-- dump date   	20240420_130727
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_010628.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001037.1.REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376)REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out underREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is putREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece.REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001037.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) NOTE: This genome has an insertion element which pops out under certain growth conditions. When it pops out, gene Npun_R0414 is put together in one piece. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length.
NC_010631.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001038.1.REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001038.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length.
NC_010632.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001039.1.REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001039.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length.
NC_010630.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001040.1.REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001040.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length.
NC_010633.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001041.1.REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001041.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length.
NC_010629.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001042.1.REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 2351359 Source DNA available from John C. Meeks (jcMeeks@ucdavis.edu) Bacteria available from ATCC: ATCC 29133 Contacts: John C. Meeks (jcMeeks@ucdavis.edu)           David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000020025.1-RS_2024_03_15 Annotation Date                   :: 03/15/2024 03:30:36 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 7,702 CDSs (total)                      :: 7,602 Genes (coding)                    :: 7,314 CDSs (with protein)               :: 7,314 Genes (RNA)                       :: 100 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 84 ncRNAs                            :: 4 Pseudo Genes (total)              :: 288 CDSs (without protein)            :: 288 Pseudo Genes (ambiguous residues) :: 0 of 288 Pseudo Genes (frameshifted)       :: 133 of 288 Pseudo Genes (incomplete)         :: 166 of 288 Pseudo Genes (internal stop)      :: 86 of 288 Pseudo Genes (multiple problems)  :: 85 of 288 CRISPR Arrays                     :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length.