280.1 ORF_ID:alr4240 NP_488282.1 ORF_ID:all4242 NP_488283.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex NP_488284.1 ORF_ID:asl4244 NP_488285.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions NP_488286.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions NP_488288.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity NP_488289.1 ORF_ID:alr4249 NP_488290.1 probable N-acetyltransferase NP_488291.1 ORF_ID:alr4251 NP_488292.1 probable oxidoreductase NP_488295.1 ORF_ID:alr4255 NP_488296.1 ORF_ID:all4256 NP_488297.1 ORF_ID:all4257 NP_488301.1 ORF_ID:all4261 NP_488303.1 cytochrome b6-f complex subunit 8; with PetL, PetG and PetM makes up the small subunit of the cytochrome b6-f complex; cytochrome b6-f mediates electron transfer between photosystem II and photosystem I NP_488307.1 similar to acriflavine resistance protein NP_488308.1 dihydroflavonol 4-reductase NP_488312.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors NP_488314.1 probable 2-octaprenyl-6-methoxyphenol 4-monoxygenase; UbiH; Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone NP_488317.1 ORF_ID:alr4277 NP_488319.1 ORF_ID:all4279 NP_488320.1 heterocyst specific ABC-transporter, membrane fusion protein DevB homolog NP_488321.1 heterocyst specific ABC-transporter, membrane spanning subunit DevC homolog NP_488322.1 heterocyst specific ABC-transporter, ATP-binding subunit DevA homolog NP_488324.1 ORF_ID:all4284 NP_488326.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP. NP_488327.1 ORF_ID:all4287 NP_488329.1 Photosystem I assembly protein ycf4; required for the assembly of photosystem I complex NP_488330.1 ORF_ID:alr4290 NP_488331.1 ORF_ID:alr4291 NP_488334.1 probable N-acetylmuramoyl-L-alanine amidase NP_488351.1 ORF_ID:alr4311 NP_488352.1 ORF_ID:all4312 NP_488356.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan NP_488358.1 ORF_ID:alr4318 NP_488359.1 Stabilizes the interaction between PsaC and the photosystem I core NP_488360.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases NP_488362.1 ORF_ID:alr4322 NP_488363.1 probable glycosyl transferase NP_488365.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA NP_488367.1 probable aminotransferase; catalyzes the formation of LL-diaminopimelate from tetrahydrodipicolinate; involved in lysine and peptidoglycan synthesis NP_488371.1 ORF_ID:alr4331 NP_488372.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids NP_488374.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis NP_488376.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex NP_488377.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu NP_488378.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene NP_488379.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit NP_488380.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance NP_488382.1 ORF_ID:all4342 NP_488384.1 ORF_ID:alr4344 NP_488385.1 ORF_ID:all4345 NP_488391.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate NP_488394.1 cell death suppressor protein Lls1 homolog NP_488395.1 similar to DnaJ protein NP_488397.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_488398.1 ClpR variant present in an operon with ClpP3 in Synechococcus PCC7942; ClpR is missing the catalytic triad Ser-His-Asp characteristic of serine-type proteases; the exact function of ClpR and ClpP3 is unknown however they appear to be necessary for cell viability; hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_488405.1 catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis NP_488406.1 ORF_ID:alr4366 NP_488408.1 ORF_ID:alr4368 NP_488410.1 ORF_ID:alr4370 NP_488414.1 probable fibronectin/fibrinogen-binding protein NP_488416.1 probable glycosyl transferase NP_488417.1 ORF_ID:all4377 NP_488419.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein NP_488420.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate NP_488423.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene NP_488425.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate NP_488426.1 ORF_ID:alr4386 NP_488429.1 ORF_ID:all4389 NP_488430.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis NP_488431.1 NADH-dependent; catalyzes a key regulatory step in fatty acid biosynthesis NP_488432.1 ORF_ID:alr4392 NP_488436.1 ORF_ID:all4396 NP_488437.1 acetyltransferase NP_488438.1 SNF2 helicase homolog NP_488439.1 ORF_ID:all4399 NP_488440.1 ORF_ID:all4400 NP_488444.1 ORF_ID:alr4404 NP_488451.1 ORF_ID:all4411 NP_488456.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis NP_488460.1 ORF_ID:all4420 NP_488462.1 ORF_ID:all4422 NP_488464.1 probable glucosyltransferase NP_488466.1 probable glucosyltransferase NP_488467.1 similar to phytanoyl-CoA hydroxylase NP_488469.1 similar to hemolytic protein HlpA NP_488470.1 probable polysaccharide biosynthesis protein NP_488471.1 ORF_ID:all4431 NP_488472.1 probable exopolysaccharide biosynthesis protein NP_488476.1 probable glycosyl transferase NP_488477.1 probable glycosyl transferase NP_488478.1 ORF_ID:alr4438 NP_488479.1 ORF_ID:alr4439 NP_488481.1 probable glycosyl transferase NP_488484.1 ORF_ID:all4444 NP_488486.1 ORF_ID:all4446 NP_488487.1 probable 1-aminocyclopropane-1-carboxylate deaminase NP_488488.1 ORF_ID:alr4448 NP_488490.1 ORF_ID:all4450 NP_488491.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit NP_488492.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif NP_488494.1 ORF_ID:alr4454 NP_488495.1 6-oxocamphor hydrolase NP_488496.1 tropinone reductase homolog NP_488498.1 probable dehydrogenase NP_488501.1 ORF_ID:all4461 NP_488504.1 ORF_ID:all4464 NP_488505.1 ORF_ID:all4465 NP_488506.1 ORF_ID:alr4466 NP_488508.1 probable phosphinothricin N-acetyltransferase NP_488517.1 ORF_ID:all4477 NP_488520.1 ORF_ID:all4480 NP_488525.1 ORF_ID:alr4485 NP_488526.1 ORF_ID:alr4486 NP_488529.1 ORF_ID:alr4489 NP_488530.1 ORF_ID:alr4490 NP_488531.1 ORF_ID:alr4491 NP_488532.1 probable glycosyltransferase NP_488533.1 probable glycosyltransferase NP_488534.1 ORF_ID:alr4494 NP_488535.1 ORF_ID:all4495 NP_488536.1 ORF_ID:all4496 NP_488540.1 ORF_ID:all4500 NP_488541.1 ORF_ID:all4501 NP_488542.1 ORF_ID:all4502 NP_488543.1 ORF_ID:all4503 NP_488546.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide NP_488551.1 Rieske protein, with cytochrome b6, cytochrome f, and subunit IV, makes up the large subunit of the cytochrome b6-f complex; cytochrome b6-f mediates electron transfer between photosystem II and photosystem I NP_488552.1 ORF_ID:alr4512 NP_488556.1 probable protein phosphatase NP_488557.1 phycobilisome degradation protein; NblA NP_488558.1 ORF_ID:all4518 NP_488560.1 Anhydro-N-acetylmuramic acid kinase; catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling NP_488566.1 similar to flotillin NP_488568.1 similar to flotillin NP_488573.1 signal transducer ampG1 homolog NP_488578.1 ORF_ID:all4538 NP_488579.1 ORF_ID:all4539 NP_488582.1 probable methyltransferase NP_488586.1 ORF_ID:all4546 NP_488588.1 ORF_ID:alr4548 NP_488589.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction NP_488592.1 ORF_ID:alr4552 NP_488593.1 similar to heat shock protein DnaJ NP_488594.1 6-pyruvoyl-tetrahydropterin synthase homolog NP_488597.1 ORF_ID:asl4557 NP_488598.1 probable dioxygenase Rieske iron-sulfur component NP_488599.1 ORF_ID:alr4559 NP_488603.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis NP_488604.1 ORF_ID:alr4564 NP_488606.1 ORF_ID:alr4566 NP_488607.1 ORF_ID:alr4567 NP_488610.1 ORF_ID:alr4570 NP_488611.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine NP_488612.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation NP_488613.1 ORF_ID:all4573 NP_488614.1 ORF_ID:all4574 NP_488615.1 ORF_ID:all4575 NP_488617.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis NP_488619.1 ORF_ID:alr4579 NP_488622.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis NP_488623.1 ORF_ID:alr4583 NP_488625.1 ORF_ID:alr4585 NP_488626.1 ORF_ID:alr4586 NP_488630.1 ORF_ID:all4590 NP_488631.1 Isopentenyl-diphosphate delta-isomerase; catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate NP_488632.1 ORF_ID:alr4592 NP_488636.1 ORF_ID:alr4596 NP_488637.1 ORF_ID:alr4597 NP_488642.1 ORF_ID:alr4602 NP_488644.1 ORF_ID:alr4604 NP_488645.1 ORF_ID:asr4605 NP_488647.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine NP_488648.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor NP_488649.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein NP_488653.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit NP_488656.1 similar to ferrochelatase NP_488659.1 similar to pathogenesis related protein NP_488660.1 ORF_ID:all4620 NP_488663.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits NP_488667.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit NP_488668.1 ORF_ID:alr4628 NP_488673.1 probable ion transporter NP_488674.1 probable cytosine deaminase NP_488675.1 ORF_ID:all4635 NP_488676.1 similar to two-component sensor histidine kinase NP_488681.1 ORF_ID:alr4641 NP_488682.1 thiol-specific antioxidant protein NP_488683.1 ORF_ID:all4643 NP_488685.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate NP_488686.1 ORF_ID:alr4646 NP_488688.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits NP_488694.1 ORF_ID:asl4654 NP_488696.1 probable sugar kinase, FGGY family NP_488697.1 ORF_ID:asr4657 NP_488701.1 ORF_ID:alr4661 NP_488702.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription NP_488707.2 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium NP_488708.1 ORF_ID:all4668 NP_488710.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP NP_488713.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate NP_488714.1 transcripton factor for heterocyst differentiation DevT NP_488715.1 ORF_ID:all4675 NP_488717.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE NP_488720.1 ORF_ID:all4680 NP_488721.1 probable sugar kinase NP_488722.1 ORF_ID:alr4682 NP_488723.1 ORF_ID:alr4683 NP_488726.1 ORF_ID:alr4686 NP_488727.1 ORF_ID:all4687 NP_488732.1 ORF_ID:alr4692 NP_488737.1 ORF_ID:all4697 NP_488738.1 ORF_ID:all4698 NP_488739.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein NP_488740.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA NP_488743.1 ORF_ID:alr4703 NP_488745.1 DNA polymerase III, delta prime subunit; catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA NP_488748.1 ORF_ID:all4708 NP_488753.1 ORF_ID:all4713 NP_488755.1 ORF_ID:alr4715 NP_488756.1 ORF_ID:alr4716 NP_488757.1 ORF_ID:alr4717 NP_488758.1 ORF_ID:alr4718 NP_488759.1 similar to glucosyltransferase NP_488761.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer NP_488763.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) NP_488765.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate NP_488766.1 ORF_ID:all4726 NP_488767.1 ORF_ID:all4727 NP_488770.1 ORF_ID:all4730 NP_488771.1 ORF_ID:all4731 NP_488772.1 ORF_ID:all4732 NP_488773.1 ORF_ID:alr4733 NP_488778.1 ORF_ID:alr4738 NP_488785.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide NP_488786.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water NP_488790.1 ORF_ID:all4750 NP_488791.1 Probable inorganic polyphosphate/ATP-NAD kinase 1; catalyzes the phosphorylation of NAD to NADP NP_488794.1 Ycf31; cytochrome b6-f complex subunit 7; with PetL, PetG and PetN makes up the small subunit of the cytochrome b6-f complex; cytochrome b6-f mediates electron transfer between photosystem II and photosystem I NP_488795.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) NP_488796.1 ORF_ID:all4756 NP_488799.1 ORF_ID:all4759 NP_488806.1 ORF_ID:alr4766 NP_488811.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate NP_488813.1 ORF_ID:alr4773 NP_488814.1 catalyzes the formation of glutamate from glutamine NP_488815.1 photosystem I subunit PsaK; maybe involved in the assembly of PSI monomers into trimers; active under low light conditions NP_488816.1 ORF_ID:all4776 NP_488818.1 ORF_ID:all4778 NP_488820.1 probable monooxygenase NP_488821.1 ORF_ID:alr4781 NP_488824.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis NP_488825.1 similar to 50S ribosomal protein L25; the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response NP_488826.1 carboxymethylenebutenolidase NP_488829.1 catalyzes branch migration in Holliday junction intermediates NP_488831.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu NP_488832.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit NP_488838.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming NP_488840.1 similar to anti-sigma factor antagonist NP_488842.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 NP_488843.1 ORF_ID:alr4803 NP_488846.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate NP_488847.1 probable glycosyltransferase NP_488848.1 competence-damage inducible protein CinA homolog NP_488849.1 ORF_ID:asr4809 NP_488851.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis NP_488852.1 ORF_ID:alr4812 NP_488853.1 ORF_ID:all4813 NP_488855.1 ORF_ID:alr4815 NP_488856.1 ORF_ID:all4816 NP_488857.1 ORF_ID:all4817 NP_488858.1 similar to Bpu10I restriction endonuclease beta subunit NP_488862.1 similar to beta-lactamase NP_488863.1 similar to glucosyl-1-phosphate transferase NP_488864.1 ORF_ID:all4824 NP_488866.1 ORF_ID:all4826 NP_488867.1 ORF_ID:asl4827 NP_488868.1 ORF_ID:all4828 NP_488869.1 ORF_ID:all4829 NP_488870.1 ORF_ID:all4830 NP_488871.1 ORF_ID:alr4831 NP_488872.1 similar to Na+/H+ antiporter NP_488873.1 ORF_ID:alr4833 NP_488874.1 ORF_ID:all4834 NP_488878.1 ORF_ID:all4838 NP_488880.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis NP_488881.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate NP_488882.1 ORF_ID:alr4842 NP_488885.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily NP_488886.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate NP_488888.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities NP_488889.1 ORF_ID:alr4849 NP_488891.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins NP_488893.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate NP_488901.2 catalyzes the formation of oxaloacetate from phosphoenolpyruvate NP_488904.1 ORF_ID:alr4864 NP_488906.1 ORF_ID:alr4866 NP_488907.1 ORF_ID:all4867 NP_488908.1 ORF_ID:all4868 NP_488910.1 ORF_ID:alr4870 NP_488912.1 cytidine and deoxycytidylate deaminase NP_488913.1 ORF_ID:all4873 NP_488917.1 ORF_ID:alr4877 NP_488918.1 ORF_ID:alr4878 NP_488919.1 ORF_ID:alr4879 NP_488920.1 ORF_ID:alr4880 NP_488922.1 ORF_ID:alr4882 NP_488923.1 transfers electrons from NAD(P)H to quinons in the respiratory chain NP_488927.1 ORF_ID:all4887 NP_488931.1 probable chloride channel protein NP_488938.1 ORF_ID:alr4898 NP_488940.1 ORF_ID:all4900 NP_488944.1 similar to mobilization protein MobD NP_488945.1 ORF_ID:alr4905 NP_488946.1 ORF_ID:all4906 NP_488947.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation NP_488948.1 ORF_ID:alr4908 NP_488949.1 similar to DNA repair protein rad25 NP_488963.1 ORF_ID:all4923 NP_488964.1 ORF_ID:all4924 NP_488965.1 ORF_ID:all4925 NP_488967.1 ORF_ID:all4927 NP_488968.1 similar to two-component response regulator NP_488972.1 ORF_ID:alr4932 NP_488973.1 probable glycosyltransferase NP_488974.1 ORF_ID:alr4934 NP_488976.1 ORF_ID:all4936 NP_488984.1 ORF_ID:alr4944 NP_488989.1 ORF_ID:alr4949 NP_488994.1 ORF_ID:alr4954 NP_488995.1 ORF_ID:all4955 NP_488996.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_488998.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily NP_488999.1 unknown function; YciI from Haemophilus influenzae has a crystal structure similar to a muconolactone isomerase, but does not seem to catalyze any of the reactions predicted from the sequence or structure similarity NP_489001.1 ORF_ID:alr4961 NP_489003.1 ORF_ID:all4963 NP_489006.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis NP_489008.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense NP_489013.1 heterocyst specific ABC-transporter, membrane fusion protein DevB homolog NP_489014.1 heterocyst specific ABC-transporter, membrane spanning subunit DevC homolog NP_489015.1 heterocyst specific ABC-transporter, ATP-binding subunit DevA homolog NP_489016.1 ORF_ID:alr4976 NP_489017.1 ORF_ID:alr4977 NP_489018.1 ORF_ID:all4978 NP_489025.1 ORF_ID:all4985 NP_489026.1 ORF_ID:all4986 NP_489030.1 ORF_ID:alr4990 NP_489031.1 ORF_ID:all4991 NP_489038.1 ORF_ID:all4998 NP_489039.1 ORF_ID:all4999 NP_489040.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer NP_489042.1 ORF_ID:all5002 NP_489043.1 ORF_ID:all5003 NP_489047.1 similar to cell death suppressor protein Lls1 NP_489048.1 ORF_ID:all5008 NP_489050.1 ORF_ID:alr5010 NP_489052.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG NP_489059.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis NP_489062.1 ORF_ID:all5022 NP_489063.1 probable hydrolase NP_489074.1 methanol dehydrogenase regulatory protein MorR homolog NP_489078.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane NP_489079.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit NP_489082.1 ORF_ID:all5042 NP_489083.1 ORF_ID:all5043 NP_489084.1 ORF_ID:all5044 NP_489085.1 ORF_ID:alr5045 NP_489087.1 ORF_ID:all5047 NP_489090.1 shuttles electrons from NAD(P)H, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunit D, with NdhB and NdhF are core membrane components NP_489093.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) NP_489096.1 ORF_ID:all5056 NP_489097.1 ORF_ID:all5057 NP_489098.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA NP_489101.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP NP_489102.1 NAD and NADP-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; this isozyme is involved in the photosynthetic carbon assimilation pathway in Anabaena NP_489103.1 ORF_ID:all5063 NP_489105.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis NP_489106.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis NP_489108.1 ORF_ID:alr5068 NP_489109.1 ORF_ID:all5069 NP_489110.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation NP_489114.1 ORF_ID:all5074 NP_489116.1 light-independent reduction of protochlorophyllide to form chlorophyllide a NP_489118.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production NP_489124.1 ORF_ID:alr5084 NP_489128.1 Nucleoside-triphosphatase; HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine NP_489129.1 ORF_ID:all5089 NP_489134.1 ORF_ID:all5094 NP_489135.1 Queuosine biosynthesis protein queC NP_489139.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate NP_489141.1 ORF_ID:alr5101 NP_489143.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis NP_489157.1 probable dehydrogenase NP_489158.1 probable glycosyl transferase NP_489165.1 ORF_ID:alr5125 NP_489167.1 ORF_ID:alr5127 NP_489168.1 Protein ycf12. NP_489171.1 ORF_ID:all5131 NP_489176.1 ORF_ID:all5136 NP_489178.2 ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms NP_489187.1 ORF_ID:alr5147 NP_489190.1 ORF_ID:alr5150 NP_489192.1 Ribonuclease Z; member of metallo-beta-lactamase; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions NP_489194.1 with PsaB binds the primary electron donor of photosystem I, P700, and subsequent electron acceptors as part of photosystem I NP_489195.1 with PsaA binds the primary electron donor of photosystem I, P700, and subsequent electron acceptors as part of photosystem I NP_489197.1 ORF_ID:alr5157 NP_489198.1 ORF_ID:alr5158 NP_489204.1 ORF_ID:alr5164 NP_489207.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers NP_489212.1 ORF_ID:all5172 NP_489213.1 ORF_ID:all5173 NP_489214.1 ORF_ID:all5174 NP_489217.1 molybdenum-pterin binding protein homolog NP_489218.1 ORF_ID:alr5178 NP_489219.1 ORF_ID:all5179 NP_489222.1 ORF_ID:alr5182 NP_489224.1 ORF_ID:all5184 NP_489225.1 Enables the enzymatic reduction of mercuric ions to elemental mercury NP_489228.1 ORF_ID:alr5188 NP_489229.1 ORF_ID:alr5189 NP_489233.1 ORF_ID:all5193 NP_489234.1 ORF_ID:all5194 NP_489235.1 ORF_ID:all5195 NP_489239.1 ORF_ID:alr5199 NP_489240.1 phosphoglycerate mutase NP_489241.1 ORF_ID:alr5201 NP_489242.1 ORF_ID:alr5202 NP_489243.1 probable glycosyl transferase NP_489244.1 ORF_ID:alr5204 NP_489246.1 probable reverse transcriptase NP_489247.1 ORF_ID:all5207 NP_489250.1 ORF_ID:all5210 NP_489251.1 probable NADH dehydrogenase NP_489255.1 ORF_ID:all5215 NP_489256.1 probable hemolysin NP_489258.1 modulator of DNA gyrase; PmbA NP_489259.1 modulator of DNA gyrase; TldD NP_489263.1 ORF_ID:alr5223 NP_489267.1 ORF_ID:alr5227 NP_489268.1 ORF_ID:alr5228 NP_489275.1 probable glycosyl transferase NP_489277.1 probable glycosyl transferase NP_489278.1 ORF_ID:alr5238 NP_489280.1 ORF_ID:alr5240 NP_489289.1 probable transcription accessory protein NP_489291.1 ORF_ID:alr5251 NP_489292.1 probable methyltransferase; Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone NP_489294.1 probable sodium-dependent transporter NP_489296.1 ORF_ID:alr5256 NP_489297.1 probable peptidase NP_489298.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine NP_489300.1 ORF_ID:alr5260 NP_489302.1 ORF_ID:asr5262 NP_489303.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria NP_489305.1 negatively supercoils closed circular double-stranded DNA NP_489306.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity NP_489309.1 ORF_ID:alr5269 NP_489312.1 ORF_ID:alr5272 NP_489315.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate NP_489316.1 ORF_ID:all5276 NP_489317.1 ORF_ID:asl5277 NP_489318.1 ORF_ID:all5278 NP_489322.1 ORF_ID:all5282 NP_489325.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein NP_489326.1 probable short-chain dehydrogenase NP_489327.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer NP_489328.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis NP_489329.1 similar to subunit X of photosystem I PsaK; unknown protein NP_489330.1 similar to photosystem I PsaK NP_489331.1 similar to alkaline phosphatase NP_489334.1 probable cation efflux system protein NP_489335.1 dihydrokaempferol 4-reductase NP_489336.1 ORF_ID:alr5296 NP_489337.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site NP_489338.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force NP_489339.1 Modulates Rho-dependent transcription termination NP_489340.1 binds directly to 23S ribosomal RNA NP_489341.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA NP_489342.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit NP_489343.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors NP_489344.1 similar to hemolysin secretion protein D NP_489346.1 ORF_ID:all5306 NP_489347.1 probable glycosyl transferase NP_489348.1 ORF_ID:all5308 NP_489349.1 ORF_ID:all5309 NP_489354.1 with PsaA binds the primary electron donor of photosystem I, P700, and subsequent electron acceptors as part of photosystem I NP_489358.1 ORF_ID:alr5318 NP_489362.1 similar to Na+/H+-exchanging protein NP_489363.1 two-component transcription regulator, complementary chromatic adaptation protein RcaC homolog NP_489364.1 ORF_ID:alr5324 NP_489366.1 ORF_ID:alr5326 NP_489367.1 ORF_ID:all5327 NP_489368.1 ORF_ID:alr5328 NP_489371.1 ORF_ID:alr5331 NP_489374.1 ORF_ID:all5334 NP_489376.1 similar to TRK system potassium uptake protein NP_489377.1 similar to TRK system potassium uptake protein NP_489378.1 ORF_ID:alr5338 NP_489381.1 probable glycosyl transferase NP_489385.1 ORF_ID:all5345 NP_489386.1 heterocyst specific ABC-transporter, membrane spanning subunit DevC homolog NP_489387.1 heterocyst specific ABC-transporter, membrane fusion protein DevB homolog NP_489391.1 ORF_ID:alr5351 NP_489394.1 ORF_ID:alr5354 NP_489395.1 ORF_ID:alr5355 NP_489397.1 ORF_ID:alr5357 NP_489398.1 ORF_ID:alr5358 NP_489399.1 ORF_ID:all5359 NP_489402.1 ORF_ID:alr5362 NP_489407.1 ORF_ID:alr5367 NP_489408.1 ORF_ID:alr5368 NP_489410.1 probable methyltransferase YP_227614.1 ORF_ID:all7001 NP_490113.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown NP_490116.1 similar to hemolysin export system membrane fusion protein HlyD NP_490135.1 hypotheticaln protein NP_490147.1 ribosomal protein S7 homolog NP_490158.1 probable acetyltransferase NP_490172.1 hypotheticaln protein NP_490201.1 probable acetyltransferase NP_490228.1 probable transporter NP_490234.1 similar to HlyA, RTX family NP_490263.1 putative helicase NP_490268.1 ypothetical protein NP_490276.1 probable acetyltransferase NP_490278.1 putative helicase NP_490290.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family NP_490319.1 transfer complex protein TrsK homolog NP_490347.1 reverse transcriptase homolog NP_490348.1 reverse transcriptase homolog NP_490349.1 ankyrin homolog NP_490360.1 DNA damage inducible protein P homolog NP_490367.1 sugar-non-specific nuclease NucA homolog NP_490368.1 sugar-non-specific nuclease inhibitor NuiA homolog NP_490376.1 site-specific DNA-methyltransferase homolog NP_490410.1 hlyA homolog NP_490414.1 reverse transcriptase homolog YP_227615.1 all7313; ORF_ID:all7313; hypothetical protein YP_227616.1 ORF_ID:all7314; hlyD gene product YP_227617.1 ORF_ID:all7315; hlyB gene product YP_227618.1 all7316; ORF_ID:all7316; hypothetical protein YP_227619.1 all7317; ORF_ID:all7317; unknown protein YP_227620.1 alr7318; ORF_ID:alr7318; hypothetical protein YP_227621.1 all7319; ORF_ID:all7319; hypothetical protein YP_227622.1 all7320; ORF_ID:all7320; hypothetical protein YP_227623.1 alr7321; ORF_ID:alr7321; unknown protein YP_227624.1 asl7322; ORF_ID:asl7322; unknown protein YP_227688.1 ORF_ID:alr7323 YP_227625.1 all7324; ORF_ID:all7324; hypothetical protein YP_227626.1 ORF_ID:alr7325 YP_227627.1 alr7326; ORF_ID:alr7326; unknown protein YP_227628.1 asl7327; ORF_ID:asl7327; unknown protein YP_227629.1 asl7328; ORF_ID:asl7328; hypothetical protein YP_227630.1 ORF_ID:alr7329 YP_227631.1 asr7330; ORF_ID:asr7330; unknown protein YP_227632.1 all7331; ORF_ID:all7331; unknown protein YP_227633.1 all7332; ORF_ID:all7332; hypothetical protein YP_227634.1 alr7333; ORF_ID:alr7333; putative nuclease YP_227635.1 alr7334; ORF_ID:alr7334; unknown protein YP_227636.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis YP_227637.1 alr7336; ORF_ID:alr7336; hypothetical protein YP_227638.1 alr7337; ORF_ID:alr7337; hypothetical protein YP_227639.1 asr7338; ORF_ID:asr7338; hypothetical protein YP_227640.1 asr7339; ORF_ID:asr7339; hypothetical protein YP_227641.1 asr7340; ORF_ID:asr7340; unknown protein YP_227642.1 alr7341; ORF_ID:alr7341; unknown protein YP_227643.1 alr7342; ORF_ID:alr7342; putative nuclease YP_227644.1 asr7343; ORF_ID:asr7343; unknown protein YP_227645.1 all7344; ORF_ID:all7344; unknown protein YP_227646.1 alr7345; ORF_ID:alr7345; hypothetical protein YP_227647.1 alr7346; ORF_ID:alr7346; unknown protein YP_227648.1 all7347; ORF_ID:all7347; unknown protein YP_227649.1 all7348; ORF_ID:all7348; lethal leaf-spot 1 homolog YP_227650.1 ORF_ID:alr7349 YP_227651.1 ORF_ID:alr7350 YP_227652.1 all7351; ORF_ID:all7351; hypothetical protein YP_227653.1 alr7352; ORF_ID:alr7352; hypothetical protein YP_227654.1 all7353; ORF_ID:all7353; hypothetical protein YP_227655.1 ORF_ID:alr7354 YP_227656.1 all7355; ORF_ID:all7355; unknown protein YP_227657.1 asl7356; ORF_ID:asl7356; unknown protein YP_227658.1 alr7357; ORF_ID:alr7357; unknown protein YP_227659.1 alr7358; ORF_ID:alr7358; unknown protein YP_227660.1 asl7359; ORF_ID:asl7359; unknown protein YP_227661.1 all7360; ORF_ID:all7360; hypothetical protein YP_227662.1 ORF_ID:alr7361; nuiA gene product YP_227663.1 ORF_ID:all7362; nucA gene product YP_227664.1 asr7363; ORF_ID:asr7363; hypothetical protein YP_227665.1 all7364; ORF_ID:all7364; unknown protein YP_227666.1 asl7365; ORF_ID:asl7365; unknown protein YP_227667.1 all7366; ORF_ID:all7366; unknown protein YP_227668.1 all7367; ORF_ID:all7367; unknown protein YP_227669.1 all7368; ORF_ID:all7368; unknown protein YP_227670.1 ORF_ID:all7369 YP_227671.1 all7370; ORF_ID:all7370; hypothetical protein YP_227672.1 asr7371; ORF_ID:asr7371; unknown protein YP_227673.1 all7372; ORF_ID:all7372; hypothetical protein YP_227674.1 all7373; ORF_ID:all7373; unknown protein YP_227675.1 all7374; ORF_ID:all7374; unknown protein YP_227676.1 ORF_ID:all7375 YP_227677.1 ORF_ID:all7376 YP_227678.1 all7377; ORF_ID:all7377; probable acid phosphatase YP_227679.1 alr7378; ORF_ID:alr7378; unknown protein YP_227680.1 all7379; ORF_ID:all7379; unknown protein YP_227681.1 asr7380; ORF_ID:asr7380; similar to nuclease YP_227682.1 alr7381; ORF_ID:alr7381; putative nuclease YP_227683.1 all7382; ORF_ID:all7382; hypothetical protein YP_227684.1 alr7383; ORF_ID:alr7383; unknown protein YP_227685.1 alr7384; ORF_ID:alr7384; unknown protein YP_227686.1 ORF_ID:asr7385 YP_227687.1 ORF_ID:alr7386