-- dump date 20250217_001526 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP022579.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP022579.1.REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National TaiwanREFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan).REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeqREFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 11REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 2 of 11REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 2 of 11 Pseudo Genes (incomplete) :: 9 of 11REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 2 of 11 Pseudo Genes (incomplete) :: 9 of 11 Pseudo Genes (internal stop) :: 1 of 11REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 2 of 11 Pseudo Genes (incomplete) :: 9 of 11 Pseudo Genes (internal stop) :: 1 of 11 Pseudo Genes (multiple problems) :: 1 of 11REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 2 of 11 Pseudo Genes (incomplete) :: 9 of 11 Pseudo Genes (internal stop) :: 1 of 11 Pseudo Genes (multiple problems) :: 1 of 11 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP022579.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Chi-Te Liu (National Taiwan University, Taiwan). ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.10.1 Assembly Name :: oryzo1.03 Genome Coverage :: 861.2 Sequencing Technology :: PacBio; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_008274805.1-RS_2024_05_04 Annotation Date :: 05/04/2024 03:31:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,195 CDSs (total) :: 3,128 Genes (coding) :: 3,117 CDSs (with protein) :: 3,117 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 55 ncRNAs :: 3 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 2 of 11 Pseudo Genes (incomplete) :: 9 of 11 Pseudo Genes (internal stop) :: 1 of 11 Pseudo Genes (multiple problems) :: 1 of 11 ##Genome-Annotation-Data-END## COMPLETENESS: full length.