-- dump date 20140619_225055 -- class Genbank::CDS -- table cds_note -- id note YP_003008768.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_003008769.1 KEGG: baa:BA_0597 DNA polymerase III beta subunit; TIGRFAM: DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_003008770.1 TIGRFAM: S4 domain protein YaaA; KEGG: baa:BA_0598 hypothetical protein YP_003008771.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: baa:BA_0599 RecF protein YP_003008772.1 KEGG: bha:BH0005 hypothetical protein YP_003008773.1 KEGG: baa:BA_0600 TOP2c, topoisomeraseII; TIGRFAM: DNA gyrase subunit beta; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_003008774.1 KEGG: hypothetical protein YP_003008775.1 KEGG: bha:BH0007 DNA gyrase subunit A; TIGRFAM: DNA gyrase subunit alpha; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A YP_003008776.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bha:BH0008 hypothetical protein YP_003008778.1 KEGG: bha:BH0040 sigma-F transcribed protein YP_003008779.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bar:GBAA0026 lysine decarboxylase YP_003008780.1 KEGG: bha:BH0042 thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase YP_003008781.1 PFAM: protein of unknown function DUF970; KEGG: bha:BH0043 hypothetical protein YP_003008782.1 PFAM: protein of unknown function DUF327; KEGG: bha:BH1478 hypothetical protein YP_003008783.1 TIGRFAM: DNA polymerase III delta prime subunit; KEGG: bha:BH0044 DNA polymerase III subunit delta' YP_003008784.1 PFAM: PSP1 domain protein; KEGG: baa:BA_0620 hypothetical protein YP_003008785.1 PFAM: protein of unknown function DUF972; KEGG: baa:BA_0621 hypothetical protein YP_003008786.1 PFAM: methyltransferase small; KEGG: bsu:BSU00340 hypothetical protein YP_003008787.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bha:BH0049 hypothetical protein YP_003008788.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: baa:BA_0625 hypothetical protein YP_003008789.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bha:BH3818 hypothetical protein YP_003008790.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: baa:BA_0627 TatD related DNase YP_003008791.1 PFAM: 3D domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: bsu:BSU00400 hypothetical protein YP_003008792.1 KEGG: baa:BA_0628 the topoisomerase- primase domain- a nucleotidyl transferase/hydrolase domain; TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein YP_003008793.1 KEGG: bsu:BSU00420 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase YP_003008795.1 TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG; KEGG: bsu:BSU00430 hypothetical protein YP_003008796.1 PFAM: protein of unknown function DUF1021; KEGG: bha:BH0059 hypothetical protein YP_003008797.1 KEGG: bsu:BSU00450 small acid-soluble spore protein (alpha/beta-type SASP) YP_003008798.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: bsu:BSU00460 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_003008799.1 TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase; KEGG: bsu:BSU00470 pur operon repressor YP_003008800.1 TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: bha:BH0063 translation initiation inhibitor YP_003008801.1 PFAM: SpoVG family protein; KEGG: bha:BH0064 regulatory protein SpoVG YP_003008802.1 KEGG: bsu:BSU00500 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: nucleotidyl transferase; transferase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003008803.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: dol:Dole_2818 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 YP_003008804.1 KEGG: baa:BA_0639 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003008805.1 KEGG: bsu:BSU00540 hypothetical protein YP_003008806.1 KEGG: bsu:BSU00550 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase; TRCF domain protein; DEAD/DEAH box helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase YP_003008807.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bar:GBAA2336 peptidylprolyl isomerase YP_003008808.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: baa:BA_0873 Band_7, SPFH domain / band 7 family YP_003008809.1 KEGG: baa:BA_0872 hypothetical protein YP_003008810.1 TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: bha:BH0070 stage V sporulation protein T YP_003008811.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spe:Spro_3104 AraC family transcriptional regulator YP_003008812.1 PFAM: glycoside hydrolase family 4; KEGG: bha:BH2228 melibiase (alpha-galactosidase) YP_003008813.1 KEGG: swd:Swoo_2851 hypothetical protein YP_003008814.1 KEGG: tmz:Tmz1t_0151 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase YP_003008815.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: baa:BA_0644 tetrapyrrole (Corrin/Porphyrin) methylases YP_003008816.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: bsu:BSU22790 non-specific DNA-binding protein HBsu; signal recognition particle-like (SRP) component YP_003008817.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bsu:BSU00590 hypothetical protein YP_003008818.1 KEGG: sus:acid_4131 hypothetical protein YP_003008819.1 PFAM: protein of unknown function DUF817; KEGG: bar:GBAA3535 hypothetical protein YP_003008820.1 TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; KEGG: bha:BH0074 hypothetical protein YP_003008821.1 TIGRFAM: spore cortex biosynthesis protein YabQ; KEGG: bar:GBAA0058 hypothetical protein YP_003008822.1 PFAM: septum formation initiator; KEGG: baa:BA_0648 hypothetical protein YP_003008823.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: bar:GBAA0060 hypothetical protein YP_003008825.1 KEGG: bha:BH0078 stage II sporulation protein E; TIGRFAM: stage II sporulation protein E; PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_003008826.1 KEGG: bha:BH0079 hypothetical protein YP_003008827.1 SMART: serine/threonine protein kinase; KEGG: bha:BH0080 serine/threonine-protein kinase YP_003008828.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; ExsB family protein; KEGG: bsu:BSU00670 hypothetical protein YP_003008829.1 KEGG: bha:BH0084 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003008830.1 KEGG: baa:BA_0654 peptidase_M41, peptidase family M41; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003008831.1 PFAM: basic membrane lipoprotein; KEGG: bar:GBAA3927 Bmp family lipoprotein YP_003008832.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU31550 hypothetical protein YP_003008833.1 PFAM: inner-membrane translocator; KEGG: bsu:BSU31560 hypothetical protein YP_003008834.1 PFAM: inner-membrane translocator; KEGG: bsu:BSU31570 hypothetical protein YP_003008835.1 TIGRFAM: quinolinate synthetase complex, subunit alpha; PFAM: Quinolinate synthetase A; KEGG: pca:Pcar_0092 quinolinate synthetase YP_003008836.1 KEGG: aba:acid345_2250 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase YP_003008837.1 KEGG: glo:Glov_1316 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003008838.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: bha:BH0086 pantothenate kinase YP_003008839.1 PFAM: Hsp33 protein; KEGG: bsu:BSU00710 HSP33-like chaperonin YP_003008840.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bsu:BSU00720 hypothetical protein YP_003008841.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: bsu:BSU00730 cysteine synthetase A YP_003008842.1 PFAM: chorismate binding-like; anthranilate synthase component I domain protein; KEGG: baa:BA_0658 para-aminobenzoate synthetase component I YP_003008843.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase; KEGG: bha:BH0091 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II YP_003008844.1 PFAM: aminotransferase class IV; KEGG: baa:BA_0660 aminotransferase class IV YP_003008845.1 KEGG: bha:BH0093 dihydropteroate synthase (dihydropteroate pyrophosphorylase); TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003008846.1 KEGG: bsu:BSU00780 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_003008847.1 KEGG: bsu:BSU00790 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_003008848.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bha:BH0096 hypothetical protein YP_003008849.1 TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase; KEGG: bha:BH0097 nitrogen regulation transcriptional regulator YP_003008850.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: transcription elongation factor YP_003008851.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bsu:BSU00820 lysyl-tRNA synthetase YP_003008852.1 PFAM: glycosyl transferase family 39; KEGG: geo:Geob_0316 glycosyl transferase family 39 YP_003008853.1 PFAM: glycosyl transferase family 2; KEGG: geo:Geob_0317 glycosyl transferase family 2 YP_003008854.1 PFAM: GtrA family protein; KEGG: bsu:BSU18170 hypothetical protein YP_003008855.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2952 acetyltransferase YP_003008856.1 KEGG: bha:BH0020 inosine 5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein YP_003008857.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Penicillin-binding protein 5 domain protein; KEGG: baa:BA_0604 peptidase_S11, D-alanyl-D-alanine carboxypeptidase YP_003008858.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_003008859.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: bha:BH0023 glutamine amidotransferase subunit PdxT YP_003008860.1 KEGG: baa:BA_0607 tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_003008863.1 PFAM: small acid-soluble spore P family protein YP_003008865.1 PFAM: DSBA oxidoreductase; KEGG: gdj:Gdia_0941 DsbA oxidoreductase YP_003008866.1 KEGG: bsu:BSU03430 nuclease YP_003008867.1 PFAM: glycosyl transferase family 2; KEGG: cko:CKO_02892 hypothetical protein YP_003008868.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: yen:YE3253 DL-methionine transporter ATP-binding subunit YP_003008869.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dac:Daci_4597 binding-protein-dependent transport systems inner membrane component YP_003008870.1 KEGG: bar:GBAA2721 hypothetical protein YP_003008871.1 SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: swd:Swoo_3901 low molecular weight phosphotyrosine protein phosphatase YP_003008872.1 PFAM: beta-lactamase; KEGG: bar:GBAA2405 hydrolase YP_003008873.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: baa:BA_0612 dCMP_cyt_deam, cytidine and deoxycytidylate deaminase zinc-binding region YP_003008874.1 KEGG: bar:GBAA2636 sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003008875.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: pla:Plav_0855 hypothetical protein YP_003008876.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: vpa:VP0750 pseudouridine synthase family 1 protein YP_003008877.1 PFAM: OmpA/MotB domain protein; KEGG: bsu:BSU13680 flagellar motor protein MotB YP_003008878.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bsu:BSU13690 flagellar motor protein MotA YP_003008879.1 KEGG: bha:BH2997 hypothetical protein YP_003008880.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: bsu:BSU14090 hypothetical protein YP_003008881.1 PFAM: GCN5-related N-acetyltransferase; KEGG: baa:BA_2105 acetyltransferase (GNAT) family YP_003008882.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU10520 glucose/mannose:H+ symporter YP_003008883.1 PFAM: NLP/P60 protein; KEGG: gbm:Gbem_3368 NLP/P60 protein YP_003008885.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: scl:sce2422 metallopeptidase YP_003008886.1 KEGG: bar:GBAA5624 hypothetical protein YP_003008887.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bar:GBAA1789 RNA polymerase sigma factor SigW YP_003008889.1 KEGG: bar:GBAA1787 hypothetical protein YP_003008890.1 KEGG: bar:GBAA1786 lipoprotein YP_003008891.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mag:amb2384 peptidyl-prolyl cis-trans isomerase YP_003008892.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: mms:mma_2637 cytochrome o ubiquinol oxidase operon protein YP_003008893.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome C oxidase subunit III; KEGG: pfo:Pfl01_4646 cytochrome o ubiquinol oxidase subunit III YP_003008894.1 PFAM: cytochrome C oxidase subunit I; KEGG: bsu:BSU38160 cytochrome aa3 quinol oxidase (subunit I) YP_003008895.1 TIGRFAM: quinol oxidase AA3, subunit II; ubiquinol oxidase subunit II; PFAM: COX aromatic rich domain protein; cytochrome C oxidase subunit II; KEGG: sfr:Sfri_0224 ubiquinol oxidase subunit II YP_003008897.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: baa:BA_0478 transglycosylase YP_003008898.1 TIGRFAM: spermidine synthase; PFAM: Spermine synthase; KEGG: bsu:BSU37500 spermidine synthase YP_003008899.1 KEGG: azo:azo3603 hypothetical protein YP_003008900.1 PFAM: Domain of unknown function DUF1934 YP_003008901.1 KEGG: bha:BH3808 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_003008902.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bsu:BSU10300 serine alkaline protease (subtilisin E) YP_003008903.1 PFAM: DNA-directed RNA polymerase subunit delta; KEGG: baa:BA_0440 DNA-directed RNA polymerase subunit delta YP_003008904.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_003008905.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: baa:BA_0437 cheY-homologous receiver domain YP_003008906.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: bha:BH3784 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003008907.1 KEGG: bar:GBAA5575 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: Cold shock protein; ATPase AAA YP_003008908.1 PFAM: radical SAM protein; KEGG: gsu:GSU0886 radical SAM domain-containing protein YP_003008909.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: bsu:BSU37070 50S ribosomal protein L31 YP_003008911.1 KEGG: bha:BH0034 DNA polymerase III gamma and tau subunits; TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: ATPase AAA central domain protein; SMART: ATPase AAA YP_003008912.1 PFAM: conserved hypothetical protein; KEGG: bha:BH0035 hypothetical protein YP_003008913.1 KEGG: bha:BH0036 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein YP_003008916.1 PFAM: NADPH-dependent FMN reductase; KEGG: bha:BH3321 NADH-dependent FMN reductase YP_003008917.1 PFAM: glycosyl transferase family 4; KEGG: bsu:BSU35530 teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine) YP_003008918.1 KEGG: tmz:Tmz1t_0150 transcriptional regulator, CdaR YP_003008919.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: bha:BH1140 sugar ABC transportor ATP-binding protein YP_003008920.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bha:BH0620 RNA polymerase ECF-type sigma factor YP_003008921.1 KEGG: hypothetical protein YP_003008922.1 TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain protein; KEGG: baa:BA_0250 Hpr S kinase YP_003008923.1 TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: bsu:BSU34990 prolipoprotein diacylglyceryl transferase YP_003008924.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: baa:BA_0248 hydrolase, haloacid dehalogenase-like hydrolase YP_003008925.1 KEGG: bar:GBAA5389 transferase hexapeptide domain-containing protein YP_003008926.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_003008927.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_003008928.1 KEGG: bha:BH3582 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase YP_003008929.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_003008930.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_003008931.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: bha:BH3578 imidazole glycerol phosphate synthase subunit HisF YP_003008932.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase; KEGG: bha:BH3577 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein YP_003008933.1 KEGG: sun:SUN_0354 PHP family histidinol phosphatase/hydrolase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein YP_003008934.1 KEGG: bar:GBAA0049 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003008935.1 PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: bha:BH3572 hypothetical protein YP_003008936.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bba:Bd0373 hypothetical protein YP_003008937.1 TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: bar:GBAA4487 glucokinase YP_003008938.1 PFAM: conserved hypothetical protein; KEGG: bha:BH3569 hypothetical protein YP_003008939.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: bsu:BSU34760 hypothetical protein YP_003008940.1 PFAM: protein of unknown function DUF199; KEGG: bha:BH3567 hypothetical protein YP_003008941.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: bha:BH3566 phosphocarrier protein Chr YP_003008942.1 KEGG: bha:BH3564 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003008943.1 PFAM: sugar-binding domain protein; KEGG: bha:BH3561 transcriptional regulator YP_003008944.1 KEGG: bsu:BSU33940 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase YP_003008945.1 PFAM: phosphoglycerate kinase; KEGG: baa:BA_0226 phosphoglycerate kinase YP_003008946.1 TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: bha:BH3558 triosephosphate isomerase YP_003008947.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_003008948.1 KEGG: bha:BH3556 enolase (2-phosphoglycerate dehydratase); TIGRFAM: enolase; PFAM: enolase YP_003008949.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: bsu:BSU33630 preprotein translocase subunit SecG YP_003008950.1 KEGG: baa:BA_0194 RNB-like protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Cold shock protein YP_003008951.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bar:GBAA5115 cold shock protein CspD YP_003008952.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: bha:BH3552 SsrA-binding protein YP_003008956.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003008957.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003008958.1 PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL100259 substrate-binding component of ABC transporter YP_003008959.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2225 sugar transporter (permease) YP_003008960.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2224 maltose transporter (permease) YP_003008961.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein YP_003008962.1 KEGG: sfu:Sfum_3567 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003008963.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH2016 hypothetical protein YP_003008964.1 PFAM: S-layer domain protein; KEGG: lch:Lcho_3430 filamentous haemagglutinin outer membrane protein YP_003008965.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: hypothetical protein YP_003008966.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: rru:Rru_A0919 AraC family transcriptional regulator YP_003008967.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein YP_003008968.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1065 hypothetical protein YP_003008969.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1066 hypothetical protein YP_003008972.1 PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003008973.1 PFAM: transporter permease; KEGG: bar:GBAA3534 iron compound ABC transporter permease YP_003008974.1 PFAM: transporter permease; KEGG: bar:GBAA3533 iron compound ABC transporter permease YP_003008975.1 PFAM: periplasmic binding protein; KEGG: bar:GBAA3531 iron compound ABC transporter iron compound-binding protein YP_003008976.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU05310 hypothetical protein YP_003008977.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA3303 TetR family transcriptional regulator YP_003008978.1 TIGRFAM: N-carbamoylputrescine amidase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pst:PSPTO_5394 carbon-nitrogen hydrolase family protein YP_003008979.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: rce:RC1_1456 agmatine deiminase YP_003008980.1 KEGG: bar:GBAA4814 TetR family transcriptional regulator YP_003008981.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpt:Bpet1512 glucose 1-dehydrogenase YP_003008982.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: baa:BA_0894 haloacid dehalogenase-like hydrolase YP_003008983.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate YP_003008984.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: baa:BA_1868 bacterial regulatory proteins, DeoR family YP_003008985.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abb:ABBFA_002712 hypothetical protein YP_003008986.1 PFAM: methionine sulfoxide reductase A; KEGG: similar to AGAP012394-PA YP_003008987.1 PFAM: glycoside hydrolase family 76; carbohydrate binding family 6; Fibronectin type III domain protein; SMART: cellulose binding type IV; KEGG: hypothetical protein YP_003008988.1 KEGG: hypothetical protein; PFAM: glycoside hydrolase family 10; S-layer domain protein; carbohydrate-binding CenC domain protein; carbohydrate-binding family 9; SMART: glycoside hydrolase family 10 YP_003008989.1 PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH3482 multidrug-efflux transporter YP_003008990.1 PFAM: protein of unknown function DUF423; KEGG: nmu:Nmul_A1031 hypothetical protein YP_003008991.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reu:Reut_B5647 glyoxalase/bleomycin resistance protein/dioxygenase YP_003008992.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bar:GBAA3205 AsnC family transcriptional regulator YP_003008993.1 KEGG: bbt:BBta_6235 hypothetical protein YP_003008994.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: vvy:VV1113 hypothetical protein YP_003008995.1 PFAM: glycoside hydrolase; KEGG: pin:Ping_2107 glycoside hydrolase family 3 protein YP_003008996.1 PFAM: SEC-C motif domain protein; KEGG: dvm:DvMF_2873 preprotein translocase subunit SecA YP_003008997.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bha:BH3915 methyl-accepting chemotaxis protein YP_003008998.1 KEGG: mxa:MXAN_0074 hypothetical protein YP_003008999.1 KEGG: jan:Jann_2302 hypothetical protein YP_003009000.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA5454 LysR family transcriptional regulator YP_003009001.1 PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA3345 major facilitator family transporter YP_003009002.1 PFAM: helix-turn-helix HxlR type; KEGG: bsu:BSU05290 hypothetical protein YP_003009003.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bsu:BSU33540 azoreductase YP_003009004.1 PFAM: helix-turn-helix HxlR type; KEGG: bha:BH1009 hypothetical protein YP_003009005.1 PFAM: DoxX family protein; KEGG: bbt:BBta_2759 hypothetical protein YP_003009006.1 PFAM: protein of unknown function DUF302; KEGG: aca:ACP_1217 hypothetical protein YP_003009007.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: tgr:Tgr7_3076 transcriptional regulator YP_003009008.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2828 acetyltransferase YP_003009009.1 KEGG: cak:Caul_2305 integral membrane protein YP_003009010.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA4920 DNA-binding response regulator YP_003009011.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bar:GBAA4921 sensor histidine kinase YP_003009012.1 PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: pat:Patl_0128 glycoside hydrolase family protein YP_003009014.1 PFAM: glycosyl transferase family 2; KEGG: aba:acid345_2211 glycosyl transferase, family 2 YP_003009015.1 PFAM: protein of unknown function DUF205; KEGG: dde:Dde_0172 acyl-phosphate glycerol-3-phosphate acyltransferase YP_003009016.1 KEGG: gur:Gura_3425 BNR repeat-containing glycosyl hydrolase YP_003009017.1 KEGG: hypothetical protein YP_003009018.1 PFAM: cellulosome anchoring protein cohesin region; S-layer domain protein; KEGG: hypothetical protein YP_003009019.1 PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: baa:BA_1663 HTH_ARAC, helix_turn_helix, arabinose operon control protein YP_003009020.1 PFAM: aldo/keto reductase; KEGG: bha:BH3927 aryl-alcohol dehydrogenase YP_003009021.1 PFAM: patatin; KEGG: baa:BA_1330 uncharacterized protein family UPF0028 YP_003009022.1 PFAM: Fibronectin-binding family protein; KEGG: baa:BA_2345 hypothetical protein YP_003009023.1 KEGG: bha:BH1782 hypothetical protein YP_003009025.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: spe:Spro_3106 hypothetical protein YP_003009026.1 KEGG: abb:ABBFA_002698 hypothetical protein YP_003009028.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: baa:BA_1496 oligopeptide transporter ATP-binding protein YP_003009029.1 KEGG: baa:BA_1731 oligopeptide transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003009030.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA0910 oligopeptide ABC transporter permease protein YP_003009031.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: baa:BA_1492 peptide transporter permease protein YP_003009032.1 PFAM: extracellular solute-binding protein family 5; KEGG: bar:GBAA0908 oligopeptide ABC transporter oligopeptide-binding protein YP_003009033.1 KEGG: bsu:BSU35640 membrane bound lipoprotein YP_003009035.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003009036.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003009037.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003009038.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0481 ABC transporter (permiase) YP_003009039.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU30160 hypothetical protein YP_003009040.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bha:BH2087 hypothetical protein YP_003009041.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH2086 ArsR family transcriptional regulator YP_003009042.1 KEGG: bha:BH2085 hypothetical protein YP_003009044.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003009045.1 PFAM: amidase; cellulosome anchoring protein cohesin region; KEGG: reu:Reut_B5142 amidase YP_003009046.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: baa:BA_1541 NADHdh_2, NAD(P)H dehydrogenase (quinone) YP_003009047.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: baa:BA_1542 uncharacterized protein family UPF0074 YP_003009048.1 KEGG: sus:acid_4718 hypothetical protein YP_003009049.1 PFAM: hypothetical protein; KEGG: gur:Gura_3521 helix-turn-helix, type 11 domain-containing protein YP_003009050.1 KEGG: pmy:Pmen_3081 hypothetical protein YP_003009051.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b20158 ABC transporter periplasmic substrate-binding protein YP_003009052.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: smd:Smed_3963 binding-protein-dependent transport systems inner membrane component YP_003009053.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mlo:mlr8490 ABC transporter ATP-binding protein YP_003009054.1 PFAM: PHP domain protein; KEGG: dal:Dalk_4877 PHP domain protein YP_003009055.1 PFAM: sugar isomerase (SIS); KEGG: bpy:Bphyt_3133 RpiR family transcriptional regulator YP_003009056.1 KEGG: sei:SPC_4629 hypothetical protein YP_003009058.1 KEGG: seg:SG2021 hypothetical protein YP_003009059.1 KEGG: sec:SC4351 hypothetical protein YP_003009060.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: dat:HRM2_39670 RecQ1 YP_003009061.1 PFAM: NUDIX hydrolase; KEGG: bba:Bd2220 MutT/NUDIX family hydrolase/pyrophosphatase YP_003009062.1 KEGG: pmr:PMI3507 hypothetical protein YP_003009063.1 SMART: glycosyl hydrolase family 98 carbohydrate binding module; KEGG: slo:Shew_2289 glycosy hydrolase family protein YP_003009064.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:acid_5559 alpha-L-rhamnosidase YP_003009065.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: pst:PSPTO_4788 RNA 2'-phosphotransferase YP_003009066.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: xac:XAC0313 type V secretory pathway protein YP_003009068.1 KEGG: aba:acid345_3456 hypothetical protein YP_003009069.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bar:GBAA2422 cold shock protein CspA YP_003009070.1 KEGG: bar:GBAA2421 hypothetical protein YP_003009072.1 KEGG: bha:BH2961 hypothetical protein YP_003009073.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU03700 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003009074.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vco:VC0395_A1224 LysR family transcriptional regulator YP_003009075.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B5463 short-chain dehydrogenase/reductase SDR YP_003009076.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bov:BOV_1080 short chain dehydrogenase/reductase family oxidoreductase YP_003009078.1 PFAM: YibE/F family protein; KEGG: sse:Ssed_2695 hypothetical protein YP_003009079.1 KEGG: pat:Patl_2791 hypothetical protein YP_003009080.1 PFAM: metallophosphoesterase; Ig domain protein; KEGG: afw:Anae109_3838 metallophosphoesterase YP_003009081.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003009082.1 PFAM: copper amine oxidase domain protein; KEGG: sfu:Sfum_1249 hypothetical protein YP_003009083.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003009084.1 PFAM: glycoside hydrolase; KEGG: sal:Sala_1014 glycoside hydrolase family protein YP_003009085.1 KEGG: bsu:BSU04320 hypothetical protein YP_003009086.1 PFAM: MMPL domain protein; KEGG: bar:GBAA2407 MmpL family membrane protein YP_003009087.1 PFAM: regulatory protein TetR; KEGG: afr:AFE_0255 TetR family transcriptional regulator YP_003009088.1 PFAM: aldo/keto reductase; KEGG: baa:BA_0777 aldo_ket_red, aldo/keto reductase family YP_003009089.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bsu:BSU29040 hypothetical protein YP_003009090.1 PFAM: helix-turn-helix HxlR type; KEGG: bsu:BSU29030 hypothetical protein YP_003009091.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: bar:GBAA3601 hypothetical protein YP_003009093.1 PFAM: ATPase AAA; peptidase M41; SMART: ATPase AAA; KEGG: gdj:Gdia_1207 ATP-dependent metalloprotease FtsH YP_003009094.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pmy:Pmen_0263 HAD family hydrolase YP_003009095.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: pae:PA1950 ribokinase YP_003009096.1 PFAM: polysaccharide deacetylase; KEGG: bar:GBAA3679 polysaccharide deacetylase YP_003009099.1 PFAM: GntR family transcriptional regulator; GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: rsq:Rsph17025_3255 short-chain dehydrogenase/reductase SDR YP_003009100.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate YP_003009101.1 Converts D-mannonate to D-mannuronate YP_003009102.1 PFAM: aldo/keto reductase; KEGG: scl:sce5048 oxidoreductase YP_003009104.1 KEGG: bha:BH1706 polar chromosome segregation protein YP_003009105.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: bsu:BSU29990 hypothetical protein YP_003009106.1 involved in assembly of spore coat proteins such as GerQ by catalyzing epsilon-(gamma-glutamyl)lysine cross links YP_003009107.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_CH02597 AraC family transcriptional regulator YP_003009108.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: bha:BH2165 hypothetical protein YP_003009109.1 PFAM: xylose isomerase; KEGG: sus:acid_4909 xylose isomerase domain-containing protein YP_003009111.1 PFAM: protein of unknown function DUF191; KEGG: bha:BH2689 hypothetical protein YP_003009112.1 PFAM: purine or other phosphorylase family 1; KEGG: bha:BH2690 hypothetical protein YP_003009114.1 KEGG: bar:GBAA3427 hypothetical protein YP_003009115.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; aminoglycoside phosphotransferase; KEGG: ott:OTT_0547 streptomycin-6-phosphotransferase YP_003009116.1 PFAM: regulatory protein TetR; KEGG: cti:RALTA_A2979 TetR family transcriptional regulator YP_003009117.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS03124 transmembrane efflux transmembrane protein YP_003009118.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bsu:BSU36260 hypothetical protein YP_003009119.1 TIGRFAM: capsular exopolysaccharide family; KEGG: bha:BH3668 capsular polysaccharide biosynthesis YP_003009120.1 PFAM: polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: bha:BH3718 capsular polysaccharide biosynthesis YP_003009121.1 PFAM: polysaccharide biosynthesis protein; KEGG: mlo:mlr6757 exopolysaccharide biosynthesis protein YP_003009122.1 PFAM: polysaccharide pyruvyl transferase; KEGG: mes:Meso_2576 polysaccharide pyruvyl transferase YP_003009123.1 PFAM: glycosyl transferase group 1; KEGG: ank:AnaeK_4421 glycosyl transferase group 1 YP_003009125.1 KEGG: rlt:Rleg2_5291 transferase hexapeptide repeat containing protein YP_003009126.1 PFAM: glycosyl transferase group 1; KEGG: maq:Maqu_2615 glycosyl transferase, group 1 YP_003009127.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: sat:SYN_01112 UDP-N-acetylglucosamine 4-epimerase YP_003009128.1 PFAM: sugar transferase; glycosyl transferase group 1; KEGG: dde:Dde_0362 sugar transferase involved in lipopolysaccharide synthesis-like YP_003009129.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: bsu:BSU34240 hypothetical protein YP_003009130.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: lpc:LPC_2537 pyridoxal phosphate-dependent enzyme YP_003009131.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: bha:BH3652 UTP-glucose-1-phosphate uridylyltransferase YP_003009132.1 KEGG: bsu:BSU35580 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003009133.1 PFAM: Collagen triple helix repeat; KEGG: bba:Bd2932 hypothetical protein YP_003009134.1 PFAM: GCN5-related N-acetyltransferase; KEGG: saz:Sama_2775 acetyltransferase YP_003009136.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bha:BH0620 RNA polymerase ECF-type sigma factor YP_003009137.1 KEGG: hypothetical protein YP_003009139.1 PFAM: alpha/beta hydrolase fold; KEGG: mlo:mll2481 beta-ketoadipate enol-lactone hydrolase YP_003009140.1 PFAM: regulatory protein AsnC/Lrp family; regulatory protein MarR; SMART: regulatory protein AsnC/Lrp family; KEGG: bar:GBAA3205 AsnC family transcriptional regulator YP_003009141.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bar:GBAA2768 thioredoxin reductase YP_003009143.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bar:GBAA1756 cation efflux family protein YP_003009144.1 PFAM: protein of unknown function DUF1696; KEGG: bar:GBAA4710 hypothetical protein YP_003009145.1 PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH2592 hypothetical protein YP_003009146.1 PFAM: alpha/beta hydrolase fold; KEGG: bsu:BSU10900 hypothetical protein YP_003009147.1 KEGG: smt:Smal_3677 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein YP_003009148.1 PFAM: transporter permease; KEGG: bsu:BSU07500 hypothetical protein YP_003009149.1 PFAM: transporter permease; KEGG: bsu:BSU07510 hypothetical protein YP_003009150.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU07520 hypothetical protein YP_003009151.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003009152.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rlt:Rleg2_4664 binding-protein-dependent transport systems inner membrane component YP_003009153.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: vei:Veis_4548 binding-protein-dependent transport systems inner membrane component YP_003009154.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003009155.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH1123 hypothetical protein YP_003009156.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3680 sugar ABC transporter (sugar-binding protein) YP_003009157.1 PFAM: glycoside hydrolase clan GH-D; KEGG: hypothetical protein YP_003009160.1 KEGG: bha:BH3013 general stress protein YP_003009161.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: hsm:HSM_1574 spermidine/putrescine ABC transporter ATPase YP_003009162.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: lpf:lpl1147 hypothetical protein YP_003009163.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dat:HRM2_13760 PotC2 YP_003009164.1 PFAM: extracellular solute-binding protein family 1; KEGG: pcr:Pcryo_2162 extracellular solute-binding protein YP_003009165.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003009166.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bha:BH3669 capsular polysaccharide biosynthesis YP_003009167.1 TIGRFAM: capsular exopolysaccharide family; KEGG: bha:BH3668 capsular polysaccharide biosynthesis YP_003009168.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: bha:BH3717 UTP-glucose-1-phosphate uridylyltransferase YP_003009169.1 PFAM: sugar transferase; KEGG: shn:Shewana3_2005 WecB/TagA/CpsF family glycosyl transferase YP_003009170.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gsu:GSU0627 GDP-fucose synthetase YP_003009171.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mno:Mnod_6329 GDP-mannose 4,6-dehydratase YP_003009172.1 PFAM: glycosyl transferase group 1; KEGG: gme:Gmet_1502 glycosyl transferase, group 1 YP_003009173.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rec:RHECIAT_CH0000844 fusion protein: glycosyltransferase and acetyltransferase YP_003009174.1 PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_4435 glycosyl transferase group 1 YP_003009175.1 PFAM: glycosyl transferase family 2; KEGG: bha:BH3713 glycosyltransferase YP_003009176.1 KEGG: pmr:PMI3192 O antigen polysaccharide unit polymerase YP_003009177.1 PFAM: nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II; KEGG: mch:Mchl_5260 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_003009178.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: apj:APJL_1491 flippase Wzx YP_003009179.1 KEGG: dps:DPPB74 glycosyltransferase YP_003009180.1 KEGG: Os06g0702500; hypothetical protein YP_003009181.1 KEGG: bsu:BSU35580 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003009182.1 KEGG: unc-89; UNCoordinated YP_003009183.1 PFAM: copper amine oxidase domain protein YP_003009185.1 PFAM: VanZ family protein; KEGG: baa:BA_0336 hypothetical protein YP_003009186.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_003009187.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003009189.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bha:BH2936 hypothetical protein YP_003009190.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: sil:SPO2638 translation initiation factor IF-3 YP_003009191.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: baa:BA_0268 ABC transporter YP_003009192.1 PFAM: UbiA prenyltransferase; KEGG: noc:Noc_1948 UbiA prenyltransferase YP_003009193.1 KEGG: cvi:CV_0751 hypothetical protein YP_003009194.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: pnu:Pnuc_0330 acid phosphatase/vanadium-dependent haloperoxidase related YP_003009197.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003009198.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003009199.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein YP_003009200.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1065 hypothetical protein YP_003009201.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1066 hypothetical protein YP_003009202.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein YP_003009203.1 PFAM: protein of unknown function DUF985; KEGG: mno:Mnod_0449 protein of unknown function DUF985 YP_003009204.1 PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA0787 major facilitator family transporter YP_003009205.1 PFAM: 5'-nucleotidase; peptidoglycan-binding LysM; metallophosphoesterase; SMART: peptidoglycan-binding LysM; KEGG: bha:BH0026 nucleotidase precursor YP_003009206.1 PFAM: sugar-binding domain protein; KEGG: baa:BA_2393 helix_turn_helix, cAMP Regulatory protein YP_003009207.1 KEGG: bar:GBAA1892 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_003009208.1 PFAM: sulfate transporter; xanthine/uracil/vitamin C permease; KEGG: bha:BH0414 sulfate permease YP_003009210.1 PFAM: aldose 1-epimerase; KEGG: scl:sce1454 galactose mutarotase YP_003009211.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: glo:Glov_0699 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003009212.1 KEGG: pag:PLES_36021 integral membrane sensor domain; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003009213.1 KEGG: sfu:Sfum_3292 response regulator receiver modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003009214.1 PFAM: aldo/keto reductase; KEGG: yen:YE1221 ion channel protein YP_003009215.1 PFAM: protein of unknown function UPF0157; KEGG: cbd:CBUD_1699 glutamate-rich protein YP_003009216.1 KEGG: dat:HRM2_43550 two-component system sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; Hpt domain protein; response regulator receiver; hypothetical protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein YP_003009217.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sml:Smlt0594 two-component response regulator transcriptional regulatory protein YP_003009218.1 PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: gsu:GSU0537 sensory box/GGDEF family protein YP_003009220.1 KEGG: hypothetical protein LOC724814 YP_003009221.1 PFAM: protein of unknown function RIO1; SMART: serine/threonine protein kinase; KEGG: bar:GBAA2307 protein kinase domain-containing protein YP_003009223.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: rpa:RPA0225 superoxide dismutase (Cu/Zn) YP_003009225.1 PFAM: NUDIX hydrolase; KEGG: bha:BH0986 hypothetical protein YP_003009226.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: gme:Gmet_2522 large-conductance mechanosensitive channel YP_003009227.1 PFAM: SpoOM family protein; KEGG: bar:GBAA2308 sporulation-control protein Spo0M YP_003009228.1 PFAM: protein of unknown function DUF939; KEGG: bar:GBAA0529 lipoprotein YP_003009231.1 PFAM: hypothetical protein; KEGG: bsu:BSU10480 hypothetical protein YP_003009232.1 PFAM: major facilitator superfamily MFS_1; KEGG: pmr:PMI1687 multidrug resistance protein (MFS-family transporter) YP_003009233.1 processive; catalyzes the formation of mono-, di- and tri-glucosyldiacylglycerol by the progressive transfer of glucosyl residues to diacylglycerol; involved in the formation of membrane glycolipids YP_003009234.1 PFAM: aldo/keto reductase; KEGG: bsu:BSU26850 hypothetical protein YP_003009235.1 TIGRFAM: threonine dehydratase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; threonine dehydratase domain protein; KEGG: bha:BH1711 threonine dehydratase YP_003009237.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bha:BH2313 transcriptional regulator YP_003009238.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bha:BH2313 transcriptional regulator YP_003009239.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003009240.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0481 ABC transporter (permiase) YP_003009241.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003009242.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sde:Sde_2632 HflK YP_003009243.1 PFAM: glycoside hydrolase family 30; KEGG: rfr:Rfer_1106 glycoside hydrolase family protein YP_003009244.1 PFAM: glycoside hydrolase family 30; KEGG: sde:Sde_2992 helix-turn-helix, AraC type YP_003009245.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase YP_003009246.1 PFAM: AraC-type transcriptional regulator; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pap:PSPA7_3240 transcriptional regulator YP_003009249.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: baa:BA_1918 flavodoxin YP_003009250.1 KEGG: baa:BA_1919 hypothetical protein YP_003009251.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003009252.1 PFAM: protein of unknown function DUF159; KEGG: bsu:BSU20490 hypothetical protein YP_003009253.1 PFAM: electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein subunit alpha; KEGG: bha:BH3099 electron transfer flavoprotein (subunit alpha) YP_003009254.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: bar:GBAA4760 electron transfer flavoprotein, beta subunit YP_003009255.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bha:BH3802 iron-sulphur-binding reductase YP_003009256.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase; KEGG: bsu:BSU32840 hypothetical protein YP_003009257.1 KEGG: bha:BH3487 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase YP_003009258.1 PFAM: acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 domain; KEGG: bha:BH3486 butyryl-CoA dehydrogenase YP_003009259.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bha:BH3104 long-chain fatty-acid-CoA ligase YP_003009260.1 PFAM: thioesterase superfamily protein; KEGG: ppd:Ppro_1137 hypothetical protein YP_003009263.1 KEGG: queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase YP_003009264.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bsu:BSU40410 hypothetical protein YP_003009265.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gme:Gmet_2694 PAS/PAC sensor signal transduction histidine kinase YP_003009266.1 PFAM: oxidoreductase molybdopterin binding; KEGG: rce:RC1_3170 oxidoreductase molybdopterin binding domain protein YP_003009267.1 PFAM: Collagen triple helix repeat; KEGG: collagen_XVIII; collagen XVIII homologue YP_003009268.1 KEGG: tcx:Tcr_1353 hypothetical protein YP_003009269.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: scl:sce8899 DNA-binding protein YP_003009270.1 KEGG: mmr:Mmar10_0510 hypothetical protein YP_003009271.1 KEGG: hypothetical protein YP_003009272.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: baa:BA_2117 rhodanese homology domain YP_003009274.1 KEGG: ajs:Ajs_2947 ATPase involved in chromosome partitioning-like protein YP_003009277.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: similar to Y105C5B.9 YP_003009278.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl01_3555 AraC family transcriptional regulator YP_003009279.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: psa:PST_1131 probable oxidoreductase YP_003009280.1 KEGG: bar:GBAA0860 hypothetical protein YP_003009281.1 KEGG: hypothetical protein YP_003009282.1 KEGG: hypothetical protein YP_003009283.1 KEGG: reu:Reut_C6029 cellulose synthase (UDP-forming) YP_003009284.1 KEGG: bte:BTH_I2402 glycosy hydrolase family protein; PFAM: carbohydrate-binding family V/XII; SMART: carbohydrate-binding family V/XII YP_003009285.1 KEGG: aca:ACP_1144 hypothetical protein YP_003009286.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU07100 lipoprotein YP_003009287.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0481 ABC transporter (permiase) YP_003009288.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, multiple sugar transporter permease YP_003009289.1 PFAM: GntR family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bsu:BSU33970 LacI family transcription regulator YP_003009290.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: sus:acid_6613 glucose-methanol-choline oxidoreductase YP_003009291.1 PFAM: YCII-related; KEGG: ara:Arad_3753 hypothetical protein YP_003009292.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: ara:Arad_3754 RNA polymerase sigma factor protein YP_003009293.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ect:ECIAI39_4283 DNA-binding transcriptional regulator YP_003009294.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: hypothetical protein YP_003009295.1 PFAM: amidase; S-layer domain protein; KEGG: smt:Smal_0786 amidase YP_003009297.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sfu:Sfum_1327 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003009299.1 PFAM: metallophosphoesterase; KEGG: hypothetical protein YP_003009300.1 PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU05170 hypothetical protein YP_003009301.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bar:GBAA0575 methyl-accepting chemotaxis protein YP_003009302.1 PFAM: protein of unknown function DUF1304; KEGG: scl:sce9310 hypothetical protein YP_003009303.1 PFAM: S-layer domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: gur:Gura_2022 fibronectin, type III domain-containing protein YP_003009304.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: sus:acid_3765 response regulator receiver protein YP_003009305.1 PFAM: glycosyl transferase family 4; KEGG: bsu:BSU35530 teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine) YP_003009306.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: smt:Smal_3818 DeoR family transcriptional regulator YP_003009307.1 PFAM: small multidrug resistance protein; protein of unknown function DUF6 transmembrane; KEGG: gur:Gura_1643 hypothetical protein YP_003009308.1 PFAM: metallophosphoesterase; KEGG: baa:BA_1401 PA_phosphatase, purple acid phosphatase YP_003009309.1 PFAM: protein of unknown function LppY and LpqO; KEGG: bid:Bind_2102 protein of unknown function LppY and LpqO YP_003009310.1 PFAM: protein of unknown function LppY and LpqO; KEGG: mno:Mnod_7991 protein of unknown function LppY and LpqO YP_003009311.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bsu:BSU03550 hypothetical protein YP_003009312.1 PFAM: GntR family transcriptional regulator; aminotransferase class I and II; SMART: GntR family transcriptional regulator; KEGG: hypothetical protein YP_003009313.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003009314.1 PFAM: sulfatase; KEGG: bcs:BCAN_B1216 arylsulfatase D precursor YP_003009315.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pin:Ping_2763 MscS mechanosensitive ion channel YP_003009316.1 PFAM: GCN5-related N-acetyltransferase; KEGG: slo:Shew_1744 GCN5-related N-acetyltransferase YP_003009317.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: hypothetical protein YP_003009318.1 PFAM: alpha/beta hydrolase; KEGG: reu:Reut_B5462 esterase/lipase/thioesterase YP_003009319.1 PFAM: helix-turn-helix HxlR type; KEGG: geo:Geob_0974 HxlR family transcriptional regulator YP_003009320.1 PFAM: hypothetical protein; KEGG: bsu:BSU19100 hypothetical protein YP_003009321.1 PFAM: DinB family protein; KEGG: bha:BH3115 nuclease inhibitor YP_003009322.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bar:GBAA0176 alcohol dehydrogenase, zinc-containing YP_003009323.1 TIGRFAM: urea ABC transporter urea binding protein; PFAM: extracellular ligand-binding receptor; KEGG: bha:BH0251 ABC transporter (substrate-binding protein) YP_003009324.1 TIGRFAM: urea ABC transporter permease UrtB; PFAM: inner-membrane translocator; KEGG: bha:BH0250 ABC transporter (permease) YP_003009325.1 TIGRFAM: urea ABC transporter permease UrtC; PFAM: inner-membrane translocator; KEGG: bha:BH0249 ABC transporter (permease) YP_003009326.1 TIGRFAM: urea ABC transporter ATP-binding protein UrtD; PFAM: ABC transporter; KEGG: mgm:Mmc1_1022 ABC transporter related YP_003009327.1 KEGG: bha:BH0247 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: ATPase AAA YP_003009328.1 TIGRFAM: ATP binding protein; PFAM: protein of unknown function DUF71 ATP-binding region; KEGG: abb:ABBFA_000903 MJ0570-related uncharacterized domain protein YP_003009329.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sml:Smlt3250 sugar transporter permease protein YP_003009330.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mca:MCA1942 sugar ABC transporter permease YP_003009331.1 PFAM: extracellular solute-binding protein family 1; KEGG: smt:Smal_2683 extracellular solute-binding protein family 1 YP_003009332.1 KEGG: ypp:YPDSF_0395 hypothetical protein YP_003009333.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ypg:YpAngola_A1069 LacI family sugar-binding transcriptional regulator YP_003009335.1 PFAM: protein of unknown function DUF155; KEGG: gur:Gura_1501 hypothetical protein YP_003009336.1 KEGG: bar:GBAA4459 prolyl 4-hydroxylase alpha subunit; PFAM: 2OG-Fe(II) oxygenase; SMART: prolyl 4-hydroxylase subunit alpha YP_003009338.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: baa:BA_0537 ABC_tran, ABC transporter YP_003009339.1 KEGG: vha:VIBHAR_00463 protoporphyrinogen oxidase YP_003009340.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU03080 hypothetical protein YP_003009341.1 KEGG: baa:BA_0308 hypothetical protein YP_003009342.1 KEGG: sus:acid_5587 hypothetical protein YP_003009344.1 PFAM: glycosyl transferase family 2; KEGG: bsu:BSU04300 hypothetical protein YP_003009345.1 PFAM: cellulose synthase subunit B; KEGG: vfi:VF_A0883 cellulose synthase regulator protein YP_003009346.1 KEGG: sfr:Sfri_0198 diguanylate cyclase YP_003009347.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: bar:GBAA4666 prephenate dehydratase YP_003009348.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bar:GBAA3358 quinone family NAD(P)H dehydrogenase YP_003009349.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: xac:XAC1455 MarR family transcriptional regulator YP_003009350.1 KEGG: bar:GBAA2688 hypothetical protein YP_003009351.1 PFAM: sulfatase; KEGG: noc:Noc_0194 arylsulfatase A and related enzyme YP_003009353.1 PFAM: sodium/hydrogen exchanger; KEGG: bsu:BSU09850 hypothetical protein YP_003009354.1 PFAM: TrkA-C domain protein; KEGG: bsu:BSU09860 hypothetical protein YP_003009356.1 PFAM: HPP family protein; KEGG: baa:BA_1528 hypothetical protein YP_003009357.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU18420 hypothetical protein YP_003009358.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rpa:RPA3631 glucose dehydrogenase YP_003009359.1 PFAM: regulatory protein TetR; KEGG: bpt:Bpet1592 TetR family transcriptional regulator YP_003009360.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dal:Dalk_1623 MarR family transcriptional regulator YP_003009361.1 KEGG: dia:Dtpsy_3316 3-demethylubiquinone-9 3-methyltransferase YP_003009362.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003009363.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: similar to regucalcin YP_003009364.1 KEGG: pen:PSEEN3120 carbonate dehydratase YP_003009366.1 PFAM: radical SAM protein; KEGG: aba:acid345_2134 Fe-S protein, radical SAM family YP_003009367.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: aba:acid345_2135 prolipoprotein diacylglyceryl transferase YP_003009368.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: baa:BA_2351 adh_short, short chain dehydrogenase YP_003009369.1 PFAM: X-Pro dipeptidyl-peptidase; peptidase S15; KEGG: sus:acid_2013 X-Pro dipeptidyl-peptidase domain-containing protein YP_003009370.1 PFAM: peptidase M19 renal dipeptidase; KEGG: sme:SMc03264 dipeptidase protein YP_003009371.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: sus:acid_2302 ornithine cyclodeaminase YP_003009372.1 KEGG: bpy:Bphyt_0233 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003009373.1 KEGG: hypothetical protein YP_003009374.1 PFAM: ApbE family lipoprotein; KEGG: par:Psyc_2080 ApbE family lipoprotein YP_003009375.1 KEGG: par:Psyc_2081 hypothetical protein YP_003009377.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bha:BH2712 LysR family transcriptional regulator YP_003009378.1 KEGG: vsp:VS_1642 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_003009379.1 KEGG: bar:GBAA2452 hypothetical protein YP_003009380.1 TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; KEGG: bha:BH2053 acid-soluble spore protein H YP_003009381.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dat:HRM2_13600 hypothetical protein YP_003009382.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sat:SYN_03611 GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_003009383.1 PFAM: APHP domain protein; carbohydrate binding family 6; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; Parallel beta-helix repeat; KEGG: similar to syntaxin binding protein YP_003009384.1 KEGG: ccv:CCV52592_1992 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003009385.1 PFAM: cation transporter; KEGG: baa:BA_1856 sodium transporter YP_003009386.1 KEGG: bar:GBAA3394 protein-tyrosine phosphatase-like protein YP_003009387.1 PFAM: protein of unknown function UPF0061; KEGG: bha:BH3939 hypothetical protein YP_003009388.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003009390.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bar:GBAA2571 hypothetical protein YP_003009391.1 PFAM: Chromate transporter; KEGG: bha:BH0870 chromate transporter YP_003009392.1 PFAM: Chromate transporter; KEGG: pin:Ping_2327 chromate transporter chromate ion transporter (CHR) family protein YP_003009393.1 PFAM: ROK family protein; KEGG: bha:BH1094 transcriptional repressor of the xylose operon YP_003009394.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: gur:Gura_3003 YVTN beta-propeller repeat-containing protein YP_003009395.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce6750 ABC transporter ATP-binding protein YP_003009396.1 PFAM: protein of unknown function DUF990; KEGG: baa:BA_1105 ABC-2 type transporter permease YP_003009397.1 PFAM: protein of unknown function DUF990; KEGG: rle:RL2976 transmembrane component of ABC transporter YP_003009399.1 PFAM: NUDIX hydrolase; KEGG: swp:swp_3593 MutT/NUDIX family protein YP_003009400.1 PFAM: glutathione peroxidase; KEGG: bar:GBAA2119 glutathione peroxidase YP_003009402.1 PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: bar:GBAA3501 lysozyme YP_003009403.1 PFAM: ThiJ/PfpI domain protein; KEGG: mms:mma_0345 ThiJ/PfpI family protein YP_003009404.1 PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3506 AraC/XylS family transcriptional regulator YP_003009405.1 PFAM: transcriptional regulator PadR family protein; KEGG: baa:BA_1551 MarR family YP_003009406.1 KEGG: baa:BA_1552 hypothetical protein YP_003009407.1 PFAM: aldo/keto reductase; KEGG: bha:BH1011 oxidoreductase YP_003009408.1 PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce5395 aminoglycoside phosphotransferase YP_003009409.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sus:acid_1603 LuxR family transcriptional regulator YP_003009410.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sus:acid_0392 integral membrane sensor signal transduction histidine kinase YP_003009411.1 PFAM: extracellular solute-binding protein family 1; KEGG: rlt:Rleg2_5331 extracellular solute-binding protein family 1 YP_003009412.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_7347 ABC transporter membrane spanning protein (sugar) YP_003009413.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rle:pRL120663 permease of ABC transporter YP_003009414.1 PFAM: sulfatase; KEGG: ses:SARI_01155 hypothetical protein YP_003009415.1 PFAM: glycosyl hydrolase family 88; KEGG: bha:BH2054 unsaturated glucuronyl hydrolase YP_003009416.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vfi:VF_A0115 acetyltransferase YP_003009417.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dal:Dalk_2496 GCN5-related N-acetyltransferase YP_003009418.1 PFAM: aldo/keto reductase; KEGG: mlo:mlr6441 oxidoreductase YP_003009419.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: bha:BH3843 oxidoreductase YP_003009420.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cps:CPS_0659 AraC family transcriptional regulator YP_003009421.1 KEGG: bba:Bd3673 hypothetical protein YP_003009422.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU39610 hypothetical protein YP_003009423.1 PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003009424.1 KEGG: gsu:GSU0049 hypothetical protein YP_003009427.1 KEGG: rle:RL3617 solute-binding component of ABC transporter YP_003009428.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH3441 L-arabinose ABC transporter ATP-binding protein YP_003009429.1 PFAM: inner-membrane translocator; KEGG: bha:BH3440 L-arabinose ABC transporter (permease) YP_003009430.1 KEGG: bha:BH3448 sugar ABC transporter (sugar-binding protein) YP_003009431.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003009432.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH3446 hypothetical protein YP_003009433.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU36160 hypothetical protein YP_003009434.1 SMART: rhodanese; KEGG: bha:BH2092 hypothetical protein YP_003009438.1 PFAM: protein of unknown function DUF975; KEGG: baa:BA_0399 hypothetical protein YP_003009440.1 PFAM: Fibronectin type III domain protein; KEGG: hypothetical protein YP_003009441.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003009442.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003009443.1 PFAM: extracellular solute-binding protein family 1; KEGG: cja:CJA_3468 bacterial extracellular solute-binding protein YP_003009444.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_9244 sugar ABC transporter YP_003009445.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30290 maltose transporter YP_003009446.1 PFAM: S-layer domain protein; Fibronectin type III domain protein; KEGG: yen:YE4100 beta-1,4 mannanase YP_003009447.1 PFAM: xylose isomerase; KEGG: sus:acid_7006 xylose isomerase domain-containing protein YP_003009448.1 PFAM: GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bha:BH1875 transcriptional repressor of the arabinose operon YP_003009449.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0905 L-arabinose transporter (sugar-binding protein) YP_003009450.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU28740 integral membrane protein YP_003009451.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU28730 integral membrane protein YP_003009452.1 PFAM: glycoside hydrolase family 43; KEGG: bha:BH1867 hypothetical protein YP_003009453.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein YP_003009454.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003009455.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003009456.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1065 hypothetical protein YP_003009457.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1066 hypothetical protein YP_003009458.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU39610 hypothetical protein YP_003009459.1 PFAM: transporter permease; ABC-3 protein; KEGG: bar:GBAA3534 iron compound ABC transporter permease YP_003009460.1 PFAM: transporter permease; KEGG: bha:BH1082 ferrichrome ABC transporter (permease) YP_003009461.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0989 AraC/XylS family transcriptional regulator YP_003009462.1 PFAM: periplasmic binding protein; KEGG: bha:BH0990 ABC transporter (substrate-binding protein) YP_003009463.1 PFAM: protein of unknown function DUF975; KEGG: baa:BA_0399 hypothetical protein YP_003009464.1 KEGG: cja:CJA_1396 hemolysin; TIGRFAM: outer membrane adhesin like proteiin; PFAM: S-layer domain protein; Cna B domain protein; Ig domain protein group 1 domain protein; SMART: Ig domain protein group 1 domain protein; cadherin YP_003009465.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA_pXO1_0048 TetR family transcriptional regulator YP_003009466.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mag:amb4213 ABC-type multidrug transporter, ATPase component; ABC-type uncharacterized transporter, ATPase component YP_003009467.1 PFAM: ABC transporter; KEGG: cff:CFF8240_0261 ABC transporter permease YP_003009468.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003009469.1 KEGG: rru:Rru_A2122 hypothetical protein YP_003009470.1 PFAM: glycosyl transferase group 1; KEGG: pat:Patl_1191 glycosyl transferase, group 1 YP_003009471.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_0087 major facilitator family transporter YP_003009473.1 KEGG: pin:Ping_1821 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003009474.1 PFAM: alpha/beta hydrolase fold; KEGG: bsu:BSU34100 alpha/beta hydrolase YP_003009475.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_1833 helix-turn-helix domain-containing protein YP_003009476.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine YP_003009477.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003009479.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bar:GBAA3917 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003009480.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bar:GBAA2163 HD domain-containing protein YP_003009481.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bar:GBAA3339 glyoxalase family protein YP_003009482.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: baa:BA_0457 ABC transporter YP_003009483.1 PFAM: ABC transporter; KEGG: baa:BA_0456 ABC-2 type transporter permease YP_003009484.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: baa:BA_0455 HATPase_c, histidine kinase-, DNA gyrase B-, phytochrome-like ATPase YP_003009485.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bar:GBAA5597 DNA-binding response regulator YP_003009486.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vsa:VSAL_I1419 acetyltransferase YP_003009487.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: psb:Psyr_3111 regulatory protein, LysR:LysR, substrate-binding YP_003009488.1 KEGG: bsu:BSU32890 hypothetical protein YP_003009489.1 PFAM: carboxymuconolactone decarboxylase; KEGG: spe:Spro_1459 carboxymuconolactone decarboxylase YP_003009490.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_1062 acetyltransferase YP_003009491.1 PFAM: protein of unknown function DUF1200; KEGG: prw:PsycPRwf_2400 hypothetical protein YP_003009492.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3678 two-component sensor histidine kinase YP_003009493.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH3679 two-component response regulator YP_003009494.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3680 sugar ABC transporter (sugar-binding protein) YP_003009495.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3681 sugar ABC transporter (permease) YP_003009496.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3682 sugar ABC transporter (permease) YP_003009497.1 TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: bha:BH1933 thiamine biosynthesis protein ThiC YP_003009500.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: scl:sce1535 alcohol dehydrogenase YP_003009501.1 PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bar:GBAA0692 hypothetical protein YP_003009502.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2089 acetyltransferase YP_003009503.1 KEGG: bar:GBAA2473 hypothetical protein YP_003009504.1 PFAM: RDD domain containing protein YP_003009505.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003009506.1 PFAM: oxidoreductase; homoserine dehydrogenase NAD-binding; oxidoreductase domain; KEGG: yps:YPTB1912 oxidoreductase YP_003009507.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: bsu:BSU27770 hypothetical protein YP_003009508.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3678 two-component sensor histidine kinase YP_003009509.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003009510.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, multiple sugar transporter permease YP_003009511.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30170 hypothetical protein YP_003009512.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU30160 hypothetical protein YP_003009513.1 KEGG: swd:Swoo_3656 hypothetical protein YP_003009514.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: bha:BH0479 hypothetical protein YP_003009515.1 PFAM: protein of unknown function DUF1963; KEGG: cco:CCC13826_0556 peptide methionine sulfoxide reductase MsrA/MsrB YP_003009516.1 PFAM: glycoside hydrolase family 43; KEGG: bsu:BSU17580 xylan beta-1,4-xylosidase YP_003009517.1 PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppf:Pput_3265 AraC family transcriptional regulator YP_003009518.1 PFAM: extracellular solute-binding protein family 5; KEGG: bsu:BSU11380 oligopeptide ABC transporter (oligopeptide-binding protein) YP_003009519.1 KEGG: bar:GBAA3868 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase YP_003009520.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: HIS6; phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide isomerase ; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_003009521.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: baa:BA_1778 integral membrane protein DUF6 YP_003009522.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA2922 sulfonate ABC transporter ATP-binding protein YP_003009523.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU08850 aliphatic sulfonate ABC transporter (permease) YP_003009524.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: scl:sce8842 hypothetical protein YP_003009525.1 PFAM: regulatory protein TetR; KEGG: cja:CJA_1473 TetR family transcriptional regulator YP_003009526.1 KEGG: bar:GBAA2921 sulfonate ABC transporter sulfonate-binding protein, TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_003009527.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pla:Plav_0838 taurine dioxygenase YP_003009528.1 PFAM: stress responsive alpha-beta barrel domain protein; KEGG: mlo:mll5499 hypothetical protein YP_003009530.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: hypothetical protein YP_003009531.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: baa:BA_2277 lyase YP_003009532.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA2164 ABC transporter ATP-binding protein YP_003009533.1 PFAM: fumarylacetoacetate hydrolase; KEGG: bha:BH1071 hypothetical protein YP_003009534.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU32880 hypothetical protein YP_003009535.1 PFAM: ferritin; KEGG: bar:GBAA2013 general stress protein YP_003009536.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bar:GBAA4226 maltose operon transcriptional repressor YP_003009537.1 PFAM: extracellular solute-binding protein family 1; KEGG: vsp:VS_2590 maltose/maltodextrin-binding protein precursor YP_003009538.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA4228 maltosaccharide ABC transporter permease YP_003009539.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA4227 maltosaccharide ABC transporter permease YP_003009540.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ade:Adeh_4127 alpha amylase, catalytic region YP_003009542.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003009543.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3678 two-component sensor histidine kinase YP_003009544.1 PFAM: extracellular solute-binding protein family 1; KEGG: rde:RD1_3571 glycerol-3-phosphate ABC transporter periplasmic binding protein YP_003009545.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: scl:sce3058 sugar ABC transporter permease YP_003009546.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bra:BRADO4394 sugar ABC transporter permease YP_003009547.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: scl:sce7442 dehydrogenase of unknown specificity YP_003009548.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: rle:RL4233 epimerase YP_003009549.1 PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: bar:GBAA4230 alpha-amylase YP_003009550.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sus:acid_0592 thioredoxin reductase YP_003009551.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: baa:BA_2459 response_reg, response regulator receiver domain YP_003009552.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA3260 sensor histidine kinase YP_003009553.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: bha:BH3652 UTP-glucose-1-phosphate uridylyltransferase YP_003009554.1 PFAM: ABC transporter; antibiotic biosynthesis monooxygenase; SMART: ATPase AAA; KEGG: bha:BH3292 ferrichrome ABC transporter ATP-binding protein YP_003009555.1 PFAM: transporter permease; KEGG: bha:BH3291 ferrichrome ABC transporter (permease) YP_003009556.1 PFAM: periplasmic binding protein; KEGG: bha:BH3290 ferrichrome ABC transporter (ferrichrome-binding protein) YP_003009557.1 PFAM: NEAr transporter; SMART: NEAr transporter; KEGG: bha:BH3299 hypothetical protein YP_003009558.1 PFAM: NEAr transporter; S-layer domain protein; SMART: NEAr transporter; KEGG: hypothetical protein YP_003009559.1 PFAM: periplasmic binding protein; KEGG: bar:GBAA4786 iron compound ABC transporter iron compound-binding protein YP_003009560.1 PFAM: transporter permease; KEGG: bha:BH3296 ferrichrome ABC transporter (permease) YP_003009561.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA4784 iron compound ABC transporter ATP-binding protein YP_003009563.1 KEGG: hypothetical protein YP_003009564.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: psa:PST_1227 serine protease MucD precursor YP_003009566.1 KEGG: GH10507 gene product from transcript GH10507-RA YP_003009567.1 PFAM: manganese and iron superoxide dismutase; KEGG: bha:BH1409 superoxide dismutase YP_003009568.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eta:ETA_10870 acetyltransferase YP_003009569.1 PFAM: protein of unknown function DUF402; KEGG: bsu:BSU08680 hypothetical protein YP_003009570.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: bar:GBAA3977 signal peptidase I S YP_003009571.1 PFAM: ribonuclease H; KEGG: sat:SYN_00291 ribonuclease H YP_003009572.1 KEGG: baa:BA_1117 hypothetical protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: hypothetical protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein YP_003009573.1 KEGG: bsu:BSU17910 hypothetical protein YP_003009574.1 KEGG: bsu:BSU22780 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I YP_003009575.1 PFAM: phospholipase/carboxylesterase; KEGG: bha:BH1308 hypothetical protein YP_003009576.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bha:BH2137 IclR family transcriptional regulator YP_003009577.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: bha:BH2299 aconitate hydratase YP_003009578.1 KEGG: bha:BH1022 hypothetical protein YP_003009579.1 KEGG: bsu:BSU04560 D-alanyl-alanine synthetase A; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp YP_003009581.1 TIGRFAM: UV-endonuclease UvdE; PFAM: UV-endonuclease UvdE; KEGG: baa:BA_0818 AP2Ec, AP endonuclease family 2 YP_003009582.1 PFAM: protein of unknown function DUF81; KEGG: bsu:BSU32380 hypothetical protein YP_003009583.1 PFAM: inositol monophosphatase; KEGG: hypothetical protein YP_003009584.1 PFAM: S-layer domain protein; KEGG: sfu:Sfum_0670 hypothetical protein YP_003009585.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003009586.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003009587.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1065 hypothetical protein YP_003009588.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1066 hypothetical protein YP_003009589.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein YP_003009590.1 PFAM: glycoside hydrolase family 16; S-layer domain protein; carbohydrate-binding CenC domain protein; protein of unknown function DUF1533; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein YP_003009591.1 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate YP_003009592.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bsu:BSU35520 hypothetical protein YP_003009593.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: baa:BA_1103 ABC transporter YP_003009594.1 PFAM: protein of unknown function DUF990; KEGG: baa:BA_1104 hypothetical protein predicted by GeneMark YP_003009595.1 PFAM: protein of unknown function DUF990; KEGG: baa:BA_1105 ABC-2 type transporter permease YP_003009596.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bar:GBAA0536 bacterioferritin comigratory protein YP_003009597.1 PFAM: polysaccharide deacetylase; KEGG: bha:BH3902 endo-1,4-beta-xylanase YP_003009598.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; KEGG: bha:BH0604 methanol dehydrogenase regulatory protein YP_003009599.1 PFAM: protein of unknown function DUF58; KEGG: bar:GBAA2121 hypothetical protein YP_003009600.1 PFAM: transglutaminase; SMART: transglutaminase; KEGG: bha:BH0606 hypothetical protein YP_003009601.1 PFAM: polysaccharide deacetylase; KEGG: baa:BA_2464 polysaccharide deacetylase YP_003009602.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase; KEGG: bha:BH0607 GMP synthase YP_003009603.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003009604.1 PFAM: glycoside hydrolase; KEGG: mmw:Mmwyl1_0214 glycoside hydrolase family 3 protein YP_003009605.1 PFAM: xylose isomerase; KEGG: aba:acid345_1695 sugar phosphate isomerases/epimerases YP_003009606.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: bha:BH2165 hypothetical protein YP_003009607.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003009608.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003009609.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003009610.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003009611.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003009612.1 PFAM: glycoside hydrolase; KEGG: bur:Bcep18194_C6710 beta-glucosidase YP_003009613.1 PFAM: S-layer domain protein; KEGG: shw:Sputw3181_3921 hypothetical protein YP_003009614.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003009615.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: hypothetical protein YP_003009616.1 PFAM: glycoside hydrolase family 4; KEGG: baa:BA_0294 family 4 glycosyl hydrolase YP_003009617.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: lhk:LHK_00455 probable membrane permease YP_003009618.1 related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase; KEGG: bsu:BSU21390 hypothetical protein YP_003009619.1 KEGG: liver stage antigen YP_003009620.1 KEGG: baa:BA_0545 domain of unknown function DUF25; TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase B; methionine sulfoxide reductase A YP_003009621.1 PFAM: nitroreductase; KEGG: pmy:Pmen_1828 nitroreductase YP_003009622.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: scl:sce1783 MarR family transcriptional regulator YP_003009623.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bar:GBAA4303 MarR family transcriptional regulator YP_003009624.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU09010 hypothetical protein YP_003009625.1 PFAM: glycoside hydrolase family 18; peptidoglycan-binding LysM; SMART: chitinase II; peptidoglycan-binding LysM; KEGG: bha:BH2292 hypothetical protein YP_003009626.1 KEGG: bha:BH0623 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_003009627.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: bha:BH0624 phosphoribosylaminoimidazole carboxylase II YP_003009628.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: bha:BH0625 adenylosuccinate lyase YP_003009629.1 PFAM: SAICAR synthetase; KEGG: ppd:Ppro_3066 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_003009630.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: baa:BA_0864 uncharacterized ACR, YexA/UPF0062 family YP_003009631.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: baa:BA_0865 glutamine amidotransferase YP_003009632.1 KEGG: bsu:BSU06480 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003009633.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferaseI; phosphoribosyltransferase; KEGG: baa:BA_0867 glutamine amidotransferases class-II YP_003009634.1 KEGG: baa:BA_0868 AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003009635.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase; KEGG: baa:BA_0869 formyl transferase YP_003009636.1 KEGG: baa:BA_0870 AICARFT/IMPCHase bienzyme; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; SMART: AICARFT/IMPCHase bienzyme formylation region YP_003009637.1 KEGG: baa:BA_0871 phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase YP_003009639.1 PFAM: PGAP1 family protein; KEGG: pde:Pden_3004 peptidase S15 YP_003009640.1 KEGG: bsu:BSU06570 hypothetical protein YP_003009641.1 PFAM: protein of unknown function DUF47; KEGG: baa:BA_1995 protein of unknown function DUF47 YP_003009642.1 PFAM: phosphate transporter; KEGG: baa:BA_1994 PHO4, phosphate transporter family YP_003009644.1 KEGG: pna:Pnap_4375 hypothetical protein YP_003009646.1 TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: bha:BH0639 hypothetical protein YP_003009647.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: neu:NE1539 hypothetical protein YP_003009648.1 PFAM: diacylglycerol kinase; SMART: diacylglycerol kinase; KEGG: bsu:BSU06720 lipid kinase YP_003009649.1 KEGG: bha:BH0687 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function Met10; (uracil-5)-methyltransferase YP_003009650.1 PFAM: response regulator receiver; histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH2013 hypothetical protein YP_003009651.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bha:BH2016 hypothetical protein YP_003009652.1 KEGG: gur:Gura_0797 hypothetical protein; TIGRFAM: cell wall/surface repeat protein; PFAM: S-layer domain protein; Ig domain protein group 2 domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; Immunoglobulin subtype; Ig domain protein group 2 domain protein YP_003009653.1 PFAM: GerA spore germination protein; KEGG: bha:BH1989 spore germination protein YP_003009654.1 PFAM: Spore germination protein; KEGG: bar:GBAA3634 spore germination protein YP_003009655.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bar:GBAA4986 spore germination protein GerHC YP_003009656.1 PFAM: glycoside hydrolase family 43; KEGG: bha:BH3683 xylan beta-1,4-xylosidase YP_003009657.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3682 sugar ABC transporter (permease) YP_003009658.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3681 sugar ABC transporter (permease) YP_003009659.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3680 sugar ABC transporter (sugar-binding protein) YP_003009660.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH2110 hypothetical protein YP_003009661.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003009662.1 PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; KEGG: kpe:KPK_5057 glycosyl hydrolase, family 42 YP_003009663.1 PFAM: formiminotransferase-cyclodeaminase; KEGG: mca:MCA0507 methenyltetrahydrofolate cyclohydrolase YP_003009664.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: aav:Aave_2459 methenyltetrahydrofolate cyclohydrolase YP_003009665.1 KEGG: bar:GBAA1855 hypothetical protein YP_003009666.1 KEGG: baa:BA_2374 hypothetical protein YP_003009667.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bha:BH1126 ABC transporter ATP-binding protein YP_003009668.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bha:BH1125 ABC transporter ATP-binding protein YP_003009669.1 PFAM: DNA polymerase beta domain protein region; KEGG: lpc:LPC_2300 hypothetical protein YP_003009670.1 KEGG: scl:sce4015 hypothetical protein YP_003009671.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3842 two-component response regulator YP_003009672.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH2110 hypothetical protein YP_003009673.1 KEGG: bha:BH0796 hypothetical protein YP_003009674.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003009675.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003009676.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003009677.1 PFAM: phosphoglycerate mutase; KEGG: bha:BH0285 hypothetical protein YP_003009678.1 PFAM: protein of unknown function UPF0118; KEGG: bha:BH2921 hypothetical protein YP_003009679.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: hypothetical protein YP_003009680.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU03700 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003009681.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH1936 spore germination protein KB YP_003009682.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: hypothetical protein YP_003009684.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: bar:GBAA4372 hypothetical protein YP_003009685.1 PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA1830 fosmidomycin resistance protein YP_003009686.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_1840 AraC family transcriptional regulator YP_003009687.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: baa:BA_0264 HTH_MERR, helix_turn_helix, mercury resistance YP_003009688.1 PFAM: thioredoxin domain; KEGG: bsu:BSU28500 thioredoxin YP_003009689.1 KEGG: similar to ankyrin 2 ; K10380 ankyrin YP_003009690.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003009691.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003009692.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003009693.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0483 AraC/XylS family transcriptional regulator YP_003009694.1 SMART: Parallel beta-helix repeat; KEGG: sus:acid_5490 hypothetical protein YP_003009695.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: bsu:BSU09020 hypothetical protein YP_003009696.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU09010 hypothetical protein YP_003009697.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: scl:sce1783 MarR family transcriptional regulator YP_003009698.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_003009699.1 PFAM: methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; methyltransferase type 12; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gme:Gmet_2955 tellurite resistance protein TehB YP_003009700.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU06920 hypothetical protein YP_003009701.1 KEGG: bha:BH3319 hypothetical protein YP_003009702.1 PFAM: LmbE family protein; KEGG: bar:GBAA3524 hypothetical protein YP_003009703.1 PFAM: transglutaminase; SMART: transglutaminase; KEGG: bha:BH0890 hypothetical protein YP_003009704.1 PFAM: Domain of unknown function DUF1801; KEGG: lch:Lcho_2738 hypothetical protein YP_003009705.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_003009706.1 TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: L-seryl-tRNA selenium transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bar:GBAA5099 pyridoxal phosphate-dependent enzyme YP_003009707.1 PFAM: protein of unknown function DUF1341; KEGG: bar:GBAA5098 hypothetical protein YP_003009708.1 PFAM: PfkB domain protein; KEGG: bar:GBAA5097 carbohydrate kinase YP_003009709.1 PFAM: UbiC transcription regulator-associated domain protein; GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bar:GBAA5096 GntR family transcriptional regulator YP_003009710.1 PFAM: Domain of unknown function DUF1801; GCN5-related N-acetyltransferase; KEGG: bar:GBAA3586 acetyltransferase YP_003009711.1 KEGG: bha:BH0999 hypothetical protein YP_003009713.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003009714.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003009715.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1065 hypothetical protein YP_003009716.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1066 hypothetical protein YP_003009717.1 KEGG: hch:HCH_04792 beta-glucanase/beta-glucan synthetase; PFAM: glycoside hydrolase family 16; carbohydrate-binding CenC domain protein; S-layer domain protein; carbohydrate binding family 6; SMART: cellulose binding type IV YP_003009718.1 PFAM: glycoside hydrolase family 16; KEGG: bsu:BSU39070 endo-beta-1,3-1,4 glucanase YP_003009719.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein YP_003009720.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH2727 two-component sensor histidine kinase YP_003009721.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003009722.1 PFAM: extracellular solute-binding protein family 1; KEGG: mes:Meso_4520 extracellular solute-binding protein, family 1 YP_003009723.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_7347 ABC transporter membrane spanning protein (sugar) YP_003009724.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rlt:Rleg2_6092 binding-protein-dependent transport systems inner membrane component YP_003009725.1 PFAM: sulfatase; KEGG: rlt:Rleg2_6093 sulfatase YP_003009726.1 PFAM: protein of unknown function DUF323; KEGG: sumf1; sulfatase modifying factor 1 YP_003009727.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH2926 maltose/maltodextrin transporter (maltose/maltodextrin-binding protein) YP_003009728.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2925 maltose/maltodextrin transporter (permease) YP_003009729.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2924 maltose/maltodextrin transporter (permease) YP_003009730.1 PFAM: S-layer domain protein; carbohydrate binding family 6; KEGG: hypothetical protein YP_003009731.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003009732.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003009733.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003009734.1 PFAM: GerA spore germination protein; KEGG: baa:BA_1297 hypothetical protein YP_003009735.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bar:GBAA0710 spore germination protein GerLB YP_003009736.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: baa:BA_1299 hypothetical protein YP_003009738.1 PFAM: hypothetical protein; KEGG: mmr:Mmar10_1886 abortive infection protein YP_003009739.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bha:BH3840 sugar ABC transporter (sugar-binding protein) YP_003009740.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3841 two-component sensor histidine kinase YP_003009741.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3842 two-component response regulator YP_003009742.1 TIGRFAM: D-xylose ABC transporter periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: scl:sce6008 xylose binding protein transport system YP_003009743.1 KEGG: smd:Smed_4473 sugar uptake ABC transporter periplasmic solute-binding protein precursor YP_003009744.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH3441 L-arabinose ABC transporter ATP-binding protein YP_003009745.1 PFAM: inner-membrane translocator; KEGG: bha:BH3440 L-arabinose ABC transporter (permease) YP_003009746.1 TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: yen:YE1129 uracil transporter YP_003009747.1 PFAM: hypothetical protein; S-layer domain protein; Ig family protein; SMART: Ig domain protein group 2 domain protein; KEGG: she:Shewmr4_1752 alkaline phosphatase YP_003009748.1 PFAM: protein of unknown function DUF1273; KEGG: bsu:BSU22190 hypothetical protein YP_003009749.1 PFAM: oxidoreductase; semialdehyde dehydrogenase NAD - binding; KEGG: bsu:BSU31170 hypothetical protein YP_003009750.1 PFAM: SEC-C motif domain protein; KEGG: bsu:BSU02720 hypothetical protein YP_003009751.1 PFAM: peptidase M29 aminopeptidase II; KEGG: bsu:BSU14450 aminopeptidase YP_003009752.1 KEGG: bsu:BSU23630 hypothetical protein YP_003009753.1 PFAM: protein of unknown function DUF458; KEGG: bsu:BSU14110 hypothetical protein YP_003009754.1 PFAM: metallophosphoesterase; KEGG: baa:BA_1150 protein phosphatase 2A homologues, catalytic domain YP_003009755.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bar:GBAA4223 sporulation kinase B YP_003009756.1 KEGG: sat:SYN_00276 cytoplasmic protein YP_003009759.1 KEGG: bha:BH2017 hypothetical protein YP_003009760.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: psa:PST_2163 probable short-chain dehydrogenase YP_003009761.1 KEGG: apj:APJL_0663 lipoprotein precursor YP_003009762.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bsu:BSU38260 hypothetical protein YP_003009763.1 PFAM: iron permease FTR1; KEGG: bsu:BSU38280 hypothetical protein YP_003009764.1 KEGG: bar:GBAA4778 hypothetical protein YP_003009765.1 KEGG: rsk:RSKD131_1496 beta-mannanase precursor YP_003009767.1 PFAM: lipase class 3; KEGG: bar:GBAA5117 lipase family protein YP_003009768.1 KEGG: bar:GBAA2388 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein; threonyl/alanyl tRNA synthetase SAD YP_003009769.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: bsu:BSU24740 hypothetical protein YP_003009770.1 KEGG: scl:sce2666 hypothetical protein YP_003009771.1 PFAM: FAD dependent oxidoreductase; KEGG: baa:BA_1855 DAO, FAD dependent oxidoreductase YP_003009772.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2229 AraC/XylS family transcriptional regulator YP_003009773.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: bha:BH1107 galactokinase YP_003009774.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: bha:BH1108 UDP-glucose 4-epimerase YP_003009775.1 catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism YP_003009777.1 PFAM: protein of unknown function DUF1128; KEGG: baa:BA_0981 hypothetical protein YP_003009778.1 TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: baa:BA_0585 hypothetical protein YP_003009779.1 PFAM: alpha/beta hydrolase fold; KEGG: gme:Gmet_0263 alpha/beta hydrolase fold YP_003009780.1 KEGG: hypothetical protein YP_003009781.1 KEGG: pfl:PFL_1356 hypothetical protein YP_003009782.1 KEGG: sde:Sde_3232 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003009783.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sde:Sde_0670 metal dependent phosphohydrolase YP_003009785.1 PFAM: protein of unknown function DUF161; KEGG: bar:GBAA4506 hypothetical protein YP_003009786.1 KEGG: bha:BH0544 thiamine monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003009787.1 PFAM: protein of unknown function UPF0079; KEGG: bsu:BSU05910 hypothetical protein YP_003009788.1 PFAM: peptidase M22 glycoprotease; KEGG: baa:BA_0829 peptidase_M22, glycoprotease family YP_003009789.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: baa:BA_0830 acetyltransferase (GNAT) family YP_003009790.1 KEGG: bha:BH0548 DNA-binding/iron metalloprotein/AP endonuclease; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_003009792.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: sfu:Sfum_0306 2-isopropylmalate synthase YP_003009793.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sus:acid_6967 ABC transporter YP_003009795.1 PFAM: polyprenyl synthetase; KEGG: bsu:BSU31710 transcriptional regulator YP_003009797.1 KEGG: similar to polychaetoid CG31349-PB YP_003009798.1 KEGG: bsu:BSU31690 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003009799.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bsu:BSU31680 two-component response regulator YP_003009801.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA0262 ABC transporter ATP-binding protein YP_003009802.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: dal:Dalk_4395 5-formyltetrahydrofolate cyclo-ligase YP_003009803.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: bha:BH3023 molybdenum cofactor biosynthesis protein C YP_003009804.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: sat:SYN_02931 cytoplasmic protein YP_003009805.1 PFAM: molybdopterin binding domain; KEGG: ppd:Ppro_1552 molybdopterin binding domain-containing protein YP_003009806.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_003009807.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bsu:BSU05990 component of the twin-arginine pre-protein translocation pathway YP_003009808.1 PFAM: nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: bar:GBAA5122 glucose-1-phosphate adenylyltransferase YP_003009809.1 KEGG: bar:GBAA5123 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003009810.1 KEGG: bsu:BSU30950 glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1 YP_003009811.1 PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: bha:BH2927 maltogenic amylase YP_003009812.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003009814.1 KEGG: bar:GBAA0193 hypothetical protein YP_003009815.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA2530 TetR family transcriptional regulator YP_003009816.1 PFAM: chaperonin Cpn10; KEGG: bsu:BSU06020 co-chaperonin GroES YP_003009817.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: bsu:BSU06030 chaperonin GroEL YP_003009818.1 KEGG: bha:BH0186 hypothetical protein YP_003009819.1 TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bha:BH1514 xanthine phosphoribosyltransferase YP_003009820.1 TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: baa:BA_2110 xan_ur_permease, permease family YP_003009821.1 KEGG: set:SEN1975 hypothetical protein YP_003009822.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bha:BH1461 ABC transporter (substrate-binding protein) YP_003009823.1 TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sse:Ssed_3761 polar amino acid ABC transporter inner membrane protein YP_003009824.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: son:SO_1042 amino acid ABC transporter ATP-binding protein YP_003009825.1 KEGG: sdn:Sden_2976 alkaline phosphatase; PFAM: alkaline phosphatase; metalloenzyme domain protein; SMART: alkaline phosphatase YP_003009826.1 PFAM: SCP-like extracellular; KEGG: bha:BH1803 hypothetical protein YP_003009827.1 PFAM: GAF domain protein; KEGG: bar:GBAA4905 hypothetical protein YP_003009828.1 KEGG: bha:BH0498 hypothetical protein YP_003009829.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bha:BH0366 hypothetical protein YP_003009830.1 KEGG: PHD Zn finger-containing protein YP_003009831.1 KEGG: gme:Gmet_3085 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003009832.1 KEGG: prw:PsycPRwf_1162 hypothetical protein YP_003009833.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003009834.1 KEGG: bar:GBAA4843 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta YP_003009835.1 PFAM: hypothetical protein; KEGG: asa:ASA_3468 DedA family membrane protein YP_003009836.1 PFAM: asparaginase/glutaminase; KEGG: bsu:BSU02690 hypothetical protein YP_003009837.1 PFAM: asparaginase/glutaminase; S-layer domain protein; Fibronectin type III domain protein; KEGG: bsu:BSU02690 hypothetical protein YP_003009838.1 KEGG: bha:BH0519 hypothetical protein YP_003009839.1 KEGG: bha:BH0520 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_003009840.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: bha:BH0521 hypothetical protein YP_003009841.1 PFAM: PemK family protein; KEGG: bha:BH0522 hypothetical protein YP_003009842.1 PFAM: SAF domain protein; KEGG: bba:Bd0113 flp pilus assembly protein CpaB YP_003009843.1 KEGG: pfo:Pfl01_2022 ATPase involved in chromosome partitioning-like YP_003009844.1 PFAM: type II secretion system protein E; KEGG: aha:AHA_1456 CpaF YP_003009845.1 KEGG: dps:DP1529 TadB YP_003009851.1 PFAM: peptidase M24; creatinase; KEGG: gme:Gmet_2690 peptidase M24 YP_003009852.1 PFAM: membrane-flanked domain; KEGG: bar:GBAA1065 hypothetical protein YP_003009853.1 PFAM: membrane-flanked domain; KEGG: bsu:BSU04600 hypothetical protein YP_003009855.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: gsu:GSU3383 glutamyl-tRNA(Gln) amidotransferase subunit C YP_003009856.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_003009857.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB/Yqey domain protein; GatB central domain protein; KEGG: bsu:BSU06690 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_003009858.1 PFAM: MgtC/SapB transporter; KEGG: bph:Bphy_4307 MgtC/SapB transporter YP_003009859.1 KEGG: sus:acid_1228 hypothetical protein YP_003009860.1 PFAM: ferric-uptake regulator; KEGG: bsu:BSU08730 FUR family transcriptional regulator YP_003009861.1 PFAM: glycoside hydrolase family 18; copper amine oxidase domain protein; SMART: chitinase II; KEGG: hypothetical protein YP_003009862.1 KEGG: bsu:BSU08740 hypothetical protein YP_003009863.1 KEGG: bsu:BSU08750 hypothetical protein YP_003009864.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU03700 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003009865.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH1935 spore germination protein KC YP_003009867.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU03720 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003009868.1 KEGG: bha:BH1195 hypothetical protein YP_003009869.1 PFAM: PspA/IM30 family protein; KEGG: bar:GBAA5061 hypothetical protein YP_003009870.1 PFAM: PspC domain protein; KEGG: cbc:CbuK_0644 stress-responsive transcriptional regulator YP_003009871.1 PFAM: PspA/IM30 family protein; KEGG: bar:GBAA5061 hypothetical protein YP_003009872.1 KEGG: baa:BA_1978 HATPase_c, histidine kinase-, DNA gyrase B-, phytochrome-like ATPase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003009873.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: baa:BA_1979 REC, CheY-homologous receiver domain YP_003009877.1 KEGG: bsu:BSU23850 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003009878.1 PFAM: cyclase; KEGG: gbm:Gbem_3555 cyclase YP_003009879.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mxa:MXAN_5992 peptide chain release factor 3 YP_003009880.1 PFAM: hypothetical protein; KEGG: rso:RSc1614 hypothetical protein YP_003009881.1 PFAM: hypothetical protein; KEGG: sal:Sala_1089 TM2 YP_003009882.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: bha:BH0710 hypothetical protein YP_003009883.1 KEGG: bha:BH0709 hypothetical protein YP_003009884.1 PFAM: oxidoreductase; KEGG: bha:BH0708 hypothetical protein YP_003009885.1 PFAM: amidohydrolase; amidohydrolase; KEGG: pin:Ping_3686 phosphonate metabolism protein PhnM YP_003009886.1 TIGRFAM: small, acid-soluble spore protein I; KEGG: bsu:BSU28660 small acid-soluble spore protein SspI YP_003009887.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: bha:BH2663 potassium uptake protein YP_003009888.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bsu:BSU28650 hypothetical protein YP_003009889.1 KEGG: cja:CJA_0818 beta-xylosidase/alpha-L-arabinfuranosidase, , gly43D; PFAM: glycoside hydrolase family 43; S-layer domain protein; carbohydrate binding family 6; hypothetical protein; SMART: Ig domain protein group 2 domain protein YP_003009890.1 PFAM: hypothetical protein; S-layer domain protein; SMART: hypothetical protein; KEGG: cja:CJA_3068 hypothetical protein YP_003009891.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: baa:BA_1438 SASP, small, acid-soluble spore proteins, alpha/beta type YP_003009892.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA YP_003009893.1 PFAM: PspA/IM30 family protein; KEGG: cps:CPS_4751 phage shock protein A YP_003009895.1 TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bha:BH4036 cadmium-transporting ATPase YP_003009896.1 PFAM: copper resistance D domain protein; KEGG: bha:BH2290 hypothetical protein YP_003009897.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: wsu:WS1120 transcriptional regulator YP_003009898.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ank:AnaeK_4061 thioredoxin reductase YP_003009899.1 PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: gsu:GSU0352 thiol peroxidase YP_003009900.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dal:Dalk_3666 MarR family transcriptional regulator YP_003009901.1 PFAM: aldo/keto reductase; KEGG: gur:Gura_4373 2,5-didehydrogluconate reductase YP_003009902.1 PFAM: AraC-type transcriptional regulator; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pag:PLES_32751 transcriptional regulator YP_003009903.1 PFAM: major facilitator superfamily MFS_1; KEGG: asu:Asuc_1424 major facilitator transporter YP_003009904.1 KEGG: asa:ASA_4263 kinase YP_003009905.1 KEGG: bar:GBAA1021 hypothetical protein YP_003009906.1 KEGG: bar:GBAA2820 hypothetical protein YP_003009907.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003009908.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_1766 TetR family transcriptional regulator YP_003009909.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: bsu:BSU14610 dihydrolipoamide dehydrogenase YP_003009910.1 PFAM: aldo/keto reductase; KEGG: nar:Saro_3685 aldo/keto reductase YP_003009911.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0724 AraC/XylS family transcriptional regulator YP_003009912.1 PFAM: protein of unknown function DUF6 transmembrane; protein of unknown function DUF250; KEGG: baa:BA_1778 integral membrane protein DUF6 YP_003009913.1 KEGG: gsu:GSU0371 carbohydrate phosphorylase family protein; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003009914.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: bha:BH2331 hypothetical protein YP_003009915.1 PFAM: glycoside hydrolase family 43; KEGG: bha:BH1867 hypothetical protein YP_003009918.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003009919.1 PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: bha:BH0789 hypothetical protein YP_003009920.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003009921.1 PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_4916 extracellular solute-binding protein YP_003009922.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003009923.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH1910 two-component response regulator YP_003009924.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003009925.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0481 ABC transporter (permiase) YP_003009926.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU30160 hypothetical protein YP_003009927.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: smd:Smed_3335 oxidoreductase domain-containing protein YP_003009928.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bra:BRADO6652 AraC family transcriptional regulator YP_003009929.1 PFAM: glycoside hydrolase family 35; glycoside hydrolase family 42 domain protein; KEGG: similar to galactosidase, beta 1-like 2 YP_003009930.1 KEGG: sus:acid_2625 PA14 domain-containing protein YP_003009931.1 PFAM: S-layer domain protein; SMART: Parallel beta-helix repeat; KEGG: hypothetical protein YP_003009933.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: geo:Geob_3771 MATE efflux family protein YP_003009934.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003009935.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003009936.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003009937.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003009938.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: rle:RL4246 GFO/IDH/MocA family oxidoreductase YP_003009939.1 PFAM: glycoside hydrolase; PA14 domain protein; SMART: PA14 domain protein; KEGG: xop:PXO_03856 glucan 1,4-beta-glucosidase YP_003009940.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: efe:EFER_2872 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_003009941.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: mlo:mll1687 UDP-galactose 4-epimerase YP_003009942.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hypothetical protein YP_003009943.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atu:Atu3022 ABC transporter membrane spanning protein (sugar) YP_003009944.1 PFAM: extracellular solute-binding protein family 1; KEGG: atu:Atu3024 ABC transporter transmembrane protein (sugar) YP_003009945.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2229 AraC/XylS family transcriptional regulator YP_003009946.1 PFAM: glycoside hydrolase family 8; KEGG: bha:BH2105 xylanase Y YP_003009947.1 TIGRFAM: 6-phospho 3-hexuloisomerase; PFAM: sugar isomerase (SIS); KEGG: bsu:BSU03450 6-phospho-3-hexuloisomerase (phi) YP_003009948.1 TIGRFAM: 3-hexulose-6-phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: bsu:BSU03460 3-hexulose-6-phosphate synthase (HPS) YP_003009949.1 PFAM: helix-turn-helix HxlR type; KEGG: bsu:BSU03470 positive regulator of hxlAB expression YP_003009950.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: bha:BH1509 methyl-accepting chemotaxis protein YP_003009953.1 KEGG: bar:GBAA2473 hypothetical protein YP_003009954.1 PFAM: ROK family protein; KEGG: bsu:BSU05860 hypothetical protein YP_003009955.1 KEGG: bha:BH3916 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_003009956.1 SMART: regulatory protein LacI; KEGG: sme:SM_b20537 transcriptional regulator protein YP_003009957.1 KEGG: hypothetical protein YP_003009958.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA1080 TetR family transcriptional regulator YP_003009959.1 TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; PFAM: ABC transporter; KEGG: bsu:BSU10160 hypothetical protein YP_003009960.1 PFAM: sulfatase; KEGG: baa:BA_0319 sulfatase YP_003009962.1 KEGG: baa:BA_1461 hypothetical protein YP_003009963.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: psa:PST_2902 cytidine/deoxycytidylate deaminase family protein YP_003009964.1 TIGRFAM: sporulation protein YunB; KEGG: bsu:BSU32350 hypothetical protein YP_003009965.1 PFAM: peptidase M23; KEGG: bha:BH3436 hypothetical protein YP_003009966.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_003009967.1 KEGG: bha:BH3433 hypothetical protein YP_003009968.1 PFAM: ATP-NAD/AcoX kinase; KEGG: bsu:BSU11610 inorganic polyphosphate/ATP-NAD kinase YP_003009969.1 TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: bha:BH2588 hypothetical protein YP_003009971.1 PFAM: globin; KEGG: baa:BA_1744 Bac_globin, protozoan/cyanobacterial globin YP_003009972.1 KEGG: hypothetical protein YP_003009973.1 KEGG: bha:BH3413 hypothetical protein YP_003009974.1 KEGG: bar:GBAA4392 hypothetical protein YP_003009975.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: oligopeptidase F; peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bha:BH0871 oligoendopeptidase F YP_003009976.1 KEGG: pna:Pnap_4375 hypothetical protein YP_003009977.1 PFAM: CBS domain containing protein; Helix-turn-helix type 11 domain protein; SMART: CBS domain containing protein; KEGG: bha:BH1372 hypothetical protein YP_003009978.1 PFAM: protein of unknown function DUF299; KEGG: bha:BH1373 hypothetical protein YP_003009979.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_003009980.1 KEGG: baa:BA_2056 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003009981.1 KEGG: gbm:Gbem_0610 transaldolase; TIGRFAM: transaldolase; PFAM: transaldolase YP_003009982.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bha:BH3669 capsular polysaccharide biosynthesis YP_003009983.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: bha:BH3717 UTP-glucose-1-phosphate uridylyltransferase YP_003009984.1 PFAM: sugar transferase; KEGG: shn:Shewana3_2005 WecB/TagA/CpsF family glycosyl transferase YP_003009985.1 PFAM: nucleotidyl transferase; mannose-6-phosphate isomerase type II; KEGG: mch:Mchl_5260 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_003009986.1 KEGG: bcm:Bcenmc03_2384 hypothetical protein YP_003009987.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bha:BH3669 capsular polysaccharide biosynthesis YP_003009988.1 TIGRFAM: capsular exopolysaccharide family; KEGG: bha:BH3668 capsular polysaccharide biosynthesis YP_003009989.1 PFAM: glycosyl transferase family 2; KEGG: bcj:BCAM0860 glycosyltransferase YP_003009990.1 KEGG: bph:Bphy_1064 transmembrane protein YP_003009991.1 PFAM: glycosyl transferase group 1; KEGG: bvi:Bcep1808_4209 glycosyl transferase, group 1 YP_003009992.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: bid:Bind_2015 polysaccharide biosynthesis protein YP_003009993.1 PFAM: glycosyl transferase group 1; KEGG: bcm:Bcenmc03_3695 glycosyl transferase group 1 YP_003009994.1 PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2537 lipopolysaccharide biosynthesis-related glycosyltransferase YP_003009995.1 PFAM: glycosyl transferase group 1; KEGG: mes:Meso_2594 glycosyl transferase, group 1 YP_003009996.1 KEGG: ftn:FTN_0937 hypothetical protein YP_003009997.1 KEGG: ppd:Ppro_0048 hypothetical protein YP_003009998.1 KEGG: gur:Gura_1356 hypothetical protein YP_003009999.1 KEGG: sfu:Sfum_0087 hypothetical protein YP_003010000.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sfu:Sfum_3988 ABC transporter YP_003010002.1 KEGG: vei:Veis_3289 cobyrinic acid a,c-diamide synthase YP_003010003.1 PFAM: type II secretion system protein E; KEGG: bph:Bphy_4346 FHA domain-containing protein YP_003010004.1 PFAM: type II secretion system protein; KEGG: dia:Dtpsy_2115 type II secretion system protein YP_003010005.1 PFAM: type II secretion system protein; KEGG: hypothetical protein YP_003010007.1 KEGG: hypothetical protein YP_003010008.1 KEGG: hypothetical protein YP_003010009.1 KEGG: AGAP002041-PA YP_003010010.1 PFAM: peptidase A24A prepilin type IV; KEGG: dvu:DVU2117 hypothetical protein YP_003010011.1 PFAM: Forkhead-associated protein; KEGG: nis:NIS_0193 hypothetical protein YP_003010012.1 PFAM: hypothetical protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: bsu:BSU08510 hypothetical protein YP_003010013.1 KEGG: hypothetical LOC552041 YP_003010014.1 KEGG: bar:GBAA3719 hypothetical protein YP_003010015.1 KEGG: bar:GBAA4508 endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: xylose isomerase; SMART: AP endonuclease family 2 YP_003010016.1 TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: bsu:BSU13110 formyltetrahydrofolate deformylase YP_003010017.1 TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: bha:BH2352 transketolase YP_003010018.1 PFAM: protein of unknown function DUF1255; KEGG: tcx:Tcr_1534 hypothetical protein YP_003010019.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: 2-hydroxy-3-oxopropionate reductase YP_003010020.1 PFAM: phosphoglucose isomerase (PGI); KEGG: bha:BH3343 glucose-6-phosphate isomerase YP_003010021.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: bar:GBAA5431 hypothetical protein YP_003010022.1 TIGRFAM: sulfate ABC transporter inner membrane protein; sulfate ABC transporter inner membrane protein CysT; molybdate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00258 sulfate uptake ABC transporter permease YP_003010023.1 TIGRFAM: sulfate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pcr:Pcryo_1388 sulfate ABC transporter permease CysW YP_003010024.1 KEGG: geo:Geob_1654 sulfate ABC transporter ATPase subunit; TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003010025.1 TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: scl:sce0326 periplasmic sulfate binding protein YP_003010026.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: vvu:VV1_2722 HAD superfamily hydrolase YP_003010027.1 KEGG: bsu:BSU19590 carboxy-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; peptidoglycan-binding protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003010028.1 KEGG: gsu:GSU1308 hypothetical protein YP_003010029.1 PFAM: ferritin; KEGG: baa:BA_0155 ferritin YP_003010030.1 PFAM: UvrD/REP helicase; KEGG: baa:BA_1774 UvrD/REP helicase YP_003010031.1 PFAM: GCN5-related N-acetyltransferase; KEGG: baa:BA_1890 acetyltransf, acetyltransferase (GNAT) family YP_003010032.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcm:Bcenmc03_6407 GCN5-related N-acetyltransferase YP_003010033.1 PFAM: ferric-uptake regulator; KEGG: bar:GBAA4313 FUR family transcriptional regulator YP_003010034.1 PFAM: Domain of unknown function DUF1904; KEGG: vha:VIBHAR_01019 hypothetical protein YP_003010035.1 TIGRFAM: squalene/oxidosqualene cyclase; PFAM: prenyltransferase/squalene oxidase; KEGG: bsu:BSU19320 squalene-hopene cyclase YP_003010038.1 KEGG: dps:DP3024 pseudouridine synthase; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003010039.1 PFAM: copper amine oxidase domain protein; peptidase S1 and S6 chymotrypsin/Hap; KEGG: scl:sce1629 serine protease YP_003010040.1 PFAM: radical SAM protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bha:BH2952 Mg-protoporphyrin IX monomethyl ester oxidative cyclase YP_003010041.1 PFAM: deoxynucleoside kinase; KEGG: bsu:BSU00140 deoxyadenosine/deoxycytidine kinase YP_003010042.1 PFAM: major facilitator superfamily MFS_1; KEGG: mmw:Mmwyl1_1174 major facilitator transporter YP_003010043.1 PFAM: ROK family protein; KEGG: bar:GBAA3400 ROK family protein YP_003010044.1 PFAM: rRNA methylase; KEGG: gsu:GSU0690 hypothetical protein YP_003010045.1 KEGG: bha:BH3284 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003010047.1 KEGG: bsu:BSU29900 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_003010048.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bar:GBAA5011 PAP2 family protein YP_003010049.1 PFAM: glycosyl transferase group 1; KEGG: bha:BH2688 alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase YP_003010050.1 PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_1411 glycosyl transferase YP_003010051.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: bar:GBAA4819 translation initiation factor IF-3 YP_003010052.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: bsu:BSU28860 50S ribosomal protein L35 YP_003010053.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: bha:BH3138 50S ribosomal protein L20 YP_003010054.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vvy:VVA1562 AraC-type DNA-binding domain-containing protein YP_003010055.1 KEGG: bha:BH0842 hypothetical protein YP_003010056.1 PFAM: carbohydrate binding family 6; KEGG: hypothetical protein YP_003010057.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: hypothetical protein YP_003010058.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003010059.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1911 transmembrane lipoprotein YP_003010060.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1912 transmembrane lipoprotein YP_003010061.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003010062.1 KEGG: hypothetical protein YP_003010063.1 KEGG: GH24514 gene product from transcript GH24514-RA YP_003010064.1 PFAM: GCN5-related N-acetyltransferase; KEGG: saz:Sama_1156 acetyltransferase YP_003010065.1 TIGRFAM: acetolactate synthase large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: bsu:BSU28310 acetolactate synthase catalytic subunit YP_003010066.1 TIGRFAM: acetolactate synthase small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: gsu:GSU1910 acetolactate synthase 3 regulatory subunit YP_003010067.1 KEGG: baa:BA_2355 acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase catalytic domain protein; CoA-binding protein; acetohydroxy acid isomeroreductase YP_003010068.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bsu:BSU28280 2-isopropylmalate synthase YP_003010069.1 PFAM: protein of unknown function UPF0047; KEGG: bsu:BSU31280 hypothetical protein YP_003010070.1 KEGG: bha:BH3057 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003010071.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bsu:BSU14220 hypothetical protein YP_003010072.1 PFAM: GerA spore germination protein; KEGG: bar:GBAA3633 spore germination protein YP_003010073.1 PFAM: Spore germination protein; KEGG: bsu:BSU03720 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003010074.1 TIGRFAM: germination protein, Ger(x)C family; KEGG: bha:BH2186 hypothetical protein YP_003010076.1 heat shock-induced YP_003010077.1 KEGG: bar:GBAA3482 hypothetical protein YP_003010078.1 KEGG: bha:BH1920 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003010079.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bsu:BSU32050 leucyl aminopeptidase YP_003010080.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003010081.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH2110 hypothetical protein YP_003010082.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH2111 hypothetical protein YP_003010083.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2112 transmembrane lipoprotein YP_003010084.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2113 ABC transporter (permease) YP_003010085.1 PFAM: glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; glycoside hydrolase family 67; KEGG: bha:BH1061 alpha-glucuronidase YP_003010086.1 KEGG: pat:Patl_2657 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10 YP_003010087.1 PFAM: glycoside hydrolase family 43; KEGG: sde:Sde_1655 translation initiation factor IF-1 YP_003010088.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bsu:BSU24210 hypothetical protein YP_003010089.1 PFAM: protein of unknown function DUF1061; KEGG: ban:BA3335 hypothetical protein YP_003010090.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_4511 transporter major facilitator family YP_003010092.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ecq:ECED1_0301 AraC-type DNA-binding domain-containing protein YP_003010094.1 TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: sus:acid_2129 PfpI family intracellular peptidase YP_003010095.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003010096.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1910 two-component response regulator YP_003010097.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: yen:YE0461 sugar transporter, permease YP_003010098.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cvi:CV_2899 sugar ABC transporter permease YP_003010099.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003010100.1 PFAM: glycosyl hydrolase family 32; SMART: glycoside hydrolase family 32; KEGG: eta:ETA_18900 sucrose-6-phosphate hydrolase YP_003010101.1 KEGG: bar:GBAA3133 hypothetical protein YP_003010102.1 TIGRFAM: sugar transporter; PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bsu:BSU33960 permease YP_003010103.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH3842 two-component response regulator YP_003010104.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3841 two-component sensor histidine kinase YP_003010105.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bha:BH3840 sugar ABC transporter (sugar-binding protein) YP_003010106.1 KEGG: bsu:BSU13990 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003010107.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bsu:BSU10840 LacI family transcription regulator YP_003010108.1 catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose YP_003010109.1 PFAM: class II aldolase/adducin family protein; KEGG: ppd:Ppro_2543 class II aldolase/adducin family protein YP_003010110.1 PFAM: carbohydrate kinase FGGY; KEGG: sus:acid_3424 carbohydrate kinase, FGGY YP_003010111.1 PFAM: RbsD or FucU transport; KEGG: hypothetical protein YP_003010112.1 KEGG: rsq:Rsph17025_1334 beta-mannanase-like protein YP_003010114.1 KEGG: bar:GBAA1837 hypothetical protein YP_003010115.1 PFAM: GntR family transcriptional regulator; GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: rle:pRL110362 GntR family transcriptional regulator YP_003010116.1 PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PE00245 sugar ABC transporter sugar-binding protein YP_003010117.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rle:pRL110365 permease of ABC transporter YP_003010118.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: oan:Oant_0352 binding-protein-dependent transport systems inner membrane component YP_003010119.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; KEGG: swp:swp_2455 cystathionine gamma-lyase YP_003010120.1 PFAM: thioesterase superfamily protein; KEGG: pmr:PMI0121 hypothetical protein YP_003010121.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: glo:Glov_0065 acetylornithine transaminase protein YP_003010122.1 KEGG: bha:BH0598 Na+-transporting ATP synthase; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_003010123.1 PFAM: protein of unknown function DUF445; KEGG: baa:BA_2291 hypothetical protein YP_003010124.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rso:RSc0749 ABC transporter ATP-binding protein YP_003010125.1 PFAM: conserved hypothetical protein; KEGG: bsu:BSU12240 hypothetical protein YP_003010126.1 PFAM: helix-turn-helix HxlR type; KEGG: bha:BH3303 hypothetical protein YP_003010127.1 PFAM: GTP cyclohydrolase II; KEGG: mfa:Mfla_1358 GTP cyclohydrolase II YP_003010129.1 PFAM: pyruvate carboxyltransferase; KEGG: abu:Abu_1489 HMGL family protein YP_003010130.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2792 acetyltransferase YP_003010132.1 PFAM: von Willebrand factor A; SMART: von Willebrand factor A; KEGG: scl:sce2218 hypothetical protein YP_003010133.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bar:GBAA2866 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase YP_003010134.1 PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1; KEGG: kpn:KPN_00722 carboxylase YP_003010135.1 KEGG: bha:BH1818 hypothetical protein; TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; SMART: allophanate hydrolase subunit 2 YP_003010136.1 PFAM: LamB/YcsF family protein; KEGG: bpt:Bpet0474 LamB/YcsF family protein YP_003010137.1 PFAM: AIG2 family protein; KEGG: reh:H16_A2229 hypothetical protein YP_003010139.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bha:BH3900 methyl-accepting chemotaxis protein YP_003010140.1 PFAM: major facilitator superfamily MFS_1; KEGG: bid:Bind_1234 major facilitator transporter YP_003010141.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dal:Dalk_3877 MarR family transcriptional regulator YP_003010143.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: eba:ebA6280 nitrate/nitrite sensor kinase YP_003010144.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rme:Rmet_2087 two component transcriptional regulator, LuxR family YP_003010145.1 KEGG: bha:BH3111 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003010146.1 TIGRFAM: phenylalanyl-tRNA synthetase subunit beta; KEGG: bha:BH3110 phenylalanyl-tRNA synthetase subunit beta YP_003010147.1 KEGG: hypothetical protein YP_003010148.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gme:Gmet_0422 short-chain dehydrogenase/reductase SDR YP_003010149.1 PFAM: cytochrome C oxidase subunit II; KEGG: bha:BH2028 hypothetical protein YP_003010150.1 PFAM: membrane protein of unknown function; KEGG: gme:Gmet_3555 membrane protein of unknown function YP_003010151.1 KEGG: bha:BH3106 recombination and DNA strand exchange inhibitor protein; TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2 YP_003010152.1 PFAM: protein of unknown function DUF350; KEGG: bha:BH3105 hypothetical protein YP_003010153.1 KEGG: Mys45A; Mystery 45A YP_003010154.1 KEGG: bsu:BSU25010 hypothetical protein YP_003010155.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: baa:BA_2337 PALP, pyridoxal-phosphate dependent enzyme YP_003010156.1 PFAM: Spore coat protein CotH; KEGG: bar:GBAA2046 spore coat protein H YP_003010157.1 KEGG: bsu:BSU36050 spore coat protein (outer) YP_003010158.1 KEGG: bsu:BSU36040 hypothetical protein YP_003010159.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bar:GBAA_pXO1_0156 spore germination protein XB YP_003010160.1 PFAM: GerA spore germination protein; KEGG: bar:GBAA_pXO1_0157 spore germination protein XA YP_003010161.1 TIGRFAM: germination protein, Ger(x)C family; KEGG: hypothetical protein YP_003010162.1 KEGG: bha:BH3489 hypothetical protein YP_003010163.1 PFAM: Coat F domain protein; KEGG: hypothetical protein YP_003010164.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bha:BH3351 AsnC/Lrp family transcriptional regulator YP_003010165.1 PFAM: aminotransferase class I and II; KEGG: bha:BH3350 hypothetical protein YP_003010166.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bsu:BSU33150 hypothetical protein YP_003010167.1 TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; KEGG: tbd:Tbd_0810 ribosomal large subunit pseudouridine synthase D YP_003010168.1 PFAM: arsenate reductase; KEGG: bha:BH3485 arsenate reductase YP_003010169.1 PFAM: aminotransferase class I and II; KEGG: bar:GBAA2899 aspartate aminotransferase YP_003010170.1 PFAM: 5'-3' exonuclease; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; KEGG: baa:BA_2123 5'-3' exonuclease YP_003010171.1 PFAM: S-layer domain protein; KEGG: sdn:Sden_3728 cadherin YP_003010172.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_0328 acetyltransferase YP_003010173.1 PFAM: hypothetical protein; KEGG: sus:acid_0151 phage tail collar domain-containing protein YP_003010174.1 PFAM: hypothetical protein; KEGG: sus:acid_0150 phage tail collar domain-containing protein YP_003010175.1 PFAM: hypothetical protein; KEGG: mxa:MXAN_0326 phage tail collar domain-containing protein YP_003010176.1 KEGG: bha:BH3337 hypothetical protein YP_003010177.1 KEGG: bha:BH3432 hypothetical protein YP_003010178.1 PFAM: HRDC domain protein; SMART: HRDC domain protein; KEGG: mgm:Mmc1_1442 ATP-dependent DNA helicase RecQ YP_003010180.1 PFAM: CheC domain protein; KEGG: bha:BH1088 chemotaxis YP_003010181.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bar:GBAA4357 short chain dehydrogenase/reductase family oxidoreductase YP_003010182.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: bar:GBAA2109 DEAD-box ATP dependent DNA helicase YP_003010183.1 PFAM: S-layer domain protein; KEGG: bar:GBAA2528 N-acetylmuramoyl-L-alanine amidase YP_003010184.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: baa:BA_1605 ABC transporter YP_003010185.1 PFAM: ABC transporter EcsB; KEGG: bsu:BSU10050 ABC transporter membrane protein YP_003010186.1 PFAM: aminotransferase class I and II; KEGG: geo:Geob_2854 aminotransferase class I and II YP_003010188.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: msu:MS0060 DNA-binding transcriptional regulator AraC YP_003010189.1 KEGG: bar:GBAA4565 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_003010190.1 PFAM: glycosyl transferase group 1; KEGG: bsu:BSU30910 spore coat protein YP_003010191.1 KEGG: hypothetical protein YP_003010192.1 PFAM: glycosyl transferase family 2; KEGG: bar:GBAA3026 glycosyl transferase, group 2 family protein YP_003010193.1 PFAM: nucleotidyl transferase; KEGG: baa:BA_1763 NTP_transferase, nucleotidyl transferase YP_003010194.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_3740 glycosyl transferase family 2 YP_003010199.1 KEGG: bha:BH2839 maturation of the outermost layer of the spore YP_003010200.1 KEGG: bha:BH2839 maturation of the outermost layer of the spore YP_003010201.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis YP_003010202.1 KEGG: bsu:BSU09150 hypothetical protein YP_003010203.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: bha:BH3075 transcriptional regulator of spore coat protein (spore germination protein) YP_003010204.1 PFAM: catalase domain protein; KEGG: bha:BH1306 catalase YP_003010205.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003010206.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: hypothetical protein YP_003010207.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein YP_003010208.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1865 sugar transporter (permease) (binding protein dependent transporter) YP_003010209.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1866 sugar transporter (permease) (binding protein dependent transporter) YP_003010210.1 PFAM: protein of unknown function DUF1680; KEGG: mlo:mlr2247 hypothetical protein YP_003010211.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: mxa:MXAN_1144 TPR domain-containing protein YP_003010212.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bha:BH2752 two-component sensor histidine kinase YP_003010213.1 PFAM: zinc finger SWIM domain protein; KEGG: baa:BA_0334 hypothetical protein YP_003010214.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: baa:BA_0335 SNF2_N, SNF2 and others N-terminal domain YP_003010216.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3680 sugar ABC transporter (sugar-binding protein) YP_003010217.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: vei:Veis_0945 binding-protein-dependent transport systems inner membrane component YP_003010218.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3682 sugar ABC transporter (permease) YP_003010219.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003010220.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3842 two-component response regulator YP_003010221.1 PFAM: glycoside hydrolase; KEGG: bha:BH0675 beta-hexosamidase A precursor YP_003010222.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate YP_003010223.1 TIGRFAM: dethiobiotin synthase; KEGG: bar:GBAA4340 dithiobiotin synthetase YP_003010224.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine YP_003010225.1 KEGG: bar:GBAA4339 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_003010226.1 PFAM: alpha/beta hydrolase fold; KEGG: bha:BH3908 hypothetical protein YP_003010227.1 TIGRFAM: biotin biosynthesis protein BioC; PFAM: methyltransferase type 11; NodS family protein; methyltransferase type 12; KEGG: bha:BH3909 biotin synthesis BioC proein YP_003010228.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: abu:Abu_1447 HAD-superfamily hydrolase YP_003010229.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: vfi:VF_0782 DNA-binding transcriptional activator of copper-responsive regulon genes YP_003010230.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: abo:ABO_2112 dehydrogenase/reductase YP_003010231.1 PFAM: NmrA family protein; KEGG: hypothetical protein YP_003010232.1 KEGG: pmy:Pmen_1303 deaminase-reductase domain-containing protein YP_003010233.1 PFAM: alpha/beta hydrolase fold; KEGG: hch:HCH_05560 alpha/beta superfamily hydrolase/acyltransferase YP_003010234.1 PFAM: helix-turn-helix HxlR type; KEGG: dal:Dalk_2971 HxlR family transcriptional regulator YP_003010235.1 PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO5867 hypothetical protein YP_003010236.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA3543 LysR family transcriptional regulator YP_003010237.1 SMART: von Willebrand factor A; KEGG: bps:BPSL0569 hypothetical protein YP_003010238.1 KEGG: dac:Daci_2301 hypothetical protein YP_003010239.1 KEGG: dac:Daci_2302 Mn2+-dependent serine/threonine protein kinase YP_003010240.1 PFAM: aldo/keto reductase; KEGG: sme:SM_b20648 oxidoreductase protein YP_003010241.1 PFAM: NUDIX hydrolase; KEGG: sbn:Sbal195_4018 NUDIX hydrolase YP_003010242.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein YP_003010243.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, multiple sugar transporter permease YP_003010244.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003010245.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3560 AlgQ1, multiple sugar transporter substrate-binding protein YP_003010246.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003010247.1 PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: sus:acid_4210 alpha-L-fucosidase YP_003010248.1 PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: hypothetical protein YP_003010249.1 KEGG: sus:acid_2798 hypothetical protein YP_003010250.1 PFAM: transglutaminase; SMART: transglutaminase; KEGG: hypothetical protein YP_003010251.1 KEGG: bar:GBAA0385 chitinase B; PFAM: glycoside hydrolase family 18; SMART: chitinase II YP_003010252.1 PFAM: xylose isomerase; KEGG: sus:acid_1577 xylose isomerase domain-containing protein YP_003010254.1 KEGG: baa:BA_1881 hypothetical protein YP_003010256.1 KEGG: ypi:YpsIP31758_1449 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003010257.1 KEGG: hypothetical protein YP_003010258.1 KEGG: hypothetical protein YP_003010259.1 KEGG: bsu:BSU13530 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003010260.1 PFAM: sodium symporter; KEGG: bsu:BSU01590 hypothetical protein YP_003010261.1 KEGG: bha:BH3156 two-component sensor histidine kinase involved in phosphate regulation; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_003010262.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH3157 two-component response regulator involved in phosphate regulation YP_003010263.1 PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003010264.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: baa:BA_0009 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_003010265.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bha:BH0577 hypothetical protein YP_003010266.1 PFAM: excinuclease ABC subunit C SMART: excinuclease ABC subunit C KEGG: bar:GBAA2705 endo/excinuclease amino terminal domain-containing protein YP_003010267.1 PFAM: glycoside hydrolase family 9; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: cja:CJA_1633 endo-1,4-beta glucanase, , cel9B YP_003010268.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH0386 hypothetical protein YP_003010269.1 TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bar:GBAA1353 oligoendopeptidase F YP_003010270.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; KEGG: bar:GBAA3206 M20/M25/M40 family peptidase YP_003010271.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3702 transcriptional regulator YP_003010272.1 PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: eca:ECA3179 beta-galactosidase YP_003010273.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_003010277.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: gur:Gura_3394 methyl-accepting chemotaxis sensory transducer YP_003010278.1 KEGG: bha:BH2991 phosphate ABC transporter ATP-binding protein; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003010279.1 TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU family protein; KEGG: hypothetical protein YP_003010280.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003010281.1 KEGG: bha:BH3153 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2 YP_003010282.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_003010283.1 TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204; KEGG: bar:GBAA4829 hypothetical protein YP_003010284.1 KEGG: bha:BH3150 hypothetical protein; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_003010285.1 PFAM: lytic transglycosylase catalytic; KEGG: mxa:MXAN_3344 transglycosylase SLT domain-containing protein YP_003010286.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: baa:BA_1438 SASP, small, acid-soluble spore proteins, alpha/beta type YP_003010287.1 PFAM: ATP-cone domain protein; KEGG: bha:BH3146 transcriptional regulator NrdR YP_003010288.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: similar to hCG19844 YP_003010289.1 KEGG: hypothetical protein YP_003010295.1 KEGG: bxe:Bxe_A3103 hypothetical protein YP_003010296.1 PFAM: HNH endonuclease; KEGG: baa:BA_1037 hypothetical protein YP_003010297.1 KEGG: bar:GBAA0464 hypothetical protein YP_003010298.1 PFAM: terminase; KEGG: bar:GBAA3787 prophage LambdaBa01, terminase, large subunit YP_003010299.1 PFAM: portal protein; KEGG: bar:GBAA3786 hypothetical protein YP_003010300.1 TIGRFAM: phage prohead protease HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: ara:Arad_2296 phage head maturation protease YP_003010301.1 KEGG: bar:GBAA3784 phage major capsid protein YP_003010302.1 KEGG: hypothetical protein YP_003010303.1 TIGRFAM: uncharacterized phage protein ( DNA packaging); KEGG: baa:BA_1046 hypothetical protein YP_003010304.1 TIGRFAM: phage head-tail adaptor; KEGG: baa:BA_1047 hypothetical protein YP_003010305.1 TIGRFAM: phage protein, HK97 gp10 family YP_003010306.1 KEGG: dvm:DvMF_1650 hypothetical protein YP_003010307.1 KEGG: avi:Avi_6193 outer capsid protein Hoc YP_003010310.1 KEGG: baa:BA_1053 ERM, ezrin/radixin/moesin family YP_003010317.1 KEGG: pfl:PFL_0133 calcium-binding outer membrane-like protein YP_003010319.1 TIGRFAM: phage uncharacterized protein, XkdX family YP_003010320.1 TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: bha:BH0965 hypothetical protein YP_003010321.1 PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: ecg:E2348C_2247 predicted hydrolase YP_003010329.1 KEGG: hypothetical protein YP_003010330.1 PFAM: Accessory gene regulator B; KEGG: bha:BH3475 hypothetical protein YP_003010333.1 SMART: helix-turn-helix domain protein YP_003010335.1 KEGG: gbm:Gbem_1758 transcriptional repressor, LexA family; TIGRFAM: LexA repressor; PFAM: peptidase S24 and S26 domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003010336.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003010337.1 TIGRFAM: phage regulatory protein, Rha family; KEGG: ecz:ECS88_0544 antirepressor from phage YP_003010340.1 KEGG: GOLGA3; golgi autoantigen, golgin subfamily a, 3 YP_003010341.1 KEGG: predicted protein YP_003010343.1 PFAM: RecT protein; KEGG: mxa:MXAN_2010 phage recombination protein Bet YP_003010344.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: ecg:E2348C_2519 predicted HNH endonuclease YP_003010345.1 PFAM: beta-lactamase; KEGG: bha:BH4023 hypothetical protein YP_003010346.1 KEGG: hypothetical protein YP_003010347.1 KEGG: seh:SeHA_C1119 replication protein O YP_003010348.1 KEGG: bha:BH4029 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: ATPase AAA YP_003010350.1 PFAM: LexA DNA-binding domain protein; KEGG: bar:GBAA3754 LexA repressor YP_003010352.1 KEGG: shw:Sputw3181_2524 phage protein YP_003010353.1 KEGG: shw:Sputw3181_2525 hypothetical protein YP_003010354.1 PFAM: dUTPase; KEGG: bar:GBAA4816 hypothetical protein YP_003010355.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: yen:YE2362 cytosine-specific modification methylase YP_003010357.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: psb:Psyr_2825 DNA methylase N-4/N-6 YP_003010359.1 KEGG: erythrocyte binding protein YP_003010361.1 PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bar:GBAA3803 positive control sigma-like factor YP_003010363.1 PFAM: Resolvase domain; Recombinase; KEGG: msl:Msil_1942 resolvase domain protein YP_003010364.1 KEGG: sil:SPO2057 hypothetical protein YP_003010365.1 PFAM: KWG Leptospira repeat protein; KEGG: geo:Geob_0055 hypothetical protein YP_003010366.1 PFAM: Ig domain protein; S-layer domain protein; KEGG: hypothetical protein YP_003010367.1 KEGG: hypothetical protein YP_003010368.1 PFAM: GntR family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: rsq:Rsph17025_3653 hypothetical protein YP_003010369.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: nmu:Nmul_A1940 glycoside hydrolase family protein YP_003010370.1 PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll4149 sugar ABC transporter (sugar-binding protein) YP_003010371.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: xca:xccb100_1975 permease of a sugar import ABC transporter YP_003010372.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mca:MCA1924 sugar ABC transporter permease YP_003010373.1 KEGG: ypi:YpsIP31758_0708 hypothetical protein YP_003010374.1 KEGG: hypothetical protein YP_003010375.1 KEGG: bsu:BSU39520 hypothetical protein YP_003010376.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: baa:BA_0094 ABC transporter YP_003010377.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mlo:mll4791 ABC transporter permease YP_003010378.1 PFAM: NLPA lipoprotein; KEGG: aav:Aave_1575 YaeC family lipoprotein YP_003010379.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spe:Spro_3104 AraC family transcriptional regulator YP_003010380.1 PFAM: aldo/keto reductase; KEGG: yen:YE1221 ion channel protein YP_003010382.1 PFAM: copper amine oxidase domain protein YP_003010384.1 KEGG: bsu:BSU39010 hypothetical protein YP_003010385.1 KEGG: bsu:BSU33730 choline ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter; CBS domain containing protein; SMART: ATPase AAA; CBS domain containing protein YP_003010386.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU33820 glycine betaine/carnitine/choline ABC transporter membrane protein YP_003010387.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: bsu:BSU33710 choline ABC transporter (choline-binding protein) YP_003010388.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU33800 glycine betaine/carnitine/choline ABC transporter membrane protein YP_003010389.1 PFAM: GCN5-related N-acetyltransferase; aminoglycoside phosphotransferase; protein of unknown function DUF227; KEGG: Juvenile hormone-inducible protein YP_003010390.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: si:dkey-174m14.2 ; K11162 retinol dehydrogenase 14 YP_003010391.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ngk:NGK_1315 MerR-family transcriptional regulator YP_003010392.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mca:MCA0894 ABC transporter ATP-binding/permease YP_003010393.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rpc:RPC_1927 ABC transporter YP_003010396.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_3944 major facilitator family transporter YP_003010397.1 PFAM: regulatory protein TetR; KEGG: pol:Bpro_5182 TetR family transcriptional regulator YP_003010399.1 KEGG: bha:BH3081 hypothetical protein YP_003010401.1 GG10533 gene product from transcript GG10533-RA; KEGG: GG10533 gene product from transcript GG10533-RA YP_003010402.1 KEGG: ypb:YPTS_4102 SinR-like protein YP_003010403.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU07780 hypothetical protein YP_003010405.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: hypothetical protein YP_003010406.1 KEGG: bar:GBAA3002 hypothetical protein YP_003010407.1 PFAM: beta-lactamase; KEGG: pzu:PHZ_c2514 beta-lactamase class C YP_003010408.1 KEGG: pst:PSPTO_3544 hypothetical protein YP_003010409.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bsu:BSU29740 LacI family transcription regulator YP_003010411.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003010412.1 PFAM: Ig domain protein; sugar-binding domain protein; KEGG: bja:bll2087 hypothetical protein YP_003010413.1 PFAM: S-layer domain protein; KEGG: baa:BA_1454 amidase_2, N-acetylmuramoyl-L-alanine amidase YP_003010414.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein YP_003010415.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sme:SM_b20970 sugar uptake ABC transporter permease YP_003010416.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1119 lactose transporter (permease) YP_003010417.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3679 two-component response regulator YP_003010418.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: hypothetical protein YP_003010419.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1911 transmembrane lipoprotein YP_003010420.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1912 transmembrane lipoprotein YP_003010421.1 KEGG: hypothetical protein YP_003010422.1 KEGG: hypothetical protein YP_003010423.1 PFAM: glycoside hydrolase family 31; KEGG: alpha-glucosidases, family 31 of glycosyl hydrolases YP_003010424.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: par:Psyc_1446 LuxR family transcriptional regulator YP_003010425.1 TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; KEGG: bsu:BSU08110 acid-soluble spore protein H YP_003010426.1 KEGG: sme:SM_b20968 hypothetical protein YP_003010427.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH1909 two-component sensor histidine kinase YP_003010428.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bsu:BSU06960 hypothetical protein YP_003010429.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b20971 sugar uptake ABC transporter periplasmic solute-binding protein precursor YP_003010430.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sme:SM_b20970 sugar uptake ABC transporter permease YP_003010431.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sme:SM_b20969 sugar uptake ABC transporter permease YP_003010432.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: spe:Spro_1973 cryptic beta-D-galactosidase subunit alpha YP_003010433.1 PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH3482 multidrug-efflux transporter YP_003010434.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0483 AraC/XylS family transcriptional regulator YP_003010435.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003010436.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30170 hypothetical protein YP_003010437.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU30160 hypothetical protein YP_003010438.1 PFAM: glycoside hydrolase family 43; glycosyl hydrolase family 32 domain protein; KEGG: glycosyl hydrolase YP_003010439.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: nmn:NMCC_1216 MerR family transcriptional regulator YP_003010440.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mrd:Mrad2831_5502 short-chain dehydrogenase/reductase SDR YP_003010442.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003010443.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bsu:BSU40870 LacI family transcriptional regulator YP_003010444.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: pst:PSPTO_1741 phosphoglycolate phosphatase YP_003010445.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA4921 sensor histidine kinase YP_003010446.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA4920 DNA-binding response regulator YP_003010447.1 KEGG: baa:BA_1925 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: bacitracin resistance protein BacA YP_003010448.1 PFAM: hypothetical protein; KEGG: mfa:Mfla_1749 hypothetical protein YP_003010450.1 PFAM: acriflavin resistance protein; KEGG: baa:BA_0544 AcrB/AcrD/AcrF family YP_003010451.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: mxa:MXAN_6759 RNA polymerase sigma-E factor YP_003010452.1 KEGG: bha:BH0264 hypothetical protein YP_003010453.1 KEGG: afw:Anae109_2124 secretin/TonB short domain YP_003010456.1 PFAM: sulfatase; KEGG: bbr:BB2466 sulfatase YP_003010457.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer YP_003010458.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bha:BH2102 glutamate synthase operon transcriptional activator YP_003010459.1 PFAM: GerA spore germination protein; KEGG: baa:BA_1348 hypothetical protein YP_003010460.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: baa:BA_1347 hypothetical protein YP_003010461.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH1455 spore germination protein YP_003010463.1 PFAM: DoxX family protein; KEGG: baa:BA_1594 hypothetical protein YP_003010464.1 PFAM: alpha/beta hydrolase; KEGG: lpf:lpl1851 hypothetical protein YP_003010465.1 PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: esa:ESA_02983 hypothetical protein YP_003010466.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce4768 ABC-type transporter ATP-binding protein YP_003010467.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: scl:sce4769 ABC-type transporter permease YP_003010468.1 KEGG: scl:sce8959 monooxygenase YP_003010469.1 PFAM: NMT1/THI5 like domain protein; KEGG: scl:sce1416 ABC transporter substrate-binding protein YP_003010470.1 PFAM: Luciferase-like monooxygenase; KEGG: scl:sce8959 monooxygenase YP_003010471.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bha:BH0410 short chain dehydrogenase YP_003010472.1 PFAM: hypothetical protein; KEGG: bha:BH0411 hypothetical protein YP_003010473.1 PFAM: glycoside hydrolase family 43; KEGG: cja:CJA_0819 alpha-L-arabinfuranosidase, , abf43M YP_003010474.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: bha:BH0906 catalase YP_003010475.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0483 AraC/XylS family transcriptional regulator YP_003010476.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003010477.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_003010478.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0481 ABC transporter (permiase) YP_003010479.1 PFAM: xylose isomerase YP_003010481.1 KEGG: hypothetical protein YP_003010482.1 PFAM: glycosyl hydrolase family 88; KEGG: sde:Sde_0951 DNA-directed RNA polymerase, subunit alpha YP_003010483.1 PFAM: MgtC/SapB transporter; KEGG: bar:GBAA1979 SapB protein YP_003010484.1 PFAM: oxidoreductase; KEGG: met:M446_1313 oxidoreductase domain-containing protein YP_003010485.1 PFAM: VanZ family protein; KEGG: baa:BA_0084 hypothetical protein YP_003010486.1 PFAM: S-layer domain protein; NEAr transporter; SMART: NEAr transporter; KEGG: baa:BA_1644 SLH, S-layer homology domain YP_003010488.1 iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source YP_003010489.1 PFAM: NEAr transporter; SMART: NEAr transporter; KEGG: bha:BH3299 hypothetical protein YP_003010490.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA3261 DNA-binding response regulator YP_003010491.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bar:GBAA3260 sensor histidine kinase YP_003010492.1 PFAM: glycoside hydrolase family 31; KEGG: predicted protein YP_003010493.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rlt:Rleg2_5909 transcriptional regulator, AraC family YP_003010494.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3702 transcriptional regulator YP_003010495.1 PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase YP_003010496.1 PFAM: helix-turn-helix- domain containing protein AraC type; histidine kinase HAMP region domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU30150 hypothetical protein YP_003010497.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_003010498.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0481 ABC transporter (permiase) YP_003010499.1 KEGG: bsu:BSU07100 lipoprotein YP_003010500.1 PFAM: glycosyl hydrolase family 88; KEGG: bha:BH1120 hypothetical protein YP_003010501.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: smd:Smed_3499 NAD(P)H dehydrogenase (quinone) YP_003010502.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU35080 hypothetical protein YP_003010503.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mca:MCA0825 AraC family transcriptional regulator YP_003010504.1 catalyzes the cleavage of carbon-halogen bonds in aliphatic compounds forming a primary alcohol and a halide YP_003010505.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003010506.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30170 hypothetical protein YP_003010507.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU07100 lipoprotein YP_003010508.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003010509.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3678 two-component sensor histidine kinase YP_003010510.1 KEGG: hypothetical protein YP_003010511.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003010512.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA4721 TetR family transcriptional regulator YP_003010513.1 PFAM: aldo/keto reductase; KEGG: gur:Gura_3526 aldo/keto reductase YP_003010514.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003010515.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003010516.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003010517.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: sus:acid_2625 PA14 domain-containing protein YP_003010518.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU32590 hypothetical protein YP_003010519.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU32580 hypothetical protein YP_003010520.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: sus:acid_1398 coagulation factor 5/8 type domain-containing protein YP_003010521.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: asu:Asuc_0770 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003010522.1 PFAM: cupin; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003010523.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein YP_003010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003010525.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003010526.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30170 hypothetical protein YP_003010527.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: hypothetical protein YP_003010529.1 KEGG: hypothetical protein YP_003010531.1 PFAM: cell wall hydrolase SleB; copper amine oxidase domain protein; KEGG: bsu:BSU13820 hypothetical protein YP_003010532.1 KEGG: dal:Dalk_2422 transcriptional regulator, TetR family YP_003010533.1 PFAM: aminoglycoside phosphotransferase; KEGG: mex:Mext_1755 aminoglycoside phosphotransferase YP_003010534.1 TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bsu:BSU33440 hypothetical protein YP_003010535.1 hemoprotein; NADPH dependent; with the subunit alpha (a flavoprotein) catalyzes the reduction of sulfite to sulfide YP_003010536.1 PFAM: ROK family protein; KEGG: bha:BH0700 transcriptional repressor of the xylose operon YP_003010537.1 KEGG: sfu:Sfum_3568 hypothetical protein YP_003010538.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:acid_3882 short-chain dehydrogenase/reductase SDR YP_003010539.1 PFAM: PP-loop domain protein; ExsB family protein; KEGG: gbm:Gbem_0361 PP-loop domain protein YP_003010540.1 PFAM: carbohydrate kinase FGGY; KEGG: bha:BH2676 gluconate kinase YP_003010541.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: dat:HRM2_21010 PurE YP_003010542.1 PFAM: high-affinity nickel-transporter; KEGG: aba:acid345_0923 high-affinity nickel-transporter YP_003010543.1 PFAM: glycoside hydrolase family 18; S-layer domain protein; Fibronectin type III domain protein; SMART: chitinase II; Fibronectin type III domain protein; KEGG: bha:BH0916 chitinase YP_003010544.1 KEGG: ank:AnaeK_4022 daunorubicin resistance ABC transporter ATPase; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003010545.1 PFAM: ABC transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter YP_003010546.1 PFAM: monooxygenase FAD-binding; KEGG: gdj:Gdia_2837 monooxygenase FAD-binding YP_003010547.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0483 AraC/XylS family transcriptional regulator YP_003010548.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0482 lipoprotein YP_003010549.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0482 lipoprotein YP_003010550.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003010551.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0481 ABC transporter (permiase) YP_003010553.1 PFAM: helix-turn-helix HxlR type; KEGG: azo:azo3515 transcriptional regulatory protein YP_003010554.1 PFAM: major facilitator superfamily MFS_1; KEGG: baa:BA_0123 sugar_tr, sugar (and other) transporter YP_003010555.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: lhk:LHK_00494 AraC family transcriptional regulator protein YP_003010556.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, multiple sugar transporter permease YP_003010557.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003010558.1 KEGG: hypothetical protein YP_003010559.1 KEGG: bha:BH2991 phosphate ABC transporter ATP-binding protein; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003010560.1 TIGRFAM: phosphate ABC transporter inner membrane protein PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU24970 phosphate ABC transporter (permease) YP_003010561.1 TIGRFAM: phosphate ABC transporter inner membrane protein PstC; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU24980 phosphate ABC transporter (permease) YP_003010562.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU24990 phosphate ABC transporter (binding protein) YP_003010563.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_003010564.1 PFAM: DinB family protein; KEGG: bsu:BSU12410 hypothetical protein YP_003010567.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: scl:sce6697 transcriptional regulator YP_003010568.1 PFAM: ABC transporter; KEGG: bha:BH3978 ABC transporter (permease) YP_003010569.1 KEGG: mes:Meso_2101 daunorubicin resistance ABC transporter ATPase; TIGRFAM: daunorubicin resistance ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003010570.1 KEGG: bha:BH3244 general stress protein YP_003010571.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; KEGG: bha:BH0529 RNA polymerase sigma factor SigB YP_003010572.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bha:BH0528 serine-protein kinase RsbW YP_003010573.1 PFAM: protein of unknown function DUF948; KEGG: bha:BH3245 general stress protein YP_003010574.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; CHASE3 domain protein; GAF domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: baa:BA_1564 REC, cheY-homologous receiver domain YP_003010575.1 KEGG: baa:BA_1563 CheR methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_003010576.1 PFAM: ROK family protein; KEGG: bha:BH2758 transcriptional repressor of the xylose operon YP_003010577.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: sus:acid_0804 xylulokinase YP_003010578.1 PFAM: glycosyl hydrolase family 32; SMART: glycoside hydrolase family 32; KEGG: hypothetical protein YP_003010580.1 PFAM: hypothetical protein; KEGG: gur:Gura_0944 helix-turn-helix, type 11 domain-containing protein YP_003010581.1 KEGG: pha:PSHAa2988 hypothetical protein YP_003010582.1 KEGG: pha:PSHAa2988 hypothetical protein YP_003010584.1 PFAM: protein of unknown function DUF87; KEGG: pcr:Pcryo_0920 ATP-binding protein YP_003010585.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: bar:GBAA2314 hypothetical protein YP_003010588.1 KEGG: rlt:Rleg2_1513 conserved hypothetical protein-like protein YP_003010590.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator YP_003010591.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0631 hypothetical protein YP_003010593.1 KEGG: atc:AGR_pAT_594 hypothetical protein YP_003010594.1 PFAM: glycoside hydrolase; cellulosome anchoring protein cohesin region; sugar-binding domain protein; KEGG: ypy:YPK_3072 glycoside hydrolase family 3 protein YP_003010595.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003010596.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bha:BH3840 sugar ABC transporter (sugar-binding protein) YP_003010597.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3841 two-component sensor histidine kinase YP_003010598.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH3842 two-component response regulator YP_003010599.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3845 ABC transporter (substrate-binding protein) YP_003010600.1 KEGG: vco:VC0395_A0942 D-galactose/D-glucose ABC transporter periplasmic D-galactose/D-glucose-binding protein YP_003010601.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ecy:ECSE_2416 methyl-galactoside ABC transporter ATP-binding component YP_003010602.1 PFAM: inner-membrane translocator; KEGG: hap:HAPS_0444 galactose ABC transporter inner membrane component YP_003010603.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bsu:BSU04720 serine-protein kinase RsbW YP_003010604.1 TIGRFAM: anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: bha:BH0527 positive regulator of sigma-B activity (anti-anti-sigma factor) YP_003010606.1 PFAM: response regulator receiver; stage II sporulation E family protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: baa:BA_1562 PP2C_SIG, sigma factor PP2C-like phosphatases YP_003010607.1 KEGG: baa:BA_1554 hypothetical protein YP_003010608.1 PFAM: protein of unknown function DUF1328; KEGG: pmy:Pmen_0080 hypothetical protein YP_003010609.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pca:Pcar_2333 glycerophosphodiester phosphodiesterase, cytosolic YP_003010610.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1077 glycerol-3-phosphate ABC transporter (permease) YP_003010611.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: baa:BA_1147 binding-protein-dependent transport systems inner membrane component YP_003010612.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1079 glycerol-3-phosphate ABC transporter (glycerol-3-phosphate binding protein) YP_003010613.1 PFAM: alpha/beta hydrolase fold; phospholipase/carboxylesterase; KEGG: aba:acid345_3365 alpha/beta hydrolase YP_003010614.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bar:GBAA4895 hypothetical protein YP_003010615.1 KEGG: shl:Shal_0626 hypothetical protein YP_003010616.1 KEGG: bha:BH3319 hypothetical protein YP_003010617.1 PFAM: LmbE family protein; KEGG: bar:GBAA3524 hypothetical protein YP_003010618.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase; KEGG: bsu:BSU04520 hypothetical protein YP_003010619.1 KEGG: bha:BH0640 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase YP_003010620.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate YP_003010621.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU07400 hypothetical protein YP_003010622.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc2229 NADH dehydrogenase, membrane flavoprotein FAD NAD ubiquinone electron transport oxidoreductase YP_003010623.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bha:BH0672 RNA polymerase sigma factor SigJ YP_003010624.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: bha:BH2165 hypothetical protein YP_003010625.1 PFAM: oxidoreductase; homoserine dehydrogenase NAD-binding; oxidoreductase domain; KEGG: bcs:BCAN_A2095 hypothetical protein YP_003010626.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_4467 AraC family transcriptional regulator YP_003010627.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU07010 hypothetical protein YP_003010628.1 PFAM: major facilitator superfamily MFS_1; KEGG: baa:BA_1595 hypothetical protein YP_003010629.1 KEGG: baa:BA_0557 hypothetical protein YP_003010630.1 TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: hypothetical protein YP_003010631.1 PFAM: carbohydrate kinase FGGY; KEGG: mxa:MXAN_2879 xylulokinase YP_003010632.1 PFAM: major facilitator superfamily MFS_1; KEGG: hypothetical protein YP_003010633.1 PFAM: class II aldolase/adducin family protein; KEGG: xcv:XCV4349 L-fuculose-phosphate aldolase YP_003010634.1 PFAM: aminotransferase class-III; KEGG: xcv:XCV4348 glutamate-1-semialdehyde 2,1-aminomutase YP_003010635.1 KEGG: smt:Smal_2109 protein tyrosine/serine phosphatase YP_003010636.1 PFAM: metallophosphoesterase; KEGG: atc:AGR_C_4081 hypothetical protein YP_003010637.1 PFAM: GntR family transcriptional regulator; GntR domain protein; SMART: GntR family transcriptional regulator; KEGG: bbr:BB3957 transcriptional regulator YP_003010638.1 PFAM: GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bha:BH2647 GntR family transcriptional regulator YP_003010642.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH2648 ABC transporter ATP-binding protein YP_003010643.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bsu:BSU05060 AsnC/Lrp family transcriptional regulator YP_003010644.1 KEGG: dal:Dalk_0875 beta-lactamase YP_003010645.1 PFAM: alpha/beta hydrolase fold; KEGG: asa:ASA_2572 beta-ketoadipate enol-lactone hydrolase YP_003010646.1 KEGG: mxa:MXAN_1712 hypothetical protein YP_003010647.1 PFAM: SNF2-related protein; zinc finger SWIM domain protein; SNF2 helicase associated domain protein ; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: bar:GBAA1804 helicase YP_003010648.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bha:BH4044 MarR family transcriptional regulator YP_003010649.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: geo:Geob_0968 alcohol dehydrogenase GroES domain protein YP_003010650.1 PFAM: glycoside hydrolase family 43; KEGG: sde:Sde_0822 alpha-L-arabinofuranosidase YP_003010651.1 PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0587 hypothetical protein YP_003010652.1 PFAM: glycosyl transferase family 2; KEGG: baa:BA_1759 glycos_transf_2, glycosyl transferase YP_003010653.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMa2133 hypothetical protein YP_003010654.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: similar to phytanoyl-CoA dioxygenase, peroxisomal precursor (phytanoyl-CoA alpha-hydroxylase) (PhyH) (Phytanic acid oxidase) YP_003010655.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mno:Mnod_5531 transcriptional regulator, TrmB YP_003010656.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter YP_003010657.1 PFAM: protein of unknown function DUF1697; KEGG: bar:GBAA2742 hypothetical protein YP_003010658.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bha:BH0800 dehydrogenase/reductase family protein YP_003010660.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU38310 hypothetical protein YP_003010661.1 PFAM: LrgA family protein; KEGG: bsu:BSU38320 holin-like protein YP_003010662.1 PFAM: LrgB family protein; KEGG: bsu:BSU38330 hypothetical protein YP_003010663.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bsu:BSU34000 hypothetical protein YP_003010664.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: xcv:XCV2619 hypothetical protein YP_003010665.1 PFAM: alpha/beta hydrolase fold; KEGG: pae:PA3226 hydrolase YP_003010666.1 PFAM: DNA polymerase beta domain protein region; KEGG: bbt:BBta_2474 hypothetical protein YP_003010667.1 KEGG: scl:sce7394 hypothetical protein; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003010669.1 KEGG: bha:BH1891 hypothetical protein YP_003010670.1 PFAM: Domain of unknown function DUF1801; KEGG: bsu:BSU05210 hypothetical protein YP_003010671.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: baa:BA_2467 hypothetical protein YP_003010672.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003010673.1 catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides YP_003010674.1 KEGG: bha:BH1908 glucan 1,4-beta-glucosidase; PFAM: glycoside hydrolase; carbohydrate binding family 6; SMART: cellulose binding type IV YP_003010675.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH1909 two-component sensor histidine kinase YP_003010676.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1910 two-component response regulator YP_003010677.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1911 transmembrane lipoprotein YP_003010678.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1912 transmembrane lipoprotein YP_003010679.1 KEGG: bha:BH1913 hypothetical protein YP_003010680.1 KEGG: bha:BH0842 hypothetical protein YP_003010682.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003010683.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3679 two-component response regulator YP_003010684.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003010685.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: scl:sce3058 sugar ABC transporter permease YP_003010686.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_5582 ABC transporter membrane spanning protein (galacturonic acid) YP_003010687.1 KEGG: mes:Meso_2301 hypothetical protein YP_003010688.1 PFAM: integrase; KEGG: glo:Glov_3714 integrase catalytic region YP_003010689.1 PFAM: transposase IS3/IS911 family protein; KEGG: prw:PsycPRwf_1477 transposase IS3/IS911 family protein YP_003010690.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_C0820 hypothetical protein YP_003010691.1 PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pfl:PFL_2590 IolD protein YP_003010692.1 PFAM: xylose isomerase; KEGG: hsm:HSM_0434 xylose isomerase domain-containing protein YP_003010693.1 PFAM: PfkB domain protein; KEGG: bar:GBAA2512 myo-inositol catabolism protein IolC YP_003010694.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bha:BH2312 methylmalonate-semialdehyde dehydrogenase YP_003010695.1 PFAM: oxidoreductase; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: bar:GBAA2511 oxidoreductase, NAD-binding YP_003010696.1 PFAM: myo-inositol catabolism IolB domain protein; KEGG: mlo:mll4976 hypothetical protein YP_003010697.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bsu:BSU10840 LacI family transcription regulator YP_003010699.1 PFAM: GntR family transcriptional regulator; aminotransferase class I and II; SMART: GntR family transcriptional regulator; KEGG: bar:GBAA3062 GntR family transcriptional regulator YP_003010700.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; transcriptional regulator TrmB; hypothetical protein; KEGG: scl:sce5747 rrf2 family protein YP_003010701.1 KEGG: sus:acid_7033 Zn-dependent hydrolase of the beta-lactamase fold-like protein YP_003010702.1 TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; KEGG: rsk:RSKD131_3199 ammonia monooxygenase YP_003010703.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NmrA family protein; KEGG: psb:Psyr_5111 dTDP-glucose 4,6-dehydratase YP_003010704.1 PFAM: S-layer domain protein; Fibronectin type III domain protein; coagulation factor 5/8 type domain protein; SMART: Fibronectin type III domain protein; KEGG: sde:Sde_0054 adenylyl cyclase class-3/4/guanylyl cyclase YP_003010705.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: pla:Plav_2390 activator of HSP90 ATPase 1 family protein YP_003010707.1 KEGG: mxa:MXAN_0975 hypothetical protein YP_003010709.1 PFAM: GerA spore germination protein; KEGG: bha:BH1934 spore germination protein KA YP_003010710.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH1935 spore germination protein KC YP_003010711.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU03720 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003010712.1 PFAM: pentapeptide repeat protein; KEGG: bpy:Bphyt_2842 pentapeptide repeat protein YP_003010713.1 KEGG: lch:Lcho_0859 periplasmic component of the Tol biopolymer transporter YP_003010714.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: baa:BA_2246 HTH_1, bacterial regulatory helix-turn-helix protein, LysR family YP_003010715.1 PFAM: extracellular solute-binding protein family 1; KEGG: baa:BA_2248 bacterial extracellular solute-binding protein YP_003010716.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: kpe:KPK_2471 ABC transporter permease YP_003010717.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mes:Meso_4455 ABC transporter YP_003010724.1 PFAM: Cupin domain protein; KEGG: baa:BA_2254 DSBH, double stranded beta helix domain involved in carbohydrate binding and protein-protein YP_003010725.1 KEGG: bsu:BSU18670 hypothetical protein; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein YP_003010726.1 PFAM: pirin; KEGG: lpn:lpg2286 pirin YP_003010727.1 PFAM: Heparinase II/III YP_003010728.1 PFAM: glycosyl hydrolase family 88; KEGG: bha:BH2054 unsaturated glucuronyl hydrolase YP_003010729.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sea:SeAg_B3892 transcriptional regulator YP_003010730.1 PFAM: protein of unknown function DUF1680; KEGG: aca:ACP_1269 Tat pathway signal sequence domain protein YP_003010731.1 KEGG: sus:acid_4041 heparinase II/III family protein YP_003010732.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003010733.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003010734.1 PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_4017 extracellular solute-binding protein YP_003010735.1 KEGG: bha:BH0796 hypothetical protein YP_003010736.1 KEGG: ara:Arad_9990 hypothetical protein YP_003010737.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003010738.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003010739.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003010740.1 PFAM: S-layer domain protein; Heparinase II/III family protein; KEGG: hypothetical protein YP_003010741.1 KEGG: eca:ECA3785 hypothetical protein YP_003010742.1 PFAM: S-layer domain protein; cellulosome anchoring protein cohesin region; KEGG: hypothetical protein YP_003010743.1 PFAM: glycoside hydrolase; cellulosome anchoring protein cohesin region; KEGG: pin:Ping_0139 glycoside hydrolase family 3 protein YP_003010745.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003010746.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003010747.1 PFAM: extracellular solute-binding protein family 1; KEGG: bcs:BCAN_B0755 extracellular solute-binding protein YP_003010748.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3689 sugar transporter (permease) YP_003010749.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_4625 sugar ABC transporter YP_003010750.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: bar:GBAA4267 phosphoenolpyruvate-protein phosphotransferase YP_003010751.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: sdn:Sden_1818 phosphotransferase system, HPr YP_003010752.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: baa:BA_1071 phosphotransferase system, EIIC YP_003010753.1 TIGRFAM: PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; KEGG: baa:BA_0418 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YP_003010754.1 PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: bar:GBAA4270 transcription antiterminator GlcT YP_003010756.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sat:SYN_02652 CDP-4-dehydro-6-deoxy-D-gulose 4-reductase YP_003010757.1 PFAM: Luciferase-like monooxygenase; KEGG: sme:SM_b21003 oxidoreductase protein YP_003010758.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mmw:Mmwyl1_0168 hypothetical protein YP_003010759.1 PFAM: oxidoreductase; semialdehyde dehydrogenase NAD - binding; homoserine dehydrogenase NAD-binding; oxidoreductase domain; KEGG: mmw:Mmwyl1_3508 oxidoreductase domain-containing protein YP_003010760.1 PFAM: NUDIX hydrolase; KEGG: abo:ABO_0788 MutT/NUDIX family protein YP_003010761.1 KEGG: bar:GBAA0049 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003010762.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU32600 hypothetical protein YP_003010763.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2224 maltose transporter (permease) YP_003010764.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mlo:mlr7001 ABC transporter permease YP_003010765.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003010766.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003010767.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bsu:BSU38540 involved in lipoteichoic acid biosynthesis YP_003010768.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: msu:MS1385 SoxR protein YP_003010769.1 PFAM: GCN5-related N-acetyltransferase; KEGG: lpc:LPC_2298 acetyltransferase YP_003010770.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: bsu:BSU02330 hypothetical protein YP_003010772.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: bsu:BSU02330 hypothetical protein YP_003010773.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bha:BH2712 LysR family transcriptional regulator YP_003010774.1 KEGG: lpf:lpl2222 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase YP_003010775.1 PFAM: integral membrane protein TerC; KEGG: reh:H16_A2702 membrane protein TerC, possibly involved in tellurium resistance YP_003010776.1 PFAM: FG-GAP repeat protein; Fibronectin type III domain protein; KEGG: bsu:BSU07050 hypothetical protein YP_003010777.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: bha:BH2299 aconitate hydratase YP_003010778.1 PFAM: Luciferase-like monooxygenase; KEGG: bsu:BSU33980 hypothetical protein YP_003010779.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity YP_003010780.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: bar:GBAA3130 small, acid-soluble spore protein YP_003010781.1 KEGG: bha:BH2709 hypothetical protein YP_003010782.1 PFAM: ABC transporter; KEGG: bha:BH2708 ABC transporter YP_003010783.1 PFAM: Spore coat protein CotH; KEGG: dal:Dalk_4022 spore coat protein CotH YP_003010784.1 KEGG: dat:HRM2_21160 hypothetical protein YP_003010785.1 KEGG: scl:sce4691 hypothetical protein YP_003010786.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: pca:Pcar_3082 two component sensor histidine kinase YP_003010787.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: psa:PST_3390 transcriptional activator CopR YP_003010788.1 PFAM: beta-lactamase; KEGG: bsu:BSU29410 metal-dependent hydrolase YP_003010789.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bsu:BSU08240 hypothetical protein YP_003010790.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: bha:BH2659 hypothetical protein YP_003010791.1 PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; KEGG: bar:GBAA2826 manganese-dependent inorganic pyrophosphatase YP_003010792.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_3215 ActC YP_003010793.1 PFAM: NLP/P60 protein; KEGG: sbm:Shew185_0058 NLP/P60 protein YP_003010794.1 PFAM: regulatory protein MarR; iron dependent repressor; SMART: regulatory protein MarR; iron dependent repressor; KEGG: hypothetical protein YP_003010795.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: scl:sce5644 carbohydrate ABC transporter YP_003010796.1 PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: scl:sce5645 carbohydrate ABC transporter YP_003010797.1 KEGG: hypothetical protein YP_003010800.1 KEGG: bmj:BMULJ_04405 NUDIX hydrolase YP_003010802.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_1474 GCN5-related N-acetyltransferase YP_003010803.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: abc:ACICU_01259 HAD superfamily hydrolase YP_003010804.1 PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_5582 extracellular solute-binding protein YP_003010805.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_5709 ABC transporter membrane spanning protein (sugar) YP_003010806.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: oan:Oant_2483 binding-protein-dependent transport systems inner membrane component YP_003010807.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003010808.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2728 two-component response regulator YP_003010809.1 PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_5582 extracellular solute-binding protein YP_003010810.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02565 acetyltransferase protein YP_003010811.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003010812.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, multiple sugar transporter permease YP_003010813.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30170 hypothetical protein YP_003010814.1 PFAM: glycosyl hydrolase family 88; KEGG: avi:Avi_7344 unsaturated glucuronyl hydrolase YP_003010815.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0483 AraC/XylS family transcriptional regulator YP_003010816.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3560 AlgQ1, multiple sugar transporter substrate-binding protein YP_003010817.1 TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: bha:BH0965 hypothetical protein YP_003010819.1 PFAM: cytochrome C oxidase subunit II; KEGG: bha:BH2028 hypothetical protein YP_003010821.1 PFAM: stress responsive alpha-beta barrel domain protein; KEGG: gme:Gmet_0507 hypothetical protein YP_003010823.1 PFAM: protein of unknown function DUF86; KEGG: bha:BH3430 hypothetical protein YP_003010824.1 PFAM: hypothetical protein; KEGG: bha:BH3429 hypothetical protein YP_003010825.1 KEGG: met:M446_2544 methyl-accepting chemotaxis sensory transducer YP_003010826.1 KEGG: bha:BH3244 general stress protein YP_003010827.1 KEGG: bsu:BSU28390 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003010828.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: baa:BA_1329 MarR family YP_003010829.1 PFAM: major facilitator superfamily MFS_1; KEGG: ara:Arad_10017 tetracycline efflux transporter protein YP_003010830.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: bha:BH1603 gamma-D-glutamyl-L-diamino acid endopeptidase I YP_003010832.1 PFAM: HesB/YadR/YfhF-family protein; KEGG: aha:AHA_3517 iron-sulfur cluster insertion protein ErpA YP_003010833.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: bsu:BSU15050 hypothetical protein YP_003010834.1 PFAM: sulfatase; KEGG: bsu:BSU24840 hypothetical protein YP_003010835.1 PFAM: RNA methylase; KEGG: bha:BH1771 hypothetical protein YP_003010836.1 PFAM: O-methyltransferase family 3; KEGG: cvi:CV_0193 O-methyltransferase YP_003010840.1 PFAM: hypothetical protein; SMART: Ig domain protein group 2 domain protein; PKD domain containing protein; KEGG: bam:Bamb_4575 hemagluttinin domain-containing protein YP_003010841.1 PFAM: type II secretion system protein E; general secretory system II protein E domain protein; SMART: ATPase AAA; KEGG: aba:acid345_1392 type II secretion system protein E YP_003010842.1 KEGG: tcx:Tcr_1750 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA YP_003010843.1 PFAM: type II secretion system protein; KEGG: pca:Pcar_2147 general protein secretion protein YP_003010844.1 KEGG: aca:ACP_2963 prepilin-type N-terminal cleavage/methylation domain protein YP_003010845.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: bsu:BSU28070 DNA-binding protein YP_003010846.1 PFAM: fimbrial assembly family protein; KEGG: pne:Pnec_0733 fimbrial assembly family protein YP_003010848.1 KEGG: bha:BH1202 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D) YP_003010849.1 KEGG: bha:BH1203 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase YP_003010850.1 KEGG: bsu:BSU10140 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase YP_003010851.1 KEGG: bar:GBAA1855 hypothetical protein YP_003010852.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: vha:VIBHAR_06395 lycerophosphoryl diester phosphodiesterase YP_003010853.1 PFAM: protein of unknown function DUF92 transmembrane; KEGG: bha:BH1418 hypothetical protein YP_003010854.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bar:GBAA3701 glyoxalase family protein YP_003010855.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: xcc:XCC1789 hypothetical protein YP_003010856.1 PFAM: cyclase; KEGG: dal:Dalk_1541 cyclase YP_003010857.1 KEGG: baa:BA_0256 hypothetical protein YP_003010858.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: baa:BA_1742 peptidase family M3 YP_003010861.1 KEGG: pla:Plav_2858 hypothetical protein YP_003010862.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bar:GBAA5115 cold shock protein CspD YP_003010863.1 PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: bha:BH2276 hypothetical protein YP_003010864.1 KEGG: bha:BH3188 hypothetical protein YP_003010865.1 KEGG: sat:SYN_01806 cytoplasmic protein YP_003010866.1 KEGG: bha:BH3164 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_003010867.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bsu:BSU34820 hypothetical protein YP_003010868.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: baa:BA_2459 response_reg, response regulator receiver domain YP_003010869.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: baa:BA_2460 HATPase_c, histidine kinase-, DNA gyrase B-, phytochrome-like ATPase YP_003010870.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA4921 sensor histidine kinase YP_003010871.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA4920 DNA-binding response regulator YP_003010872.1 PFAM: acriflavin resistance protein; KEGG: baa:BA_0544 AcrB/AcrD/AcrF family YP_003010873.1 KEGG: afr:AFE_2171 GTP-binding protein YP_003010875.1 PFAM: protein of unknown function DUF161; KEGG: baa:BA_0128 DUF161, uncharacterized BCR, YitT family COG1284 YP_003010876.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: baa:BA_0817 DEAD/DEAH box helicase YP_003010877.1 PFAM: protein of unknown function DUF624; KEGG: bha:BH1907 hypothetical protein YP_003010878.1 KEGG: bha:BH3147 hypothetical protein YP_003010879.1 PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: bsu:BSU29490 thiol peroxidase YP_003010880.1 PFAM: rhomboid family protein; KEGG: bha:BH0517 hypothetical protein YP_003010881.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bha:BH2102 glutamate synthase operon transcriptional activator YP_003010882.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: bsu:BSU31310 hypothetical protein YP_003010883.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bsu:BSU09560 hypothetical protein YP_003010884.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bha:BH3834 ammonium transporter YP_003010885.1 PFAM: protein of unknown function DUF294 nucleotidyltransferase KEGG: tgr:Tgr7_1025 cyclic nucleotide-binding protein YP_003010886.1 KEGG: bha:BH3832 hypothetical protein; TIGRFAM: DNA polymerase III, subunit epsilon; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease YP_003010887.1 KEGG: wsu:WS1005 hypothetical protein YP_003010888.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU10980 hypothetical protein YP_003010889.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; thioredoxin domain; redoxin; KEGG: bar:GBAA1779 thioredoxin family protein YP_003010890.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; KEGG: gsu:GSU1798 alpha-isopropylmalate/homocitrate synthase family transferase YP_003010891.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: bsu:BSU23870 DNA polymerase IV YP_003010892.1 KEGG: bha:BH2357 ferredoxin [4Fe-4S] YP_003010894.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_003010895.1 PFAM: RelA/SpoT domain protein; KEGG: baa:BA_1747 hypothetical protein YP_003010896.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bsu:BSU12370 LacI family transcription regulator YP_003010897.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: sde:Sde_0508 hypothetical protein YP_003010898.1 PFAM: glycosidase PH1107-related; KEGG: sde:Sde_0507 hypothetical protein YP_003010899.1 PFAM: acetyl xylan esterase; KEGG: bha:BH3326 acetylxylan esterase (cephalosporin-C deacetylase) YP_003010900.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU40010 hypothetical protein YP_003010901.1 TIGRFAM: YhgE/Pip C-terminal domain protein; PFAM: ABC-2 type transporter; KEGG: baa:BA_0306 hypothetical protein YP_003010902.1 TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bar:GBAA1591 xanthine phosphoribosyltransferase YP_003010903.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: NADH oxidase lateral transfer candidate YP_003010904.1 PFAM: Fmu (Sun) domain protein; KEGG: efe:EFER_1239 RNA AdoMet-dependent methyltransferase YP_003010905.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bha:BH3273 16S pseudouridylate synthase YP_003010906.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: bsu:BSU39550 hypothetical protein YP_003010908.1 PFAM: Fmu (Sun) domain protein; KEGG: vha:VIBHAR_02352 rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_003010909.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: bar:GBAA2475 DEAD-box ATP dependent DNA helicase YP_003010910.1 KEGG: bar:GBAA4779 hypothetical protein YP_003010911.1 KEGG: bsu:BSU18050 hypothetical protein YP_003010912.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rce:RC1_3937 acetyltransferase, GNAT family YP_003010913.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bur:Bcep18194_A4052 lysine exporter protein LysE/YggA YP_003010914.1 KEGG: gamma-adaptin 1 YP_003010915.1 KEGG: baa:BA_1640 biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase YP_003010916.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: bar:GBAA3623 molybdopterin biosynthesis protein MoeA YP_003010917.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bsu:BSU03300 assimilatory nitrite reductase (subunit) YP_003010918.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: bsu:BSU03310 assimilatory nitrate reductase (catalytic subunit) YP_003010919.1 KEGG: gur:Gura_3370 formate dehydrogenase family accessory protein FdhD YP_003010920.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mes:Meso_1561 molybdopterin-guanine dinucleotide biosynthesis protein B YP_003010922.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bar:GBAA4223 sporulation kinase B YP_003010923.1 KEGG: bcj:BCAM1529 hydrolase YP_003010924.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: geo:Geob_2484 MarR family transcriptional regulator YP_003010925.1 TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; citrate transporter; KEGG: bsu:BSU05340 hypothetical protein YP_003010926.1 KEGG: bha:BH2998 arsenate reductase; TIGRFAM: arsenate reductase (thioredoxin); PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_003010927.1 KEGG: baa:BA_2118 hypothetical protein YP_003010928.1 KEGG: baa:BA_2119 hypothetical protein YP_003010929.1 PFAM: glutathionylspermidine synthase; KEGG: bar:GBAA1602 hypothetical protein YP_003010930.1 PFAM: protein of unknown function DUF350; KEGG: baa:BA_2121 hypothetical protein YP_003010931.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_003010932.1 may be involved in regulation of competence genes YP_003010933.1 KEGG: pmr:PMI0120 competence protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: DNA-binding protein YP_003010934.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol YP_003010935.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: geo:Geob_2673 dCMP deaminase YP_003010936.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase; KEGG: bsu:BSU25570 integral membrane protein YP_003010937.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bha:BH0263 RNA polymerase sigma factor SigW YP_003010938.1 KEGG: hypothetical protein YP_003010939.1 TIGRFAM: DNA polymerase III subunit delta; PFAM: DNA polymerase III delta; KEGG: bha:BH1337 DNA polymerase III subunit delta YP_003010940.1 TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: bha:BH1339 30S ribosomal protein S20 YP_003010941.1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination YP_003010942.1 TIGRFAM: stage II sporulation protein P; PFAM: stage II sporulation P family protein; KEGG: bar:GBAA2068 stage II sporulation protein P YP_003010944.1 TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding; KEGG: bha:BH1342 GTP-binding protein LepA YP_003010945.1 KEGG: bha:BH1343 coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003010946.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sus:acid_0725 N-acetylglutamate synthase YP_003010947.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: negative regulator of class I heat shock protein; KEGG: bha:BH1344 heat-inducible transcription repressor YP_003010948.1 PFAM: GrpE protein; KEGG: bha:BH1345 heat-shock protein (activation of DnaK) YP_003010949.1 TIGRFAM: chaperone protein DnaK; PFAM: heat shock protein 70; KEGG: bha:BH1346 molecular chaperone DnaK YP_003010950.1 KEGG: bha:BH1348 heat-shock protein (activation of DnaK); TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein YP_003010953.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; methyltransferase small; KEGG: bar:GBAA4537 ribosomal protein L11 methyltransferase YP_003010954.1 PFAM: peptidase M50; KEGG: bsu:BSU37530 hypothetical protein YP_003010955.1 PFAM: protein of unknown function DUF558; KEGG: bha:BH1350 hypothetical protein YP_003010956.1 KEGG: bha:BH1351 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004 ; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003010957.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_4891 NUDIX family hydrolase YP_003010958.1 PFAM: Na+/Picotransporter; KEGG: bha:BH1353 hypothetical protein YP_003010959.1 SMART: PUA domain containing protein; KEGG: gme:Gmet_0845 SAM-dependent methyltransferase YP_003010961.1 TIGRFAM: ATP-dependent nuclease subunit B; KEGG: baa:BA_1688 UvrD-helicase, UvrD/REP helicase YP_003010962.1 TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase; KEGG: bsu:BSU10630 ATP-dependent deoxyribonuclease (subunit A) YP_003010964.1 KEGG: bha:BH1171 hypothetical protein YP_003010965.1 PFAM: histidine triad (HIT) protein; KEGG: mmw:Mmwyl1_2991 histidine triad (HIT) protein YP_003010966.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_003010967.1 KEGG: bha:BH1355 hypothetical protein YP_003010968.1 PFAM: protein of unknown function DUF107; KEGG: bha:BH1356 hypothetical protein YP_003010969.1 PFAM: band 7 protein; KEGG: bsu:BSU25380 hypothetical protein YP_003010970.1 KEGG: hypothetical LOC615858 YP_003010971.1 TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: bha:BH1359 hypothetical protein YP_003010972.1 TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD; KEGG: bha:BH1360 stage IV sporulation protein YP_003010973.1 PFAM: PhoH family protein; KEGG: bha:BH1361 phosphate starvation-induced protein YP_003010974.1 KEGG: bha:BH1362 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003010975.1 PFAM: protein of unknown function UPF0054; KEGG: bar:GBAA4527 metalloprotease YP_003010976.1 PFAM: diacylglycerol kinase; KEGG: bar:GBAA4526 diacylglycerol kinase YP_003010977.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; Cytidine and deoxycytidylate deaminase zinc-binding domain protein; KEGG: bcm:Bcenmc03_6717 cytidine deaminase YP_003010978.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; protein synthesis factor GTP-binding; KEGG: bsu:BSU25290 GTP-binding protein Era YP_003010980.1 TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O RecO; KEGG: bha:BH1369 DNA repair protein RecO YP_003010981.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_003010982.1 KEGG: bha:BH1371 glycyl-tRNA synthetase subunit beta; TIGRFAM: glycyl-tRNA synthetase subunit beta YP_003010983.1 PFAM: protein of unknown function DUF299; KEGG: bha:BH1373 hypothetical protein YP_003010984.1 PFAM: protein of unknown function DUF188; KEGG: bha:BH1374 hypothetical protein YP_003010985.1 KEGG: bsu:BSU25210 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_003010986.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; Bacterio-opsin activator HTH domain protein; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: bha:BH1376 RNA polymerase sigma factor RpoD YP_003010987.1 KEGG: bha:BH1377 hypothetical protein YP_003010988.1 PFAM: protein of unknown function DUF633; KEGG: bar:GBAA4513 hypothetical protein YP_003010989.1 PFAM: protein of unknown function DUF34; KEGG: bha:BH1380 hypothetical protein YP_003010990.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bha:BH1491 protease YP_003010991.1 KEGG: baa:BA_2011 hypothetical protein YP_003010992.1 PFAM: protein of unknown function DUF1540; KEGG: bha:BH1398 hypothetical protein YP_003010993.1 KEGG: bha:BH1400 hypothetical protein YP_003010994.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU15340 hypothetical protein YP_003010995.1 KEGG: hypothetical protein YP_003010996.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: bsu:BSU21980 hypothetical protein YP_003010997.1 KEGG: bsu:BSU33450 hypothetical protein YP_003010998.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003010999.1 KEGG: mes:Meso_0235 hypothetical protein YP_003011000.1 KEGG: bar:GBAA5123 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase all-beta; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003011001.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: bha:BH1087 glucose-1-phosphate adenylyltransferase YP_003011002.1 TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: bha:BH1086 required for glycogen biosynthesis YP_003011003.1 KEGG: bar:GBAA5120 glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1 YP_003011004.1 PFAM: glycoside hydrolase 15-related; KEGG: afw:Anae109_3332 carbohydrate-binding family 6 protein YP_003011005.1 KEGG: bsu:BSU10680 spore germination protein YP_003011006.1 KEGG: bsu:BSU10690 spore germination protein YP_003011007.1 KEGG: baa:BA_1694 spore germination protein YP_003011008.1 KEGG: bsu:BSU10710 spore germination protein YP_003011009.1 KEGG: bsu:BSU10720 spore germination protein YP_003011013.1 PFAM: ferric-uptake regulator; KEGG: bha:BH1396 FUR family transcriptional regulator YP_003011014.1 PFAM: protein of unknown function DUF37; KEGG: apa:APP7_2028 hypothetical protein YP_003011015.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase subunit beta; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; KEGG: bha:BH0053 methionyl-tRNA synthetase YP_003011016.1 PFAM: periplasmic solute binding protein; KEGG: bsu:BSU02850 hypothetical protein YP_003011017.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA4505 cation ABC transporter ATP-binding protein YP_003011018.1 PFAM: ABC transporter; inner-membrane translocator; KEGG: bha:BH1395 ABC transporter (permease) YP_003011019.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: bar:GBAA3727 cytochrome C biogenesis protein CcdA YP_003011020.1 PFAM: iron dependent repressor; SMART: iron dependent repressor; KEGG: bha:BH2807 manganese transport transcriptional regulator YP_003011021.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: ccs:CCNA_02166 uracil DNA glycosylase superfamily protein YP_003011024.1 PFAM: patatin; KEGG: bar:GBAA1992 phospholipase YP_003011026.1 PFAM: protein of unknown function DUF1385; KEGG: bar:GBAA4425 hypothetical protein YP_003011027.1 KEGG: bsu:BSU24480 hypothetical protein YP_003011028.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_003011029.1 PFAM: peptidase M24; creatinase; KEGG: bar:GBAA4422 proline dipeptidase YP_003011030.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; KEGG: bha:BH2799 elongation factor P YP_003011031.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; KEGG: bsu:BSU28470 aspartate kinase YP_003011032.1 PFAM: protein of unknown function DUF441; KEGG: eum:ECUMN_2078 conserved hypothetical protein; inner membrane protein YP_003011033.1 PFAM: 2-phosphosulfolactate phosphatase; KEGG: cbs:COXBURSA331_A1552 2-phosphosulfolactate phosphatase YP_003011034.1 PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: xau:Xaut_4872 phosphosulfolactate synthase YP_003011035.1 KEGG: bsu:BSU24440 hypothetical protein YP_003011036.1 TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; KEGG: bha:BH2797 mutants block sporulation after engulfment YP_003011037.1 TIGRFAM: stage III sporulation protein AB; KEGG: bar:GBAA4416 stage III sporulation protein SpoAB YP_003011038.1 TIGRFAM: stage III sporulation protein AC; PFAM: stage III sporulation AC family protein; KEGG: bha:BH2795 mutants block sporulation after engulfment YP_003011039.1 TIGRFAM: stage III sporulation protein AD; KEGG: bsu:BSU24400 mutants block sporulation after engulfment (stage III sporulation) YP_003011040.1 TIGRFAM: stage III sporulation protein AE; KEGG: bha:BH2793 mutants block sporulation after engulfment YP_003011041.1 TIGRFAM: stage III sporulation protein AF; KEGG: bha:BH2792 mutants block sporulation after engulfment YP_003011042.1 TIGRFAM: stage III sporulation protein AG; KEGG: bha:BH2791 mutants block sporulation after engulfment YP_003011043.1 KEGG: bsu:BSU24360 mutants block sporulation after engulfment (stage III sporulation) YP_003011044.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bha:BH2788 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_003011045.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; phosphoribosylglycinamide synthetase; carbamoyl-phosphate synthetase large chain domain protein; KEGG: bar:GBAA4408 acetyl-CoA carboxylase biotin carboxylase subunit YP_003011046.1 PFAM: protein of unknown function DUF322; KEGG: bha:BH2786 hypothetical protein YP_003011049.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mxa:MXAN_4761 transcription antitermination factor NusB YP_003011050.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: bar:GBAA4405 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase YP_003011051.1 KEGG: bar:GBAA4404 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_003011052.1 TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit; KEGG: bha:BH2782 exodeoxyribonuclease VII (small subunit) YP_003011053.1 PFAM: polyprenyl synthetase; KEGG: pca:Pcar_1668 geranyltranstransferase (farnesyldiphosphate synthase) YP_003011054.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase; transketolase; KEGG: bha:BH2779 1-deoxy-D-xylulose-5-phosphate synthase YP_003011055.1 KEGG: bar:GBAA4399 hemolysin A; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein YP_003011056.1 KEGG: scl:sce7160 hypothetical protein YP_003011057.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes YP_003011058.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bha:BH2776 DNA repair and genetic recombination YP_003011059.1 KEGG: bsu:BSU24230 serine peptidase of the SA clan; TIGRFAM: stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; SMART: PDZ/DHR/GLGF domain protein YP_003011060.1 KEGG: bsu:BSU24220 two-component response regulator; TIGRFAM: sporulation transcription factor Spo0A; PFAM: sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver YP_003011061.1 KEGG: bsu:BSU24110 hypothetical protein YP_003011062.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: bar:GBAA4385 dihydrolipoamide dehydrogenase YP_003011063.1 PFAM: dehydrogenase E1 component; KEGG: bar:GBAA4384 3-methyl-2-oxobutanoate dehydrogenase, subunit alpha YP_003011064.1 PFAM: transketolase; transketolase domain protein; KEGG: bar:GBAA4383 3-methyl-2-oxobutanoate dehydrogenase, beta subunit YP_003011065.1 KEGG: sus:acid_0913 lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_003011066.1 TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M42 family protein; KEGG: bar:GBAA4368 peptidase T YP_003011068.1 PFAM: NUDIX hydrolase; KEGG: bha:BH1524 hypothetical protein YP_003011069.1 TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: bsu:BSU23530 required for dissolution of the septal cell wall (stage II sporulation) YP_003011070.1 PFAM: ferric-uptake regulator; KEGG: bha:BH1527 ferric uptake regulation protein YP_003011071.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bsu:BSU38400 extracellular serine protease YP_003011072.1 TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bha:BH2329 alanine dehydrogenase (stage V sporulation protein N) YP_003011074.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: bar:GBAA4311 site-specific tyrosine recombinase XerD YP_003011075.1 KEGG: bar:GBAA4309 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: phosphopentomutase domain protein; metalloenzyme domain protein YP_003011076.1 TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; KEGG: bha:BH1531 purine nucleoside phosphorylase YP_003011078.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; glycosyl transferase, family 3-like; KEGG: bha:BH1533 pyrimidine-nucleoside phosphorylase YP_003011079.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: bsu:BSU23480 penicillin binding protein ( D-alanyl-D-alanine carboxypeptidase) YP_003011080.1 TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: bha:BH1536 anti-sigma F factor antagonist (stage II sporulation protein AA) YP_003011081.1 KEGG: bha:BH1537 anti-sigma F factor; TIGRFAM: anti-sigma F factor; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003011082.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore. YP_003011083.1 KEGG: rsq:Rsph17025_3495 IstB ATP binding domain-containing protein YP_003011084.1 In Listeria monocytogenes this protein binds a specific sites on DNA, influencing the topology and transcription; regulates flaA, proU and ompC; is osmoregulated YP_003011085.1 KEGG: bar:GBAA4291 stage V sporulation protein AA YP_003011086.1 KEGG: bar:GBAA4290 stage V sporulation protein AB YP_003011087.1 PFAM: GerA spore germination protein; KEGG: bha:BH1543 stage V sporulation protein AF YP_003011088.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bar:GBAA1438 diaminopimelate decarboxylase YP_003011089.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bha:BH1545 peptidyl-prolyl cis-trans isomerase B YP_003011090.1 KEGG: bha:BH1554 riboflavin specific deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_003011091.1 KEGG: bar:GBAA4332 riboflavin synthase subunit alpha; TIGRFAM: riboflavin synthase, subunit alpha; PFAM: Lumazine-binding protein YP_003011092.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: bha:BH1556 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_003011093.1 KEGG: bar:GBAA4334 riboflavin synthase subunit beta; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003011094.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bar:GBAA4278 segregation and condensation protein A YP_003011095.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: bha:BH1561 hypothetical protein YP_003011096.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH3481 ABC transporter ATP-binding protein YP_003011097.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pmy:Pmen_4504 binding-protein-dependent transport systems inner membrane component YP_003011098.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ppf:Pput_0129 NlpA lipoprotein YP_003011099.1 KEGG: bha:BH3196 hypothetical protein YP_003011100.1 TIGRFAM: sporulation protein YtfJ; KEGG: bha:BH3195 hypothetical protein YP_003011101.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bha:BH1573 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein) YP_003011102.1 PFAM: nucleoside recognition domain protein; KEGG: bha:BH1574 spore maturation protein YP_003011103.1 PFAM: nucleoside recognition domain protein; KEGG: bha:BH1575 spore maturation protein YP_003011104.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bha:BH1576 pseudouridylate synthase YP_003011105.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bha:BH1577 thiol-disulfide oxidoreductase YP_003011106.1 PFAM: ResB family protein; KEGG: bsu:BSU23140 required for cytochrome C synthesis YP_003011107.1 TIGRFAM: cytochrome C biogenesis protein CcsB; PFAM: cytochrome C assembly protein; KEGG: bha:BH1579 cytochrome C biogenesis YP_003011108.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH1580 two-component response regulator YP_003011109.1 KEGG: sensory histidine protein kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003011110.1 PFAM: Arsenical pump membrane protein; citrate transporter; KEGG: bsu:BSU36030 hypothetical protein YP_003011111.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_003011112.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: har:HEAR2709 thiosulfate sulfurtransferase YP_003011114.1 PFAM: hypothetical protein; KEGG: bha:BH1608 hypothetical protein YP_003011116.1 PFAM: polysaccharide deacetylase; KEGG: xau:Xaut_3452 chitin deacetylase YP_003011118.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence YP_003011119.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: bha:BH1622 glutamate dehydrogenase YP_003011120.1 KEGG: bsu:BSU22940 hypothetical protein YP_003011121.1 KEGG: bha:BH1626 hypothetical protein YP_003011122.1 TIGRFAM: germination protein YpeB; PFAM: propeptide PepSY amd peptidase M4; KEGG: bar:GBAA2747 hypothetical protein YP_003011123.1 PFAM: type IV pilus assembly PilZ; KEGG: bha:BH1633 hypothetical protein YP_003011125.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: bsu:BSU22890 cytidylate kinase YP_003011126.1 KEGG: bha:BH1635 hypothetical protein; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003011127.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: bha:BH1636 30S ribosomal protein S1 YP_003011129.1 KEGG: bsu:BSU22850 involved in spore envelope assembly YP_003011130.1 KEGG: baa:BA_2044 hypothetical protein YP_003011131.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_003011132.1 PFAM: protein of unknown function DUF205; KEGG: bha:BH1639 hypothetical protein YP_003011133.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; ketopantoate reductase; KEGG: bar:GBAA1526 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_003011136.1 PFAM: ferredoxin; KEGG: bbr:BB4649 ferredoxin YP_003011138.1 KEGG: mmw:Mmwyl1_1716 Na(+)-translocating NADH-quinone reductase subunit F YP_003011139.1 KEGG: bar:GBAA1529 hypothetical protein YP_003011140.1 TIGRFAM: stage IV sporulation protein A; KEGG: bha:BH1645 stage IV sporulation protein A (spore cortex formation and coat assembly) YP_003011141.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ent:Ent638_1137 hypothetical protein YP_003011142.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ypi:YpsIP31758_2423 ribose ABC transporter ATP-binding protein YP_003011143.1 PFAM: inner-membrane translocator; KEGG: yen:YE2763 ribose transporter, permease YP_003011144.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: baa:BA_2051 bacterial DNA-binding protein YP_003011145.1 tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination YP_003011147.1 KEGG: bsu:BSU22760 heptaprenyl diphosphate synthase component I YP_003011148.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: bha:BH1649 ubiquinone/menaquinone biosynthesis methyltransferase YP_003011149.1 TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: bha:BH1650 4-hydroxybenzoate octaprenyltransferase YP_003011150.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: bha:BH1651 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_003011151.1 PFAM: protein of unknown function DUF178; KEGG: bha:BH1652 hypothetical protein YP_003011152.1 PFAM: polyprenyl synthetase; KEGG: bha:BH1653 heptaprenyl diphosphate synthase component II (spore germination protein C3) YP_003011153.1 KEGG: bha:BH1654 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003011154.1 KEGG: bha:BH1655 chemotaxis protein methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_003011156.1 KEGG: ecq:ECED1_4047 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003011157.1 TIGRFAM: chorismate mutase; PFAM: chorismate mutase of the AroH class; KEGG: bha:BH1658 chorismate mutase YP_003011158.1 KEGG: gur:Gura_1731 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: chorismate binding-like; anthranilate synthase component I domain protein YP_003011159.1 KEGG: tgr:Tgr7_2799 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_003011160.1 PFAM: indole-3-glycerol phosphate synthase; KEGG: gsu:GSU2380 indole-3-glycerol-phosphate synthase YP_003011161.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: bha:BH1662 N-(5'-phosphoribosyl)anthranilate isomerase YP_003011162.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_003011163.1 KEGG: bsu:BSU22630 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain YP_003011164.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; aminotransferase class V; KEGG: bha:BH1665 histidinol-phosphate aminotransferase YP_003011165.1 PFAM: prephenate dehydrogenase; amino acid-binding ACT domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bha:BH1666 prephenate dehydrogenase YP_003011166.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: hypothetical protein YP_003011167.1 KEGG: hypothetical protein YP_003011168.1 PFAM: phosphoglycerate mutase; KEGG: bsu:BSU10340 hypothetical protein YP_003011169.1 KEGG: hypothetical protein YP_003011170.1 PFAM: conserved hypothetical protein; KEGG: baa:BA_2061 hypothetical protein YP_003011171.1 KEGG: hypothetical protein YP_003011172.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: baa:BA_2063 rieske [2Fe-2S] domain YP_003011173.1 electron transporter YP_003011174.1 PFAM: cytochrome C class I; KEGG: baa:BA_2065 cytochrome b(C-terminal)/b6/petD YP_003011175.1 PFAM: protein of unknown function DUF1405; KEGG: bha:BH1675 hypothetical protein YP_003011176.1 KEGG: bha:BH1676 hypothetical protein YP_003011177.1 PFAM: protein of unknown function DUF161; KEGG: bha:BH1678 hypothetical protein YP_003011178.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: baa:BA_2072 hypothetical protein YP_003011179.1 PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: cbc:CbuK_1291 tetratricopeptide repeat family protein YP_003011180.1 KEGG: bha:BH1680 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; oxidoreductase; semialdehyde dehydrogenase NAD - binding YP_003011181.1 KEGG: bha:BH1681 methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein YP_003011182.1 PFAM: LmbE family protein; KEGG: baa:BA_2075 DUF158, uncharacterized LmbE-like protein, COG2120 YP_003011183.1 PFAM: glycosyl transferase group 1; KEGG: baa:BA_2076 glycos_transf_1, glycosyl transferases group 1 YP_003011184.1 PFAM: polynucleotide adenylyltransferase region; KEGG: bsu:BSU22450 tRNA CCA-pyrophosphorylase YP_003011185.1 KEGG: baa:BA_2078 biotin/lipoate A/B protein ligase family; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; hypothetical protein YP_003011186.1 KEGG: bha:BH1687 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003011187.1 KEGG: baa:BA_2082 pantoate-beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_003011188.1 KEGG: baa:BA_2083 D decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_003011189.1 SMART: hypothetical protein; KEGG: GG18368 gene product from transcript GG18368-RA YP_003011190.1 KEGG: bha:BH1691 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; TIGRFAM: DnaQ family exonuclease/DinG family helicase; DNA polymerase III subunit epsilon; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicase YP_003011191.1 modulates transcription in response to the NADH/NAD(+) redox state YP_003011192.1 PFAM: amidohydrolase; amidohydrolase; KEGG: bha:BH1692 hypothetical protein YP_003011193.1 KEGG: hypothetical protein YP_003011194.1 KEGG: hypothetical protein YP_003011195.1 KEGG: VAR2; VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding ; K03798 cell division protease FtsH; PFAM: ATPase AAA; peptidase M41; SMART: ATPase AAA YP_003011196.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase; KEGG: reu:Reut_A0255 3-hydroxybutyryl-CoA dehydrogenase YP_003011197.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: bar:GBAA4888 acetate kinase YP_003011198.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: bha:BH1697 initiation of chromosome replication YP_003011199.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003011200.1 PFAM: protein of unknown function DUF1680; KEGG: esa:ESA_03870 hypothetical protein YP_003011201.1 PFAM: protein of unknown function DUF124; KEGG: mxa:MXAN_0412 hypothetical protein YP_003011202.1 KEGG: bar:GBAA2065 hypothetical protein YP_003011203.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bba:Bd0979 hypothetical protein YP_003011204.1 TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; KEGG: bsu:BSU13610 methylthioribulose-1-phosphate dehydratase YP_003011205.1 converts 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate to 1,2-dihydroxy-3-keto-5-methylthiopentene; involved in methionine salvage YP_003011206.1 converts 2,3-diketo-5-methylthiopentyl-1-phosphate into 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate; involved in methionine salvage YP_003011207.1 KEGG: bar:GBAA4359 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein YP_003011208.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_003011209.1 KEGG: bar:GBAA2993 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein YP_003011210.1 PFAM: aminotransferase class I and II; KEGG: hypothetical protein YP_003011211.1 KEGG: bar:GBAA2863 hypothetical protein YP_003011212.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bar:GBAA4253 carbon-nitrogen family hydrolase YP_003011213.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU03170 hypothetical protein YP_003011214.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; KEGG: aca:ACP_3469 3-isopropylmalate dehydratase, large subunit YP_003011215.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_003011216.1 KEGG: bsu:BSU24190 hypothetical protein; PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; SMART: cell wall hydrolase/autolysin YP_003011217.1 KEGG: gsu:GSU2922 hypothetical protein YP_003011218.1 PFAM: S-layer domain protein; KEGG: vvu:VV1_2715 autotransporter adhesin YP_003011219.1 KEGG: bar:GBAA1570 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein YP_003011221.1 PFAM: dynamin; GTP-binding protein HSR1-related; KEGG: baa:BA_2113 MMR_HSR1, GTPase of unknown function YP_003011223.1 PFAM: FG-GAP repeat protein; KEGG: bha:BH1114 hypothetical protein YP_003011224.1 PFAM: transposase IS4 family protein; KEGG: bha:BH1427 transposase (08) YP_003011226.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU14030 hypothetical protein YP_003011227.1 PFAM: regulatory protein TetR; KEGG: bsu:BSU08370 hypothetical protein YP_003011228.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: cak:Caul_0500 alcohol dehydrogenase YP_003011229.1 SMART: helix-turn-helix domain protein; KEGG: gbe:GbCGDNIH1_1784 DNA-binding protein YP_003011230.1 PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: bha:BH1125 ABC transporter ATP-binding protein YP_003011231.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bha:BH1126 ABC transporter ATP-binding protein YP_003011232.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis YP_003011233.1 KEGG: bar:GBAA3657 DNA topoisomerase IV subunit B; TIGRFAM: DNA topoisomerase IV subunit beta; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_003011234.1 KEGG: bha:BH2139 DNA topoisomerase IV subunit A; TIGRFAM: DNA gyrase subunit alpha; DNA topoisomerase IV, subunit alpha; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A YP_003011236.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU37550 hypothetical protein YP_003011237.1 KEGG: hhe:HH0003 hypothetical protein YP_003011238.1 PFAM: pseudouridine synthase; KEGG: dol:Dole_0405 pseudouridine synthase YP_003011239.1 KEGG: smd:Smed_0024 hypothetical protein YP_003011240.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: cak:Caul_0713 phosphoesterase PA-phosphatase related YP_003011241.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bha:BH1288 transcriptional repressor of PBSX genes YP_003011243.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism YP_003011244.1 KEGG: mxa:MXAN_6210 hypothetical protein YP_003011245.1 PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA0787 major facilitator family transporter YP_003011246.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: geo:Geob_1288 MarR family transcriptional regulator YP_003011247.1 TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase; KEGG: bha:BH0895 polysaccharide deacetylase (nodulation protein NodB) YP_003011248.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: bsu:BSU38550 branched-chain amino acid aminotransferase YP_003011249.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA3271 LysR family transcriptional regulator YP_003011250.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bar:GBAA4607 transcription elongation factor GreA YP_003011251.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bha:BH3915 methyl-accepting chemotaxis protein YP_003011252.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bar:GBAA4895 hypothetical protein YP_003011253.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU40740 hypothetical protein YP_003011254.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU18530 hypothetical protein YP_003011255.1 KEGG: tcx:Tcr_1705 heat YP_003011256.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ara:Arad_3849 hypothetical protein YP_003011257.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bba:Bd3632 hypothetical protein YP_003011258.1 PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0587 hypothetical protein YP_003011259.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: eba:p1B263 hypothetical protein YP_003011260.1 PFAM: metallophosphoesterase; KEGG: aba:acid345_1977 metallophosphoesterase YP_003011261.1 KEGG: baa:BA_0056 hypothetical protein YP_003011262.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: abc:ACICU_01259 HAD superfamily hydrolase YP_003011264.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: sus:acid_4901 glycoside hydrolase family protein YP_003011266.1 KEGG: bha:BH3932 hypothetical protein YP_003011267.1 KEGG: ara:Arad_9247 hypothetical protein YP_003011271.1 PFAM: YdjC family protein; KEGG: vfi:VF_1341 hypothetical protein YP_003011272.1 KEGG: hypothetical protein YP_003011273.1 KEGG: sme:SM_b20968 hypothetical protein YP_003011274.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH2727 two-component sensor histidine kinase YP_003011275.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2728 two-component response regulator YP_003011276.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein YP_003011277.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1065 hypothetical protein YP_003011278.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1066 hypothetical protein YP_003011279.1 PFAM: oxidoreductase; homoserine dehydrogenase NAD-binding; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: lch:Lcho_3206 oxidoreductase domain-containing protein YP_003011280.1 PFAM: xylose isomerase; KEGG: sus:acid_2048 xylose isomerase domain-containing protein YP_003011281.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein YP_003011282.1 PFAM: glycoside hydrolase family 52; KEGG: bha:BH2114 beta-xylosidase (1,4-beta-D-xylan xylohydrolase) YP_003011283.1 PFAM: carbohydrate-binding CenC domain protein; KEGG: mxa:MXAN_4837 endoglucanase YP_003011284.1 PFAM: S-layer domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: cja:CJA_2477 endo-1,4-beta-glucanase/xyloglucanase, , gly74A YP_003011285.1 PFAM: PA14 domain protein; SMART: PA14 domain protein; KEGG: cja:CJA_2477 endo-1,4-beta-glucanase/xyloglucanase, , gly74A YP_003011286.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003011287.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003011288.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_0944 extracellular solute-binding protein YP_003011289.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpl:BURPS1106A_A2818 carbohydrate ABC transporter periplasmic binding protein YP_003011290.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3681 sugar ABC transporter (permease) YP_003011291.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3682 sugar ABC transporter (permease) YP_003011292.1 PFAM: ricin B lectin; KEGG: hch:HCH_04441 QXW lectin repeat-containing protein YP_003011293.1 PFAM: aldo/keto reductase; KEGG: afw:Anae109_2886 aldo/keto reductase YP_003011294.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA4721 TetR family transcriptional regulator YP_003011295.1 PFAM: GCN5-related N-acetyltransferase; KEGG: baa:BA_2377 acetyltransferase (GNAT) family YP_003011296.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sus:acid_3990 GDSL family lipase YP_003011297.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003011298.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003011299.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH1909 two-component sensor histidine kinase YP_003011300.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003011301.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003011302.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003011303.1 PFAM: PA14 domain protein; glycosyl hydrolase BNR repeat-containing protein; SMART: PA14 domain protein; KEGG: sfu:Sfum_3494 hypothetical protein YP_003011304.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003011305.1 KEGG: sme:SM_b20968 hypothetical protein YP_003011306.1 PFAM: ADP-ribosylation/crystallin J1; KEGG: mes:Meso_1097 hypothetical protein YP_003011307.1 PFAM: glycoside hydrolase family 38; glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: bha:BH0789 hypothetical protein YP_003011308.1 PFAM: raffinose synthase; KEGG: hypothetical protein YP_003011309.1 KEGG: hypothetical protein YP_003011310.1 PFAM: coagulation factor 5/8 type domain protein; glycosyl hydrolase; KEGG: sde:Sde_3845 hypothetical protein YP_003011311.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: jan:Jann_1468 oxidoreductase-like YP_003011312.1 PFAM: xylose isomerase; KEGG: yps:YPTB3612 hypothetical protein YP_003011313.1 PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll4149 sugar ABC transporter (sugar-binding protein) YP_003011314.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003011315.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003011316.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1865 sugar transporter (permease) (binding protein dependent transporter) YP_003011317.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1866 sugar transporter (permease) (binding protein dependent transporter) YP_003011318.1 KEGG: sde:Sde_0803 HesB/YadR/YfhF YP_003011319.1 KEGG: ecr:ECIAI1_1931 neopullulanase YP_003011320.1 PFAM: protein of unknown function DUF1680; KEGG: sus:acid_6519 hypothetical protein YP_003011321.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cko:CKO_02450 hypothetical protein YP_003011322.1 PFAM: glycosyl hydrolase family 88; KEGG: bha:BH2054 unsaturated glucuronyl hydrolase YP_003011323.1 KEGG: sus:acid_3172 hypothetical protein YP_003011324.1 PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: wsu:WS0692 hypothetical protein YP_003011325.1 PFAM: methyltransferase type 11; KEGG: gbm:Gbem_1026 methyltransferase type 11 YP_003011326.1 PFAM: monooxygenase FAD-binding; tryptophan halogenase; FAD dependent oxidoreductase; KEGG: ade:Adeh_0390 FAD-binding monooxygenase YP_003011328.1 PFAM: beta-ketoacyl synthase; KEGG: pca:Pcar_1440 3-oxoacyl-(acyl-carrier-protein) synthase II YP_003011329.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sdn:Sden_1377 glyoxalase/bleomycin resistance protein/dioxygenase YP_003011330.1 KEGG: bha:BH3796 hypothetical protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; ArgK protein YP_003011332.1 KEGG: bar:GBAA2839 hypothetical protein YP_003011333.1 KEGG: mpo:Mpop_2211 import inner membrane translocase subunit Tim44 YP_003011334.1 PFAM: protein of unknown function DUF309; KEGG: bsu:BSU23230 hypothetical protein YP_003011335.1 PFAM: carbonic anhydrase; KEGG: cvi:CV_0520 carbonate dehydratase YP_003011336.1 KEGG: bar:GBAA5025 hypothetical protein YP_003011337.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: baa:BA_2104 carboxypeptidase Taq (M32) metallopeptidase YP_003011338.1 KEGG: bar:GBAA5036 ABC transporter substrate-binding protein YP_003011339.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA5037 ABC transporter ATP-binding protein YP_003011340.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30620 hypothetical protein YP_003011341.1 PFAM: protein of unknown function DUF939; KEGG: bsu:BSU23950 hypothetical protein YP_003011342.1 KEGG: bha:BH2370 outer spore coat protein YP_003011344.1 KEGG: bsu:BSU13780 hypothetical protein YP_003011345.1 KEGG: bsu:BSU13780 hypothetical protein YP_003011346.1 KEGG: bar:GBAA3905 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair protein MutS; MutS III domain protein YP_003011347.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: bar:GBAA3904 DNA mismatch repair protein YP_003011348.1 PFAM: protein of unknown function DUF548; KEGG: bar:GBAA2174 hypothetical protein YP_003011349.1 KEGG: bar:GBAA3843 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003011350.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: bha:BH2365 RNA-binding protein Hfq YP_003011351.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein; KEGG: bsu:BSU10110 penicillin-binding protein 2C YP_003011352.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: CYN71; peptidyl-prolyl cis-trans isomerase, cyclophilin-type ; K01802 peptidylprolyl isomerase YP_003011353.1 PFAM: protein of unknown function DUF402; KEGG: baa:BA_1973 hypothetical protein YP_003011354.1 PFAM: protein of unknown function DUF218; KEGG: cvi:CV_4109 hypothetical protein YP_003011355.1 PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: bsu:BSU17420 sporulation protein VK YP_003011356.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: bar:GBAA3837 GTP-binding protein YP_003011357.1 PFAM: aluminum resistance protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bsu:BSU17440 hypothetical protein YP_003011358.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bsu:BSU17450 transcriptional regulator YP_003011359.1 KEGG: bha:BH2360 glutamine synthetase (glutamate--ammonia ligase); TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003011360.1 PFAM: PspC domain protein; KEGG: cbc:CbuK_0644 stress-responsive transcriptional regulator YP_003011361.1 KEGG: bha:BH2356 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein YP_003011362.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: bsu:BSU17860 hypothetical protein YP_003011363.1 PFAM: protein of unknown function DUF896; KEGG: bha:BH2353 hypothetical protein YP_003011365.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bha:BH2155 hypothetical protein YP_003011366.1 PFAM: acireductone dioxygenase; KEGG: bar:GBAA4258 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase YP_003011367.1 TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; dihydropteroate synthase DHPS; Vitamin B12 dependent methionine synthase activation region; KEGG: bha:BH1630 5-methyltetrahydrofolate S-homocysteine methyltransferase YP_003011368.1 TIGRFAM: ribonuclease Z; PFAM: beta-lactamase domain protein; KEGG: ent:Ent638_2818 ribonuclease Z YP_003011369.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: bsu:BSU08620 hypothetical protein YP_003011370.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: bsu:BSU22220 hypothetical protein YP_003011371.1 KEGG: bsu:BSU22210 hypothetical protein YP_003011372.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bsu:BSU32290 hypothetical protein YP_003011373.1 PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: bar:GBAA4830 formamidopyrimidine-DNA glycosylase YP_003011374.1 KEGG: hypothetical protein; TIGRFAM: apurinic endonuclease Apn1; PFAM: xylose isomerase; SMART: AP endonuclease family 2 YP_003011375.1 KEGG: bvi:Bcep1808_6326 hypothetical protein YP_003011376.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: hha:Hhal_1661 RNA 2'-O-ribose methyltransferase YP_003011377.1 PFAM: serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: hch:HCH_06862 serine/threonine protein kinase YP_003011378.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bsu:BSU13250 hypothetical protein YP_003011379.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA2213 sensor histidine kinase YP_003011380.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bha:BH1089 hypothetical protein YP_003011381.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH3829 hypothetical protein YP_003011382.1 KEGG: hypothetical protein YP_003011383.1 PFAM: beta-lactamase; KEGG: gsu:GSU2465 metallo-beta-lactamase family protein YP_003011385.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS; MutS III domain protein; KEGG: bha:BH0376 DNA mismatch repair protein YP_003011386.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: sat:SYN_01522 thiamin pyrophosphokinase YP_003011387.1 PFAM: protein of unknown function UPF0126; KEGG: bsu:BSU33460 hypothetical protein YP_003011388.1 PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: baa:BA_0982 low molecular weight phosphotyrosine protein phosphatase YP_003011389.1 PFAM: esterase; KEGG: bha:BH1440 hypothetical protein YP_003011390.1 KEGG: bha:BH2655 pyruvate dehydrogenase E1 (lipoamide) subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component YP_003011391.1 PFAM: transketolase; transketolase domain protein; KEGG: bsu:BSU14590 pyruvate dehydrogenase (E1 subunit beta) YP_003011392.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: bha:BH2653 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_003011393.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bsu:BSU14610 dihydrolipoamide dehydrogenase YP_003011394.1 PFAM: thioesterase superfamily protein; KEGG: bha:BH2302 acyl-CoA thioester hydrolase YP_003011395.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived YP_003011396.1 PFAM: dihydrofolate reductase region; KEGG: aha:AHA_3377 dihydrofolate reductase YP_003011397.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bha:BH1729 glutamate synthase subunit beta YP_003011399.1 KEGG: bha:BH0301 hypothetical protein YP_003011400.1 KEGG: dac:Daci_0884 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003011401.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sus:acid_0773 hydrolase YP_003011404.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bba:Bd3104 phosphonate ABC transporter ATP-binding protein YP_003011405.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRB1535 acetyltransferase YP_003011406.1 KEGG: bha:BH1017 hypothetical protein YP_003011408.1 PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: bar:GBAA2440 hypothetical protein YP_003011409.1 PFAM: aminoglycoside phosphotransferase; KEGG: hypothetical protein YP_003011410.1 PFAM: YdjC family protein; KEGG: baa:BA_0293 hypothetical protein predicted by GeneMark YP_003011411.1 KEGG: xac:XAC3164 hypothetical protein YP_003011412.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; SMART: AAA ATPase; KEGG: bar:GBAA3016 hypothetical protein YP_003011413.1 PFAM: protein of unknown function DUF58; KEGG: bar:GBAA2121 hypothetical protein YP_003011414.1 KEGG: hypothetical protein ; K05285 phosphatidylinositol glycan, class N YP_003011415.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bar:GBAA1515 pyridine nucleotide-disulfide oxidoreductase family protein YP_003011417.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bha:BH1125 ABC transporter ATP-binding protein YP_003011418.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bsu:BSU14330 hypothetical protein YP_003011419.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerS YP_003011420.1 PFAM: cell wall hydrolase SleB; peptidoglycan-binding domain 1 protein; KEGG: bar:GBAA2748 spore cortex-lytic enzyme prepeptide YP_003011421.1 KEGG: bar:GBAA2791 ribose-5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase YP_003011422.1 PFAM: metallophosphoesterase; KEGG: bha:BH1859 hypothetical protein YP_003011423.1 PFAM: S-layer domain protein; KEGG: bar:GBAA3367 cell wall anchor domain-containing protein YP_003011424.1 KEGG: bar:GBAA3366 lipoprotein YP_003011425.1 PFAM: cobalt transporter; KEGG: bar:GBAA3365 ABC transporter permease YP_003011426.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA3364 ABC transporter ATP-binding protein YP_003011427.1 KEGG: bar:GBAA3363 hypothetical protein YP_003011428.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0998 acetyltransferase YP_003011429.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: rsq:Rsph17025_2137 lysine exporter protein LysE/YggA YP_003011430.1 PFAM: YceI family protein; KEGG: ank:AnaeK_0992 YceI family protein YP_003011431.1 SMART: helicase c2; KEGG: bar:GBAA1586 hypothetical protein YP_003011432.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003011433.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bha:BH2712 LysR family transcriptional regulator YP_003011434.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_003011435.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_003011436.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_003011437.1 PFAM: NUDIX hydrolase; KEGG: bha:BH3089 mutator MutT protein YP_003011438.1 TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bha:BH0574 chromate transporter YP_003011439.1 KEGG: dac:Daci_3157 Ypar31 protein YP_003011440.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2807 acetyltransferase YP_003011441.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function DUF227; KEGG: ppf:Pput_3911 hypothetical protein YP_003011444.1 PFAM: stress responsive alpha-beta barrel domain protein; KEGG: hypothetical protein YP_003011446.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bar:GBAA3602 short chain dehydrogenase YP_003011447.1 PFAM: methyltransferase type 11; KEGG: swp:swp_0176 SAM-dependent methyltransferase YP_003011448.1 PFAM: NUDIX hydrolase; KEGG: hypothetical protein YP_003011449.1 KEGG: bha:BH0318 hypothetical protein YP_003011450.1 PFAM: pentapeptide repeat protein; KEGG: bar:GBAA2411 acetyltransferase YP_003011451.1 KEGG: bha:BH3932 hypothetical protein YP_003011452.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003011453.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pfl:PFL_0776 glyoxalase family protein YP_003011455.1 PFAM: KWG Leptospira repeat protein; KEGG: bha:BH1017 hypothetical protein YP_003011457.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicase ; helicase; KEGG: acp:A2cp1_1865 DEAD/H associated domain protein YP_003011458.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bar:GBAA2443 ABC transporter permease/ATP-binding protein YP_003011459.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bha:BH0815 ABC transporter ATP-binding protein YP_003011460.1 PFAM: copper amine oxidase domain protein; KEGG: bsu:BSU05710 hypothetical protein YP_003011462.1 KEGG: bar:GBAA2845 hypothetical protein YP_003011463.1 PFAM: radical SAM protein; KEGG: baa:BA_0565 MoaA_NifB_PqqE, MoaA / NifB / PqqE family YP_003011464.1 PFAM: chloride channel core; KEGG: bam:Bamb_5519 Cl-channel, voltage-gated family protein YP_003011465.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpt:Bpet1701 acetyltransferase YP_003011466.1 PFAM: peptidase M42 family protein; peptidase M20; KEGG: baa:BA_1479 peptidase_M20, peptidase family M20/M25/M40 YP_003011467.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sfu:Sfum_0826 PAS/PAC sensor signal transduction histidine kinase YP_003011468.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: baa:BA_0519 REC, CheY-homologous receiver domain YP_003011469.1 KEGG: bsu:BSU17780 hypothetical protein YP_003011470.1 KEGG: baa:BA_2318 hypothetical protein YP_003011471.1 KEGG: sat:SYN_02801 response regulator; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_003011472.1 KEGG: tdn:Suden_0218 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver YP_003011473.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; KEGG: msl:Msil_1885 multi-sensor signal transduction histidine kinase YP_003011474.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: bha:BH3873 acetolactate synthase large subunit YP_003011475.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bar:GBAA2668 glycerophosphoryl diester phosphodiesterase YP_003011477.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bar:GBAA5668 major facilitator family transporter YP_003011478.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU03700 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003011479.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU03710 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003011481.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU03720 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003011482.1 KEGG: nse:NSE_0001 ParB family chromosome partitioning protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003011483.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: sus:acid_7076 NAD-dependent epimerase/dehydratase YP_003011484.1 PFAM: xylose isomerase; KEGG: rlt:Rleg2_5791 xylose isomerase domain protein TIM barrel YP_003011485.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA2877 EmrB/QacA family drug resistance transporter YP_003011486.1 PFAM: transcriptional regulator PadR family protein; KEGG: bar:GBAA4217 hypothetical protein YP_003011487.1 PFAM: SH3 type 3 domain protein; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: baa:BA_2322 SLH, S-layer homology domain YP_003011488.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: hypothetical protein YP_003011490.1 PFAM: van Willebrand factor A; KEGG: bsu:BSU18720 hypothetical protein YP_003011491.1 PFAM: hypothetical protein; KEGG: bar:GBAA4583 TolB domain-containing protein YP_003011493.1 PFAM: protein of unknown function DUF718; KEGG: bha:BH0806 hypothetical protein YP_003011494.1 KEGG: bha:BH1769 hypothetical protein YP_003011495.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase; KEGG: baa:BA_0561 DEAD/DEAH box helicase YP_003011496.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bra:BRADO3397 ABC transporter ATP-binding protein YP_003011497.1 PFAM: beta-lactamase; KEGG: nar:Saro_0870 beta-lactamase YP_003011498.1 PFAM: beta-lactamase; KEGG: sus:acid_3631 hypothetical protein YP_003011499.1 PFAM: protein of unknown function DUF990; KEGG: baa:BA_1104 hypothetical protein predicted by GeneMark YP_003011500.1 PFAM: protein of unknown function DUF990; KEGG: ade:Adeh_0400 hypothetical protein YP_003011501.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mxa:MXAN_6003 ABC transporter ATP-binding protein YP_003011503.1 PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bha:BH0408 transcriptional activator of multidrug-efflux transporter genes YP_003011504.1 PFAM: acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 domain; KEGG: baa:BA_0442 acyl-CoA dehydrogenase, C-terminal domain YP_003011505.1 KEGG: bsu:BSU24170 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase YP_003011506.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase; KEGG: bha:BH3800 3-hydroxybutyryl-CoA dehydrogenase YP_003011507.1 PFAM: acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 domain; KEGG: baa:BA_0443 acyl-CoA dehydrogenase, C-terminal domain YP_003011508.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate YP_003011509.1 KEGG: gur:Gura_0072 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: citrate synthase YP_003011510.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C YP_003011511.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU07420 hypothetical protein YP_003011512.1 PFAM: MOSC domain containing protein; KEGG: maq:Maqu_1139 MOSC domain-containing protein YP_003011513.1 TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bar:GBAA3859 heavy metal-transporting ATPase YP_003011514.1 PFAM: protein of unknown function DUF28; KEGG: bsu:BSU06840 hypothetical protein YP_003011515.1 PFAM: aldo/keto reductase; KEGG: mxa:MXAN_6482 aldo/keto reductase family oxidoreductase YP_003011516.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: rfr:Rfer_0435 NAD-dependent epimerase/dehydratase YP_003011517.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pol:Bpro_0672 protein of unknown function DUF6, transmembrane YP_003011518.1 KEGG: scl:sce6226 hypothetical protein YP_003011519.1 PFAM: VanZ family protein; KEGG: baa:BA_0084 hypothetical protein YP_003011520.1 PFAM: regulatory protein TetR; KEGG: bha:BH3415 NADH dehydrogenase YP_003011521.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU09010 hypothetical protein YP_003011522.1 PFAM: chorismate mutase; KEGG: har:HEAR2642 chorismate mutase (partial) YP_003011524.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH1936 spore germination protein KB YP_003011525.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU03700 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003011526.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH1935 spore germination protein KC YP_003011527.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bsu:BSU10870 hypothetical protein YP_003011528.1 PFAM: aminotransferase class I and II; GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bsu:BSU10880 hypothetical protein YP_003011529.1 PFAM: acyltransferase; KEGG: bsu:BSU27140 hypothetical protein YP_003011530.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bsu:BSU27120 RNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma-V) YP_003011531.1 KEGG: bsu:BSU27130 hypothetical protein YP_003011532.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_1016 short-chain dehydrogenase/reductase SDR YP_003011533.1 KEGG: nwi:Nwi_1610 hypothetical protein YP_003011534.1 KEGG: nwi:Nwi_1610 hypothetical protein YP_003011535.1 TIGRFAM: phosphonate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA3747 phosphonate ABC transporter permease YP_003011536.1 TIGRFAM: phosphonate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hypothetical protein YP_003011537.1 KEGG: bar:GBAA3749 phosphonate ABC transporter ATP-binding; TIGRFAM: phosphonate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003011538.1 TIGRFAM: phosphonate ABC transporter periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bar:GBAA3750 phosphonate ABC transporter phosphonate-binding protein YP_003011539.1 PFAM: 5'-nucleotidase; metallophosphoesterase; KEGG: sus:acid_1294 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_003011540.1 PFAM: amino acid permease-associated region; KEGG: pfl:PFL_4897 amino acid permease family protein YP_003011541.1 TIGRFAM: urea carboxylase-associated protein 2; KEGG: dar:Daro_0072 hypothetical protein YP_003011542.1 TIGRFAM: urea carboxylase-associated protein 1; KEGG: bcm:Bcenmc03_6431 hypothetical protein YP_003011543.1 KEGG: nmu:Nmul_A0943 allophanate hydrolase subunit 2; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; RimK domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; SMART: allophanate hydrolase subunit 2; allophanate hydrolase subunit 1 YP_003011544.1 TIGRFAM: allophanate hydrolase; PFAM: amidase; KEGG: bcm:Bcenmc03_6429 allophanate hydrolase YP_003011545.1 KEGG: bha:BH3686 hypothetical protein YP_003011547.1 KEGG: mucin-associated surface protein (MASP) YP_003011548.1 PFAM: MOSC domain containing protein; KEGG: tgr:Tgr7_2591 hypothetical protein YP_003011549.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bsu:BSU33420 hypothetical protein YP_003011550.1 PFAM: NADPH-dependent FMN reductase; KEGG: dar:Daro_2073 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase YP_003011551.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU11890 hypothetical protein YP_003011552.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: bar:GBAA0205 molybdopterin biosynthesis protein YP_003011553.1 TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU33380 hypothetical protein YP_003011555.1 PFAM: GerA spore germination protein; KEGG: bha:BH1597 spore germination protein YP_003011556.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH2187 hypothetical protein YP_003011557.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH1454 spore germination protein YP_003011558.1 KEGG: bsu:BSU39590 hypothetical protein YP_003011559.1 PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH3309 multidrug resistance protein YP_003011560.1 KEGG: bar:GBAA0807 hypothetical protein YP_003011562.1 SMART: ATPase AAA; KEGG: bha:BH0315 hypothetical protein YP_003011563.1 PFAM: protein of unknown function UPF0157; KEGG: mmr:Mmar10_1757 hypothetical protein YP_003011565.1 PFAM: regulatory protein LysR; regulatory protein MarR; KEGG: cps:CPS_2055 LysR family transcriptional regulator YP_003011566.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_003011567.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bar:GBAA2732 RNA polymerase sigma factor SigX YP_003011569.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: acp:A2cp1_0670 ABC transporter YP_003011570.1 KEGG: met:M446_2858 copper ABC transporter permease protein NosY YP_003011571.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: baa:BA_1216 hypothetical protein YP_003011572.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: baa:BA_1217 hypothetical protein YP_003011573.1 PFAM: GerA spore germination protein; KEGG: baa:BA_1218 hypothetical protein YP_003011574.1 KEGG: hch:HCH_06907 beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_003011575.1 PFAM: protein of unknown function DUF420; KEGG: bar:GBAA3850 hypothetical protein YP_003011577.1 PFAM: glycoside hydrolase family 43; carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: hypothetical protein YP_003011578.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bsu:BSU01890 hypothetical protein YP_003011579.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pha:PSHAb0181 arsenic resistance operon regulator YP_003011582.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bha:BH2923 transcriptional regulator involved in carbon catabolite control YP_003011583.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003011584.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1065 hypothetical protein YP_003011585.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cak:Caul_4076 phosphotransferase domain-containing protein YP_003011589.1 KEGG: bar:GBAA3489 hypothetical protein YP_003011590.1 KEGG: bar:GBAA3489 hypothetical protein YP_003011591.1 PFAM: hypothetical protein; regulatory protein DeoR; KEGG: bar:GBAA3490 DeoR family transcriptional regulator YP_003011592.1 GG10533 gene product from transcript GG10533-RA; KEGG: GG10533 gene product from transcript GG10533-RA YP_003011594.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: xac:XAC4056 transcriptional regulator YP_003011595.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein YP_003011596.1 PFAM: regulatory protein TetR; KEGG: bha:BH0987 TetR/AcrR family transcriptional regulator YP_003011597.1 PFAM: phosphoglycerate mutase; KEGG: bar:GBAA3876 phosphoglycerate mutase family protein YP_003011598.1 PFAM: aldo/keto reductase; KEGG: scl:sce7528 oxidoreductase YP_003011599.1 PFAM: S-layer domain protein; KEGG: vei:Veis_1974 hypothetical protein YP_003011600.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: acb:A1S_1055 hypothetical protein YP_003011601.1 PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; protein of unknown function DUF1058; SMART: cell wall hydrolase/autolysin; SH3 domain protein; KEGG: bsu:BSU27580 hypothetical protein YP_003011602.1 PFAM: methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; methyltransferase type 12; KEGG: bar:GBAA3641 hypothetical protein YP_003011603.1 KEGG: similar to squid CG16901-PC, isoform C YP_003011605.1 KEGG: pca:Pcar_0934 hypothetical protein YP_003011606.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rlt:Rleg2_6483 glyoxalase/bleomycin resistance protein/dioxygenase YP_003011609.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU27430 glutamine ABC transporter ATP-binding protein YP_003011610.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: baa:BA_1224 bacterial periplasmic substrate-binding proteins YP_003011611.1 TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA0641 amino acid ABC transporter permease YP_003011612.1 TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: baa:BA_1226 binding-protein-dependent transporters inner membrane component YP_003011613.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: baa:BA_2307 HATPase_c, histidine kinase-, DNA gyrase B-, phytochrome-like ATPase YP_003011614.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: baa:BA_2308 response_reg, response regulator receiver domain YP_003011615.1 KEGG: bte:BTH_I3267 hypothetical protein YP_003011616.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1926 sugar transporter (permease) YP_003011617.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1925 sugar transporter (permease) YP_003011620.1 KEGG: bar:GBAA0362 hypothetical protein YP_003011623.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: har:HEAR1714 hypothetical protein YP_003011624.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU05610 ATP-binding transporter YP_003011627.1 PFAM: beta-lactamase; KEGG: xop:PXO_04833 beta-lactamase YP_003011629.1 KEGG: similar to protein phosphatase 2, regulatory subunit A, alpha ; K03456 protein phosphatase 2 (formerly 2A), regulatory subunit A YP_003011630.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: bar:GBAA2858 hypothetical protein YP_003011631.1 PFAM: major facilitator superfamily MFS_1; KEGG: csa:Csal_0322 major facilitator superfamily MFS_1 YP_003011632.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA5454 LysR family transcriptional regulator YP_003011633.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hypothetical protein YP_003011634.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_5611 ABC transporter membrane spanning protein (sugar) YP_003011635.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: avi:Avi_8306 ABC transporter nucleotide binding/ATPase protein YP_003011636.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003011637.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_7451 ABC transporter membrane spanning protein YP_003011639.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cak:Caul_4076 phosphotransferase domain-containing protein YP_003011640.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bar:GBAA4391 glycerophosphoryl diester phosphodiesterase family protein YP_003011641.1 TIGRFAM: acetolactate synthase large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: bsu:BSU28310 acetolactate synthase catalytic subunit YP_003011642.1 TIGRFAM: acetolactate synthase small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: bha:BH3060 acetolactate synthase 3 regulatory subunit YP_003011644.1 KEGG: baa:BA_2401 hypothetical protein YP_003011645.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU07790 hypothetical protein YP_003011646.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU07780 hypothetical protein YP_003011648.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH1105 spore germination protein YP_003011649.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: reu:Reut_A2607 C4-dicarboxylate transporter/malic acid transporter YP_003011650.1 PFAM: amino acid permease-associated region; KEGG: bar:GBAA3076 lysine-specific permease YP_003011651.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: baa:BA_2135 hypothetical protein predicted by GeneMark YP_003011652.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: baa:BA_2135 hypothetical protein predicted by GeneMark YP_003011653.1 PFAM: major facilitator superfamily MFS_1; KEGG: hypothetical protein YP_003011654.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003011655.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: hypothetical protein YP_003011656.1 PFAM: glucuronate isomerase; KEGG: bsu:BSU12300 glucuronate isomerase YP_003011657.1 catalyzes the formation of D-tagaturonate from D-altronate YP_003011658.1 PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; KEGG: bha:BH0490 altronate hydrolase YP_003011660.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU40480 hypothetical protein YP_003011661.1 PFAM: GntR family transcriptional regulator; GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: maq:Maqu_1365 GntR domain-containing protein YP_003011662.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bar:GBAA2454 RNA polymerase sigma factor SigJ YP_003011663.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: bpl:BURPS1106A_A1601 transposase YP_003011664.1 PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA2628 permease YP_003011665.1 PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bar:GBAA0365 Rieske 2Fe-2S iron-sulfur protein YP_003011666.1 PFAM: regulatory protein TetR; KEGG: dat:HRM2_21660 HTH-type transcriptional regulator YP_003011667.1 PFAM: isochorismatase hydrolase; KEGG: hypothetical protein YP_003011668.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; proton/sugar symporter LacY; KEGG: bar:GBAA1858 major facilitator family transporter YP_003011669.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate YP_003011670.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_1336 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_003011671.1 KEGG: bar:GBAA3755 hypothetical protein YP_003011672.1 PFAM: protein of unknown function DUF1700; KEGG: bar:GBAA3756 hypothetical protein YP_003011673.1 PFAM: transcriptional regulator PadR family protein; KEGG: bar:GBAA3757 hypothetical protein YP_003011674.1 KEGG: cju:C8J_0142 hypothetical protein YP_003011675.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: cjj:CJJ81176_0439 oxidoreductase YP_003011676.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bsu:BSU05990 component of the twin-arginine pre-protein translocation pathway YP_003011677.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bha:BH3905 hypothetical protein YP_003011678.1 PFAM: cytochrome C oxidase subunit II; KEGG: bha:BH2028 hypothetical protein YP_003011679.1 KEGG: bar:GBAA3870 methylated-DNA--protein-cysteine S-methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_003011680.1 PFAM: methyltransferase type 11; NodS family protein; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: rlt:Rleg2_0699 methyltransferase type 11 YP_003011681.1 KEGG: hypothetical protein YP_003011682.1 PFAM: protein of unknown function DUF606; KEGG: kpe:KPK_2583 hypothetical protein YP_003011683.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bar:GBAA3510 cyclic nucleotide-binding domain-containing protein YP_003011684.1 PFAM: protein of unknown function DUF606; KEGG: abb:ABBFA_001661 hypothetical protein YP_003011685.1 PFAM: AzlC family protein; KEGG: baa:BA_2235 hypothetical protein YP_003011686.1 PFAM: branched-chain amino acid transport; KEGG: baa:BA_2236 hypothetical protein YP_003011687.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bar:GBAA1474 penicillin-binding protein YP_003011688.1 PFAM: dienelactone hydrolase; KEGG: baa:BA_2240 DLH, dienelactone hydrolase family YP_003011689.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA2531 ABC transporter ATP-binding protein YP_003011690.1 KEGG: bar:GBAA1040 UvrD/Rep family helicase YP_003011691.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA5454 LysR family transcriptional regulator YP_003011692.1 PFAM: carboxylesterase type B; KEGG: cak:Caul_1847 carboxylesterase type B YP_003011693.1 PFAM: protein of unknown function DUF81; KEGG: bsu:BSU05690 hypothetical protein YP_003011694.1 PFAM: isochorismatase hydrolase; KEGG: bar:GBAA2963 isochorismatase family protein YP_003011695.1 PFAM: acetyl xylan esterase; KEGG: bsu:BSU03180 cephalosporin C deacetylase YP_003011696.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003011697.1 KEGG: bar:GBAA4814 TetR family transcriptional regulator YP_003011698.1 PFAM: pentapeptide repeat protein; KEGG: bpy:Bphyt_2842 pentapeptide repeat protein YP_003011700.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH1936 spore germination protein KB YP_003011701.1 PFAM: GerA spore germination protein; KEGG: bha:BH1934 spore germination protein KA YP_003011702.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH1935 spore germination protein KC YP_003011704.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bha:BH0656 hypothetical protein YP_003011705.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bar:GBAA2768 thioredoxin reductase YP_003011706.1 PFAM: ion transport 2 domain protein ; TrkA-N domain protein; KEGG: bha:BH3340 potassium channel protein YP_003011707.1 PFAM: methyltransferase type 11; methyltransferase type 12; thiopurine S-methyltransferase; KEGG: bar:GBAA2590 hypothetical protein YP_003011708.1 PFAM: FAD dependent oxidoreductase; KEGG: bsu:BSU32630 hypothetical protein YP_003011709.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: bvi:Bcep1808_4933 phytanoyl-CoA dioxygenase YP_003011710.1 PFAM: cupin; AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU08250 hypothetical protein YP_003011711.1 PFAM: glycoside hydrolase family 43; KEGG: shw:Sputw3181_1949 glycoside hydrolase family protein YP_003011712.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH1909 two-component sensor histidine kinase YP_003011713.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003011714.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_003011715.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1912 transmembrane lipoprotein YP_003011716.1 KEGG: bha:BH1913 hypothetical protein YP_003011718.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cko:CKO_04421 hypothetical protein YP_003011719.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein YP_003011720.1 PFAM: catalase domain protein; KEGG: bar:GBAA3030 catalase YP_003011722.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU26870 hypothetical protein YP_003011723.1 TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: geo:Geob_0411 amidohydrolase YP_003011724.1 PFAM: C4-dicarboxylate anaerobic carrier; Na+/H+ antiporter NhaC; AbgT transporter; KEGG: pcr:Pcryo_0766 C4-dicarboxylate anaerobic carrier YP_003011725.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: bur:Bcep18194_A5994 galactonate dehydratase YP_003011726.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: bar:GBAA3392 HAD superfamily hydrolase YP_003011727.1 KEGG: swd:Swoo_3656 hypothetical protein YP_003011728.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: aba:acid345_0579 beta-glucuronidase YP_003011729.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SM_b21419 AraC family transcriptional regulator protein YP_003011730.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: bar:GBAA3725 hypothetical protein YP_003011731.1 TIGRFAM: conserved repeat domain protein; KEGG: swd:Swoo_1509 hypothetical protein YP_003011734.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bar:GBAA3565 ArsR family transcriptional regulator YP_003011735.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: mlo:mll1975 cinnamoyl-CoA reductase YP_003011736.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2699 acetyltransferase YP_003011737.1 PFAM: extracellular solute-binding protein family 5; KEGG: baa:BA_1422 SBP_bac_5, bacterial extracellular solute-binding proteins, family 5 YP_003011738.1 related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase; KEGG: bsu:BSU21390 hypothetical protein YP_003011739.1 KEGG: sus:acid_0266 hypothetical protein YP_003011740.1 PFAM: basic membrane lipoprotein; KEGG: dde:Dde_1507 Bmp family membrane protein YP_003011741.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: aav:Aave_1136 Rieske (2Fe-2S) domain-containing protein YP_003011742.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gsu:GSU2145 DNA-binding response regulator YP_003011743.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: baa:BA_1236 HATPase_c, histidine kinase-, DNA gyrase B-, phytochrome-like ATPase YP_003011744.1 PFAM: protein of unknown function DUF1541; KEGG: bsu:BSU05790 hypothetical protein YP_003011745.1 KEGG: bsu:BSU18520 hypothetical protein YP_003011746.1 PFAM: ROK family protein; KEGG: hypothetical protein YP_003011747.1 PFAM: major facilitator superfamily MFS_1; KEGG: hypothetical protein YP_003011748.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003011749.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: hypothetical protein YP_003011750.1 PFAM: glycosyl hydrolase family 32 YP_003011751.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bha:BH1861 alpha-L-arabinofuranosidase YP_003011752.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eum:ECUMN_4435 DNA-binding transcriptional activator, L-rhamnose-binding YP_003011753.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: vha:VIBHAR_06039 hypothetical protein YP_003011754.1 PFAM: zinc finger SWIM domain protein; KEGG: ecm:EcSMS35_3510 SWIM zinc finger domain protein YP_003011756.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: pna:Pnap_3739 ATPase YP_003011757.1 KEGG: dac:Daci_4845 hypothetical protein YP_003011758.1 PFAM: VWA containing CoxE family protein; KEGG: dac:Daci_4844 VWA containing CoxE family protein YP_003011759.1 TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: bar:GBAA4643 stage V sporulation protein B YP_003011760.1 PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: bha:BH0479 hypothetical protein YP_003011761.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_4529 aldo/keto reductase YP_003011762.1 KEGG: baa:BA_2472 hypothetical protein YP_003011763.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA3661 DNA-binding response regulator YP_003011764.1 PFAM: histidine kinase A domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bar:GBAA2861 sensor histidine kinase SrrB YP_003011765.1 KEGG: psb:Psyr_2540 oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal YP_003011766.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bha:BH0800 dehydrogenase/reductase family protein YP_003011767.1 KEGG: sus:acid_6903 hypothetical protein YP_003011769.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: bsu:BSU36300 DeoR family transcriptional regulator YP_003011770.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: bar:GBAA4271 HAD superfamily hydrolase YP_003011771.1 PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA3279 hypothetical protein YP_003011772.1 KEGG: mlo:mlr3114 hypothetical protein YP_003011773.1 KEGG: bha:BH3118 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003011774.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bha:BH3117 RNA polymerase ECF-type sigma factor YP_003011775.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU07790 hypothetical protein YP_003011776.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU07780 hypothetical protein YP_003011777.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH1936 spore germination protein KB YP_003011778.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bsu:BSU35990 hypothetical protein YP_003011779.1 PFAM: helix-turn-helix HxlR type; KEGG: dde:Dde_1352 transcriptional regulator YP_003011781.1 PFAM: Forkhead-associated protein; transcriptional regulator domain protein; SMART: Forkhead-associated protein; KEGG: bha:BH1777 hypothetical protein YP_003011782.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: bha:BH3784 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003011783.1 KEGG: bar:GBAA2112 hypothetical protein YP_003011784.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU03710 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003011785.1 PFAM: Spore germination protein; KEGG: bsu:BSU35810 component of a germinant receptor YP_003011786.1 PFAM: GerA spore germination protein; KEGG: baa:BA_1297 hypothetical protein YP_003011787.1 PFAM: regulatory protein TetR; KEGG: ppd:Ppro_0332 TetR family transcriptional regulator YP_003011788.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH03007 short-chain dehydrogenase protein YP_003011789.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: nwi:Nwi_2139 antibiotic biosynthesis monooxygenase YP_003011790.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA2877 EmrB/QacA family drug resistance transporter YP_003011792.1 PFAM: integrase family protein; KEGG: gsu:GSU0492 phage integrase family site specific recombinase YP_003011793.1 PFAM: isochorismatase hydrolase; KEGG: pla:Plav_0992 isochorismatase hydrolase YP_003011794.1 KEGG: aca:ACP_1356 BNR/Asp-box repeat protein YP_003011796.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU02860 hypothetical protein YP_003011797.1 PFAM: ABC transporter; transporter permease protein; KEGG: bsu:BSU02870 hypothetical protein YP_003011798.1 PFAM: periplasmic solute binding protein; KEGG: bsu:BSU02850 hypothetical protein YP_003011799.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bsu:BSU03360 hypothetical protein YP_003011801.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_1731 hypothetical protein YP_003011802.1 KEGG: sus:acid_0961 hypothetical protein YP_003011803.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS03889 transcription regulator protein YP_003011804.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bar:GBAA3440 short chain dehydrogenase/reductase family oxidoreductase YP_003011806.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU03700 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003011807.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH1935 spore germination protein KC YP_003011809.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU03720 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003011810.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU33320 ferrichrome ABC transporter (ferrichrome-binding protein) YP_003011811.1 PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003011814.1 KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003011815.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: rle:pRL90127 glycosyl hydrolase YP_003011816.1 KEGG: bar:GBAA2398 lipoprotein YP_003011817.1 KEGG: hypothetical protein YP_003011818.1 KEGG: scl:sce6530 hypothetical protein YP_003011819.1 KEGG: hypothetical protein YP_003011820.1 PFAM: GCN5-related N-acetyltransferase; KEGG: amc:MADE_01186 CN5-related N-acetyltransferase YP_003011821.1 PFAM: aminoglycoside phosphotransferase; KEGG: jan:Jann_1376 aminoglycoside phosphotransferase YP_003011822.1 PFAM: amidase; KEGG: bar:GBAA2072 amidase YP_003011823.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU36480 hypothetical protein YP_003011824.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA5454 LysR family transcriptional regulator YP_003011825.1 PFAM: DinB family protein; KEGG: bar:GBAA2558 hypothetical protein YP_003011826.1 PFAM: ribonuclease H; KEGG: baa:BA_2140 RNase H YP_003011827.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pae:PA3571 transcriptional regulator MmsR YP_003011828.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: sus:acid_2094 alpha-N-arabinofuranosidase YP_003011829.1 PFAM: aminoglycoside phosphotransferase; KEGG: bsu:BSU29920 hypothetical protein YP_003011830.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA3661 DNA-binding response regulator YP_003011831.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA5067 sensory box histidine kinase YP_003011833.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH2086 ArsR family transcriptional regulator YP_003011834.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bbt:BBta_3488 hypothetical protein YP_003011835.1 PFAM: ABC transporter; KEGG: mxa:MXAN_2795 nogalamycin resistance protein SnorO YP_003011836.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA2439 LysR family transcriptional regulator YP_003011837.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH1936 spore germination protein KB YP_003011838.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH1935 spore germination protein KC YP_003011839.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU03700 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003011840.1 PFAM: Domain of unknown function DUF1801; KEGG: bsu:BSU05750 hypothetical protein YP_003011841.1 PFAM: DinB family protein; KEGG: bar:GBAA2558 hypothetical protein YP_003011842.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mxa:MXAN_1520 short chain dehydrogenase/reductase family oxidoreductase YP_003011843.1 PFAM: regulatory protein TetR; KEGG: bsu:BSU06860 hypothetical protein YP_003011844.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: csa:Csal_3232 major facilitator superfamily MFS_1 YP_003011845.1 PFAM: aminoglycoside phosphotransferase; KEGG: hypothetical protein YP_003011846.1 PFAM: carbohydrate binding family 6; KEGG: sus:acid_0535 hypothetical protein YP_003011847.1 KEGG: bsu:BSU04390 hypothetical protein YP_003011848.1 PFAM: NIPSNAP family containing protein; KEGG: sus:acid_3876 NIPSNAP family protein YP_003011849.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bsu:BSU05300 hypothetical protein YP_003011850.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_2090 short-chain dehydrogenase/reductase SDR YP_003011851.1 PFAM: NIPSNAP family containing protein; KEGG: vei:Veis_2970 NIPSNAP family protein YP_003011852.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bha:BH1205 hypothetical protein YP_003011853.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU26670 LysR family transcriptional regulator YP_003011854.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF1228; KEGG: bmc:BAbS19_I03710 tetracycline resistance protein YP_003011855.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU07790 hypothetical protein YP_003011857.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU17760 hypothetical protein YP_003011858.1 PFAM: protein of unknown function DUF1006; KEGG: aha:AHA_3215 hypothetical protein YP_003011859.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: glo:Glov_0588 transcriptional regulator YP_003011860.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sus:acid_6283 integral membrane sensor signal transduction histidine kinase YP_003011862.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2845 extracellular solute-binding protein YP_003011863.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mca:MCA1942 sugar ABC transporter permease YP_003011864.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_1221 probable sugar transport inner membrane protein YP_003011865.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: cff:CFF8240_0758 macrolide-specific efflux protein MacA YP_003011866.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bar:GBAA0591 glycerophosphoryl diester phosphodiesterase family protein YP_003011867.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_003011869.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU17750 hypothetical protein YP_003011870.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU17760 hypothetical protein YP_003011871.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU03710 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003011873.1 KEGG: baa:BA_2450 hypothetical protein YP_003011874.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA4814 TetR family transcriptional regulator YP_003011875.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rle:RL2941 short-chain dehydrogenase/oxidoreductase YP_003011876.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bba:Bd3057 MarR family transcription regulator YP_003011877.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bcj:BCAM2754 ketoreductase YP_003011878.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: bph:Bphy_6640 alkylhydroperoxidase YP_003011879.1 PFAM: NmrA family protein; dihydrodipicolinate reductase; dTDP-4-dehydrorhamnose reductase; KEGG: scl:sce5373 hypothetical protein YP_003011880.1 KEGG: bha:BH1448 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A YP_003011881.1 TIGRFAM: molybdate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU33390 hypothetical protein YP_003011882.1 KEGG: mxa:MXAN_3423 hypothetical protein YP_003011883.1 PFAM: erythromycin esterase; KEGG: scl:sce5437 erythromycin esterase YP_003011885.1 KEGG: bar:GBAA4429 spore photoproduct lyase YP_003011886.1 PFAM: glycoside hydrolase; KEGG: bha:BH0675 beta-hexosamidase A precursor YP_003011887.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU30150 hypothetical protein YP_003011888.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003011889.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atu:Atu3022 ABC transporter membrane spanning protein (sugar) YP_003011890.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003011891.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003011892.1 PFAM: NHL repeat containing protein; KEGG: pna:Pnap_4087 hypothetical protein YP_003011893.1 PFAM: pentapeptide repeat protein; KEGG: gur:Gura_0761 pentapeptide repeat-containing protein YP_003011894.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU17760 hypothetical protein YP_003011895.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU17770 hypothetical protein YP_003011896.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU07790 hypothetical protein YP_003011897.1 PFAM: protein of unknown function DUF990; KEGG: scl:sce6748 hypothetical protein YP_003011898.1 KEGG: scl:sce6749 ABC transporter permease protein YP_003011899.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce6750 ABC transporter ATP-binding protein YP_003011902.1 PFAM: glycosyl transferase family 2; KEGG: bcj:BCAL3128 glycosyltransferase YP_003011903.1 PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A2152 glycosyl transferase, group 1 YP_003011904.1 KEGG: baa:BA_1468 hypothetical protein YP_003011905.1 KEGG: bsu:BSU13530 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein YP_003011906.1 PFAM: CutC family protein; KEGG: bpy:Bphyt_0416 CutC family protein YP_003011907.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: bsu:BSU18830 phosphoenolpyruvate synthase YP_003011908.1 KEGG: hypothetical protein YP_003011911.1 PFAM: ferritin; KEGG: bha:BH1018 stress- and starvation-induced gene controlled by sigma-B YP_003011912.1 PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; KEGG: ppg:PputGB1_2943 DEAD_2 domain-containing protein YP_003011913.1 PFAM: GntR family transcriptional regulator; GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: baa:BA_2270 HTH_GNTR, helix_turn_helix gluconate operon transcriptional repressor YP_003011914.1 KEGG: mca:MCA2082 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003011915.1 KEGG: bsu:BSU04380 hypothetical protein YP_003011916.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH0372 two-component response regulator YP_003011917.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bar:GBAA3260 sensor histidine kinase YP_003011920.1 PFAM: protein of unknown function DUF421; KEGG: baa:BA_2344 hypothetical protein YP_003011921.1 KEGG: bha:BH2573 penicillin-binding protein 2B (cell-division septum); PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein YP_003011922.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: scl:sce5302 3-oxoacyl-[acyl-carrier-protein] reductase YP_003011923.1 PFAM: polysaccharide lyase 8 alpha-helical; polysaccharide lyase family 8; polysaccharide lyase family 8 domain protein; S-layer domain protein; KEGG: vfi:VF_A0994 hyaluronate lyase precursor YP_003011924.1 PFAM: GntR family transcriptional regulator; aminotransferase class I and II; SMART: GntR family transcriptional regulator; KEGG: bsu:BSU05180 hypothetical protein YP_003011925.1 PFAM: amine oxidase; KEGG: vsa:VSAL_II0981 flavin containing amine oxidoreductase YP_003011926.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU05190 hypothetical protein YP_003011927.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bar:GBAA2644 sporulation kinase B YP_003011929.1 KEGG: aca:ACP_1583 melibiase family YP_003011930.1 KEGG: sensory histidine protein kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003011931.1 PFAM: metallophosphoesterase; KEGG: dat:HRM2_13400 phosphohydrolase YP_003011932.1 PFAM: protein of unknown function DUF74; KEGG: bra:BRADO6695 hypothetical protein YP_003011934.1 PFAM: Spermine synthase; KEGG: mxa:MXAN_6344 hypothetical protein YP_003011935.1 PFAM: cupin; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rpb:RPB_0180 AraC family transcriptional regulator YP_003011936.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: similar to Y105C5B.9 YP_003011937.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sus:acid_7076 NAD-dependent epimerase/dehydratase YP_003011938.1 PFAM: GntR family transcriptional regulator; GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: rme:Rmet_5099 transcriptional regulator, GntR family YP_003011939.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_6220 short-chain dehydrogenase/reductase SDR YP_003011940.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: atc:AGR_L_1470 racemase YP_003011941.1 PFAM: amidohydrolase 2; KEGG: avi:Avi_6094 hypothetical protein YP_003011942.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB1748 short chain dehydrogenase YP_003011943.1 PFAM: fumarylacetoacetate hydrolase; KEGG: mrd:Mrad2831_1789 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_003011944.1 PFAM: helix-turn-helix HxlR type; KEGG: abu:Abu_0028 hypothetical protein YP_003011945.1 KEGG: hypothetical protein YP_003011946.1 KEGG: hypothetical protein YP_003011947.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: baa:BA_0137 REC, CheY-homologous receiver domain YP_003011948.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA5067 sensory box histidine kinase YP_003011949.1 PFAM: VanZ family protein; KEGG: bha:BH3967 hypothetical protein YP_003011950.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bsu:BSU05300 hypothetical protein YP_003011951.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ara:Arad_4705 amino acid ABC transporter YP_003011952.1 TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_7225 ABC transporter transmembrane protein (amino acid) YP_003011953.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU03590 hypothetical protein YP_003011954.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: reu:Reut_C6136 metal-dependent phosphohydrolase YP_003011955.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mno:Mnod_3295 AraC family transcriptional regulator YP_003011956.1 PFAM: phytanoyl-CoA dioxygenase; PBS lyase HEAT domain protein repeat-containing protein; HEAT domain containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: hypothetical protein YP_003011958.1 PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: mxa:MXAN_2815 glyceraldehyde-3-phosphate dehydrogenase 1 YP_003011959.1 PFAM: lipolytic protein G-D-S-L family; KEGG: baa:BA_0509 Lipase_GDSL, lipase/acylhydrolase with GDSL-like motif YP_003011960.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA5650 ABC transporter ATP-binding protein YP_003011961.1 KEGG: baa:BA_0506 hypothetical protein predicted by GeneMark YP_003011962.1 KEGG: bpd:BURPS668_A1981 hypothetical protein YP_003011965.1 KEGG: bar:GBAA5044 hypothetical protein YP_003011966.1 PFAM: zinc finger SWIM domain protein; KEGG: baa:BA_0334 hypothetical protein YP_003011967.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: baa:BA_0335 SNF2_N, SNF2 and others N-terminal domain YP_003011968.1 KEGG: baa:BA_2107 metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003011969.1 PFAM: regulatory protein TetR; KEGG: rso:RS05498 transcription regulator protein YP_003011970.1 PFAM: periplasmic binding protein; KEGG: jan:Jann_2122 periplasmic binding protein YP_003011971.1 PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003011972.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bsu:BSU03270 hypothetical protein YP_003011973.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: aba:acid345_3430 oxidoreductase YP_003011974.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: bha:BH2165 hypothetical protein YP_003011975.1 KEGG: baa:BA_0545 domain of unknown function DUF25; TIGRFAM: peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase A; methionine sulfoxide reductase B YP_003011976.1 PFAM: dihydrouridine synthase; KEGG: bsu:BSU08030 hypothetical protein YP_003011977.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: eci:UTI89_C0327 pyridine nucleotide-disulfide oxidoreductase YP_003011978.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA3271 LysR family transcriptional regulator YP_003011979.1 PFAM: amidohydrolase; KEGG: bar:GBAA4727 deaminase YP_003011980.1 PFAM: amidohydrolase; KEGG: bar:GBAA4728 deaminase YP_003011981.1 KEGG: bph:Bphy_5638 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003011982.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bsu:BSU29110 two-component response regulator YP_003011983.1 KEGG: sil:SPO2662 aspartate racemase, TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003011984.1 PFAM: transglutaminase; KEGG: amc:MADE_00841 PKD domain protein YP_003011985.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cla:Cla_1311 conserved hypothetical protein, amino acid adenylation domain protein YP_003011986.1 KEGG: rpt:Rpal_5080 hypothetical protein YP_003011987.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: dat:HRM2_03620 AlgI1 YP_003011991.1 PFAM: aminoglycoside 3-N-acetyltransferase; KEGG: bar:GBAA2930 aminoglycoside N3-acetyltransferase YP_003011992.1 KEGG: vfm:VFMJ11_1749 hypothetical protein YP_003011993.1 PFAM: beta-lactamase; KEGG: bar:GBAA2405 hydrolase YP_003011994.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: aav:Aave_4199 LacI family transcription regulator YP_003011995.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU30150 hypothetical protein YP_003011996.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, multiple sugar transporter permease YP_003011997.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003011998.1 PFAM: extracellular solute-binding protein family 1; KEGG: atu:Atu3024 ABC transporter transmembrane protein (sugar) YP_003011999.1 PFAM: sulfatase; KEGG: sus:acid_1241 sulfatase YP_003012000.1 PFAM: sulfatase; KEGG: sus:acid_1241 sulfatase YP_003012001.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: bar:GBAA4570 50S ribosomal protein L33 YP_003012002.1 PFAM: N-acetyltransferase; KEGG: scl:sce5322 N-hydroxyarylamine O-acetyltransferase YP_003012003.1 PFAM: cupin; KEGG: hypothetical protein YP_003012004.1 PFAM: ankyrin; SMART: ankyrin; KEGG: aba:acid345_2372 ankyrin YP_003012005.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bar:GBAA4895 hypothetical protein YP_003012006.1 PFAM: fructose-16-bisphosphatase; KEGG: bsu:BSU40190 fructose-1,6-bisphosphatase YP_003012007.1 PFAM: glycosyltransferase; carbohydrate binding; glycosyltransferase associated; KEGG: afw:Anae109_4026 glycosyltransferase YP_003012009.1 KEGG: bar:GBAA3371 hypothetical protein YP_003012010.1 PFAM: Luciferase-like monooxygenase; KEGG: ara:Arad_3301 oxidoreductase protein YP_003012011.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: baa:BA_1879 MarR family YP_003012012.1 PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH1966 metal-tetracycline/H+ antiporter YP_003012013.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA5454 LysR family transcriptional regulator YP_003012014.1 PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dal:Dalk_5269 hypothetical protein YP_003012015.1 PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: swd:Swoo_4641 ATPase central domain-containing protein YP_003012016.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ilo:IL2539 threonine aldolase YP_003012017.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein YP_003012019.1 PFAM: thioesterase superfamily protein; KEGG: bsu:BSU13030 hypothetical protein YP_003012020.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: hch:HCH_02314 inosine-uridine nucleoside N-ribohydrolase YP_003012021.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bha:BH2877 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) YP_003012022.1 PFAM: haloacid dehalogenase; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: tdn:Suden_2078 HAD superfamily hydrolase YP_003012023.1 KEGG: bsu:BSU39040 hypothetical protein YP_003012024.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: asa:ASA_3746 membrane-bound metal-dependent hydrolase YP_003012025.1 KEGG: bsu:BSU18060 hypothetical protein YP_003012027.1 PFAM: metallophosphoesterase; KEGG: bsu:BSU13370 hypothetical protein YP_003012028.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: sfu:Sfum_2125 phosphodiesterase, MJ0936 family YP_003012029.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: wsu:WS1120 transcriptional regulator YP_003012030.1 KEGG: hypothetical protein YP_003012031.1 KEGG: gme:Gmet_2237 methylmalonyl-CoA epimerase YP_003012032.1 KEGG: afw:Anae109_0100 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; amidohydrolase YP_003012033.1 PFAM: aminotransferase class V; KEGG: bsu:BSU32520 hypothetical protein YP_003012034.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_003012035.1 Plays a crucial role on both purine and pyrimidine metabolism YP_003012036.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: transthyretin; KEGG: sme:SM_b20872 transthyretin-like protein YP_003012037.1 KEGG: bha:BH0759 uricase; TIGRFAM: urate oxidase; PFAM: Uricase YP_003012038.1 TIGRFAM: OHCU decarboxylase; KEGG: bpd:BURPS668_2387 hypothetical protein YP_003012039.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bha:BH0749 4-hydroxybenzoyl-CoA reductase YP_003012040.1 TIGRFAM: xanthine dehydrogenase D subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bha:BH0748 xanthine dehydrogenase YP_003012041.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bha:BH0747 hypothetical protein YP_003012042.1 PFAM: inner-membrane translocator; KEGG: mmw:Mmwyl1_1924 inner-membrane translocator YP_003012043.1 PFAM: inner-membrane translocator; KEGG: dps:DP0678 sugar ABC transporter permease YP_003012044.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU31550 hypothetical protein YP_003012045.1 PFAM: basic membrane lipoprotein; KEGG: hch:HCH_01105 uncharacterized ABC-type transporter, periplasmic component/surface lipoprotein YP_003012046.1 KEGG: bid:Bind_2901 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003012047.1 PFAM: protein of unknown function DUF182; KEGG: bha:BH1974 hypothetical protein YP_003012048.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline YP_003012049.1 PFAM: purine catabolism PurC domain protein; KEGG: bha:BH0757 hypothetical protein YP_003012050.1 PFAM: copper amine oxidase domain protein; KEGG: aha:AHA_0837 alpha-amylase YP_003012051.1 PFAM: beta-lactamase; KEGG: bar:GBAA2750 hypothetical protein YP_003012052.1 PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA4961 EmrB/QacA family drug resistance transporter YP_003012053.1 PFAM: hypothetical protein; KEGG: bar:GBAA5082 DedA family protein YP_003012055.1 KEGG: bar:GBAA4018 hypothetical protein YP_003012056.1 KEGG: baa:BA_1925 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: bacitracin resistance protein BacA YP_003012057.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bar:GBAA3422 CBS domain-containing protein YP_003012058.1 KEGG: Os01g0613300; hypothetical protein YP_003012059.1 KEGG: bar:GBAA3590 hypothetical protein YP_003012060.1 PFAM: nitric oxide synthase NOS; KEGG: bha:BH0823 nitric oxide synthase YP_003012061.1 PFAM: disulfide bond formation protein DsbB; KEGG: bsu:BSU33470 thiol-disulfide oxidoreductase YP_003012062.1 PFAM: DSBA oxidoreductase; KEGG: baa:BA_1116 DSBA oxidoreductase YP_003012063.1 PFAM: protein of unknown function DUF1294; KEGG: bsu:BSU28840 hypothetical protein YP_003012064.1 KEGG: rce:RC1_1438 ATP-dependent helicase protein, TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; SMART: helicase; DEAD-like helicase YP_003012066.1 TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: bsu:BSU08000 hypothetical protein YP_003012067.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: afw:Anae109_0319 glutamate--tRNA ligase YP_003012068.1 PFAM: protein of unknown function DUF105; KEGG: bha:BH1587 iron(III) dicitrate transporter (permease) YP_003012069.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: geo:Geob_0040 L-threonine-O-3-phosphate decarboxylase YP_003012070.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mpt:Mpe_B0520 cobalamin-5'-phosphate synthase YP_003012071.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: gsu:GSU2990 cobalamin biosynthesis protein CobD YP_003012072.1 PFAM: cobalbumin biosynthesis protein; KEGG: saz:Sama_0764 cobinamide kinase/cobinamide phosphate guanylyltransferase YP_003012073.1 KEGG: glo:Glov_3082 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003012074.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH1587 iron(III) dicitrate transporter (permease) YP_003012075.1 PFAM: transporter permease; KEGG: bha:BH1586 ferric ion ABC transpoter (permease) YP_003012076.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU33180 hypothetical protein YP_003012077.1 TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bar:GBAA3859 heavy metal-transporting ATPase YP_003012078.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: baa:BA_1363 RHOD, rhodanese homology domain YP_003012079.1 KEGG: bha:BH0859 hypothetical protein YP_003012080.1 PFAM: protein of unknown function DUF74; KEGG: baa:BA_1567 domain of unknown function DUF74 YP_003012081.1 KEGG: bar:GBAA2749 hypothetical protein YP_003012082.1 PFAM: van Willebrand factor A; KEGG: pfo:Pfl01_2034 VanW YP_003012083.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: bha:BH1030 signal peptidase (type I) YP_003012084.1 PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH2311 hypothetical protein YP_003012085.1 PFAM: ABC transporter; cobalt transport protein; SMART: ATPase AAA; KEGG: bsu:BSU01460 cobalt transporter ATP-binding subunit YP_003012086.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: baa:BA_0722 ABC transporter YP_003012087.1 PFAM: BioY protein; KEGG: sfu:Sfum_1749 BioY protein YP_003012088.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: bha:BH0726 hypothetical protein YP_003012089.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bsu:BSU31370 hypothetical protein YP_003012090.1 PFAM: protein of unknown function DUF1333; KEGG: bha:BH2371 hypothetical protein YP_003012091.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_003012092.1 PFAM: propanediol utilization protein; KEGG: pmr:PMI2713 propanediol utilization protein YP_003012093.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_003012094.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: bar:GBAA3910 pyruvate ferredoxin oxidoreductase, subunit alpha YP_003012095.1 PFAM: peptidase M19 renal dipeptidase; KEGG: bar:GBAA3911 renal dipeptidase family protein YP_003012096.1 PFAM: stage V sporulation protein S; KEGG: bsu:BSU16980 required for dehydratation of the spore core and assembly of the coat (stage V sporulation) YP_003012097.1 PFAM: metallophosphoesterase; KEGG: bsu:BSU16970 hypothetical protein YP_003012098.1 KEGG: bha:BH2378 phosphodiesterase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KH type 1 domain protein; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_003012099.1 PFAM: regulatory protein RecX; KEGG: bha:BH0924 recombination regulator RecX YP_003012100.1 KEGG: bha:BH2383 recombinase A; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: ATPase AAA YP_003012101.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; damage inducible protein CinA; KEGG: bar:GBAA3916 competence damage-inducible protein A YP_003012102.1 KEGG: bha:BH2386 phosphatidylglycerophosphate synthase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003012103.1 PFAM: protein of unknown function DUF520; KEGG: bar:GBAA1166 nucleotide-binding protein YP_003012104.1 SMART: helix-turn-helix domain protein; KEGG: bar:GBAA3918 hypothetical protein YP_003012105.1 PFAM: amino acid-binding ACT domain protein; KEGG: bar:GBAA3919 ACT domain-containing protein YP_003012106.1 KEGG: bsu:BSU16880 hypothetical protein YP_003012107.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bar:GBAA3921 3-ketoacyl-(acyl-carrier-protein) reductase YP_003012108.1 PFAM: peptidase M16 domain protein; KEGG: bar:GBAA3922 zinc protease YP_003012109.1 PFAM: peptidase M16 domain protein; KEGG: bha:BH2393 hypothetical protein YP_003012110.1 TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; peptidoglycan-binding protein; KEGG: bar:GBAA2748 spore cortex-lytic enzyme prepeptide YP_003012111.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: bsu:BSU16800 DNA translocase YP_003012113.1 PFAM: peptidase S14 ClpP; KEGG: bha:BH2397 hypothetical protein YP_003012114.1 PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: bha:BH2398 hypothetical protein YP_003012115.1 KEGG: bha:BH1742 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003012116.1 TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; KEGG: bar:GBAA3936 aspartate kinase I YP_003012117.1 involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme YP_003012118.1 catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance YP_003012119.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: avi:Avi_0368 deoxyuridine 5primetriphosphate nucleotidohydrolase YP_003012120.1 PFAM: peptidase M16 domain protein; KEGG: bar:GBAA3942 zinc protease YP_003012121.1 PFAM: polysaccharide deacetylase; KEGG: bha:BH2406 hypothetical protein YP_003012122.1 KEGG: bar:GBAA3944 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein YP_003012123.1 TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: bsu:BSU16680 30S ribosomal protein S15 YP_003012124.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; cytidylyltransferase; riboflavin kinase; KEGG: bsu:BSU16670 bifunctional riboflavin kinase/FMN adenylyltransferase YP_003012125.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: bha:BH2410 tRNA pseudouridine 5S synthase YP_003012126.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: pca:Pcar_1558 exopolyphosphatase related protein YP_003012127.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: bha:BH2411 ribosome-binding factor A YP_003012128.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; KEGG: bha:BH2413 translation initiation factor IF-2 YP_003012129.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: bha:BH2414 hypothetical protein YP_003012130.1 PFAM: protein of unknown function DUF448; KEGG: bha:BH2415 hypothetical protein YP_003012131.1 KEGG: bha:BH2416 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein YP_003012132.1 PFAM: protein of unknown function DUF150; KEGG: bsu:BSU16590 hypothetical protein YP_003012133.1 KEGG: bha:BH2418 DNA polymerase III PolC; TIGRFAM: DNA polymerase III, subunit alpha; DNA polymerase III subunit epsilon; PFAM: DNA polymerase III subunit alpha; exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: exonuclease; phosphoesterase PHP domain protein YP_003012134.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_003012135.1 KEGG: bha:BH2420 hypothetical protein; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein YP_003012136.1 KEGG: bha:BH2421 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003012137.1 PFAM: phosphatidate cytidylyltransferase; KEGG: bar:GBAA3960 phosphatidate cytidylyltransferase YP_003012138.1 KEGG: bha:BH2423 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003012139.1 TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: dds:Ddes_0519 ribosome recycling factor YP_003012140.1 KEGG: bha:BH2425 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003012141.1 TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: gsu:GSU1920 elongation factor Ts YP_003012142.1 TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: bha:BH2427 30S ribosomal protein S2 YP_003012144.1 KEGG: MAML2; mastermind-like 2 (Drosophila) ; K06061 mastermind YP_003012145.1 KEGG: bha:BH2429 hypothetical protein YP_003012146.1 PFAM: protein of unknown function DUF342; KEGG: bha:BH2430 hypothetical protein YP_003012147.1 TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 3 domain protein; KEGG: bsu:BSU16470 RNA polymerase sigma factor SigD YP_003012149.1 PFAM: CheD family protein; KEGG: bha:BH2433 methylation of methyl-accepting chemotaxis protein YP_003012150.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: bha:BH2969 modulation of CheA activity in response to attractants (chemotaxis protein) YP_003012151.1 PFAM: CheW domain protein; P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH2970 two-component sensor histidine kinase involved in chemotaxis YP_003012152.1 PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; KEGG: azo:azo1456 protein glutamate-methylesterase YP_003012153.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bha:BH2436 hypothetical protein YP_003012154.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: bha:BH2437 flagellar biosynthesis regulator FlhF YP_003012155.1 membrane protein involved in the flagellar export apparatus YP_003012156.1 TIGRFAM: flagellar biosynthetic protein FlhB; type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter; KEGG: bsu:BSU16380 flagellar biosynthesis protein FlhB YP_003012157.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: bsu:BSU16370 flagellar biosynthesis protein FliR YP_003012158.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: bha:BH2441 flagellar biosynthesis protein FliQ YP_003012159.1 TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: bha:BH2442 flagellar biosynthesis protein FliP YP_003012160.1 KEGG: bha:BH2443 flagellar protein required for flagellar formation YP_003012161.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bha:BH2444 two-component response regulator involved in modulation of flagellar YP_003012162.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: bha:BH2445 flagellar motor switch protein YP_003012163.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation YP_003012165.1 KEGG: bha:BH2447 flagellar basal body-associated protein FliL YP_003012166.1 PFAM: flagellar FlbD family protein; KEGG: bha:BH2448 hypothetical protein YP_003012167.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: bha:BH2449 flagellar basal body rod protein FlgG YP_003012168.1 TIGRFAM: flagellar operon protein; KEGG: gme:Gmet_3104 hypothetical protein YP_003012169.1 PFAM: flagellar hook capping protein; KEGG: pen:PSEEN3840 flagellar basal body rod modification protein YP_003012170.1 PFAM: flagellar hook-length control protein; KEGG: rru:Rru_A0548 flagellar hook-length control protein YP_003012171.1 KEGG: bha:BH2453 hypothetical protein YP_003012172.1 TIGRFAM: flagellar export protein FliJ; KEGG: dvm:DvMF_1393 flagellar export protein FliJ YP_003012173.1 KEGG: bha:BH2455 flagellum-specific ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; SMART: ATPase AAA YP_003012174.1 PFAM: flagellar assembly protein FliH; KEGG: bha:BH2456 flagellar assembly protein H YP_003012175.1 One of three proteins involved in switching the direction of the flagellar rotation YP_003012176.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_003012177.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: mms:mma_1442 flagellar hook-basal body protein FliE YP_003012178.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: bsu:BSU16190 flagellar basal body rod protein FlgC YP_003012179.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: bha:BH2461 flagellar basal body rod protein FlgB YP_003012180.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_003012181.1 KEGG: bha:BH2463 ATP-dependent protease ATP-binding subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase HslU; PFAM: ATPase AAA; SMART: ATPase AAA YP_003012182.1 heat shock protein involved in degradation of misfolded proteins YP_003012183.1 KEGG: bsu:BSU16130 tRNA (uracil-5-)-methyltransferase Gid; TIGRFAM: gid protein; PFAM: glucose-inhibited division protein A YP_003012184.1 KEGG: bha:BH2467 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003012185.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: gme:Gmet_0890 smf protein YP_003012186.1 TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding protein; KEGG: bha:BH2469 succinyl-CoA synthetase subunit alpha YP_003012187.1 KEGG: bha:BH2470 succinyl-CoA synthetase subunit beta; TIGRFAM: succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003012188.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: aba:acid345_3233 Mg chelatase-related protein YP_003012189.1 PFAM: protein of unknown function UPF0102; KEGG: hch:HCH_05895 endonuclease YP_003012190.1 KEGG: dal:Dalk_0995 flagellar biosynthetic protein FlhB YP_003012191.1 KEGG: bha:BH2474 hypothetical protein YP_003012192.1 KEGG: bar:GBAA2670 hypothetical protein YP_003012193.1 PFAM: ribonuclease HII/HIII; KEGG: aca:ACP_2802 ribonuclease HII YP_003012194.1 PFAM: GTP-binding protein HSR1-related; KEGG: bar:GBAA3976 ribosomal biogenesis GTPase YP_003012195.1 KEGG: bha:BH1030 signal peptidase (type I); TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_003012196.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: bha:BH2478 50S ribosomal protein L19 YP_003012197.1 PFAM: complement C1q protein; KEGG: bar:GBAA2334 hypothetical protein YP_003012198.1 PFAM: complement C1q protein; SMART: complement C1q protein; KEGG: bar:GBAA2334 hypothetical protein YP_003012199.1 KEGG: bar:GBAA3979 tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003012200.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: bar:GBAA3980 16S rRNA-processing protein YP_003012201.1 KEGG: bha:BH2482 hypothetical protein YP_003012202.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: bsu:BSU15990 30S ribosomal protein S16 YP_003012203.1 KEGG: bha:BH2484 signal recognition particle; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_003012204.1 PFAM: helix-turn-helix protein YlxM/p13 family protein; Bacterio-opsin activator HTH domain protein; KEGG: bar:GBAA3984 hypothetical protein YP_003012205.1 KEGG: bar:GBAA3985 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_003012206.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: bha:BH2487 chromosome segregation SMC protein YP_003012207.1 KEGG: bar:GBAA3987 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_003012208.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: bsu:BSU11340 3-oxoacyl-(acyl carrier protein) synthase II YP_003012209.1 carries the fatty acid chain in fatty acid biosynthesis YP_003012210.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bsu:BSU15910 beta-ketoacyl-acyl carrier protein reductase YP_003012211.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: bha:BH2492 acyl-carrier-protein S-malonyltransferase YP_003012212.1 KEGG: baa:BA_1722 chalcone and stilbene synthases, C-terminal domain; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein YP_003012213.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: bsu:BSU15890 glycerol-3-phosphate acyltransferase PlsX YP_003012214.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria YP_003012215.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: bha:BH2583 50S ribosomal protein L32 YP_003012216.1 PFAM: protein of unknown function DUF177; KEGG: ade:Adeh_2753 hypothetical protein YP_003012217.1 PFAM: protein of unknown function DUF795; KEGG: bha:BH2585 hypothetical protein YP_003012218.1 KEGG: bar:GBAA4136 PDZ domain-containing protein YP_003012219.1 KEGG: bsu:BSU15030 hypothetical protein YP_003012220.1 KEGG: bar:GBAA4139 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase; PFAM: cytidylyltransferase YP_003012221.1 TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase KEGG: bha:BH2590 hypothetical protein YP_003012222.1 KEGG: bsu:BSU19110 hypothetical protein YP_003012223.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bsu:BSU14040 hypothetical protein YP_003012224.1 PFAM: mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: pmr:PMI1646 peptidoglycan hydrolase (muramidase) YP_003012225.1 PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: bar:GBAA0222 TatD family deoxyribonuclease YP_003012226.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: azc:AZC_2445 ABC transporter ATP-binding protein YP_003012227.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: prw:PsycPRwf_1445 binding-protein-dependent transporters inner membrane component YP_003012228.1 PFAM: protein of unknown function DUF77; KEGG: baa:BA_0956 protein of unknown function DUF77 YP_003012229.1 PFAM: NMT1/THI5 like domain protein; KEGG: baa:BA_0958 hypothetical protein predicted by GeneMark YP_003012230.1 PFAM: glycosyl transferase group 1; KEGG: xcc:XCC0599 glycosyltransferase YP_003012231.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; polysaccharide biosynthesis protein CapD; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: reu:Reut_A0719 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase YP_003012232.1 PFAM: nucleotidyl transferase; KEGG: sat:SYN_01031 mannose-1-phosphate guanylyltransferase YP_003012233.1 KEGG: bar:GBAA4978 triple helix repeat-containing collagen YP_003012235.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_3740 glycosyl transferase family 2 YP_003012236.1 PFAM: glycosyl transferase family 2; KEGG: baa:BA_1075 glycos_transf_2, glycosyl transferase YP_003012237.1 KEGG: baa:BA_2275 hypothetical protein YP_003012238.1 KEGG: rbo:A1I_03215 capsular polysaccharide biosynthesis protein YP_003012239.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_3058 glycosyl transferase, group 1 YP_003012240.1 KEGG: dol:Dole_1969 glycosyl transferase group 1 YP_003012241.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ccs:CCNA_01063 UDP-perosamine 4-acetyl transferase YP_003012242.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ccs:CCNA_01064 perosamine synthetase YP_003012243.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A2731 GDP-mannose 4,6-dehydratase YP_003012244.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: bar:GBAA3706 hypothetical protein YP_003012245.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2601 acetyltransferase YP_003012246.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate YP_003012247.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: bha:BH2168 DeoR family transcriptional regulator YP_003012248.1 TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypy:YPK_1803 2-deoxy-D-gluconate 3-dehydrogenase YP_003012249.1 PFAM: peptidase M56 BlaR1; KEGG: bar:GBAA1079 hypothetical protein YP_003012250.1 PFAM: Penicillinase repressor; KEGG: swd:Swoo_3737 CopY family transcriptional regulator YP_003012251.1 PFAM: chloride channel core; KEGG: rso:RSc1803 hypothetical protein YP_003012252.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU06990 hypothetical protein YP_003012253.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU06980 hypothetical protein YP_003012254.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU06970 hypothetical protein YP_003012255.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003012256.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003012257.1 PFAM: carbohydrate kinase FGGY; KEGG: sus:acid_3424 carbohydrate kinase, FGGY YP_003012258.1 catalyzes the formation of L-rhamnulose from L-rhamnose YP_003012259.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; class II aldolase/adducin family protein; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bha:BH1550 short chain dehydrogenase YP_003012260.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: avi:Avi_5395 hypothetical protein YP_003012261.1 PFAM: xylose isomerase; KEGG: avi:Avi_5396 hypothetical protein YP_003012262.1 PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003012263.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bar:GBAA2997 IclR family transcriptional regulator YP_003012265.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine YP_003012266.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bsu:BSU36510 ammonium transporter YP_003012267.1 PFAM: nitrogen regulatory protein P-II; KEGG: bmn:BMA10247_2827 nitrogen regulatory protein P-II YP_003012268.1 PFAM: glutamine amidotransferase; KEGG: noc:Noc_2237 glutamine amidotransferase YP_003012269.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sml:Smlt3123 capsular polysaccharide biosynthesis protein YP_003012270.1 KEGG: bar:GBAA4238 hypothetical protein YP_003012271.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis YP_003012272.1 PFAM: transposase IS4 family protein; KEGG: bha:BH1427 transposase (08) YP_003012273.1 PFAM: glycoside hydrolase family 30; carbohydrate binding family 6; S-layer domain protein; hypothetical protein; Fibronectin type III domain protein; SMART: cellulose binding type IV; Fibronectin type III domain protein; Ig domain protein group 2 domain protein; KEGG: rfr:Rfer_1106 glycoside hydrolase family protein YP_003012275.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: baa:BA_1216 hypothetical protein YP_003012276.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: baa:BA_1217 hypothetical protein YP_003012277.1 PFAM: GerA spore germination protein; KEGG: baa:BA_1218 hypothetical protein YP_003012278.1 PFAM: Collagen triple helix repeat; KEGG: COL1A2; collagen, type I, alpha 2 ; K06236 collagen, type I/II/III/V/XI, alpha YP_003012279.1 PFAM: transcription activator effector binding; KEGG: bha:BH3633 hypothetical protein YP_003012280.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: baa:BA_0141 adh_short, short chain dehydrogenase YP_003012281.1 KEGG: bha:BH1870 hypothetical protein YP_003012282.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: avi:Avi_5122 transcriptional regulator AraC family YP_003012283.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: par:Psyc_1446 LuxR family transcriptional regulator YP_003012284.1 PFAM: S-layer domain protein; Kelch repeat protein; Kelch repeat-containing protein; SMART: Kelch repeat-containing protein; KEGG: rso:RS05070 hemagglutinin/hemolysin-related protein YP_003012285.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: stm:STM4423 DNA-binding protein YP_003012286.1 PFAM: FG-GAP repeat protein; KEGG: sus:acid_7682 FG-GAP repeat-containing protein YP_003012287.1 PFAM: oxidoreductase; KEGG: bja:blr5436 hypothetical protein YP_003012288.1 PFAM: beta-lactamase; KEGG: pla:Plav_0831 beta-lactamase YP_003012289.1 KEGG: bha:BH0842 hypothetical protein YP_003012290.1 PFAM: amidohydrolase 2; KEGG: pat:Patl_0798 amidohydrolase 2 YP_003012291.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: pat:Patl_0797 alcohol dehydrogenase GroES-like protein YP_003012292.1 PFAM: aldo/keto reductase; KEGG: pat:Patl_0799 aldo/keto reductase YP_003012293.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: psb:Psyr_2441 helix-turn-helix, AraC type YP_003012294.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: hypothetical protein YP_003012295.1 PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003012296.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: bja:blr4705 hypothetical protein YP_003012297.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3702 transcriptional regulator YP_003012298.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: bha:BH2723 beta-galactosidase YP_003012299.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ret:RHE_CH01980 hydrolase protein YP_003012300.1 PFAM: dihydrodipicolinate synthetase; KEGG: bsu:BSU16770 dihydrodipicolinate synthase YP_003012301.1 PFAM: protein of unknown function DUF1680; KEGG: sus:acid_3381 hypothetical protein YP_003012302.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: bar:GBAA4285 HAD family hydrolase YP_003012303.1 PFAM: oxidoreductase; KEGG: bha:BH1248 NADH-dependent dyhydrogenase YP_003012304.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: vei:Veis_0801 alcohol dehydrogenase YP_003012305.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: pmu:PM0151 RbsR YP_003012306.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sme:SM_b20969 sugar uptake ABC transporter permease YP_003012307.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1118 lactose transporter (permease) YP_003012308.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein YP_003012309.1 PFAM: aminotransferase class I and II; KEGG: ypg:YpAngola_A2760 aminotransferase, classes I and II YP_003012310.1 PFAM: Benzoate membrane transporter; xanthine/uracil/vitamin C permease; KEGG: dvm:DvMF_2241 benzoate transporter YP_003012311.1 TIGRFAM: gluconate kinase; PFAM: carbohydrate kinase FGGY; KEGG: bar:GBAA3428 gluconate kinase YP_003012312.1 TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: rpi:Rpic_4193 gluconate transporter YP_003012313.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003012314.1 PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012315.1 PFAM: extracellular solute-binding protein family 1; KEGG: rfr:Rfer_0954 extracellular solute-binding protein YP_003012316.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH1869 hypothetical protein YP_003012317.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bha:BH1861 alpha-L-arabinofuranosidase YP_003012318.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU17760 hypothetical protein YP_003012319.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU07780 hypothetical protein YP_003012320.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU07790 hypothetical protein YP_003012321.1 PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: bpy:Bphyt_1694 epoxide hydrolase domain protein YP_003012322.1 PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003012323.1 PFAM: periplasmic binding protein; KEGG: bha:BH3890 ferrichrome ABC transporter (ferrichrome-binding protein) YP_003012324.1 PFAM: glycosyl hydrolase family 32; KEGG: lch:Lcho_3297 beta-fructofuranosidase YP_003012325.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2113 ABC transporter (permease) YP_003012326.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_003012327.1 KEGG: hypothetical protein YP_003012328.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2728 two-component response regulator YP_003012329.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012330.1 PFAM: alpha-L-arabinofuranosidase domain protein; carbohydrate-binding CenC domain protein; KEGG: hypothetical protein YP_003012331.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU02220 hypothetical protein YP_003012332.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: bpd:BURPS668_0790 mitomycin antibiotics/polyketide fumonisin biosynthesis protein YP_003012333.1 KEGG: bha:BH0923 hypothetical protein YP_003012334.1 PFAM: APHP domain protein; carbohydrate binding family 6; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; cellulose binding type IV; Parallel beta-helix repeat; KEGG: similar to syntaxin binding protein YP_003012335.1 PFAM: amidohydrolase; KEGG: bar:GBAA4727 deaminase YP_003012336.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcn:Bcen_1883 ABC transporter YP_003012337.1 PFAM: ABC transporter; inner-membrane translocator; SMART: ATPase AAA; KEGG: oca:OCAR_7472 ABC branched chain amino acid family transporter YP_003012338.1 PFAM: inner-membrane translocator; KEGG: har:HEAR2681 high-affinity branched-chain amino acid ABC transporter membrane protein YP_003012339.1 PFAM: extracellular ligand-binding receptor; KEGG: har:HEAR2682 ABC-type branched-chain amino acid transporters YP_003012340.1 PFAM: amidohydrolase; amidohydrolase; KEGG: pen:PSEEN3598 amidohydrolase YP_003012341.1 PFAM: purine catabolism PurC domain protein; KEGG: bha:BH0757 hypothetical protein YP_003012342.1 KEGG: hypothetical protein YP_003012343.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; KEGG: cko:CKO_00819 cobyric acid synthase YP_003012344.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mca:MCA0894 ABC transporter ATP-binding/permease YP_003012345.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mca:MCA0894 ABC transporter ATP-binding/permease YP_003012346.1 PFAM: glycoside hydrolase, family 20, catalytic core; KEGG: hypothetical protein YP_003012347.1 PFAM: glycoside hydrolase; KEGG: mmw:Mmwyl1_0214 glycoside hydrolase family 3 protein YP_003012348.1 PFAM: glycoside hydrolase; KEGG: sal:Sala_1014 glycoside hydrolase family protein YP_003012349.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003012350.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003012351.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003012352.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003012353.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012354.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) YP_003012355.1 PFAM: type III effector Hrp-dependent outers; KEGG: dde:Dde_0128 hypothetical protein YP_003012356.1 transports degraded pectin products into the bacterial cell YP_003012357.1 PFAM: Propionate catabolism activator domain protein; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: see:SNSL254_A0709 sigma-54 dependent transcriptional regulator YP_003012358.1 PFAM: AraC-type transcriptional regulator; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: glo:Glov_3538 AraC family transcriptional regulator YP_003012359.1 PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_2443 major facilitator transporter YP_003012360.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: bsu:BSU29570 small acid-soluble spore protein (alpha-type SASP) YP_003012361.1 PFAM: protein of unknown function DUF1680; KEGG: ecf:ECH74115_4952 hypothetical protein YP_003012362.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003012365.1 KEGG: bsu:BSU12150 hypothetical protein YP_003012366.1 KEGG: bar:GBAA2712 hypothetical protein YP_003012368.1 PFAM: protein of unknown function UPF0118; KEGG: baa:BA_0546 UPF0118, domain of unknown function DUF20 YP_003012369.1 PFAM: GCN5-related N-acetyltransferase; KEGG: baa:BA_2136 acetyltransf, acetyltransferase (GNAT) family YP_003012370.1 KEGG: bha:BH0842 hypothetical protein YP_003012371.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0481 ABC transporter (permiase) YP_003012372.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atu:Atu3022 ABC transporter membrane spanning protein (sugar) YP_003012373.1 PFAM: extracellular solute-binding protein family 1; KEGG: atu:Atu3024 ABC transporter transmembrane protein (sugar) YP_003012374.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003012377.1 SMART: regulatory protein MerR; KEGG: scl:sce2129 MerR family transcriptional regulator YP_003012378.1 PFAM: oxidoreductase; KEGG: ara:Arad_4618 oxidoreducatse protein YP_003012379.1 PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein YP_003012381.1 KEGG: oan:Oant_3386 hypothetical protein YP_003012382.1 PFAM: amidohydrolase 2; KEGG: dac:Daci_4537 amidohydrolase 2 YP_003012383.1 PFAM: oxidoreductase; KEGG: acr:Acry_1061 oxidoreductase domain-containing protein YP_003012384.1 PFAM: xylose isomerase; KEGG: sme:SMc00267 hypothetical protein YP_003012385.1 PFAM: GntR family transcriptional regulator; GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bpa:BPP3522 transcriptional regulator YP_003012386.1 PFAM: regulatory protein ArsR; regulatory protein MarR; SMART: regulatory protein ArsR; KEGG: bha:BH1869 hypothetical protein YP_003012387.1 PFAM: glycoside hydrolase family 43; KEGG: xylosidase/arabinosidase; K01238 YP_003012388.1 PFAM: GCN5-related N-acetyltransferase YP_003012389.1 TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU05680 hypothetical protein YP_003012390.1 PFAM: alpha-L-rhamnosidase; KEGG: hypothetical protein YP_003012391.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: maq:Maqu_2134 AraC protein, arabinose-binding/dimerisation YP_003012392.1 PFAM: S-layer domain protein; cellulosome anchoring protein cohesin region; KEGG: hypothetical protein YP_003012393.1 PFAM: glycoside hydrolase; carbohydrate binding family 6; Ig family protein; SMART: cellulose binding type IV; KEGG: hypothetical protein YP_003012394.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_4465 sugar ABC transporter YP_003012395.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ret:RHE_PC00038 sugar ABC transporter permease protein YP_003012396.1 PFAM: extracellular solute-binding protein family 1; KEGG: rlt:Rleg2_5608 extracellular solute-binding protein family 1 YP_003012398.1 PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; KEGG: bha:BH0792 two-component sensor histidine kinase YP_003012399.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003012400.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: hypothetical protein YP_003012401.1 PFAM: extracellular solute-binding protein family 1; KEGG: atu:Atu3024 ABC transporter transmembrane protein (sugar) YP_003012402.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003012403.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_003012404.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003012405.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012406.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mno:Mnod_8333 short-chain dehydrogenase/reductase SDR YP_003012407.1 PFAM: regulatory protein TetR; KEGG: ppw:PputW619_2194 TetR family transcriptional regulator YP_003012408.1 PFAM: aldo/keto reductase; KEGG: rec:RHECIAT_CH0003130 oxidoreductase protein YP_003012409.1 PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bte:BTH_II2041 Cu(I)-responsive transcriptional regulator YP_003012410.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_003012411.1 PFAM: protein of unknown function DUF204; KEGG: bar:GBAA0495 hypothetical protein YP_003012412.1 PFAM: major facilitator superfamily MFS_1; KEGG: hhe:HH1454 hypothetical protein YP_003012413.1 PFAM: cupin; KEGG: aca:ACP_0204 hypothetical protein YP_003012414.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bsu:BSU27010 NADP-dependent alcohol dehydrogenase YP_003012415.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA3115 TetR family transcriptional regulator YP_003012416.1 KEGG: bsu:BSU15190 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase family 4 YP_003012418.1 PFAM: extracellular solute-binding protein family 1; KEGG: cja:CJA_3468 bacterial extracellular solute-binding protein YP_003012419.1 KEGG: hypothetical protein YP_003012420.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_4465 sugar ABC transporter YP_003012421.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: scl:sce3058 sugar ABC transporter permease YP_003012422.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH3842 two-component response regulator YP_003012423.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012424.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sus:acid_1479 LacI family transcription regulator YP_003012425.1 PFAM: transposase IS4 family protein; KEGG: bha:BH1427 transposase (08) YP_003012427.1 KEGG: Os02g0709900; hypothetical protein YP_003012429.1 KEGG: shn:Shewana3_3388 hypothetical protein YP_003012430.1 PFAM: protein of unknown function DUF464; KEGG: bha:BH3010 hypothetical protein YP_003012432.1 KEGG: hypothetical protein YP_003012434.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bha:BH2923 transcriptional regulator involved in carbon catabolite control YP_003012435.1 KEGG: vha:VIBHAR_06682 nucleotidase YP_003012436.1 KEGG: pca:Pcar_0906 ATP-binding component of dipeptide transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003012437.1 KEGG: mes:Meso_4488 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003012438.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rec:RHECIAT_PA0000041 probable oligopeptide ABC transporter permease YP_003012439.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: smd:Smed_5557 binding-protein-dependent transport systems inner membrane component YP_003012440.1 PFAM: extracellular solute-binding protein family 5; KEGG: avi:Avi_5515 ABC transporter substrate binding protein (oligopeptide) YP_003012441.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30290 maltose transporter YP_003012442.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: vei:Veis_4548 binding-protein-dependent transport systems inner membrane component YP_003012443.1 PFAM: extracellular solute-binding protein family 1; KEGG: rlt:Rleg2_5608 extracellular solute-binding protein family 1 YP_003012444.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bsu:BSU06960 hypothetical protein YP_003012445.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012446.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bar:GBAA1126 EamA family protein YP_003012447.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bha:BH2117 LysR family transcriptional regulator YP_003012448.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1913 hypothetical protein YP_003012449.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1912 transmembrane lipoprotein YP_003012450.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1911 transmembrane lipoprotein YP_003012451.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vvy:VVA0144 AraC-type DNA-binding domain-containing protein YP_003012452.1 KEGG: bsu:BSU10470 hypothetical protein YP_003012453.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_003012454.1 KEGG: bar:GBAA3881 hypothetical protein YP_003012455.1 PFAM: protein of unknown function DUF159; KEGG: bsu:BSU20490 hypothetical protein YP_003012457.1 KEGG: bar:GBAA3993 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase YP_003012458.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bsu:BSU35480 hypothetical protein YP_003012459.1 PFAM: Dak phosphatase; KEGG: bsu:BSU15840 hypothetical protein YP_003012460.1 PFAM: protein of unknown function DUF322; KEGG: bsu:BSU15830 hypothetical protein YP_003012461.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: bha:BH2500 50S ribosomal protein L28 YP_003012462.1 PFAM: stage V sporulation family protein; KEGG: bha:BH2501 stage V sporulation protein YP_003012464.1 KEGG: bar:GBAA3998 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003012465.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: bar:GBAA3999 ribosome-associated GTPase YP_003012466.1 PFAM: serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bha:BH2504 serine/threonine protein kinase YP_003012467.1 KEGG: bha:BH2505 hypothetical protein; PFAM: protein phosphatase 2C-like; stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_003012468.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_003012469.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: bha:BH2507 hypothetical protein YP_003012470.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: bsu:BSU15730 methionyl-tRNA formyltransferase YP_003012471.1 KEGG: bar:GBAA4005 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003012472.1 KEGG: bha:BH2509 primosome assembly protein PriA; TIGRFAM: primosomal protein N'; PFAM: type III restriction protein res subunit; DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase YP_003012473.1 KEGG: bha:BH2510 flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003012474.1 PFAM: heat shock protein DnaJ domain protein; KEGG: hypothetical protein YP_003012475.1 KEGG: jan:Jann_0053 HAD family hydrolase YP_003012476.1 PFAM: protein of unknown function DUF162; KEGG: bha:BH1834 hypothetical protein YP_003012477.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: bar:GBAA3269 iron-sulfur cluster-binding protein YP_003012478.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bar:GBAA3270 hypothetical protein YP_003012479.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bsu:BSU31210 hypothetical protein YP_003012480.1 TIGRFAM: DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6; KEGG: bha:BH2511 DNA-directed RNA polymerase subunit omega YP_003012481.1 Essential for recycling GMP and indirectly, cGMP YP_003012482.1 PFAM: protein of unknown function DUF370; KEGG: bha:BH2513 hypothetical protein YP_003012483.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions YP_003012484.1 KEGG: gsu:GSU0531 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003012485.1 TIGRFAM: calcium-translocating P-type ATPase, PMCA-type; ATPase P; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; KEGG: bha:BH2515 cation-transporting ATPase YP_003012486.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bha:BH2516 fibronectin/fibrinogen-binding protein YP_003012487.1 PFAM: NLP/P60 protein; KEGG: azo:azo2203 lipoprotein precusor YP_003012488.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ank:AnaeK_1266 PHP domain protein YP_003012489.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tgr:Tgr7_0820 LysR family transcriptional regulator YP_003012491.1 KEGG: bar:GBAA4142 hypothetical protein YP_003012492.1 PFAM: protein of unknown function DUF1333; KEGG: bha:BH2596 hypothetical protein YP_003012493.1 KEGG: hypothetical protein YP_003012494.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: rad25; DNA repair helicase ; K10843 DNA excision repair protein ERCC-3 YP_003012495.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: bar:GBAA0720 CBS domain-containing protein YP_003012496.1 KEGG: bha:BH1613 N-acyl-L-amino acid amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003012497.1 KEGG: bsu:BSU14940 hypothetical protein YP_003012498.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: bar:GBAA4050 stage V sporulation protein E YP_003012499.1 PFAM: protein of unknown function DUF322; KEGG: bar:GBAA4407 hypothetical protein YP_003012500.1 TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: baa:BA_0996 Ca2+:cation antiporter, CaCA family YP_003012501.1 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein YP_003012502.1 PFAM: phosphoryl transfer system HPr; KEGG: dde:Dde_1090 HPrNtr YP_003012503.1 PFAM: peptidase M29 aminopeptidase II; KEGG: bar:GBAA4933 aminopeptidase YP_003012505.1 KEGG: bsu:BSU29650 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein YP_003012506.1 KEGG: bha:BH3209 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003012507.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: bha:BH2887 hypothetical protein YP_003012508.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: bsu:BSU31010 hypothetical protein YP_003012509.1 KEGG: bsu:BSU31020 hypothetical protein YP_003012511.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: bha:BH3229 penicillin-binding protein 1A YP_003012512.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_003012513.1 KEGG: bsu:BSU29690 acetoin dehydrogenase YP_003012514.1 PFAM: histone deacetylase superfamily; KEGG: bsu:BSU29710 acetoin dehydrogenase YP_003012515.1 PFAM: purine or other phosphorylase family 1; KEGG: bha:BH3238 5'-methylthioadenosine/S-adenosylhomocysteine nuclosidase YP_003012516.1 KEGG: bha:BH3241 transcriptional regulator involved in carbon catabolite control; TIGRFAM: catabolite control protein A; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003012518.1 KEGG: sat:SYN_03077 hypothetical protein YP_003012519.1 TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: dvl:Dvul_1234 PfpI family intracellular peptidase YP_003012520.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: bha:BH3073 PTS system, enzyme I YP_003012521.1 TIGRFAM: PTS system, glucose subfamily, IIsubunit alpha; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; KEGG: bsu:BSU02350 phosphotransferase system (PTS) glucosamine-specific enzyme IICBA component YP_003012522.1 PFAM: CoA-binding protein; KEGG: bar:GBAA3659 CoA-binding domain-containing protein YP_003012523.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_003012524.1 PFAM: shikimate kinase; KEGG: gbm:Gbem_1555 shikimate kinase YP_003012526.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bsu:BSU23860 6-phosphogluconate dehydrogenase YP_003012527.1 KEGG: bha:BH2908 hypothetical protein YP_003012528.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; anticodon-binding domain protein; KEGG: gme:Gmet_1354 prolyl-tRNA synthetase YP_003012529.1 PFAM: protein of unknown function DUF1054; KEGG: bha:BH2637 hypothetical protein YP_003012530.1 PFAM: acriflavin resistance protein; KEGG: bar:GBAA0719 AcrB/AcrD/AcrF family transporter YP_003012531.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA2541 ABC transporter ATP-binding protein YP_003012532.1 PFAM: ABC transporter; KEGG: bar:GBAA2542 ABC transporter permease YP_003012533.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA2543 TetR family transcriptional regulator YP_003012534.1 PFAM: protein of unknown function DUF161; KEGG: bha:BH3604 hypothetical protein YP_003012535.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bha:BH1174 multidrug-efflux transporter YP_003012536.1 PFAM: Orn/Lys/Arg decarboxylase major region; aminotransferase class I and II; Orn/Lys/Arg decarboxylase domain protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; KEGG: bsu:BSU14630 arginine decarboxylase YP_003012537.1 KEGG: bar:GBAA4178 hypothetical protein YP_003012538.1 PFAM: protein of unknown function DUF1292; KEGG: avi:Avi_2641 hypothetical protein YP_003012540.1 KEGG: bha:BH2261 hypothetical protein YP_003012541.1 PFAM: beta-lactamase; KEGG: lpc:LPC_3284 beta-lactamase superfamily hydrolase YP_003012542.1 KEGG: bar:GBAA3064 hypothetical protein YP_003012545.1 PFAM: blue (type 1) copper domain protein; Secreted repeat of unknown function; KEGG: glo:Glov_3032 secreted repeat of unknown function YP_003012546.1 PFAM: blue (type 1) copper domain protein; KEGG: aba:acid345_1788 plastocyanin-like protein YP_003012547.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: aba:acid345_0545 sigma-24, ECF subfamily YP_003012548.1 KEGG: aca:ACP_0644 hypothetical protein YP_003012549.1 PFAM: cupin; KEGG: bha:BH0377 hypothetical protein YP_003012550.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1910 two-component response regulator YP_003012551.1 PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012552.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH2226 multiple sugar transporter (multiple sugar-binding protein) YP_003012553.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_4466 sugar ABC transporter YP_003012554.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ret:RHE_PC00037 sugar ABC transporter substrate-binding protein YP_003012556.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bsu:BSU05470 hypothetical protein YP_003012557.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_3740 glycosyl transferase family 2 YP_003012558.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: nucleotidyl transferase; KEGG: bav:BAV1255 glucose-1-phosphate cytidylyltransferase YP_003012559.1 TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; polysaccharide biosynthesis protein CapD; KEGG: sat:SYN_02648 CDP-glucose 4,6-dehydratase YP_003012560.1 PFAM: C-methyltransferase; methyltransferase domain protein; methyltransferase type 12; KEGG: rpe:RPE_4255 C-methyltransferase YP_003012561.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: mpo:Mpop_0773 dTDP-4-dehydrorhamnose 3,5-epimerase YP_003012562.1 KEGG: sme:SM_b21427 acetyltransferase protein YP_003012563.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: vei:Veis_4415 NAD-dependent epimerase/dehydratase YP_003012564.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003012565.1 TIGRFAM: uracil-DNA glycosylase; PFAM: uracil-DNA glycosylase superfamily; KEGG: bsu:BSU37970 uracil-DNA glycosylase YP_003012566.1 KEGG: bha:BH0863 ribonuclease H-related protein YP_003012567.1 KEGG: bha:BH1442 hypothetical protein YP_003012568.1 similar to 2'-5' RNA ligase YP_003012569.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein YP_003012570.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: acp:A2cp1_2841 ABC transporter YP_003012571.1 PFAM: protein of unknown function DUF214; KEGG: hypothetical protein YP_003012572.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: yen:YE1200 HlyD family secretion protein YP_003012573.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: xca:xccb100_4100 ABC transporter ATP-binding protein YP_003012574.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: baa:BA_1133 methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer) YP_003012575.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bha:BH2532 orotate phosphoribosyltransferase YP_003012576.1 KEGG: bar:GBAA4022 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003012577.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; MGS domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl-phosphate synthetase large chain domain protein; KEGG: bha:BH2536 carbamoyl phosphate synthase large subunit YP_003012578.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase; KEGG: bsu:BSU15510 carbamoyl phosphate synthase small subunit YP_003012579.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; amidohydrolase; KEGG: bha:BH2538 dihydroorotase YP_003012580.1 KEGG: bsu:BSU15490 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003012581.1 PFAM: phosphoribosyltransferase; KEGG: bsu:BSU15470 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_003012582.1 PFAM: aminotransferase class I and II; KEGG: bsu:BSU14000 aminotransferase A YP_003012583.1 KEGG: bar:GBAA4193 M20/M25/M40 family peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003012584.1 PFAM: tetrahydrodipicolinate succinyltransferase domain protein; transferase; KEGG: bha:BH2669 tetrahydrodipicolinate succinylase YP_003012585.1 KEGG: bha:BH2542 hypothetical protein; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003012586.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: bar:GBAA4032 lipoprotein signal peptidase YP_003012587.1 TIGRFAM: sporulation protein, yteA family; KEGG: bsu:BSU30840 hypothetical protein YP_003012589.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin) YP_003012590.1 PFAM: DivIVA family protein; KEGG: bha:BH2546 cell-division initiation protein (septum placement) YP_003012591.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bha:BH2547 hypothetical protein YP_003012592.1 PFAM: protein of unknown function YGGT; KEGG: bha:BH2548 hypothetical protein YP_003012593.1 PFAM: protein of unknown function DUF552; KEGG: bsu:BSU15390 hypothetical protein YP_003012594.1 PFAM: alanine racemase domain protein; KEGG: bha:BH2550 hypothetical protein YP_003012595.1 PFAM: protein of unknown function DUF152; KEGG: bha:BH2551 hypothetical protein YP_003012596.1 TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: bar:GBAA4041 hypothetical protein YP_003012597.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin YP_003012598.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation YP_003012599.1 TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: bar:GBAA4044 sporulation sigma-E factor processing peptidase YP_003012601.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: bha:BH2558 cell division protein FtsZ YP_003012602.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: bha:BH2559 cell-division protein (septum formation) YP_003012603.1 PFAM: polypeptide-transport-associated domain protein FtsQ-type; KEGG: bsu:BSU15240 cell-division initiation protein YP_003012604.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: tgr:Tgr7_0742 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003012605.1 KEGG: bsu:BSU15230 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein YP_003012606.1 TIGRFAM: stage V sporulation protein E; cell division protein FtsW; PFAM: cell cycle protein; KEGG: bha:BH2566 stage V sporulation protein E (required for spore cortex synthesis) YP_003012607.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: hypothetical protein YP_003012608.1 TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase family 4; KEGG: bsu:BSU15190 phospho-N-acetylmuramoyl-pentapeptide-transferase YP_003012609.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: bsu:BSU04570 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D -alanine ligase YP_003012610.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: bha:BH2571 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_003012611.1 KEGG: bha:BH2572 stage V sporulation protein (soprulation specific penicillin-binding protein) (spore cortex); TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein YP_003012612.1 KEGG: bha:BH2573 penicillin-binding protein 2B (cell-division septum); PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein YP_003012613.1 TIGRFAM: cell division protein FtsL; KEGG: bsu:BSU15150 cell-division protein YP_003012614.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bar:GBAA4057 S-adenosyl-methyltransferase MraW YP_003012615.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_003012616.1 KEGG: bha:BH1584 hypothetical protein YP_003012617.1 TIGRFAM: arginase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: hypothetical protein YP_003012618.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: bsu:BSU40340 ornithine--oxo-acid transaminase YP_003012619.1 KEGG: aca:ACP_2455 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; acetohydroxy acid isomeroreductase catalytic domain protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; S-adenosyl-L-homocysteine hydrolase YP_003012620.1 KEGG: bar:GBAA4058 hypothetical protein YP_003012621.1 KEGG: bha:BH2578 hypothetical protein YP_003012622.1 KEGG: hch:HCH_01927 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003012623.1 TIGRFAM: transcription factor, RsfA family; KEGG: bha:BH2581 hypothetical protein YP_003012624.1 KEGG: bsu:BSU24780 hypothetical protein YP_003012625.1 PFAM: protein of unknown function DUF185; KEGG: glo:Glov_0383 protein of unknown function DUF185 YP_003012626.1 KEGG: bha:BH3600 cell wall-binding protein YP_003012627.1 PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B0420 ABC sugar transporter periplasmic ligand binding protein YP_003012628.1 PFAM: PhoH family protein; SMART: nucleotide binding protein PINc; KEGG: bha:BH2629 hypothetical protein YP_003012629.1 TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; KEGG: bsu:BSU14800 hypothetical protein YP_003012631.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: hypothetical protein YP_003012632.1 KEGG: bar:GBAA4164 hypothetical protein YP_003012634.1 TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: bar:GBAA4166 GTP-binding protein TypA YP_003012635.1 KEGG: probable high-affinity potassium transporter YP_003012636.1 PFAM: integral membrane protein TerC; KEGG: pne:Pnec_1545 integral membrane protein TerC YP_003012637.1 PFAM: integral membrane protein TerC; KEGG: reh:H16_A2702 membrane protein TerC, possibly involved in tellurium resistance YP_003012638.1 TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: thiamine biosynthesis protein; THUMP domain protein; ExsB family protein; KEGG: bha:BH3203 thiamin biosynthesis YP_003012639.1 PFAM: aminotransferase class V; KEGG: bar:GBAA4900 aminotransferase, class V YP_003012640.1 PFAM: lytic transglycosylase catalytic; KEGG: bsu:BSU11570 hypothetical protein YP_003012641.1 PFAM: nitroreductase; KEGG: bar:GBAA3444 hypothetical protein YP_003012642.1 KEGG: hypothetical protein YP_003012643.1 PFAM: UbiA prenyltransferase; KEGG: sat:SYN_00445 1,4-dihydroxy-2-naphthoate polyprenyltransferase YP_003012644.1 KEGG: bbt:BBta_2855 oligopeptide ABC transporter (permease) YP_003012645.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: baa:BA_1899 ABC transporter YP_003012646.1 PFAM: GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bar:GBAA1373 GntR family transcriptional regulator YP_003012647.1 KEGG: bsu:BSU09090 hypothetical protein YP_003012648.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU09080 hypothetical protein YP_003012649.1 KEGG: cja:CJA_2330 hypothetical protein YP_003012650.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: bha:BH3915 methyl-accepting chemotaxis protein YP_003012651.1 KEGG: bar:GBAA4604 hypothetical protein YP_003012652.1 PFAM: aminotransferase class-III; KEGG: bsu:BSU09260 aminotransferase YP_003012653.1 PFAM: histidine triad (HIT) protein; KEGG: baa:BA_1229 HIT family YP_003012654.1 PFAM: NUDIX hydrolase; KEGG: gme:Gmet_3309 NUDIX hydrolase YP_003012655.1 PFAM: methyltransferase type 12; methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; KEGG: bha:BH2060 hypothetical protein YP_003012656.1 PFAM: FAD linked oxidase; D-arabinono-14-lactone oxidase; KEGG: aca:ACP_1928 sorbitol oxidase YP_003012659.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bar:GBAA2246 DegV family protein YP_003012660.1 PFAM: coagulation factor 5/8 type domain protein; carbohydrate binding family 6; SMART: coagulation factor 5/8 type domain protein; Parallel beta-helix repeat; KEGG: mlo:mll4444 hypothetical protein YP_003012662.1 PFAM: protein of unknown function DUF350; KEGG: bsu:BSU28570 hypothetical protein YP_003012664.1 PFAM: glutathionylspermidine synthase; KEGG: bar:GBAA2932 glutathionylspermidine synthase YP_003012665.1 KEGG: GF12771 gene product from transcript GF12771-RA YP_003012667.1 PFAM: protein of unknown function DUF541; KEGG: bar:GBAA4304 hypothetical protein YP_003012668.1 PFAM: GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bha:BH0651 GntR family transcriptional regulator YP_003012670.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA4444 ABC transporter ATP-binding protein YP_003012671.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rle:RL4243 transmembrane component of ABC transporter YP_003012672.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rle:RL4244 transmembrane component of ABC transporter YP_003012673.1 PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_4916 extracellular solute-binding protein YP_003012674.1 PFAM: Domain of unknown function DUF1835; KEGG: bar:GBAA2625 hypothetical protein YP_003012675.1 KEGG: bsu:BSU40690 hypothetical protein YP_003012676.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_3254 transcriptional activator MltR YP_003012677.1 PFAM: glycosyl hydrolase family 88; KEGG: bsu:BSU30120 hypothetical protein YP_003012678.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: gur:Gura_3872 ABC transporter related YP_003012679.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: gur:Gura_3873 ABC transporter related YP_003012681.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pha:PSHAb0020 hypothetical protein YP_003012682.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce6750 ABC transporter ATP-binding protein YP_003012683.1 PFAM: protein of unknown function DUF990; KEGG: rle:RL2976 transmembrane component of ABC transporter YP_003012684.1 PFAM: protein of unknown function DUF990; KEGG: scl:sce6955 ABC-type uncharacterized transporter,permease YP_003012685.1 KEGG: bsu:BSU09090 hypothetical protein YP_003012686.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU09080 hypothetical protein YP_003012687.1 KEGG: bha:BH3318 hypothetical protein YP_003012688.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mmw:Mmwyl1_3468 hypothetical protein YP_003012689.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: baa:BA_2421 HTH_1, bacterial regulatory helix-turn-helix protein, LysR family YP_003012690.1 PFAM: cupin; KEGG: rle:pRL90188 hypothetical protein YP_003012691.1 PFAM: xylose isomerase; KEGG: dac:Daci_2932 xylose isomerase domain-containing protein YP_003012692.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: rle:pRL120389 GFO/IDH/MocA family oxidoreductase YP_003012693.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: oca:OCAR_4711 DNA-binding protein YP_003012694.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: she:Shewmr4_0088 MerR family transcriptional regulator YP_003012695.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_2444 short-chain dehydrogenase/reductase SDR YP_003012696.1 PFAM: DinB family protein; KEGG: aba:acid345_2760 hypothetical protein YP_003012697.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: sse:Ssed_0852 lipoprotein YP_003012698.1 PFAM: ThiJ/PfpI domain protein; KEGG: spc:Sputcn32_0376 ThiJ/PfpI domain-containing protein YP_003012699.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bsu:BSU35960 ribose ABC transporter (ribose-binding protein) YP_003012700.1 PFAM: inner-membrane translocator; KEGG: bsu:BSU35950 ribose ABC transporter (permease) YP_003012701.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU35940 ribose ABC transporter ATP-binding protein YP_003012702.1 PFAM: RbsD or FucU transport; KEGG: bsu:BSU35930 D-ribose pyranase YP_003012703.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; phosphomethylpyrimidine kinase type-1; KEGG: bsu:BSU35920 ribokinase YP_003012704.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bsu:BSU35910 LacI family transcription regulator YP_003012705.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bar:GBAA4902 LysR family transcriptional regulator YP_003012706.1 TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; KEGG: sil:SPO3194 ribonucleoside-diphosphate reductase YP_003012707.1 PFAM: SNF2-related protein; helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase YP_003012708.1 KEGG: bar:GBAA4451 hypothetical protein YP_003012710.1 KEGG: bsu:BSU24660 hypothetical protein YP_003012711.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: bsu:BSU01530 N-acetylmuramoyl-L-alanine amidase YP_003012712.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: baa:BA_1876 hypothetical protein YP_003012714.1 KEGG: bha:BH0854 hypothetical protein YP_003012715.1 TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bar:GBAA1591 xanthine phosphoribosyltransferase YP_003012716.1 KEGG: hypothetical protein LOC716925 YP_003012717.1 KEGG: bar:GBAA2012 hypothetical protein YP_003012718.1 PFAM: SMC domain protein; KEGG: mxa:MXAN_0148 hypothetical protein YP_003012719.1 PFAM: metallophosphoesterase; KEGG: baa:BA_1573 DNA_repair, DNA repair exonuclease YP_003012720.1 PFAM: glycosyl transferase group 1; KEGG: sun:SUN_0100 glycosyl transferase YP_003012721.1 KEGG: nis:NIS_0636 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003012722.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: pag:PLES_00661 phosphatase YP_003012723.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: bar:GBAA3392 HAD superfamily hydrolase YP_003012724.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bha:BH0283 hypothetical protein YP_003012725.1 PFAM: transcription activator effector binding; KEGG: mxa:MXAN_3089 transcription activator family protein YP_003012726.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE YP_003012727.1 KEGG: bar:GBAA1371 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase domain protein; ribonucleotide reductase large subunit domain protein YP_003012728.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF YP_003012730.1 PFAM: thymidine kinase; KEGG: bha:BH3779 thymidine kinase YP_003012731.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: bar:GBAA4555 hypothetical protein YP_003012732.1 SMART: RNA binding S1 domain protein; KEGG: bar:GBAA1167 hypothetical protein YP_003012733.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: bha:BH1328 hypothetical protein YP_003012734.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bsu:BSU25630 hypothetical protein YP_003012735.1 KEGG: bsu:BSU25640 nicotinic acid mononucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase; PFAM: cytidylyltransferase YP_003012736.1 PFAM: protein of unknown function UPF0044; KEGG: bha:BH1325 hypothetical protein YP_003012737.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; KEGG: bar:GBAA4561 shikimate 5-dehydrogenase YP_003012738.1 PFAM: GTP-binding protein HSR1-related; KEGG: bsu:BSU25670 GTP-binding protein YqeH YP_003012739.1 TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: bar:GBAA4563 hydrolase HAD subfamily IIIA YP_003012740.1 PFAM: transglutaminase; SMART: transglutaminase; KEGG: bar:GBAA2120 membrane-bound protease YP_003012741.1 PFAM: protein of unknown function DUF58; KEGG: bar:GBAA2121 hypothetical protein YP_003012742.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; KEGG: bha:BH0604 methanol dehydrogenase regulatory protein YP_003012743.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF472; protein of unknown function DUF471; KEGG: baa:BA_2009 hypothetical protein YP_003012744.1 TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; KEGG: bha:BH1570 sporulation protein YP_003012745.1 TIGRFAM: stage V sporulation protein AD; PFAM: stage V sporulation AD family protein; KEGG: bha:BH1569 stage V sporulation protein AD YP_003012746.1 TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: bha:BH1568 stage V sporulation protein AC YP_003012747.1 TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; KEGG: bha:BH1570 sporulation protein YP_003012748.1 TIGRFAM: stage V sporulation protein AD; PFAM: stage V sporulation AD family protein; KEGG: baa:BA_0234 hypothetical protein YP_003012749.1 TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: bha:BH1568 stage V sporulation protein AC YP_003012750.1 PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: baa:BA_0237 hypothetical protein YP_003012751.1 PFAM: protein of unknown function DUF1657; KEGG: baa:BA_0231 hypothetical protein YP_003012752.1 KEGG: ara:Arad_4615 hypothetical protein YP_003012753.1 PFAM: glycosyl hydrolase family 88; KEGG: avi:Avi_7344 unsaturated glucuronyl hydrolase YP_003012754.1 KEGG: rlt:Rleg2_5337 heparinase II/III family protein YP_003012755.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003012756.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: hypothetical protein YP_003012757.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003012758.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_7346 ABC transporter membrane spanning protein (sugar) YP_003012759.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ret:RHE_PF00316 sugar ABC transporter permease protein YP_003012762.1 PFAM: cyclase; KEGG: hypothetical protein ; K07130 YP_003012763.1 PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU05170 hypothetical protein YP_003012764.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl01_3561 GCN5-related N-acetyltransferase YP_003012765.1 TIGRFAM: histidinol-phosphate phosphatase; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: dal:Dalk_2876 histidinol-phosphate phosphatase YP_003012767.1 PFAM: hypothetical protein; SMART: Ig domain protein group 2 domain protein; KEGG: sbl:Sbal_4398 Ig domain-containing protein YP_003012768.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rle:RL0523 purine deaminase YP_003012769.1 PFAM: MgtC/SapB transporter; KEGG: bar:GBAA3585 MgtC family protein YP_003012770.1 PFAM: S-layer domain protein; carbohydrate binding family 6; KEGG: hypothetical protein YP_003012771.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5865 multidrug resistance protein YP_003012772.1 KEGG: rle:RL4049 hypothetical protein YP_003012773.1 KEGG: bha:BH4021 hypothetical protein YP_003012774.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003012775.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012776.1 PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll3590 sugar transporter sugar binding protein YP_003012777.1 PFAM: glycoside hydrolase family 43; carbohydrate binding family 6; KEGG: sde:Sde_0791 alpha-L-arabinofuranosidase YP_003012778.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rle:pRL90125 permease transporter component YP_003012779.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: smt:Smal_2682 binding-protein-dependent transport systems inner membrane component YP_003012780.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b21604 sugar uptake ABC transporter periplasmic solute-binding protein precursor YP_003012781.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: nmu:Nmul_A1940 glycoside hydrolase family protein YP_003012782.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH1869 hypothetical protein YP_003012783.1 PFAM: protein of unknown function DUF1680; KEGG: sus:acid_6519 hypothetical protein YP_003012784.1 PFAM: glycoside hydrolase family 43; carbohydrate binding family 6; protein of unknown function DUF1080; SMART: cellulose binding type IV; KEGG: hypothetical protein YP_003012785.1 PFAM: GntR family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: hypothetical protein YP_003012786.1 PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: mes:Meso_0635 glycoside hydrolase, family 25 YP_003012787.1 PFAM: glycoside hydrolase family 5; KEGG: hypothetical protein YP_003012788.1 PFAM: xylose isomerase; KEGG: aba:acid345_1695 sugar phosphate isomerases/epimerases YP_003012789.1 PFAM: oxidoreductase domain; oxidoreductase; KEGG: eli:ELI_13345 lipopolysaccharide biosynthesis protein YP_003012790.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003012791.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003012792.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003012793.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH0793 two-component sensor response regulator YP_003012794.1 PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003012795.1 TIGRFAM: sugar (glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: hiq:CGSHiGG_02745 glucuronide permease YP_003012796.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: mmw:Mmwyl1_2734 beta-galactosidase YP_003012797.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003012798.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA3271 LysR family transcriptional regulator YP_003012799.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: ecy:ECSE_0538 uracil transporter YP_003012800.1 KEGG: hypothetical protein similar to histone acetyltransferase; K06062 histone acetyltransferase YP_003012801.1 KEGG: bar:GBAA3452 hypothetical protein YP_003012802.1 TIGRFAM: acetolactate synthase large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: pca:Pcar_1910 acetolactate synthase large subunit, biosynthetic type YP_003012803.1 KEGG: tbd:Tbd_2287 integral membrane protein YP_003012804.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: sde:Sde_1507 hypothetical protein YP_003012805.1 PFAM: xylose isomerase; KEGG: rec:RHECIAT_CH0002772 hypothetical protein YP_003012806.1 PFAM: proline dehydrogenase; KEGG: bha:BH1939 proline dehydrogenase YP_003012807.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vfm:VFMJ11_1150 AraC family transcriptional regulator YP_003012808.1 PFAM: S-layer domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: Os12g0406100; hypothetical protein YP_003012809.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bha:BH1115 hypothetical protein YP_003012810.1 KEGG: sus:acid_6872 hypothetical protein YP_003012811.1 PFAM: polysaccharide deacetylase; KEGG: sat:SYN_01034 polysaccharide deacetylase YP_003012812.1 KEGG: bsu:BSU07030 hypothetical protein YP_003012813.1 KEGG: bsu:BSU07090 hypothetical protein YP_003012814.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU07010 hypothetical protein YP_003012815.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU07100 lipoprotein YP_003012816.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003012817.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_003012818.1 KEGG: bsu:BSU07080 hypothetical protein YP_003012819.1 PFAM: protein of unknown function DUF291; S-layer domain protein; KEGG: sus:acid_1472 glycoside hydrolase, clan GH-D YP_003012820.1 KEGG: bha:BH1878 hypothetical protein YP_003012821.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003012822.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003012823.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3560 AlgQ1, multiple sugar transporter substrate-binding protein YP_003012825.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU30150 hypothetical protein YP_003012826.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH1936 spore germination protein KB YP_003012827.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU07780 hypothetical protein YP_003012828.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU07790 hypothetical protein YP_003012829.1 PFAM: regulatory protein TetR; KEGG: bha:BH3733 TetR/AcrR family transcriptional regulator YP_003012830.1 KEGG: mmr:Mmar10_0744 hypothetical protein YP_003012831.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU09010 hypothetical protein YP_003012832.1 KEGG: bar:GBAA4814 TetR family transcriptional regulator YP_003012833.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: vsa:VSAL_I1983 HTH-type transcriptional repressor PurR (purine nucleotide synthesis repressor) YP_003012834.1 PFAM: glycoside hydrolase family 35; KEGG: hypothetical protein YP_003012835.1 KEGG: scl:sce0966 hypothetical protein YP_003012836.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: GPI anchored protein YP_003012838.1 KEGG: bha:BH2929 hypothetical protein YP_003012839.1 KEGG: bha:BH2930 hypothetical protein YP_003012840.1 PFAM: VanZ family protein; KEGG: baa:BA_0084 hypothetical protein YP_003012841.1 KEGG: bha:BH0796 hypothetical protein YP_003012842.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012843.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003012844.1 KEGG: hypothetical protein YP_003012845.1 KEGG: atu:Atu3024 ABC transporter membrane spanning protein (sugar) YP_003012846.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1912 transmembrane lipoprotein YP_003012847.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1065 hypothetical protein YP_003012848.1 PFAM: glycosyl hydrolase family 88; KEGG: bha:BH2054 unsaturated glucuronyl hydrolase YP_003012850.1 SMART: Parallel beta-helix repeat; KEGG: hypothetical protein YP_003012855.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003012856.1 KEGG: hypothetical protein YP_003012857.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: xcb:XC_2544 general stress protein YP_003012859.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: vsp:VS_2724 hypothetical protein YP_003012860.1 TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; KEGG: gbm:Gbem_1525 tRNA 2-selenouridine synthase YP_003012861.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: ppd:Ppro_1707 selenide, water dikinase YP_003012862.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRB0530 acetyltransferase YP_003012863.1 PFAM: sulfatase; KEGG: bam:Bamb_3271 sulfatase YP_003012864.1 PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: sus:acid_0879 sulfatase YP_003012865.1 KEGG: scl:sce4298 ABC-type oligopeptide transporter, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003012866.1 KEGG: hch:HCH_06901 ABC-type dipeptide/oligopeptide/nickel transporter, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003012867.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hch:HCH_06902 ABC-type dipeptide/oligopeptide/nickel transporter, permeases YP_003012868.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hch:HCH_06903 ABC-type dipeptide/oligopeptide/nickel transporter, permeases YP_003012869.1 PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce4302 ABC-type dipeptide transporter, periplasmic component YP_003012870.1 PFAM: helix-turn-helix- domain containing protein AraC type; histidine kinase HAMP region domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU30150 hypothetical protein YP_003012871.1 PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: scl:sce0966 hypothetical protein YP_003012872.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: bha:BH3379 UDP-glucose 4-epimerase YP_003012873.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: pat:Patl_3067 methyltransferase type 11 YP_003012877.1 KEGG: aca:ACP_1356 BNR/Asp-box repeat protein YP_003012878.1 PFAM: glycosyl transferase group 1; KEGG: bha:BH3380 glycosyl transferase (lipopolysaccharide biosynthesis) YP_003012879.1 PFAM: glycosyl transferase group 1; KEGG: bha:BH3380 glycosyl transferase (lipopolysaccharide biosynthesis) YP_003012880.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: baa:BA_1078 NAD dependent epimerase/dehydratase family YP_003012881.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mxa:MXAN_2689 lipopolysaccharide biosynthesis protein YP_003012882.1 PFAM: glycosyl transferase group 1; KEGG: bha:BH3376 lipopolysaccharide biosynthesis YP_003012884.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: bsu:BSU27000 hypothetical protein YP_003012885.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bsu:BSU27010 NADP-dependent alcohol dehydrogenase YP_003012886.1 PFAM: beta-lactamase; KEGG: rfr:Rfer_2189 beta-lactamase YP_003012887.1 KEGG: rle:pRL120114 hypothetical protein YP_003012888.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003012889.1 PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cko:CKO_02450 hypothetical protein YP_003012891.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: beta-galactosidase/beta-glucuronidase; K01195 beta-glucuronidase YP_003012892.1 KEGG: yen:YE2857 hypothetical protein YP_003012893.1 PFAM: hypothetical protein; SMART: Ig domain protein group 2 domain protein; Parallel beta-helix repeat; KEGG: afw:Anae109_1237 hypothetical protein YP_003012894.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30170 hypothetical protein YP_003012895.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1065 hypothetical protein YP_003012896.1 KEGG: bsu:BSU07100 lipoprotein YP_003012897.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU07010 hypothetical protein YP_003012898.1 PFAM: glycosyl hydrolase family 88; KEGG: bsu:BSU07000 hypothetical protein YP_003012899.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: atc:AGR_L_1135 hypothetical protein YP_003012900.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_2719 AraC family transcriptional regulator YP_003012901.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bar:GBAA2447 amino acid transporter LysE YP_003012902.1 PFAM: Nicotianamine synthase; KEGG: Os03g0307300; hypothetical protein YP_003012903.1 PFAM: coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; KEGG: sde:Sde_2927 beta-1,3-glucanase precursor YP_003012904.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: sde:Sde_2927 beta-1,3-glucanase precursor YP_003012905.1 PFAM: xylose isomerase; KEGG: amc:MADE_00428 twin-arginine translocation pathway signal YP_003012906.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU07100 lipoprotein YP_003012907.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003012908.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atu:Atu3022 ABC transporter membrane spanning protein (sugar) YP_003012909.1 PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: jan:Jann_2050 AraC family transcriptional regulator YP_003012910.1 PFAM: protein of unknown function DUF1861; KEGG: hypothetical protein YP_003012911.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sus:acid_0089 GDSL family lipase YP_003012912.1 PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; glycoside hydrolase family 38 central region; KEGG: bha:BH0791 alpha-mannosidase YP_003012913.1 PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; KEGG: dsh:Dshi_3007 alpha-mannosidase YP_003012914.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein YP_003012915.1 PFAM: GntR family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bsu:BSU33970 LacI family transcription regulator YP_003012917.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU17770 hypothetical protein YP_003012918.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU17760 hypothetical protein YP_003012919.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU17750 hypothetical protein YP_003012920.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source YP_003012921.1 PFAM: GntR family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bsu:BSU33970 LacI family transcription regulator YP_003012922.1 PFAM: carbohydrate kinase FGGY; KEGG: msu:MS0059 XylB protein YP_003012923.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: asu:Asuc_0551 cation diffusion facilitator family transporter YP_003012924.1 PFAM: protein of unknown function DUF421; KEGG: bsu:BSU05540 hypothetical protein YP_003012926.1 KEGG: ANKRD26; ankyrin repeat domain 26 YP_003012927.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU06970 hypothetical protein YP_003012928.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1119 lactose transporter (permease) YP_003012929.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sme:SMc04136 transporter permease ABC transporter protein YP_003012930.1 PFAM: Mannonate dehydratase; Xylose isomerase domain protein TIM barrel; KEGG: hypothetical protein YP_003012931.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3842 two-component response regulator YP_003012932.1 PFAM: GntR family transcriptional regulator; GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: dat:HRM2_15630 transcriptional regulator (GntR family protein) YP_003012933.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aba:acid345_3509 short-chain dehydrogenase/reductase SDR YP_003012934.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:acid_2336 short-chain dehydrogenase/reductase SDR YP_003012935.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: mlo:mll2322 hypothetical protein YP_003012936.1 KEGG: sus:acid_3344 demethylmenaquinone methyltransferase-like protein YP_003012937.1 PFAM: aldo/keto reductase; KEGG: scl:sce3333 aldo/keto reductase family oxidoreductase YP_003012938.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rfr:Rfer_1101 binding-protein-dependent transport systems inner membrane component YP_003012939.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hch:HCH_06909 ABC-type sugar transporter, permeases YP_003012940.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003012941.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003012942.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003012943.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: bar:GBAA3614 RarD protein YP_003012944.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: baa:BA_2297 response_reg, response regulator receiver domain YP_003012945.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: baa:BA_2298 hypothetical protein YP_003012946.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: baa:BA_2299 ABC transporter YP_003012947.1 PFAM: ABC transporter; KEGG: baa:BA_2300 hypothetical protein predicted by GeneMark YP_003012948.1 PFAM: ABC transporter; KEGG: bar:GBAA1795 hypothetical protein YP_003012949.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA2531 ABC transporter ATP-binding protein YP_003012950.1 PFAM: DoxX family protein; KEGG: bar:GBAA3219 hypothetical protein YP_003012951.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bar:GBAA3220 MarR family transcriptional regulator YP_003012952.1 KEGG: xca:xccb100_1006 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding YP_003012953.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_003012954.1 PFAM: copper amine oxidase domain protein; KEGG: bha:BH1017 hypothetical protein YP_003012955.1 KEGG: hypothetical protein YP_003012956.1 KEGG: bha:BH2120 alkaline xylanase A (1,4-beta-D-xylan xylanohydrolase); PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10 YP_003012957.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: scl:sce3059 sugar ABC transporter permease YP_003012958.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hypothetical protein YP_003012960.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: scl:sce3059 sugar ABC transporter permease YP_003012961.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2403 binding-protein-dependent transport system, inner membrane component YP_003012962.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003012963.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003012964.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH3679 two-component response regulator YP_003012965.1 KEGG: sus:acid_4394 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; carbohydrate-binding CenC domain protein; carbohydrate-binding family 9; SMART: glycoside hydrolase family 10 YP_003012966.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hypothetical protein YP_003012967.1 PFAM: protein of unknown function DUF214; KEGG: hypothetical protein YP_003012968.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: cff:CFF8240_0758 macrolide-specific efflux protein MacA YP_003012969.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: glo:Glov_3629 ABC transporter YP_003012970.1 KEGG: scl:sce6693 O-glycosyl hydrolase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10 YP_003012971.1 PFAM: glycoside hydrolase family 43; KEGG: sus:acid_2993 glycoside hydrolase family protein YP_003012972.1 KEGG: hypothetical protein YP_003012973.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bav:BAV1234 ABC transporter permease and ATP-binding protein YP_003012974.1 PFAM: glycoside hydrolase clan GH-D; KEGG: alpha-galactosidase; K07407 alpha-galactosidase YP_003012976.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2229 AraC/XylS family transcriptional regulator YP_003012977.1 PFAM: carbohydrate binding family 6; glycoside hydrolase family 43; SMART: cellulose binding type IV; KEGG: bsu:BSU18160 endo-1,4-beta-xylanase (xylanase D) YP_003012978.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003012979.1 PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: hypothetical protein YP_003012980.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1064 hypothetical protein YP_003012981.1 PFAM: ricin B lectin; glycoside hydrolase family 5; SMART: ricin B lectin; KEGG: scl:sce4592 alpha-L-arabinofuranosidase precursor YP_003012982.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003012983.1 PFAM: carboxylesterase type B; KEGG: sus:acid_3048 carboxylesterase, type B YP_003012984.1 KEGG: hypothetical protein YP_003012985.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bar:GBAA4736 DNA-binding response regulator YP_003012986.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH2110 hypothetical protein YP_003012987.1 PFAM: protein of unknown function DUF1680; KEGG: aca:ACP_1269 Tat pathway signal sequence domain protein YP_003012988.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003012989.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1912 transmembrane lipoprotein YP_003012990.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1911 transmembrane lipoprotein YP_003012991.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003012992.1 PFAM: protein of unknown function DUF1680; KEGG: bha:BH1877 hypothetical protein YP_003012993.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003012994.1 KEGG: cak:Caul_2405 hypothetical protein YP_003012995.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3682 sugar ABC transporter (permease) YP_003012996.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3681 sugar ABC transporter (permease) YP_003012997.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_0944 extracellular solute-binding protein YP_003012998.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003012999.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003013000.1 KEGG: sus:acid_2103 esterase YP_003013001.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdj:Gdia_0498 short-chain dehydrogenase/reductase SDR YP_003013002.1 PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: aba:acid345_0902 alpha-L-fucosidase YP_003013003.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vvy:VV1590 AraC-type DNA-binding domain-containing protein YP_003013004.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmj:BMULJ_05875 short-chain alcohol dehydrogenase of unknown specificity YP_003013005.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; KEGG: bha:BH1285 sporulation sigma factor SigK YP_003013006.1 KEGG: eba:ebA6578 hypothetical protein YP_003013007.1 KEGG: ade:Adeh_3861 hypothetical protein YP_003013009.1 KEGG: rso:RS03692 hypothetical protein YP_003013014.1 KEGG: bch:Bcen2424_0207 hypothetical protein YP_003013015.1 KEGG: cak:Caul_3807 hypothetical protein YP_003013016.1 sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment YP_003013017.1 PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein YP_003013019.1 TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: mlo:mlr2501 manganese transporter MntH YP_003013020.1 PFAM: cell wall hydrolase SleB; peptidoglycan-binding domain 1 protein; KEGG: bar:GBAA2748 spore cortex-lytic enzyme prepeptide YP_003013021.1 KEGG: bha:BH2241 7-cyano-7-deazaguanine reductase; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I YP_003013022.1 TIGRFAM: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; PFAM: radical SAM protein; KEGG: baa:BA_1885 hypothetical protein YP_003013023.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bsu:BSU13730 hypothetical protein YP_003013024.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: baa:BA_1883 thiamine biosynthesis protein (ThiI) YP_003013025.1 PFAM: oxidoreductase molybdopterin binding; KEGG: pfo:Pfl01_2341 oxidoreductase, molybdopterin binding YP_003013027.1 PFAM: cellulosome anchoring protein cohesin region; S-layer domain protein; KEGG: S-layer homology domain containing protein YP_003013028.1 KEGG: cja:CJA_0589 Ig domain family YP_003013029.1 KEGG: bac:BamMC406_1697 hypothetical protein YP_003013030.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bar:GBAA4303 MarR family transcriptional regulator YP_003013031.1 PFAM: urease accessory protein UreD; KEGG: hhe:HH0413 urease accessory protein UreH YP_003013032.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bha:BH0257 urease accessory protein YP_003013033.1 PFAM: urease accessory protein UreF; KEGG: apa:APP7_1675 urease accessory protein UreF YP_003013034.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_003013035.1 KEGG: bha:BH0253 urease subunit beta; TIGRFAM: urease, subunit beta; PFAM: urease subunit beta YP_003013036.1 KEGG: abo:ABO_2721 urease subunit gamma; TIGRFAM: urease subunit gamma; PFAM: urease subunit gamma region YP_003013037.1 PFAM: inner-membrane translocator; KEGG: pmu:PM1040 beta-methylgalactoside transporter inner membrane component YP_003013038.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ypg:YpAngola_A3018 galactose/methyl galaxtoside transporter ATP-binding protein YP_003013039.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vco:VC0395_A0942 D-galactose/D-glucose ABC transporter periplasmic D-galactose/D-glucose-binding protein YP_003013040.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: smd:Smed_3227 periplasmic binding protein/LacI transcriptional regulator YP_003013041.1 PFAM: histidine kinase internal region; Cache domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003013042.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003013043.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_003013044.1 PFAM: polysaccharide deacetylase; KEGG: bha:BH1917 chitooligosaccharide deacetylase YP_003013045.1 KEGG: bar:GBAA4841 hypothetical protein YP_003013046.1 PFAM: penicillin-binding protein transpeptidase; KEGG: bsu:BSU27310 hypothetical protein YP_003013047.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bsu:BSU13950 methyl-accepting chemotaxis protein YP_003013048.1 PFAM: aminodeoxychorismate lyase; KEGG: hypothetical protein YP_003013051.1 PFAM: protein of unknown function DUF1292; KEGG: bha:BH1270 hypothetical protein YP_003013052.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: bar:GBAA4614 Holliday junction resolvase-like protein YP_003013053.1 PFAM: protein of unknown function DUF965; KEGG: bha:BH1268 hypothetical protein YP_003013054.1 KEGG: bsu:BSU27410 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase class IIc; phosphoesterase DHHA1; threonyl/alanyl tRNA synthetase SAD YP_003013056.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: baa:BA_1868 bacterial regulatory proteins, DeoR family YP_003013057.1 TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V; KEGG: vvy:VVA0476 2-aminoethylphosphonate--pyruvate transaminase YP_003013058.1 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate YP_003013059.1 TIGRFAM: 2-aminoethylphosphonate ABC transporter, permease; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA1339 iron compound ABC transporter permease protein YP_003013060.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: vsa:VSAL_II0810 ABC transporter ATP-binding protein YP_003013061.1 TIGRFAM: 2-aminoethylphosphonate ABC transporter, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: sfu:Sfum_2899 extracellular solute-binding protein, family 1 YP_003013062.1 KEGG: bha:BH1265 hypothetical protein YP_003013063.1 KEGG: bha:BH1264 hypothetical protein YP_003013064.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bha:BH1260 Fe-S cluster formation protein YP_003013065.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bha:BH1259 hypothetical protein YP_003013066.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: bha:BH1261 (5-methylaminomethyl-2-thiouridylate)-methyltran sferase YP_003013067.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: hypothetical protein YP_003013068.1 PFAM: copper resistance protein CopC; KEGG: hypothetical protein YP_003013069.1 KEGG: bha:BH2290 hypothetical protein YP_003013070.1 PFAM: ROK family protein; KEGG: msu:MS1413 NagC protein YP_003013071.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: csa:Csal_0359 alcohol dehydrogenase GroES-like protein YP_003013072.1 PFAM: periplasmic binding protein; KEGG: bar:GBAA0615 iron compound ABC transporter iron compound-binding protein YP_003013073.1 PFAM: transporter permease; KEGG: bha:BH3790 iron (III) dicitrate transporter (permease) YP_003013074.1 PFAM: transporter permease; KEGG: bha:BH3789 iron (III) dicitrate transporter (permease) YP_003013075.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU32940 hypothetical protein YP_003013076.1 KEGG: esa:ESA_00316 hypothetical protein YP_003013077.1 PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: pca:Pcar_1103 fused recombination factor protein RarA/unknown domain-containing protein YP_003013079.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: bha:BH1509 methyl-accepting chemotaxis protein YP_003013080.1 KEGG: dar:Daro_1052 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; type IV pilus assembly PilZ; GGDEF domain containing protein; hypothetical protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003013081.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bar:GBAA4630 HesA/MoeB/ThiF family protein YP_003013082.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bha:BH1252 aspartyl-tRNA synthetase YP_003013083.1 KEGG: bar:GBAA4633 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein YP_003013085.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: bha:BH1243 D-tyrosyl-tRNA(Tyr) deacylase YP_003013086.1 KEGG: bha:BH1242 GTP pyrophosphokinase (stringent response); TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003013087.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: hypothetical protein YP_003013088.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH3679 two-component response regulator YP_003013089.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003013090.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2113 ABC transporter (permease) YP_003013091.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1911 transmembrane lipoprotein YP_003013092.1 KEGG: bha:BH1241 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003013093.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bha:BH1240 single-strand DNA-specific exonuclease YP_003013094.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bha:BH0712 cation efflux system YP_003013095.1 TIGRFAM: protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: bha:BH1237 preprotein translocase subunit SecF YP_003013096.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_003013097.1 KEGG: bsu:BSU27660 hypothetical protein YP_003013098.1 TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: bha:BH1233 involved in spore cortex synthesis YP_003013099.1 PFAM: protein of unknown function DUF421; KEGG: hypothetical protein YP_003013100.1 PFAM: citrate transporter; Arsenical pump membrane protein; KEGG: bar:GBAA3526 arsenical pump family protein YP_003013101.1 KEGG: bar:GBAA4645 hypothetical protein YP_003013102.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: bha:BH1229 hypothetical protein YP_003013103.1 KEGG: bar:GBAA4647 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: queuine/other tRNA-ribosyltransferase YP_003013104.1 TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: bha:BH1227 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_003013105.1 TIGRFAM: SpoIID/LytB domain protein; PFAM: stage II sporulation D domain protein; KEGG: glo:Glov_2013 SpoIID/LytB domain protein YP_003013106.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: mxa:MXAN_4998 hypothetical protein YP_003013107.1 KEGG: bar:GBAA4650 Holliday junction DNA helicase B; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: ATPase AAA central domain protein; Holliday junction DNA helicase RuvB domain; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003013108.1 KEGG: bsu:BSU27740 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003013109.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_003013110.1 KEGG: bha:BH1223 forespore regulator of the sigma-K checkpoint YP_003013111.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: eln1; tropoelastin 1 YP_003013112.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: bha:BH1215 prephenate dehydratase YP_003013113.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate YP_003013114.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: bsu:BSU32260 homoserine dehydrogenase YP_003013115.1 PFAM: amino acid-binding ACT domain protein; KEGG: bha:BH1214 hypothetical protein YP_003013116.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; KEGG: bsu:BSU27920 GTPase ObgE YP_003013117.1 KEGG: bsu:BSU27930 sporulation initiation phosphotransferase YP_003013118.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: bar:GBAA4674 50S ribosomal protein L27 YP_003013119.1 PFAM: protein of unknown function DUF464; KEGG: bha:BH3010 hypothetical protein YP_003013120.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: bar:GBAA4676 50S ribosomal protein L21 YP_003013121.1 KEGG: glo:Glov_0469 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein YP_003013122.1 PFAM: peptidase M50; KEGG: bha:BH3015 protease (processing of pro-sigma-K to active sigma-K) YP_003013123.1 PFAM: peptidase M23; KEGG: bha:BH3016 inhibitor of SpoIVFB YP_003013124.1 PFAM: cell cycle protein; KEGG: bha:BH3275 stage V sporulation protein E YP_003013125.1 TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase; KEGG: bha:BH3027 septum site-determining protein YP_003013126.1 TIGRFAM: septum site-determining protein MinC; PFAM: septum formation inhibitor MinC; KEGG: bar:GBAA4681 septum formation inhibitor YP_003013127.1 TIGRFAM: rod shape-determining protein MreD; KEGG: bha:BH3029 cell-shape determining protein YP_003013128.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: bha:BH3030 rod shape-determining protein MreC YP_003013129.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; KEGG: bha:BH3031 rod shape-determining protein MreB YP_003013130.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: bar:GBAA4685 DNA repair protein RadC YP_003013131.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: bsu:BSU28050 Maf-like protein YP_003013133.1 KEGG: GF18241 gene product from transcript GF18241-RA YP_003013134.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: gur:Gura_3973 UDP-N-acetylmuramate--L-alanine ligase YP_003013135.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: bar:GBAA4689 folylpolyglutamate synthase YP_003013136.1 TIGRFAM: valyl-tRNA synthetase; KEGG: bha:BH3038 valyl-tRNA synthetase YP_003013137.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU09010 hypothetical protein YP_003013138.1 PFAM: regulatory protein TetR; KEGG: dvl:Dvul_0665 TetR family transcriptional regulator YP_003013139.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: bsu:BSU28110 required for assembly of the spore coat (stage VI sporulation) YP_003013140.1 TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; KEGG: bsu:BSU09210 hypothetical protein YP_003013141.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: bar:GBAA4693 glutamate-1-semialdehyde aminotransferase YP_003013142.1 PFAM: delta-aminolevulinic acid dehydratase; KEGG: bar:GBAA4694 delta-aminolevulinic acid dehydratase YP_003013143.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrinogen III synthase HEM4; KEGG: hypothetical protein YP_003013144.1 KEGG: bha:BH3046 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase YP_003013145.1 TIGRFAM: siroheme synthase; KEGG: sfu:Sfum_1588 siroheme synthase YP_003013146.1 PFAM: cytochrome C assembly protein; KEGG: bha:BH3047 negative effector of the concentration of HemA YP_003013147.1 KEGG: bha:BH3048 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like YP_003013148.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_003013151.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_003013152.1 KEGG: bha:BH3050 ATP-dependent proteinase La 1 (lon) (class III heat-shock protein); TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; ATPase AAA YP_003013153.1 KEGG: bha:BH3051 ATP-dependent proteinase La; TIGRFAM: ATP-dependent protease LonB; PFAM: peptidase S16; AAA ATPase central domain protein; magnesium chelatase ChlI subunit; SMART: AAA ATPase YP_003013154.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_003013155.1 KEGG: bha:BH3052 ATP-dependent protease ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpX; PFAM: ATPase AAA; zinc finger C4 domain protein; AAA ATPase central domain protein; SMART: ATPase AAA YP_003013156.1 KEGG: bha:BH3564 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003013157.1 TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type; KEGG: bha:BH3053 trigger factor YP_003013159.1 PFAM: helix-turn-helix HxlR type; KEGG: bar:GBAA3379 hypothetical protein YP_003013160.1 PFAM: nitroreductase; KEGG: bsu:BSU07830 hypothetical protein YP_003013161.1 KEGG: mmw:Mmwyl1_0210 hypothetical protein YP_003013162.1 KEGG: bar:GBAA5044 hypothetical protein YP_003013163.1 KEGG: bha:BH1508 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferaseI YP_003013164.1 PFAM: Ham1 family protein; KEGG: gsu:GSU1794 HAM1 protein YP_003013165.1 KEGG: bsu:BSU28370 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003013166.1 KEGG: bsu:BSU28380 germination (cortex hydrolysis) and sporulation (stage II, multiple polar septa) YP_003013167.1 PFAM: phosphatidylglycerophosphatase A; KEGG: baa:BA_0061 protein of unknown function DUF64 YP_003013168.1 KEGG: bha:BH1489 adenylylsulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_003013169.1 KEGG: bha:BH3371 hypothetical protein YP_003013170.1 PFAM: beta-lactamase; KEGG: bpt:Bpet0064 metallo-beta-lactamase family protein YP_003013171.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_003013172.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: bsu:BSU35020 N-acetylglucosamine-6-phosphate isomerase YP_003013173.1 KEGG: hypothetical protein; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; amidohydrolase YP_003013174.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: aba:acid345_3908 DeoR family transcriptional regulator YP_003013175.1 PFAM: PfkB domain protein; KEGG: bha:BH3724 2-keto-3-deoxygluconate kinase YP_003013177.1 KEGG: bar:GBAA2818 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase; helicase domain protein; HRDC domain protein; SMART: helicase; HRDC domain protein; DEAD-like helicase YP_003013178.1 KEGG: bha:BH3158 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase YP_003013179.1 KEGG: bsu:BSU29130 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003013180.1 KEGG: bha:BH3160 citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: citrate synthase YP_003013181.1 PFAM: Ppx/GppA phosphatase; KEGG: bha:BH1393 exopolyphosphatase YP_003013182.1 PFAM: polyphosphate kinase; KEGG: bha:BH1392 polyphosphate kinase YP_003013183.1 PFAM: thioesterase superfamily protein; KEGG: aba:acid345_1409 4-hydroxybenzoyl-CoA thioesterase YP_003013184.1 TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; PEP-utilising protein mobile region; pyruvate kinase alpha/beta; KEGG: bha:BH3163 pyruvate kinase YP_003013185.1 KEGG: bha:BH3165 acetyl-CoA carboxylase carboxyltransferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; PFAM: acetyl-CoA carboxylase subunit alpha YP_003013186.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; KEGG: bha:BH3166 acetyl-CoA carboxylase subunit beta YP_003013188.1 PFAM: phosphatidylglycerophosphatase A; KEGG: baa:BA_0061 protein of unknown function DUF64 YP_003013189.1 KEGG: gsu:GSU1401 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein YP_003013190.1 KEGG: bha:BH3170 hypothetical protein YP_003013192.1 KEGG: bar:GBAA4854 hypothetical protein YP_003013193.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: bar:GBAA2008 ribosome-associated GTPase YP_003013194.1 PFAM: DRTGG domain protein; CBS domain containing protein; GntR family transcriptional regulator; SMART: CBS domain containing protein; KEGG: bha:BH3175 hypothetical protein YP_003013196.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: vpa:VPA1391 hypothetical protein YP_003013197.1 KEGG: bha:BH3176 hypothetical protein YP_003013198.1 KEGG: hypothetical protein YP_003013199.1 KEGG: hypothetical protein YP_003013200.1 KEGG: bsu:BSU09770 hypothetical protein YP_003013201.1 KEGG: hypothetical protein YP_003013202.1 PFAM: GCN5-related N-acetyltransferase YP_003013203.1 KEGG: baa:BA_1469 SLH, S-layer homology domain YP_003013204.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA4920 DNA-binding response regulator YP_003013205.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA4921 sensor histidine kinase YP_003013206.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bha:BH0430 hypothetical protein YP_003013207.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: aeh:Mlg_0734 response regulator receiver protein YP_003013208.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA2785 glycine betaine/L-proline ABC transporter permease YP_003013209.1 KEGG: bsu:BSU02980 glycine betaine ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; CBS domain containing protein; SMART: ATPase AAA; CBS domain containing protein YP_003013210.1 KEGG: bsu:BSU31070 hypothetical protein YP_003013211.1 PFAM: helix-turn-helix- domain containing protein AraC type; periplasmic binding protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003013212.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU33320 ferrichrome ABC transporter (ferrichrome-binding protein) YP_003013213.1 KEGG: pin:Ping_1731 galactoside O-acetyltransferase YP_003013214.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: vch:VC1631 hypothetical protein YP_003013215.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU05150 hypothetical protein YP_003013216.1 TIGRFAM: conserved hypothetical protein; KEGG: baa:BA_1386 hypothetical protein YP_003013217.1 KEGG: bha:BH2027 hypothetical protein YP_003013218.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bha:BH2026 RNA polymerase ECF-type sigma factor YP_003013219.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU40670 hypothetical protein YP_003013220.1 PFAM: GerA spore germination protein; KEGG: bar:GBAA3633 spore germination protein YP_003013221.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bar:GBAA3634 spore germination protein YP_003013222.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bar:GBAA3635 spore germination protein YP_003013223.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bsu:BSU06320 hypothetical protein YP_003013224.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_CH0003733 UDP-glucose 4-epimerase protein YP_003013225.1 PFAM: aldo/keto reductase; KEGG: ret:RHE_PB00074 aldoketo reductase protein YP_003013226.1 PFAM: helix-turn-helix HxlR type; KEGG: wsu:WS1168 hypothetical protein YP_003013227.1 PFAM: protein of unknown function DUF1349; KEGG: scl:sce3974 hypothetical protein YP_003013228.1 PFAM: beta-lactamase; KEGG: pat:Patl_3606 beta-lactamase YP_003013230.1 KEGG: son:SO_1733 hypothetical protein YP_003013232.1 PFAM: protein of unknown function DUF347; KEGG: afr:AFE_2330 hypothetical protein YP_003013233.1 PFAM: protein of unknown function DUF347; KEGG: mlo:mlr4456 integral membrane protein YP_003013234.1 PFAM: phosphoesterase; KEGG: mlo:mlr4110 acid phosphatase YP_003013235.1 KEGG: similar to NAALADase II protein YP_003013236.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bha:BH2865 hemolysin III YP_003013238.1 KEGG: bar:GBAA2065 hypothetical protein YP_003013239.1 PFAM: conserved hypothetical protein; KEGG: bha:BH3976 hypothetical protein YP_003013240.1 PFAM: conserved hypothetical protein; KEGG: bha:BH3977 hypothetical protein YP_003013241.1 PFAM: transcriptional regulator PadR family protein; KEGG: bar:GBAA3495 hypothetical protein YP_003013243.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU40670 hypothetical protein YP_003013244.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU40660 hypothetical protein YP_003013245.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bha:BH3858 MerR family transcriptional regulator YP_003013246.1 PFAM: nitroreductase; KEGG: bha:BH3859 NADH dehydrogenase YP_003013247.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA0272 sensor histidine kinase YP_003013248.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA0271 DNA-binding response regulator YP_003013249.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bar:GBAA5083 ribosomal RNA adenine dimethylase domain-containing protein YP_003013251.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dat:HRM2_14860 MarR family protein YP_003013252.1 PFAM: amidohydrolase; amidohydrolase; KEGG: sus:acid_6576 amidohydrolase YP_003013253.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: baa:BA_2314 glyoxalase/bleomycin resistance protein/dioxygenase superfamily YP_003013255.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: abc:ACICU_01927 dihydrofolate reductase YP_003013256.1 KEGG: scl:sce3088 hypothetical protein YP_003013257.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cbd:CBUD_1372 multidrug resistance protein B YP_003013258.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gur:Gura_2445 regulatory protein, ArsR YP_003013259.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2019 acetyltransferase YP_003013262.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: vha:VIBHAR_02650 hypothetical protein YP_003013263.1 KEGG: pin:Ping_1731 galactoside O-acetyltransferase YP_003013264.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2229 AraC/XylS family transcriptional regulator YP_003013265.1 TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: bar:GBAA4306 magnesium/cobalt transporter CorA YP_003013266.1 PFAM: phosphoglycerate mutase; KEGG: hch:HCH_03079 fructose-2,6-bisphosphatase YP_003013268.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_3922 glyoxalase/bleomycin resistance protein/dioxygenase YP_003013269.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: aha:AHA_2358 hypothetical protein YP_003013270.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_003013272.1 KEGG: bsu:BSU06610 ATP-dependent DNA helicase YP_003013273.1 KEGG: hypothetical protein YP_003013274.1 KEGG: dal:Dalk_4241 hypothetical protein YP_003013275.1 KEGG: dol:Dole_1383 hypothetical protein YP_003013277.1 KEGG: baa:BA_2256 hypothetical protein YP_003013278.1 KEGG: hch:HCH_02262 hypothetical protein YP_003013281.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: baa:BA_0355 thioester dehydrase YP_003013284.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bsu:BSU05120 cold-shock protein YP_003013285.1 PFAM: nitroreductase; KEGG: bsu:BSU07830 hypothetical protein YP_003013286.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpe:BP2133 transmembrane efflux protein YP_003013287.1 PFAM: DSBA oxidoreductase; KEGG: gdj:Gdia_0941 DsbA oxidoreductase YP_003013288.1 PFAM: oxidoreductase; KEGG: bxe:Bxe_C0470 oxidoreductase YP_003013289.1 PFAM: regulatory protein TetR; KEGG: lhk:LHK_02927 TetR family transcriptional regulator YP_003013290.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bha:BH4041 hypothetical protein YP_003013292.1 KEGG: smt:Smal_1168 barnase inhibitor YP_003013293.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: swi:Swit_1189 activator of HSP90 ATPase 1 family protein YP_003013296.1 KEGG: dal:Dalk_4241 hypothetical protein YP_003013297.1 KEGG: dol:Dole_1383 hypothetical protein YP_003013301.1 PFAM: VanZ family protein; KEGG: baa:BA_0084 hypothetical protein YP_003013302.1 PFAM: S-layer domain protein; Ig domain protein group 2 domain protein; SMART: hypothetical protein; KEGG: sbl:Sbal_4398 Ig domain-containing protein YP_003013304.1 PFAM: manganese containing catalase; KEGG: bsu:BSU06910 polypeptide composition of the spore coat YP_003013305.1 KEGG: baa:BA_1390 CotJB protein YP_003013306.1 KEGG: baa:BA_1391 CotJA protein YP_003013307.1 PFAM: 17 kDa surface antigen; KEGG: abn:AB57_1255 hypothetical protein YP_003013308.1 TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: bha:BH0463 hypothetical protein YP_003013309.1 PFAM: radical SAM protein; KEGG: bha:BH0889 hypothetical protein YP_003013310.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sse:Ssed_1799 metal dependent phosphohydrolase domain-containing protein YP_003013311.1 PFAM: metallophosphoesterase; 5'-nucleotidase; KEGG: bsu:BSU32370 hypothetical protein YP_003013312.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z YP_003013313.1 PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; KEGG: bsu:BSU14300 molybdopterin converting factor (subunit 2) YP_003013314.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bha:BH0008 hypothetical protein YP_003013315.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: bha:BH3467 hypothetical protein YP_003013316.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: bha:BH3468 nitrogen fixation protein YP_003013317.1 TIGRFAM: cysteine desulfurase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bsu:BSU32690 cysteine desulfurase YP_003013318.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: bha:BH3470 hypothetical protein YP_003013319.1 KEGG: bsu:BSU32710 hypothetical protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: ATPase AAA YP_003013320.1 PFAM: protein of unknown function DUF1802; KEGG: predicted protein YP_003013321.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway YP_003013322.1 KEGG: baa:BA_0918 methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_003013323.1 PFAM: Domain of unknown function DUF1805; KEGG: baa:BA_0081 hypothetical protein YP_003013325.1 KEGG: gsu:GSU0946 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003013326.1 PFAM: protein of unknown function DUF423; KEGG: afw:Anae109_0402 hypothetical protein YP_003013327.1 KEGG: slo:Shew_0295 hypothetical protein YP_003013328.1 KEGG: GOLGB1; golgin B1, golgi integral membrane protein YP_003013329.1 KEGG: bar:GBAA2360 exonuclease YP_003013330.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: bar:GBAA2359 exonuclease SbcD YP_003013331.1 PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd0731 hypothetical protein YP_003013332.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bar:GBAA5302 hypothetical protein YP_003013333.1 PFAM: protein of unknown function UPF0074; KEGG: bar:GBAA4743 rrf2 family protein YP_003013334.1 PFAM: beta-lactamase; KEGG: bar:GBAA2405 hydrolase YP_003013337.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; iron dependent repressor; SMART: regulatory protein DeoR; KEGG: bha:BH2168 DeoR family transcriptional regulator YP_003013338.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rle:RL3779 short chain dehydrogenase YP_003013339.1 PFAM: AraC-type transcriptional regulator; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pag:PLES_32751 transcriptional regulator YP_003013340.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bba:Bd3635 hypothetical protein YP_003013341.1 PFAM: regulatory protein TetR; KEGG: bha:BH1965 TetR/AcrR family transcriptional regulator YP_003013342.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003013343.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003013344.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003013345.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003013346.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH0792 two-component sensor histidine kinase YP_003013347.1 KEGG: hypothetical protein YP_003013349.1 PFAM: glycoside hydrolase family 38; glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: ecr:ECIAI1_1941 alpha-mannosidase YP_003013350.1 PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll4149 sugar ABC transporter (sugar-binding protein) YP_003013351.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: oan:Oant_2483 binding-protein-dependent transport systems inner membrane component YP_003013352.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ret:RHE_PF00316 sugar ABC transporter permease protein YP_003013353.1 PFAM: GntR family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: hypothetical protein YP_003013354.1 PFAM: Domain of unknown function DUF1793; KEGG: sus:acid_2314 glutaminase YP_003013355.1 PFAM: macrocin-O-methyltransferase; KEGG: baa:BA_1757 bacteriocin O-metyltransferase YP_003013357.1 PFAM: ADP-ribosylation/crystallin J1; KEGG: rsq:Rsph17025_3202 hypothetical protein YP_003013358.1 TIGRFAM: cytidyltransferase; PFAM: cytidylyltransferase; KEGG: hch:HCH_06994 ATPase/kinase involved in NAD metabolism YP_003013359.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: hch:HCH_06995 nicotinamide mononucleotide transporter YP_003013360.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_7192 NUDIX family hydrolase YP_003013361.1 KEGG: pna:Pnap_1211 DNA helicase YP_003013362.1 PFAM: protein of unknown function DUF45; KEGG: bar:GBAA0337 hypothetical protein YP_003013363.1 PFAM: protein of unknown function DUF323; KEGG: bha:BH0900 transcriptional regulator (enhancement of xylanase A production) YP_003013364.1 PFAM: glycoside hydrolase family 11; KEGG: bsu:BSU18840 endo-1,4-beta-xylanase YP_003013365.1 PFAM: S-layer domain protein; sugar-binding domain protein; KEGG: GALC; galactosylceramidase; K01202 galactosylceramidase YP_003013366.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: hch:HCH_10021 DNA G:T-mismatch repair endonuclease YP_003013367.1 PFAM: protein of unknown function UPF0027; KEGG: bha:BH1789 hypothetical protein YP_003013368.1 PFAM: glycoside hydrolase family 4; KEGG: atc:AGR_L_446 alpha-galactosidase (melibiase) YP_003013369.1 PFAM: cupin; AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_1173 cupin 2 domain-containing protein YP_003013371.1 PFAM: protein of unknown function DUF1232; KEGG: xau:Xaut_0407 hypothetical protein YP_003013372.1 KEGG: bsu:BSU18030 small acid-soluble spore protein Tlp YP_003013373.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bar:GBAA4896 acetyl-CoA synthetase YP_003013375.1 TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: rpe:RPE_4100 death-on-curing family protein YP_003013376.1 KEGG: aca:ACP_1399 alpha-1,2-mannosidase family protein; TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; carbohydrate binding family 6; coagulation factor 5/8 type domain protein; SMART: cellulose binding type IV YP_003013377.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003013378.1 PFAM: PA14 domain protein; metallophosphoesterase; Fibronectin type III domain protein; coagulation factor 5/8 type domain protein; SMART: PA14 domain protein; Fibronectin type III domain protein; KEGG: dat:HRM2_13400 phosphohydrolase YP_003013379.1 KEGG: cff:CFF8240_0878 hypothetical protein YP_003013380.1 PFAM: protein of unknown function DUF402; KEGG: bsu:BSU08680 hypothetical protein YP_003013381.1 KEGG: pla:Plav_0428 hypothetical protein YP_003013382.1 PFAM: metallophosphoesterase; S-layer domain protein; KEGG: bsu:BSU35040 hypothetical protein YP_003013383.1 KEGG: pol:Bpro_1961 hypothetical protein YP_003013384.1 KEGG: bar:GBAA4873 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; NADP oxidoreductase coenzyme F420-dependent; shikimate/quinate 5-dehydrogenase YP_003013385.1 PFAM: purine catabolism PurC domain protein; KEGG: bha:BH1735 hypothetical protein YP_003013387.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position YP_003013388.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines YP_003013389.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain YP_003013390.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sus:acid_7663 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003013391.1 KEGG: bha:BH0761 allantoate amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003013392.1 PFAM: NMT1/THI5 like domain protein; KEGG: smd:Smed_2373 NMT1/THI5-like domain-containing protein YP_003013393.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rru:Rru_A3455 binding-protein dependent transport system inner membrane protein YP_003013394.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sit:TM1040_1495 binding-protein-dependent transport systems inner membrane component YP_003013395.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: oan:Oant_0346 ABC transporter YP_003013396.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: bha:BH2723 beta-galactosidase YP_003013397.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2724 lactose transporter (permease) YP_003013398.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2725 lactose transporter (permease) YP_003013399.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH2726 lactose transporter (lactose-binding protein) YP_003013400.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH2727 two-component sensor histidine kinase YP_003013401.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2728 two-component response regulator YP_003013402.1 TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444; KEGG: bha:BH1031 hypothetical protein YP_003013405.1 KEGG: baa:BA_1613 hypothetical protein YP_003013407.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_2636 GCN5-related N-acetyltransferase YP_003013408.1 KEGG: baa:BA_0539 hypothetical protein YP_003013409.1 PFAM: FAD linked oxidase; Berberine/berberine domain protein; KEGG: bsu:BSU34520 hypothetical protein YP_003013410.1 KEGG: swd:Swoo_1092 hypothetical protein YP_003013411.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2019 acetyltransferase YP_003013412.1 PFAM: major facilitator superfamily MFS_1; KEGG: baa:BA_1423 sugar_tr, sugar (and other) transporter YP_003013413.1 KEGG: ATP synthase CF1 beta chain ; K02112 F-type H+-transporting ATPase beta YP_003013414.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_003013415.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bha:BH3875 hypothetical protein YP_003013416.1 PFAM: NLPA lipoprotein; KEGG: pfl:PFL_0230 NlpA family lipoprotein YP_003013417.1 PFAM: glutaminase, core; KEGG: bha:BH2627 glutaminase YP_003013418.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: hypothetical protein YP_003013419.1 PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region; KEGG: bsu:BSU09930 3'-5' exoribonuclease YhaM YP_003013420.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003013421.1 PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: bha:BH2276 hypothetical protein YP_003013422.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: lch:Lcho_3206 oxidoreductase domain-containing protein YP_003013423.1 PFAM: xylose isomerase; KEGG: aba:acid345_0333 xylose isomerase-like TIM barrel YP_003013424.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; transketolase; KEGG: bha:BH2206 2-oxoglutarate dehydrogenase E1 component YP_003013425.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; KEGG: bha:BH2205 dihydrolipoamide succinyltransferase YP_003013426.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH1869 hypothetical protein YP_003013427.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bha:BH1861 alpha-L-arabinofuranosidase YP_003013428.1 KEGG: lpc:LPC_1579 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003013429.1 PFAM: protein of unknown function DUF81; KEGG: sea:SeAg_B4251 domain of unknown function YP_003013430.1 PFAM: glycosyl hydrolase 53 domain protein; Ig domain protein; S-layer domain protein; KEGG: bha:BH2023 hypothetical protein YP_003013431.1 KEGG: bha:BH0796 hypothetical protein YP_003013432.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003013433.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003013434.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003013435.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: hypothetical protein YP_003013437.1 PFAM: restriction endonuclease; KEGG: bar:GBAA2317 Mrr restriction protein-related YP_003013438.1 PFAM: SpoVR family protein; KEGG: baa:BA_1352 hypothetical protein YP_003013439.1 PFAM: restriction modification system DNA specificity domain; KEGG: xoo:XOO3464 type I restriction enzyme StySPI specificity protein YP_003013440.1 PFAM: N-6 DNA methylase; KEGG: rpc:RPC_3652 N-6 DNA methylase YP_003013441.1 restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities YP_003013442.1 KEGG: bar:GBAA2818 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase YP_003013443.1 KEGG: Viral A-type inclusion protein repeat containing protein YP_003013445.1 Modulates the activities of several enzymes which are inactive in their acetylated form YP_003013448.1 KEGG: bha:BH1815 hypothetical protein YP_003013449.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: hypothetical protein YP_003013451.1 PFAM: Resolvase domain; Recombinase; KEGG: glo:Glov_0859 resolvase domain YP_003013452.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: nwi:Nwi_0826 XRE family transcriptional regulator YP_003013454.1 PFAM: Resolvase domain; Recombinase; KEGG: wpi:WPa_0411 site-specific recombinase, resolvase family YP_003013455.1 PFAM: Resolvase domain; Recombinase; KEGG: wol:WD0634 prophage LambdaW5, site-specific recombinase resolvase family protein YP_003013457.1 KEGG: neu:NE2310 ABC transporter YP_003013458.1 PFAM: restriction endonuclease; KEGG: bar:GBAA2317 Mrr restriction protein-related YP_003013459.1 KEGG: hypothetical protein YP_003013461.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: pfl:PFL_4436 NLP/P60 family protein YP_003013463.1 PFAM: transglutaminase; transglutaminase domain protein; SMART: transglutaminase; KEGG: ccs:CCNA_01672 transglutaminase-like enzyme, cysteine YP_003013464.1 PFAM: protein of unknown function DUF403; KEGG: reh:H16_A1181 hypothetical protein YP_003013465.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: aba:acid345_3320 protein of unknown function DUF404 YP_003013466.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: bha:BH0505 methyl-accepting chemotaxis protein YP_003013467.1 PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: bha:BH1029 serine protein kinase YP_003013468.1 KEGG: sil:SPO3144 hypothetical protein YP_003013469.1 PFAM: aminotransferase class I and II; KEGG: bha:BH1127 aminotransferase YP_003013471.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: bsu:BSU14480 transcriptional regulator YP_003013472.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: baa:BA_1119 SpoU rRNA methylase family YP_003013473.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA4833 DNA-binding response regulator PhoP YP_003013474.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_003013475.1 TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: bha:BH3270 ABC transporter (permease) YP_003013476.1 TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: vco:VC0395_A2318 glutamine synthetase YP_003013477.1 KEGG: gur:Gura_4302 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003013478.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_003013479.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: geo:Geob_0408 histidine kinase YP_003013480.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gsu:GSU0451 DNA-binding response regulator YP_003013481.1 KEGG: sat:SYN_00527 trypsin-like serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein YP_003013482.1 KEGG: baa:BA_0003 hypothetical protein YP_003013483.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bsu:BSU33080 hypothetical protein YP_003013484.1 KEGG: bsu:BSU33090 hypothetical protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein YP_003013485.1 KEGG: bsu:BSU33100 hypothetical protein YP_003013486.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: dde:Dde_3492 ammonium transporter YP_003013489.1 PFAM: 3D domain protein; KEGG: baa:BA_0029 hypothetical protein YP_003013490.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; anticodon-binding domain protein; threonyl/alanyl tRNA synthetase SAD; KEGG: bha:BH3141 threonyl-tRNA synthetase 1 YP_003013491.1 PFAM: sporulation protein YtxC; KEGG: bsu:BSU28960 hypothetical protein YP_003013493.1 TIGRFAM: methyltransferase FkbM family; KEGG: cti:RALTA_B2140 hypothetical protein YP_003013494.1 PFAM: radical SAM protein; KEGG: bha:BH3143 hypothetical protein YP_003013495.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bsu:BSU11880 cystathionine beta-lyase YP_003013496.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bar:GBAA4480 cystathionine gamma-synthase YP_003013497.1 KEGG: bha:BH2280 homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase YP_003013498.1 TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: sat:SYN_02763 magnesium and cobalt transporter CorA YP_003013499.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: gur:Gura_3859 cysteine synthase A YP_003013500.1 PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_1952 major facilitator superfamily MFS_1 YP_003013501.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: hypothetical protein YP_003013502.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: sun:SUN_0354 PHP family histidinol phosphatase/hydrolase YP_003013503.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pha:PSHAb0020 hypothetical protein YP_003013504.1 PFAM: DoxX family protein; KEGG: baa:BA_0419 hypothetical protein YP_003013505.1 PFAM: helix-turn-helix HxlR type; KEGG: bha:BH0508 hypothetical protein YP_003013506.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_003013507.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_003013508.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: bsu:BSU28450 succinate dehydrogenase (cytochrome b558 subunit) YP_003013509.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA2439 LysR family transcriptional regulator YP_003013511.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: bha:BH2663 potassium uptake protein YP_003013512.1 KEGG: bsu:BSU31100 hypothetical protein; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_003013513.1 PFAM: hypothetical protein; KEGG: sus:acid_2705 abortive infection protein YP_003013514.1 KEGG: GF21232 gene product from transcript GF21232-RA ; K03163 DNA topoisomerase I YP_003013515.1 KEGG: hypothetical protein YP_003013516.1 KEGG: bha:BH3097 excinuclease ABC subunit C; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC subunit C ; excinuclease ABC subunit C ; UvrB/UvrC protein; SMART: excinuclease ABC subunit C YP_003013518.1 KEGG: pmy:Pmen_4344 hypothetical protein YP_003013519.1 TIGRFAM: sulfate ABC transporter inner membrane protein CysW; sulfate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rme:Rmet_1377 sulfate ABC transporter permease CysW YP_003013520.1 TIGRFAM: sulfate ABC transporter inner membrane protein CysT; sulfate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: azo:azo1335 sulfate transporter permease YP_003013521.1 TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: har:HEAR0822 sulfate ABC transporter periplasmic substrate-binding protein YP_003013522.1 KEGG: bha:BH0351 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003013523.1 KEGG: bha:BH0028 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003013524.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU11400 oligopeptide ABC transporter (permease) YP_003013525.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU11390 oligopeptide ABC transporter (permease) YP_003013526.1 PFAM: extracellular solute-binding protein family 5; KEGG: hypothetical protein YP_003013527.1 SMART: ATPase AAA; KEGG: bha:BH3144 primosomal protein DnaI YP_003013528.1 PFAM: replication initiation and membrane attachment family protein; KEGG: bha:BH3145 chromosome replication initiation/membrane attachment protein YP_003013529.1 KEGG: baa:BA_0030 hypothetical protein YP_003013530.1 PFAM: chlorite dismutase; KEGG: bsu:BSU37670 heme peroxidase YP_003013532.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bsu:BSU32100 hypothetical protein YP_003013533.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bar:GBAA5160 pyridine nucleotide-disulphide oxidoreductase YP_003013534.1 KEGG: bha:BH1139 hypothetical protein YP_003013536.1 KEGG: hypothetical protein YP_003013537.1 KEGG: bar:GBAA0375 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003013538.1 PFAM: metallophosphoesterase; KEGG: hap:HAPS_2239 phosphohydrolase YP_003013539.1 KEGG: hypothetical protein YP_003013540.1 PFAM: protein of unknown function DUF214; KEGG: bsu:BSU34690 hypothetical protein YP_003013541.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU34700 hypothetical protein YP_003013542.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bsu:BSU34710 hypothetical protein YP_003013543.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA4671 DNA-binding response regulator YP_003013544.1 KEGG: hypothetical protein YP_003013545.1 TIGRFAM: phosphate binding protein; KEGG: bsu:BSU24990 phosphate ABC transporter (binding protein) YP_003013546.1 TIGRFAM: phosphate ABC transporter inner membrane protein PstC; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: baa:BA_1304 binding-protein-dependent transporters inner membrane component YP_003013547.1 TIGRFAM: phosphate ABC transporter inner membrane protein PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: baa:BA_1305 binding-protein-dependent transporters inner membrane component YP_003013548.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bha:BH3410 hypothetical protein YP_003013549.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bha:BH3411 hypothetical protein YP_003013550.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bha:BH3415 NADH dehydrogenase YP_003013551.1 PFAM: protein of unknown function DUF1450; KEGG: baa:BA_0044 hypothetical protein YP_003013552.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: baa:BA_0058 NifU-like domain YP_003013553.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003013555.1 TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein; KEGG: gsu:GSU2004 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein YP_003013556.1 PFAM: cytochrome oxidase assembly; KEGG: bha:BH2617 cytochrome Caa3 oxidase YP_003013557.1 PFAM: thioredoxin domain; KEGG: bar:GBAA4945 thioredoxin family protein YP_003013558.1 PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein YP_003013559.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: baa:BA_2340 polysacc_synt, polysaccharide biosynthesis protein YP_003013560.1 PFAM: protein of unknown function DUF1037; KEGG: bha:BH1247 hypothetical protein YP_003013561.1 PFAM: protein of unknown function DUF456; KEGG: bsu:BSU25030 hypothetical protein YP_003013562.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: bha:BH0497 hypothetical protein YP_003013563.1 PFAM: ABC transporter; KEGG: bsu:BSU30740 manganese ABC transporter YP_003013564.1 PFAM: ABC transporter; transporter permease protein; KEGG: bsu:BSU30750 manganese ABC transporter membrane protein YP_003013565.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU30760 manganese ABC transporter ATP-binding protein YP_003013566.1 PFAM: periplasmic solute binding protein; KEGG: bsu:BSU30770 manganese ABC transporter membrane protein YP_003013567.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bar:GBAA2504 penicillin-binding protein YP_003013568.1 PFAM: transglutaminase; SMART: transglutaminase; KEGG: hypothetical protein YP_003013570.1 PFAM: major facilitator superfamily MFS_1; KEGG: baa:BA_1261 sugar_tr, sugar (and other) transporter YP_003013572.1 PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: bsu:BSU32780 hypothetical protein YP_003013573.1 PFAM: Auxin Efflux Carrier; KEGG: bar:GBAA2139 hypothetical protein YP_003013574.1 PFAM: electron transporter SCO1/SenC; KEGG: scl:sce2899 lipoprotein YP_003013575.1 converts protoheme IX and farnesyl diphosphate to heme O YP_003013576.1 TIGRFAM: spore coat protein GerQ; KEGG: bsu:BSU37920 hypothetical protein YP_003013578.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: bsu:BSU08620 hypothetical protein YP_003013579.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: bha:BH1138 small acid-soluble spore protein (major alpha-type SASP) YP_003013581.1 KEGG: bha:BH2870 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003013582.1 PFAM: permease; KEGG: bar:GBAA2051 hypothetical protein YP_003013583.1 PFAM: protein of unknown function DUF1980; KEGG: hypothetical protein YP_003013585.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bar:GBAA0575 methyl-accepting chemotaxis protein YP_003013586.1 PFAM: polysaccharide deacetylase; KEGG: baa:BA_2464 polysaccharide deacetylase YP_003013587.1 PFAM: 3D domain protein; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: bsu:BSU19210 hypothetical protein YP_003013588.1 PFAM: SCP-like extracellular; KEGG: baa:BA_1833 hypothetical protein YP_003013589.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: bha:BH1248 NADH-dependent dyhydrogenase YP_003013590.1 PFAM: xylose isomerase; KEGG: bha:BH3346 hypothetical protein YP_003013592.1 KEGG: GK25061 gene product from transcript GK25061-RA YP_003013593.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SirA family protein; rhodanese; SMART: Rhodanese domain protein; KEGG: pca:Pcar_0429 uncharacterized NAD(FAD)-dependent dehydrogenase YP_003013594.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bar:GBAA4483 ArsR family transcriptional regulator YP_003013595.1 PFAM: major facilitator superfamily MFS_1; KEGG: pzu:PHZ_c0896 permease of the major facilitator superfamily YP_003013597.1 KEGG: bha:BH0493 hypothetical protein YP_003013598.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3842 two-component response regulator YP_003013599.1 KEGG: baa:BA_0110 hypothetical protein YP_003013600.1 PFAM: beta-lactamase; KEGG: baa:BA_0111 lactamase_B, metallo-beta-lactamase superfamily YP_003013602.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ban:BA2864 acetyltransferase YP_003013606.1 PFAM: aminoglycoside phosphotransferase; KEGG: lpp:lpp0587 hypothetical protein YP_003013607.1 PFAM: NUDIX hydrolase; KEGG: bar:GBAA5043 MutT/NUDIX family protein YP_003013608.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: bsu:BSU09240 hypothetical protein YP_003013609.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: bar:GBAA2075 SPFH domain-containing protein/band 7 family protein YP_003013610.1 PFAM: protein of unknown function DUF107; KEGG: bar:GBAA2074 hypothetical protein YP_003013614.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_1981 hypothetical protein YP_003013615.1 PFAM: NUDIX hydrolase; KEGG: bar:GBAA2926 MutT/NUDIX family protein YP_003013617.1 KEGG: ccs:CCNA_02636 hypothetical protein YP_003013618.1 KEGG: mmw:Mmwyl1_1514 hypothetical protein YP_003013619.1 KEGG: bar:GBAA2424 hypothetical protein YP_003013621.1 TIGRFAM: allophanate hydrolase; PFAM: amidase; KEGG: bcm:Bcenmc03_6429 allophanate hydrolase YP_003013622.1 PFAM: purine catabolism PurC domain protein; KEGG: bsu:BSU32420 transcriptional regulator YP_003013623.1 PFAM: cupin; Cupin domain protein; KEGG: gur:Gura_0223 cupin 2 domain-containing protein YP_003013624.1 TIGRFAM: ring-opening amidohydrolase; KEGG: avi:Avi_5653 cyanuric acid amidohydrolase YP_003013625.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: jan:Jann_3753 binding-protein-dependent transport systems inner membrane component YP_003013626.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bbt:BBta_7628 ABC transporter ATP-binding protein YP_003013627.1 PFAM: NMT1/THI5 like domain protein; KEGG: dal:Dalk_3399 NMT1/THI5 like domain protein YP_003013628.1 PFAM: isochorismatase hydrolase; KEGG: bpy:Bphyt_5240 isochorismatase hydrolase YP_003013629.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2081 acetyltransferase YP_003013631.1 PFAM: alpha/beta hydrolase fold; KEGG: bsu:BSU10900 hypothetical protein YP_003013632.1 PFAM: OsmC family protein; KEGG: sus:acid_1381 OsmC family protein YP_003013633.1 PFAM: aminoglycoside phosphotransferase; KEGG: rfe:RF_0428 acetyltransferase YP_003013634.1 KEGG: bar:GBAA_pXO1_0022 hypothetical protein YP_003013638.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xop:PXO_03213 acetyltransferase YP_003013640.1 KEGG: baa:BA_1988 hypothetical protein YP_003013641.1 KEGG: rle:pRL100274 fucosidase YP_003013642.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003013643.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_2607 transcriptional regulator, AraC family YP_003013644.1 PFAM: xylose isomerase; KEGG: rle:pRL100283 hypothetical protein YP_003013645.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: eca:ECA2140 oxidoreductase YP_003013646.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: dal:Dalk_1674 oxidoreductase YP_003013647.1 KEGG: dol:Dole_2911 P4 family phage/plasmid primase YP_003013648.1 KEGG: bsu:BSU25710 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003013650.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds YP_003013651.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: baa:BA_0519 REC, CheY-homologous receiver domain YP_003013652.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH2214 two-component sensor histidine kinase YP_003013653.1 KEGG: baa:BA_0936 hypothetical protein YP_003013654.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: bam:Bamb_5433 band 7 protein YP_003013655.1 KEGG: bvi:Bcep1808_1333 transcriptional regulator YP_003013657.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: sat:SYN_02365 3-oxoacyl-[acyl-carrier-protein] synthase YP_003013658.1 SMART: helix-turn-helix domain protein; KEGG: rle:RL4049 hypothetical protein YP_003013659.1 PFAM: fumarylacetoacetate hydrolase; KEGG: bid:Bind_2377 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_003013660.1 PFAM: polysaccharide deacetylase; KEGG: hch:HCH_05590 xylanase/chitin deacetylase YP_003013662.1 KEGG: abc:ACICU_01891 RTX toxin YP_003013663.1 KEGG: lhk:LHK_03172 TolB YP_003013664.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: scl:sce0385 two-component sensor histidine kinase YP_003013665.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bsu:BSU29110 two-component response regulator YP_003013666.1 PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: bha:BH0532 hypothetical protein YP_003013668.1 KEGG: bar:GBAA0256 hypothetical protein YP_003013669.1 PFAM: nitroreductase; KEGG: bsu:BSU05660 hypothetical protein YP_003013670.1 PFAM: protein of unknown function UPF0074; KEGG: scl:sce5747 rrf2 family protein YP_003013671.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: bha:BH0531 hypothetical protein YP_003013672.1 PFAM: beta-lactamase; KEGG: bar:GBAA4485 metallo-beta-lactamase family protein YP_003013673.1 KEGG: baa:BA_1926 hypothetical protein YP_003013674.1 PFAM: hypothetical protein; KEGG: bsu:BSU18190 hypothetical protein YP_003013675.1 KEGG: noc:Noc_1090 chain A, red copper protein nitrosocyanin YP_003013677.1 PFAM: S-layer domain protein; propeptide PepSY amd peptidase M4; KEGG: hypothetical protein YP_003013678.1 TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein YP_003013679.1 KEGG: bha:BH1142 hypothetical protein YP_003013680.1 KEGG: bha:BH2208 hypothetical protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein YP_003013681.1 PFAM: ATP dependent DNA ligase; KEGG: afw:Anae109_0939 DNA ligase D YP_003013682.1 TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: bha:BH2209 ATP-dependent DNA ligase YP_003013683.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: bha:BH2858 cardiolipin synthetase YP_003013684.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NAD-dependent epimerase/dehydratase; KEGG: baa:BA_1766 NAD dependent epimerase/dehydratase family YP_003013685.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: mxa:MXAN_4613 dTDP-glucose 4,6-dehydratase YP_003013686.1 KEGG: baa:BA_1764 dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003013687.1 KEGG: bsu:BSU09090 hypothetical protein YP_003013688.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU09080 hypothetical protein YP_003013689.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bha:BH3670 attenuator for lytABC and LytR expression YP_003013690.1 KEGG: gsu:GSU1202 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, truncation YP_003013691.1 TIGRFAM: capsular exopolysaccharide family; KEGG: bha:BH3668 capsular polysaccharide biosynthesis YP_003013692.1 PFAM: type IV pilus assembly PilZ YP_003013693.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bar:GBAA3138 transcriptional regulator AnsR YP_003013694.1 KEGG: bsu:BSU18730 hypothetical protein YP_003013695.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase subunit alpha domain protein; glutamate synthase; glutamine amidotransferaseI; KEGG: bha:BH1728 glutamate synthase (large subunit) YP_003013696.1 PFAM: copper amine oxidase domain protein; lipolytic protein G-D-S-L family; KEGG: hypothetical protein YP_003013697.1 KEGG: bsu:BSU31460 kinase-associated protein B YP_003013698.1 PFAM: monogalactosyldiacylglycerol synthase; KEGG: bur:Bcep18194_B0550 monogalactosyldiacylglycerol synthase YP_003013699.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: sat:SYN_00517 NAD-dependent malic enzyme YP_003013700.1 PFAM: acyltransferase; KEGG: vpa:VP2966 inner membrane protein YP_003013701.1 PFAM: polysaccharide deacetylase; KEGG: hch:HCH_05590 xylanase/chitin deacetylase YP_003013702.1 PFAM: acyltransferase; KEGG: vpa:VP2966 inner membrane protein YP_003013703.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bsu:BSU06320 hypothetical protein YP_003013704.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA2948 ABC transporter ATP-binding protein YP_003013705.1 PFAM: oxidoreductase; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: bha:BH2165 hypothetical protein YP_003013706.1 KEGG: bar:GBAA2247 hypothetical protein YP_003013707.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: bsu:BSU21880 hypothetical protein YP_003013708.1 PFAM: transglutaminase; SMART: transglutaminase; KEGG: bar:GBAA1995 protease YP_003013709.1 PFAM: sulfatase; KEGG: bsu:BSU24840 hypothetical protein YP_003013710.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: nmu:Nmul_A1940 glycoside hydrolase family protein YP_003013711.1 PFAM: glycoside hydrolase family 43; KEGG: scl:sce3118 hypothetical protein YP_003013712.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1866 sugar transporter (permease) (binding protein dependent transporter) YP_003013713.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1865 sugar transporter (permease) (binding protein dependent transporter) YP_003013714.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein YP_003013715.1 KEGG: ret:RHE_PE00196 ArsR family transcriptional regulator YP_003013716.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bha:BH2117 LysR family transcriptional regulator YP_003013717.1 KEGG: rso:RSc0282 hypothetical protein YP_003013718.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bha:BH3077 MarR family transcriptional regulator YP_003013719.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU40680 hypothetical protein YP_003013720.1 KEGG: ara:Arad_12475 hypothetical protein YP_003013721.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:acid_3742 alpha-L-rhamnosidase YP_003013724.1 PFAM: aldose 1-epimerase; KEGG: bsu:BSU18360 hypothetical protein YP_003013725.1 PFAM: protein of unknown function DUF1680; KEGG: sus:acid_6519 hypothetical protein YP_003013726.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003013727.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein YP_003013728.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein YP_003013729.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein YP_003013730.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: smt:Smal_2681 monosaccharide-transporting ATPase YP_003013731.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1865 sugar transporter (permease) (binding protein dependent transporter) YP_003013732.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_456 sugar transporter (sugar-binding protein) YP_003013733.1 PFAM: conserved hypothetical protein; KEGG: hypothetical LOC367592 ; K09704 hypothetical protein YP_003013735.1 PFAM: GntR family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: hypothetical protein YP_003013736.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hypothetical protein YP_003013737.1 PFAM: S-layer domain protein; carbohydrate binding family 6; KEGG: afw:Anae109_3331 carbohydrate-binding family 6 protein YP_003013738.1 KEGG: bha:BH0796 hypothetical protein YP_003013739.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003013740.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003013741.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003013742.1 PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003013743.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bha:BH1516 glucose-resistance amylase regulator YP_003013744.1 PFAM: protein of unknown function DUF1037; KEGG: bha:BH1247 hypothetical protein YP_003013745.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: bha:BH0710 hypothetical protein YP_003013746.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU10830 hypothetical protein YP_003013747.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE2726 pdu and cob operons regulatory protein YP_003013748.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone YP_003013749.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_003013750.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003013752.1 KEGG: hypothetical protein YP_003013753.1 PFAM: hypothetical protein; TPR repeat-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: hypothetical protein YP_003013754.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pae:PA3571 transcriptional regulator MmsR YP_003013755.1 PFAM: glycoside hydrolase clan GH-D; KEGG: sus:acid_0933 glycoside hydrolase, clan GH-D YP_003013756.1 PFAM: sulfatase; KEGG: bam:Bamb_3271 sulfatase YP_003013757.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003013758.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH2110 hypothetical protein YP_003013759.1 KEGG: hypothetical protein YP_003013760.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2113 ABC transporter (permease) YP_003013761.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_003013762.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: pat:Patl_0128 glycoside hydrolase family protein YP_003013763.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: jan:Jann_2050 AraC family transcriptional regulator YP_003013764.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003013765.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003013766.1 KEGG: rle:RL3853 protein involved in invasion YP_003013767.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0482 lipoprotein YP_003013768.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0481 ABC transporter (permiase) YP_003013769.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_003013771.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: apl:APL_1191 NADPH dehydrogenase YP_003013772.1 PFAM: regulatory protein LysR; KEGG: amc:MADE_01219 LysR-family transcriptional regulator YP_003013773.1 KEGG: hypothetical protein; PFAM: coagulation factor 5/8 type domain protein; S-layer domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; coagulation factor 5/8 type domain protein; Parallel beta-helix repeat YP_003013774.1 PFAM: glycosidase PH1107-related; KEGG: sat:SYN_01903 cytoplasmic protein YP_003013775.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3682 sugar ABC transporter (permease) YP_003013776.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3681 sugar ABC transporter (permease) YP_003013777.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_0944 extracellular solute-binding protein YP_003013778.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003013779.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003013780.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bha:BH2748 NAD(P)H oxidoreductase YP_003013781.1 PFAM: protein of unknown function UPF0074; KEGG: bar:GBAA4743 rrf2 family protein YP_003013782.1 PFAM: copper amine oxidase domain protein; KEGG: cja:CJA_0033 lipoprotein YP_003013783.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; KEGG: smd:Smed_4281 NmrA family protein YP_003013784.1 PFAM: GerA spore germination protein; KEGG: baa:BA_1348 hypothetical protein YP_003013785.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bar:GBAA4986 spore germination protein GerHC YP_003013786.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bha:BH1598 spore germination protein YP_003013787.1 PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: aba:acid345_0901 beta-galactosidase YP_003013788.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2229 AraC/XylS family transcriptional regulator YP_003013789.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bar:GBAA4303 MarR family transcriptional regulator YP_003013790.1 KEGG: eca:ECA1555 hypothetical protein YP_003013791.1 KEGG: geo:Geob_1659 aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein YP_003013792.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_C0734 nitrate/sulfonate/bicarbonate ABC transporter ATPase YP_003013793.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpe:BP2614 ABC transporter, inner membrane component YP_003013794.1 PFAM: alpha-L-rhamnosidase; KEGG: kpe:KPK_2466 alpha-L-rhamnosidase family protein YP_003013795.1 PFAM: extracellular solute-binding protein family 1; KEGG: rlt:Rleg2_5608 extracellular solute-binding protein family 1 YP_003013796.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_4466 sugar ABC transporter YP_003013797.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_4465 sugar ABC transporter YP_003013798.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3680 sugar ABC transporter (sugar-binding protein) YP_003013799.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH1910 two-component response regulator YP_003013800.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003013801.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bsu:BSU27250 cystathionine beta-lyase YP_003013802.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bar:GBAA4601 O-acetylserine lyase YP_003013803.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bar:GBAA4603 hypothetical protein YP_003013804.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bid:Bind_2943 glycerophosphoryl diester phosphodiesterase YP_003013805.1 PFAM: glycoside hydrolase; KEGG: ara:Arad_9829 beta-glucosidase protein YP_003013806.1 PFAM: phosphotransferase system EIIC; KEGG: baa:BA_1379 PTS system, cellobiose-specific IIC component YP_003013807.1 KEGG: cja:CJA_3008 beta-xylosidase, , xyl39A; PFAM: glycoside hydrolase family 39; Cupin 2 conserved barrel domain protein; AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type YP_003013808.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003013809.1 PFAM: glycoside hydrolase; carbohydrate binding family 6; Ig family protein; SMART: cellulose binding type IV; KEGG: bha:BH1908 glucan 1,4-beta-glucosidase YP_003013810.1 PFAM: major facilitator superfamily MFS_1; KEGG: baa:BA_1418 sugar_tr, sugar (and other) transporter YP_003013811.1 PFAM: Tetracycline transcriptional regulator QacR-related domain protein; regulatory protein TetR; KEGG: baa:BA_0964 bacterial regulatory proteins, TetR family YP_003013812.1 KEGG: hypothetical protein YP_003013813.1 PFAM: acetamidase/Formamidase; copper amine oxidase domain protein; KEGG: mfa:Mfla_2104 twin-arginine translocation pathway signal YP_003013814.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bha:BH0868 transcriptional regulator YP_003013815.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pin:Ping_2733 cation diffusion facilitator family transporter YP_003013816.1 PFAM: oxidoreductase; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: scl:sce9140 oxidoreductase YP_003013817.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bsu:BSU36300 DeoR family transcriptional regulator YP_003013818.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: kpe:KPK_5058 transcriptional regulator, AraC family YP_003013819.1 PFAM: glycoside hydrolase family 35; glycoside hydrolase family 42 domain protein; KEGG: glb1; galactosidase, beta 1; K01190 beta-galactosidase YP_003013820.1 PFAM: xylose isomerase; KEGG: bph:Bphy_6774 xylose isomerase domain-containing protein YP_003013821.1 PFAM: xylose isomerase; KEGG: amc:MADE_00428 twin-arginine translocation pathway signal YP_003013822.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: rso:RS02345 hypothetical protein YP_003013823.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: esa:ESA_03275 DNA-binding transcriptional regulator AraC YP_003013824.1 KEGG: spe:Spro_2252 serine protease YP_003013825.1 PFAM: DinB family protein; KEGG: aba:acid345_0081 DinB YP_003013826.1 PFAM: ABC transporter transmembrane protein; ABC transporter related; SMART: ATPase AAA; KEGG: baa:BA_0268 ABC transporter YP_003013827.1 PFAM: transporter permease; KEGG: bha:BH1082 ferrichrome ABC transporter (permease) YP_003013828.1 PFAM: transporter permease; KEGG: bsu:BSU33310 ferrichrome ABC transporter (permease) YP_003013829.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU33320 ferrichrome ABC transporter (ferrichrome-binding protein) YP_003013830.1 PFAM: helix-turn-helix- domain containing protein AraC type; periplasmic binding protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003013831.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: nmu:Nmul_A1940 glycoside hydrolase family protein YP_003013832.1 PFAM: oxidoreductase; KEGG: bha:BH2165 hypothetical protein YP_003013833.1 PFAM: hypothetical protein; KEGG: bsu:BSU19100 hypothetical protein YP_003013834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: baa:BA_0139 hypothetical protein YP_003013835.1 PFAM: phospholipase/carboxylesterase; KEGG: bsu:BSU11150 hypothetical protein YP_003013836.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: scl:sce5154 KDPG and KHG aldolase YP_003013837.1 KEGG: bha:BH0931 adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_003013838.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003013839.1 PFAM: cytochrome C class I; KEGG: smt:Smal_1045 cytochrome c class I YP_003013840.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: baa:BA_0820 ACPS, 4'-phosphopantetheinyl transferase superfamily YP_003013841.1 TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; KEGG: shl:Shal_2517 NAD synthetase YP_003013842.1 PFAM: protein of unknown function DUF1094; KEGG: bsu:BSU21860 hypothetical protein YP_003013843.1 KEGG: baa:BA_1857 hypothetical protein YP_003013845.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bar:GBAA2636 sensor histidine kinase YP_003013846.1 PFAM: alpha/beta hydrolase fold; KEGG: dal:Dalk_0147 alpha/beta hydrolase YP_003013847.1 PFAM: HI0933 family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; glucose-inhibited division protein A; KEGG: bar:GBAA4960 hypothetical protein YP_003013849.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator YP_003013850.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bha:BH0553 hypothetical protein YP_003013851.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bha:BH1494 transcriptional regulator YP_003013852.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cak:Caul_1379 L-amino-acid oxidase YP_003013853.1 PFAM: endoribonuclease L-PSP; KEGG: LAO2; mbeta non-catalytic subunit of periplasmic L-amino acid oxidase YP_003013854.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bar:GBAA2242 twin arginine-targeting protein translocase YP_003013855.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bsu:BSU17610 xylulose kinase YP_003013856.1 KEGG: bsu:BSU17600 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: xylose isomerase YP_003013858.1 PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: met:M446_5362 glycoside hydrolase family protein YP_003013859.1 KEGG: bha:BH3301 hypothetical protein YP_003013860.1 PFAM: protein of unknown function DUF1267; KEGG: baa:BA_1059 hypothetical protein YP_003013861.1 KEGG: bba:Bd2565 phage related tail fibre protein YP_003013862.1 KEGG: bsu:BSU12740 hypothetical protein YP_003013863.1 PFAM: tail fiber repeat 2 protein; KEGG: ect:ECIAI39_1973 side tail fiber protein homolog from lambdoid prophage YP_003013864.1 KEGG: nwi:Nwi_0791 hypothetical protein YP_003013865.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_003013866.1 PFAM: Baseplate J family protein; KEGG: bsu:BSU25980 hypothetical protein YP_003013867.1 KEGG: bsu:BSU25990 hypothetical protein YP_003013868.1 KEGG: bsu:BSU26000 hypothetical protein YP_003013869.1 KEGG: bsu:BSU12700 hypothetical protein YP_003013870.1 PFAM: peptidoglycan-binding LysM; KEGG: bsu:BSU26020 hypothetical protein YP_003013871.1 TIGRFAM: phage tape measure protein; KEGG: hdu:HD0140 tail length tape measure protein YP_003013872.1 PFAM: XkdN-like protein; KEGG: bsu:BSU26040 hypothetical protein YP_003013873.1 KEGG: bsu:BSU12660 hypothetical protein YP_003013874.1 KEGG: bsu:BSU12650 hypothetical protein YP_003013878.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: vpa:VP1778 DNA-binding transcriptional repressor PuuR YP_003013879.1 PFAM: ROK family protein; KEGG: bha:BH2758 transcriptional repressor of the xylose operon YP_003013880.1 SMART: PKD domain containing protein; KEGG: similar to CG7565-PA YP_003013881.1 PFAM: S-layer domain protein; KEGG: bar:GBAA0898 N-acetylmuramoyl-L-alanine amidase YP_003013882.1 PFAM: glycoside hydrolase family 5; KEGG: aca:ACP_0988 glycosyl hydrolase, family 5 YP_003013883.1 PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA1830 fosmidomycin resistance protein YP_003013884.1 KEGG: bar:GBAA3427 hypothetical protein YP_003013886.1 PFAM: aldose 1-epimerase; KEGG: bsu:BSU18360 hypothetical protein YP_003013887.1 KEGG: smt:Smal_3964 hypothetical protein YP_003013888.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: rso:RS00875 ornithine cyclodeaminase protein YP_003013889.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aca:ACP_1153 pyridoxal-phosphate dependent enzyme/ornithine cyclodeaminase family protein YP_003013890.1 KEGG: spe:Spro_0345 coenzyme F390 synthetase-like protein YP_003013891.1 KEGG: hypothetical protein YP_003013892.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mxa:MXAN_4199 macrolide efflux ABC transporter ATP-binding protein YP_003013893.1 KEGG: baa:BA_2350 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A YP_003013894.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bsu:BSU10320 hypothetical protein YP_003013895.1 PFAM: O-methyltransferase family 3; KEGG: bha:BH1828 O-methyltransferase YP_003013896.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dat:HRM2_11130 LysR YP_003013897.1 PFAM: alpha amylase catalytic region; S-layer domain protein; glycoside hydrolase family 13 domain protein; Fibronectin type III domain protein; SMART: alpha amylase catalytic sub domain; Fibronectin type III domain protein; alpha amylase all-beta; KEGG: hypothetical protein YP_003013898.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bar:GBAA2964 acetyltransferase YP_003013899.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cko:CKO_01397 hypothetical protein YP_003013900.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: eca:ECA2140 oxidoreductase YP_003013901.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: hypothetical protein YP_003013903.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bha:BH1874 alpha-L-arabinosidase YP_003013904.1 KEGG: bha:BH1876 hypothetical protein YP_003013905.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003013906.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003013907.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: similar to phytanoyl-CoA dioxygenase, peroxisomal precursor (phytanoyl-CoA alpha-hydroxylase) (PhyH) (Phytanic acid oxidase) YP_003013908.1 PFAM: PfkB domain protein; KEGG: bsu:BSU06170 hypothetical protein YP_003013909.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bar:GBAA0664 ribose operon repressor YP_003013910.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003013911.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hypothetical protein YP_003013912.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3560 AlgQ1, multiple sugar transporter substrate-binding protein YP_003013913.1 PFAM: glycosyl hydrolase family 32; SMART: glycoside hydrolase family 32; KEGG: bsu:BSU27030 levanase YP_003013914.1 PFAM: Luciferase-like monooxygenase; KEGG: pen:PSEEN4761 luciferase-like monooxygenase YP_003013915.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_1664 EmrB/QacA family drug resistance transporter YP_003013916.1 KEGG: eba:ebA5654 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003013917.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA4731 oligopeptide ABC transporter oligopeptide-binding protein YP_003013918.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA4732 oligopeptide ABC transporter permease protein YP_003013919.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0448 ABC transporter extracellular solute binding protein YP_003013920.1 KEGG: ara:Arad_7721 nitrilotriacetate monooxygenase protein component A YP_003013921.1 KEGG: hypothetical protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003013922.1 KEGG: ara:Arad_7721 nitrilotriacetate monooxygenase protein component A YP_003013923.1 KEGG: sus:acid_4591 hypothetical protein YP_003013924.1 KEGG: bsu:BSU29290 hypothetical protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003013925.1 PFAM: Luciferase-like monooxygenase; KEGG: atu:Atu3421 hypothetical protein YP_003013926.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA0857 amino acid ABC transporter ATP-binding protein YP_003013927.1 TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU29350 hypothetical protein YP_003013928.1 TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU29360 hypothetical protein YP_003013929.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bsu:BSU29370 hypothetical protein YP_003013930.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU39510 hypothetical protein YP_003013931.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppf:Pput_3775 LysR family transcriptional regulator YP_003013932.1 KEGG: xfm:Xfasm12_0086 alpha-L-fucosidase YP_003013933.1 PFAM: glycoside hydrolase family 35; KEGG: similar to galactosidase, beta 1-like 2 YP_003013934.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003013935.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rlt:Rleg2_5335 binding-protein-dependent transport systems inner membrane component YP_003013936.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rle:pRL120664 permease of ABC transporter YP_003013937.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003013938.1 PFAM: histidine kinase HAMP region domain protein; histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: hypothetical protein YP_003013939.1 PFAM: glycosyl hydrolase family 88; KEGG: bha:BH2054 unsaturated glucuronyl hydrolase YP_003013940.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 43; KEGG: scl:sce4015 hypothetical protein YP_003013942.1 PFAM: DoxX family protein; TQO small subunit DoxD; KEGG: bha:BH2253 hypothetical protein YP_003013943.1 KEGG: bha:BH1654 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003013944.1 KEGG: baa:BA_1211 EAL, domain of unknown function 2; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: PAC repeat-containing protein; PAS domain containing protein YP_003013945.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sfu:Sfum_1664 two component transcriptional regulator, LuxR family YP_003013947.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bsu:BSU37310 Crp/Fnr family transcriptional regulator YP_003013948.1 KEGG: baa:BA_1081 radical activating enzyme; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: radical SAM protein YP_003013949.1 KEGG: baa:BA_1080 pyruvate formate lyase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_003013950.1 KEGG: sat:SYN_00482 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003013951.1 PFAM: hemerythrin HHE cation binding domain protein YP_003013952.1 KEGG: bha:BH2841 transposase (08) YP_003013953.1 PFAM: alpha-L-rhamnosidase; KEGG: aca:ACP_0773 alfa-L-rhamnosidase homolog YP_003013954.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU30150 hypothetical protein YP_003013955.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU07100 lipoprotein YP_003013956.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003013957.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003013958.1 KEGG: eca:ECA2408 pectin acetylesterase YP_003013959.1 PFAM: regulatory protein TetR; KEGG: ara:Arad_0722 transcriptional regulator protein YP_003013960.1 PFAM: MMPL domain protein; KEGG: bsu:BSU05430 hypothetical protein YP_003013961.1 PFAM: lipolytic protein G-D-S-L family; KEGG: pat:Patl_0828 lipolytic enzyme, G-D-S-L YP_003013962.1 PFAM: radical SAM protein; KEGG: bha:BH2218 hypothetical protein YP_003013963.1 KEGG: sensory histidine protein kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003013964.1 PFAM: xylose isomerase; KEGG: sus:acid_1577 xylose isomerase domain-containing protein YP_003013966.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003013967.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003013968.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003013969.1 PFAM: S-layer domain protein; Ig domain protein group 2 domain protein; SMART: hypothetical protein; KEGG: hypothetical protein YP_003013970.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_2573 binding-protein-dependent transport systems inner membrane component YP_003013971.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_2572 binding-protein-dependent transport systems inner membrane component YP_003013972.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2571 extracellular solute-binding protein YP_003013973.1 PFAM: glycoside hydrolase family 31; KEGG: predicted protein YP_003013974.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: similar to predicted protein YP_003013975.1 PFAM: Fibronectin type III domain protein; carbohydrate binding family 6; SMART: Fibronectin type III domain protein; cellulose binding type IV; KEGG: sus:acid_6160 allergen V5/TPX-1 family protein YP_003013976.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hch:HCH_06913 transcriptional regulator YP_003013977.1 PFAM: DoxX family protein; KEGG: baa:BA_0419 hypothetical protein YP_003013978.1 PFAM: protein of unknown function DUF896; KEGG: bsu:BSU17880 hypothetical protein YP_003013980.1 PFAM: DinB family protein; KEGG: hypothetical protein YP_003013981.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: bsu:BSU07900 hypothetical protein YP_003013982.1 PFAM: RDD domain containing protein; KEGG: mlo:mll8330 hypothetical protein YP_003013983.1 PFAM: protein of unknown function DUF344; KEGG: msl:Msil_0239 protein of unknown function DUF344 YP_003013984.1 PFAM: toxic anion resistance family protein; KEGG: hch:HCH_05411 uncharacterized protein involved in tellurite resistance YP_003013985.1 PFAM: von Willebrand factor A; SMART: von Willebrand factor A; KEGG: von Willebrand factor A domain containing protein YP_003013986.1 KEGG: hch:HCH_05412 hypothetical protein YP_003013988.1 PFAM: NUDIX hydrolase; KEGG: bar:GBAA3685 MutT/NUDIX family protein YP_003013990.1 PFAM: cell wall hydrolase SleB; KEGG: bsu:BSU02600 cell wall hydrolase YP_003013991.1 PFAM: ABC transporter; KEGG: bha:BH1167 hypothetical protein YP_003013992.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH1166 ABC transporter ATP-binding protein YP_003013993.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA3048 ABC transporter ATP-binding protein YP_003013994.1 PFAM: GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bha:BH1164 GntR family transcriptional regulator YP_003013995.1 KEGG: cja:CJA_1095 hypothetical protein YP_003013996.1 PFAM: protein of unknown function DUF420; KEGG: afw:Anae109_0944 hypothetical protein YP_003013997.1 TIGRFAM: cytochrome C oxidase assembly factor CtaG; KEGG: bar:GBAA4150 hypothetical protein YP_003013998.1 PFAM: cytochrome C oxidase subunit IV; KEGG: eca:ECA1140 cytochrome o ubiquinol oxidase subunit IV YP_003013999.1 PFAM: cytochrome C oxidase subunit III; KEGG: bha:BH2613 cytochrome Caa3 oxidase (subunit III) YP_003014000.1 KEGG: bar:GBAA4153 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_003014001.1 TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome C class I; KEGG: bar:GBAA4154 cytochrome C oxidase subunit II YP_003014003.1 PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: bha:BH2276 hypothetical protein YP_003014004.1 PFAM: aldo/keto reductase; KEGG: mxa:MXAN_6482 aldo/keto reductase family oxidoreductase YP_003014005.1 PFAM: helix-turn-helix HxlR type; KEGG: wsu:WS1168 hypothetical protein YP_003014006.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU07760 hypothetical protein YP_003014008.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bsu:BSU07780 hypothetical protein YP_003014009.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU07790 hypothetical protein YP_003014011.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2113 ABC transporter (permease) YP_003014012.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2112 transmembrane lipoprotein YP_003014013.1 KEGG: bha:BH2111 hypothetical protein YP_003014014.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003014015.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH2110 hypothetical protein YP_003014016.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH2109 hypothetical protein YP_003014017.1 PFAM: cupin; AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH3443 AraC/XylS family transcriptional regulator YP_003014018.1 PFAM: GTP cyclohydrolase II; KEGG: bsu:BSU23260 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_003014019.1 KEGG: sus:acid_3773 hypothetical protein YP_003014020.1 TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: bsu:BSU33510 hypothetical protein YP_003014021.1 PFAM: protein of unknown function DUF156; KEGG: lhk:LHK_03033 hypothetical protein YP_003014022.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bar:GBAA4391 glycerophosphoryl diester phosphodiesterase family protein YP_003014023.1 PFAM: protein of unknown function DUF161; KEGG: bar:GBAA4506 hypothetical protein YP_003014024.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rfr:Rfer_3131 periplasmic binding protein/LacI transcriptional regulator YP_003014025.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_1087 inner-membrane translocator YP_003014026.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcm:Bcenmc03_5245 ABC transporter YP_003014027.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: hap:HAPS_1725 ABC D-ribose transporter periplasmic-binding compoent RbsB YP_003014028.1 PFAM: histidine kinase internal region; Cache domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003014029.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH2109 hypothetical protein YP_003014030.1 PFAM: PaaX domain protein domain; KEGG: mag:amb2014 phenylacetic acid-responsive transcriptional repressor YP_003014031.1 PFAM: Auxin Efflux Carrier; KEGG: bar:GBAA2139 hypothetical protein YP_003014032.1 PFAM: FAD dependent oxidoreductase; KEGG: bsu:BSU09300 glycerol-3-phosphate dehydrogenase YP_003014033.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: bsu:BSU09290 glycerol kinase YP_003014034.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: baa:BA_0880 aldehyde dehydrogenase family YP_003014035.1 PFAM: proline dehydrogenase; KEGG: sus:acid_2007 L-proline dehydrogenase YP_003014036.1 PFAM: peptidase M24; creatinase; KEGG: bar:GBAA4861 proline dipeptidase YP_003014037.1 PFAM: peptidase M29 aminopeptidase II; KEGG: baa:BA_0899 thermophilic metalloprotease (M29) YP_003014040.1 KEGG: sus:acid_5462 hypothetical protein YP_003014041.1 PFAM: DinB family protein; KEGG: bsu:BSU05630 nuclease inhibitor YP_003014042.1 PFAM: PspA/IM30 family protein; KEGG: bar:GBAA5061 hypothetical protein YP_003014043.1 KEGG: bar:GBAA5060 hypothetical protein YP_003014044.1 KEGG: bar:GBAA5059 hypothetical protein YP_003014045.1 KEGG: bar:GBAA5058 lipoprotein YP_003014046.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003014047.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH2113 ABC transporter (permease) YP_003014048.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_003014049.1 TIGRFAM: L-lactate dehydrogenase; PFAM: lactate/malate dehydrogenase; KEGG: baa:BA_0106 lactate/malate dehydrogenase, NAD binding domain YP_003014050.1 PFAM: thioredoxin domain; KEGG: hypothetical protein YP_003014051.1 KEGG: bha:BH0834 arginine-tRNA ligase; TIGRFAM: arginyl-tRNA synthetase YP_003014052.1 PFAM: NUDIX hydrolase; KEGG: bmj:BMULJ_04405 NUDIX hydrolase YP_003014056.1 PFAM: Luciferase-like monooxygenase; KEGG: bar:GBAA2016 luciferase family protein YP_003014057.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bha:BH1510 short chain dehydrogenase/reductase family oxidoreductase YP_003014058.1 KEGG: bar:GBAA3871 DNA-3-methyladenine glycosidase; PFAM: HhH-GPD family protein; 8-oxoguanine DNA glycosylase domain protein; SMART: HhH-GPD family protein YP_003014059.1 KEGG: bar:GBAA3869 ADA regulatory protein/6-O-methylguanine-DNA methyltransferase; PFAM: Ada metal-binding domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type YP_003014060.1 KEGG: bsu:BSU01820 O6-methylguanine-DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_003014061.1 KEGG: gur:Gura_1892 threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003014062.1 KEGG: bar:GBAA4477 N-acetylglucosaminyl transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; glycosyltransferase 28 domain YP_003014063.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bar:GBAA4962 ArsR family transcriptional regulator YP_003014064.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bar:GBAA4963 hypothetical protein YP_003014065.1 PFAM: glucose sorbosone dehydrogenase; KEGG: bha:BH2090 glucose dehydrogenase-B YP_003014067.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bar:GBAA2502 ECF subfamily RNA polymerase sigma factor YP_003014068.1 KEGG: baa:BA_1536 hypothetical protein YP_003014069.1 PFAM: protein of unknown function DUF72; KEGG: bha:BH3455 hypothetical protein YP_003014070.1 PFAM: aminotransferase class I and II; aminotransferase class V; KEGG: bha:BH3350 hypothetical protein YP_003014071.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_003014072.1 PFAM: GntR family transcriptional regulator; aminotransferase class I and II; SMART: GntR family transcriptional regulator; KEGG: bar:GBAA2609 GntR family transcriptional regulator YP_003014073.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B5463 short-chain dehydrogenase/reductase SDR YP_003014074.1 PFAM: regulatory protein TetR; KEGG: pla:Plav_1784 TetR family transcriptional regulator YP_003014075.1 PFAM: S-layer domain protein; glycoside hydrolase family 18; SMART: chitinase II; KEGG: hypothetical protein YP_003014077.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bsu:BSU02810 hypothetical protein YP_003014078.1 PFAM: polysaccharide deacetylase; KEGG: xau:Xaut_3452 chitin deacetylase YP_003014079.1 PFAM: MEKHLA domain protein; KEGG: neu:NE0286 hypothetical protein YP_003014080.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: aba:acid345_4292 HAD-superfamily hydrolase, subfamily IA, variant 2 YP_003014081.1 PFAM: protein of unknown function DUF336; KEGG: bar:GBAA3449 hypothetical protein YP_003014082.1 KEGG: bar:GBAA2857 hypothetical protein YP_003014083.1 PFAM: helix-turn-helix HxlR type; KEGG: baa:BA_1419 protein of unknown function DUF24 YP_003014084.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gsu:GSU0802 short chain dehydrogenase YP_003014085.1 PFAM: Squalene/phytoene synthase; KEGG: Squalene and phytoene synthases family protein ; K00801 farnesyl-diphosphate farnesyltransferase YP_003014087.1 KEGG: hypothetical protein YP_003014088.1 KEGG: bsu:BSU09780 hypothetical protein YP_003014089.1 KEGG: hhe:HH0003 hypothetical protein YP_003014090.1 PFAM: NLP/P60 protein; KEGG: sun:SUN_0826 hypothetical protein YP_003014091.1 PFAM: alpha/beta hydrolase; KEGG: swp:swp_4931 lipase/esterase YP_003014092.1 KEGG: bha:BH2943 hypothetical protein YP_003014094.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: baa:BA_1322 pfkB family carbohydrate kinase YP_003014095.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: bha:BH1434 glycine oxidase (sarcosine oxidase) YP_003014096.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_003014097.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: bha:BH1432 hypothetical protein YP_003014098.1 KEGG: bha:BH1431 thiamine phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003014099.1 catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways YP_003014100.1 PFAM: NMT1/THI5 like domain protein; KEGG: bar:GBAA0728 ABC transporter substrate-binding protein YP_003014101.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: baa:BA_1315 sulfonate/nitrate transporter permease YP_003014102.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: azc:AZC_2445 ABC transporter ATP-binding protein YP_003014103.1 PFAM: TENA/THI-4 domain protein; KEGG: bha:BH2679 transcriptional regulator of extracellular enzyme genes YP_003014104.1 KEGG: bar:GBAA1805 hypothetical protein YP_003014105.1 PFAM: regulatory protein TetR; KEGG: bha:BH1002 TetR family transcriptional regulator YP_003014106.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA3653 ABC transporter ATP-binding protein YP_003014107.1 KEGG: bsu:BSU09090 hypothetical protein YP_003014108.1 PFAM: glycosidase PH1107-related; KEGG: ypi:YpsIP31758_1530 hypothetical protein YP_003014109.1 PFAM: protein of unknown function DUF1861; KEGG: hypothetical protein YP_003014110.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ypb:YPTS_2610 binding-protein-dependent transport systems inner membrane component YP_003014111.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ypp:YPDSF_1889 sugar ABC transporter permease protein YP_003014112.1 PFAM: extracellular solute-binding protein family 1; KEGG: ypi:YpsIP31758_1527 carbohydrate ABC transporter periplasmic-binding protein YP_003014113.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bsu:BSU10840 LacI family transcription regulator YP_003014115.1 KEGG: bpd:BURPS668_2079 hypothetical protein YP_003014116.1 PFAM: adenylate cyclase; KEGG: ara:Arad_3919 hypothetical protein YP_003014117.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_003014119.1 PFAM: protein of unknown function DUF779; KEGG: xcc:XCC0102 hypothetical protein YP_003014120.1 PFAM: aldehyde dehydrogenase; KEGG: bha:BH0681 aldehyde dehydrogenase YP_003014121.1 molecular chaperone YP_003014122.1 PFAM: beta-lactamase; KEGG: bra:BRADO5532 beta-lactamase YP_003014123.1 PFAM: catalase domain protein; KEGG: bsu:BSU08820 vegetative catalase 1 YP_003014124.1 PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: sfu:Sfum_1468 glyceraldehyde-3-phosphate dehydrogenase YP_003014125.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bsu:BSU05490 hypothetical protein YP_003014126.1 PFAM: ferritin; KEGG: bha:BH1018 stress- and starvation-induced gene controlled by sigma-B YP_003014127.1 KEGG: pol:Bpro_0098 hypothetical protein YP_003014128.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: aca:ACP_3064 transporter major facilitator family YP_003014129.1 PFAM: amidohydrolase; KEGG: pau:PA14_29230 hypothetical protein YP_003014130.1 KEGG: bur:Bcep18194_A4538 hypothetical protein YP_003014131.1 PFAM: isochorismatase hydrolase; KEGG: geo:Geob_1291 isochorismatase hydrolase YP_003014132.1 PFAM: alpha/beta hydrolase fold; KEGG: bar:GBAA3165 bromoperoxidase YP_003014133.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003014134.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: hypothetical protein YP_003014135.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003014136.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA3170 LysR family transcriptional regulator YP_003014137.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA3170 LysR family transcriptional regulator YP_003014138.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bha:BH2936 hypothetical protein YP_003014139.1 PFAM: cupin; AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003014140.1 PFAM: cupin; KEGG: sus:acid_3756 cupin 2 domain-containing protein YP_003014141.1 PFAM: glycosyl transferase family 2; KEGG: hypothetical protein YP_003014142.1 PFAM: glycosyl transferase group 1; KEGG: bph:Bphy_0861 glycosyl transferase group 1 YP_003014143.1 PFAM: nucleotidyl transferase; KEGG: bsu:BSU37840 spore coat polysaccharide synthesis YP_003014144.1 KEGG: sfu:Sfum_3370 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003014145.1 KEGG: vei:Veis_0526 hypothetical protein YP_003014146.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sde:Sde_1177 threonine synthase YP_003014147.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pau:PA14_54610 transcriptional regulator YP_003014148.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH2142 hypothetical protein YP_003014150.1 PFAM: glycoside hydrolase clan GH-D; KEGG: bha:BH2223 alpha-galactosidase YP_003014151.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bha:BH2227 AraC/XylS family transcriptional regulator YP_003014152.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA3255 ABC transporter ATP-binding protein YP_003014153.1 PFAM: protein of unknown function DUF214; KEGG: bar:GBAA3256 ABC transporter permease YP_003014154.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA3260 sensor histidine kinase YP_003014155.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA3261 DNA-binding response regulator YP_003014156.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: scl:sce3039 hypothetical protein YP_003014157.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; HI0933 family protein; KEGG: scl:sce3038 L-aspartate oxidase (LASPO) YP_003014158.1 KEGG: swi:Swit_3021 peptidase S15 YP_003014159.1 KEGG: geo:Geob_1659 aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein YP_003014160.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: scl:sce3039 hypothetical protein YP_003014161.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; KEGG: scl:sce3038 L-aspartate oxidase (LASPO) YP_003014162.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA2920 sulfonate ABC transporter permease protein YP_003014163.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA2920 sulfonate ABC transporter permease protein YP_003014164.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_1664 EmrB/QacA family drug resistance transporter YP_003014165.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA4721 TetR family transcriptional regulator YP_003014166.1 KEGG: mmr:Mmar10_2918 hypothetical protein YP_003014167.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bsu:BSU33790 hypothetical protein YP_003014168.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: eum:p1ECUMN_0055 tetracycline repressor protein class B from transposon Tn10 YP_003014169.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bha:BH2163 hypothetical protein YP_003014170.1 PFAM: ABC transporter; KEGG: bar:GBAA3492 ABC transporter permease YP_003014171.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA3493 ABC transporter ATP-binding protein YP_003014172.1 KEGG: ccs:CCNA_01968 hypothetical protein YP_003014173.1 PFAM: transcriptional regulator PadR family protein; KEGG: bar:GBAA5211 PadR family transcriptional regulator YP_003014174.1 PFAM: GHMP kinase; KEGG: dde:Dde_3653 galactokinase YP_003014175.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr2185 hypothetical protein YP_003014176.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b20971 sugar uptake ABC transporter periplasmic solute-binding protein precursor YP_003014178.1 KEGG: bar:GBAA3538 hypothetical protein YP_003014179.1 KEGG: dal:Dalk_4702 methionine-R-sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase A; methionine sulfoxide reductase B YP_003014180.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bsu:BSU08300 hypothetical protein YP_003014181.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bsu:BSU08290 hypothetical protein YP_003014182.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 81; KEGG: bha:BH0236 hypothetical protein YP_003014183.1 PFAM: lipid A biosynthesis domain protein; KEGG: mlo:mlr0010 hypothetical protein YP_003014184.1 PFAM: glycosyl transferase family 2; KEGG: dde:Dde_1596 glycosyl transferase, group 2 family protein YP_003014185.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: gur:Gura_2302 NAD-dependent epimerase/dehydratase YP_003014186.1 KEGG: rpb:RPB_1585 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003014187.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; iron dependent repressor; KEGG: hypothetical protein YP_003014188.1 PFAM: protein of unknown function DUF925; phosphoglycerate mutase; KEGG: bar:GBAA2218 hypothetical protein YP_003014189.1 PFAM: cyclic nucleotide-binding; KEGG: baa:BA_1990 cNMP_binding, cyclic nucleotide-binding domain YP_003014190.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine YP_003014192.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: dvm:DvMF_2569 ATPase associated with various cellular activities AAA_3 YP_003014193.1 KEGG: aeh:Mlg_1545 hypothetical protein YP_003014195.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sil:SPO2622 acetyltransferase YP_003014196.1 KEGG: rme:Rmet_5010 hypothetical protein YP_003014197.1 PFAM: protein of unknown function DUF34; KEGG: aba:acid345_2075 hypothetical protein YP_003014198.1 PFAM: UspA domain protein; KEGG: bsu:BSU39250 hypothetical protein YP_003014199.1 PFAM: transcription activator effector binding; KEGG: bha:BH3218 hypothetical protein YP_003014200.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003014201.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003014202.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003014203.1 PFAM: glycoside hydrolase family 35; KEGG: hypothetical protein LOC100158367 YP_003014204.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: pap:PSPA7_3343 ribose operon repressor RbsR YP_003014205.1 TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; KEGG: ecp:ECP_1686 NAD synthetase YP_003014206.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase; PFAM: cytidylyltransferase; KEGG: bsu:BSU25640 nicotinic acid mononucleotide adenylyltransferase YP_003014207.1 KEGG: bsu:BSU31750 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_003014208.1 KEGG: mxa:MXAN_5574 hypothetical protein YP_003014209.1 PFAM: NUDIX hydrolase; KEGG: hch:HCH_06996 ADP-ribose pyrophosphatase YP_003014210.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bsu:BSU03720 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003014212.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH1935 spore germination protein KC YP_003014213.1 PFAM: GerA spore germination protein; KEGG: bsu:BSU03700 germination response to the combination of glucose, fructose, L-asparagine, and KCl YP_003014217.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bar:GBAA2111 glyoxalase family protein YP_003014218.1 PFAM: YCII-related; KEGG: lch:Lcho_4361 DGPFAETKE family protein YP_003014219.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: scl:sce6417 ECF subfamily RNA polymerase sigma factor YP_003014220.1 PFAM: YCII-related; KEGG: mxa:MXAN_6510 DGPF domain-containing protein YP_003014221.1 KEGG: mlo:mlr2176 hydrolase YP_003014222.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sus:acid_5432 YbaK/EbsC protein YP_003014223.1 KEGG: ccs:CCNA_00578 hypothetical protein YP_003014224.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3389 sugar-binding protein homolog YP_003014225.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH1123 hypothetical protein YP_003014226.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH1122 hypothetical protein YP_003014227.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1119 lactose transporter (permease) YP_003014228.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rlt:Rleg2_4016 binding-protein-dependent transport systems inner membrane component YP_003014229.1 PFAM: S-layer domain protein; Cna B domain protein; SMART: Parallel beta-helix repeat; KEGG: hypothetical protein YP_003014230.1 PFAM: Fibronectin type III domain protein; carbohydrate binding family 6; SMART: Fibronectin type III domain protein; KEGG: cja:CJA_1593 hypothetical protein YP_003014234.1 PFAM: extracellular solute-binding protein family 5; KEGG: baa:BA_1422 SBP_bac_5, bacterial extracellular solute-binding proteins, family 5 YP_003014236.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bsu:BSU19650 hypothetical protein YP_003014237.1 PFAM: lipolytic protein G-D-S-L family; FG-GAP repeat protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: bha:BH1116 hypothetical protein YP_003014238.1 KEGG: bar:GBAA3234 lipoprotein YP_003014239.1 PFAM: regulatory protein ArsR; transcriptional regulator TrmB; SMART: regulatory protein ArsR; KEGG: bha:BH0694 ArsR family transcriptional regulator YP_003014240.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bha:BH0695 hypothetical protein YP_003014241.1 KEGG: hypothetical protein YP_003014242.1 PFAM: OsmC family protein; KEGG: bar:GBAA4700 organic hydroperoxide resistance protein YP_003014243.1 KEGG: ypi:YpsIP31758_0331 hypothetical protein YP_003014244.1 PFAM: low temperature requirement A; KEGG: rso:RSc0230 hypothetical protein YP_003014245.1 PFAM: copper amine oxidase domain protein YP_003014246.1 KEGG: spq:SPAB_00501 hypothetical protein YP_003014247.1 KEGG: hypothetical protein YP_003014248.1 PFAM: Domain of unknown function DUF1905; KEGG: xca:xccb100_4387 hypothetical protein YP_003014250.1 SMART: helix-turn-helix domain protein; KEGG: bsu:BSU18740 hypothetical protein YP_003014251.1 KEGG: bar:GBAA3002 hypothetical protein YP_003014253.1 PFAM: aldehyde dehydrogenase; acyl-CoA reductase; KEGG: bar:GBAA2289 aldehyde dehydrogenase family protein YP_003014254.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bid:Bind_2942 AraC family transcriptional regulator YP_003014255.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bja:blr7360 hypothetical protein YP_003014257.1 KEGG: dat:HRM2_08770 GGDEF domain protein (selenocysteine protein) YP_003014258.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: sus:acid_4908 oxidoreductase domain-containing protein YP_003014259.1 PFAM: xylose isomerase; KEGG: sus:acid_0027 xylose isomerase domain-containing protein YP_003014260.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: maq:Maqu_2134 AraC protein, arabinose-binding/dimerisation YP_003014261.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bha:BH2227 AraC/XylS family transcriptional regulator YP_003014262.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein YP_003014263.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sme:SM_b20969 sugar uptake ABC transporter permease YP_003014264.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH1118 lactose transporter (permease) YP_003014265.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: mmw:Mmwyl1_0536 oxidoreductase domain-containing protein YP_003014266.1 PFAM: S-layer domain protein; KEGG: ecl:EcolC_3182 hypothetical protein YP_003014267.1 PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: glo:Glov_0642 fibronectin type III domain protein YP_003014268.1 TIGRFAM: amino acid adenylation protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; Male sterility domain; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: mxa:MXAN_4592 non-ribosomal peptide synthase YP_003014269.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: baa:BA_0955 methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer) YP_003014270.1 PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: bha:BH0789 hypothetical protein YP_003014271.1 KEGG: aba:acid345_1143 hypothetical protein YP_003014272.1 PFAM: conserved hypothetical protein; KEGG: bha:BH0790 hypothetical protein YP_003014273.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003014274.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003014275.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003014276.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0793 two-component sensor response regulator YP_003014277.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bha:BH0792 two-component sensor histidine kinase YP_003014278.1 PFAM: esterase; KEGG: ecr:ECIAI1_1929 conserved hypothetical protein, alpha/beta-hydrolases and esterase YP_003014281.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: rlt:Rleg2_4779 oxidoreductase YP_003014282.1 PFAM: protein of unknown function DUF1037; KEGG: bha:BH1247 hypothetical protein YP_003014283.1 PFAM: extracellular solute-binding protein family 1; KEGG: atu:Atu3024 ABC transporter transmembrane protein (sugar) YP_003014284.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30170 hypothetical protein YP_003014285.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003014286.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003014287.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH1123 hypothetical protein YP_003014288.1 PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: hypothetical protein YP_003014289.1 PFAM: regulatory protein TetR; KEGG: bha:BH0719 TetR/AcrR family transcriptional regulator YP_003014290.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3688 sugar transporter (permease) YP_003014291.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: smd:Smed_4135 binding-protein-dependent transport systems inner membrane component YP_003014292.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003014293.1 PFAM: LrgB family protein; KEGG: tcx:Tcr_1938 LrgB-like protein YP_003014294.1 PFAM: LrgA family protein; KEGG: nme:NMB2003 hypothetical protein YP_003014295.1 PFAM: peptidase M56 BlaR1; KEGG: bar:GBAA1079 hypothetical protein YP_003014296.1 PFAM: Penicillinase repressor; KEGG: baa:BA_1629 hypothetical protein YP_003014298.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: scl:sce7498 short chain dehydrogenase YP_003014299.1 KEGG: pfo:Pfl01_2578 hypothetical protein YP_003014300.1 PFAM: oxidoreductase; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: smd:Smed_5686 glycosyl transferase group 1 YP_003014301.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bar:GBAA2560 sensor histidine kinase YP_003014302.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA2561 DNA-binding response regulator YP_003014303.1 KEGG: bsu:BSU04560 D-alanyl-alanine synthetase A; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp YP_003014304.1 KEGG: bha:BH0520 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_003014305.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bha:BH1810 D-alanyl-D-alanine carboxypeptidase YP_003014306.1 KEGG: ppr:PBPRA2021 hypothetical protein YP_003014307.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003014308.1 PFAM: sulfatase; KEGG: pol:Bpro_3441 sulfatase YP_003014309.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: nmu:Nmul_A1940 glycoside hydrolase family protein YP_003014310.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: hypothetical protein; K01209 alpha-N-arabinofuranosidase YP_003014311.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hypothetical protein YP_003014312.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003014313.1 PFAM: extracellular solute-binding protein family 1; KEGG: atu:Atu3024 ABC transporter transmembrane protein (sugar) YP_003014314.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003014315.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003014316.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_0276 helix-turn-helix domain-containing protein YP_003014317.1 KEGG: ccr:CC_2142 hypothetical protein YP_003014319.1 KEGG: gbm:Gbem_1922 regulator of chromosome condensation RCC1 YP_003014320.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: ngk:NGK_1315 MerR-family transcriptional regulator YP_003014321.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein YP_003014322.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferaseI; KEGG: ppd:Ppro_0093 glucosamine--fructose-6-phosphate aminotransferase, isomerizing YP_003014323.1 KEGG: baa:BA_0738 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_003014324.1 PFAM: YbbR family protein; KEGG: bsu:BSU01760 hypothetical protein YP_003014325.1 PFAM: protein of unknown function DUF147; KEGG: bha:BH0265 hypothetical protein YP_003014326.1 KEGG: bsu:BSU01740 hypothetical protein YP_003014327.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: this protein is involved in detoxification and protection against antimicrobial YP_003014328.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: baa:BA_0139 hypothetical protein YP_003014329.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: lip:LI0346 trypsin domain/PDZ domain-containing protein YP_003014330.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: dar:Daro_1759 phosphoenolpyruvate carboxylase YP_003014331.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU33290 ferrichrome ABC transporter ATP-binding protein YP_003014332.1 PFAM: nitroreductase; KEGG: bsu:BSU38110 FMN-containing NADPH-linked nitro/flavin reductase YP_003014333.1 KEGG: bha:BH0244 hypothetical protein YP_003014334.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: sde:Sde_0410 hypothetical protein YP_003014335.1 TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase; KEGG: bha:BH0243 hypothetical protein YP_003014336.1 KEGG: bar:GBAA0149 KinB signaling pathway activation protein YP_003014337.1 KEGG: bha:BH0241 spore germination protein YP_003014338.1 KEGG: bha:BH0240 ATP-binding Mrp/Nbp35 family protein YP_003014339.1 KEGG: bha:BH0239 germination specific N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_003014340.1 KEGG: bha:BH1486 3'-phosphoadenosine 5'-phosphosulfate reductase; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase YP_003014341.1 PFAM: ribosomal protein S9; KEGG: bha:BH0169 30S ribosomal protein S9 YP_003014342.1 TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: bha:BH0168 50S ribosomal protein L13 YP_003014343.1 KEGG: bha:BH0167 tRNA pseudouridine synthase A (pseudouridylate synthase I); TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase YP_003014344.1 TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: bha:BH0163 50S ribosomal protein L17 YP_003014345.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_003014346.1 PFAM: ribosomal protein S11; KEGG: bha:BH0161 30S ribosomal protein S11 YP_003014347.1 PFAM: ribosomal protein S13; KEGG: bsu:BSU01410 30S ribosomal protein S13 YP_003014348.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_003014349.1 TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: bha:BH0158 translation initiation factor IF-1 YP_003014350.1 KEGG: bha:BH0157 hypothetical protein YP_003014351.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_003014352.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: bsu:BSU01370 adenylate kinase YP_003014353.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: bha:BH0154 preprotein translocase subunit SecY YP_003014354.1 TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: bha:BH0153 50S ribosomal protein L15 YP_003014355.1 TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: bsu:BSU01340 50S ribosomal protein L30 YP_003014356.1 TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 ; ribosomal protein S5 domain protein; KEGG: bha:BH0151 30S ribosomal protein S5 YP_003014357.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: bsu:BSU01320 50S ribosomal protein L18 YP_003014358.1 PFAM: ribosomal protein L6; KEGG: bha:BH0149 50S ribosomal protein L6 YP_003014359.1 PFAM: ribosomal protein S8; KEGG: baa:BA_0707 ribosomal protein S8 YP_003014360.1 PFAM: ribosomal protein S14; KEGG: bsu:BSU01290 30S ribosomal protein S14 YP_003014361.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_003014362.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_003014363.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: bha:BH0144 50S ribosomal protein L14 YP_003014364.1 PFAM: ribosomal protein S17; KEGG: bsu:BSU01250 30S ribosomal protein S17 YP_003014365.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: bha:BH0142 50S ribosomal protein L29 YP_003014366.1 TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L16; KEGG: bsu:BSU01230 50S ribosomal protein L16 YP_003014367.1 KEGG: bha:BH0140 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein YP_003014368.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: bha:BH0139 50S ribosomal protein L22 YP_003014369.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: bha:BH0138 30S ribosomal protein S19 YP_003014370.1 TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: bha:BH0137 50S ribosomal protein L2 YP_003014371.1 PFAM: ribosomal protein L25/L23; KEGG: bha:BH0136 50S ribosomal protein L23 YP_003014372.1 PFAM: ribosomal protein L4/L1e; KEGG: bha:BH0135 50S ribosomal protein L4 YP_003014373.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_003014374.1 TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: bsu:BSU01150 30S ribosomal protein S10 YP_003014375.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_C1111 ABC transporter ATPase YP_003014376.1 PFAM: inner-membrane translocator; KEGG: dac:Daci_4312 inner-membrane translocator YP_003014377.1 PFAM: protein of unknown function DUF534; KEGG: bmi:BMEA_A2114 hypothetical protein YP_003014378.1 TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: bha:BH0132 elongation factor Tu YP_003014379.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: bar:GBAA0107 elongation factor G YP_003014380.1 TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: bha:BH0130 30S ribosomal protein S7 YP_003014381.1 TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: bar:GBAA0105 30S ribosomal protein S12 YP_003014382.1 KEGG: bha:BH0128 ribosomal protein L7AE family protein YP_003014383.1 KEGG: bha:BH0127 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_003014384.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_003014385.1 PFAM: methyltransferase small; methyltransferase type 11; methyltransferase type 12; KEGG: baa:BA_0688 hypothetical protein YP_003014386.1 TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12; KEGG: bha:BH0122 50S ribosomal protein L7/L12 YP_003014387.1 PFAM: ribosomal protein L10; KEGG: bha:BH0121 50S ribosomal protein L10 YP_003014388.1 TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: bha:BH0120 50S ribosomal protein L1 YP_003014389.1 KEGG: bar:GBAA0097 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11 YP_003014390.1 KEGG: bha:BH0118 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein YP_003014391.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: bha:BH0117 preprotein translocase subunit YP_003014392.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: gur:Gura_1054 50S ribosomal protein L33 YP_003014393.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_003014394.1 PFAM: protein of unknown function DUF901; KEGG: bha:BH0114 hypothetical protein YP_003014395.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: baa:BA_0680 SpoU rRNA methylase family YP_003014396.1 PFAM: ribonuclease III; SMART: ribonuclease III; KEGG: bsu:BSU00950 hypothetical protein YP_003014397.1 TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); KEGG: baa:BA_0678 tRNA synthetases class I (C) YP_003014398.1 TIGRFAM: serine O-acetyltransferase; KEGG: baa:BA_0677 serine O-acetyltransferase YP_003014399.1 KEGG: bsu:BSU00910 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003014400.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: geo:Geob_0560 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_003014401.1 PFAM: PilT protein domain protein; SMART: nucleotide binding protein PINc; KEGG: bsu:BSU00890 hypothetical protein YP_003014403.1 KEGG: baa:BA_1956 CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003014404.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair YP_003014405.1 TIGRFAM: DNA repair protein RadA; SMART: ATPase AAA; KEGG: bha:BH0104 DNA repair protein RadA YP_003014406.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: bar:GBAA4782 heme-degrading monooxygenase IsdG YP_003014407.1 PFAM: ATPase AAA; ATPase AAA central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; KEGG: bha:BH0103 class III stress response-related ATPase YP_003014408.1 PFAM: ATP:guanido phosphotransferase; KEGG: bha:BH0102 ATP:guanido phosphotransferase YP_003014409.1 PFAM: UvrB/UvrC protein; KEGG: bha:BH0101 hypothetical protein YP_003014410.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: baa:BA_0667 transcriptional regulator CtsR YP_003014411.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB YP_003014412.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: bsu:BSU06610 ATP-dependent DNA helicase YP_003014413.1 KEGG: baa:BA_0875 PcrB family; TIGRFAM: geranylgeranylglyceryl phosphate synthase family protein; PFAM: PcrB family protein YP_003014414.1 PFAM: peptidase U32; KEGG: sus:acid_6567 peptidase U32 YP_003014415.1 PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein YP_003014416.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rpi:Rpic_4861 protease Do YP_003014417.1 PFAM: xylose isomerase; AP endonuclease 2 domain protein; KEGG: bha:BH1249 hypothetical protein YP_003014418.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH0677 hypothetical protein YP_003014420.1 TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter related; KEGG: bha:BH3594 excinuclease ABC subunit A YP_003014421.1 KEGG: bha:BH3595 excinuclease ABC subunit B; TIGRFAM: excinuclease ABC subunit B; PFAM: helicase; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_003014422.1 KEGG: bsu:BSU35220 cell division topological determinant YP_003014423.1 KEGG: bsu:BSU35240 hypothetical protein; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; peptidoglycan-binding domain 1 protein; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003014424.1 PFAM: peptidase M23; KEGG: bha:BH3600 cell wall-binding protein YP_003014425.1 PFAM: protein of unknown function DUF214; KEGG: bha:BH3601 cell-division protein YP_003014426.1 KEGG: bsu:BSU35260 cell-division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: ATPase AAA YP_003014427.1 PFAM: van Willebrand factor A; G5 domain protein; KEGG: baa:BA_1185 hypothetical protein YP_003014429.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: bha:BH3186 argininosuccinate lyase YP_003014430.1 KEGG: sat:SYN_02157 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003014431.1 KEGG: bha:BH2894 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_003014432.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: bha:BH2897 acetylornithine aminotransferase YP_003014433.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: bha:BH2898 N-acetylglutamate 5-phosphotransferase YP_003014434.1 KEGG: bha:BH2899 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_003014435.1 KEGG: bsu:BSU11190 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: semialdehyde dehydrogenase NAD - binding; semialdehyde dehydrogenase dimerisation region YP_003014436.1 PFAM: protein of unknown function DUF161; KEGG: bha:BH3604 hypothetical protein YP_003014438.1 TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; helicase; KEGG: bha:BH3606 preprotein translocase subunit SecA YP_003014439.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: baa:BA_0277 ribosomal_S30, Sigma 54 modulation protein / S30EA ribosomal protein YP_003014440.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bha:BH3610 cold-shock protein YP_003014442.1 TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: dps:DP1658 flagellar protein FliS YP_003014443.1 PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: bsu:BSU35340 flagellar capping protein YP_003014444.1 PFAM: flagellar protein FlaG protein; KEGG: bsu:BSU35350 flagellar protein FlaG YP_003014445.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: bsu:BSU38860 UDP-glucose 4-epimerase YP_003014446.1 TIGRFAM: methyltransferase FkbM family; KEGG: noc:Noc_0747 methyltransferase FkbM YP_003014447.1 PFAM: glycosyl transferase group 1; KEGG: bha:BH3380 glycosyl transferase (lipopolysaccharide biosynthesis) YP_003014448.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mlo:mll4701 chloramphenicol acetyltransferase YP_003014449.1 PFAM: glycosyl transferase group 1; KEGG: geo:Geob_0651 glycosyl transferase family 2 YP_003014450.1 PFAM: glycosyl transferase family 2; TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: sat:SYN_02803 glycosyltransferase YP_003014451.1 PFAM: flagellin domain protein; KEGG: tbd:Tbd_1590 flagellin FliC YP_003014452.1 TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; KEGG: bha:BH3617 carbon storage regulator YP_003014453.1 PFAM: protein of unknown function DUF180; KEGG: bsu:BSU35380 flagellar assembly protein FliW YP_003014454.1 KEGG: bsu:BSU35390 hypothetical protein YP_003014455.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: bsu:BSU35400 flagellar hook-associated protein FlgL YP_003014456.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: bha:BH3621 flagellar hook-associated protein FlgK YP_003014457.1 PFAM: FlgN family protein; KEGG: bsu:BSU35420 hypothetical protein YP_003014458.1 PFAM: anti-sigma-28 factor FlgM family protein; KEGG: bsu:BSU35430 anti-sigma factor repressor of sigma-D-dependent transcription YP_003014459.1 KEGG: bha:BH3624 flagellar protein YP_003014460.1 KEGG: sfu:Sfum_3894 phosphoribosyltransferase YP_003014461.1 PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: bar:GBAA5426 ComF operon protein 1 YP_003014463.1 KEGG: pna:Pnap_4375 hypothetical protein YP_003014464.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bha:BH3628 two-component response regulator involved in degradative enzyme YP_003014465.1 KEGG: bsu:BSU35500 two-component sensor histidine kinase; PFAM: Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003014466.1 PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein YP_003014468.1 TIGRFAM: outer membrane protein; PFAM: S-layer domain protein; KEGG: neu:NE0161 hemolysin-type calcium-binding domain-containing protein YP_003014469.1 KEGG: bsu:BSU30550 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003014470.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: baa:BA_1438 SASP, small, acid-soluble spore proteins, alpha/beta type YP_003014471.1 KEGG: hypothetical protein YP_003014472.1 KEGG: bam:Bamb_4575 hemagluttinin domain-containing protein YP_003014473.1 PFAM: S-layer domain protein; KEGG: csa:Csal_0055 hemagglutinin/hemolysin-related protein YP_003014474.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003014475.1 PFAM: glycosyl transferase family 4; KEGG: bsu:BSU35530 teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine) YP_003014476.1 KEGG: bar:GBAA5669 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_003014477.1 PFAM: polysaccharide pyruvyl transferase; KEGG: baa:BA_1468 hypothetical protein YP_003014479.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: baa:BA_0026 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_003014480.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: baa:BA_0355 thioester dehydrase YP_003014481.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tdn:Suden_1233 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003014483.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: bha:BH3737 flagellar hook-basal body protein YP_003014484.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bha:BH3738 flagellar basal-body rod protein YP_003014485.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: bsu:BSU36410 rod shape-determining protein Mbl YP_003014486.1 TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: bha:BH3740 transcriptional regulator of sigma-E- and sigma-K-dependent YP_003014487.1 PFAM: peptidase M23; KEGG: bsu:BSU36550 required for completion of engulfment YP_003014488.1 TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: stage II sporulation D domain protein; KEGG: baa:BA_0382 stage II sporulation protein D YP_003014489.1 PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_2201 protein of unknown function DUF214 YP_003014490.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce7227 ABC transporter ATP-binding protein YP_003014491.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: bcm:Bcenmc03_2554 hypothetical protein YP_003014492.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: bsu:BSU36760 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003014493.1 PFAM: conserved hypothetical protein; KEGG: bha:BH3751 hypothetical protein YP_003014494.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; S-layer domain protein; KEGG: hypothetical protein YP_003014495.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: baa:BA_0386 oxidored_q1, NADH-Ubiquinone/plastoquinone (complex I), various chains YP_003014496.1 Catalyzes the transfer of electrons from NADH to quinone YP_003014497.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_003014498.1 Catalyzes the transfer of electrons from NADH to quinone YP_003014499.1 Catalyzes the transfer of electrons from NADH to quinone YP_003014500.1 Catalyzes the transfer of electrons from NADH to quinone YP_003014501.1 Catalyzes the transfer of electrons from NADH to quinone YP_003014502.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_003014503.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_003014504.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: lhk:LHK_00700 methyl-accepting chemotaxis sensory transducer YP_003014505.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome YP_003014506.1 PFAM: periplasmic binding protein; KEGG: bha:BH1037 iron (III) dicitrate transporter (permease) YP_003014507.1 PFAM: PHP domain protein; KEGG: bsu:BSU36240 hypothetical protein YP_003014508.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_003014509.1 KEGG: baa:BA_0402 ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; SMART: AAA ATPase YP_003014510.1 TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase subunit gamma; KEGG: baa:BA_0403 ATP synthase YP_003014511.1 KEGG: bha:BH3756 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1 subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_003014512.1 TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: baa:BA_0405 ATP synthase delta (OSCP) subunit YP_003014513.1 TIGRFAM: ATP synthase F0 subunit beta; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: bha:BH3758 F0F1 ATP synthase subunit B YP_003014514.1 TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: baa:BA_0407 ATP synthase subunit C YP_003014515.1 TIGRFAM: ATP synthase F0 subunit alpha; PFAM: H+transporting two-sector ATPase subunit alpha; KEGG: bsu:BSU36870 F0F1 ATP synthase subunit A YP_003014516.1 PFAM: ATP synthase I YP_003014518.1 KEGG: bar:GBAA5433 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003014519.1 KEGG: bha:BH3764 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003014520.1 KEGG: bja:blr1357 peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003014521.1 KEGG: baa:BA_1731 oligopeptide transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003014522.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU11450 oligopeptide ABC transporter (permease) YP_003014523.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU11440 oligopeptide ABC transporter (permease) YP_003014524.1 PFAM: extracellular solute-binding protein family 5; KEGG: bsu:BSU11430 oligopeptide ABC transporter (binding protein) YP_003014525.1 PFAM: glycine hydroxymethyltransferase; KEGG: bsu:BSU36900 serine hydroxymethyltransferase YP_003014526.1 PFAM: conserved hypothetical protein; KEGG: bsu:BSU36910 hypothetical protein YP_003014527.1 KEGG: bha:BH3767 ribose-5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase YP_003014528.1 PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: bsu:BSU36930 hypothetical protein YP_003014529.1 PFAM: protein of unknown function DUF204; KEGG: bsu:BSU36940 hypothetical protein YP_003014530.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: bsu:BSU36950 hypothetical protein YP_003014531.1 TIGRFAM: stage II sporulation protein R; KEGG: bsu:BSU36970 required for processing of pro-sigma-E YP_003014532.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: aca:ACP_2650 ribosomal protein L11 methyltransferase YP_003014533.1 TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein; KEGG: bha:BH3775 peptide chain release factor 1 YP_003014534.1 PFAM: nuclear export factor GLE1; KEGG: bsu:BSU03940 hypothetical protein YP_003014535.1 PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: hypothetical protein YP_003014536.1 TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; KEGG: bha:BH4051 GTP-dependent nucleic acid-binding protein EngD YP_003014537.1 PFAM: glycosyl transferase family 2; methyltransferase type 12; methyltransferase type 11; UbiE/COQ5 methyltransferase; KEGG: ppd:Ppro_3336 glycosyl transferase YP_003014540.1 PFAM: S-layer domain protein; propeptide PepSY amd peptidase M4; KEGG: bar:GBAA0898 N-acetylmuramoyl-L-alanine amidase YP_003014541.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU30170 hypothetical protein YP_003014542.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atu:Atu3022 ABC transporter membrane spanning protein (sugar) YP_003014543.1 PFAM: extracellular solute-binding protein family 1; KEGG: atu:Atu3024 ABC transporter transmembrane protein (sugar) YP_003014544.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003014545.1 PFAM: oxidoreductase; oxidoreductase domain; KEGG: mes:Meso_4490 oxidoreductase-like YP_003014546.1 PFAM: xylose isomerase; KEGG: bha:BH3346 hypothetical protein YP_003014547.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cko:CKO_01397 hypothetical protein YP_003014548.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: sun:SUN_0233 thioredoxin YP_003014549.1 PFAM: protein of unknown function UPF0074; KEGG: bar:GBAA3453 rrf2 family protein YP_003014551.1 PFAM: small multidrug resistance protein; KEGG: bha:BH0686 chaperonin YP_003014552.1 PFAM: small multidrug resistance protein; KEGG: bsu:BSU13100 hypothetical protein YP_003014553.1 PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: bha:BH2398 hypothetical protein YP_003014555.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_003014556.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bmn:BMA10247_1187 phosphinothricin acetyltransferase YP_003014557.1 PFAM: RDD domain containing protein; KEGG: bha:BH3357 hypothetical protein YP_003014558.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003014559.1 PFAM: sodium:neurotransmitter symporter; KEGG: psa:PST_0873 sodium-dependent transporter YP_003014561.1 PFAM: glycosyl transferase family 2; KEGG: hypothetical protein YP_003014562.1 PFAM: glycosyl transferase group 1; KEGG: bpy:Bphyt_4319 glycosyl transferase group 1 YP_003014564.1 PFAM: glycosyl transferase family 2; KEGG: rpi:Rpic_4746 glycosyl transferase family 2 YP_003014565.1 PFAM: glycosyl transferase family 2; SMART: hypothetical protein; KEGG: sat:SYN_02803 glycosyltransferase YP_003014566.1 PFAM: glycosyl transferase family 2; SMART: hypothetical protein; KEGG: ade:Adeh_1337 glycosyl transferase family protein YP_003014567.1 KEGG: similar to hCG2041257 YP_003014568.1 KEGG: similar to hCG2041257 YP_003014570.1 KEGG: rpi:Rpic_1857 outer membrane autotransporter barrel domain protein YP_003014571.1 KEGG: GI19348 gene product from transcript GI19348-RA YP_003014572.1 PFAM: glutathione peroxidase; KEGG: bar:GBAA2119 glutathione peroxidase YP_003014574.1 PFAM: protein of unknown function DUF1453; KEGG: sus:acid_4505 hypothetical protein YP_003014575.1 PFAM: aldo/keto reductase; KEGG: scl:sce5048 oxidoreductase YP_003014576.1 PFAM: catalase domain protein; KEGG: bar:GBAA1159 catalase YP_003014577.1 PFAM: transcriptional regulator; KEGG: bha:BH0372 two-component response regulator YP_003014578.1 PFAM: ferric-uptake regulator; KEGG: bsu:BSU08730 FUR family transcriptional regulator YP_003014579.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: bsu:BSU36590 hypothetical protein YP_003014580.1 KEGG: ftn:FTN_0587 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003014581.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: bar:GBAA2400 inosine-uridine preferring nucleoside hydrolase family protein YP_003014582.1 PFAM: protein of unknown function DUF1540; KEGG: bar:GBAA2630 hypothetical protein YP_003014583.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bsu:BSU19620 hypothetical protein YP_003014584.1 PFAM: sulfatase; KEGG: bar:GBAA2947 sulfatase YP_003014585.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003014586.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003014587.1 PFAM: aldo/keto reductase; KEGG: sfu:Sfum_1762 aldo/keto reductase YP_003014588.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bsu:BSU38370 hypothetical protein YP_003014589.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bha:BH0948 bacterioferritin comigratory protein YP_003014590.1 PFAM: asparaginase/glutaminase; KEGG: bar:GBAA3137 L-asparaginase YP_003014591.1 PFAM: fumarylacetoacetate hydrolase; KEGG: dde:Dde_1138 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_003014592.1 PFAM: amidase; KEGG: rpb:RPB_2085 amidase YP_003014593.1 KEGG: bsu:BSU36100 hypothetical protein; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_003014594.1 PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix Mga DNA-binding trans-acting positive regulator; SMART: regulatory protein AsnC/Lrp family; KEGG: bsu:BSU36110 hypothetical protein YP_003014595.1 PFAM: Chromate transporter; KEGG: bsu:BSU36120 hypothetical protein YP_003014596.1 PFAM: Chromate transporter; KEGG: bsu:BSU36130 hypothetical protein YP_003014597.1 PFAM: MMPL domain protein; KEGG: bsu:BSU05650 hypothetical protein YP_003014598.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: baa:BA_1248 HTH_MARR, helix_turn_helix multiple antibiotic resistance protein YP_003014599.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: dvm:DvMF_0260 thioredoxin-disulfide reductase YP_003014600.1 KEGG: mucin-associated surface protein (MASP) YP_003014601.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bsu:BSU31230 methyl-accepting chemotaxis protein YP_003014602.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bsu:BSU09720 hypothetical protein YP_003014603.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: baa:BA_1432 ABC transporter transmembrane protein YP_003014604.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: baa:BA_1966 tetrapyrrole (Corrin/Porphyrin) methylases YP_003014605.1 PFAM: formate/nitrite transporter; KEGG: mpo:Mpop_3185 formate/nitrite transporter YP_003014606.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bsu:BSU03290 assimilatory nitrite reductase (subunit) YP_003014607.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: bsu:BSU03300 assimilatory nitrite reductase (subunit) YP_003014608.1 PFAM: ANTAR domain protein; KEGG: rma:Rmag_0284 response regulator receiver/ANTAR domain-containing protein YP_003014609.1 PFAM: glycosyl transferase, family 3-like; glycosyl transferase family 3; KEGG: tgr:Tgr7_2799 anthranilate phosphoribosyltransferase YP_003014610.1 TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: baa:BA_0764 sugar_tr, sugar (and other) transporter YP_003014611.1 KEGG: bar:GBAA2421 hypothetical protein YP_003014613.1 PFAM: pirin; KEGG: rso:RSc2208 pirin YP_003014615.1 PFAM: hypothetical protein; KEGG: bsu:BSU41040 OxaA-like protein precursor YP_003014617.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: bha:BH2082 hypothetical protein YP_003014618.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU36160 hypothetical protein YP_003014619.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B2107 dihydrodipicolinate synthase family protein YP_003014620.1 KEGG: bsu:BSU12890 hypothetical protein YP_003014621.1 PFAM: aldo/keto reductase; KEGG: rpb:RPB_1288 aldo/keto reductase YP_003014622.1 PFAM: regulatory protein TetR; KEGG: bpt:Bpet3810 TetR family transcriptional regulator YP_003014623.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bsu:BSU35990 hypothetical protein YP_003014624.1 PFAM: DSBA oxidoreductase; KEGG: rec:RHECIAT_CH0002149 dithiol-disulfide isomerase protein (involved in polyketide biosynthesis) YP_003014625.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: smd:Smed_3914 4-oxalocrotonate tautomerase YP_003014626.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bar:GBAA5406 LysR family transcriptional regulator YP_003014627.1 PFAM: conserved hypothetical protein; KEGG: baa:BA_0261 hypothetical protein YP_003014628.1 TIGRFAM: small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: aba:acid345_1223 translation elongation factor 2 (EF-2/EF-G) YP_003014629.1 KEGG: smd:Smed_2312 hypothetical protein YP_003014630.1 KEGG: mmw:Mmwyl1_4082 5'-nucleotidase domain-containing protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-nucleotidase; peptidoglycan-binding LysM; metallophosphoesterase; SMART: peptidoglycan-binding LysM YP_003014631.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: baa:BA_2107 metallopeptidase family M24 YP_003014632.1 KEGG: mgm:Mmc1_1473 conserved hypothetical protein, conserved YP_003014634.1 KEGG: bsu:BSU13530 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003014635.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU33270 hypothetical protein YP_003014636.1 PFAM: protein of unknown function DUF214; KEGG: hypothetical protein YP_003014637.1 KEGG: cff:CFF8240_0758 macrolide-specific efflux protein MacA YP_003014638.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pca:Pcar_0816 ABC-type transporter, ATPase component YP_003014639.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: bar:GBAA3600 acetyltransferase YP_003014640.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: bha:BH3822 hypothetical protein YP_003014642.1 PFAM: RelA/SpoT domain protein; KEGG: bha:BH1885 hypothetical protein YP_003014643.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: aba:acid345_0966 phenazine biosynthesis PhzC/PhzF protein YP_003014644.1 KEGG: bha:BH0082 hypothetical protein YP_003014645.1 PFAM: protein of unknown function DUF1212; KEGG: bha:BH0081 hypothetical protein YP_003014646.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: baa:BA_1733 uncharacterized membrane protein family UPF0013 YP_003014647.1 PFAM: ROK family protein; KEGG: bha:BH1094 transcriptional repressor of the xylose operon YP_003014648.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003014649.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bsu:BSU06950 hypothetical protein YP_003014650.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3682 sugar ABC transporter (permease) YP_003014651.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH3681 sugar ABC transporter (permease) YP_003014652.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3680 sugar ABC transporter (sugar-binding protein) YP_003014653.1 PFAM: polysaccharide deacetylase; KEGG: hch:HCH_05590 xylanase/chitin deacetylase YP_003014654.1 PFAM: NmrA family protein; dihydrodipicolinate reductase; TrkA-N domain protein; KEGG: bsu:BSU09730 hypothetical protein YP_003014655.1 PFAM: glutathione peroxidase; KEGG: hch:HCH_02304 glutathione peroxidase YP_003014656.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dal:Dalk_3666 MarR family transcriptional regulator YP_003014657.1 PFAM: GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: bha:BH3492 GntR family transcriptional regulator YP_003014658.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH3493 ABC transporter ATP-binding protein YP_003014660.1 PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase; KEGG: bha:BH2765 leucine dehydrogenase YP_003014661.1 KEGG: bsu:BSU38920 peptidase T; TIGRFAM: peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_003014662.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: baa:BA_0420 Flavin_Reduct, flavin reductase like domain YP_003014663.1 PFAM: phospholipase/carboxylesterase; KEGG: bar:GBAA3703 phospholipase/carboxylesterase family protein YP_003014664.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bsu:BSU05490 hypothetical protein YP_003014665.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU13670 hypothetical protein YP_003014666.1 PFAM: peptidoglycan-binding protein; KEGG: predicted gene, 100041170 YP_003014667.1 KEGG: cja:CJA_3068 hypothetical protein YP_003014668.1 KEGG: bar:GBAA3603 acetyltransferase YP_003014669.1 KEGG: conserved hypothetical protein YP_003014671.1 KEGG: bha:BH1915 small acid soluble protein YP_003014672.1 PFAM: protein of unknown function DUF1284; KEGG: wpi:WPa_0955 hypothetical protein YP_003014673.1 PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bba:Bd3645 methylated-DNA methyltransferase YP_003014674.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU09010 hypothetical protein YP_003014675.1 PFAM: aldehyde dehydrogenase; KEGG: bsu:BSU37960 hypothetical protein YP_003014676.1 PFAM: YhhN family protein; KEGG: ppu:PP_4118 YhhN family protein YP_003014677.1 TIGRFAM:radical SAM protein; PFAM: radical SAM domain protein; KEGG: bha:BH2506 hypothetical protein YP_003014680.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_003014681.1 TIGRFAM: K+-transporting ATPase subunit beta; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: baa:BA_1325 E1-E2 ATPase YP_003014682.1 KEGG: baa:BA_1326 K+-transporting ATPase, c chain; TIGRFAM: potassium ABC transporter ATPase; PFAM: K transporting ATPase KdpC subunit YP_003014683.1 PFAM: osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: mch:Mchl_0181 osmosensitive K+ channel signal transduction histidine kinase YP_003014684.1 KEGG: mms:mma_1622 hypothetical protein YP_003014685.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: baa:BA_0924 pyridine nucleotide-disulphide oxidoreductase YP_003014686.1 PFAM: periplasmic binding protein; KEGG: bar:GBAA0351 iron compound ABC transporter iron compound-binding protein YP_003014687.1 PFAM: transporter permease; KEGG: bar:GBAA0350 iron compound ABC transporter permease YP_003014688.1 PFAM: transporter permease; KEGG: baa:BA_0920 FecCD transport family YP_003014689.1 proposed role in polysaccahride synthesis YP_003014690.1 PFAM: hypothetical protein; regulatory protein DeoR; KEGG: mxa:MXAN_2553 hypothetical protein YP_003014691.1 KEGG: acr:Acry_0722 major facilitator transporter YP_003014692.1 PFAM: sulfatase; KEGG: bar:GBAA2947 sulfatase YP_003014693.1 PFAM: regulatory protein TetR; KEGG: gur:Gura_0986 TetR family transcriptional regulator YP_003014694.1 KEGG: bar:GBAA2878 hypothetical protein YP_003014695.1 KEGG: bar:GBAA2879 hypothetical protein YP_003014696.1 KEGG: bar:GBAA2880 hypothetical protein YP_003014697.1 KEGG: hypothetical protein YP_003014698.1 PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU07400 hypothetical protein YP_003014699.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: baa:BA_0476 HTH_MERR, helix_turn_helix, mercury resistance YP_003014700.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bar:GBAA3544 quinone oxidoreductase YP_003014701.1 PFAM: GntR family transcriptional regulator; GntR domain protein; SMART: GntR family transcriptional regulator; KEGG: rme:Rmet_1929 GntR family transcriptional regulator YP_003014702.1 TIGRFAM: phosphonate ABC transporter periplasmic phosphonate-binding protein; KEGG: bha:BH0468 phosphonates transporter (phosphate-binding protein) YP_003014703.1 TIGRFAM: phosphonate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0470 phosphonates transporter (permease) YP_003014704.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ppr:PBPRB1946 membrane channel protein YP_003014705.1 KEGG: bha:BH0469 phosphonates transporter; TIGRFAM: phosphonate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003014706.1 KEGG: plu:plu4416 hypothetical protein YP_003014708.1 PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO6511 phosphotransferase family protein YP_003014709.1 PFAM: pentapeptide repeat protein; KEGG: bar:GBAA3425 pentapeptide repeat-containing protein YP_003014710.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_1374 short-chain dehydrogenase/reductase SDR YP_003014711.1 PFAM: regulatory protein TetR; KEGG: geo:Geob_1224 TetR family transcriptional regulator YP_003014712.1 KEGG: mxa:MXAN_1392 hypothetical protein YP_003014713.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mxa:MXAN_1393 HSP90 family protein YP_003014714.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bar:GBAA5104 D-alanyl-D-alanine carboxypeptidase family protein YP_003014715.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bar:GBAA5105 sensor histidine kinase YP_003014716.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA5106 DNA-binding response regulator YP_003014718.1 TIGRFAM: YhgE/Pip N-terminal domain protein; KEGG: bar:GBAA3114 hypothetical protein YP_003014719.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA3115 TetR family transcriptional regulator YP_003014720.1 PFAM: aminoglycoside phosphotransferase; KEGG: bar:GBAA2233 hypothetical protein YP_003014722.1 PFAM: Luciferase-like monooxygenase; KEGG: rlt:Rleg2_2854 luciferase-like monooxygenase YP_003014723.1 PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: bha:BH1577 thiol-disulfide oxidoreductase YP_003014724.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: gsu:GSU1322 cytochrome C biogenesis protein CcdA YP_003014725.1 PFAM: S-layer domain protein; KEGG: hypothetical protein YP_003014726.1 KEGG: GK10816 gene product from transcript GK10816-RA YP_003014727.1 PFAM: sodium:dicarboxylate symporter; KEGG: swp:swp_1386 sodium:dicarboxylate symporter YP_003014728.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpo:Mpop_1539 aminoglycoside phosphotransferase YP_003014729.1 PFAM: fatty acid hydroxylase; KEGG: baa:BA_2149 hypothetical protein YP_003014730.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_3326 major facilitator superfamily MFS_1 YP_003014731.1 KEGG: dac:Daci_3749 hypothetical protein YP_003014732.1 KEGG: bsu:BSU13990 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003014733.1 KEGG: cvi:CV_0964 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003014734.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: atc:AGR_C_1920 hypothetical protein YP_003014735.1 PFAM: regulatory protein TetR; KEGG: bar:GBAA4814 TetR family transcriptional regulator YP_003014736.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003014737.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_4387 LysR family transcriptional regulator YP_003014738.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_1664 EmrB/QacA family drug resistance transporter YP_003014739.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH3911 two-component response regulator YP_003014740.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bar:GBAA5088 sensor histidine kinase YP_003014741.1 PFAM: protein of unknown function DUF214; KEGG: bar:GBAA5084 ABC transporter permease YP_003014742.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bar:GBAA5085 ABC transporter ATP-binding protein YP_003014743.1 PFAM: lipolytic protein G-D-S-L family; KEGG: xcv:XCV1606 acetylhydrolase YP_003014744.1 KEGG: baa:BA_0436 fructose-bisphosphate aldolase class-II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003014745.1 PFAM: heat shock protein 70; KEGG: bar:GBAA3202 chaperone protein HscC YP_003014746.1 PFAM: hypothetical protein; heat shock protein DnaJ domain protein; hypothetical protein; SMART: hypothetical protein; KEGG: rfe:RF_0310 TPR repeat-containing protein YP_003014747.1 TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; PFAM: ABC transporter; KEGG: bar:GBAA1081 hypothetical protein YP_003014748.1 PFAM: S-layer domain protein; KEGG: bar:GBAA2803 S-layer protein YP_003014749.1 PFAM: GntR family transcriptional regulator; GntR domain protein; SMART: GntR family transcriptional regulator; KEGG: rpi:Rpic_0513 GntR family transcriptional regulator YP_003014750.1 PFAM: metallophosphoesterase; KEGG: sus:acid_2404 metallophosphoesterase YP_003014751.1 PFAM: metallophosphoesterase; KEGG: atc:AGR_C_4081 hypothetical protein YP_003014752.1 KEGG: plu:plu4416 hypothetical protein YP_003014753.1 PFAM: extracellular solute-binding protein family 1; KEGG: rlt:Rleg2_1773 extracellular solute-binding protein family 1 YP_003014754.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mca:MCA1942 sugar ABC transporter permease YP_003014755.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cju:C8J_1587 hypothetical protein YP_003014757.1 KEGG: VSP3; extracellular matrix protein YP_003014758.1 KEGG: baa:BA_1471 hypothetical protein YP_003014759.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: baa:BA_1472 hypothetical protein YP_003014761.1 PFAM: NADPH-dependent FMN reductase; KEGG: scl:sce1880 reductase YP_003014762.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU29400 hypothetical protein YP_003014763.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: plu:plu1541 hypothetical protein YP_003014764.1 TIGRFAM: germination protein, Ger(x)C family; KEGG: hypothetical protein YP_003014765.1 PFAM: GerA spore germination protein; KEGG: bar:GBAA_pXO1_0157 spore germination protein XA YP_003014766.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bar:GBAA_pXO1_0156 spore germination protein XB YP_003014768.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: bar:GBAA3725 hypothetical protein YP_003014769.1 PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: baa:BA_2363 catalytic Ligsubunit beta of aromatic ring-opening dioxygenase YP_003014770.1 PFAM: phospholipase/carboxylesterase; KEGG: pfo:Pfl01_2066 phospholipase/carboxylesterase YP_003014771.1 PFAM: cupin; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bar:GBAA4590 DNA-binding protein YP_003014772.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: baa:BA_1596 sugar_tr, sugar (and other) transporter YP_003014773.1 PFAM: periplasmic binding protein; KEGG: bar:GBAA0351 iron compound ABC transporter iron compound-binding protein YP_003014774.1 KEGG: bar:GBAA2700 metal-dependent hydrolase YP_003014775.1 KEGG: sus:acid_2001 phosphoribosylglycinamide formyltransferase protein YP_003014776.1 KEGG: bar:GBAA2716 hypothetical protein YP_003014777.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: smd:Smed_5848 activator of HSP90 ATPase 1 family protein YP_003014778.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003014779.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: mlo:mll3774 hypothetical protein YP_003014780.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: scl:sce8660 MerR family transcriptional regulator YP_003014781.1 PFAM: protein of unknown function DUF214; KEGG: bsu:BSU39630 hypothetical protein YP_003014782.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: shn:Shewana3_0303 short-chain dehydrogenase/reductase SDR YP_003014783.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ppf:Pput_3894 short chain dehydrogenase YP_003014784.1 PFAM: GntR family transcriptional regulator; SMART: GntR family transcriptional regulator; KEGG: abb:ABBFA_002815 bacterial regulatory protein, GntR family protein YP_003014785.1 PFAM: glycosyl transferase group 1; KEGG: spc:Sputcn32_2536 glycosyl transferase, group 1 YP_003014786.1 KEGG: dal:Dalk_4101 hypothetical protein YP_003014787.1 KEGG: bba:Bd0818 hypothetical protein YP_003014788.1 KEGG: dat:HRM2_21170 hypothetical protein YP_003014789.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: baa:BA_1151 REC, CheY-homologous receiver domain YP_003014790.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sensory histidine protein kinase YP_003014791.1 related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase; KEGG: bsu:BSU21390 hypothetical protein YP_003014792.1 PFAM: glycosyl transferase family 2; GtrA family protein; KEGG: sus:acid_0467 glycosyl transferase YP_003014793.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mfa:Mfla_0589 short-chain dehydrogenase/reductase SDR YP_003014794.1 PFAM: AraC-type transcriptional regulator; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003014795.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: baa:BA_0519 REC, CheY-homologous receiver domain YP_003014796.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bja:blr3485 two-component sensor histidine kinase YP_003014797.1 PFAM: extracellular solute-binding protein family 1; KEGG: rlt:Rleg2_5331 extracellular solute-binding protein family 1 YP_003014798.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ret:RHE_PF00316 sugar ABC transporter permease protein YP_003014799.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rlt:Rleg2_5335 binding-protein-dependent transport systems inner membrane component YP_003014800.1 PFAM: glycoside hydrolase family 5; KEGG: hypothetical protein YP_003014801.1 PFAM: transposase IS4 family protein; KEGG: bha:BH1427 transposase (08) YP_003014802.1 PFAM: conserved hypothetical protein; KEGG: bsu:BSU34640 hypothetical protein YP_003014803.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: baa:BA_0154 hypothetical protein YP_003014804.1 PFAM: lipase class 3; KEGG: pmy:Pmen_0272 lipase, class 3 YP_003014805.1 PFAM: chitin-binding domain 3 protein; Fibronectin type III domain protein; carbohydrate-binding family V/XII; SMART: carbohydrate-binding family V/XII; Fibronectin type III domain protein; KEGG: bar:GBAA2793 chitin binding protein YP_003014806.1 PFAM: hypothetical protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bha:BH1889 hypothetical protein YP_003014807.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF1228; KEGG: bsu:BSU02960 hypothetical protein YP_003014808.1 PFAM: beta-lactamase; KEGG: mxa:MXAN_2364 beta-lactamase YP_003014810.1 KEGG: bpt:Bpet2948 hypothetical protein YP_003014811.1 KEGG: aba:acid345_2268 hypothetical protein YP_003014812.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ank:AnaeK_1054 GCN5-related N-acetyltransferase YP_003014813.1 KEGG: cvi:CV_1454 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: hypothetical protein; PAS fold-3 domain protein; chemotaxis sensory transducer; PAS fold domain protein; SMART: PAC repeat-containing protein; chemotaxis sensory transducer YP_003014814.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: mxa:MXAN_0904 transcriptional regulator YP_003014815.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH02628 nucleoside-diphosphate-sugar epimerase dehydratase protein YP_003014816.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: vsa:VSAL_I0803 HTH-type transcriptional regulator CueR (copper export regulator) YP_003014817.1 TIGRFAM: small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor G domain IV; KEGG: sat:SYN_01918 protein translation elongation factor G (EF-G) YP_003014818.1 PFAM: major facilitator superfamily MFS_1; KEGG: dol:Dole_0353 major facilitator transporter YP_003014820.1 PFAM: amidohydrolase; amidohydrolase; KEGG: spq:SPAB_04158 cytosine deaminase YP_003014821.1 TIGRFAM: flavoprotein WrbA; PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: gsu:GSU0804 TrpR binding protein WrbA YP_003014822.1 PFAM: NMT1/THI5 like domain protein; KEGG: scl:sce5512 ABC transporter substrate-binding protein YP_003014823.1 PFAM: amidohydrolase; amidohydrolase; KEGG: pen:PSEEN3598 amidohydrolase YP_003014824.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mxa:MXAN_2832 ABC transporter permease YP_003014825.1 PFAM: FAD linked oxidase; KEGG: rle:pRL120309 FAD-binding dehydrogenase YP_003014826.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kpn:KPN_02040 ABC transporter ATP-binding protein YP_003014827.1 PFAM: creatininase; KEGG: vei:Veis_3147 creatininase YP_003014828.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; GntR family transcriptional regulator; SMART: regulatory protein DeoR; GntR family transcriptional regulator; KEGG: aba:acid345_3908 transcriptional regulator, DeoR family YP_003014829.1 PFAM: transcription activator effector binding; KEGG: bha:BH2119 hypothetical protein YP_003014830.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bar:GBAA1022 DNA-binding protein YP_003014832.1 PFAM: aminoglycoside 3-N-acetyltransferase; KEGG: bar:GBAA2930 aminoglycoside N3-acetyltransferase YP_003014833.1 PFAM: conserved hypothetical protein; KEGG: pau:PA14_60590 hypothetical protein YP_003014834.1 PFAM: NUDIX hydrolase; KEGG: mpo:Mpop_4449 NUDIX hydrolase YP_003014835.1 PFAM: NUDIX hydrolase; KEGG: mmr:Mmar10_0824 NUDIX hydrolase YP_003014836.1 PFAM: NUDIX hydrolase; KEGG: baa:BA_2320 NUDIX, MutT-like domain YP_003014837.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003014838.1 KEGG: sus:acid_2047 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; hypothetical protein; PAS fold domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; ATP-binding region ATPase domain protein YP_003014839.1 KEGG: baa:BA_1563 CheR methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_003014840.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; GAF domain protein; ATP-binding region ATPase domain protein; KEGG: baa:BA_1564 REC, cheY-homologous receiver domain YP_003014841.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: azo:azo1514 hypothetical protein YP_003014842.1 PFAM: protein of unknown function DUF403; KEGG: rce:RC1_1363 hypothetical protein YP_003014843.1 PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: rle:pRL120678 alpha-L-fucosidase YP_003014844.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hypothetical protein YP_003014845.1 KEGG: aba:acid345_0222 hypothetical protein YP_003014846.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU07100 lipoprotein YP_003014847.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hypothetical protein YP_003014848.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, multiple sugar transporter permease YP_003014849.1 PFAM: glycosyl hydrolase family 32; SMART: glycoside hydrolase family 32; KEGG: kpe:KPK_0852 beta-fructofuranosidase YP_003014850.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: sus:acid_0804 xylulokinase YP_003014851.1 PFAM: ROK family protein; KEGG: bha:BH2758 transcriptional repressor of the xylose operon YP_003014852.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_003014854.1 PFAM: helix-turn-helix HxlR type; KEGG: dat:HRM2_14980 transcriptional regulator (MarR family protein) YP_003014855.1 KEGG: bsu:BSU36620 hypothetical protein YP_003014856.1 KEGG: bar:GBAA2415 hypothetical protein YP_003014858.1 PFAM: YCII-related; KEGG: mpt:Mpe_A0137 hypothetical protein YP_003014859.1 PFAM: polysaccharide deacetylase; KEGG: wol:WD0720 polysaccharide deacetylase YP_003014860.1 KEGG: myh10; myosin, heavy polypeptide 10, non-muscle ; K10352 myosin heavy chain YP_003014861.1 PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01640 hypothetical protein YP_003014862.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU39610 hypothetical protein YP_003014864.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: bar:GBAA1032 RNA polymerase factor sigma C YP_003014865.1 KEGG: prp4 ; K08827 pre-mRNA-processing factor 4 YP_003014866.1 PFAM: peptidase C60 sortase A and B; KEGG: sus:acid_5377 sortase family protein YP_003014867.1 PFAM: xylose isomerase; KEGG: yps:YPTB3612 hypothetical protein YP_003014868.1 KEGG: cbc:CbuK_1026 tetratricopeptide repeat family protein YP_003014869.1 PFAM: integral membrane protein TerC; KEGG: bsu:BSU13440 hypothetical protein YP_003014870.1 PFAM: cupin; KEGG: bsu:BSU26560 hypothetical protein YP_003014871.1 PFAM: protein of unknown function DUF1061; KEGG: ban:BA3335 hypothetical protein YP_003014872.1 KEGG: scl:sce8959 monooxygenase YP_003014873.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bsu:BSU08850 aliphatic sulfonate ABC transporter (permease) YP_003014874.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bar:GBAA2920 sulfonate ABC transporter permease protein YP_003014875.1 KEGG: bar:GBAA2921 sulfonate ABC transporter sulfonate-binding protein, TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3 YP_003014876.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU08830 aliphatic sulfonate ABC transporter (binding protein) YP_003014877.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_2373 TetR family transcriptional regulator YP_003014878.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_3058 NAD-dependent epimerase/dehydratase YP_003014879.1 PFAM: helix-turn-helix HxlR type; KEGG: bsu:BSU29030 hypothetical protein YP_003014880.1 PFAM: nitroreductase; KEGG: bsu:BSU05480 hypothetical protein YP_003014881.1 PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: hypothetical protein YP_003014882.1 PFAM: regulatory protein TetR; KEGG: aca:ACP_3098 TetR family transcriptional regulator YP_003014883.1 KEGG: baa:BA_1279 Myosin_tail, myosin tail YP_003014884.1 PFAM: S-layer domain protein; KEGG: S-layer homology domain containing protein YP_003014885.1 PFAM: helix-turn-helix HxlR type; KEGG: abb:ABBFA_003098 HxlR-like helix-turn-helix family protein YP_003014886.1 KEGG: sus:acid_5298 DoxX family protein YP_003014887.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_0526 short chain dehydrogenase YP_003014888.1 PFAM: regulatory protein TetR; KEGG: scl:sce9124 TetR family transcriptional regulator YP_003014889.1 PFAM: aminoglycoside phosphotransferase; KEGG: bar:GBAA3111 aminoglycoside phosphotransferase family protein YP_003014890.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: scl:sce6834 ECF family RNA polymerase sigma factor YP_003014891.1 KEGG: baa:BA_1594 hypothetical protein YP_003014892.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bha:BH3842 two-component response regulator YP_003014893.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: smt:Smal_2681 monosaccharide-transporting ATPase YP_003014894.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cju:C8J_1586 hypothetical protein YP_003014895.1 PFAM: extracellular solute-binding protein family 1; KEGG: bcs:BCAN_B0755 extracellular solute-binding protein YP_003014896.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bha:BH3447 two-component sensor histidine kinase YP_003014897.1 PFAM: dihydrodipicolinate synthetase; KEGG: sme:SM_b20299 N-acetylneuraminate lyase YP_003014898.1 PFAM: extracellular solute-binding protein family 1; KEGG: bmf:BAB2_0491 extracellular solute-binding protein YP_003014899.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cju:C8J_1586 hypothetical protein YP_003014900.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: smt:Smal_2681 monosaccharide-transporting ATPase YP_003014901.1 PFAM: N-acetylmannosamine-6-phosphate epimerase; histidine biosynthesis protein; KEGG: ecq:ECED1_5001 N-acetylmannosamine-6-phosphate 2-epimerase (ManNAc-6-P epimerase) YP_003014902.1 PFAM: ROK family protein; KEGG: baa:BA_0973 ROK family YP_003014903.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ppr:PBPRA2286 RpiR family transcriptional regulatory protein YP_003014904.1 PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_1468 hypothetical protein YP_003014905.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: smd:Smed_0243 regulatory protein LuxR YP_003014906.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: eba:ebA3166 benzyl alcohol dehydrogenase YP_003014907.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA2877 EmrB/QacA family drug resistance transporter YP_003014908.1 PFAM: hypothetical protein; regulatory protein DeoR; KEGG: bsu:BSU19100 hypothetical protein YP_003014909.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ade:Adeh_3160 short-chain dehydrogenase/reductase SDR YP_003014910.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: gme:Gmet_1288 HPrNtr YP_003014911.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: bha:BH3073 PTS system, enzyme I YP_003014912.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: vsa:VSAL_I2814 mannitol-1-phosphate 5-dehydrogenase YP_003014913.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bsu:BSU03980 phosphotransferase system (PTS) mannitol-specific enzyme IICBA component YP_003014914.1 PFAM: hypothetical protein; PRD domain protein; KEGG: bha:BH3853 transcriptional antiterminator YP_003014915.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: ecz:ECS88_4012 fused mannitol-specific PTS enzymes: IIA components ; IIB components ; IIC components YP_003014917.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1710 major facilitator superfamily drug efflux transporter YP_003014918.1 PFAM: regulatory protein TetR; KEGG: msl:Msil_0388 TetR family transcriptional regulator YP_003014919.1 KEGG: nar:Saro_0545 outer membrane autotransporter barrel protein YP_003014921.1 KEGG: pin:Ping_1307 antifreeze protein type I YP_003014922.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: baa:BA_1733 uncharacterized membrane protein family UPF0013 YP_003014923.1 KEGG: bar:GBAA2894 hypothetical protein YP_003014924.1 PFAM: FAD linked oxidase; Berberine/berberine domain protein; KEGG: bsu:BSU08800 hypothetical protein YP_003014925.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: sat:SYN_01581 endonuclease/exonuclease/phosphatase family protein YP_003014926.1 KEGG: bcm:Bcenmc03_1356 diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein YP_003014927.1 PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein YP_003014928.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: hypothetical protein YP_003014929.1 PFAM: histidine kinase internal region; KEGG: hypothetical protein YP_003014930.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein YP_003014931.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0795 sugar transporter (permease) (binding protein dependent transporter) YP_003014932.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bha:BH0794 sugar transporter (permease) (binding protein dependent transporter) YP_003014933.1 PFAM: protein of unknown function DUF163; KEGG: bha:BH4007 rRNA large subunit methyltransferase YP_003014934.1 SMART: ankyrin; KEGG: bar:GBAA4922 ankyrin repeat-containing protein YP_003014936.1 PFAM: protein of unknown function UPF0060; KEGG: bsu:BSU08120 hypothetical protein YP_003014937.1 KEGG: hypothetical protein YP_003014938.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: bha:BH4022 serine protease Do YP_003014940.1 PFAM: beta-lactamase; KEGG: bha:BH4023 hypothetical protein YP_003014941.1 KEGG: bsu:BSU40380 hypothetical protein YP_003014942.1 PFAM: YycH family protein; KEGG: bha:BH4025 hypothetical protein YP_003014943.1 KEGG: bha:BH4026 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003014944.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH4027 two-component response regulator YP_003014945.1 PFAM: peptidase M23; G5 domain protein; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: hypothetical protein YP_003014946.1 KEGG: ech:ECH_0498 VirB6 family type IV secretion system protein YP_003014947.1 KEGG: bsu:BSU40420 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_003014948.1 unwinds double stranded DNA YP_003014949.1 TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9; KEGG: bar:GBAA5718 50S ribosomal protein L9 YP_003014950.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: GGDEF domain containing protein; KEGG: bha:BH4031 hypothetical protein YP_003014951.1 KEGG: bha:BH4032 hypothetical protein YP_003014952.1 PFAM: D-aminoacylase domain protein; Amidohydrolase 3; KEGG: aba:acid345_3040 D-glutamate deacylase YP_003014953.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: bha:BH2710 inosine-5'-monophosphate dehydrogenase YP_003014954.1 PFAM: protein of unknown function UPF0132; KEGG: sus:acid_6361 hypothetical protein YP_003014955.1 PFAM: Domain of unknown function DUF1836; KEGG: bar:GBAA2841 hypothetical protein YP_003014956.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: bsu:BSU09550 hypothetical protein YP_003014957.1 TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; KEGG: baa:BA_1406 Na_H_Exchanger, sodium/hydrogen exchanger family YP_003014958.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bsu:BSU12290 hypothetical protein YP_003014959.1 PFAM: protein of unknown function DUF1641; KEGG: baa:BA_0171 hypothetical protein YP_003014960.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: bsu:BSU40890 30S ribosomal protein S18 YP_003014961.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: bsu:BSU40900 single-strand DNA-binding protein YP_003014962.1 TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: baa:BA_0581 ribosomal protein S6 YP_003014963.1 KEGG: bsu:BSU11260 hypothetical protein YP_003014964.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bar:GBAA3894 hypothetical protein YP_003014965.1 PFAM: protein of unknown function DUF951; KEGG: baa:BA_0583 hypothetical protein YP_003014966.1 PFAM: MscS Mechanosensitive ion channel; KEGG: baa:BA_0584 mechanosensitive ion channel YP_003014967.1 KEGG: pca:Pcar_1728 hypothetical protein YP_003014968.1 TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: bsu:BSU40950 hypothetical protein YP_003014970.1 TIGRFAM: cysteine desulfurase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bha:BH4056 aminotransferase required for NAD biosynthesis (NifS protein) YP_003014971.1 KEGG: baa:BA_0586 ParB-like nuclease domain; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003014972.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bsu:BSU40970 chromosome partitioning protein; transcriptional regulator YP_003014973.1 KEGG: bha:BH4059 DNA-binding protein Spo0J-like-like protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003014974.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: baa:BA_0589 glucose inhibited division protein YP_003014975.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_003014976.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: bha:BH4062 tRNA modification GTPase TrmE YP_003014977.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein YP_003014978.1 PFAM: hypothetical protein; KEGG: bsu:BSU41040 OxaA-like protein precursor YP_003014979.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates YP_003014980.1 TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: bha:BH4066 50S ribosomal protein L34