-- dump date   	20140619_230235
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_003240118.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_003240119.1	KEGG: pjd:Pjdr2_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain
YP_003240120.1	TIGRFAM: S4 domain protein YaaA; PFAM: RNA-binding S4 domain protein; KEGG: pjd:Pjdr2_0003 S4 domain protein YaaA
YP_003240121.1	TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: pjd:Pjdr2_0004 DNA replication and repair protein RecF
YP_003240122.1	KEGG: pjd:Pjdr2_0005 hypothetical protein
YP_003240123.1	KEGG: pjd:Pjdr2_0006 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein
YP_003240124.1	KEGG: pjd:Pjdr2_0007 hypothetical protein
YP_003240125.1	KEGG: pjd:Pjdr2_0008 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A
YP_003240126.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pjd:Pjdr2_0009 metal dependent phosphohydrolase
YP_003240128.1	KEGG: pjd:Pjdr2_0010 hypothetical protein
YP_003240129.1	PFAM: Sigma-G inhibitor, Gin; KEGG: pjd:Pjdr2_0011 sigma-F transcribed protein
YP_003240130.1	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pjd:Pjdr2_0012 Orn/Lys/Arg decarboxylase major region
YP_003240131.1	KEGG: pjd:Pjdr2_0013 thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase
YP_003240132.1	PFAM: protein of unknown function DUF970; KEGG: pjd:Pjdr2_0014 protein of unknown function DUF970
YP_003240133.1	PFAM: protein of unknown function DUF327; KEGG: pjd:Pjdr2_0015 protein of unknown function DUF327
YP_003240134.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: pjd:Pjdr2_0016 DNA polymerase III, delta prime subunit
YP_003240135.1	PFAM: PSP1 domain protein; KEGG: pjd:Pjdr2_0017 PSP1 domain protein
YP_003240136.1	PFAM: protein of unknown function DUF972; KEGG: pjd:Pjdr2_0018 protein of unknown function DUF972
YP_003240137.1	PFAM: methyltransferase small; KEGG: pjd:Pjdr2_0019 methyltransferase small
YP_003240138.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pjd:Pjdr2_0020 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_003240139.1	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: pjd:Pjdr2_0021 transcriptional regulator, AbrB family
YP_003240140.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pjd:Pjdr2_0022 metal dependent phosphohydrolase
YP_003240141.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: pjd:Pjdr2_0023 hydrolase, TatD family
YP_003240142.1	PFAM: 3D domain protein; G5 domain protein; KEGG: pjd:Pjdr2_0024 3D domain protein
YP_003240143.1	KEGG: pjd:Pjdr2_0025 primase/topoisomerase like protein; TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein
YP_003240144.1	KEGG: pjd:Pjdr2_0026 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like
YP_003240145.1	TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG; KEGG: pjd:Pjdr2_0028 sporulation peptidase YabG
YP_003240146.1	PFAM: protein of unknown function DUF1021; KEGG: pjd:Pjdr2_0029 protein of unknown function DUF1021
YP_003240147.1	KEGG: bha:BH0060 small acid-soluble spore protein (minor alpha/beta-type SASP)
YP_003240148.1	TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: pjd:Pjdr2_0031 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_003240149.1	TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase; KEGG: pjd:Pjdr2_0032 purine operon repressor, PurR
YP_003240150.1	PFAM: SpoVG family protein; KEGG: pjd:Pjdr2_0034 SpoVG family protein
YP_003240151.1	TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: pjd:Pjdr2_0035 UDP-N-acetylglucosamine pyrophosphorylase
YP_003240152.1	KEGG: bbe:BBR47_00990 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_003240154.1	KEGG: pjd:Pjdr2_0037 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase
YP_003240155.1	KEGG: pjd:Pjdr2_0038 hypothetical protein
YP_003240156.1	KEGG: pjd:Pjdr2_0039 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein
YP_003240157.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pjd:Pjdr2_0040 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_003240158.1	TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: bbe:BBR47_01050 stage V sporulation protein T
YP_003240159.1	PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: bbe:BBR47_01060 hypothetical protein
YP_003240160.1	TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pjd:Pjdr2_0048 MazG family protein
YP_003240161.1	PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: pjd:Pjdr2_0049 histone family protein DNA-binding protein
YP_003240162.1	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: pjd:Pjdr2_0050 RNA-binding S4 domain protein
YP_003240163.1	TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; KEGG: pjd:Pjdr2_0053 sporulation protein YabP
YP_003240164.1	TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like; KEGG: pjd:Pjdr2_0054 spore cortex biosynthesis protein YabQ
YP_003240165.1	PFAM: Septum formation initiator; KEGG: pjd:Pjdr2_0055 septum formation initiator
YP_003240166.1	PFAM: RNA binding S1 domain protein; KEGG: pjd:Pjdr2_0056 RNA binding S1 domain protein
YP_003240167.1	KEGG: pjd:Pjdr2_0058 stage II sporulation protein E, protein serine/threonine phosphatase; TIGRFAM: stage II sporulation protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein
YP_003240168.1	KEGG: pjd:Pjdr2_0059 hypothetical protein
YP_003240169.1	SMART: serine/threonine protein kinase; KEGG: pjd:Pjdr2_0060 serine/threonine protein kinase
YP_003240170.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Queuosine synthesis-like; KEGG: pjd:Pjdr2_0061 tRNA(Ile)-lysidine synthetase
YP_003240171.1	KEGG: pjd:Pjdr2_0062 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_003240172.1	KEGG: pjd:Pjdr2_0063 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_003240173.1	TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; KEGG: pjd:Pjdr2_0068 quinolinate synthetase complex, A subunit
YP_003240174.1	KEGG: pjd:Pjdr2_0069 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase
YP_003240175.1	KEGG: pjd:Pjdr2_0070 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_003240176.1	TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: pjd:Pjdr2_0071 putative transcriptional acitvator, Baf family
YP_003240177.1	PFAM: Hsp33 protein; KEGG: pjd:Pjdr2_0072 HSP33 protein
YP_003240178.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pjd:Pjdr2_0073 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_003240179.1	TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pjd:Pjdr2_0074 cysteine synthase A
YP_003240180.1	PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: pjd:Pjdr2_0075 anthranilate synthase
YP_003240181.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: pjd:Pjdr2_0076 glutamine amidotransferase of anthranilate synthase
YP_003240182.1	PFAM: aminotransferase class IV; KEGG: pjd:Pjdr2_0077 aminotransferase class IV
YP_003240183.1	KEGG: pjd:Pjdr2_0078 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_003240184.1	KEGG: pjd:Pjdr2_0079 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase
YP_003240185.1	KEGG: pjd:Pjdr2_0080 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_003240186.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pjd:Pjdr2_0081 transcriptional regulator, XRE family
YP_003240187.1	TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: pjd:Pjdr2_0082 TIM-barrel protein, nifR3 family
YP_003240188.1	TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: pjd:Pjdr2_0083 transcription elongation factor GreA
YP_003240190.1	TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: pjd:Pjdr2_0084 lysyl-tRNA synthetase
YP_003240191.1	KEGG: pjd:Pjdr2_0089 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; thiazole biosynthesis family protein; CBS domain containing protein; SMART: CBS domain containing protein
YP_003240192.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: pjd:Pjdr2_0090 serine-type D-Ala-D-Ala carboxypeptidase
YP_003240193.1	with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate
YP_003240194.1	PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: pjd:Pjdr2_0092 SNO glutamine amidotransferase
YP_003240195.1	KEGG: pjd:Pjdr2_0093 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like
YP_003240196.1	KEGG: pjd:Pjdr2_0094 hypothetical protein
YP_003240197.1	KEGG: pjd:Pjdr2_0096 small acid-soluble spore P family protein
YP_003240198.1	KEGG: pjd:Pjdr2_0097 hypothetical protein
YP_003240199.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pjd:Pjdr2_0106 CMP/dCMP deaminase zinc-binding
YP_003240200.1	KEGG: pjd:Pjdr2_5944 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein
YP_003240201.1	PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: pjd:Pjdr2_0109 pseudouridine synthase
YP_003240202.1	PFAM: OmpA/MotB domain protein; KEGG: pjd:Pjdr2_0110 OmpA/MotB domain protein
YP_003240203.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: pjd:Pjdr2_0111 MotA/TolQ/ExbB proton channel
YP_003240204.1	KEGG: pjd:Pjdr2_0112 hypothetical protein
YP_003240205.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: gka:GK1984 pterin-4-alpha-carbinolamine dehydratase (pterin carbinolamine dehydratase)
YP_003240206.1	PFAM: cytochrome c class I; KEGG: afl:Aflv_2560 cytochrome c551
YP_003240207.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_0114 GCN5-related N-acetyltransferase
YP_003240208.1	PFAM: NLP/P60 protein; KEGG: pjd:Pjdr2_0116 NLP/P60 protein
YP_003240209.1	KEGG: pjd:Pjdr2_0117 hypothetical protein
YP_003240210.1	PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: pjd:Pjdr2_0118 peptidase M1 membrane alanine aminopeptidase
YP_003240211.1	KEGG: pjd:Pjdr2_0119 hypothetical protein
YP_003240212.1	PFAM: copper amine oxidase domain protein; KEGG: pjd:Pjdr2_1276 copper amine oxidase domain protein
YP_003240213.1	TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_1130 heavy metal translocating P-type ATPase
YP_003240214.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH4037 cadmium-binding protein (cadmium efflux system accessory protein)
YP_003240215.1	KEGG: bld:BLi03654 YvbI
YP_003240216.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: pjd:Pjdr2_0130 penicillin-binding protein, 1A family
YP_003240217.1	TIGRFAM: spermidine synthase; PFAM: Spermine synthase; KEGG: pjd:Pjdr2_0131 spermidine synthase
YP_003240218.1	TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bcl:ABC3897 agmatinase
YP_003240219.1	PFAM: Activator of Hsp90 ATPase 1 family protein; Polyketide cyclase/dehydrase; KEGG: mxa:MXAN_3391 Aha1 domain-containing protein
YP_003240220.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3686 binding-protein-dependent transport systems inner membrane component
YP_003240221.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2089 ABC transporter permease
YP_003240222.1	KEGG: pjd:Pjdr2_3684 extracellular solute-binding protein family 1
YP_003240223.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bha:BH0487 hypothetical protein
YP_003240224.1	PFAM: glycosyl hydrolase family 88; KEGG: ote:Oter_1360 glycosy hydrolase family protein
YP_003240225.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: ate:Athe_2329 transcriptional regulator, AraC family
YP_003240226.1	KEGG: sus:Acid_0267 hypothetical protein
YP_003240227.1	KEGG: rca:Rcas_2370 oligogalacturonide lyase
YP_003240228.1	PFAM: glycosyl hydrolase family 88; KEGG: ate:Athe_2381 glycosyl hydrolase family 88
YP_003240229.1	KEGG: pjd:Pjdr2_4274 alpha-L-fucosidase
YP_003240230.1	PFAM: beta-lactamase; KEGG: bwe:BcerKBAB4_3017 beta-lactamase
YP_003240231.1	PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pjd:Pjdr2_1285 phosphoesterase PA-phosphatase related
YP_003240232.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: afl:Aflv_1321 predicted amidohydrolase
YP_003240233.1	PFAM: GCN5-related N-acetyltransferase; KEGG: afl:Aflv_1320 acetyltransferase (GNAT) family
YP_003240234.1	KEGG: bbe:BBR47_25630 hypothetical protein
YP_003240235.1	KEGG: dhd:Dhaf_0979 hypothetical protein
YP_003240236.1	PFAM: Domain of unknown function DUF1934; KEGG: pjd:Pjdr2_0133 domain of unknown function DUF1934
YP_003240237.1	KEGG: pjd:Pjdr2_0134 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase
YP_003240238.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pjd:Pjdr2_0135 peptidase S8 and S53 subtilisin kexin sedolisin
YP_003240239.1	PFAM: DNA-directed RNA polymerase delta subunit; KEGG: pjd:Pjdr2_0136 DNA-directed RNA polymerase delta subunit
YP_003240241.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_003240242.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pjd:Pjdr2_0138 response regulator receiver protein
YP_003240243.1	KEGG: esi:Exig_2731 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II
YP_003240244.1	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: pjd:Pjdr2_0139 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_003240245.1	KEGG: pjd:Pjdr2_0140 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: Cold shock protein; AAA ATPase
YP_003240246.1	PFAM: Radical SAM domain protein; KEGG: pjd:Pjdr2_0141 radical SAM domain protein
YP_003240247.1	TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: pjd:Pjdr2_0142 ribosomal protein L31
YP_003240248.1	KEGG: pjd:Pjdr2_0144 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_003240249.1	PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_0145 hypothetical protein
YP_003240250.1	KEGG: pjd:Pjdr2_0146 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein
YP_003240251.1	KEGG: pjd:Pjdr2_0147 hypothetical protein
YP_003240252.1	KEGG: pjd:Pjdr2_0148 hypothetical protein
YP_003240253.1	KEGG: pjd:Pjdr2_0151 putative transcriptional regulator, PucR family
YP_003240254.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pjd:Pjdr2_0152 ABC transporter related
YP_003240255.1	TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain protein; KEGG: pjd:Pjdr2_0155 HPr kinase
YP_003240256.1	TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: pjd:Pjdr2_0156 prolipoprotein diacylglyceryl transferase
YP_003240257.1	KEGG: pjd:Pjdr2_0157 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_003240258.1	KEGG: pjd:Pjdr2_0158 transferase hexapeptide domain-containing protein
YP_003240259.1	PFAM: acyltransferase 3; KEGG: pjd:Pjdr2_5005 acyltransferase 3
YP_003240260.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
YP_003240261.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
YP_003240262.1	KEGG: pjd:Pjdr2_0161 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase
YP_003240263.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_003240264.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_003240265.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_003240266.1	TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: pjd:Pjdr2_0164 imidazoleglycerol phosphate synthase, cyclase subunit
YP_003240267.1	TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: pjd:Pjdr2_0165 phosphoribosyl-ATP diphosphatase
YP_003240268.1	KEGG: pjd:Pjdr2_0166 histidinol phosphate phosphatase HisJ family; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein
YP_003240269.1	KEGG: pjd:Pjdr2_0167 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_003240270.1	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: pjd:Pjdr2_0168 TPR repeat-containing protein
YP_003240271.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pjd:Pjdr2_0784 thioredoxin reductase
YP_003240272.1	PFAM: Coat F domain protein; KEGG: bsu:BSU40530 spore coat protein
YP_003240273.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_25410 hypothetical protein
YP_003240274.1	PFAM: Methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; Methyltransferase type 12; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: dhd:Dhaf_0966 transcriptional regulator, XRE family
YP_003240276.1	KEGG: similar to Ewing sarcoma breakpoint region 1 isoform EWS
YP_003240277.1	PFAM: aminoglycoside phosphotransferase; KEGG: lga:LGAS_1458 aminoglycoside phosphotransferase
YP_003240278.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gtn:GTNG_1578 putative acetyltransferase
YP_003240279.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_18430 hypothetical protein
YP_003240281.1	PFAM: VanZ family protein; KEGG: bcr:BCAH187_A0808 hypothetical protein
YP_003240282.1	KEGG: cce:Ccel_1064 hypothetical protein
YP_003240283.1	KEGG: eat:EAT1b_0972 hypothetical protein
YP_003240284.1	PFAM: NUDIX hydrolase; KEGG: hor:Hore_08300 NUDIX hydrolase
YP_003240285.1	KEGG: dhd:Dhaf_2089 hypothetical protein
YP_003240286.1	KEGG: bcy:Bcer98_1764 hypothetical protein
YP_003240289.1	PFAM: beta-lactamase; KEGG: lsp:Bsph_2747 penicillin-binding protein 4* (PBP 4*) (PBP 4A)
YP_003240290.1	PFAM: response regulator receiver; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bcy:Bcer98_3871 two component LuxR family transcriptional regulator
YP_003240291.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bwe:BcerKBAB4_5151 histidine kinase
YP_003240292.1	PFAM: ABC-2 type transporter; KEGG: bsu:BSU34080 hypothetical protein
YP_003240293.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: btk:BT9727_5037 ABC transporter, ATP-binding protein
YP_003240294.1	TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: pjd:Pjdr2_0170 glucokinase, ROK family
YP_003240295.1	PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_0171 hypothetical protein
YP_003240296.1	PFAM: protein of unknown function UPF0052 and CofD; KEGG: pjd:Pjdr2_0172 protein of unknown function UPF0052 and CofD
YP_003240297.1	PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like; KEGG: pjd:Pjdr2_0173 protein of unknown function DUF199
YP_003240298.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: pjd:Pjdr2_0174 phosphotransferase system, phosphocarrier protein HPr
YP_003240299.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: btl:BALH_1731 multidrug resistance ABC transporter, ATP-binding and permease component
YP_003240300.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: amt:Amet_1518 two component transcriptional regulator
YP_003240301.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bcq:BCQ_1948 sensor histidine kinase
YP_003240302.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lmh:LMHCC_1782 glutamine transport ATP-binding protein GlnQ
YP_003240303.1	KEGG: lmc:Lm4b_00863 glutamine ABC transporter (binding and transport protein); TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor
YP_003240304.1	PFAM: protein of unknown function DUF541; KEGG: amt:Amet_1086 hypothetical protein
YP_003240305.1	KEGG: btk:BT9727_1177 spermidine/putrescine ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_003240306.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_44280 spermidine/putrescine ABC transporter permease protein
YP_003240307.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bwe:BcerKBAB4_1203 ornithine carbamoyltransferase
YP_003240308.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcg:BCG9842_B4004 spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein
YP_003240310.1	KEGG: pth:PTH_2361 hypothetical protein
YP_003240311.1	KEGG: pjd:Pjdr2_0175 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP
YP_003240312.1	PFAM: putative sugar-binding domain protein; KEGG: pjd:Pjdr2_0176 transcriptional regulator, DeoR family
YP_003240313.1	KEGG: pjd:Pjdr2_0177 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_003240314.1	PFAM: phosphoglycerate kinase; KEGG: pjd:Pjdr2_0178 phosphoglycerate kinase
YP_003240315.1	TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: pjd:Pjdr2_0179 triosephosphate isomerase
YP_003240316.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_003240317.1	KEGG: pjd:Pjdr2_0181 enolase; TIGRFAM: enolase; PFAM: enolase
YP_003240318.1	PFAM: S-layer domain protein; KEGG: cth:Cthe_3132 cellulosome enzyme, dockerin type I
YP_003240319.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_1939 putative sensor with HAMP domain
YP_003240320.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1940 two component transcriptional regulator, AraC family
YP_003240321.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1941 extracellular solute-binding protein family 1
YP_003240322.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1942 binding-protein-dependent transport systems inner membrane component
YP_003240323.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1943 binding-protein-dependent transport systems inner membrane component
YP_003240324.1	KEGG: pjd:Pjdr2_1944 hypothetical protein
YP_003240325.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_2030 transcriptional regulator, LysR family
YP_003240326.1	KEGG: pjd:Pjdr2_2031 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase
YP_003240327.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bcl:ABC3704 NADH-dependent flavin oxidoreductase
YP_003240328.1	SMART: regulatory protein ArsR; KEGG: bay:RBAM_036920 hypothetical protein
YP_003240329.1	PFAM: helix-hairpin-helix motif; KEGG: sgr:SGR_1122 hypothetical protein
YP_003240330.1	PFAM: periplasmic binding protein; KEGG: bbe:BBR47_07880 probable ABC transporter substrate binding protein
YP_003240331.1	part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome
YP_003240332.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: avi:Avi_5706 hypothetical protein
YP_003240333.1	PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: hypothetical protein
YP_003240334.1	PFAM: S-layer domain protein; KEGG: drm:Dred_2357 S-layer domain-containing protein
YP_003240335.1	KEGG: slo:Shew_2191 hypothetical protein
YP_003240336.1	KEGG: dsy:DSY0670 hypothetical protein
YP_003240337.1	KEGG: dsy:DSY0671 hypothetical protein
YP_003240338.1	PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dsy:DSY0672 hypothetical protein
YP_003240339.1	PFAM: aminoglycoside phosphotransferase; KEGG: bcz:BCZK1031 trifolitoxin immunity protein
YP_003240340.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: hso:HS_1032 DNA-binding transcriptional repressor PurR
YP_003240341.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efa:EF1232 ABC transporter, permease protein
YP_003240342.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efa:EF1233 ABC transporter, permease protein
YP_003240343.1	KEGG: efa:EF1234 ABC transporter, substrate-binding protein, putative
YP_003240344.1	PFAM: glycoside hydrolase family 30; KEGG: fno:Fnod_0296 glucan endo-1,6-beta-glucosidase
YP_003240345.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH3212 hypothetical protein
YP_003240347.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_003240349.1	PFAM: alpha/beta hydrolase fold; KEGG: lsp:Bsph_3226 prolyl aminopeptidase-like protein
YP_003240350.1	PFAM: ATP-binding region ATPase domain protein; regulatory protein ArsR; SMART: ATP-binding region ATPase domain protein; regulatory protein ArsR; KEGG: drm:Dred_0006 DNA gyrase, B subunit
YP_003240351.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_09710 hypothetical protein
YP_003240352.1	KEGG: bcl:ABC3350 hypothetical protein
YP_003240353.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: lsp:Bsph_1356 DNA-binding protein
YP_003240354.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lsp:Bsph_1357 spermidine/putrescine import ATP-binding protein
YP_003240355.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1358 iron ABC transporter permease
YP_003240356.1	KEGG: lsp:Bsph_1359 ABC transporter, periplasmic binding protein
YP_003240357.1	TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V; KEGG: lsp:Bsph_1360 putative aminotransferase
YP_003240358.1	catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate
YP_003240360.1	PFAM: peptidase S15; KEGG: cce:Ccel_3228 hypothetical protein
YP_003240361.1	KEGG: cpy:Cphy_2146 hypothetical protein
YP_003240362.1	PFAM: peptidase M28; peptidase M20; KEGG: sgr:SGR_2597 M28 family peptidase
YP_003240363.1	PFAM: KNTase domain protein; KEGG: bcl:ABC0267 aminoglycoside nucleotidyltransferase
YP_003240365.1	KEGG: gka:GK1718 hypothetical protein
YP_003240366.1	PFAM: regulatory protein TetR; KEGG: npu:Npun_F1426 TetR family transcriptional regulator
YP_003240367.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: cbe:Cbei_3904 short-chain dehydrogenase/reductase SDR
YP_003240368.1	PFAM: conserved hypothetical protein; KEGG: bli:BL03426 hypothetical protein
YP_003240369.1	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bsu:BSU34650 hypothetical protein
YP_003240370.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: pjd:Pjdr2_0486 electron transfer flavoprotein alpha/beta-subunit
YP_003240371.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bbe:BBR47_16700 electron transfer flavoprotein beta subunit
YP_003240372.1	PFAM: Tetracycline transcriptional regulator YsiA domain protein; regulatory protein TetR; KEGG: aac:Aaci_1592 transcriptional regulator, TetR family
YP_003240373.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: aac:Aaci_1593 protein of unknown function DUF224 cysteine-rich region domain protein
YP_003240374.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: aac:Aaci_1594 3-hydroxyacyl-CoA dehydrogenase NAD-binding
YP_003240375.1	KEGG: aac:Aaci_1595 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_003240376.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pjd:Pjdr2_0491 acyl-CoA dehydrogenase domain protein
YP_003240377.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bbe:BBR47_16670 long-chain-fatty-acid--CoA ligase
YP_003240378.1	PFAM: thioesterase superfamily protein; KEGG: pjd:Pjdr2_0493 thioesterase superfamily protein
YP_003240379.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: pjd:Pjdr2_0182 preprotein translocase, SecG subunit
YP_003240380.1	KEGG: pjd:Pjdr2_0183 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein
YP_003240381.1	TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: pjd:Pjdr2_0185 SsrA-binding protein
YP_003240382.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); peptidase S1 and S6 chymotrypsin/Hap; KEGG: mcl:MCCL_0337 hypothetical protein
YP_003240383.1	KEGG: cyc:PCC7424_5586 ATPase
YP_003240384.1	KEGG: dhd:Dhaf_2031 AAA ATPase
YP_003240385.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bca:BCE_5603 transcriptional regulator-related protein
YP_003240387.1	PFAM: DNA polymerase beta domain protein region; KEGG: bbe:BBR47_37940 hypothetical protein
YP_003240388.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: sth:STH166 hypothetical protein
YP_003240389.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_0716 ABC transporter related
YP_003240390.1	PFAM: ABC-2 type transporter; KEGG: bcy:Bcer98_3873 ABC-2 type transporter
YP_003240391.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bcq:BCQ_5194 sensor histidine kinase
YP_003240392.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bcy:Bcer98_3871 two component LuxR family transcriptional regulator
YP_003240394.1	KEGG: acl:ACL_0515 hypothetical protein
YP_003240395.1	KEGG: xcv:XCV1456 hypothetical protein
YP_003240396.1	PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: cpy:Cphy_1612 pectate lyase/Amb allergen
YP_003240397.1	TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: afl:Aflv_1612 prophage maintenance system killer protein
YP_003240398.1	KEGG: afl:Aflv_1613 SpoVT/AbrB-like cell growth regulatory protein
YP_003240399.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: bcl:ABC3586 two-component sensor histidine kinase
YP_003240400.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: bcl:ABC3587 two-component response regulator
YP_003240401.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC3585 sugar ABC transporter substrate-binding protein
YP_003240402.1	KEGG: cpy:Cphy_3245 hypothetical protein
YP_003240403.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3584 sugar ABC transporter permease
YP_003240404.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3583 sugar ABC transporter permease
YP_003240405.1	PFAM: FAD dependent oxidoreductase; KEGG: tte:TTE2589 hypothetical protein
YP_003240406.1	KEGG: acl:ACL_0515 hypothetical protein
YP_003240407.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: sth:STH166 hypothetical protein
YP_003240408.1	KEGG: bcl:ABC3577 hypothetical protein
YP_003240409.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pjd:Pjdr2_0549 MscS mechanosensitive ion channel
YP_003240410.1	PFAM: glycoside hydrolase family 43; KEGG: pjd:Pjdr2_4201 glycoside hydrolase family 43
YP_003240411.1	TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: gwc:GWCH70_3371 uracil-DNA glycosylase
YP_003240412.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dhd:Dhaf_0497 response regulator receiver and SARP domain protein
YP_003240413.1	PFAM: histidine kinase internal region; response regulator receiver; glycoside hydrolase family 2 sugar binding; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: dsy:DSY0539 hypothetical protein
YP_003240414.1	PFAM: S-layer domain protein; SMART: Fibronectin type III domain protein; KEGG: dsy:DSY3134 hypothetical protein
YP_003240415.1	KEGG: fjo:Fjoh_1960 hypothetical protein
YP_003240416.1	KEGG: fjo:Fjoh_1959 hypothetical protein
YP_003240418.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: fjo:Fjoh_1957 ATPase central domain-containing protein
YP_003240419.1	PFAM: protein of unknown function LppY and LpqO; KEGG: bbe:BBR47_13020 hypothetical protein
YP_003240420.1	PFAM: protein of unknown function LppY and LpqO; KEGG: bbe:BBR47_13010 hypothetical protein
YP_003240421.1	KEGG: pjd:Pjdr2_0095 hypothetical protein
YP_003240422.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_003240423.1	PFAM: type III effector Hrp-dependent outers; KEGG: gtn:GTNG_3231 hypothetical protein
YP_003240424.1	transports degraded pectin products into the bacterial cell
YP_003240425.1	PFAM: Propionate catabolism activator domain protein; helix-turn-helix Fis-type; KEGG: bld:BLi03703 hypothetical protein
YP_003240426.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: pjd:Pjdr2_0228 glycoside hydrolase family 3 domain protein
YP_003240427.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pjd:Pjdr2_0302 cold-shock DNA-binding domain protein
YP_003240428.1	KEGG: pjd:Pjdr2_5921 hypothetical protein
YP_003240430.1	PFAM: heat shock protein Hsp20; KEGG: ckr:CKR_3443 hypothetical protein
YP_003240431.1	PFAM: PspA/IM30 family protein; KEGG: bld:BLi00640 hypothetical protein
YP_003240432.1	KEGG: bsu:BSU06190 hypothetical protein
YP_003240433.1	PFAM: protein of unknown function DUF477; KEGG: bld:BLi00642 YdjH
YP_003240434.1	KEGG: bld:BLi00643 YdjI
YP_003240435.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: csc:Csac_2727 helix-turn-helix domain-containing protein
YP_003240436.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1994 binding-protein-dependent transport systems inner membrane component
YP_003240437.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1995 binding-protein-dependent transport systems inner membrane component
YP_003240438.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1996 extracellular solute-binding protein family 1
YP_003240439.1	KEGG: hmo:HM1_3123 hypothetical protein
YP_003240441.1	PFAM: basic membrane lipoprotein; KEGG: cpr:CPR_1552 membrane lipoprotein TmpC precursor
YP_003240442.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbk:CLL_A2973 galactose/methyl galactoside import ATP-binding protein MglA
YP_003240443.1	PFAM: inner-membrane translocator; KEGG: cpr:CPR_1550 ABC transporter permease
YP_003240444.1	PFAM: inner-membrane translocator; KEGG: cpf:CPF_1829 ABC transporter, permease protein
YP_003240445.1	PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; S-layer domain protein; Endonuclease/exonuclease/phosphatase; KEGG: bbe:BBR47_13210 hypothetical protein
YP_003240446.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: cbe:Cbei_2700 ECF subfamily RNA polymerase sigma-24 factor
YP_003240447.1	KEGG: cbe:Cbei_1735 hypothetical protein
YP_003240448.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1181 transcriptional regulator, AraC family
YP_003240449.1	PFAM: sulfatase; KEGG: pjd:Pjdr2_4151 sulfatase
YP_003240450.1	PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: oih:OB3212 hypothetical protein
YP_003240451.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: gtn:GTNG_2715 catabolite control protein
YP_003240452.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_0677 extracellular solute-binding protein family 1
YP_003240453.1	PFAM: binding-protein-dependent transport systems inner membrane component; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; WD-40 repeat protein; KEGG: cpy:Cphy_1014 binding-protein-dependent transport systems inner membrane component
YP_003240454.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_1015 binding-protein-dependent transport systems inner membrane component
YP_003240455.1	PFAM: alpha-L-rhamnosidase; KEGG: pdi:BDI_1319 glycoside hydrolase family protein
YP_003240456.1	PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: ote:Oter_3716 alpha-L-rhamnosidase
YP_003240457.1	KEGG: bth:BT_3381 hypothetical protein
YP_003240458.1	PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: ote:Oter_3063 alpha-L-rhamnosidase
YP_003240459.1	KEGG: bha:BH3697 alkaline amylopullulanase; TIGRFAM: pullulanase, extracellular; PFAM: pullanase-associated protein; S-layer domain protein; Ig domain protein group 2 domain protein; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Ig domain protein group 2 domain protein
YP_003240460.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pjd:Pjdr2_0287 PHP domain protein
YP_003240461.1	PFAM: cobalt transport protein; KEGG: jde:Jden_0132 cobalt transport protein
YP_003240462.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bfa:Bfae_28820 ATPase component of various ABC-type transport systems with duplicated ATPase domain
YP_003240463.1	KEGG: jde:Jden_0130 hypothetical protein
YP_003240464.1	PFAM: sugar isomerase (SIS); KEGG: pjd:Pjdr2_0288 transcriptional regulator, RpiR family
YP_003240465.1	KEGG: pjd:Pjdr2_5289 hypothetical protein
YP_003240466.1	PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: pjd:Pjdr2_5288 von Willebrand factor type A
YP_003240467.1	PFAM: toxic anion resistance family protein; KEGG: pjd:Pjdr2_5287 toxic anion resistance family protein
YP_003240468.1	PFAM: regulatory protein TetR; KEGG: pjd:Pjdr2_5378 transcriptional regulator, TetR family
YP_003240469.1	PFAM: aminoglycoside phosphotransferase; KEGG: cbb:CLD_3202 hypothetical protein
YP_003240470.1	PFAM: extracellular solute-binding protein family 5; KEGG: gtn:GTNG_1999 ABC transporter peptide-binding protein
YP_003240471.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_1998 ABC transporter (permease)
YP_003240472.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_1997 oligopeptide ABC transporter (permease)
YP_003240473.1	KEGG: gtn:GTNG_1996 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003240474.1	KEGG: bbe:BBR47_20080 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003240475.1	PFAM: OsmC family protein; KEGG: bld:BLi01980 hypothetical protein
YP_003240476.1	PFAM: Protein of unknown function DUF2500; KEGG: pjd:Pjdr2_1194 hypothetical protein
YP_003240477.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bbe:BBR47_27610 hypothetical protein
YP_003240478.1	PFAM: helix-turn-helix HxlR type; KEGG: bbe:BBR47_27620 hypothetical protein
YP_003240479.1	KEGG: pjd:Pjdr2_0445 diguanylate cyclase/phosphodiesterase with MHYT sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein
YP_003240480.1	PFAM: Radical SAM domain protein; KEGG: pjd:Pjdr2_3157 spore photoproduct lyase
YP_003240481.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_5038 transcriptional regulator, GntR family with LacI sensor
YP_003240482.1	PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_5036 hypothetical protein
YP_003240483.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5035 extracellular solute-binding protein family 1
YP_003240484.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5034 binding-protein-dependent transport systems inner membrane component
YP_003240485.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5033 binding-protein-dependent transport systems inner membrane component
YP_003240486.1	PFAM: glycoside hydrolase family 76; KEGG: pjd:Pjdr2_5031 glycoside hydrolase family 76
YP_003240488.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; tyrosine protein kinase; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; serine/threonine protein kinase; KEGG: ana:all2282 serine/threonine kinase protein
YP_003240489.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: amt:Amet_1559 two component LuxR family transcriptional regulator
YP_003240490.1	PFAM: LytTr DNA-binding region; ABC transporter related; KEGG: bha:BH3894 ABC transporter ATP-binding protein
YP_003240491.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcr:BCAH187_A5460 ABC transporter, ATP-binding protein
YP_003240492.1	PFAM: ABC-2 type transporter; KEGG: bcb:BCB4264_A5404 putative ABC transporter, permease protein
YP_003240494.1	PFAM: sodium:neurotransmitter symporter; KEGG: pjd:Pjdr2_5869 sodium:neurotransmitter symporter
YP_003240495.1	PFAM: protein of unknown function DUF896; KEGG: bsu:BSU17880 hypothetical protein
YP_003240496.1	PFAM: glycosyl transferase family 2; KEGG: ssa:SSA_0181 glycosyl transferase family protein
YP_003240498.1	KEGG: vha:VIBHAR_00827 hypothetical protein
YP_003240499.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bld:BLi04371 hypothetical protein
YP_003240500.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pjd:Pjdr2_2930 alkylhydroperoxidase like protein, AhpD family
YP_003240501.1	KEGG: lsp:Bsph_4537 hypothetical protein
YP_003240502.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: lsp:Bsph_4538 hypothetical protein
YP_003240503.1	PFAM: glycoside hydrolase family 3 domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: bha:BH1908 glucan 1,4-beta-glucosidase
YP_003240504.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: pjd:Pjdr2_5250 transcriptional regulator, Crp/Fnr family
YP_003240505.1	PFAM: ApbE family lipoprotein; KEGG: tex:Teth514_0673 ApbE family lipoprotein
YP_003240506.1	PFAM: protein of unknown function DUF1312; KEGG: tpd:Teth39_2118 hypothetical protein
YP_003240507.1	PFAM: Heptaprenyl diphosphate synthase component I; KEGG: amt:Amet_4332 heptaprenyl diphosphate synthase component I
YP_003240508.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0164 ABC transporter ATP-binding protein
YP_003240509.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bwe:BcerKBAB4_0135 cobalt transporter ATP-binding subunit
YP_003240510.1	PFAM: cobalt transport protein; KEGG: gwc:GWCH70_0142 cobalt transport protein
YP_003240511.1	PFAM: MORN repeat-containing protein; SMART: MORN repeat-containing protein; KEGG: bvu:BVU_3326 putative phosphatidylinositol-4-phosphate 5-kinase
YP_003240512.1	KEGG: sth:STH3288 hypothetical protein
YP_003240513.1	PFAM: Polyprenyl synthetase; KEGG: gtn:GTNG_2144 component II of heptaprenyl diphosphate synthase
YP_003240515.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: cce:Ccel_1112 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003240516.1	KEGG: dhd:Dhaf_1503 hypothetical protein
YP_003240517.1	TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase; KEGG: cdf:CD0186 dihydroorotate dehydrogenase 1B
YP_003240518.1	PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: cdf:CD0185 dihydroorotate dehydrogenase electron transfer subunit
YP_003240519.1	PFAM: transcriptional regulator PadR family protein; KEGG: dae:Dtox_2175 transcriptional regulator, PadR-like family
YP_003240520.1	KEGG: lmh:LMHCC_2218 hypothetical protein
YP_003240521.1	KEGG: dae:Dtox_2174 cell division membrane protein-like protein
YP_003240522.1	KEGG: bha:BH0027 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003240523.1	KEGG: bha:BH0028 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003240524.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0029 oligopeptide ABC transporter (permease)
YP_003240525.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0030 oligopeptide ABC transporter (permease)
YP_003240526.1	PFAM: extracellular solute-binding protein family 5; KEGG: bha:BH0031 oligopeptide ABC transporter (oligopeptide-binding protein)
YP_003240527.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bwe:BcerKBAB4_2886 transcriptional regulator, TrmB
YP_003240528.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bbe:BBR47_33180 hypothetical protein
YP_003240529.1	PFAM: alpha/beta hydrolase fold; KEGG: sgr:SGR_5146 putative haloacetate dehalogenase
YP_003240530.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bay:RBAM_018580 YofA
YP_003240531.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbe:BBR47_46710 hypothetical protein
YP_003240532.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ypg:YpAngola_A1069 LacI family sugar-binding transcriptional regulator
YP_003240533.1	PFAM: extracellular solute-binding protein family 1; KEGG: eat:EAT1b_2326 extracellular solute-binding protein family 1
YP_003240534.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mcl:MCCL_0354 multiple sugar-binding transport system, permease protein homolog
YP_003240535.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mcl:MCCL_0355 multiple sugar-binding transporter, permease protein homolog
YP_003240536.1	PFAM: YdjC family protein; KEGG: pjd:Pjdr2_2531 YdjC family protein
YP_003240537.1	PFAM: beta-lactamase; KEGG: dfe:Dfer_2861 beta-lactamase
YP_003240538.1	TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: pjd:Pjdr2_5338 delta-1-pyrroline-5-carboxylate dehydrogenase
YP_003240539.1	PFAM: Proline dehydrogenase; KEGG: pjd:Pjdr2_5339 proline dehydrogenase
YP_003240541.1	KEGG: pjd:Pjdr2_5988 hypothetical protein
YP_003240543.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_003240544.1	TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_5991 K+-transporting ATPase, B subunit
YP_003240545.1	KEGG: pjd:Pjdr2_5992 potassium-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit
YP_003240546.1	PFAM: Osmosensitive K channel His kinase sensor; KEGG: pjd:Pjdr2_5993 osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD
YP_003240547.1	TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: pjd:Pjdr2_1887 uridine kinase
YP_003240548.1	KEGG: rca:Rcas_0482 hypothetical protein
YP_003240549.1	PFAM: aldo/keto reductase; KEGG: cmi:CMM_0530 putative oxidoreductase
YP_003240550.1	PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: tde:TDE0520 hypothetical protein
YP_003240551.1	KEGG: lmc:Lm4b_02684 hypothetical protein
YP_003240552.1	KEGG: bmj:BMULJ_06210 hypothetical protein
YP_003240553.1	PFAM: copper amine oxidase domain protein; KEGG: pjd:Pjdr2_0315 copper amine oxidase domain protein
YP_003240554.1	KEGG: bpu:BPUM_3709 anti-SigV factor
YP_003240555.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pjd:Pjdr2_2791 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003240556.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: bbe:BBR47_43790 3-oxoacyl-[acyl-carrier-protein] synthase II
YP_003240557.1	KEGG: pjd:Pjdr2_4961 helix-turn-helix domain protein
YP_003240558.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: pjd:Pjdr2_3242 SNF2-related protein
YP_003240559.1	PFAM: zinc finger SWIM domain protein; KEGG: pjd:Pjdr2_3241 zinc finger SWIM domain protein
YP_003240560.1	KEGG: bwe:BcerKBAB4_1749 hypothetical protein
YP_003240561.1	KEGG: pjd:Pjdr2_3037 hypothetical protein
YP_003240562.1	PFAM: copper amine oxidase domain protein; FG-GAP repeat protein; KEGG: dae:Dtox_2029 hypothetical protein
YP_003240563.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_0665 putative sensor with HAMP domain
YP_003240564.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: cce:Ccel_1228 two component transcriptional regulator, AraC family
YP_003240565.1	PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0126 extracellular solute-binding protein
YP_003240566.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease
YP_003240567.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0776 sugar ABC transporter permease
YP_003240568.1	KEGG: bbe:BBR47_26070 regulatory protein ADA; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain protein; SMART: Helix-turn-helix, AraC domain
YP_003240569.1	PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: bcv:Bcav_4101 major facilitator superfamily MFS_1
YP_003240571.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: bha:BH0711 AraC/XylS family transcriptional regulator
YP_003240572.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_4892 xylose isomerase domain protein TIM barrel
YP_003240573.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_4891 oxidoreductase domain protein
YP_003240574.1	PFAM: glycoside hydrolase family 43; KEGG: ate:Athe_2371 glycoside hydrolase family 43
YP_003240575.1	KEGG: cma:Cmaq_1011 glycoside hydrolase family protein
YP_003240576.1	PFAM: extracellular solute-binding protein family 1; KEGG: art:Arth_1126 extracellular solute-binding protein
YP_003240577.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH00084 sugar ABC transporter, permease protein
YP_003240578.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ara:Arad_4624 sugar ABC transporter
YP_003240579.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_5332 two component transcriptional regulator, AraC family
YP_003240580.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_5331 cache sensor signal transduction histidine kinase
YP_003240581.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_2922 oxidoreductase domain protein
YP_003240582.1	PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_2921 transcriptional regulator, AraC family
YP_003240584.1	PFAM: Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; KEGG: ckr:CKR_1537 hypothetical protein
YP_003240585.1	KEGG: bbe:BBR47_15440 hypothetical protein
YP_003240586.1	PFAM: aminoglycoside phosphotransferase; KEGG: bpu:BPUM_0640 homoserine kinase type II
YP_003240587.1	TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eat:EAT1b_0948 beta-phosphoglucomutase
YP_003240588.1	PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: tex:Teth514_2193 kojibiose phosphorylase
YP_003240589.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bwe:BcerKBAB4_2786 AraC family transcriptional regulator
YP_003240590.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: cbe:Cbei_4458 histidine kinase internal region
YP_003240591.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: ate:Athe_0600 two component transcriptional regulator, AraC family
YP_003240592.1	PFAM: extracellular solute-binding protein family 1; KEGG: tpd:Teth39_1520 extracellular solute-binding protein
YP_003240593.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0800 ABC-type sugar transport systems, permease components
YP_003240594.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tex:Teth514_2199 monosaccharide-transporting ATPase
YP_003240595.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: hau:Haur_3463 glycoside hydrolase family 3 protein
YP_003240596.1	PFAM: Amylo-alpha-16-glucosidase; KEGG: gtn:GTNG_0823 hypothetical protein
YP_003240597.1	KEGG: bwe:BcerKBAB4_1930 hypothetical protein
YP_003240598.1	PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: tpd:Teth39_0534 glycerol-3-phosphate responsive antiterminator, GlpP
YP_003240599.1	PFAM: extracellular solute-binding protein family 1; KEGG: bbe:BBR47_55550 glycerol-3-phosphate-binding periplasmic protein
YP_003240600.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0957 binding-protein-dependent transport systems inner membrane component
YP_003240601.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_55560 sn-glycerol-3-phosphate transport system permease protein
YP_003240602.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bcl:ABC0363 glycerophosphoryl diester phosphodiesterase
YP_003240603.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_6083 drug resistance transporter, EmrB/QacA subfamily
YP_003240604.1	PFAM: regulatory protein TetR; KEGG: pjd:Pjdr2_4431 transcriptional regulator, TetR family
YP_003240605.1	PFAM: copper amine oxidase domain protein; KEGG: bbe:BBR47_03980 protease inhibitor BBRPI precursor
YP_003240606.1	PFAM: protein of unknown function DUF421; KEGG: bld:BLi00270 hypothetical protein
YP_003240607.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_6129 major facilitator superfamily MFS_1
YP_003240608.1	PFAM: YdjC family protein; KEGG: hypothetical protein
YP_003240609.1	KEGG: seg:SG0730 cell envelope integrity inner membrane protein TolA
YP_003240610.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: oih:OB0584 two-component response regulator
YP_003240611.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: oih:OB0585 two-component sensor histidine kinase
YP_003240612.1	TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; KEGG: bha:BH1426 aspartate ammonia-lyase
YP_003240613.1	KEGG: tte:TTE2738 hypothetical protein
YP_003240614.1	KEGG: bha:BH1920 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003240615.1	PFAM: protein of unknown function UPF0066; KEGG: btk:BT9727_2008 hypothetical protein
YP_003240616.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pjd:Pjdr2_5561 activator of HSP90 ATPase 1 family protein
YP_003240617.1	KEGG: gka:GK3253 hypothetical protein
YP_003240619.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: phe:Phep_1690 NAD-dependent epimerase/dehydratase
YP_003240620.1	PFAM: dihydrodipicolinate synthetase; KEGG: phe:Phep_1691 hypothetical protein
YP_003240621.1	KEGG: bbe:BBR47_37090 probable L-serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein
YP_003240622.1	KEGG: bld:BLi01807 SdaAA; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain
YP_003240624.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1484 extracellular solute-binding protein family 1
YP_003240625.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3654 binding-protein-dependent transport systems inner membrane component
YP_003240626.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cai:Caci_3820 binding-protein-dependent transport systems inner membrane component
YP_003240627.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cce:Ccel_0142 transcriptional regulator, AraC family
YP_003240628.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mms:mma_2281 oxidoreductase
YP_003240629.1	PFAM: FAD dependent oxidoreductase; KEGG: bbe:BBR47_39750 hypothetical protein
YP_003240630.1	PFAM: glycoside hydrolase family 8; KEGG: hau:Haur_2431 licheninase
YP_003240631.1	PFAM: glycoside hydrolase family 43; SMART: LamG domain protein jellyroll fold domain protein; KEGG: bha:BH1878 hypothetical protein
YP_003240633.1	PFAM: DoxX family protein; KEGG: pjd:Pjdr2_5280 DoxX family protein
YP_003240634.1	PFAM: nitroreductase; KEGG: pjd:Pjdr2_6191 nitroreductase
YP_003240636.1	KEGG: bcz:BCZK1765 hypothetical protein
YP_003240638.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gwc:GWCH70_1474 polar amino acid ABC transporter, inner membrane subunit
YP_003240639.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gka:GK1978 glutamine ABC transporter (permease)
YP_003240640.1	PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: pjd:Pjdr2_2875 extracellular solute-binding protein family 3
YP_003240641.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK1976 glutamine ABC transporter ATP-binding protein
YP_003240642.1	PFAM: acyltransferase 3; KEGG: pjd:Pjdr2_5003 acyltransferase 3
YP_003240643.1	PFAM: glycoside hydrolase family 5; KEGG: pjd:Pjdr2_5185 glycoside hydrolase family 5
YP_003240644.1	KEGG: bld:BLi00429 hypothetical protein
YP_003240645.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pjd:Pjdr2_0302 cold-shock DNA-binding domain protein
YP_003240646.1	KEGG: pjd:Pjdr2_0303 hypothetical protein
YP_003240649.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2554 binding-protein-dependent transport systems inner membrane component
YP_003240650.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2553 binding-protein-dependent transport systems inner membrane component
YP_003240651.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5439 extracellular solute-binding protein family 1
YP_003240652.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_5438 signal transduction histidine kinase, LytS
YP_003240653.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_5437 two component transcriptional regulator, AraC family
YP_003240654.1	PFAM: Activator of Hsp90 ATPase 1 family protein; Polyketide cyclase/dehydrase; SMART: regulatory protein ArsR; KEGG: ach:Achl_1019 transcriptional regulator, ArsR family
YP_003240655.1	PFAM: NADPH-dependent FMN reductase; KEGG: ava:Ava_2443 NADPH-dependent FMN reductase
YP_003240656.1	PFAM: lipolytic protein G-D-S-L family; KEGG: aca:ACP_0027 GDSL-like lipase/acylhydrolase family protein
YP_003240657.1	PFAM: protein of unknown function DUF1486; KEGG: ana:all4540 hypothetical protein
YP_003240658.1	PFAM: protein of unknown function DUF1486; KEGG: sma:SAV_3997 hypothetical protein
YP_003240661.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_0420 transcriptional regulator, AraC family
YP_003240662.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pjd:Pjdr2_0422 MATE efflux family protein
YP_003240663.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: gtn:GTNG_0449 RNA polymerase ECF-type sigma factor
YP_003240664.1	KEGG: gtn:GTNG_0450 hypothetical protein
YP_003240665.1	KEGG: Dsim_anon-EST:fe1A3; GD21602 gene product from transcript   GD21602-RA
YP_003240666.1	PFAM: Asparaginase/glutaminase; KEGG: pjd:Pjdr2_1070 asparaginase
YP_003240667.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: tex:Teth514_0161 periplasmic binding protein/LacI transcriptional regulator
YP_003240668.1	PFAM: extracellular solute-binding protein family 1; KEGG: bbe:BBR47_47090 probable ABC transporter substrate binding protein
YP_003240669.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_47080 probable ABC transporter permease protein
YP_003240670.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_47070 probable ABC transporter permease protein
YP_003240671.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: aac:Aaci_2462 oxidoreductase domain protein
YP_003240672.1	KEGG: bcv:Bcav_0599 hypothetical protein
YP_003240673.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bcz:BCZK1637 oxidoreductase, streptomycin biosynthesis protein (StrI-related protein)
YP_003240674.1	catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate
YP_003240675.1	PFAM: amidohydrolase; KEGG: bcv:Bcav_3352 N-acetylglucosamine-6-phosphate deacetylase
YP_003240676.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: gwc:GWCH70_0857 peptidase S9 prolyl oligopeptidase active site domain protein
YP_003240677.1	PFAM: nitroreductase; KEGG: pjd:Pjdr2_0855 nitroreductase
YP_003240678.1	KEGG: dol:Dole_1254 hypothetical protein
YP_003240680.1	PFAM: aldo/keto reductase; KEGG: bcx:BCA_0242 oxidoreductase, aldo/keto reductase family
YP_003240681.1	PFAM: transcriptional regulator PadR family protein; KEGG: bwe:BcerKBAB4_3830 PadR-like family transcriptional regulator
YP_003240682.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_12070 putative multidrug resistance protein
YP_003240683.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ara:Arad_4048 hypothetical protein
YP_003240684.1	PFAM: glycosidase PH1107-related; KEGG: pjd:Pjdr2_5412 glycosidase PH1107-related
YP_003240685.1	PFAM: Protein of unknown function DUF1861; KEGG: gtn:GTNG_3203 hypothetical protein
YP_003240686.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cbt:CLH_1549 trehalose-6-phosphate hydrolase
YP_003240687.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5414 binding-protein-dependent transport systems inner membrane component
YP_003240688.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5415 binding-protein-dependent transport systems inner membrane component
YP_003240689.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5416 extracellular solute-binding protein family 1
YP_003240690.1	SMART: regulatory protein LacI; KEGG: pjd:Pjdr2_5417 transcriptional regulator, LacI family
YP_003240691.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: pjd:Pjdr2_5787 glucose-1,6-bisphosphate synthase
YP_003240692.1	PFAM: UvrD/REP helicase; KEGG: pjd:Pjdr2_1267 UvrD/REP helicase
YP_003240695.1	KEGG: bay:RBAM_009750 YhdL
YP_003240696.1	TIGRFAM: RNA polymerase sigma factor, SigM family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bai:BAA_3359 RNA polymerase sigma-70 factor, ECF subfamily
YP_003240697.1	PFAM: Ankyrin; KEGG: hypothetical protein
YP_003240698.1	KEGG: cce:Ccel_2445 hypothetical protein
YP_003240699.1	KEGG: cbe:Cbei_3776 glycosyl transferase family protein
YP_003240700.1	KEGG: pjd:Pjdr2_4522 hypothetical protein
YP_003240701.1	KEGG: gtn:GTNG_1736 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region
YP_003240703.1	KEGG: gka:GK1842 hypothetical protein
YP_003240704.1	TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: pjd:Pjdr2_5323 copper ion binding protein
YP_003240705.1	PFAM: nitroreductase; KEGG: pjd:Pjdr2_5638 nitroreductase
YP_003240706.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4099 transcriptional regulator, AraC family
YP_003240707.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2090 hypothetical protein
YP_003240708.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU30170 hypothetical protein
YP_003240709.1	PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein
YP_003240711.1	PFAM: TatD-related deoxyribonuclease; KEGG: pjd:Pjdr2_3506 TatD-related deoxyribonuclease
YP_003240712.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_3507 ABC transporter related
YP_003240713.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3508 binding-protein-dependent transport systems inner membrane component
YP_003240714.1	PFAM: protein of unknown function DUF77; KEGG: lsp:Bsph_3015 hypothetical protein
YP_003240715.1	PFAM: NMT1/THI5 like domain protein; KEGG: pjd:Pjdr2_3510 NMT1/THI5 like domain protein
YP_003240716.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pjd:Pjdr2_5898 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003240717.1	KEGG: esi:Exig_0360 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003240718.1	PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: eat:EAT1b_1384 diguanylate phosphodiesterase
YP_003240719.1	PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cpi:Cpin_5087 glycoside hydrolase family 65 central catalytic
YP_003240720.1	TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pmo:Pmob_0141 beta-phosphoglucomutase
YP_003240721.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: pjd:Pjdr2_0770 transcriptional regulator, LacI family
YP_003240722.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pjd:Pjdr2_0774 alpha amylase catalytic region
YP_003240723.1	PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: gtn:GTNG_1958 DNA-binding response regulator
YP_003240724.1	PFAM: histidine kinase A domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gtn:GTNG_1959 sensor protein VanS
YP_003240725.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lsp:Bsph_4477 ABC transporter ATP-binding protein
YP_003240726.1	KEGG: bcz:BCZK2404 permease
YP_003240727.1	KEGG: lsp:Bsph_4475 hypothetical protein
YP_003240728.1	KEGG: dfe:Dfer_4493 oxidoreductase domain protein
YP_003240729.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: tex:Teth514_1074 oxidoreductase domain-containing protein
YP_003240730.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3576 transcriptional regulator, AraC family
YP_003240731.1	PFAM: regulatory protein TetR; KEGG: bbe:BBR47_27430 putative transcriptional regulator
YP_003240732.1	PFAM: alpha/beta hydrolase fold; KEGG: bbe:BBR47_27420 putative hydrolase
YP_003240733.1	PFAM: peptidase U32; KEGG: hor:Hore_14790 peptidase U32
YP_003240734.1	PFAM: aminotransferase class-III; KEGG: hor:Hore_14780 4-aminobutyrate aminotransferase
YP_003240735.1	TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: hor:Hore_14810 4-hydroxybenzoate polyprenyltransferase
YP_003240736.1	PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: pjd:Pjdr2_0783 alpha amylase catalytic region
YP_003240737.1	PFAM: protein of unknown function DUF156; KEGG: oih:OB2653 hypothetical protein
YP_003240738.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bld:BLi00777 YfmJ
YP_003240739.1	PFAM: protein of unknown function DUF1453; KEGG: aac:Aaci_0344 protein of unknown function DUF1453
YP_003240740.1	PFAM: regulatory protein TetR; KEGG: pjd:Pjdr2_4902 putative transcriptional regulator, TetR family
YP_003240741.1	PFAM: beta-lactamase domain protein; KEGG: bcu:BCAH820_5114 metallo-beta-lactamase family protein
YP_003240743.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bbe:BBR47_21250 RNA polymerase ECF-type sigma factor
YP_003240744.1	KEGG: pjd:Pjdr2_0154 hypothetical protein
YP_003240747.1	KEGG: gka:GK3403 hypothetical protein
YP_003240748.1	PFAM: copper amine oxidase domain protein; KEGG: dae:Dtox_4298 copper amine oxidase domain protein
YP_003240749.1	PFAM: Domain of unknown function DUF2394; KEGG: pjd:Pjdr2_0347 6-phosphogluconolactonase
YP_003240750.1	TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein; KEGG: bbe:BBR47_41010 putative spore cortex-lytic enzyme precursor
YP_003240751.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4823 sulfate ABC transporter, periplasmic sulfate-binding protein
YP_003240752.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4822 sulfate ABC transporter, inner membrane subunit CysT
YP_003240753.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4821 sulfate ABC transporter, inner membrane subunit CysW
YP_003240754.1	PFAM: Protein of unknown function DUF2292; KEGG: pjd:Pjdr2_4820 hypothetical protein
YP_003240756.1	PFAM: alpha/beta hydrolase fold; KEGG: bfa:Bfae_17930 predicted hydrolase or acyltransferase of alpha/beta superfamily
YP_003240757.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: aoe:Clos_2752 MerR family transcriptional regulator
YP_003240758.1	KEGG: bbe:BBR47_13640 hypothetical protein
YP_003240759.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: pmy:Pmen_0809 3-beta hydroxysteroid dehydrogenase/isomerase
YP_003240760.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: pth:PTH_0657 carbohydrate kinase
YP_003240762.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cac:CAC1423 dehydrogenase
YP_003240763.1	PFAM: VanW family protein; KEGG: bwe:BcerKBAB4_5507 VanW family protein
YP_003240764.1	KEGG: pjd:Pjdr2_0149 FMN reductase; TIGRFAM: FMN reductase; PFAM: NADPH-dependent FMN reductase
YP_003240765.1	KEGG: pjd:Pjdr2_4454 hypothetical protein
YP_003240766.1	SMART: AAA ATPase; KEGG: bca:BCE_4075 hypothetical protein
YP_003240767.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: lxx:Lxx21880 MarR family transcriptional regulator
YP_003240768.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_5468 drug resistance transporter, EmrB/QacA subfamily
YP_003240769.1	PFAM: protein of unknown function DUF817; KEGG: pjd:Pjdr2_0052 protein of unknown function DUF817
YP_003240770.1	KEGG: bha:BH0584 hypothetical protein
YP_003240771.1	PFAM: GCN5-related N-acetyltransferase; Endoribonuclease L-PSP; KEGG: bbe:BBR47_46040 hypothetical protein
YP_003240772.1	PFAM: ribonucleotide reductase; KEGG: eat:EAT1b_0758 ribonucleoside-diphosphate reductase
YP_003240773.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_003240775.1	PFAM: protein of unknown function DUF77; KEGG: bha:BH1437 hypothetical protein
YP_003240777.1	PFAM: PyrBI operon leader peptide; KEGG: rpc:RPC_4896 hypothetical protein
YP_003240778.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_003240779.1	PFAM: YolD-like protein; KEGG: bsu:BSU23700 hypothetical protein
YP_003240781.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ddr:Deide_2p01860 putative bifunctional protein, precursor : N-acetylmuramoyl-L-alanine amidase; muramoylpentapeptide carboxypeptidase
YP_003240783.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: bbe:BBR47_28640 hypothetical protein
YP_003240784.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: bcb:BCB4264_A2607 cupin domain protein
YP_003240786.1	PFAM: Bile acid:sodium symporter; KEGG: bay:RBAM_005730 hypothetical protein
YP_003240789.1	PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: gwc:GWCH70_0180 N-acetylmuramoyl-L-alanine amidase
YP_003240790.1	KEGG: efa:EF2847 hypothetical protein
YP_003240791.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: gvi:glr2719 HlyB/MsbA family ABC transporter
YP_003240792.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: gvi:glr2720 HlyB/MsbA family ABC transporter
YP_003240794.1	KEGG: pjd:Pjdr2_0457 hypothetical protein
YP_003240795.1	KEGG: hau:Haur_2225 hypothetical protein
YP_003240796.1	KEGG: bcl:ABC1618 hypothetical protein
YP_003240798.1	KEGG: sth:STH1877 hypothetical protein
YP_003240799.1	PFAM: ABC transporter related; KEGG: dfe:Dfer_1327 ABC transporter related
YP_003240800.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bha:BH3868 exo-alpha-1,4-glucosidase
YP_003240801.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bay:RBAM_006540 GutB
YP_003240802.1	KEGG: nth:Nther_0258 hypothetical protein
YP_003240803.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: nth:Nther_0257 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003240804.1	PFAM: major facilitator superfamily MFS_1; KEGG: gka:GK2851 hypothetical protein
YP_003240805.1	KEGG: pjd:Pjdr2_1430 hypothetical protein
YP_003240806.1	PFAM: metal-dependent phosphohydrolase HD sub domain; histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region; histidine kinase HAMP region domain protein; KEGG: aac:Aaci_0362 metal dependent phosphohydrolase
YP_003240808.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: pjd:Pjdr2_5153 sec-independent protein translocase, TatC subunit
YP_003240809.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pjd:Pjdr2_5154 transcriptional regulator, MerR family
YP_003240810.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: pjd:Pjdr2_5155 amine oxidase
YP_003240811.1	PFAM: Endoribonuclease L-PSP; KEGG: pjd:Pjdr2_5156 endoribonuclease L-PSP
YP_003240812.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: pjd:Pjdr2_5157 twin-arginine translocation protein, TatA/E family subunit
YP_003240813.1	PFAM: CsbD family protein; KEGG: kpe:KPK_5242 putative stress-response protein
YP_003240815.1	PFAM: major facilitator superfamily MFS_1; KEGG: chl:Chy400_1293 major facilitator superfamily MFS_1
YP_003240816.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: bcy:Bcer98_1528 NAD-dependent epimerase/dehydratase
YP_003240817.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: ere:EUBREC_0709 hypothetical protein
YP_003240818.1	KEGG: afl:Aflv_1214 uncharacterized membrane protein, possible permease
YP_003240819.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_2023 two component transcriptional regulator, AraC family
YP_003240820.1	PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_2022 histidine kinase
YP_003240821.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esi:Exig_0580 binding-protein-dependent transport systems inner membrane component
YP_003240822.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esi:Exig_0581 binding-protein-dependent transport systems inner membrane component
YP_003240823.1	PFAM: extracellular solute-binding protein family 1; KEGG: eat:EAT1b_2326 extracellular solute-binding protein family 1
YP_003240824.1	KEGG: bbe:BBR47_39800 hypothetical protein
YP_003240825.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: rci:LRC70 DNA/RNA helicase
YP_003240826.1	KEGG: kra:Krad_1012 zinc finger SWIM domain protein
YP_003240827.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: gtn:GTNG_1428 carboxypeptidase
YP_003240828.1	KEGG: pjd:Pjdr2_3239 hypothetical protein
YP_003240829.1	KEGG: cth:Cthe_2090 hypothetical protein
YP_003240830.1	PFAM: transcriptional regulator TrmB; KEGG: bbe:BBR47_26930 hypothetical protein
YP_003240832.1	PFAM: metallophosphoesterase; KEGG: aoe:Clos_0823 metallophosphoesterase
YP_003240833.1	PFAM: copper amine oxidase domain protein; NHL repeat containing protein; FecR protein; KEGG: ote:Oter_2265 NHL repeat-containing protein
YP_003240834.1	TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bcy:Bcer98_1302 xanthine phosphoribosyltransferase
YP_003240835.1	TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bwe:BcerKBAB4_1491 uracil-xanthine permease
YP_003240836.1	PFAM: protein of unknown function UPF0132; KEGG: pjd:Pjdr2_6265 protein of unknown function UPF0132
YP_003240837.1	KEGG: gka:GK1520 hypothetical protein
YP_003240838.1	KEGG: pjd:Pjdr2_0462 hypothetical protein
YP_003240839.1	PFAM: beta-lactamase; KEGG: bcg:BCG9842_B2529 beta-lactamase
YP_003240840.1	KEGG: pjd:Pjdr2_0495 hypothetical protein
YP_003240841.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: ckr:CKR_2482 hypothetical protein
YP_003240843.1	TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c class I; KEGG: pjd:Pjdr2_5304 cytochrome c oxidase, subunit II
YP_003240844.1	KEGG: pjd:Pjdr2_5303 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_003240845.1	PFAM: cytochrome c oxidase subunit III; KEGG: pjd:Pjdr2_5302 cytochrome-c oxidase
YP_003240846.1	PFAM: cytochrome C oxidase subunit IV; KEGG: pjd:Pjdr2_5301 cytochrome c oxidase subunit IV
YP_003240847.1	TIGRFAM: cytochrome c oxidase assembly factor CtaG; PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: pjd:Pjdr2_5300 cytochrome c oxidase assembly factor CtaG
YP_003240848.1	PFAM: protein of unknown function DUF420; KEGG: pjd:Pjdr2_5299 protein of unknown function DUF420
YP_003240849.1	KEGG: pjd:Pjdr2_5298 hypothetical protein
YP_003240850.1	PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_5297 transcriptional regulator, GntR family
YP_003240851.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5296 ABC transporter related
YP_003240852.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5295 ABC transporter related
YP_003240853.1	KEGG: pjd:Pjdr2_5294 ABC-2 type transporter
YP_003240854.1	PFAM: GumN family protein; copper amine oxidase domain protein; KEGG: nth:Nther_0272 GumN family protein
YP_003240855.1	PFAM: protein of unknown function DUF81; KEGG: pjd:Pjdr2_2960 protein of unknown function DUF81
YP_003240856.1	PFAM: Carboxylesterase type B; KEGG: pjd:Pjdr2_2959 carboxylesterase type B
YP_003240857.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_2958 transcriptional regulator, LysR family
YP_003240858.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: ate:Athe_2642 transcriptional regulator, AraC family
YP_003240859.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: pol:Bpro_2862 phytanoyl-CoA dioxygenase
YP_003240860.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: tgr:Tgr7_3080 xylose isomerase domain protein TIM barrel
YP_003240861.1	PFAM: Chromate transporter; KEGG: pjd:Pjdr2_0625 chromate transporter
YP_003240862.1	PFAM: Chromate transporter; KEGG: pjd:Pjdr2_0626 chromate transporter
YP_003240863.1	PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: pjd:Pjdr2_5614 sulfatase
YP_003240864.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5622 transcriptional regulator, AraC family
YP_003240865.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_5621 putative sensor with HAMP domain
YP_003240866.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_5620 two component transcriptional regulator, AraC family
YP_003240867.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5619 extracellular solute-binding protein family 1
YP_003240868.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5618 binding-protein-dependent transport systems inner membrane component
YP_003240869.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5617 binding-protein-dependent transport systems inner membrane component
YP_003240870.1	PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: pjd:Pjdr2_5616 alpha-L-arabinofuranosidase domain protein
YP_003240871.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: esi:Exig_1064 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_003240872.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: esi:Exig_0273 hypothetical protein
YP_003240873.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: esi:Exig_0273 hypothetical protein
YP_003240874.1	PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: pjd:Pjdr2_3579 beta-galactosidase
YP_003240875.1	KEGG: stp:Strop_2288 regulatory protein, TetR
YP_003240876.1	PFAM: alpha/beta hydrolase fold; KEGG: amt:Amet_1907 alpha/beta hydrolase fold
YP_003240877.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: pjd:Pjdr2_1875 acyl-CoA dehydrogenase type 2 domain protein
YP_003240878.1	KEGG: oih:OB2462 hypothetical protein
YP_003240879.1	KEGG: chy:CHY_2568 hypothetical protein
YP_003240880.1	PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: aoe:Clos_0665 MerR family transcriptional regulator
YP_003240881.1	KEGG: amt:Amet_1369 hypothetical protein
YP_003240882.1	KEGG: hypothetical protein
YP_003240883.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bbe:BBR47_27380 sodium/amino acid symporter
YP_003240884.1	KEGG: oih:OB1297 hypothetical protein
YP_003240885.1	KEGG: bcu:BCAH820_3205 hypothetical protein
YP_003240886.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: dsy:DSY0852 hypothetical protein
YP_003240887.1	PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: pjd:Pjdr2_5002 malate dehydrogenase (oxaloacetate-decarboxylating)
YP_003240888.1	KEGG: pjd:Pjdr2_4914 hypothetical protein
YP_003240889.1	PFAM: chitin-binding domain 3 protein; Fibronectin type III domain protein; Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII; Fibronectin type III domain protein; KEGG: pjd:Pjdr2_6116 chitin-binding domain 3 protein
YP_003240890.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: lwe:lwe2315 DeoR family transcriptional regulator
YP_003240891.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: cdf:CD3417 ABC transporter, ATP-binding protein
YP_003240892.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_55570 sn-glycerol-3-phosphate transport system permease protein
YP_003240893.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_55560 sn-glycerol-3-phosphate transport system permease protein
YP_003240894.1	PFAM: extracellular solute-binding protein family 1; KEGG: bbe:BBR47_55550 glycerol-3-phosphate-binding periplasmic protein
YP_003240895.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cbl:CLK_2314 glycerophosphoryl diester phosphodiesterase family protein
YP_003240896.1	PFAM: 3-dehydroquinate synthase; KEGG: gtn:GTNG_1788 L-arabinose utilization protein
YP_003240897.1	PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bbe:BBR47_56440 putative methyl-accepting chemotaxis protein
YP_003240898.1	KEGG: bbe:BBR47_56430 putative cyclohexadienyl dehydratase precursor; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3
YP_003240899.1	PFAM: extracellular solute-binding protein family 1; KEGG: cbk:CLL_A0136 sugar ABC transporter substrate-binding protein
YP_003240900.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbt:CLH_0120 ABC-type sugar transport system, permease component
YP_003240901.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3498 sugar ABC transporter permease
YP_003240902.1	PFAM: Carboxylesterase type B; KEGG: bsu:BSU34390 para-nitrobenzyl esterase (intracellular esterase B)
YP_003240903.1	PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; dihydrodipicolinate reductase; KEGG: pjd:Pjdr2_0740 oxidoreductase domain protein
YP_003240904.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_0741 oxidoreductase domain protein
YP_003240905.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bcl:ABC3529 AraC/XylS family transcriptional regulator
YP_003240906.1	KEGG: bha:BH2268 hypothetical protein
YP_003240908.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_003240909.1	PFAM: SNARE associated Golgi protein; KEGG: bbe:BBR47_27080 hypothetical protein
YP_003240910.1	PFAM: protein of unknown function DUF214; KEGG: bbe:BBR47_05460 ABC transporter permease protein
YP_003240911.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bwe:BcerKBAB4_2324 ABC transporter related
YP_003240912.1	PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bwe:BcerKBAB4_2305 histidine kinase
YP_003240913.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bbe:BBR47_05430 two-component response regulator
YP_003240914.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933 family protein; KEGG: pjd:Pjdr2_5461 fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_003240915.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pjd:Pjdr2_5460 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_003240916.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5467 binding-protein-dependent transport systems inner membrane component
YP_003240917.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5466 binding-protein-dependent transport systems inner membrane component
YP_003240918.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933 family protein; KEGG: pjd:Pjdr2_5465 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003240919.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pjd:Pjdr2_5464 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_003240920.1	SMART: extracellular solute-binding protein family 3; KEGG: pjd:Pjdr2_5463 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
YP_003240921.1	PFAM: nitroreductase; KEGG: ppf:Pput_1300 nitroreductase
YP_003240922.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_2043 histidine kinase
YP_003240923.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pth:PTH_0035 response regulator
YP_003240924.1	PFAM: Pirin domain protein; KEGG: bbe:BBR47_03670 hypothetical protein
YP_003240925.1	PFAM: NLP/P60 protein; SH3 type 3 domain protein; protein of unknown function DUF1058; SMART: SH3 domain protein; KEGG: bbe:BBR47_28040 hypothetical protein
YP_003240926.1	PFAM: Protein of unknown function DUF2196; KEGG: btk:BT9727_4273 hypothetical protein
YP_003240927.1	KEGG: aoe:Clos_1802 hypothetical protein
YP_003240928.1	KEGG: pjd:Pjdr2_2820 hypothetical protein
YP_003240929.1	PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: gtn:GTNG_2702 GAF domain-containing protein
YP_003240930.1	KEGG: pab:PAB7338 hypothetical protein
YP_003240931.1	PFAM: peptidase S15; KEGG: cpr:CPR_2298 hypothetical protein
YP_003240932.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC1216 ribosomal-protein-alanine acetyltransferase
YP_003240933.1	PFAM: cobalt transport protein; KEGG: bsu:BSU13210 hypothetical protein
YP_003240934.1	KEGG: bpu:BPUM_3573 ABC transporter ATP-binding protein
YP_003240935.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bfa:Bfae_07630 ATPase component of various ABC-type transport systems with duplicated ATPase domain
YP_003240936.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: lwe:lwe0964 EmrB/QacA family drug resistance transporter
YP_003240937.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_0948 putative sensor with HAMP domain
YP_003240938.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_0819 two component transcriptional regulator, AraC family
YP_003240939.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_0953 extracellular solute-binding protein family 1
YP_003240940.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0949 binding-protein-dependent transport systems inner membrane component
YP_003240941.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0950 binding-protein-dependent transport systems inner membrane component
YP_003240942.1	PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: pjd:Pjdr2_1514 beta-galactosidase
YP_003240943.1	PFAM: glycosyl hydrolase 53 domain protein; KEGG: jde:Jden_2125 arabinogalactan endo-1,4-beta-galactosidase
YP_003240944.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bpu:BPUM_1233 MarR family transcriptional regulator
YP_003240945.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bce:BC2184 ABC-type transporter ATP-binding protein EcsA
YP_003240946.1	PFAM: ABC transporter EcsB; KEGG: dhd:Dhaf_2497 ABC transporter EcsB
YP_003240947.1	PFAM: HI0933 family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; glucose-inhibited division protein A; KEGG: pjd:Pjdr2_5150 HI0933 family protein
YP_003240948.1	KEGG: pjd:Pjdr2_5148 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_003240950.1	PFAM: protein of unknown function DUF1094; KEGG: pjd:Pjdr2_5145 protein of unknown function DUF1094
YP_003240951.1	TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; KEGG: pjd:Pjdr2_5144 NAD+ synthetase
YP_003240952.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: bbe:BBR47_03120 hypothetical protein
YP_003240953.1	TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: pjd:Pjdr2_5143 holo-acyl-carrier-protein synthase
YP_003240954.1	KEGG: pjd:Pjdr2_5140 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop
YP_003240955.1	PFAM: major facilitator superfamily MFS_1; KEGG: bcr:BCAH187_A1795 hypothetical protein
YP_003240956.1	PFAM: Manganese/iron superoxide dismutase-like; KEGG: pjd:Pjdr2_0801 superoxide dismutase
YP_003240957.1	KEGG: pjd:Pjdr2_5780 hypothetical protein
YP_003240958.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_39210 probable ABC transporter ATP binding protein
YP_003240959.1	PFAM: protein of unknown function DUF214; KEGG: swo:Swol_0943 ABC transporter component-like protein
YP_003240960.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: lpp:lpp2991 hypothetical protein
YP_003240961.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_0802 GCN5-related N-acetyltransferase
YP_003240962.1	TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: pjd:Pjdr2_0804 signal peptidase I
YP_003240963.1	KEGG: pjd:Pjdr2_0806 iron-sulfur cluster binding protein; TIGRFAM: iron-sulfur cluster binding protein; methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; domain of unknown function DUF1730; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PBS lyase HEAT domain protein repeat-containing protein; methylguanine DNA methyltransferase ribonuclease domain protein; SMART: PBS lyase HEAT domain protein repeat-containing protein
YP_003240964.1	KEGG: pjd:Pjdr2_0807 hypothetical protein
YP_003240965.1	KEGG: pjd:Pjdr2_0808 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_003240966.1	KEGG: hypothetical protein
YP_003240967.1	KEGG: bwe:BcerKBAB4_0972 hypothetical protein
YP_003240968.1	KEGG: bcx:BCA_1097 hypothetical protein
YP_003240969.1	PFAM: Manganese/iron superoxide dismutase-like; KEGG: gwc:GWCH70_2227 superoxide dismutase
YP_003240970.1	KEGG: pjd:Pjdr2_0809 phospholipase/carboxylesterase
YP_003240971.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: pjd:Pjdr2_0810 transcriptional regulator, IclR family
YP_003240973.1	TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: pjd:Pjdr2_2034 aconitate hydratase 1
YP_003240974.1	KEGG: pjd:Pjdr2_0812 hypothetical protein
YP_003240975.1	KEGG: pjd:Pjdr2_0813 D-alanine/D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp
YP_003240976.1	KEGG: pjd:Pjdr2_0814 hypothetical protein
YP_003240977.1	TIGRFAM: UV-endonuclease UvdE; PFAM: UV-endonuclease UvdE; KEGG: pjd:Pjdr2_0815 UV-endonuclease UvdE
YP_003240978.1	PFAM: inositol monophosphatase; KEGG: pjd:Pjdr2_0817 inositol monophosphatase
YP_003240980.1	KEGG: dhd:Dhaf_4005 hypothetical protein
YP_003240981.1	PFAM: copper amine oxidase domain protein; lipolytic protein G-D-S-L family; KEGG: pjd:Pjdr2_4999 copper amine oxidase domain protein
YP_003240982.1	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: gsu:GSU0844 trk family potassium uptake protein
YP_003240983.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_1333 histidine kinase
YP_003240984.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1334 two component transcriptional regulator, AraC family
YP_003240985.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1335 binding-protein-dependent transport systems inner membrane component
YP_003240986.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1336 binding-protein-dependent transport systems inner membrane component
YP_003240987.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1337 extracellular solute-binding protein family 1
YP_003240988.1	PFAM: Streptomycin adenylyltransferase; KEGG: bld:BLi00217 AadK
YP_003240989.1	converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate
YP_003240990.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: pjd:Pjdr2_0826 cell envelope-related transcriptional attenuator
YP_003240991.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pjd:Pjdr2_0830 peroxiredoxin
YP_003240992.1	PFAM: Pirin domain protein; KEGG: gtn:GTNG_1497 pirin
YP_003240993.1	PFAM: polysaccharide deacetylase; copper amine oxidase domain protein; KEGG: pjd:Pjdr2_0831 polysaccharide deacetylase
YP_003240994.1	PFAM: protein of unknown function DUF1641; KEGG: pjd:Pjdr2_6270 protein of unknown function DUF1641
YP_003240995.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbe:BBR47_18520 NADH dehydrogenase
YP_003240997.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_5331 cache sensor signal transduction histidine kinase
YP_003240998.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: mta:Moth_2113 two component AraC family transcriptional regulator
YP_003240999.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC0685 sugar ABC transporter substrate-binding protein
YP_003241000.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0686 sugar ABC transporter permease
YP_003241001.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0687 sugar ABC transporter permease
YP_003241002.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: cce:Ccel_0147 two component transcriptional regulator, AraC family
YP_003241003.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: cce:Ccel_0148 putative sensor with HAMP domain
YP_003241004.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5317 two component transcriptional regulator, AraC family
YP_003241005.1	KEGG: cce:Ccel_0150 extracellular solute-binding protein family 1
YP_003241006.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5315 binding-protein-dependent transport systems inner membrane component
YP_003241007.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_0152 binding-protein-dependent transport systems inner membrane component
YP_003241008.1	KEGG: ote:Oter_1101 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; S-layer domain protein; Carbohydrate-binding family 9; SMART: glycoside hydrolase family 10
YP_003241009.1	PFAM: ATPase associated with various cellular activities AAA_3; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; KEGG: bha:BH0604 methanol dehydrogenase regulatory protein
YP_003241010.1	PFAM: protein of unknown function DUF58; KEGG: bbe:BBR47_05290 hypothetical protein
YP_003241011.1	PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pjd:Pjdr2_0834 transglutaminase domain protein
YP_003241012.1	TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; KEGG: pjd:Pjdr2_0836 GMP synthase, large subunit
YP_003241014.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: hmo:HM1_3115 xanthine/uracil permease family protein, putative
YP_003241015.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis
YP_003241016.1	PFAM: extracellular solute-binding protein family 1; KEGG: afl:Aflv_2359 ABC-type sugar transport system, periplasmic component
YP_003241017.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1925 sugar transport system (permease)
YP_003241018.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 sugar transport system (permease)
YP_003241019.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_1458 histidine kinase
YP_003241020.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1455 extracellular solute-binding protein family 1
YP_003241021.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1459 two component transcriptional regulator, AraC family
YP_003241022.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH2175 hypothetical protein
YP_003241023.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: bbe:BBR47_46570 putative transcriptional regulator
YP_003241024.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbe:BBR47_46560 putative dehydrogenase
YP_003241025.1	PFAM: Transglycosylase-associated protein; KEGG: oih:OB2732 hypothetical protein
YP_003241026.1	PFAM: acyl-ACP thioesterase; KEGG: sru:SRU_0057 acyl-ACP thioesterase
YP_003241027.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bwe:BcerKBAB4_2322 two component transcriptional regulator
YP_003241028.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bwe:BcerKBAB4_2305 histidine kinase
YP_003241029.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bwe:BcerKBAB4_2306 ABC transporter related
YP_003241030.1	PFAM: protein of unknown function DUF214; KEGG: bwe:BcerKBAB4_2325 hypothetical protein
YP_003241031.1	PFAM: beta-lactamase domain protein; KEGG: mpo:Mpop_4636 beta-lactamase domain protein
YP_003241032.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: btk:BT9727_0928 NADPH:quinone reductase (quinone oxidoreductase)
YP_003241033.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bbe:BBR47_43620 RNA polymerase ECF-type sigma factor
YP_003241034.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cpf:CPF_0869 acetyltransferase
YP_003241035.1	PFAM: protein of unknown function DUF43; KEGG: bbe:BBR47_11510 hypothetical protein
YP_003241036.1	KEGG: pjd:Pjdr2_4839 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein
YP_003241038.1	PFAM: protein of unknown function DUF1294; KEGG: pjd:Pjdr2_3342 protein of unknown function DUF1294
YP_003241039.1	PFAM: UspA domain protein; KEGG: sis:LS215_0954 UspA domain protein
YP_003241040.1	KEGG: bcg:BCG9842_B1800 hypothetical protein
YP_003241041.1	PFAM: Phosphoglycerate mutase; KEGG: dge:Dgeo_2228 phosphoglycerate mutase
YP_003241042.1	KEGG: pjd:Pjdr2_0860 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_003241043.1	TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; KEGG: pjd:Pjdr2_0861 phosphoribosylaminoimidazole carboxylase, ATPase subunit
YP_003241044.1	TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; KEGG: pjd:Pjdr2_0862 adenylosuccinate lyase
YP_003241045.1	PFAM: SAICAR synthetase; KEGG: pjd:Pjdr2_0863 phosphoribosylaminoimidazolesuccinocarboxamide synthase
YP_003241046.1	TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: pjd:Pjdr2_0864 phosphoribosylformylglycinamidine synthase, PurS
YP_003241047.1	TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: pjd:Pjdr2_0865 phosphoribosylformylglycinamidine synthase I
YP_003241048.1	KEGG: pjd:Pjdr2_0866 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_003241049.1	TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: pjd:Pjdr2_0867 amidophosphoribosyltransferase
YP_003241050.1	KEGG: pjd:Pjdr2_0868 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_003241051.1	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: pjd:Pjdr2_0869 phosphoribosylglycinamide formyltransferase
YP_003241052.1	KEGG: pjd:Pjdr2_0870 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; SMART: AICARFT/IMPCHase bienzyme formylation region
YP_003241053.1	KEGG: pjd:Pjdr2_0871 phosphoribosylamine/glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
YP_003241054.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_0771 extracellular solute-binding protein family 1
YP_003241055.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0772 binding-protein-dependent transport systems inner membrane component
YP_003241056.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0773 binding-protein-dependent transport systems inner membrane component
YP_003241057.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4339 methyl-accepting chemotaxis sensory transducer
YP_003241058.1	PFAM: alpha amylase catalytic region; glycoside hydrolase starch-binding; alpha amylase all-beta; cell surface receptor IPT/TIG domain protein; SMART: alpha amylase catalytic sub domain; alpha amylase all-beta; KEGG: swd:Swoo_3416 alpha amylase catalytic region
YP_003241059.1	PFAM: beta-lactamase; KEGG: sth:STH302 putative beta-lactamase
YP_003241060.1	PFAM: GCN5-related N-acetyltransferase; KEGG: tte:TTE0220 acetyltransferase
YP_003241061.1	PFAM: LmbE family protein; KEGG: tte:TTE0219 hypothetical protein
YP_003241062.1	PFAM: phospholipase/Carboxylesterase; KEGG: pjd:Pjdr2_5973 phospholipase/carboxylesterase
YP_003241063.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4043 binding-protein-dependent transport systems inner membrane component
YP_003241064.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4042 binding-protein-dependent transport systems inner membrane component
YP_003241065.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4041 extracellular solute-binding protein family 1
YP_003241066.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4040 histidine kinase
YP_003241067.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_4039 two component transcriptional regulator, AraC family
YP_003241068.1	KEGG: pjd:Pjdr2_4038 hypothetical protein
YP_003241069.1	PFAM: glycosyl hydrolase family 88; KEGG: pjd:Pjdr2_4037 glycosyl hydrolase family 88
YP_003241070.1	PFAM: Uncharacterised conserved protein UCP014753; KEGG: pjd:Pjdr2_4036 hypothetical protein
YP_003241071.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: par:Psyc_1521 putative NADH-dependent flavin oxidoreductase
YP_003241072.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bha:BH0839 transcriptional regulator
YP_003241073.1	TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain protein; KEGG: gwc:GWCH70_1584 threonine dehydratase
YP_003241074.1	KEGG: dae:Dtox_1722 hypothetical protein
YP_003241075.1	KEGG: gwc:GWCH70_0176 hypothetical protein
YP_003241076.1	PFAM: transcriptional regulator PadR family protein; KEGG: bcb:BCB4264_A4316 transcriptional regulator, PadR family
YP_003241078.1	KEGG: pjd:Pjdr2_0873 PGAP1 family protein
YP_003241079.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: pjd:Pjdr2_6080 extradiol ring-cleavage dioxygenase class III protein subunit B
YP_003241081.1	PFAM: Penicillinase repressor; KEGG: btl:BALH_0957 penicillinase repressor
YP_003241082.1	PFAM: peptidase M56 BlaR1; KEGG: bai:BAA_1167 hypothetical protein
YP_003241083.1	PFAM: DoxX family protein; KEGG: gtn:GTNG_0781 hypothetical protein
YP_003241085.1	PFAM: DoxX family protein; KEGG: gtn:GTNG_0781 hypothetical protein
YP_003241086.1	PFAM: DoxX family protein; KEGG: gtn:GTNG_0781 hypothetical protein
YP_003241088.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU18420 hypothetical protein
YP_003241089.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bld:BLi00992 YogA
YP_003241090.1	KEGG: pjd:Pjdr2_0874 hypothetical protein
YP_003241091.1	PFAM: Putative phosphate transport regulator; KEGG: pjd:Pjdr2_0875 protein of unknown function DUF47
YP_003241092.1	PFAM: phosphate transporter; KEGG: pjd:Pjdr2_0876 phosphate transporter
YP_003241093.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: pjd:Pjdr2_3345 magnesium and cobalt transport protein CorA
YP_003241094.1	KEGG: pin:Ping_1762 hypothetical protein
YP_003241095.1	KEGG: pjd:Pjdr2_0879 hypothetical protein
YP_003241096.1	TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: pjd:Pjdr2_0880 TrpR like protein, YerC/YecD
YP_003241097.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: pjd:Pjdr2_0881 cobalamin (vitamin B12) biosynthesis CbiX protein
YP_003241098.1	PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: pjd:Pjdr2_0882 diacylglycerol kinase catalytic region
YP_003241100.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function Met10; (Uracil-5)-methyltransferase; KEGG: pjd:Pjdr2_0883 RNA methyltransferase, TrmA family
YP_003241101.1	KEGG: hau:Haur_0779 hypothetical protein
YP_003241102.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: npu:Npun_F6051 alcohol dehydrogenase
YP_003241103.1	PFAM: Carbohydrate-binding family V/XII; Lytic transglycosylase catalytic; SMART: Carbohydrate-binding family V/XII; beta and gamma crystallin; KEGG: cbe:Cbei_2831 carbohydrate-binding family V/XII protein
YP_003241104.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_003241105.1	TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gtn:GTNG_1718 gamma subunit of pyruvate oxidoreductase
YP_003241106.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: gtn:GTNG_1717 pyruvate synthase subunit PorA
YP_003241107.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5257 transcriptional regulator, AraC family
YP_003241108.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3161 binding-protein-dependent transport systems inner membrane component
YP_003241109.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3162 binding-protein-dependent transport systems inner membrane component
YP_003241110.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3163 extracellular solute-binding protein family 1
YP_003241111.1	KEGG: pjd:Pjdr2_5235 alpha-L-fucosidase
YP_003241112.1	KEGG: pjd:Pjdr2_4213 hypothetical protein
YP_003241114.1	KEGG: pth:PTH_1215 hypothetical protein
YP_003241115.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: eat:EAT1b_1059 membrane bound O-acyl transferase MBOAT family protein
YP_003241116.1	PFAM: dihydrouridine synthase DuS; KEGG: bay:RBAM_008280 YfjN
YP_003241118.1	KEGG: smu:SMU.1487 hypothetical protein
YP_003241119.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_33130 putative transporter
YP_003241120.1	PFAM: regulatory protein TetR; KEGG: bcl:ABC0634 TetR family transcriptional regulator
YP_003241121.1	SMART: AAA ATPase; KEGG: ere:EUBREC_3049 hypothetical protein
YP_003241122.1	PFAM: regulatory protein TetR; KEGG: bcl:ABC3316 TetR family transcriptional regulator
YP_003241123.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bcl:ABC3315 cytosine permease
YP_003241124.1	PFAM: protein of unknown function DUF917; KEGG: bcl:ABC3314 hypothetical protein
YP_003241125.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: bcl:ABC3313 hydantoinase
YP_003241126.1	KEGG: oih:OB3313 hypothetical protein
YP_003241127.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_09800 ABC transporter ATP-binding protein
YP_003241128.1	PFAM: protein of unknown function DUF214; KEGG: bbe:BBR47_09790 putative ABC transporter permease protein
YP_003241129.1	KEGG: ere:EUBREC_3184 hypothetical protein
YP_003241130.1	PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: bbe:BBR47_15370 hypothetical protein
YP_003241131.1	KEGG: variant erythrocyte surface antigen-1, alpha subunit
YP_003241132.1	KEGG: bcx:BCA_3021 hypothetical protein
YP_003241133.1	KEGG: oih:OB0324 hypothetical protein
YP_003241134.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: gem:GM21_3067 superoxide dismutase
YP_003241136.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4216 binding-protein-dependent transport systems inner membrane component
YP_003241137.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5532 binding-protein-dependent transport systems inner membrane component
YP_003241138.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_5531 putative sensor with HAMP domain
YP_003241139.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5529 extracellular solute-binding protein family 1
YP_003241140.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: bha:BH1123 hypothetical protein
YP_003241141.1	PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; glycoside hydrolase family 67; KEGG: pjd:Pjdr2_1323 alpha-glucuronidase
YP_003241142.1	KEGG: tex:Teth514_1283 hypothetical protein
YP_003241144.1	KEGG: cpy:Cphy_0585 hypothetical protein
YP_003241145.1	KEGG: cpy:Cphy_0586 hypothetical protein
YP_003241146.1	KEGG: cpy:Cphy_0587 hypothetical protein
YP_003241147.1	PFAM: DEAD/DEAH box helicase domain protein; Protein of unknown function DUF1998; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: cpy:Cphy_0588 DEAD/DEAH box helicase domain-containing protein
YP_003241148.1	PFAM: N-6 DNA methylase; KEGG: swo:Swol_0512 type I restriction modification system M subunit (site-specific DNA-methyltransferase subunit)
YP_003241149.1	PFAM: restriction modification system DNA specificity domain; KEGG: mma:MM_3142 type I restriction-modification system specificity subunit
YP_003241150.1	PFAM: type III restriction protein res subunit; protein of unknown function DUF450; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; KEGG: swo:Swol_0516 type I restriction-modification system R subunit (endonuclease)
YP_003241151.1	KEGG: gtn:GTNG_2009 hypothetical protein
YP_003241152.1	SMART: HNH nuclease; KEGG: npu:Npun_R6462 TPR repeat-containing protein
YP_003241153.1	KEGG: amt:Amet_3129 hypothetical protein
YP_003241154.1	PFAM: ATPase associated with various cellular activities AAA_5; KEGG: tex:Teth514_1826 ATPase
YP_003241155.1	PFAM: Domain of unknown function DUF2357; protein of unknown function DUF524; KEGG: tex:Teth514_1825 hypothetical protein
YP_003241156.1	PFAM: NERD domain protein; KEGG: ate:Athe_1607 NERD domain protein
YP_003241158.1	SMART: helix-turn-helix domain protein; KEGG: bbe:BBR47_56100 putative DNA-binding protein
YP_003241159.1	PFAM: protein of unknown function DUF909; KEGG: pjd:Pjdr2_3086 hypothetical protein
YP_003241160.1	KEGG: pjd:Pjdr2_3087 hypothetical protein
YP_003241161.1	KEGG: btk:BT9727_2780 hypothetical protein
YP_003241162.1	KEGG: bbe:BBR47_55850 hypothetical protein
YP_003241163.1	KEGG: sgr:SGR_1015 putative ABC transporter substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_003241164.1	PFAM: Luciferase-like, subgroup; KEGG: rlg:Rleg_1636 alkanesulfonate monooxygenase
YP_003241165.1	KEGG: rer:RER_58610 aliphatic sulfonates ABC transporter substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3
YP_003241166.1	KEGG: sgr:SGR_1016 hypothetical protein
YP_003241167.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gtn:GTNG_2609 ABC transporter ATP-binding protein
YP_003241168.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_2610 putative transport system permease protein of aliphatic sulfonates ABC transporter
YP_003241169.1	PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: bcl:ABC3576 hypothetical protein
YP_003241171.1	KEGG: spw:SPCG_0857 V-type ATP synthase subunit I
YP_003241172.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cbe:Cbei_3453 transcription activator, effector binding
YP_003241173.1	KEGG: dfe:Dfer_1348 hypothetical protein
YP_003241174.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: efa:EF2430 xanthine/uracil permease family protein
YP_003241175.1	KEGG: lsp:Bsph_1757 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase
YP_003241176.1	KEGG: esi:Exig_1284 hypothetical protein
YP_003241177.1	PFAM: protein of unknown function DUF909; KEGG: bcl:ABC1189 transposase
YP_003241178.1	KEGG: bcl:ABC1190 hypothetical protein
YP_003241182.1	KEGG: ere:EUBREC_1345 hypothetical protein
YP_003241183.1	KEGG: hypothetical protein LOC100150481
YP_003241184.1	KEGG: mpe:MYPE2240 hypothetical protein
YP_003241187.1	PFAM: Ig domain protein group 2 domain protein; S-layer domain protein; Ig family protein; GLUG domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: pjd:Pjdr2_5272 S-layer domain protein
YP_003241188.1	PFAM: Bacterio-opsin activator HTH domain protein; KEGG: gvi:glr3133 hypothetical protein
YP_003241189.1	PFAM: protein of unknown function DUF909; KEGG: cac:CAC1442 hypothetical protein
YP_003241190.1	KEGG: lmo:lmo0151 hypothetical protein
YP_003241192.1	KEGG: bbe:BBR47_49270 hypothetical protein
YP_003241193.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: cth:Cthe_1584 two component AraC family transcriptional regulator
YP_003241194.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: cth:Cthe_1585 signal transduction histidine kinase, LytS
YP_003241195.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhy:BHWA1_00871 putative permease BitE
YP_003241196.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: fnu:FN0376 iron(III)-transport ATP-binding protein SfuC
YP_003241197.1	PFAM: extracellular solute-binding protein family 1; KEGG: spn:SP_0243 iron ABC transporter, iron-binding protein
YP_003241198.1	KEGG: bbe:BBR47_27290 hypothetical protein
YP_003241199.1	PFAM: Penicillinase repressor; KEGG: cbe:Cbei_1062 CopY family transcriptional regulator
YP_003241200.1	PFAM: peptidase M56 BlaR1; KEGG: cbe:Cbei_1063 peptidase M56, BlaR1
YP_003241201.1	PFAM: Radical SAM domain protein; KEGG: bbe:BBR47_07440 hypothetical protein
YP_003241202.1	PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: phe:Phep_3476 DEAD/DEAH box helicase domain protein
YP_003241203.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bcb:BCB4264_A0656 hypothetical protein
YP_003241204.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: ckr:CKR_2530 hypothetical protein
YP_003241205.1	PFAM: NUDIX hydrolase; KEGG: bwe:BcerKBAB4_5364 NUDIX hydrolase
YP_003241206.1	PFAM: NUDIX hydrolase; KEGG: bcu:BCAH820_3636 MutT/NUDIX family protein
YP_003241207.1	PFAM: Phosphoglycerate mutase; KEGG: pjd:Pjdr2_0911 phosphoglycerate mutase
YP_003241208.1	PFAM: Protein of unknown function DUF2087; regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pjd:Pjdr2_5726 transcriptional regulator, ArsR family
YP_003241209.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: afl:Aflv_0147 RNA polymerase sigma factor SigW
YP_003241210.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: oih:OB0299 hypothetical protein
YP_003241211.1	KEGG: sus:Acid_0791 hypothetical protein
YP_003241212.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: pjd:Pjdr2_0601 prolipoprotein diacylglyceryl transferase
YP_003241213.1	PFAM: Radical SAM domain protein; KEGG: pjd:Pjdr2_0600 radical SAM domain protein
YP_003241214.1	KEGG: cpy:Cphy_3572 hypothetical protein
YP_003241215.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pjd:Pjdr2_3707 transcriptional regulator, LacI family
YP_003241216.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_3706 histidine kinase
YP_003241217.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3705 two component transcriptional regulator, AraC family
YP_003241218.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3704 binding-protein-dependent transport systems inner membrane component
YP_003241219.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3703 binding-protein-dependent transport systems inner membrane component
YP_003241220.1	KEGG: pjd:Pjdr2_3702 hypothetical protein
YP_003241221.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3701 extracellular solute-binding protein family 1
YP_003241222.1	PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: bbe:BBR47_46380 probable transcriptional regulator
YP_003241223.1	PFAM: S-layer domain protein; Ig domain protein group 2 domain protein; regulator of chromosome condensation RCC1; SMART: Ig domain protein group 2 domain protein; Ig domain protein group 1 domain protein; KEGG: mxa:MXAN_0889 RCC1 repeat-containing protein
YP_003241224.1	PFAM: SEC-C motif domain protein; KEGG: pjd:Pjdr2_0984 sec-C motif domain protein
YP_003241225.1	KEGG: oih:OB3062 hypothetical protein
YP_003241227.1	KEGG: pjd:Pjdr2_4952 hypothetical protein
YP_003241228.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gwc:GWCH70_1984 ABC transporter related
YP_003241229.1	PFAM: transport system permease protein; KEGG: pjd:Pjdr2_4367 transport system permease protein
YP_003241230.1	PFAM: transport system permease protein; KEGG: pjd:Pjdr2_4366 transport system permease protein
YP_003241231.1	PFAM: periplasmic binding protein; KEGG: pjd:Pjdr2_4365 periplasmic binding protein
YP_003241232.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro01650 hypothetical protein
YP_003241233.1	PFAM: TENA/THI-4 domain protein; KEGG: bld:BLi04205 hypothetical protein
YP_003241234.1	PFAM: hydroxyethylthiazole kinase; KEGG: hypothetical protein
YP_003241235.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: bcg:BCG9842_B4540 phosphomethylpyrimidine kinase
YP_003241236.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
YP_003241237.1	PFAM: PRD domain protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Helix-turn-helix type 11 domain protein; M trans-acting positive regulator; KEGG: bcy:Bcer98_1169 transcriptional antiterminator, BglG
YP_003241238.1	TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bcq:BCQ_5092 putative PTS mannose-specific enzyme IIBCA component
YP_003241239.1	KEGG: bbe:BBR47_43300 hypothetical protein
YP_003241240.1	PFAM: transcriptional regulator PadR family protein; KEGG: bbe:BBR47_43310 hypothetical protein
YP_003241241.1	KEGG: pjd:Pjdr2_3250 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B
YP_003241243.1	PFAM: aminoglycoside phosphotransferase; KEGG: aoe:Clos_0340 hypothetical protein
YP_003241244.1	KEGG: bbr:BB1617 putative secreted protein
YP_003241245.1	PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: det:DET1143 hypothetical protein
YP_003241246.1	PFAM: major royal jelly protein; KEGG: hypothetical protein
YP_003241247.1	KEGG: pjd:Pjdr2_1068 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_003241248.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1067 transcriptional regulator, AraC family
YP_003241249.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: pjd:Pjdr2_0826 cell envelope-related transcriptional attenuator
YP_003241250.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bld:BLi00456 hypothetical protein
YP_003241251.1	PFAM: Stress-induced protein, KGG, repeat; KEGG: bld:BLi00534 GsiB
YP_003241252.1	PFAM: helix-turn-helix HxlR type; KEGG: pjd:Pjdr2_5308 transcriptional regulator, HxlR family
YP_003241253.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_2776 aldo/keto reductase
YP_003241254.1	KEGG: pjd:Pjdr2_0886 cell wall/surface repeat protein; TIGRFAM: cell wall/surface repeat protein; PFAM: Listeria/Bacterioides repeat protein; Tail Collar domain protein; S-layer domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein
YP_003241255.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_5931 aldo/keto reductase
YP_003241256.1	KEGG: cby:CLM_3188 hypothetical protein
YP_003241257.1	KEGG: pjd:Pjdr2_0945 hypothetical protein
YP_003241258.1	KEGG: pjd:Pjdr2_5420 adenylate cyclase
YP_003241259.1	PFAM: YheO domain protein; KEGG: chy:CHY_2461 PAC domain-containing protein
YP_003241260.1	PFAM: aminotransferase class I and II; KEGG: shi:Shel_10650 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
YP_003241261.1	TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; KEGG: pmr:PMI1274 Na+/H+ antiporter
YP_003241262.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: drm:Dred_2343 putative endoribonuclease L-PSP
YP_003241263.1	KEGG: pjd:Pjdr2_0007 hypothetical protein
YP_003241264.1	KEGG: lsp:Bsph_0641 hypothetical protein
YP_003241265.1	PFAM: protein of unknown function DUF419; KEGG: cai:Caci_6266 protein of unknown function DUF419
YP_003241266.1	PFAM: glycoside hydrolase family 19; KEGG: cpy:Cphy_1943 chitinase
YP_003241267.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cpr:CPR_0848 MATE efflux family protein
YP_003241268.1	PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pjd:Pjdr2_3564 ATP-dependent transcriptional regulator, MalT-like, LuxR family
YP_003241269.1	PFAM: Listeria/Bacterioides repeat protein; regulator of chromosome condensation RCC1; S-layer domain protein; KEGG: mxa:MXAN_5448 RCC1 repeat-containing protein
YP_003241270.1	PFAM: basic membrane lipoprotein; KEGG: bbe:BBR47_55710 ABC transporter substrate binding protein
YP_003241271.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_55700 ABC transporter ATP binding protein
YP_003241272.1	PFAM: inner-membrane translocator; KEGG: bbe:BBR47_55690 ABC transporter permease protein
YP_003241273.1	PFAM: inner-membrane translocator; KEGG: bbe:BBR47_55680 ABC transporter permease protein
YP_003241274.1	PFAM: oxidoreductase molybdopterin binding; KEGG: pjd:Pjdr2_4317 oxidoreductase molybdopterin binding
YP_003241275.1	PFAM: purine or other phosphorylase family 1; KEGG: bbe:BBR47_55660 putative purine nucleoside phosphorylase
YP_003241276.1	PFAM: DinB family protein; KEGG: pjd:Pjdr2_1817 DinB family protein
YP_003241277.1	PFAM: regulatory protein TetR; KEGG: bbe:BBR47_33210 probable transcriptional regulator
YP_003241278.1	PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: bbe:BBR47_33200 hypothetical protein
YP_003241280.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bha:BH3882 RNA polymerase ECF-type sigma factor
YP_003241281.1	KEGG: bha:BH3881 hypothetical protein
YP_003241283.1	PFAM: regulatory protein TetR; KEGG: bwe:BcerKBAB4_0974 TetR family transcriptional regulator
YP_003241284.1	KEGG: bay:RBAM_002560 YqeB
YP_003241285.1	KEGG: pjd:Pjdr2_1676 hypothetical protein
YP_003241286.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_1677 histidine kinase
YP_003241287.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_1678 two component transcriptional regulator, AraC family
YP_003241288.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1679 extracellular solute-binding protein family 1
YP_003241289.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1680 binding-protein-dependent transport systems inner membrane component
YP_003241290.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1681 binding-protein-dependent transport systems inner membrane component
YP_003241291.1	PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: pjd:Pjdr2_1682 beta-galactosidase
YP_003241292.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_1683 major facilitator superfamily MFS_1
YP_003241293.1	molecular chaperone
YP_003241294.1	KEGG: bbe:BBR47_55730 hypothetical protein
YP_003241295.1	PFAM: major facilitator superfamily MFS_1; KEGG: bca:BCE_2372 major facilitator family transporter
YP_003241296.1	PFAM: transcriptional regulator PadR family protein; KEGG: lsa:LSA0204 PadR family transcriptional regulator
YP_003241297.1	PFAM: helix-turn-helix HxlR type; KEGG: pjd:Pjdr2_3048 transcriptional regulator, HxlR family
YP_003241298.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pjd:Pjdr2_3047 NAD(P)H dehydrogenase (quinone)
YP_003241299.1	PFAM: protein of unknown function UPF0157; KEGG: bsu:BSU23670 hypothetical protein
YP_003241300.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: tex:Teth514_0399 response regulator receiver protein
YP_003241301.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_5331 cache sensor signal transduction histidine kinase
YP_003241302.1	PFAM: extracellular solute-binding protein family 1; KEGG: bbe:BBR47_47090 probable ABC transporter substrate binding protein
YP_003241303.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_47080 probable ABC transporter permease protein
YP_003241304.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_47070 probable ABC transporter permease protein
YP_003241305.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_1537 xylose isomerase domain-containing protein
YP_003241306.1	PFAM: Oxidoreductase domain; KEGG: sme:SMc04138 putative oxidoreductase protein
YP_003241307.1	PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: rca:Rcas_2202 oxidoreductase domain-containing protein
YP_003241308.1	catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate
YP_003241309.1	PFAM: amidohydrolase; KEGG: bcv:Bcav_3352 N-acetylglucosamine-6-phosphate deacetylase
YP_003241310.1	KEGG: btl:BALH_2245 chloramphenicol acetyltransferase
YP_003241311.1	PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bha:BH1889 hypothetical protein
YP_003241312.1	PFAM: DinB family protein; KEGG: bld:BLi01287 hypothetical protein
YP_003241313.1	KEGG: bha:BH3131 hypothetical protein
YP_003241314.1	KEGG: lmo:lmo0601 hypothetical protein
YP_003241315.1	PFAM: Erythromycin esterase; KEGG: lsp:Bsph_4494 erythromycin esterase-like protein
YP_003241316.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cbb:CLD_0298 hypothetical protein
YP_003241317.1	KEGG: lmh:LMHCC_1878 hypothetical protein
YP_003241318.1	PFAM: Methyltransferase type 11; KEGG: pjd:Pjdr2_1632 hypothetical protein
YP_003241319.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bbe:BBR47_33670 hypothetical protein
YP_003241320.1	PFAM: S-layer domain protein; KEGG: lsp:Bsph_3350 S-layer-like region
YP_003241321.1	KEGG: hypothetical protein
YP_003241322.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: pjd:Pjdr2_3707 transcriptional regulator, LacI family
YP_003241323.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4253 extracellular solute-binding protein family 1
YP_003241324.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4252 extracellular solute-binding protein family 1
YP_003241325.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4251 binding-protein-dependent transport systems inner membrane component
YP_003241326.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4250 binding-protein-dependent transport systems inner membrane component
YP_003241327.1	KEGG: pjd:Pjdr2_4247 hypothetical protein
YP_003241328.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4246 binding-protein-dependent transport systems inner membrane component
YP_003241329.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4245 binding-protein-dependent transport systems inner membrane component
YP_003241330.1	PFAM: glycoside hydrolase family 26; KEGG: dtu:Dtur_0277 mannan endo-1,4-beta-mannosidase
YP_003241331.1	PFAM: glycoside hydrolase family 2 sugar binding; KEGG: pjd:Pjdr2_0245 glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich
YP_003241332.1	KEGG: bha:BH0848 hypothetical protein
YP_003241334.1	PFAM: extracellular solute-binding protein family 5; KEGG: lsp:Bsph_1244 RGD-containing lipoprotein
YP_003241335.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1245 ABC transporter permease
YP_003241336.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1246 oligopeptide ABC transporter permease protein
YP_003241337.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: lsp:Bsph_1247 ABC transporter ATP-binding protein
YP_003241338.1	PFAM: lipolytic protein G-D-S-L family; KEGG: pmo:Pmob_0436 GDSL family lipase
YP_003241339.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpu:BPUM_3498 sugar ABC transporter ATP-binding protein
YP_003241340.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpu:BPUM_3497 sugar ABC transporter ATP-binding protein
YP_003241341.1	PFAM: inner-membrane translocator; KEGG: bpu:BPUM_3496 sugar ABC transporter ATP-binding/membrane protein
YP_003241342.1	PFAM: thioesterase superfamily protein; KEGG: oih:OB2111 hypothetical protein
YP_003241343.1	PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; KEGG: gwc:GWCH70_3164 oxidoreductase domain protein
YP_003241344.1	PFAM: fatty acid desaturase; KEGG: bbe:BBR47_07920 fatty acid desaturase
YP_003241345.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bbe:BBR47_07930 two-component sensor histidine kinase
YP_003241346.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bbe:BBR47_07940 two-component response regulator
YP_003241347.1	PFAM: sodium/hydrogen exchanger; KEGG: bsu:BSU09850 hypothetical protein
YP_003241348.1	PFAM: TrkA-C domain protein; KEGG: drm:Dred_1517 TrkA domain-containing protein
YP_003241349.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: lsp:Bsph_3289 short chain dehydrogenase
YP_003241350.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bcu:BCAH820_2591 methyltransferase
YP_003241351.1	PFAM: acyltransferase 3; KEGG: pjd:Pjdr2_5003 acyltransferase 3
YP_003241352.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: aoe:Clos_0230 two component transcriptional regulator
YP_003241353.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_5607 histidine kinase
YP_003241355.1	KEGG: nth:Nther_1541 hypothetical protein
YP_003241357.1	PFAM: copper amine oxidase domain protein; KEGG: pjd:Pjdr2_3661 copper amine oxidase domain protein
YP_003241358.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: ate:Athe_2329 transcriptional regulator, AraC family
YP_003241359.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3654 binding-protein-dependent transport systems inner membrane component
YP_003241360.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1251 protein LplC
YP_003241361.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4193 extracellular solute-binding protein family 1
YP_003241362.1	PFAM: amidohydrolase 2; KEGG: sme:SMa1734 hypothetical protein
YP_003241363.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll7906 putative ferredoxin
YP_003241364.1	KEGG: bcq:BCQ_PI081 hypothetical protein
YP_003241365.1	PFAM: Chromate transporter; KEGG: pjd:Pjdr2_5906 chromate transporter
YP_003241366.1	PFAM: Chromate transporter; KEGG: bsu:BSU36120 hypothetical protein
YP_003241367.1	PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: pjd:Pjdr2_5904 transcriptional regulator, AsnC family
YP_003241368.1	PFAM: Capsule synthesis protein, CapA; KEGG: pjd:Pjdr2_0899 hypothetical protein
YP_003241369.1	PFAM: metallophosphoesterase; S-layer domain protein; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: hypothetical protein
YP_003241370.1	KEGG: bcl:ABC0214 hypothetical protein
YP_003241371.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_2016 oxidoreductase domain protein
YP_003241372.1	PFAM: protein of unknown function DUF187; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: bcy:Bcer98_1788 hypothetical protein
YP_003241373.1	PFAM: SNARE associated Golgi protein; KEGG: bha:BH2293 hypothetical protein
YP_003241374.1	PFAM: membrane-flanked domain; KEGG: pjd:Pjdr2_1087 membrane-flanked domain protein
YP_003241375.1	PFAM: membrane-flanked domain; KEGG: pjd:Pjdr2_1086 membrane-flanked domain protein
YP_003241376.1	PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: bbe:BBR47_26130 putative transcriptional regulator
YP_003241377.1	PFAM: transcription activator effector binding; KEGG: bbe:BBR47_26140 hypothetical protein
YP_003241378.1	PFAM: GCN5-related N-acetyltransferase; KEGG: lsp:Bsph_4153 hypothetical protein
YP_003241379.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3280 sugar ABC transporter permease
YP_003241380.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0317 sugar ABC transporter permease
YP_003241381.1	PFAM: extracellular solute-binding protein family 1; KEGG: sen:SACE_1586 putative secreted sugar-binding protein
YP_003241382.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3576 transcriptional regulator, AraC family
YP_003241383.1	PFAM: acyltransferase 3; KEGG: mac:MA3638 hypothetical protein
YP_003241384.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: hypothetical protein
YP_003241385.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1250 protein LplB
YP_003241386.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1251 protein LplC
YP_003241387.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC0358 hypothetical protein
YP_003241388.1	PFAM: Aldose 1-epimerase; KEGG: bsu:BSU18360 hypothetical protein
YP_003241389.1	PFAM: oxidoreductase domain protein; KEGG: stm:STM2753 putative dehydrogenase
YP_003241390.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2740 binding-protein-dependent transport systems inner membrane component
YP_003241391.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tex:Teth514_0396 binding-protein-dependent transport systems inner membrane component
YP_003241392.1	PFAM: extracellular solute-binding protein family 1; KEGG: tte:TTE0799 sugar-binding periplasmic protein
YP_003241393.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5257 transcriptional regulator, AraC family
YP_003241395.1	PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; Ig domain protein group 2 domain protein; S-layer domain protein; Ig family protein; SMART: Ig domain protein group 2 domain protein; KEGG: pjd:Pjdr2_0981 Ig domain protein group 2 domain protein
YP_003241396.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: afl:Aflv_1415 transcriptional regulator, LysR family
YP_003241397.1	PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2963 ABC transporter, substrate binding protein
YP_003241398.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_1998 ABC transporter (permease)
YP_003241399.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2961 ABC transporter permease protein
YP_003241400.1	KEGG: gtn:GTNG_1996 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003241401.1	KEGG: gtn:GTNG_1995 peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003241402.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bha:BH0352 carboxypeptidase G2
YP_003241403.1	KEGG: esi:Exig_2963 hypothetical protein
YP_003241405.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pjd:Pjdr2_2015 protein of unknown function DUF6 transmembrane
YP_003241406.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: cpy:Cphy_0514 ECF subfamily RNA polymerase sigma-24 factor
YP_003241407.1	KEGG: aoe:Clos_0351 hypothetical protein
YP_003241408.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0556 sugar ABC transporter permease
YP_003241409.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0557 sugar ABC transporter permease
YP_003241410.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC0558 sugar ABC transporter substrate-binding protein
YP_003241411.1	PFAM: protein of unknown function DUF34; KEGG: gtn:GTNG_1760 NGG1-interacting factor 3
YP_003241412.1	PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gtn:GTNG_1766 regulatory protein
YP_003241413.1	PFAM: SpoOM family protein; Arrestin-like-like; KEGG: pjd:Pjdr2_0460 SpoOM family protein
YP_003241414.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: bbe:BBR47_09920 probable 23S rRNA (uracil-5-)-methyltransferase
YP_003241415.1	TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; KEGG: pjd:Pjdr2_0036 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
YP_003241416.1	KEGG: fjo:Fjoh_0631 hypothetical protein
YP_003241417.1	KEGG: fjo:Fjoh_0631 hypothetical protein
YP_003241418.1	PFAM: Domain of unknown function DUF1801; KEGG: bbe:BBR47_14460 hypothetical protein
YP_003241419.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bwe:BcerKBAB4_1358 GCN5-related N-acetyltransferase
YP_003241420.1	KEGG: bha:BH0380 rRNA adenine N-6-methyltransferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like
YP_003241421.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pjd:Pjdr2_0921 transcriptional regulator, MerR family
YP_003241422.1	PFAM: Thioredoxin domain; KEGG: pjd:Pjdr2_0922 thioredoxin domain protein
YP_003241423.1	PFAM: Abortive infection protein; KEGG: amt:Amet_3349 abortive infection protein
YP_003241424.1	KEGG: pjd:Pjdr2_3083 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein
YP_003241425.1	PFAM: glycoside hydrolase family 5; protein of unknown function DUF291; KEGG: bha:BH0603 endo-beta-1,4-glucanase (celulase B)
YP_003241426.1	PFAM: copper amine oxidase domain protein; KEGG: lsp:Bsph_2053 hypothetical protein
YP_003241427.1	PFAM: Proline dehydrogenase; KEGG: bcl:ABC0247 proline oxidase
YP_003241428.1	PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4092 transcriptional regulator, AraC family
YP_003241429.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rsa:RSal33209_0067 ArsR family transcriptional regulator
YP_003241430.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pjd:Pjdr2_0624 activator of HSP90 ATPase 1 family protein
YP_003241431.1	PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: oih:OB0308 hypothetical protein
YP_003241433.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lwe:lwe1178 ABC transporter, ATP-binding protein
YP_003241434.1	PFAM: protein of unknown function DUF214; KEGG: lmh:LMHCC_1429 ABC transporter, permease protein
YP_003241435.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bay:RBAM_008400 YfiB
YP_003241436.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bsu:BSU08220 hypothetical protein
YP_003241437.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_10140 probable tetracycline resistance protein
YP_003241438.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_3291 transcriptional regulator, LysR family
YP_003241439.1	KEGG: dth:DICTH_0994 histidinol-phosphate aminotransferase
YP_003241440.1	KEGG: bbe:BBR47_36320 hypothetical protein
YP_003241441.1	PFAM: protein of unknown function DUF990; KEGG: bbe:BBR47_36310 hypothetical protein
YP_003241442.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_36300 probable ABC transporter ATP binding protein
YP_003241443.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gtn:GTNG_1958 DNA-binding response regulator
YP_003241444.1	KEGG: sgr:SGR_3263 hypothetical protein
YP_003241445.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: hypothetical protein
YP_003241446.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: esi:Exig_1176 ABC transporter related
YP_003241447.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esi:Exig_1177 binding-protein-dependent transport systems inner membrane component
YP_003241448.1	PFAM: NLPA lipoprotein; KEGG: pjd:Pjdr2_4716 NlpA lipoprotein
YP_003241449.1	KEGG: bbe:BBR47_28650 peptidase T; TIGRFAM: peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20
YP_003241450.1	PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4561 transcriptional regulator, AraC family
YP_003241451.1	PFAM: glycoside hydrolase family 4; KEGG: pjd:Pjdr2_0045 glycoside hydrolase family 4
YP_003241452.1	KEGG: pjd:Pjdr2_2056 hypothetical protein
YP_003241453.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bbe:BBR47_51140 probable two-component sensor histidine kinase
YP_003241454.1	PFAM: extracellular solute-binding protein family 5; KEGG: pmo:Pmob_0488 extracellular solute-binding protein
YP_003241455.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmo:Pmob_0489 binding-protein-dependent transport systems inner membrane component
YP_003241456.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmo:Pmob_0490 binding-protein-dependent transport systems inner membrane component
YP_003241457.1	KEGG: chl:Chy400_1263 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003241458.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chl:Chy400_1262 ABC transporter related
YP_003241459.1	KEGG: pjd:Pjdr2_1032 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: PAC repeat-containing protein; ATP-binding region ATPase domain protein; PAS domain containing protein
YP_003241460.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: pjd:Pjdr2_1033 two component transcriptional regulator, LuxR family
YP_003241461.1	PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bha:BH3903 methyl-accepting chemotaxis protein
YP_003241462.1	PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4669 transcriptional regulator, AraC family
YP_003241463.1	PFAM: glycoside hydrolase family 4; KEGG: pjd:Pjdr2_4668 glycoside hydrolase family 4
YP_003241464.1	TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bbe:BBR47_49390 alanine dehydrogenase
YP_003241465.1	KEGG: sth:STH2122 hypothetical protein
YP_003241466.1	PFAM: protein of unknown function DUF1273; KEGG: pjd:Pjdr2_0982 protein of unknown function DUF1273
YP_003241467.1	KEGG: bha:BH3611 hypothetical protein
YP_003241468.1	KEGG: sth:STH2041 hypothetical protein
YP_003241469.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bwe:BcerKBAB4_2327 ECF subfamily RNA polymerase sigma-24 factor
YP_003241470.1	KEGG: pjd:Pjdr2_3555 hypothetical protein
YP_003241471.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: sth:STH940 G/U mismatch-specific DNA glycosylase
YP_003241472.1	PFAM: protein of unknown function DUF191; KEGG: pjd:Pjdr2_0344 protein of unknown function DUF191
YP_003241473.1	TIGRFAM: futalosine nucleosidase; PFAM: purine or other phosphorylase family 1; KEGG: bbe:BBR47_09530 putative menaquinone biosynthesis protein
YP_003241474.1	PFAM: regulatory protein TetR; KEGG: bld:BLi02514 YdgC
YP_003241475.1	KEGG: bha:BH3448 sugar ABC transporter (sugar-binding protein)
YP_003241476.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: gka:GK1912 two-component sensor histidine kinase
YP_003241477.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: gka:GK1911 two-component response regulator
YP_003241479.1	PFAM: S-layer domain protein; Ig domain protein group 2 domain protein; Ig domain protein group 1 domain protein; SMART: Ig domain protein group 2 domain protein; Ig domain protein group 1 domain protein; KEGG: bcv:Bcav_2782 Ig domain protein group 1 domain protein
YP_003241480.1	KEGG: gka:GK1910 ABC transporter (substrate-binding protein)
YP_003241481.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK1909 ABC transporter ATP-binding protein
YP_003241482.1	PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_0663 inner-membrane translocator
YP_003241483.1	KEGG: amt:Amet_3943 hypothetical protein
YP_003241484.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY4854 hypothetical protein
YP_003241485.1	PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: amt:Amet_3941 regulatory protein GntR, HTH
YP_003241486.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: pjd:Pjdr2_5381 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin
YP_003241487.1	KEGG: AGAP006454-PA
YP_003241488.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: tte:TTE2419 transcriptional regulator
YP_003241489.1	PFAM: ROK family protein; KEGG: cbi:CLJ_B1711 putative glucokinase
YP_003241490.1	PFAM: extracellular solute-binding protein family 1; KEGG: rsa:RSal33209_3410 sugar transport system periplasmic component
YP_003241491.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3281 sugar ABC transporter permease
YP_003241492.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3280 sugar ABC transporter permease
YP_003241493.1	PFAM: putative N-acetylmannosamine-6-phosphate epimerase; KEGG: kol:Kole_1183 N-acylglucosamine-6-phosphate 2-epimerase
YP_003241494.1	KEGG: hmo:HM1_3123 hypothetical protein
YP_003241495.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: cbi:CLJ_B0699 hypothetical protein
YP_003241496.1	PFAM: major facilitator superfamily MFS_1; KEGG: ere:EUBREC_0399 hypothetical protein
YP_003241497.1	PFAM: aminotransferase class I and II; KEGG: kol:Kole_0146 aminotransferase class I and II
YP_003241498.1	PFAM: Auxin Efflux Carrier; KEGG: ssp:SSP0142 putative permease
YP_003241499.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003241500.1	PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: bld:BLi00320 hypothetical protein
YP_003241501.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: pjd:Pjdr2_0124 peptidyl-prolyl cis-trans isomerase cyclophilin type
YP_003241505.1	KEGG: hma:rrnAC2757 hypothetical protein
YP_003241506.1	PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: bld:BLi04359 YbaR
YP_003241507.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pjd:Pjdr2_0989 histidine kinase
YP_003241508.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pjd:Pjdr2_0989 histidine kinase
YP_003241509.1	KEGG: pjd:Pjdr2_0990 hypothetical protein
YP_003241510.1	KEGG: pjd:Pjdr2_0991 hypothetical protein
YP_003241511.1	KEGG: hypothetical protein
YP_003241513.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_3651 GCN5-related N-acetyltransferase
YP_003241514.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
YP_003241515.1	PFAM: Ferritin Dps family protein; KEGG: gtn:GTNG_2760 DNA-protecting protein
YP_003241516.1	KEGG: bbe:BBR47_39140 hypothetical protein
YP_003241517.1	KEGG: bbe:BBR47_45860 NADPH-dependent 7-cyano-7-deazaguanine reductase; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_003241518.1	TIGRFAM: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE; PFAM: Radical SAM domain protein; KEGG: gwc:GWCH70_0896 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE
YP_003241519.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bcz:BCZK1233 6-pyruvoyl tetrahydrobiopterin synthase
YP_003241520.1	TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; KEGG: bcq:BCQ_1413 possible aluminum resistance protein
YP_003241522.1	KEGG: viral A-type inclusion protein
YP_003241524.1	KEGG: bsu:BSU33870 hypothetical protein
YP_003241526.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: stm:STM0410 putative regulatory protein
YP_003241527.1	PFAM: S-layer domain protein; KEGG: pjd:Pjdr2_5184 S-layer domain protein
YP_003241528.1	PFAM: Ig domain protein group 2 domain protein; KEGG: lsp:Bsph_p173 hypothetical protein
YP_003241529.1	KEGG: bbe:BBR47_33850 hypothetical protein
YP_003241530.1	PFAM: glycosyl transferase group 1; KEGG: pjd:Pjdr2_1429 glycosyl transferase group 1
YP_003241531.1	KEGG: pjd:Pjdr2_1430 hypothetical protein
YP_003241533.1	PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_1433 glycosyl transferase family 2
YP_003241534.1	KEGG: pjd:Pjdr2_1434 hypothetical protein
YP_003241535.1	KEGG: pjd:Pjdr2_1435 hypothetical protein
YP_003241536.1	KEGG: pjd:Pjdr2_1436 hypothetical protein
YP_003241537.1	KEGG: pjd:Pjdr2_1437 hypothetical protein
YP_003241538.1	PFAM: protein of unknown function DUF227; aminoglycoside phosphotransferase; KEGG: bay:RBAM_037530 hypothetical protein
YP_003241539.1	KEGG: bay:RBAM_037530 hypothetical protein
YP_003241540.1	TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: gur:Gura_3196 FkbH like protein
YP_003241541.1	KEGG: nmu:Nmul_A0283 acyl carrier protein, ACP
YP_003241542.1	KEGG: pzu:PHZ_c0012 acetyltransferase, GNAT family
YP_003241543.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ate:Athe_1238 nucleotide sugar dehydrogenase
YP_003241544.1	PFAM: glycosyl transferase family 2; KEGG: ter:Tery_2268 glycosyl transferase family protein
YP_003241545.1	PFAM: aminoglycoside phosphotransferase; KEGG: gtn:GTNG_0716 spore coat protein-like protein
YP_003241546.1	KEGG: pfo:Pfl01_4069 glycosyltransferase-like protein
YP_003241547.1	KEGG: mbu:Mbur_0669 cell surfacr protein
YP_003241548.1	PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_1431 glycosyl transferase family 2
YP_003241549.1	PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_3517 glycosyl transferase family 2
YP_003241550.1	PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_3516 glycosyl transferase family 2
YP_003241551.1	PFAM: Nucleotidyl transferase; KEGG: dth:DICTH_0148 glucose-1-phosphate thymidylyltransferase
YP_003241552.1	KEGG: pjd:Pjdr2_1439 hypothetical protein
YP_003241553.1	KEGG: pjd:Pjdr2_3515 hypothetical protein
YP_003241554.1	PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_1433 glycosyl transferase family 2
YP_003241555.1	KEGG: pfo:Pfl01_4069 glycosyltransferase-like protein
YP_003241556.1	KEGG: sus:Acid_6940 glycosyl transferase, group 1
YP_003241557.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pth:PTH_2574 pyridoxal phosphate-dependent enzyme
YP_003241558.1	PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; protein of unknown function DUF201; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: apr:Apre_1268 phosphoribosylglycinamide synthetase
YP_003241559.1	KEGG: pjd:Pjdr2_4989 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_003241560.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pjd:Pjdr2_4988 dTDP-glucose 4,6-dehydratase
YP_003241561.1	KEGG: mmi:MMAR_2342 MmpL family transport protein
YP_003241562.1	KEGG: pjd:Pjdr2_4466 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase
YP_003241563.1	TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: pjd:Pjdr2_4465 glucosamine-6-phosphate isomerase
YP_003241564.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bbe:BBR47_13390 transcriptional regulator
YP_003241565.1	PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pjd:Pjdr2_1442 transcriptional regulator, LuxR family
YP_003241567.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_0726 histidine kinase
YP_003241568.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_0727 two component transcriptional regulator, AraC family
YP_003241569.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_0728 extracellular solute-binding protein family 1
YP_003241570.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0729 binding-protein-dependent transport systems inner membrane component
YP_003241571.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0730 binding-protein-dependent transport systems inner membrane component
YP_003241572.1	PFAM: Ferrous iron transport B domain protein; nucleoside recognition domain protein; Ferrous iron transport protein B domain protein; KEGG: gwc:GWCH70_1973 ferrous iron transport B domain protein
YP_003241573.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: gwc:GWCH70_1972 small GTP-binding protein
YP_003241574.1	PFAM: FeoA family protein; KEGG: bbe:BBR47_51200 putative ferrous iron transport protein A
YP_003241575.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933 family protein; KEGG: bay:RBAM_005610 hypothetical protein
YP_003241576.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gka:GK1406 ArsR family transcriptional regulator
YP_003241577.1	KEGG: pjd:Pjdr2_3812 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein
YP_003241578.1	PFAM: beta-lactamase domain protein; KEGG: pjd:Pjdr2_4463 beta-lactamase domain protein
YP_003241579.1	TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: eat:EAT1b_2433 glucose-1-phosphate adenylyltransferase
YP_003241580.1	TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: bha:BH1086 required for glycogen biosynthesis
YP_003241581.1	KEGG: bha:BH1084 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_003241582.1	PFAM: phosphatidylglycerophosphatase A; KEGG: pjd:Pjdr2_4460 phosphatidylglycerophosphatase A
YP_003241583.1	PFAM: Lipoprotein LpqB, GerMN domain; KEGG: pjd:Pjdr2_4459 germination (cortex hydrolysis) and sporulation (stage II, multiple polar septa)
YP_003241584.1	KEGG: pjd:Pjdr2_4458 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
YP_003241585.1	KEGG: pjd:Pjdr2_4457 Ham1 family protein; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein
YP_003241586.1	KEGG: pjd:Pjdr2_4456 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II
YP_003241587.1	KEGG: pjd:Pjdr2_4455 hypothetical protein
YP_003241589.1	PFAM: copper amine oxidase domain protein; KEGG: dau:Daud_1216 copper amine oxidase domain-containing protein
YP_003241590.1	KEGG: gtn:GTNG_3034 hypothetical protein
YP_003241591.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_0711 GCN5-related N-acetyltransferase
YP_003241592.1	KEGG: bbe:BBR47_15520 hypothetical protein
YP_003241593.1	KEGG: bcl:ABC2288 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase
YP_003241594.1	PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: pjd:Pjdr2_3791 methyltransferase type 11
YP_003241595.1	PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: eca:ECA1337 hypothetical protein
YP_003241596.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_17840 hypothetical protein
YP_003241597.1	PFAM: type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; KEGG: bcl:ABC0537 hypothetical protein
YP_003241598.1	KEGG: pjd:Pjdr2_4451 hypothetical protein
YP_003241599.1	TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type; KEGG: pjd:Pjdr2_4450 trigger factor
YP_003241600.1	KEGG: pjd:Pjdr2_4449 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP
YP_003241601.1	KEGG: pjd:Pjdr2_4448 ATP-dependent Clp protease, ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase
YP_003241602.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_003241603.1	KEGG: pjd:Pjdr2_4446 sigma 54 interacting domain protein; TIGRFAM: ATP-dependent protease LonB; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; magnesium chelatase ChlI subunit; SMART: AAA ATPase
YP_003241604.1	KEGG: bbe:BBR47_17970 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase
YP_003241605.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_003241606.1	KEGG: pjd:Pjdr2_4443 hypothetical protein
YP_003241607.1	Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine
YP_003241608.1	KEGG: pjd:Pjdr2_4440 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like
YP_003241609.1	PFAM: cytochrome c assembly protein; KEGG: pjd:Pjdr2_4439 cytochrome c assembly protein
YP_003241610.1	TIGRFAM: siroheme synthase; KEGG: gka:GK0404 siroheme synthase
YP_003241611.1	KEGG: pjd:Pjdr2_4437 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase
YP_003241612.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: pjd:Pjdr2_4436 uroporphyrin-III C-methyltransferase
YP_003241613.1	PFAM: delta-aminolevulinic acid dehydratase; KEGG: pjd:Pjdr2_4435 porphobilinogen synthase
YP_003241614.1	TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: pjd:Pjdr2_4434 glutamate-1-semialdehyde-2,1-aminomutase
YP_003241615.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: pjd:Pjdr2_4433 pseudouridine synthase, RluA family
YP_003241616.1	PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: pjd:Pjdr2_4432 peptidoglycan-binding LysM
YP_003241617.1	TIGRFAM: valyl-tRNA synthetase; KEGG: pjd:Pjdr2_4429 valyl-tRNA synthetase
YP_003241618.1	TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: pjd:Pjdr2_4428 FolC bifunctional protein
YP_003241619.1	TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: pjd:Pjdr2_4427 UDP-N-acetylmuramate/alanine ligase
YP_003241620.1	PFAM: Sporulation domain protein; KEGG: pjd:Pjdr2_4426 hypothetical protein
YP_003241621.1	KEGG: pjd:Pjdr2_4425 hypothetical protein
YP_003241622.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: bbe:BBR47_18310 septum formation protein Maf
YP_003241623.1	TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: pjd:Pjdr2_4423 DNA repair protein RadC
YP_003241624.1	TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: pjd:Pjdr2_4422 cell shape determining protein, MreB/Mrl family
YP_003241625.1	TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: pjd:Pjdr2_4421 rod shape-determining protein MreC
YP_003241626.1	TIGRFAM: rod shape-determining protein MreD; KEGG: pjd:Pjdr2_4420 rod shape-determining protein MreD
YP_003241627.1	TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: pjd:Pjdr2_4419 septum site-determining protein MinC
YP_003241628.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pjd:Pjdr2_4418 septum site-determining protein MinD
YP_003241629.1	PFAM: Peptidase M23; KEGG: pjd:Pjdr2_4416 peptidase M23
YP_003241630.1	PFAM: peptidase M50; KEGG: pjd:Pjdr2_4415 peptidase M50
YP_003241631.1	KEGG: pjd:Pjdr2_4414 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein
YP_003241632.1	TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: pjd:Pjdr2_4413 ribosomal protein L21
YP_003241633.1	PFAM: protein of unknown function DUF464; KEGG: pjd:Pjdr2_4412 protein of unknown function DUF464
YP_003241634.1	TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: pjd:Pjdr2_4411 ribosomal protein L27
YP_003241635.1	TIGRFAM: GTP-binding protein Obg/CgtA; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; KEGG: pjd:Pjdr2_4409 GTP-binding protein Obg/CgtA
YP_003241636.1	KEGG: pjd:Pjdr2_6232 antifreeze protein type I
YP_003241637.1	KEGG: pjd:Pjdr2_6231 hypothetical protein
YP_003241638.1	KEGG: pjd:Pjdr2_6230 hypothetical protein
YP_003241640.1	PFAM: amino acid-binding ACT domain protein; KEGG: pjd:Pjdr2_4408 amino acid-binding ACT domain protein
YP_003241641.1	PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: pjd:Pjdr2_4407 homoserine dehydrogenase
YP_003241642.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_003241643.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate
YP_003241644.1	PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: pjd:Pjdr2_4405 prephenate dehydratase
YP_003241645.1	KEGG: afl:Aflv_0590 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV
YP_003241646.1	PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: pjd:Pjdr2_4404 peptidoglycan-binding LysM
YP_003241647.1	KEGG: pjd:Pjdr2_4403 hypothetical protein
YP_003241648.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_003241649.1	KEGG: pjd:Pjdr2_4401 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1
YP_003241650.1	KEGG: pjd:Pjdr2_4400 Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_003241651.1	TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: pjd:Pjdr2_4398 SpoIID/LytB domain protein
YP_003241652.1	TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: pjd:Pjdr2_4397 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
YP_003241653.1	KEGG: pjd:Pjdr2_4396 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase
YP_003241654.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: pjd:Pjdr2_4395 preprotein translocase, YajC subunit
YP_003241655.1	KEGG: pjd:Pjdr2_4394 hypothetical protein
YP_003241656.1	PFAM: protein of unknown function DUF421; KEGG: hypothetical protein
YP_003241657.1	TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: pjd:Pjdr2_4391 stage V sporulation protein B
YP_003241658.1	KEGG: pjd:Pjdr2_4390 hypothetical protein
YP_003241659.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pjd:Pjdr2_4387 cation diffusion facilitator family transporter
YP_003241660.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; Single-stranded-DNA-specific exonuclease RecJ-like; KEGG: pjd:Pjdr2_4386 single-stranded-DNA-specific exonuclease RecJ
YP_003241661.1	KEGG: pjd:Pjdr2_4385 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_003241662.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: drm:Dred_1317 uracil transporter
YP_003241663.1	KEGG: pjd:Pjdr2_4379 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003241664.1	TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: gka:GK2577 D-tyrosyl-tRNA(Tyr) deacylase
YP_003241667.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: ade:Adeh_3041 peptidase C56, PfpI
YP_003241668.1	KEGG: hypothetical protein
YP_003241669.1	KEGG: pjd:Pjdr2_4376 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein
YP_003241670.1	TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: pjd:Pjdr2_4375 aspartyl-tRNA synthetase
YP_003241671.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: pjd:Pjdr2_4374 UBA/ThiF-type NAD/FAD binding protein
YP_003241672.1	KEGG: bwe:BcerKBAB4_2615 UvrD/Rep helicase family protein
YP_003241674.1	PFAM: AAA ATPase central domain protein; magnesium chelatase ChlI subunit; SMART: AAA ATPase; KEGG: pjd:Pjdr2_4370 AAA ATPase central domain protein
YP_003241675.1	KEGG: gwc:GWCH70_0542 hypothetical protein
YP_003241676.1	KEGG: aoe:Clos_1144 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein
YP_003241677.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: bfs:BF3485 putative anaerobic ribonucleoside-triphosphate reductase activating protein
YP_003241678.1	TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; PP-loop domain protein; KEGG: pjd:Pjdr2_4359 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_003241679.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pjd:Pjdr2_4358 transcriptional regulator, BadM/Rrf2 family
YP_003241680.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pjd:Pjdr2_4357 aminotransferase class V
YP_003241681.1	PFAM: PRC-barrel domain protein; KEGG: pjd:Pjdr2_4356 hypothetical protein
YP_003241682.1	KEGG: pjd:Pjdr2_4355 hypothetical protein
YP_003241683.1	PFAM: protein of unknown function UPF0118; KEGG: bbe:BBR47_19010 hypothetical protein
YP_003241684.1	KEGG: pjd:Pjdr2_4346 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD
YP_003241685.1	PFAM: protein of unknown function DUF965; KEGG: pjd:Pjdr2_4345 protein of unknown function DUF965
YP_003241686.1	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: pjd:Pjdr2_4344 Holliday junction resolvase YqgF
YP_003241687.1	PFAM: protein of unknown function DUF1292; KEGG: pjd:Pjdr2_4343 protein of unknown function DUF1292
YP_003241688.1	PFAM: protein of unknown function DUF1292; KEGG: pjd:Pjdr2_4342 hypothetical protein
YP_003241689.1	PFAM: aminodeoxychorismate lyase; KEGG: pjd:Pjdr2_4340 aminodeoxychorismate lyase
YP_003241690.1	PFAM: peptidase U32; KEGG: bld:BLi02863 YrrN
YP_003241691.1	PFAM: peptidase U32; KEGG: gtn:GTNG_2482 U32 family peptidase
YP_003241692.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4339 methyl-accepting chemotaxis sensory transducer
YP_003241693.1	PFAM: GerA spore germination protein; KEGG: bbe:BBR47_44000 spore germination protein
YP_003241694.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bbe:BBR47_44010 spore germination protein
YP_003241695.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bbe:BBR47_44020 spore germination protein
YP_003241697.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pjd:Pjdr2_4338 penicillin-binding protein transpeptidase
YP_003241698.1	PFAM: protein of unknown function UPF0118; KEGG: pjd:Pjdr2_4337 permease-like protein
YP_003241699.1	PFAM: polysaccharide deacetylase; KEGG: pjd:Pjdr2_4336 polysaccharide deacetylase
YP_003241700.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_003241701.1	PFAM: Stress-induced protein, KGG, repeat; KEGG: bsu:BSU04400 general stress protein
YP_003241702.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mlo:mlr5413 phosphoglycolate phosphatase
YP_003241703.1	PFAM: Silent information regulator protein Sir2; KEGG: ckr:CKR_3362 hypothetical protein
YP_003241704.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_0447 aldo/keto reductase
YP_003241705.1	PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1006 transcriptional regulator, AraC family
YP_003241706.1	TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; KEGG: pjd:Pjdr2_1007 galactokinase
YP_003241707.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: pjd:Pjdr2_1008 UDP-glucose 4-epimerase
YP_003241708.1	catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism
YP_003241709.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: btk:BT9727_3465 NADH-dependent butanol dehydrogenase A
YP_003241710.1	KEGG: dhd:Dhaf_3316 protein of unknown function DUF107
YP_003241711.1	PFAM: band 7 protein; SMART: band 7 protein; KEGG: pjd:Pjdr2_3792 band 7 protein
YP_003241712.1	PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bcb:BCB4264_A4160 transcription antiterminator GlcT
YP_003241713.1	KEGG: gka:GK0991 PTS system, glucose-specific enzyme II, A component; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_003241714.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: afl:Aflv_1940 phosphocarrier protein HPr
YP_003241715.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: bcb:BCB4264_A4157 phosphoenolpyruvate-protein phosphotransferase
YP_003241716.1	KEGG: cpf:CPF_1087 pullulanase family protein; TIGRFAM: pullulanase, type I; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; pullanase-associated protein; SMART: alpha amylase catalytic sub domain
YP_003241717.1	TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; KEGG: mta:Moth_0078 50S ribosomal protein L25/general stress protein Ctc
YP_003241718.1	PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pay:PAU_03993 similar to amino acid abc transporter
YP_003241719.1	TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pjd:Pjdr2_3529 2-deoxy-D-gluconate 3-dehydrogenase
YP_003241720.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: pjd:Pjdr2_4637 transcriptional regulator, DeoR family
YP_003241721.1	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
YP_003241722.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bld:BLi04156 hypothetical protein
YP_003241723.1	TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: pjd:Pjdr2_0557 UreA ABC transporter, UreA binding protein
YP_003241724.1	TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_0558 UreA ABC transporter, permease protein UrtB
YP_003241725.1	TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_0559 UreA ABC transporter, permease protein UrtC
YP_003241726.1	TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: pjd:Pjdr2_0560 UreA ABC transporter, ATP-binding protein UrtD
YP_003241727.1	KEGG: pjd:Pjdr2_0561 UreA ABC transporter, ATP-binding protein UrtE; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003241728.1	catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism
YP_003241729.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: afl:Aflv_0528 transcriptional regulator AraR (HTH fused to periplasmic-binding domain)
YP_003241730.1	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
YP_003241731.1	catalyzes the phosphorylation of ribulose to ribulose 5-phosphate
YP_003241732.1	PFAM: 3-dehydroquinate synthase; KEGG: aac:Aaci_2896 3-dehydroquinate synthase
YP_003241733.1	PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein ArsR; KEGG: cbe:Cbei_2361 regulatory protein, ArsR
YP_003241734.1	PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bcl:ABC0397 alpha-L-arabinofuranosidase
YP_003241735.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_0683 extracellular solute-binding protein family 1
YP_003241736.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0684 binding-protein-dependent transport systems inner membrane component
YP_003241737.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0685 binding-protein-dependent transport systems inner membrane component
YP_003241738.1	KEGG: bbe:BBR47_18670 hypothetical protein
YP_003241739.1	PFAM: protein of unknown function DUF161; KEGG: gwc:GWCH70_1207 protein of unknown function DUF161
YP_003241740.1	PFAM: sodium/hydrogen exchanger; KEGG: pjd:Pjdr2_0587 sodium/hydrogen exchanger
YP_003241741.1	PFAM: TrkA-C domain protein; KEGG: pjd:Pjdr2_0588 TrkA-C domain protein
YP_003241744.1	PFAM: copper amine oxidase domain protein; KEGG: lsp:Bsph_2506 hypothetical protein
YP_003241745.1	KEGG: amt:Amet_1371 hypothetical protein
YP_003241746.1	PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_1773 extracellular solute-binding protein
YP_003241747.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: tex:Teth514_0398 histidine kinase internal region
YP_003241748.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: cce:Ccel_0995 two component transcriptional regulator, AraC family
YP_003241750.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5072 binding-protein-dependent transport systems inner membrane component
YP_003241751.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5071 binding-protein-dependent transport systems inner membrane component
YP_003241752.1	PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_3240 extracellular solute-binding protein
YP_003241753.1	PFAM: S-layer domain protein; protein of unknown function DUF187; KEGG: cpy:Cphy_1063 hypothetical protein
YP_003241757.1	PFAM: DNA polymerase beta domain protein region; KEGG: pjd:Pjdr2_0903 DNA polymerase beta domain protein region
YP_003241758.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: cth:Cthe_0737 phosphopantethiene-protein transferase
YP_003241759.1	PFAM: FAD dependent oxidoreductase; KEGG: bbe:BBR47_39750 hypothetical protein
YP_003241760.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1800 transcriptional regulator, AraC family
YP_003241761.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC1144 sugar ABC transporter substrate-binding protein
YP_003241762.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC1144 sugar ABC transporter substrate-binding protein
YP_003241763.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein
YP_003241764.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1804 binding-protein-dependent transport systems inner membrane component
YP_003241765.1	PFAM: glycoside hydrolase family 43; KEGG: bth:BT_3656 putative beta-xylosidase
YP_003241766.1	KEGG: bha:BH0495 hypothetical protein
YP_003241767.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: bha:BH0496 pectin degradation protein
YP_003241768.1	KEGG: csc:Csac_1155 esterase/lipase-like protein
YP_003241769.1	PFAM: ABC-2 type transporter; KEGG: bth:BT_0926 ABC-type transport, permease protein
YP_003241770.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE1863 ABC-type multidrug transport system, ATPase component
YP_003241771.1	KEGG: tte:TTE1864 S-layer domain-containing protein
YP_003241772.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bha:BH3216 RNA polymerase ECF-type sigma factor
YP_003241773.1	KEGG: bha:BH3217 hypothetical protein
YP_003241774.1	KEGG: pjd:Pjdr2_1998 dienelactone hydrolase-like protein
YP_003241775.1	PFAM: glycoside hydrolase family 76; Carbohydrate binding family 6; Fibronectin type III domain protein; SMART: cellulose binding type IV; KEGG: pjd:Pjdr2_0220 glycoside hydrolase family 76
YP_003241776.1	PFAM: extracellular solute-binding protein family 1; KEGG: cbl:CLK_3475 sugar ABC transporter, sugar-binding protein
YP_003241777.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC1215 sugar ABC transporter permease
YP_003241778.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0317 sugar ABC transporter permease
YP_003241779.1	PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_5036 hypothetical protein
YP_003241780.1	sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment
YP_003241782.1	KEGG: pjd:Pjdr2_1415 hypothetical protein
YP_003241783.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_0681 xylose isomerase domain protein TIM barrel
YP_003241784.1	PFAM: Acetyl xylan esterase; KEGG: pjd:Pjdr2_2962 acetyl xylan esterase
YP_003241785.1	KEGG: bbe:BBR47_56910 hypothetical protein
YP_003241786.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: drm:Dred_3203 ABC transporter related
YP_003241787.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpt:Rpal_2777 binding-protein-dependent transport systems inner membrane component
YP_003241788.1	KEGG: amt:Amet_1398 NMT1/THI5 like protein
YP_003241789.1	PFAM: isochorismatase hydrolase; KEGG: pjd:Pjdr2_3062 isochorismatase hydrolase
YP_003241790.1	PFAM: major facilitator superfamily MFS_1; KEGG: chl:Chy400_1740 drug resistance transporter, EmrB/QacA subfamily
YP_003241791.1	PFAM: peptidase M42 family protein; KEGG: afl:Aflv_0444 cellulase M related protein
YP_003241792.1	TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: pjd:Pjdr2_4030 stage V sporulation protein AC
YP_003241793.1	TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; KEGG: pjd:Pjdr2_4029 stage V sporulation protein AD
YP_003241794.1	TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; KEGG: pjd:Pjdr2_4028 stage V sporulation protein AE
YP_003241795.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pjd:Pjdr2_4026 ATPase associated with various cellular activities AAA_3
YP_003241796.1	PFAM: protein of unknown function DUF58; KEGG: pjd:Pjdr2_4025 protein of unknown function DUF58
YP_003241797.1	PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pjd:Pjdr2_4024 transglutaminase domain protein
YP_003241798.1	TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: pjd:Pjdr2_4023 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
YP_003241799.1	KEGG: pjd:Pjdr2_4022 nitric-oxide synthase; TIGRFAM: ribosome biogenesis GTPase YqeH; PFAM: GTP-binding protein HSR1-related
YP_003241800.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: pjd:Pjdr2_4021 shikimate 5-dehydrogenase
YP_003241801.1	PFAM: protein of unknown function UPF0044; KEGG: pjd:Pjdr2_4020 protein of unknown function UPF0044
YP_003241802.1	KEGG: pjd:Pjdr2_4019 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_003241803.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pjd:Pjdr2_4018 metal dependent phosphohydrolase
YP_003241804.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: pjd:Pjdr2_4017 iojap-like protein
YP_003241805.1	KEGG: pjd:Pjdr2_4016 RNA binding S1 domain protein
YP_003241806.1	PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: pjd:Pjdr2_4015 methyltransferase type 12
YP_003241807.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_4947 xylose isomerase domain protein TIM barrel
YP_003241808.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_4949 oxidoreductase domain protein
YP_003241809.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_4948 oxidoreductase domain protein
YP_003241810.1	PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4946 transcriptional regulator, AraC family
YP_003241811.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_003241812.1	may be involved in regulation of competence genes
YP_003241813.1	KEGG: gtn:GTNG_2453 late competence protein ComEA; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1
YP_003241814.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pjd:Pjdr2_2193 CMP/dCMP deaminase zinc-binding
YP_003241815.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: pjd:Pjdr2_2194 DNA internalization-related competence protein ComEC/Rec2
YP_003241816.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: pjd:Pjdr2_2195 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003241817.1	KEGG: pjd:Pjdr2_2196 hypothetical protein
YP_003241818.1	TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: pjd:Pjdr2_2197 DNA polymerase III, delta subunit
YP_003241819.1	TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: pjd:Pjdr2_2198 ribosomal protein S20
YP_003241820.1	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
YP_003241821.1	TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; KEGG: pjd:Pjdr2_2200 stage II sporulation protein P
YP_003241823.1	TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding; KEGG: pjd:Pjdr2_2202 GTP-binding protein LepA
YP_003241824.1	KEGG: pjd:Pjdr2_2203 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003241825.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_2204 GCN5-related N-acetyltransferase
YP_003241826.1	TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: pjd:Pjdr2_2205 heat-inducible transcription repressor HrcA
YP_003241827.1	PFAM: chaperonin Cpn60/TCP-1; KEGG: pth:PTH_0876 chaperonin GroEL
YP_003241828.1	PFAM: GrpE protein; KEGG: pjd:Pjdr2_2206 GrpE protein
YP_003241829.1	TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: pjd:Pjdr2_2207 chaperone protein DnaK
YP_003241830.1	KEGG: pjd:Pjdr2_2208 chaperone protein DnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein
YP_003241831.1	KEGG: pjd:Pjdr2_3156 hypothetical protein
YP_003241833.1	TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; methyltransferase small; KEGG: pjd:Pjdr2_2211 ribosomal protein L11 methyltransferase
YP_003241834.1	PFAM: peptidase M50; KEGG: pjd:Pjdr2_2212 peptidase M50
YP_003241835.1	PFAM: protein of unknown function DUF558; KEGG: pjd:Pjdr2_2213 protein of unknown function DUF558
YP_003241836.1	KEGG: pjd:Pjdr2_2214 RNA modification enzyme, MiaB family; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003241837.1	PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_2215 NUDIX hydrolase
YP_003241838.1	PFAM: Na+/Picotransporter; KEGG: pjd:Pjdr2_2216 Na+/Picotransporter
YP_003241839.1	SMART: PUA domain containing protein; KEGG: pjd:Pjdr2_2217 PUA domain containing protein
YP_003241840.1	TIGRFAM: ATP-dependent nuclease subunit B; KEGG: pjd:Pjdr2_2219 ATP-dependent nuclease subunit B
YP_003241841.1	TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase; KEGG: pjd:Pjdr2_2220 recombination helicase AddA
YP_003241842.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: gwc:GWCH70_0672 nuclease SbcCD, D subunit
YP_003241843.1	PFAM: SMC domain protein; KEGG: gtn:GTNG_0591 YirY
YP_003241844.1	PFAM: histidine triad (HIT) protein; KEGG: cce:Ccel_2095 histidine triad (HIT) protein
YP_003241845.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_003241846.1	PFAM: Protein of unknown function YOR215C, mitochondrial; KEGG: pjd:Pjdr2_2225 hypothetical protein
YP_003241847.1	PFAM: protein of unknown function DUF107; KEGG: pjd:Pjdr2_2226 protein of unknown function DUF107
YP_003241848.1	PFAM: band 7 protein; KEGG: pjd:Pjdr2_2227 band 7 protein
YP_003241849.1	KEGG: pjd:Pjdr2_2228 hypothetical protein
YP_003241850.1	TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: pjd:Pjdr2_2229 sporulation protein YqfC
YP_003241851.1	TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD; KEGG: pjd:Pjdr2_2230 sporulation protein YqfD
YP_003241852.1	PFAM: PhoH family protein; KEGG: pjd:Pjdr2_2231 PhoH family protein
YP_003241853.1	KEGG: pjd:Pjdr2_2232 7TM receptor with intracellular metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003241854.1	PFAM: protein of unknown function UPF0054; KEGG: pjd:Pjdr2_2233 protein of unknown function UPF0054
YP_003241855.1	PFAM: diacylglycerol kinase; KEGG: lba:Lebu_1863 diacylglycerol kinase
YP_003241856.1	TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; Cytidine and deoxycytidylate deaminase zinc-binding domain protein; KEGG: pjd:Pjdr2_2235 cytidine deaminase
YP_003241857.1	TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; protein synthesis factor GTP-binding; KEGG: pjd:Pjdr2_2236 GTP-binding protein Era
YP_003241858.1	KEGG: pjd:Pjdr2_2237 hypothetical protein
YP_003241859.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: pjd:Pjdr2_2238 DNA repair protein RecO
YP_003241860.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_003241861.1	KEGG: pjd:Pjdr2_2240 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: glycyl-tRNA synthetase beta subunit
YP_003241862.1	PFAM: protein of unknown function DUF188; KEGG: pjd:Pjdr2_2242 protein of unknown function DUF188
YP_003241863.1	KEGG: pjd:Pjdr2_2243 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein
YP_003241864.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; Bacterio-opsin activator HTH domain protein; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: pjd:Pjdr2_2244 RNA polymerase, sigma 70 subunit, RpoD subfamily
YP_003241865.1	PFAM: protein of unknown function DUF633; KEGG: pjd:Pjdr2_2246 protein of unknown function DUF633
YP_003241866.1	PFAM: protein of unknown function DUF34; KEGG: pjd:Pjdr2_2247 protein of unknown function DUF34
YP_003241867.1	KEGG: gwc:GWCH70_1774 hypothetical protein
YP_003241868.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pjd:Pjdr2_2248 peptidase S8 and S53 subtilisin kexin sedolisin
YP_003241869.1	KEGG: pjd:Pjdr2_2249 hypothetical protein
YP_003241870.1	PFAM: protein of unknown function DUF1540; KEGG: bbe:BBR47_41210 hypothetical protein
YP_003241871.1	KEGG: gtn:GTNG_2404 hypothetical protein
YP_003241872.1	PFAM: Lytic transglycosylase catalytic; KEGG: pjd:Pjdr2_3924 lytic transglycosylase catalytic
YP_003241873.1	PFAM: aminotransferase class V; KEGG: pjd:Pjdr2_3923 aminotransferase class V
YP_003241874.1	TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain protein; Queuosine synthesis-like; KEGG: pjd:Pjdr2_3922 thiamine biosynthesis/tRNA modification protein ThiI
YP_003241875.1	PFAM: Integral membrane protein TerC; KEGG: pjd:Pjdr2_2032 integral membrane protein TerC
YP_003241876.1	PFAM: Integral membrane protein TerC; KEGG: bbe:BBR47_11800 hypothetical protein
YP_003241877.1	KEGG: pjd:Pjdr2_3919 hypothetical protein
YP_003241878.1	TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; Miro domain protein; elongation factor Tu domain 2 protein; KEGG: pjd:Pjdr2_3918 GTP-binding protein TypA
YP_003241879.1	KEGG: pjd:Pjdr2_3917 hypothetical protein
YP_003241880.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: pjd:Pjdr2_3915 cell envelope-related transcriptional attenuator
YP_003241882.1	TIGRFAM: sporulation lipoprotein, YhcN/YlaJ family; PFAM: Sporulation lipoprotein YhcN/YlaJ-like; KEGG: pjd:Pjdr2_3913 sporulation lipoprotein, YhcN/YlaJ family
YP_003241883.1	PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: pjd:Pjdr2_3912 PhoH family protein
YP_003241884.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3911 extracellular solute-binding protein family 1
YP_003241885.1	KEGG: pjd:Pjdr2_3910 hypothetical protein
YP_003241886.1	KEGG: pjd:Pjdr2_3908 hypothetical protein
YP_003241887.1	TIGRFAM: transcription factor, RsfA family; KEGG: pjd:Pjdr2_3907 transcription factor, RsfA family
YP_003241888.1	KEGG: pjd:Pjdr2_3906 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein
YP_003241889.1	KEGG: pjd:Pjdr2_3905 hypothetical protein
YP_003241890.1	PFAM: extracellular solute-binding protein family 5; KEGG: pjd:Pjdr2_5833 extracellular solute-binding protein family 5
YP_003241891.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5832 binding-protein-dependent transport systems inner membrane component
YP_003241892.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5831 binding-protein-dependent transport systems inner membrane component
YP_003241893.1	KEGG: pjd:Pjdr2_5830 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003241894.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5829 oligopeptide/dipeptide ABC transporter, ATPase subunit
YP_003241895.1	PFAM: protein of unknown function UCP012535; KEGG: pjd:Pjdr2_3904 hypothetical protein
YP_003241896.1	KEGG: bbe:BBR47_38470 probable adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; Acetohydroxy acid isomeroreductase catalytic domain protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; S-adenosyl-L-homocysteine hydrolase
YP_003241897.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_003241898.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: pjd:Pjdr2_3898 S-adenosyl-methyltransferase MraW
YP_003241899.1	KEGG: pjd:Pjdr2_3897 cell division protein FtsL
YP_003241900.1	KEGG: pjd:Pjdr2_3896 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein
YP_003241901.1	KEGG: pjd:Pjdr2_3895 stage V sporulation protein D; TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein
YP_003241902.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: pjd:Pjdr2_3894 UDP-N-acetylmuramyl-tripeptide synthetase
YP_003241903.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: hypothetical protein
YP_003241904.1	TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; KEGG: pjd:Pjdr2_3892 phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_003241905.1	TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: pjd:Pjdr2_3891 UDP-N-acetylmuramoylalanine/D-glutamate ligase
YP_003241906.1	TIGRFAM: stage V sporulation protein E; cell division protein FtsW; PFAM: cell cycle protein; KEGG: pjd:Pjdr2_3890 stage V sporulation protein E
YP_003241907.1	KEGG: bbe:BBR47_38370 probable UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain
YP_003241908.1	KEGG: pjd:Pjdr2_3889 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein
YP_003241909.1	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: pjd:Pjdr2_3888 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_003241910.1	PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: pjd:Pjdr2_3887 polypeptide-transport-associated domain protein FtsQ-type
YP_003241911.1	TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: pjd:Pjdr2_3886 cell division protein FtsA
YP_003241912.1	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; KEGG: pjd:Pjdr2_3885 cell division protein FtsZ
YP_003241913.1	TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: pjd:Pjdr2_3883 sigma-E processing peptidase SpoIIGA
YP_003241914.1	sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation
YP_003241915.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin
YP_003241916.1	TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: pjd:Pjdr2_3880 sporulation protein, YlmC/YmxH family
YP_003241917.1	PFAM: protein of unknown function DUF152; KEGG: pjd:Pjdr2_3879 protein of unknown function DUF152
YP_003241918.1	PFAM: alanine racemase domain protein; KEGG: pjd:Pjdr2_3878 alanine racemase domain protein
YP_003241919.1	PFAM: protein of unknown function DUF552; KEGG: pjd:Pjdr2_3877 protein of unknown function DUF552
YP_003241920.1	PFAM: protein of unknown function YGGT; KEGG: bbe:BBR47_38210 hypothetical protein
YP_003241921.1	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: pjd:Pjdr2_3875 RNA-binding S4 domain protein
YP_003241922.1	TIGRFAM: DivIVA domain; PFAM: DivIVA family protein; KEGG: pjd:Pjdr2_3874 DivIVA family protein
YP_003241923.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin)
YP_003241924.1	KEGG: pjd:Pjdr2_3872 hypothetical protein
YP_003241925.1	TIGRFAM: sporulation protein, yteA family; KEGG: pjd:Pjdr2_3871 transcriptional regulator, TraR/DksA family
YP_003241926.1	TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: pjd:Pjdr2_3870 lipoprotein signal peptidase
YP_003241927.1	KEGG: pjd:Pjdr2_3869 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003241929.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_0245 ABC transporter, ATP-binding protein
YP_003241930.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_003241931.1	PFAM: phosphoribosyltransferase; KEGG: pjd:Pjdr2_3865 uracil phosphoribosyltransferase
YP_003241932.1	KEGG: pjd:Pjdr2_3864 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region
YP_003241933.1	TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pjd:Pjdr2_3863 dihydroorotase, multifunctional complex type
YP_003241934.1	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: pjd:Pjdr2_3862 carbamoyl-phosphate synthase, small subunit
YP_003241935.1	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; RimK domain protein ATP-grasp; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: pjd:Pjdr2_3861 carbamoyl-phosphate synthase, large subunit
YP_003241936.1	KEGG: pjd:Pjdr2_3860 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase
YP_003241937.1	TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: pjd:Pjdr2_3859 orotate phosphoribosyltransferase
YP_003241938.1	PFAM: regulatory protein TetR; KEGG: lic:LIC13073 TetR family transcriptional regulator
YP_003241939.1	KEGG: bwe:BcerKBAB4_3219 hypothetical protein
YP_003241940.1	KEGG: bwe:BcerKBAB4_3218 hypothetical protein
YP_003241941.1	KEGG: btk:BT9727_0819 hypothetical protein
YP_003241942.1	KEGG: bwe:BcerKBAB4_3216 hypothetical protein
YP_003241943.1	PFAM: protein of unknown function DUF909; KEGG: lmc:Lm4b_00065 a small heat shock protein of Clostridium acetobutylicum
YP_003241944.1	KEGG: pjd:Pjdr2_3851 hypothetical protein
YP_003241945.1	PFAM: protein of unknown function DUF421; KEGG: pjd:Pjdr2_4211 protein of unknown function DUF421
YP_003241948.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: pjd:Pjdr2_1654 glucose-methanol-choline oxidoreductase
YP_003241950.1	PFAM: major facilitator superfamily MFS_1; General substrate transporter; proton/sugar symporter LacY; KEGG: bbe:BBR47_50590 multidrug resistance protein
YP_003241951.1	PFAM: Tetracycline transcriptional regulator QacR-related domain protein; regulatory protein TetR; KEGG: pjd:Pjdr2_5114 transcriptional regulator, TetR family
YP_003241952.1	TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase; KEGG: pjd:Pjdr2_0329 polysaccharide deacetylase
YP_003241953.1	TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: pjd:Pjdr2_3849 uracil-DNA glycosylase
YP_003241955.1	PFAM: protein of unknown function UPF0118; KEGG: bha:BH2921 hypothetical protein
YP_003241956.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pjd:Pjdr2_3504 ErfK/YbiS/YcfS/YnhG family protein
YP_003241957.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_5583 histidine kinase
YP_003241958.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5582 two component transcriptional regulator, AraC family
YP_003241959.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5581 extracellular solute-binding protein family 1
YP_003241960.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5580 binding-protein-dependent transport systems inner membrane component
YP_003241961.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5579 binding-protein-dependent transport systems inner membrane component
YP_003241962.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: bfs:BF0766 putative beta-glucosidase
YP_003241963.1	PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; KEGG: tpd:Teth39_0612 alpha-mannosidase
YP_003241964.1	PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_5578 hypothetical protein
YP_003241965.1	PFAM: Glycoside hydrolase family 42 domain protein; KEGG: pjd:Pjdr2_5577 hypothetical protein
YP_003241966.1	PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: pjd:Pjdr2_5576 glycoside hydrolase family 38
YP_003241967.1	PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: oih:OB3212 hypothetical protein
YP_003241969.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH3872 hypothetical protein
YP_003241970.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cdf:CD2713 cell surface protein
YP_003241972.1	PFAM: regulatory protein TetR; KEGG: aoe:Clos_1262 TetR family transcriptional regulator
YP_003241973.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH2121 hypothetical protein
YP_003241974.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ckr:CKR_1413 hypothetical protein
YP_003241975.1	KEGG: ckr:CKR_1414 hypothetical protein
YP_003241976.1	KEGG: hypothetical protein
YP_003241977.1	PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B; KEGG: pjd:Pjdr2_1574 accessory gene regulator B
YP_003241979.1	KEGG: pjd:Pjdr2_3181 hypothetical protein
YP_003241983.1	PFAM: YolD-like protein; KEGG: bha:BH2742 hypothetical protein
YP_003241986.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aac:Aaci_0878 GCN5-related N-acetyltransferase
YP_003241987.1	KEGG: pjd:Pjdr2_3826 hypothetical protein
YP_003241988.1	PFAM: beta-lactamase domain protein; KEGG: pjd:Pjdr2_3825 beta-lactamase domain protein
YP_003241989.1	KEGG: pjd:Pjdr2_3823 hypothetical protein
YP_003241990.1	PFAM: protein of unknown function DUF1292; KEGG: pjd:Pjdr2_3822 protein of unknown function DUF1292
YP_003241991.1	PFAM: Orn/Lys/Arg decarboxylase major region; aminotransferase class I and II; Orn/Lys/Arg decarboxylase domain protein; aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pjd:Pjdr2_3820 Orn/Lys/Arg decarboxylase major region
YP_003241992.1	PFAM: protein of unknown function DUF1054; KEGG: bha:BH2637 hypothetical protein
YP_003241993.1	KEGG: pjd:Pjdr2_3811 hypothetical protein
YP_003241994.1	TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pjd:Pjdr2_3810 6-phosphogluconate dehydrogenase, decarboxylating
YP_003241995.1	KEGG: pjd:Pjdr2_3809 hypothetical protein
YP_003241996.1	PFAM: shikimate kinase; KEGG: pjd:Pjdr2_3808 shikimate kinase
YP_003241997.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gtn:GTNG_2741 rhodanese-like domain-containing protein
YP_003241998.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_003241999.1	PFAM: CoA-binding domain protein; KEGG: pjd:Pjdr2_3806 CoA-binding domain protein
YP_003242000.1	TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: pjd:Pjdr2_3805 PTS system, glucose subfamily, IIA subunit
YP_003242001.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: pjd:Pjdr2_3804 phosphoenolpyruvate-protein phosphotransferase
YP_003242002.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bay:RBAM_028280 hypothetical protein
YP_003242003.1	KEGG: pjd:Pjdr2_3801 hypothetical protein
YP_003242004.1	KEGG: pjd:Pjdr2_0393 general stress protein
YP_003242005.1	KEGG: pjd:Pjdr2_3800 global transcriptional regulator, catabolite control protein A; TIGRFAM: catabolite control protein A; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI
YP_003242006.1	PFAM: purine or other phosphorylase family 1; KEGG: pjd:Pjdr2_3799 adenosylhomocysteine nucleosidase
YP_003242007.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_3797 acetoin dehydrogenase
YP_003242008.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_003242009.1	PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein; KEGG: pjd:Pjdr2_3795 glycosyl transferase family 51
YP_003242010.1	KEGG: pjd:Pjdr2_3790 ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003242011.1	KEGG: pjd:Pjdr2_3789 diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein
YP_003242013.1	KEGG: pjd:Pjdr2_3787 peptidase M29 aminopeptidase II
YP_003242014.1	PFAM: phosphoryl transfer system HPr; KEGG: pjd:Pjdr2_3786 phosphotransferase system, phosphocarrier protein HPr
YP_003242015.1	depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; putative ligand binding protein
YP_003242016.1	TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: pjd:Pjdr2_3784 calcium/proton antiporter, CaCA family
YP_003242017.1	PFAM: protein of unknown function DUF322; KEGG: pjd:Pjdr2_3783 protein of unknown function DUF322
YP_003242018.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: pjd:Pjdr2_3782 cell division protein FtsW
YP_003242019.1	KEGG: pjd:Pjdr2_3781 hypothetical protein
YP_003242020.1	PFAM: NUDIX hydrolase; KEGG: kol:Kole_1715 NUDIX hydrolase
YP_003242021.1	KEGG: pjd:Pjdr2_3780 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_003242022.1	PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: pjd:Pjdr2_3778 type III restriction protein res subunit
YP_003242023.1	KEGG: hypothetical protein
YP_003242024.1	PFAM: protein of unknown function DUF1333; KEGG: pjd:Pjdr2_3776 protein of unknown function DUF1333
YP_003242025.1	PFAM: Uncharacterised protein family UPF0298; KEGG: pjd:Pjdr2_3775 hypothetical protein
YP_003242026.1	KEGG: pjd:Pjdr2_3774 hypothetical protein
YP_003242027.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_3773 transcriptional regulator, LysR family
YP_003242028.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pjd:Pjdr2_3772 PHP domain protein
YP_003242029.1	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: pjd:Pjdr2_3770 fibronectin-binding A domain protein
YP_003242030.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_3769 calcium-translocating P-type ATPase, PMCA-type
YP_003242031.1	KEGG: pjd:Pjdr2_3768 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase
YP_003242032.1	catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions
YP_003242033.1	PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: cth:Cthe_1317 hypothetical protein
YP_003242034.1	PFAM: protein of unknown function DUF370; KEGG: pjd:Pjdr2_3766 protein of unknown function DUF370
YP_003242035.1	Essential for recycling GMP and indirectly, cGMP
YP_003242036.1	TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: pjd:Pjdr2_3764 DNA-directed RNA polymerase, omega subunit
YP_003242037.1	KEGG: pjd:Pjdr2_3757 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein
YP_003242038.1	KEGG: pjd:Pjdr2_3756 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein
YP_003242039.1	KEGG: pjd:Pjdr2_3755 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_003242040.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: pjd:Pjdr2_3754 methionyl-tRNA formyltransferase
YP_003242041.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: pjd:Pjdr2_3753 sun protein
YP_003242042.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_003242043.1	KEGG: pjd:Pjdr2_3751 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein
YP_003242044.1	PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: pjd:Pjdr2_3750 serine/threonine protein kinase with PASTA sensor(s)
YP_003242045.1	TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: pjd:Pjdr2_3749 ribosome small subunit-dependent GTPase A
YP_003242046.1	KEGG: gtn:GTNG_1031 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase
YP_003242047.1	TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: pjd:Pjdr2_3745 ribosomal protein L28
YP_003242048.1	TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase; KEGG: pjd:Pjdr2_3743 Dak phosphatase
YP_003242049.1	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: pjd:Pjdr2_3742 DegV family protein
YP_003242050.1	KEGG: pjd:Pjdr2_3741 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_003242051.1	KEGG: pjd:Pjdr2_3740 hypothetical protein
YP_003242052.1	PFAM: protein of unknown function DUF159; KEGG: pjd:Pjdr2_3739 protein of unknown function DUF159
YP_003242053.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: gwc:GWCH70_3356 xanthine/uracil/vitamin C permease
YP_003242054.1	PFAM: protein of unknown function DUF1089; KEGG: bch:Bcen2424_4013 hypothetical protein
YP_003242055.1	PFAM: YolD-like protein; KEGG: bsu:BSU23700 hypothetical protein
YP_003242056.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_003242057.1	KEGG: pjd:Pjdr2_2075 hypothetical protein
YP_003242058.1	KEGG: bbe:BBR47_52070 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003242059.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bbe:BBR47_33370 arsenical resistance operon repressor
YP_003242060.1	KEGG: lsp:Bsph_2987 hypothetical protein
YP_003242061.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gtn:GTNG_1598 transcriptional regulator ArsR
YP_003242062.1	TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: bld:BLi02123 YdfA
YP_003242063.1	catalyzes the reduction of arsenate to arsenite; also can dephosphorylate tyrosine phosphorylated proteins, aryl phosphates, and acyl phosphates
YP_003242064.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bbe:BBR47_51680 probable transcriptional regulator
YP_003242065.1	TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: bcy:Bcer98_3067 50S ribosomal protein L33
YP_003242067.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mpo:Mpop_4893 alpha/beta hydrolase fold-3 domain protein
YP_003242068.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_5606 oxidoreductase domain protein
YP_003242069.1	KEGG: bcl:ABC0715 respiratory nitrate reductase alpha chain; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region
YP_003242070.1	TIGRFAM: nitrate reductase, beta subunit; KEGG: bcl:ABC0716 respiratory nitrate reductase beta chain
YP_003242071.1	TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: bcl:ABC0717 respiratory nitrate reductase delta chain
YP_003242072.1	KEGG: bcl:ABC0718 respiratory nitrate reductase gamma chain; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit
YP_003242073.1	KEGG: bcl:ABC0719 control of nitrate reduction
YP_003242074.1	KEGG: bcl:ABC0720 two-component sensor histidine kinase of nitrate reduction; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein
YP_003242075.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bcl:ABC0721 two-component response regulator of nitrate reduction
YP_003242076.1	KEGG: bcl:ABC0722 nitrate/nitrite transporter; TIGRFAM: PAS sensor protein; PFAM: major facilitator superfamily MFS_1; PAS fold domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_003242077.1	KEGG: bcl:ABC0723 hypothetical protein
YP_003242078.1	KEGG: pjd:Pjdr2_0259 hypothetical protein
YP_003242079.1	PFAM: glycoside hydrolase family 38; KEGG: pdi:BDI_1625 hypothetical protein
YP_003242080.1	KEGG: cpi:Cpin_2424 ROK family protein
YP_003242081.1	KEGG: phe:Phep_0756 hypothetical protein
YP_003242082.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_2977 transcriptional regulator, AraC family
YP_003242083.1	PFAM: protein of unknown function DUF1541; KEGG: bsu:BSU05790 hypothetical protein
YP_003242084.1	PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: pjd:Pjdr2_1249 domain of unknown function DUF1731
YP_003242085.1	TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: bbe:BBR47_22460 ornithine aminotransferase
YP_003242086.1	TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bpu:BPUM_0159 arginase
YP_003242087.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1869 extracellular solute-binding protein family 1
YP_003242088.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1868 binding-protein-dependent transport systems inner membrane component
YP_003242089.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1867 binding-protein-dependent transport systems inner membrane component
YP_003242090.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pjd:Pjdr2_3988 transcriptional regulator, LacI family
YP_003242091.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: bld:BLi03841 hypothetical protein
YP_003242092.1	PFAM: RbsD or FucU transport; KEGG: pjd:Pjdr2_3986 RbsD or FucU transport
YP_003242093.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bld:BLi03843 RbsA
YP_003242094.1	PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_3984 inner-membrane translocator
YP_003242095.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pjd:Pjdr2_3983 periplasmic binding protein/LacI transcriptional regulator
YP_003242096.1	PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: lwe:lwe2175 Gfo/Idh/MocA family oxidoreductase
YP_003242097.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_5593 two component transcriptional regulator, AraC family
YP_003242098.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_5592 histidine kinase
YP_003242099.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5591 binding-protein-dependent transport systems inner membrane component
YP_003242100.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5590 binding-protein-dependent transport systems inner membrane component
YP_003242101.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5589 extracellular solute-binding protein family 1
YP_003242102.1	PFAM: protein of unknown function DUF1037; KEGG: pjd:Pjdr2_5047 protein of unknown function DUF1037
YP_003242103.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_5587 oxidoreductase domain protein
YP_003242104.1	KEGG: mea:Mex_2p1301 hypothetical protein
YP_003242105.1	TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: pjd:Pjdr2_3625 cobyric acid synthase CobQ
YP_003242106.1	KEGG: pjd:Pjdr2_5322 hypothetical protein
YP_003242107.1	PFAM: glutaredoxin; KEGG: fno:Fnod_0854 YruB family glutaredoxin-like protein
YP_003242108.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; KEGG: smd:Smed_2232 6-phosphogluconate dehydrogenase NAD-binding
YP_003242109.1	KEGG: pjd:Pjdr2_3950 hypothetical protein
YP_003242110.1	KEGG: pjd:Pjdr2_3949 hypothetical protein
YP_003242111.1	PFAM: glutathionylspermidine synthase; KEGG: pjd:Pjdr2_3948 glutathionylspermidine synthase
YP_003242112.1	KEGG: pjd:Pjdr2_3947 hypothetical protein
YP_003242113.1	PFAM: protein of unknown function DUF350; KEGG: pjd:Pjdr2_3946 protein of unknown function DUF350
YP_003242114.1	PFAM: Ion transport 2 domain protein ; TrkA-N domain protein; KEGG: pjd:Pjdr2_2973 ion transport 2 domain protein
YP_003242115.1	PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bbe:BBR47_13170 probable transcriptional regulator
YP_003242116.1	PFAM: HPP family protein; KEGG: bcb:BCB4264_A0999 hypothetical protein
YP_003242117.1	KEGG: bbe:BBR47_13550 hypothetical protein
YP_003242118.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: bbe:BBR47_13560 hypothetical protein
YP_003242119.1	PFAM: glycosyl transferase family 2; chitin synthase; KEGG: bbe:BBR47_13570 hypothetical protein
YP_003242120.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bbe:BBR47_13580 non-DNA binding response regulator
YP_003242121.1	KEGG: bbe:BBR47_13590 putative UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_003242122.1	KEGG: bbe:BBR47_13640 hypothetical protein
YP_003242123.1	PFAM: polysaccharide deacetylase; KEGG: bbe:BBR47_07820 hypothetical protein
YP_003242124.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bbe:BBR47_57510 hypothetical protein
YP_003242125.1	PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; chitin synthase; KEGG: bbe:BBR47_57500 putative N-acetylglucosaminyltransferase
YP_003242126.1	PFAM: polysaccharide deacetylase; KEGG: bbe:BBR47_57490 hypothetical protein
YP_003242127.1	KEGG: bbe:BBR47_57480 hypothetical protein
YP_003242128.1	TIGRFAM: YhgE/Pip C-terminal domain protein; YhgE/Pip N-terminal domain protein; PFAM: ABC-2 type transporter; KEGG: oih:OB2735 phage infection protein
YP_003242129.1	KEGG: pjd:Pjdr2_3736 hypothetical protein
YP_003242130.1	PFAM: cyclic nucleotide-binding; KEGG: bcq:BCQ_1521 cAMP-dependent protein kinase, regulatory subunit
YP_003242131.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
YP_003242132.1	PFAM: protein of unknown function DUF161; KEGG: bbe:BBR47_39330 hypothetical protein
YP_003242133.1	PFAM: Protein of unknown function DUF2188; KEGG: cyc:PCC7424_4379 hypothetical protein
YP_003242134.1	KEGG: sth:STH1761 bifunctional methionine sulfoxide reductase A/B protein; TIGRFAM: peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B
YP_003242135.1	PFAM: SNARE associated Golgi protein; KEGG: bha:BH2293 hypothetical protein
YP_003242136.1	PFAM: Integral membrane protein TerC; KEGG: gtn:GTNG_0523 hypothetical protein
YP_003242137.1	KEGG: bbe:BBR47_50800 hypothetical protein
YP_003242138.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: aac:Aaci_2284 transcriptional regulator, AraC family
YP_003242139.1	PFAM: oxidoreductase domain protein; KEGG: rca:Rcas_4405 oxidoreductase domain-containing protein
YP_003242140.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_1881 oxidoreductase domain protein
YP_003242141.1	PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: pjd:Pjdr2_5725 xylose isomerase domain protein TIM barrel
YP_003242142.1	PFAM: protein of unknown function DUF1037; KEGG: pjd:Pjdr2_4862 protein of unknown function DUF1037
YP_003242143.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: bwe:BcerKBAB4_1455 uracil-DNA glycosylase superfamily protein
YP_003242144.1	PFAM: helix-turn-helix HxlR type; KEGG: aac:Aaci_1948 transcriptional regulator, HxlR family
YP_003242145.1	KEGG: bcx:BCA_3004 putative glutathionylspermidine synthase
YP_003242146.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: bay:RBAM_003510 hypothetical protein
YP_003242147.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: gka:GK1867 assimilatory nitrite reductase subunit
YP_003242148.1	PFAM: formate/nitrite transporter; KEGG: bcl:ABC0899 formate/nitrite transporter
YP_003242149.1	KEGG: pjd:Pjdr2_3839 hypothetical protein
YP_003242150.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pjd:Pjdr2_5250 transcriptional regulator, Crp/Fnr family
YP_003242151.1	PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: bld:BLi04290 bifunctional acetaldehyde-CoA/alcohol dehydrogenase
YP_003242152.1	KEGG: pjd:Pjdr2_5252 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical
YP_003242153.1	KEGG: pjd:Pjdr2_5251 pyruvate formate-lyase activating enzyme; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein
YP_003242154.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1455 extracellular solute-binding protein family 1
YP_003242155.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1456 binding-protein-dependent transport systems inner membrane component
YP_003242156.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1457 binding-protein-dependent transport systems inner membrane component
YP_003242157.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_1458 histidine kinase
YP_003242158.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: csc:Csac_2545 response regulator receiver protein
YP_003242159.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: pjd:Pjdr2_1460 beta-N-acetylhexosaminidase
YP_003242160.1	PFAM: copper amine oxidase domain protein; KEGG: pjd:Pjdr2_3328 copper amine oxidase domain protein
YP_003242161.1	PFAM: ferric-uptake regulator; KEGG: pjd:Pjdr2_2271 ferric uptake regulator, Fur family
YP_003242162.1	PFAM: protein of unknown function DUF37; KEGG: pjd:Pjdr2_2272 protein of unknown function DUF37
YP_003242163.1	TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; KEGG: pjd:Pjdr2_2273 methionyl-tRNA synthetase
YP_003242164.1	PFAM: periplasmic solute binding protein; KEGG: pjd:Pjdr2_2274 periplasmic solute binding protein
YP_003242165.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2275 ABC transporter related
YP_003242166.1	PFAM: ABC-3 protein; KEGG: pjd:Pjdr2_2276 ABC-3 protein
YP_003242167.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: pjd:Pjdr2_2277 cytochrome c biogenesis protein transmembrane region
YP_003242168.1	PFAM: iron dependent repressor; SMART: iron dependent repressor; KEGG: pjd:Pjdr2_2278 iron (metal) dependent repressor, DtxR family
YP_003242169.1	PFAM: protein of unknown function DUF187; copper amine oxidase domain protein; KEGG: bbe:BBR47_57240 hypothetical protein
YP_003242170.1	PFAM: Patatin; KEGG: pjd:Pjdr2_2282 patatin
YP_003242171.1	KEGG: pjd:Pjdr2_2283 hypothetical protein
YP_003242172.1	PFAM: protein of unknown function DUF1385; KEGG: pjd:Pjdr2_2284 protein of unknown function DUF1385
YP_003242173.1	KEGG: pjd:Pjdr2_2285 hypothetical protein
YP_003242174.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_003242175.1	PFAM: peptidase M24; creatinase; KEGG: pjd:Pjdr2_2287 peptidase M24
YP_003242176.1	TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; KEGG: pjd:Pjdr2_2288 translation elongation factor P
YP_003242177.1	TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; KEGG: pjd:Pjdr2_2289 aspartate kinase
YP_003242178.1	KEGG: pjd:Pjdr2_2293 hypothetical protein
YP_003242179.1	TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2294 stage III sporulation protein AA
YP_003242180.1	TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB; KEGG: pjd:Pjdr2_2295 stage III sporulation protein AB
YP_003242181.1	TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein; KEGG: pjd:Pjdr2_2296 stage III sporulation protein AC
YP_003242182.1	TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD; KEGG: pjd:Pjdr2_2297 stage III sporulation protein AD
YP_003242183.1	TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; KEGG: pjd:Pjdr2_2298 stage III sporulation protein AE
YP_003242184.1	PFAM: Sporulation stage III protein AF; KEGG: pjd:Pjdr2_2299 stage III sporulation protein AF
YP_003242185.1	TIGRFAM: stage III sporulation protein AG; KEGG: pjd:Pjdr2_2300 stage III sporulation protein AG
YP_003242186.1	KEGG: pjd:Pjdr2_2301 mutants block sporulation after engulfment (stage III sporulation)
YP_003242187.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: pjd:Pjdr2_2302 acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_003242188.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; RimK domain protein ATP-grasp; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: pjd:Pjdr2_2303 acetyl-CoA carboxylase, biotin carboxylase
YP_003242189.1	PFAM: protein of unknown function DUF322; KEGG: pjd:Pjdr2_2304 protein of unknown function DUF322
YP_003242190.1	KEGG: pjd:Pjdr2_2305 hypothetical protein
YP_003242191.1	KEGG: pjd:Pjdr2_2306 hypothetical protein
YP_003242192.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: pjd:Pjdr2_2307 NusB antitermination factor
YP_003242193.1	PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: pjd:Pjdr2_2308 methylenetetrahydrofolate dehydrogenase (NADP(+))
YP_003242194.1	KEGG: pjd:Pjdr2_2309 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type
YP_003242195.1	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: pjd:Pjdr2_2310 exodeoxyribonuclease VII, small subunit
YP_003242196.1	PFAM: Polyprenyl synthetase; KEGG: pjd:Pjdr2_2311 polyprenyl synthetase
YP_003242197.1	TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: pjd:Pjdr2_2312 deoxyxylulose-5-phosphate synthase
YP_003242198.1	KEGG: pjd:Pjdr2_2313 hemolysin A; TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_003242199.1	KEGG: pjd:Pjdr2_2314 hypothetical protein
YP_003242200.1	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes
YP_003242201.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: pjd:Pjdr2_2316 DNA repair protein RecN
YP_003242202.1	KEGG: pjd:Pjdr2_2317 stage IV sporulation protein B; TIGRFAM: stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB
YP_003242203.1	KEGG: pjd:Pjdr2_2318 sporulation transcriptional activator Spo0A; TIGRFAM: sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver
YP_003242204.1	PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein ArsR; KEGG: bha:BH1869 hypothetical protein
YP_003242205.1	PFAM: extracellular solute-binding protein family 1; KEGG: tle:Tlet_1578 extracellular solute-binding protein
YP_003242206.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4063 binding-protein-dependent transport systems inner membrane component
YP_003242207.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_0646 binding-protein-dependent transport systems inner membrane component
YP_003242208.1	PFAM: glycoside hydrolase family 43; KEGG: bha:BH1867 hypothetical protein
YP_003242209.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: bbe:BBR47_36740 hypothetical protein
YP_003242211.1	KEGG: pjd:Pjdr2_2319 hypothetical protein
YP_003242212.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: pjd:Pjdr2_2320 dihydrolipoamide dehydrogenase
YP_003242213.1	PFAM: dehydrogenase E1 component; KEGG: pjd:Pjdr2_2321 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
YP_003242214.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: pjd:Pjdr2_2322 transketolase central region
YP_003242215.1	PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: gka:GK2376 branched-chain alpha-keto acid dehydrogenase subunit E2
YP_003242216.1	KEGG: pjd:Pjdr2_2324 lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase
YP_003242218.1	TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M42 family protein; KEGG: pjd:Pjdr2_2325 peptidase T-like protein
YP_003242221.1	PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_2327 NUDIX hydrolase
YP_003242222.1	KEGG: bbe:BBR47_23770 hypothetical protein
YP_003242223.1	TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: pjd:Pjdr2_2328 stage II sporulation protein M
YP_003242224.1	PFAM: ferric-uptake regulator; KEGG: pjd:Pjdr2_2329 ferric uptake regulator, Fur family
YP_003242225.1	KEGG: pjd:Pjdr2_2332 hypothetical protein
YP_003242226.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bbe:BBR47_23810 probable tyrosine recombinase
YP_003242227.1	TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; KEGG: pjd:Pjdr2_2335 purine nucleoside phosphorylase I, inosine and guanosine-specific
YP_003242228.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: pjd:Pjdr2_2338 serine-type D-Ala-D-Ala carboxypeptidase
YP_003242229.1	TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pjd:Pjdr2_2339 anti-sigma-factor antagonist
YP_003242230.1	KEGG: pjd:Pjdr2_2340 anti-sigma regulatory factor, serine/threonine protein kinase; TIGRFAM: anti-sigma F factor; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_003242231.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.
YP_003242232.1	KEGG: pjd:Pjdr2_2344 stage V sporulation protein AA
YP_003242233.1	KEGG: pjd:Pjdr2_2345 stage V sporulation protein AB
YP_003242234.1	PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_2346 GerA spore germination protein
YP_003242235.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pjd:Pjdr2_2347 diaminopimelate decarboxylase
YP_003242236.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: pjd:Pjdr2_2348 peptidyl-prolyl cis-trans isomerase cyclophilin type
YP_003242237.1	PFAM: thioesterase superfamily protein; KEGG: pjd:Pjdr2_1358 thioesterase superfamily protein
YP_003242238.1	KEGG: pjd:Pjdr2_2349 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding
YP_003242239.1	KEGG: pjd:Pjdr2_2350 riboflavin synthase, alpha subunit; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein
YP_003242240.1	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: afl:Aflv_1017 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein
YP_003242241.1	KEGG: bha:BH1557 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase
YP_003242242.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: pjd:Pjdr2_2353 chromosome segregation and condensation protein ScpA
YP_003242243.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: pjd:Pjdr2_2354 chromosome segregation and condensation protein, ScpB
YP_003242244.1	KEGG: pjd:Pjdr2_2358 hypothetical protein
YP_003242245.1	TIGRFAM: sporulation protein YtfJ; PFAM: Sporulation protein YtfJ; KEGG: pjd:Pjdr2_2359 sporulation protein YtfJ
YP_003242246.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; KEGG: pjd:Pjdr2_2360 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
YP_003242247.1	PFAM: nucleoside recognition domain protein; KEGG: pjd:Pjdr2_2361 nucleoside recognition domain protein
YP_003242248.1	PFAM: nucleoside recognition domain protein; KEGG: pjd:Pjdr2_2362 nucleoside recognition domain protein
YP_003242250.1	PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: pjd:Pjdr2_2363 pseudouridine synthase
YP_003242251.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pjd:Pjdr2_2364 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003242252.1	PFAM: ResB family protein; KEGG: pjd:Pjdr2_2365 ResB family protein
YP_003242253.1	TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: pjd:Pjdr2_2366 cytochrome c-type biogenesis protein CcsB
YP_003242254.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pjd:Pjdr2_2367 two component transcriptional regulator, winged helix family
YP_003242255.1	PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_2368 histidine kinase
YP_003242256.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_003242257.1	PFAM: Abortive infection protein; KEGG: pjd:Pjdr2_2373 abortive infection protein
YP_003242258.1	KEGG: SRP35; SR protein factor
YP_003242259.1	PFAM: metallophosphoesterase; KEGG: afl:Aflv_1064 calcineurin-like phosphohydrolase
YP_003242260.1	PFAM: polysaccharide deacetylase; KEGG: pjd:Pjdr2_2375 polysaccharide deacetylase
YP_003242262.1	enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence
YP_003242263.1	KEGG: pjd:Pjdr2_2379 hypothetical protein
YP_003242264.1	KEGG: pjd:Pjdr2_2380 hypothetical protein
YP_003242265.1	TIGRFAM: germination protein YpeB; PFAM: Propeptide PepSY amd peptidase M4; KEGG: pjd:Pjdr2_2381 germination protein YpeB
YP_003242267.1	PFAM: type IV pilus assembly PilZ; KEGG: pjd:Pjdr2_2382 type IV pilus assembly PilZ
YP_003242269.1	TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: pjd:Pjdr2_2384 cytidylate kinase
YP_003242270.1	PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: pjd:Pjdr2_2385 1-acyl-sn-glycerol-3-phosphate acyltransferase
YP_003242271.1	PFAM: RNA binding S1 domain protein; KEGG: pjd:Pjdr2_2386 RNA binding S1 domain protein
YP_003242272.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_003242273.1	PFAM: protein of unknown function DUF205; KEGG: pjd:Pjdr2_2391 protein of unknown function DUF205
YP_003242274.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; KEGG: pjd:Pjdr2_2392 glycerol-3-phosphate dehydrogenase (NAD(P)(+))
YP_003242275.1	KEGG: pjd:Pjdr2_2393 hypothetical protein
YP_003242276.1	KEGG: pjd:Pjdr2_2394 hypothetical protein
YP_003242277.1	KEGG: pjd:Pjdr2_2396 hypothetical protein
YP_003242278.1	PFAM: ferredoxin; KEGG: bbe:BBR47_24550 hypothetical protein
YP_003242279.1	KEGG: pjd:Pjdr2_2398 hypothetical protein
YP_003242280.1	TIGRFAM: stage IV sporulation protein A; PFAM: Sporulation stage IV protein A; KEGG: pjd:Pjdr2_2399 stage IV sporulation protein A
YP_003242281.1	PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: gwc:GWCH70_2154 histone family protein DNA-binding protein
YP_003242282.1	tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination
YP_003242283.1	PFAM: DoxX family protein; KEGG: bbe:BBR47_51280 hypothetical protein
YP_003242284.1	catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate
YP_003242285.1	KEGG: pjd:Pjdr2_2405 hypothetical protein
YP_003242286.1	KEGG: pjd:Pjdr2_2406 hypothetical protein
YP_003242287.1	PFAM: transposase IS4 family protein; KEGG: amt:Amet_0304 transposase, IS4 family protein
YP_003242288.1	TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: pjd:Pjdr2_2408 4-hydroxybenzoate polyprenyltransferase
YP_003242289.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: pjd:Pjdr2_2409 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_003242290.1	PFAM: Polyprenyl synthetase; KEGG: pjd:Pjdr2_2411 trans-hexaprenyltranstransferase
YP_003242291.1	KEGG: pjd:Pjdr2_2412 nucleoside-diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase
YP_003242292.1	KEGG: bbe:BBR47_24690 chemotaxis protein methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type
YP_003242293.1	KEGG: bbe:BBR47_24700 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase
YP_003242294.1	TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; KEGG: pjd:Pjdr2_2415 3-dehydroquinate synthase
YP_003242295.1	TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: pjd:Pjdr2_2416 chorismate mutase
YP_003242296.1	KEGG: pjd:Pjdr2_2417 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein
YP_003242297.1	TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; KEGG: pjd:Pjdr2_2418 anthranilate phosphoribosyltransferase
YP_003242298.1	PFAM: Indole-3-glycerol phosphate synthase; KEGG: pjd:Pjdr2_2419 indole-3-glycerol-phosphate synthase
YP_003242299.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: bbe:BBR47_24760 N-(5'-phosphoribosyl)anthranilate isomerase
YP_003242300.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_003242301.1	KEGG: pjd:Pjdr2_2422 tryptophan synthase, alpha subunit; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain
YP_003242302.1	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: pjd:Pjdr2_2423 histidinol-phosphate aminotransferase
YP_003242303.1	PFAM: Prephenate dehydrogenase; amino acid-binding ACT domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pjd:Pjdr2_2424 prephenate dehydrogenase
YP_003242304.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: pjd:Pjdr2_2425 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003242305.1	KEGG: pjd:Pjdr2_2426 hypothetical protein
YP_003242306.1	PFAM: Phosphoglycerate mutase; KEGG: pjd:Pjdr2_2427 phosphoglycerate mutase
YP_003242307.1	PFAM: Methyltransferase type 11; KEGG: bcr:BCAH187_A3106 methyltransferase domain family
YP_003242308.1	KEGG: pjd:Pjdr2_2428 hypothetical protein
YP_003242309.1	PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_2429 hypothetical protein
YP_003242310.1	KEGG: pjd:Pjdr2_2430 hypothetical protein
YP_003242311.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pjd:Pjdr2_2431 Rieske (2Fe-2S) domain protein
YP_003242312.1	electron transport protein
YP_003242313.1	PFAM: cytochrome c class I; KEGG: pjd:Pjdr2_2433 cytochrome c class I
YP_003242314.1	PFAM: protein of unknown function DUF1405; KEGG: pjd:Pjdr2_2434 protein of unknown function DUF1405
YP_003242315.1	KEGG: pjd:Pjdr2_2435 hypothetical protein
YP_003242316.1	PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: pjd:Pjdr2_2436 protein of unknown function DUF161
YP_003242317.1	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bbe:BBR47_24950 hypothetical protein
YP_003242318.1	KEGG: pjd:Pjdr2_2439 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; Semialdehyde dehydrogenase NAD - binding
YP_003242319.1	KEGG: pjd:Pjdr2_2440 methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein
YP_003242320.1	PFAM: LmbE family protein; KEGG: pjd:Pjdr2_2441 LmbE family protein
YP_003242321.1	PFAM: glycosyl transferase group 1; KEGG: pjd:Pjdr2_2442 glycosyl transferase group 1
YP_003242322.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: pjd:Pjdr2_2443 polynucleotide adenylyltransferase region
YP_003242323.1	KEGG: pjd:Pjdr2_2444 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; biotin protein ligase domain protein
YP_003242324.1	KEGG: pjd:Pjdr2_2445 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_003242325.1	KEGG: bbe:BBR47_25030 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase
YP_003242326.1	KEGG: pjd:Pjdr2_2447 aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase
YP_003242327.1	KEGG: pjd:Pjdr2_2448 tetratricopeptide domain protein
YP_003242328.1	KEGG: pjd:Pjdr2_2449 DnaQ family exonuclease/DinG family helicase; TIGRFAM: DnaQ family exonuclease/DinG family helicase; DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: helicase c2; Exonuclease; DEAD-like helicase
YP_003242329.1	modulates transcription in response to the NADH/NAD(+) redox state
YP_003242330.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pjd:Pjdr2_2451 amidohydrolase
YP_003242331.1	KEGG: hypothetical protein
YP_003242332.1	KEGG: pjd:Pjdr2_2453 hypothetical protein
YP_003242333.1	KEGG: pjd:Pjdr2_2454 vesicle-fusing ATPase; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase
YP_003242334.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pjd:Pjdr2_2455 3-hydroxybutyryl-CoA dehydrogenase
YP_003242335.1	TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: pjd:Pjdr2_2456 acetate kinase
YP_003242336.1	TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bbe:BBR47_25160 asparaginyl-tRNA synthetase
YP_003242337.1	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: pjd:Pjdr2_2457 primosome, DnaD subunit
YP_003242338.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bbe:BBR47_47660 RNA polymerase ECF-type sigma factor
YP_003242340.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_2993 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_003242341.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pfl:PFL_0048 HAD family hydrolase
YP_003242342.1	KEGG: bsu:BSU26900 hypothetical protein
YP_003242343.1	PFAM: aminoglycoside phosphotransferase; KEGG: hypothetical protein
YP_003242344.1	PFAM: Abortive infection protein; KEGG: rde:RD1_0329 CAAX amino terminal protease family protein, putative
YP_003242346.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pjd:Pjdr2_0120 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003242347.1	KEGG: bca:BCE_1860 hypothetical protein
YP_003242348.1	KEGG: bwe:BcerKBAB4_1653 hypothetical protein
YP_003242350.1	KEGG: bay:RBAM_008670 YfhL
YP_003242351.1	TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; KEGG: pjd:Pjdr2_2463 methylthioribulose-1-phosphate dehydratase
YP_003242352.1	converts 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate to 1,2-dihydroxy-3-keto-5-methylthiopentene; involved in methionine salvage
YP_003242353.1	converts 2,3-diketo-5-methylthiopentyl-1-phosphate into 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate; involved in methionine salvage
YP_003242354.1	KEGG: pjd:Pjdr2_2466 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_003242355.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_003242356.1	KEGG: pjd:Pjdr2_2468 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein
YP_003242357.1	PFAM: aminotransferase class I and II; KEGG: pjd:Pjdr2_2469 aminotransferase class I and II
YP_003242358.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pjd:Pjdr2_2471 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_003242360.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_2472 transcriptional regulator, LysR family
YP_003242361.1	TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; KEGG: pjd:Pjdr2_2473 3-isopropylmalate dehydratase, large subunit
YP_003242362.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_003242363.1	KEGG: pjd:Pjdr2_2475 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; SMART: cell wall hydrolase/autolysin
YP_003242364.1	PFAM: Lipoprotein LpqB, GerMN domain; KEGG: bbe:BBR47_04730 hypothetical protein
YP_003242365.1	KEGG: pjd:Pjdr2_2475 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; SMART: cell wall hydrolase/autolysin
YP_003242366.1	PFAM: Lipoprotein LpqB, GerMN domain; KEGG: bbe:BBR47_04730 hypothetical protein
YP_003242367.1	PFAM: S-layer domain protein; KEGG: pjd:Pjdr2_2477 S-layer domain protein
YP_003242368.1	KEGG: pjd:Pjdr2_2478 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop
YP_003242369.1	KEGG: pjd:Pjdr2_2479 hypothetical protein
YP_003242370.1	PFAM: Dynamin family protein; GTP-binding protein HSR1-related; KEGG: pjd:Pjdr2_2480 dynamin family protein
YP_003242371.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2489 ABC transporter transmembrane region
YP_003242372.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2490 ABC transporter related
YP_003242373.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_3531 acetyltransferase
YP_003242374.1	PFAM: SCP-like extracellular; KEGG: bbe:BBR47_30760 hypothetical protein
YP_003242375.1	PFAM: lipolytic protein G-D-S-L family; KEGG: pjd:Pjdr2_3233 lipolytic protein G-D-S-L family
YP_003242376.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_3234 ABC transporter related
YP_003242377.1	KEGG: pjd:Pjdr2_3235 hypothetical protein
YP_003242378.1	KEGG: pjd:Pjdr2_2492 DNA topoisomerase IV, B subunit; TIGRFAM: DNA topoisomerase IV, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein
YP_003242379.1	KEGG: pjd:Pjdr2_2493 DNA gyrase, A subunit; TIGRFAM: DNA topoisomerase IV, A subunit; DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A
YP_003242380.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pjd:Pjdr2_2495 transcriptional regulator, MarR family
YP_003242381.1	PFAM: chitin-binding domain 3 protein; Fibronectin type III domain protein; Carbohydrate-binding family V/XII; SMART: Fibronectin type III domain protein; Carbohydrate-binding family V/XII; KEGG: bbe:BBR47_56840 hypothetical protein
YP_003242382.1	PFAM: pseudouridine synthase; KEGG: cth:Cthe_0278 ribosomal large subunit pseudouridine synthase D
YP_003242383.1	KEGG: pjd:Pjdr2_2498 hypothetical protein
YP_003242384.1	PFAM: GCN5-related N-acetyltransferase; KEGG: lin:lin1847 hypothetical protein
YP_003242385.1	PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; KEGG: bbe:BBR47_39630 MutS2 family protein
YP_003242386.1	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: bbe:BBR47_26630 peptidase M3B family protein
YP_003242387.1	KEGG: mac:MA3368 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein
YP_003242388.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ent:Ent638_3304 hypothetical protein
YP_003242389.1	KEGG: bbe:BBR47_08940 hypothetical protein
YP_003242390.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbe:BBR47_21310 hypothetical protein
YP_003242391.1	PFAM: regulatory protein TetR; KEGG: bbe:BBR47_21300 probable transcriptional regulator
YP_003242392.1	KEGG: bld:BLi03582 hypothetical protein
YP_003242393.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_0652 aldo/keto reductase
YP_003242394.1	PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: pjd:Pjdr2_0653 oxidoreductase domain protein
YP_003242395.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_0654 transcriptional regulator, AraC family
YP_003242396.1	KEGG: cby:CLM_1907 hypothetical protein
YP_003242397.1	KEGG: pjd:Pjdr2_4628 hypothetical protein
YP_003242398.1	PFAM: Protein of unkown function DUF1796 putative papain-like cysteine peptidase; KEGG: bcg:BCG9842_B1706 hypothetical protein
YP_003242399.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pjd:Pjdr2_0258 MATE efflux family protein
YP_003242400.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: afl:Aflv_0303 multidomain redox protein (NAD(FAD)-dependent oxidoreductase; rhodanese domain; SirA-like redox domain; peroxiredoxin domain)
YP_003242401.1	PFAM: protein of unknown function DUF156; KEGG: oih:OB2653 hypothetical protein
YP_003242402.1	PFAM: SirA family protein; KEGG: bay:RBAM_005470 YrkI
YP_003242403.1	KEGG: bay:RBAM_005430 YrkE
YP_003242404.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gwc:GWCH70_0563 rhodanese domain protein
YP_003242405.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gtn:GTNG_1980 molybdopterin biosynthesis MoeB protein-like protein
YP_003242406.1	PFAM: SirA family protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gwc:GWCH70_0565 SirA family protein
YP_003242407.1	PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: bpu:BPUM_0193 zinc (Zn) dependent hydrolase
YP_003242408.1	PFAM: protein of unknown function DUF81; KEGG: gtn:GTNG_1977 hypothetical protein
YP_003242409.1	PFAM: Tellurite resistance methyltransferase, TehB, core; KEGG: bld:BLi02003 hypothetical protein
YP_003242410.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_0547 transcriptional regulator, AraC family
YP_003242411.1	PFAM: sulfatase; KEGG: pjd:Pjdr2_0548 sulfatase
YP_003242412.1	PFAM: protein of unknown function DUF323; KEGG: pjd:Pjdr2_0960 non-specific serine/threonine protein kinase
YP_003242413.1	PFAM: aminoglycoside phosphotransferase; KEGG: pjd:Pjdr2_2670 aminoglycoside phosphotransferase
YP_003242414.1	KEGG: pjd:Pjdr2_3647 hypothetical protein
YP_003242415.1	PFAM: formate/nitrite transporter; KEGG: bld:BLi04135 YwcJ
YP_003242416.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_2513 GCN5-related N-acetyltransferase
YP_003242417.1	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: bbe:BBR47_31730 hypothetical protein
YP_003242418.1	KEGG: bbe:BBR47_58300 hypothetical protein
YP_003242419.1	PFAM: regulatory protein TetR; KEGG: bbe:BBR47_58290 probable transcriptional regulator
YP_003242420.1	KEGG: bcg:BCG9842_B0469 hypothetical protein
YP_003242421.1	KEGG: bpu:BPUM_2514 hypothetical protein
YP_003242422.1	KEGG: pjd:Pjdr2_2592 hypothetical protein
YP_003242423.1	KEGG: pjd:Pjdr2_2593 import inner membrane translocase subunit Tim44
YP_003242424.1	PFAM: transcriptional regulator PadR family protein; KEGG: npu:Npun_R4739 PadR-like family transcriptional regulator
YP_003242425.1	PFAM: carbonic anhydrase; Carbonic anhydrase, YbcF-related; KEGG: pjd:Pjdr2_2595 carbonic anhydrase
YP_003242426.1	KEGG: gtn:GTNG_2256 hypothetical protein
YP_003242427.1	PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: pjd:Pjdr2_2597 carboxypeptidase Taq
YP_003242428.1	KEGG: pjd:Pjdr2_2598 ABC transporter substrate-binding protein
YP_003242429.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2599 ABC transporter related
YP_003242430.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2600 binding-protein-dependent transport systems inner membrane component
YP_003242431.1	PFAM: protein of unknown function DUF939; KEGG: pjd:Pjdr2_2601 protein of unknown function DUF939
YP_003242432.1	PFAM: Spore coat protein CotE; KEGG: pjd:Pjdr2_2602 outer spore coat protein
YP_003242433.1	KEGG: pjd:Pjdr2_2603 hypothetical protein
YP_003242434.1	KEGG: pjd:Pjdr2_2606 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein
YP_003242435.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_2607 DNA mismatch repair protein MutL
YP_003242436.1	PFAM: protein of unknown function DUF548; KEGG: pjd:Pjdr2_2608 protein of unknown function DUF548
YP_003242437.1	KEGG: pjd:Pjdr2_2609 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_003242438.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: pjd:Pjdr2_2610 RNA chaperone Hfq
YP_003242439.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: pjd:Pjdr2_2611 penicillin-binding protein, 1A family
YP_003242440.1	PFAM: protein of unknown function DUF402; KEGG: pjd:Pjdr2_2613 protein of unknown function DUF402
YP_003242441.1	PFAM: protein of unknown function DUF218; KEGG: pjd:Pjdr2_2614 protein of unknown function DUF218
YP_003242442.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2615 AAA ATPase central domain protein
YP_003242443.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: pjd:Pjdr2_2616 GTP-binding proten HflX
YP_003242444.1	PFAM: Aluminium resistance family protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: pjd:Pjdr2_2617 aluminium resistance family protein
YP_003242445.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pjd:Pjdr2_2618 transcriptional regulator, MerR family
YP_003242446.1	KEGG: pjd:Pjdr2_2619 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp
YP_003242447.1	KEGG: lsp:Bsph_3054 hypothetical protein
YP_003242448.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pjd:Pjdr2_5371 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003242449.1	KEGG: pjd:Pjdr2_2999 hypothetical protein
YP_003242450.1	KEGG: pjd:Pjdr2_2621 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region
YP_003242451.1	PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: rxy:Rxyl_0857 peptidoglycan-binding LysM
YP_003242452.1	PFAM: protein of unknown function DUF896; KEGG: pjd:Pjdr2_2623 protein of unknown function DUF896
YP_003242453.1	KEGG: pjd:Pjdr2_2624 hypothetical protein
YP_003242454.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_2625 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_003242455.1	KEGG: gtn:GTNG_0857 hypothetical protein
YP_003242456.1	PFAM: Acireductone dioxygenase ARD; KEGG: pjd:Pjdr2_2626 acireductone dioxygenase ARD
YP_003242457.1	TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; dihydropteroate synthase DHPS; Vitamin B12 dependent methionine synthase activation region; KEGG: pjd:Pjdr2_2627 methionine synthase
YP_003242458.1	KEGG: bpu:BPUM_2115 ribonuclease Z; TIGRFAM: ribonuclease Z; PFAM: beta-lactamase domain protein
YP_003242459.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_2632 HAD-superfamily subfamily IIA hydrolase like protein
YP_003242460.1	PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; zinc finger Fpg domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: pjd:Pjdr2_2633 DNA-(apurinic or apyrimidinic site) lyase
YP_003242461.1	KEGG: bbe:BBR47_21870 putative endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2
YP_003242462.1	KEGG: pjd:Pjdr2_2635 hypothetical protein
YP_003242463.1	KEGG: eat:EAT1b_0810 putative thioredoxin
YP_003242464.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gtn:GTNG_1524 ABC transporter ATP-binding protein
YP_003242465.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pjd:Pjdr2_2636 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_003242466.1	PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: pjd:Pjdr2_2637 serine/threonine protein kinase
YP_003242467.1	PFAM: SAF domain protein; KEGG: lsp:Bsph_p184 hypothetical protein
YP_003242468.1	KEGG: lsp:Bsph_p183 hypothetical protein
YP_003242469.1	KEGG: hypothetical protein
YP_003242470.1	KEGG: cpy:Cphy_0837 AAA ATPase
YP_003242471.1	KEGG: lsp:Bsph_p180 hypothetical protein
YP_003242472.1	KEGG: lsp:Bsph_p179 hypothetical protein
YP_003242474.1	KEGG: lsp:Bsph_p177 hypothetical protein
YP_003242475.1	KEGG: lsp:Bsph_p176 hypothetical protein
YP_003242476.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_0572 ABC transporter related
YP_003242477.1	PFAM: aminoglycoside phosphotransferase; KEGG: sme:SM_b20505 putative trifolitoxin immunity protein
YP_003242478.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bca:BCE_0803 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein
YP_003242479.1	PFAM: APHP domain protein; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; Parallel beta-helix repeat; KEGG: pjd:Pjdr2_3616 APHP domain protein
YP_003242480.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ate:Athe_0280 two component transcriptional regulator, winged helix family
YP_003242481.1	PFAM: NLP/P60 protein; KEGG: bbe:BBR47_42800 hypothetical protein
YP_003242482.1	TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: drm:Dred_3202 thiamine pyrophosphokinase
YP_003242483.1	PFAM: protein of unknown function UPF0126; KEGG: pjd:Pjdr2_2647 protein of unknown function UPF0126
YP_003242484.1	PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: gwc:GWCH70_0416 protein tyrosine phosphatase
YP_003242485.1	PFAM: putative esterase; KEGG: pjd:Pjdr2_2649 putative esterase
YP_003242486.1	KEGG: pjd:Pjdr2_2650 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component
YP_003242487.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: pjd:Pjdr2_2651 transketolase central region
YP_003242488.1	PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: pjd:Pjdr2_2652 catalytic domain of components of various dehydrogenase complexes
YP_003242489.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: pjd:Pjdr2_2653 dihydrolipoamide dehydrogenase
YP_003242490.1	KEGG: stm:STM3001 thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: thymidylate synthase
YP_003242491.1	PFAM: dihydrofolate reductase region; KEGG: cce:Ccel_1310 dihydrofolate reductase region
YP_003242492.1	TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pjd:Pjdr2_2657 glutamate synthase, NADH/NADPH, small subunit
YP_003242493.1	KEGG: pjd:Pjdr2_2660 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein
YP_003242494.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_2661 haloacid dehalogenase domain protein hydrolase
YP_003242495.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH3212 hypothetical protein
YP_003242496.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_48820 hypothetical protein
YP_003242497.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2664 ABC transporter related
YP_003242498.1	KEGG: bbe:BBR47_04100 hypothetical protein
YP_003242499.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: btk:BT9727_1806 alkaline phosphatase synthesis response regulator
YP_003242500.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bbe:BBR47_04080 two-component sensor histidine kinase
YP_003242501.1	PFAM: GCN5-related N-acetyltransferase; KEGG: lin:lin0655 hypothetical protein
YP_003242502.1	TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pjd:Pjdr2_1042 nucleotidyl transferase
YP_003242503.1	KEGG: pjd:Pjdr2_1043 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_003242504.1	TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; KEGG: gtn:GTNG_2779 glycogen synthase
YP_003242505.1	PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: pjd:Pjdr2_1045 alpha amylase catalytic region
YP_003242506.1	KEGG: lmo:lmo2250 hypothetical protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3
YP_003242507.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbe:Cbei_4779 ABC transporter related
YP_003242508.1	PFAM: 3D domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: pjd:Pjdr2_4889 3D domain protein
YP_003242509.1	PFAM: polysaccharide deacetylase; KEGG: pjd:Pjdr2_4888 polysaccharide deacetylase
YP_003242510.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bbe:BBR47_04320 NADPH dehydrogenase
YP_003242511.1	PFAM: PspA/IM30 family protein; KEGG: pjd:Pjdr2_5346 phage shock protein A, PspA
YP_003242512.1	KEGG: bbe:BBR47_37920 hypothetical protein
YP_003242513.1	KEGG: pjd:Pjdr2_5348 hypothetical protein
YP_003242514.1	KEGG: bbe:BBR47_37900 hypothetical protein
YP_003242515.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: bld:BLi01641 hypothetical protein
YP_003242516.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: bbe:BBR47_11390 probable molybdopterin-guanine dinucleotide biosynthesis protein B
YP_003242517.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerS
YP_003242518.1	KEGG: amr:AM1_2012 hypothetical protein
YP_003242519.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: gka:GK1612 dehydrogenase
YP_003242520.1	PFAM: aldo/keto reductase; KEGG: aac:Aaci_2415 aldo/keto reductase
YP_003242521.1	PFAM: coagulation factor 5/8 type domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: pjd:Pjdr2_0680 S-layer domain protein
YP_003242522.1	PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bcl:ABC3582 hypothetical protein
YP_003242523.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5072 binding-protein-dependent transport systems inner membrane component
YP_003242524.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1251 protein LplC
YP_003242525.1	PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_1773 extracellular solute-binding protein
YP_003242526.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_0894 histidine kinase
YP_003242527.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: cbe:Cbei_4431 response regulator receiver protein
YP_003242528.1	PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_3858 extracellular solute-binding protein
YP_003242529.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_3859 binding-protein-dependent transport systems inner membrane component
YP_003242530.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_3860 binding-protein-dependent transport systems inner membrane component
YP_003242531.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: bai:BAA_1913 putative dehydrogenase
YP_003242532.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: eat:EAT1b_1327 transcriptional regulator, MarR family
YP_003242533.1	KEGG: bsu:BSU36620 hypothetical protein
YP_003242534.1	KEGG: pjd:Pjdr2_2268 hypothetical protein
YP_003242535.1	PFAM: Spore germination protein gerPA/gerPF; KEGG: pjd:Pjdr2_2267 spore germination protein
YP_003242536.1	KEGG: pjd:Pjdr2_2266 spore germination protein
YP_003242537.1	KEGG: bay:RBAM_010870 GerPC
YP_003242538.1	KEGG: gwc:GWCH70_0676 spore germination protein GerPD
YP_003242539.1	KEGG: gtn:GTNG_0593 spore germination protein GerPE
YP_003242540.1	TIGRFAM: small, acid-soluble spore protein tlp; KEGG: bbe:BBR47_31410 small acid-soluble spore protein
YP_003242541.1	KEGG: tte:TTE0433 hypothetical protein
YP_003242542.1	KEGG: pjd:Pjdr2_5244 hypothetical protein
YP_003242543.1	PFAM: Protein of unknown function DUF2500; KEGG: aoe:Clos_1149 hypothetical protein
YP_003242544.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gtn:GTNG_0872 short chain alcohol dehydrogenase
YP_003242545.1	PFAM: coagulation factor 5/8 type domain protein; Carbohydrate-binding CenC domain protein; Ig domain protein group 2 domain protein; KEGG: bcv:Bcav_3390 coagulation factor 5/8 type domain protein
YP_003242546.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3656 transcriptional regulator, AraC family
YP_003242547.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5852 extracellular solute-binding protein family 1
YP_003242548.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3654 binding-protein-dependent transport systems inner membrane component
YP_003242549.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5850 binding-protein-dependent transport systems inner membrane component
YP_003242550.1	PFAM: glycosyl hydrolase family 88; KEGG: pjd:Pjdr2_0649 glycosyl hydrolase family 88
YP_003242551.1	PFAM: copper resistance protein CopC; KEGG: pjd:Pjdr2_4361 copper resistance protein CopC
YP_003242552.1	PFAM: copper resistance D domain protein; KEGG: pjd:Pjdr2_4362 putative copper export protein-like protein
YP_003242553.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_2985 transcriptional regulator, AraC family
YP_003242554.1	PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: pjd:Pjdr2_2986 alpha-L-rhamnosidase
YP_003242555.1	PFAM: cell wall hydrolase SleB; KEGG: bbe:BBR47_15960 cell wall hydrolase
YP_003242556.1	TIGRFAM: spore coat protein GerQ; PFAM: Spore coat protein GerQ; KEGG: pjd:Pjdr2_4878 spore coat protein GerQ
YP_003242557.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: pjd:Pjdr2_4360 protein of unknown function DUF21
YP_003242558.1	KEGG: pth:PTH_1565 hypothetical protein
YP_003242559.1	KEGG: hypothetical protein
YP_003242560.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: hypothetical protein
YP_003242561.1	PFAM: peptidase M29 aminopeptidase II; KEGG: bcy:Bcer98_0308 peptidase M29 aminopeptidase II
YP_003242562.1	PFAM: peptidase M29 aminopeptidase II; KEGG: bha:BH2245 aminopeptidase
YP_003242563.1	KEGG: pjd:Pjdr2_3332 hypothetical protein
YP_003242564.1	KEGG: pjd:Pjdr2_1360 potassium uptake protein, TrkH family; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter
YP_003242565.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pjd:Pjdr2_0755 protein of unknown function DUF6 transmembrane
YP_003242566.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: gka:GK0938 alcohol dehydrogenase
YP_003242568.1	PFAM: AzlC family protein; KEGG: bbe:BBR47_09830 hypothetical protein
YP_003242569.1	PFAM: branched-chain amino acid transport; KEGG: pjd:Pjdr2_2953 branched-chain amino acid transport
YP_003242570.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pjd:Pjdr2_4159 NAD-dependent epimerase/dehydratase
YP_003242571.1	PFAM: sulfatase; KEGG: pjd:Pjdr2_1197 sulfatase
YP_003242572.1	catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine
YP_003242573.1	KEGG: hypothetical protein
YP_003242574.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bcy:Bcer98_2029 hypothetical protein
YP_003242575.1	KEGG: bld:BLi02130 YngD
YP_003242576.1	KEGG: bcu:BCAH820_B0276 transcriptional regulator, ArsR family protein
YP_003242577.1	TIGRFAM: cytochrome aa3 quinol oxidase, subunit IV; KEGG: lsp:Bsph_3988 cytochrome aa3 quinol oxidase subunit IV
YP_003242578.1	TIGRFAM: cytochrome aa3 quinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: lsp:Bsph_3987 quinol oxidase subunit 3
YP_003242579.1	KEGG: gka:GK3458 cytochrome aa3 quinol oxidase subunit I; TIGRFAM: cytochrome aa3 quinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_003242580.1	TIGRFAM: quinol oxidase AA3, subunit II; KEGG: lsp:Bsph_3984 quinol oxidase subunit 2 precursor
YP_003242581.1	PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bbe:BBR47_49100 probable transcriptional regulator
YP_003242582.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bbe:BBR47_49110 hypothetical protein
YP_003242583.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_4723 xylose isomerase domain protein TIM barrel
YP_003242584.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: ate:Athe_2618 ABC transporter related
YP_003242585.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_0521 ABC transporter related
YP_003242586.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bwe:BcerKBAB4_4690 serine-type D-Ala-D-Ala carboxypeptidase
YP_003242587.1	PFAM: VanZ family protein; KEGG: pjd:Pjdr2_1737 VanZ family protein
YP_003242588.1	KEGG: bbe:BBR47_03180 hypothetical protein
YP_003242589.1	PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi00365 NasA
YP_003242590.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pjd:Pjdr2_2175 nitrite reductase (NAD(P)H), large subunit
YP_003242591.1	PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: pjd:Pjdr2_2176 molybdopterin oxidoreductase
YP_003242592.1	PFAM: histidine triad (HIT) protein; KEGG: bwe:BcerKBAB4_2587 histidine triad (HIT) protein
YP_003242593.1	KEGG: bca:BCE_2812 hypothetical protein
YP_003242594.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: cbl:CLK_1620 hypothetical protein
YP_003242595.1	KEGG: pjd:Pjdr2_2869 hypothetical protein
YP_003242596.1	PFAM: aminoglycoside phosphotransferase; KEGG: pjd:Pjdr2_4936 aminoglycoside phosphotransferase
YP_003242597.1	PFAM: Domain of unknown function DUF1904; KEGG: gme:Gmet_0360 hypothetical protein
YP_003242598.1	PFAM: aminoglycoside phosphotransferase; KEGG: bbe:BBR47_13300 hypothetical protein
YP_003242599.1	PFAM: Glycosyl transferase, family 4, conserved region; KEGG: pjd:Pjdr2_3699 phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_003242601.1	PFAM: 5-nucleotidase; KEGG: lwe:lwe0283 5'-nucleotidase, putative
YP_003242602.1	KEGG: bld:BLi03150 YncE
YP_003242603.1	KEGG: bcl:ABC0288 topology modulation protein
YP_003242604.1	KEGG: lbf:LBF_2151 hypothetical protein
YP_003242606.1	KEGG: cbk:CLL_A1648 hypothetical protein
YP_003242607.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rer:RER_34750 hypothetical protein
YP_003242609.1	KEGG: cbi:CLJ_B0995 hypothetical protein
YP_003242610.1	PFAM: GCN5-related N-acetyltransferase; KEGG: lsp:Bsph_2746 acetyltransferase
YP_003242611.1	KEGG: cpy:Cphy_2576 acetyltransferase
YP_003242613.1	KEGG: bcg:BCG9842_B3069 YwbB
YP_003242615.1	KEGG: mac:MA2036 hypothetical protein
YP_003242616.1	KEGG: btl:BALH_2328 hypothetical protein
YP_003242617.1	KEGG: cpr:CPR_0876 hypothetical protein
YP_003242618.1	PFAM: NUDIX hydrolase; KEGG: aoe:Clos_2044 NUDIX hydrolase
YP_003242619.1	KEGG: bcq:BCQ_3050 hypothetical protein
YP_003242620.1	KEGG: pjd:Pjdr2_3267 hypothetical protein
YP_003242623.1	PFAM: Chloramphenicol phosphotransferase family protein; KEGG: cpy:Cphy_2503 chloramphenicol phosphotransferase family protein
YP_003242624.1	KEGG: bbe:BBR47_07270 hypothetical protein
YP_003242625.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_2639 acetyltransferase
YP_003242626.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ter:Tery_4634 GCN5-related N-acetyltransferase
YP_003242627.1	KEGG: bwe:BcerKBAB4_2890 hypothetical protein
YP_003242629.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbe:BBR47_46880 hypothetical protein
YP_003242630.1	PFAM: NUDIX hydrolase; KEGG: aoe:Clos_2044 NUDIX hydrolase
YP_003242631.1	PFAM: aminoglycoside phosphotransferase; KEGG: oih:OB1175 hypothetical protein
YP_003242632.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: lsp:Bsph_3165 putative transport protein
YP_003242633.1	TIGRFAM: small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor G domain IV; KEGG: bcl:ABC3726 tetracycline resistance protein
YP_003242634.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bai:BAA_3335 acetyltransferase, GNAT family
YP_003242635.1	PFAM: metallophosphoesterase; KEGG: pjd:Pjdr2_0988 metallophosphoesterase
YP_003242636.1	TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; KEGG: pjd:Pjdr2_0423 translation initiation factor IF-3
YP_003242637.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003242638.1	PFAM: pentapeptide repeat protein; KEGG: bbe:BBR47_46020 hypothetical protein
YP_003242639.1	PFAM: protein of unknown function DUF606; KEGG: bbe:BBR47_19530 hypothetical protein
YP_003242640.1	PFAM: cyclic nucleotide-binding; KEGG: bbe:BBR47_19540 probable transcriptional regulator
YP_003242641.1	PFAM: protein of unknown function DUF606; KEGG: bpu:BPUM_1773 hypothetical protein
YP_003242642.1	PFAM: NUDIX hydrolase; KEGG: saq:Sare_2432 NUDIX hydrolase
YP_003242643.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_09010 hypothetical protein
YP_003242644.1	KEGG: scl:sce3628 hypothetical protein
YP_003242645.1	PFAM: regulatory protein TetR; KEGG: oih:OB0520 transcriptional regulator
YP_003242646.1	PFAM: Protein of unknown function DUF2269, transmembrane; KEGG: rpt:Rpal_0566 hypothetical protein
YP_003242647.1	PFAM: KWG Leptospira repeat protein; KEGG: ctc:CTC01367 hypothetical protein
YP_003242648.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_1279 major facilitator superfamily MFS_1
YP_003242649.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sgo:SGO_1306 transcriptional repressor MsmR
YP_003242650.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3119 sugar ABC transporter permease
YP_003242651.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3118 sugar ABC transporter permease
YP_003242652.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC3117 sugar ABC transporter substrate-binding protein
YP_003242653.1	PFAM: PfkB domain protein; Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: bsu:BSU27030 levanase
YP_003242654.1	PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; LamG domain protein jellyroll fold domain protein; KEGG: hla:Hlac_2493 glycosyl hydrolase family 32 domain protein
YP_003242655.1	PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: aau:AAur_0947 glycoside hydrolase family protein
YP_003242656.1	PFAM: aminoglycoside phosphotransferase; Choline/ethanolamine kinase; KEGG: cbk:CLL_A1400 choline/ethanolamine kinase family protein
YP_003242657.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hor:Hore_04570 transcriptional regulator, LacI family
YP_003242658.1	KEGG: ere:EUBREC_3517 hypothetical protein
YP_003242659.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ere:EUBREC_0285 sugar ABC transporter (permease)
YP_003242660.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ere:EUBREC_0284 putative ABC-type sugar transport systems, permease component
YP_003242661.1	PFAM: extracellular solute-binding protein family 1; KEGG: ere:EUBREC_0283 sugar ABC transporter (sugar-binding protein)
YP_003242662.1	PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: ere:EUBREC_0282 putative beta-fructofuranosidase protein
YP_003242663.1	PFAM: ROK family protein; KEGG: pjd:Pjdr2_1191 ROK family protein
YP_003242664.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_1444 two component transcriptional regulator, AraC family
YP_003242665.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_1445 putative sensor with HAMP domain
YP_003242666.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3590 extracellular solute-binding protein family 1
YP_003242667.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1447 binding-protein-dependent transport systems inner membrane component
YP_003242668.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3588 binding-protein-dependent transport systems inner membrane component
YP_003242669.1	KEGG: pjd:Pjdr2_5939 hypothetical protein
YP_003242670.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: gtn:GTNG_1901 hypothetical protein
YP_003242671.1	PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: pjd:Pjdr2_0762 stress responsive alpha-beta barrel domain protein
YP_003242672.1	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; aminotransferase class V; KEGG: mta:Moth_0515 histidinol phosphate aminotransferase
YP_003242673.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: pjd:Pjdr2_3053 germination protein, Ger(X)C family
YP_003242674.1	PFAM: Spore germination protein; KEGG: pjd:Pjdr2_3054 spore germination protein
YP_003242675.1	PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_3055 GerA spore germination protein
YP_003242676.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pjd:Pjdr2_0279 NAD(P)H dehydrogenase (quinone)
YP_003242677.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bcq:BCQ_0324 GabR
YP_003242678.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bha:BH0390 hypothetical protein
YP_003242679.1	KEGG: gtn:GTNG_2939 hypothetical protein
YP_003242680.1	PFAM: manganese containing catalase; KEGG: btl:BALH_2795 Mn-containing catalase
YP_003242681.1	PFAM: aminoglycoside phosphotransferase; KEGG: bbe:BBR47_11280 hypothetical protein
YP_003242682.1	KEGG: cpy:Cphy_0676 hypothetical protein
YP_003242683.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bbe:BBR47_47660 RNA polymerase ECF-type sigma factor
YP_003242684.1	KEGG: bbe:BBR47_47650 hypothetical protein
YP_003242687.1	PFAM: Glycosyl transferase, family 3-like; glycosyl transferase family 3; KEGG: pjd:Pjdr2_5919 anthranilate phosphoribosyltransferase
YP_003242688.1	PFAM: ANTAR domain protein; KEGG: pjd:Pjdr2_5918 ANTAR domain protein with unknown sensor
YP_003242689.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: pjd:Pjdr2_5917 nitrite reductase (NAD(P)H), large subunit
YP_003242690.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pjd:Pjdr2_5916 nitrite reductase (NAD(P)H), small subunit
YP_003242691.1	PFAM: formate/nitrite transporter; KEGG: pjd:Pjdr2_5915 formate/nitrite transporter
YP_003242692.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pjd:Pjdr2_5914 uroporphyrin-III C-methyltransferase
YP_003242693.1	proposed role in polysaccahride synthesis
YP_003242694.1	PFAM: aldo/keto reductase; KEGG: bha:BH3927 aryl-alcohol dehydrogenase
YP_003242695.1	KEGG: dhd:Dhaf_3108 hypothetical protein
YP_003242696.1	PFAM: glycosyl transferase family 2; KEGG: bbe:BBR47_53840 hypothetical protein
YP_003242697.1	PFAM: glycosyl transferase family 2; KEGG: bbe:BBR47_53840 hypothetical protein
YP_003242698.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bha:BH0657 pyridine nucleotide-disulphide oxidoreductase, class II
YP_003242699.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cpy:Cphy_0337 ABC transporter related
YP_003242700.1	PFAM: Integral membrane protein TerC; KEGG: bcg:BCG9842_B3984 membrane protein, TerC family
YP_003242701.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: btk:BT9727_2929 DMT family permease
YP_003242702.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: btk:BT9727_2928 LysR family transcriptional regulator
YP_003242703.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pjd:Pjdr2_0531 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003242704.1	KEGG: bbe:BBR47_43630 hypothetical protein
YP_003242705.1	KEGG: bcl:ABC1173 hypothetical protein
YP_003242706.1	SMART: regulatory protein ArsR; KEGG: bcl:ABC1174 ArsR family transcriptional regulator
YP_003242707.1	PFAM: NADPH-dependent FMN reductase; KEGG: pjd:Pjdr2_6072 NADPH-dependent FMN reductase
YP_003242708.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_0088 GCN5-related N-acetyltransferase
YP_003242709.1	PFAM: protein of unknown function DUF421; KEGG: afl:Aflv_2075 hypothetical protein
YP_003242710.1	KEGG: bcq:BCQ_3122 hypothetical protein
YP_003242711.1	TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: bbe:BBR47_16040 threonyl-tRNA synthetase
YP_003242712.1	PFAM: protein of unknown function DUF1706; KEGG: lcb:LCABL_30740 uncharacterized protein IRC4 (increased recombination centers protein 4)
YP_003242713.1	PFAM: glycosyl hydrolase family 88; KEGG: pjd:Pjdr2_5242 glycosyl hydrolase family 88
YP_003242714.1	PFAM: Heparinase II/III family protein; KEGG: cpy:Cphy_3022 heparinase II/III family protein
YP_003242715.1	PFAM: histidine kinase HAMP region domain protein; histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_5241 putative sensor with HAMP domain
YP_003242716.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_5240 two component transcriptional regulator, AraC family
YP_003242717.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5239 binding-protein-dependent transport systems inner membrane component
YP_003242718.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5238 binding-protein-dependent transport systems inner membrane component
YP_003242719.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5237 extracellular solute-binding protein family 1
YP_003242720.1	KEGG: cce:Ccel_1020 hypothetical protein
YP_003242721.1	KEGG: pjd:Pjdr2_5235 alpha-L-fucosidase
YP_003242722.1	PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: pjd:Pjdr2_5236 beta-galactosidase
YP_003242723.1	PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_3075 GerA spore germination protein
YP_003242724.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: pjd:Pjdr2_3076 germination protein, Ger(X)C family
YP_003242725.1	KEGG: pjd:Pjdr2_3077 hypothetical protein
YP_003242726.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: pjd:Pjdr2_3078 spore germination protein
YP_003242727.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcr:BCAH187_A3346 transcriptional regulator, MerR family
YP_003242728.1	KEGG: bcy:Bcer98_0168 hypothetical protein
YP_003242729.1	PFAM: Haem oxygenase-like; KEGG: dfe:Dfer_3184 heme oxygenase-like protein
YP_003242730.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_003242732.1	PFAM: Protein of unknown function DUF1963; KEGG: cpi:Cpin_3560 protein of unknown function DUF1963
YP_003242733.1	PFAM: Methyltransferase type 11; NodS family protein; Methyltransferase type 12; KEGG: pjd:Pjdr2_2947 methyltransferase type 11
YP_003242734.1	KEGG: pjd:Pjdr2_6043 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein
YP_003242735.1	KEGG: pjd:Pjdr2_0393 general stress protein
YP_003242736.1	KEGG: bld:BLi02789 YdfQ
YP_003242737.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_5575 methyl-accepting chemotaxis sensory transducer
YP_003242738.1	TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: pjd:Pjdr2_5574 amino acid adenylation domain protein
YP_003242739.1	KEGG: pjd:Pjdr2_3648 hypothetical protein
YP_003242740.1	PFAM: Glutaminase, core; KEGG: pjd:Pjdr2_4717 glutaminase
YP_003242741.1	PFAM: Protein of unknown function DUF2512; KEGG: bbe:BBR47_12130 hypothetical protein
YP_003242742.1	KEGG: dhd:Dhaf_1267 hypothetical protein
YP_003242743.1	KEGG: hypothetical protein
YP_003242744.1	KEGG: pjd:Pjdr2_4784 hypothetical protein
YP_003242745.1	PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: pjd:Pjdr2_2523 glycoside hydrolase family 2 sugar binding
YP_003242746.1	KEGG: efa:EF0274 hypothetical protein
YP_003242747.1	PFAM: Polyprenyl synthetase; KEGG: cth:Cthe_0831 farnesyl-diphosphate synthase
YP_003242748.1	KEGG: pjd:Pjdr2_2822 hypothetical protein
YP_003242750.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cce:Ccel_0186 transcriptional regulator, AraC family
YP_003242751.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pjd:Pjdr2_2713 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003242752.1	PFAM: glycoside hydrolase family 16; Ricin B lectin; SMART: Ricin B lectin; KEGG: cbe:Cbei_2828 glycoside hydrolase family protein
YP_003242753.1	PFAM: Amidohydrolase 3; KEGG: bbe:BBR47_36980 hypothetical protein
YP_003242754.1	catalyzes the formation of aspartate semialdehyde from aspartyl phosphate
YP_003242755.1	TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; KEGG: bbe:BBR47_13480 Na(+)/H(+) antiporter
YP_003242756.1	KEGG: bcl:ABC3986 hypothetical protein
YP_003242757.1	KEGG: bbe:BBR47_31460 hypothetical protein
YP_003242758.1	PFAM: tyrosine protein kinase; RIO-like kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: gtn:GTNG_1530 serine/threonine protein kinase-like protein
YP_003242759.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3228 transcriptional regulator, AraC family
YP_003242760.1	KEGG: pjd:Pjdr2_3229 phytanoyl-CoA dioxygenase
YP_003242761.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: pjd:Pjdr2_3229 phytanoyl-CoA dioxygenase
YP_003242763.1	PFAM: glycoside hydrolase family 38; KEGG: rle:RL3376 hypothetical protein
YP_003242764.1	PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: bcy:Bcer98_0966 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit
YP_003242765.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bwe:BcerKBAB4_3126 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin
YP_003242766.1	KEGG: bbe:BBR47_51250 hypothetical protein
YP_003242767.1	PFAM: aminoglycoside phosphotransferase; KEGG: pjd:Pjdr2_3090 aminoglycoside phosphotransferase
YP_003242768.1	KEGG: cai:Caci_1482 hypothetical protein
YP_003242769.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cbi:CLJ_B2596 methyltransferase
YP_003242770.1	PFAM: Amidohydrolase 3; KEGG: bbe:BBR47_15610 hypothetical protein
YP_003242771.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bbe:BBR47_08110 two-component sensor histidine kinase
YP_003242772.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bbe:BBR47_08100 two-component response regulator
YP_003242773.1	PFAM: S-layer domain protein; KEGG: bbe:BBR47_08080 hypothetical protein
YP_003242774.1	KEGG: bbe:BBR47_14430 hypothetical protein
YP_003242775.1	KEGG: bbe:BBR47_14430 hypothetical protein
YP_003242776.1	KEGG: pjd:Pjdr2_3159 transcriptional regulator, AraC family
YP_003242777.1	KEGG: pjd:Pjdr2_3570 alpha-L-fucosidase
YP_003242778.1	KEGG: gwc:GWCH70_1621 alpha,alpha-phosphotrehalase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_003242779.1	TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar-specific permease EIIA 1 domain; Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: afl:Aflv_1441 phosphotransferase system (PTS) trehalose-specific enzyme II, BC component
YP_003242780.1	KEGG: afl:Aflv_1439 transcriptional regulator, GntR family; TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_003242781.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: lsp:Bsph_1367 bacilysin biosynthesis oxidoreductase BacC
YP_003242782.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_1881 oxidoreductase domain protein
YP_003242783.1	KEGG: bcy:Bcer98_1865 hypothetical protein
YP_003242785.1	PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_1098 GerA spore germination protein
YP_003242786.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bbe:BBR47_50140 putative spore germination protein
YP_003242787.1	KEGG: bbe:BBR47_06630 hypothetical protein
YP_003242788.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bbe:BBR47_06640 spore germination protein
YP_003242789.1	PFAM: CopG domain protein DNA-binding domain protein
YP_003242790.1	KEGG: chl:Chy400_2644 bifunctional deaminase-reductase domain protein
YP_003242791.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: pjd:Pjdr2_5210 phytanoyl-CoA dioxygenase
YP_003242792.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: hypothetical protein
YP_003242793.1	KEGG: hypothetical protein
YP_003242794.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1250 protein LplB
YP_003242795.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0362 polysaccharide ABC transporter permease
YP_003242796.1	PFAM: extracellular solute-binding protein family 1; KEGG: oih:OB3210 hypothetical protein
YP_003242797.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: hor:Hore_15050 regulatory protein GntR HTH
YP_003242798.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bbe:BBR47_27760 hypothetical protein
YP_003242799.1	KEGG: bbe:BBR47_27770 hypothetical protein
YP_003242800.1	KEGG: pjd:Pjdr2_0732 hypothetical protein
YP_003242801.1	KEGG: bat:BAS2594 CpsH domain-containing protein
YP_003242802.1	KEGG: bcl:ABC1198 hypothetical protein
YP_003242803.1	KEGG: amr:AM1_2982 hypothetical protein
YP_003242804.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_2002 putative sensor with HAMP domain
YP_003242805.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_2003 two component transcriptional regulator, AraC family
YP_003242806.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_2004 extracellular solute-binding protein family 1
YP_003242807.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2005 binding-protein-dependent transport systems inner membrane component
YP_003242808.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2006 binding-protein-dependent transport systems inner membrane component
YP_003242809.1	PFAM: glycosidase PH1107-related; KEGG: dps:DP2454 hypothetical protein
YP_003242810.1	KEGG: hypothetical protein
YP_003242811.1	PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 28; KEGG: hypothetical protein
YP_003242812.1	KEGG: pen:PSEEN4578 hypothetical protein
YP_003242813.1	KEGG: cbe:Cbei_3189 hypothetical protein
YP_003242814.1	KEGG: btk:BT9727_1773 hypothetical protein
YP_003242815.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bsu:BSU08250 hypothetical protein
YP_003242816.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: pjd:Pjdr2_2976 phytanoyl-CoA dioxygenase
YP_003242817.1	PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; KEGG: cce:Ccel_1250 signal transduction histidine kinase, LytS
YP_003242818.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: cce:Ccel_1251 two component transcriptional regulator, AraC family
YP_003242819.1	PFAM: extracellular solute-binding protein family 1; KEGG: cce:Ccel_1252 extracellular solute-binding protein family 1
YP_003242820.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_1253 binding-protein-dependent transport systems inner membrane component
YP_003242821.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_1254 binding-protein-dependent transport systems inner membrane component
YP_003242822.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cpy:Cphy_0398 oxidoreductase domain-containing protein
YP_003242823.1	KEGG: cbe:Cbei_2751 hypothetical protein
YP_003242824.1	PFAM: chalcone and stilbene synthase domain protein; Methyltransferase type 12; KEGG: pin:Ping_0256 naringenin-chalcone synthase
YP_003242825.1	PFAM: monooxygenase FAD-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: sru:SRU_1596 FAD dependent oxidoreductase, putative
YP_003242827.1	KEGG: amt:Amet_1896 hypothetical protein
YP_003242828.1	PFAM: polysaccharide deacetylase; KEGG: ate:Athe_2723 polysaccharide deacetylase
YP_003242829.1	PFAM: OsmC family protein; KEGG: bbe:BBR47_57440 hypothetical protein
YP_003242830.1	TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bcy:Bcer98_3340 large-conductance mechanosensitive channel
YP_003242832.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_27680 probable ABC transporter ATP binding protein
YP_003242833.1	PFAM: regulatory protein TetR; KEGG: gwc:GWCH70_2502 transcriptional regulator, TetR family
YP_003242834.1	PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bcl:ABC3499 carboxylic ester hydrolase
YP_003242835.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bcl:ABC1392 major facilitator (MFS) superfamily protein
YP_003242836.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbe:BBR47_49640 hypothetical protein
YP_003242837.1	PFAM: FAD dependent oxidoreductase; KEGG: pjd:Pjdr2_2975 FAD dependent oxidoreductase
YP_003242838.1	KEGG: bwe:BcerKBAB4_2210 hypothetical protein
YP_003242839.1	PFAM: regulatory protein TetR; KEGG: bha:BH0987 TetR/AcrR family transcriptional regulator
YP_003242840.1	PFAM: GCN5-related N-acetyltransferase; KEGG: oih:OB3186 hypothetical protein
YP_003242841.1	PFAM: cytochrome P450; FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bsu:BSU07250 hypothetical protein
YP_003242842.1	PFAM: helix-turn-helix HxlR type; KEGG: bbe:BBR47_31240 hypothetical protein
YP_003242843.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bbe:BBR47_31250 hypothetical protein
YP_003242844.1	PFAM: zinc/iron permease; KEGG: rxy:Rxyl_0655 zinc/iron permease
YP_003242845.1	KEGG: aba:Acid345_3530 hypothetical protein
YP_003242846.1	PFAM: aminoglycoside phosphotransferase; KEGG: bay:RBAM_015790 hypothetical protein
YP_003242847.1	PFAM: beta-lactamase; S-layer domain protein; KEGG: bbe:BBR47_14650 hypothetical protein
YP_003242848.1	PFAM: alpha/beta hydrolase fold; KEGG: bha:BH0763 hypothetical protein
YP_003242849.1	PFAM: regulatory protein MerR; transcription activator effector binding; SMART: regulatory protein MerR; KEGG: bbe:BBR47_31200 probable transcriptional regulator
YP_003242850.1	PFAM: beta-lactamase; KEGG: mba:Mbar_A1202 beta-lactamase class C and other pencillin-binding proteins
YP_003242851.1	PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: lsp:Bsph_3227 hypothetical protein
YP_003242852.1	PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: psp:PSPPH_2926 hypothetical protein
YP_003242853.1	KEGG: pjd:Pjdr2_4174 hypothetical protein
YP_003242854.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4175 transcriptional regulator, AraC family
YP_003242855.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_0927 transcriptional regulator, AraC family
YP_003242856.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0926 binding-protein-dependent transport systems inner membrane component
YP_003242857.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0925 binding-protein-dependent transport systems inner membrane component
YP_003242858.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_0924 extracellular solute-binding protein family 1
YP_003242859.1	PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; Parallel beta-helix repeat; KEGG: pjd:Pjdr2_4180 Ig domain protein group 2 domain protein
YP_003242860.1	KEGG: pjd:Pjdr2_4177 hypothetical protein
YP_003242861.1	PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: pjd:Pjdr2_4178 glycoside hydrolase family 2 TIM barrel
YP_003242862.1	PFAM: glycosyl hydrolase family 88; KEGG: pjd:Pjdr2_2582 glycosyl hydrolase family 88
YP_003242863.1	PFAM: cytochrome P450; KEGG: bcb:BCB4264_A2656 cytochrome P450 family protein
YP_003242864.1	PFAM: transcriptional regulator PadR family protein; KEGG: bcb:BCB4264_A2655 hypothetical protein
YP_003242865.1	PFAM: pentapeptide repeat protein; KEGG: rer:RER_12430 hypothetical protein
YP_003242866.1	KEGG: bbe:BBR47_58960 hypothetical protein
YP_003242867.1	KEGG: pjd:Pjdr2_4127 ABC-type sugar transport system periplasmic component-like protein
YP_003242868.1	KEGG: pjd:Pjdr2_4127 ABC-type sugar transport system periplasmic component-like protein
YP_003242869.1	KEGG: bth:BT_3676 hypothetical protein
YP_003242871.1	PFAM: Coat F domain protein; KEGG: bcl:ABC1183 spore coat protein
YP_003242872.1	PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_0657 transcriptional regulator, AraC family
YP_003242873.1	PFAM: periplasmic binding protein; KEGG: gwc:GWCH70_1969 periplasmic binding protein
YP_003242874.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_003242875.1	PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bld:BLi03907 YbbB
YP_003242876.1	PFAM: periplasmic binding protein; KEGG: lsp:Bsph_1671 achromobactin-binding periplasmic protein precursor
YP_003242877.1	PFAM: transport system permease protein; KEGG: bha:BH3790 iron (III) dicitrate transport system (permease)
YP_003242878.1	PFAM: transport system permease protein; KEGG: bha:BH3789 iron (III) dicitrate transport system (permease)
YP_003242879.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU32940 hypothetical protein
YP_003242880.1	KEGG: bbe:BBR47_26390 hypothetical protein
YP_003242881.1	PFAM: glycosidase PH1107-related; KEGG: pjd:Pjdr2_5077 glycosidase PH1107-related
YP_003242882.1	PFAM: extracellular solute-binding protein family 1; KEGG: oih:OB0774 sugar ABC transporter sugar-binding protein
YP_003242883.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hor:Hore_13130 binding-protein-dependent transport systems inner membrane component
YP_003242884.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0776 sugar ABC transporter permease
YP_003242885.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: oih:OB0777 hypothetical protein
YP_003242886.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: oih:OB0778 hypothetical protein
YP_003242887.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: lmh:LMHCC_2741 periplasmic beta-glucosidase (gentiobiase)(cellobiase) (beta-D-glucoside glucohydrolase)
YP_003242888.1	PFAM: regulatory protein TetR; KEGG: btl:BALH_2972 TetR family transcriptional regulator
YP_003242889.1	KEGG: bay:RBAM_004700 YvaD
YP_003242890.1	KEGG: pjd:Pjdr2_6130 hypothetical protein
YP_003242891.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sco:SCO0131 secreted protein
YP_003242892.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: pjd:Pjdr2_3143 germination protein, Ger(X)C family
YP_003242894.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: pjd:Pjdr2_3142 spore germination protein
YP_003242895.1	PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_3141 GerA spore germination protein
YP_003242896.1	PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_3185 transcriptional regulator, GntR family
YP_003242897.1	KEGG: pjd:Pjdr2_3186 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_003242898.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1800 transcriptional regulator, AraC family
YP_003242899.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4102 binding-protein-dependent transport systems inner membrane component
YP_003242900.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU30170 hypothetical protein
YP_003242901.1	PFAM: extracellular solute-binding protein family 1; KEGG: bld:BLi01384 hypothetical protein
YP_003242902.1	PFAM: beta-lactamase; KEGG: dfe:Dfer_2861 beta-lactamase
YP_003242903.1	PFAM: Pectinesterase; KEGG: ote:Oter_4273 pectinesterase
YP_003242904.1	PFAM: glycosyl hydrolase family 88; KEGG: cpi:Cpin_5505 glycosyl hydrolase family 88
YP_003242905.1	PFAM: glycoside hydrolase family 43; KEGG: dze:Dd1591_3351 glycoside hydrolase family 43
YP_003242906.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: bld:BLi00865 YfiF
YP_003242907.1	KEGG: cce:Ccel_1020 hypothetical protein
YP_003242908.1	PFAM: glycoside hydrolase family 28; SMART: Parallel beta-helix repeat; KEGG: fjo:Fjoh_4115 glycoside hydrolase family protein
YP_003242909.1	KEGG: bcv:Bcav_3362 hypothetical protein
YP_003242910.1	TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: mcl:MCCL_1621 hypothetical protein
YP_003242911.1	PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: bha:BH1006 methyl-accepting chemotaxis protein
YP_003242912.1	PFAM: protein of unknown function DUF421; KEGG: bcz:BCZK3910 hypothetical protein
YP_003242913.1	KEGG: bha:BH2071 hypothetical protein
YP_003242914.1	KEGG: bbe:BBR47_28210 hypothetical protein
YP_003242915.1	PFAM: Uncharacterised conserved protein UCP029692; KEGG: bha:BH2073 hypothetical protein
YP_003242916.1	TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5; KEGG: bbe:BBR47_28230 ABC transporter substrate binding protein
YP_003242917.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_28240 ABC transporter permease protein
YP_003242918.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2076 oligopeptide ABC transporter (permease)
YP_003242919.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH2077 oligopeptide ABC transporter ATP-binding protein
YP_003242920.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH2078 oligopeptide ABC transporter ATP-binding protein
YP_003242921.1	PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH2079 hypothetical protein
YP_003242922.1	PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: bbe:BBR47_39720 hypothetical protein
YP_003242923.1	PFAM: regulatory protein TetR; KEGG: lmc:Lm4b_01730 transcription regulator
YP_003242924.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bbe:BBR47_14660 two-component response regulator
YP_003242925.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: cno:NT01CX_0977 two-component sensor histidine kinase
YP_003242926.1	KEGG: gau:GAU_2748 hypothetical protein
YP_003242927.1	PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bcu:BCAH820_5199 sensor histidine kinase
YP_003242928.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcu:BCAH820_5200 DNA-binding response regulator
YP_003242929.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lin:lin2219 hypothetical protein
YP_003242930.1	PFAM: protein of unknown function DUF214; Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bbe:BBR47_14380 probable ABC transporter permease protein
YP_003242931.1	PFAM: class II aldolase/adducin family protein; KEGG: ate:Athe_0695 class II aldolase/adducin family protein
YP_003242932.1	KEGG: pjd:Pjdr2_5572 S-layer domain protein
YP_003242933.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: cpy:Cphy_0568 LacI family transcription regulator
YP_003242934.1	KEGG: dze:Dd1591_3550 hypothetical protein
YP_003242935.1	KEGG: rsa:RSal33209_3309 hypothetical protein
YP_003242936.1	KEGG: dze:Dd1591_3550 hypothetical protein
YP_003242937.1	PFAM: oxidoreductase domain protein; KEGG: cpy:Cphy_0398 oxidoreductase domain-containing protein
YP_003242938.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5580 binding-protein-dependent transport systems inner membrane component
YP_003242939.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4732 binding-protein-dependent transport systems inner membrane component
YP_003242940.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5271 extracellular solute-binding protein family 1
YP_003242941.1	KEGG: dhd:Dhaf_1087 hypothetical protein
YP_003242942.1	KEGG: aoe:Clos_1276 hypothetical protein
YP_003242943.1	PFAM: protein of unknown function UPF0118; KEGG: bsu:BSU31160 hypothetical protein
YP_003242944.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: lwe:lwe0603 Rrf2 family protein
YP_003242945.1	PFAM: Domain of unknown function DUF1835; KEGG: pjd:Pjdr2_3958 domain of unknown function DUF1835
YP_003242947.1	PFAM: protein of unknown function DUF896; KEGG: bpu:BPUM_1689 hypothetical protein
YP_003242948.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pjd:Pjdr2_4511 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003242949.1	KEGG: pjd:Pjdr2_4510 hypothetical protein
YP_003242950.1	PFAM: Protein of unknown function DUF2306, membrane; KEGG: bcl:ABC0531 hypothetical protein
YP_003242951.1	PFAM: ThiJ/PfpI domain protein; KEGG: bcl:ABC0530 hypothetical protein
YP_003242953.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcl:ABC0529 two-component response regulator
YP_003242954.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bcl:ABC0528 two-component sensor histidine kinase
YP_003242955.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: pjd:Pjdr2_0913 spore germination protein
YP_003242956.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: pjd:Pjdr2_0916 germination protein, Ger(X)C family
YP_003242957.1	PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_0914 GerA spore germination protein
YP_003242958.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_50430 putative acetyltransferase
YP_003242959.1	PFAM: lipolytic protein G-D-S-L family; KEGG: pjd:Pjdr2_3550 lipolytic protein G-D-S-L family
YP_003242960.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bbe:BBR47_27230 probable transcriptional regulator
YP_003242961.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bld:BLi02819 hypothetical protein
YP_003242962.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bld:BLi00283 TatCD
YP_003242963.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bld:BLi00282 TatAD
YP_003242964.1	KEGG: bbe:BBR47_55450 hypothetical protein
YP_003242965.1	KEGG: bbe:BBR47_55440 putative dehydrogenase
YP_003242966.1	PFAM: glucose-methanol-choline oxidoreductase; KEGG: bbe:BBR47_55430 putative dehydrogenase
YP_003242967.1	PFAM: cytochrome c class I; KEGG: bld:BLi03770 CccB
YP_003242968.1	KEGG: pjd:Pjdr2_1000 hypothetical protein
YP_003242969.1	PFAM: amino acid permease-associated region; KEGG: bpu:BPUM_3599 amino acid APC transporter
YP_003242971.1	KEGG: cth:Cthe_3165 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_003242972.1	PFAM: Ig domain protein group 2 domain protein; coagulation factor 5/8 type domain protein; SMART: Ig domain protein group 2 domain protein; Parallel beta-helix repeat; KEGG: pjd:Pjdr2_1769 coagulation factor 5/8 type domain protein
YP_003242973.1	KEGG: bwe:BcerKBAB4_3136 hypothetical protein
YP_003242974.1	KEGG: bbe:BBR47_56040 hypothetical protein
YP_003242975.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_003242976.1	KEGG: pjd:Pjdr2_3828 hypothetical protein
YP_003242977.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2797 phosphonate ABC transporter, inner membrane subunit
YP_003242978.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2798 phosphonate ABC transporter, inner membrane subunit
YP_003242979.1	KEGG: pjd:Pjdr2_2799 phosphonate ABC transporter, ATPase subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003242980.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: pjd:Pjdr2_2800 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_003242981.1	PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: btl:BALH_3325 2',3'-cyclic-nucleotide 2'-phosphodiesterase
YP_003242982.1	PFAM: DinB family protein; KEGG: gtn:GTNG_2798 hypothetical protein
YP_003242983.1	PFAM: SirA family protein; KEGG: svi:Svir_19740 predicted redox protein, regulator of disulfide bond formation
YP_003242985.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pjd:Pjdr2_3061 integrase family protein
YP_003242986.1	KEGG: fnu:FN1780 hypothetical protein
YP_003242987.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_09430 hypothetical protein
YP_003242988.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pjd:Pjdr2_2526 hypothetical protein
YP_003242989.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_0651 GCN5-related N-acetyltransferase
YP_003242990.1	KEGG: bay:RBAM_003380 TmrB
YP_003242991.1	PFAM: periplasmic solute binding protein; KEGG: oih:OB0431 ABC transporter permease
YP_003242992.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcl:ABC3960 Mn2+/Zn2+ ABC transporter ATP-binding protein
YP_003242993.1	PFAM: ABC-3 protein; KEGG: oih:OB0433 ABC transporter permease
YP_003242994.1	PFAM: ABC-3 protein; KEGG: oih:OB0434 ABC transporter permease
YP_003242995.1	PFAM: GCN5-related N-acetyltransferase; KEGG: npu:Npun_F4186 GCN5-related N-acetyltransferase
YP_003242996.1	PFAM: NUDIX hydrolase; KEGG: bha:BH0812 hypothetical protein
YP_003242997.1	PFAM: glycosyl transferase group 1; KEGG: oih:OB2096 hypothetical protein
YP_003242998.1	KEGG: mab:MAB_1776 bacteriophage protein
YP_003242999.1	PFAM: glycosyl transferase family 2; KEGG: drm:Dred_1408 glycosyl transferase family protein
YP_003243000.1	PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein
YP_003243003.1	PFAM: glycosyl transferase family 2; KEGG: cac:CAC0795 cell wall biosynthesis glycosyltransferase
YP_003243004.1	PFAM: Domain of unknown function DUF1835; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pjd:Pjdr2_0714 metal dependent phosphohydrolase
YP_003243005.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: lsp:Bsph_4771 pigment production hydroxylase
YP_003243006.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_003243007.1	KEGG: xau:Xaut_4155 urease, gamma subunit; TIGRFAM: urease, gamma subunit; urease, beta subunit; PFAM: Urease gamma subunit region; Urease beta subunit
YP_003243008.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: pjd:Pjdr2_2819 germination protein, Ger(X)C family
YP_003243009.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: pjd:Pjdr2_2818 spore germination protein
YP_003243010.1	PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_2817 GerA spore germination protein
YP_003243011.1	KEGG: bwe:BcerKBAB4_2554 hypothetical protein
YP_003243012.1	KEGG: gwc:GWCH70_1395 histidine kinase; TIGRFAM: diguanylate cyclase; PFAM: ATP-binding region ATPase domain protein; GGDEF domain containing protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GGDEF domain containing protein
YP_003243013.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bcz:BCZK0173 Bcr/CflA subfamily drug resistance transporter
YP_003243014.1	PFAM: VanW family protein; KEGG: bsu:BSU18720 hypothetical protein
YP_003243015.1	PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: bcx:BCA_3178 hypothetical protein
YP_003243016.1	PFAM: Protein of unknown function DUF2243, membrane; KEGG: lsp:Bsph_3144 hypothetical protein
YP_003243017.1	PFAM: cytochrome P450; KEGG: bcg:BCG9842_B2673 cytochrome P450
YP_003243018.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3159 transcriptional regulator, AraC family
YP_003243019.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3271 binding-protein-dependent transport systems inner membrane component
YP_003243020.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3272 binding-protein-dependent transport systems inner membrane component
YP_003243021.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3273 extracellular solute-binding protein family 1
YP_003243022.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_1491 xylose isomerase domain protein TIM barrel
YP_003243023.1	KEGG: mgi:Mflv_2089 hypothetical protein
YP_003243024.1	PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Diverse 7TM receptor transmembrane region; histidine kinase dimerisation and phosphoacceptor region; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: lbf:LBF_0920 sensor histidine kinase and response regulator of a two component complex
YP_003243025.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: amt:Amet_1559 two component LuxR family transcriptional regulator
YP_003243026.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: esi:Exig_0175 BadM/Rrf2 family transcriptional regulator
YP_003243027.1	TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: eat:EAT1b_1820 luciferase-like monooxygenase
YP_003243028.1	KEGG: cno:NT01CX_0125 hypothetical protein
YP_003243029.1	KEGG: bbe:BBR47_10520 hypothetical protein
YP_003243031.1	TIGRFAM: germination protein, Ger(x)C family; KEGG: bcu:BCAH820_B0226 spore germination protein XC
YP_003243032.1	PFAM: GerA spore germination protein; KEGG: afl:Aflv_0190 spore germination protein GerKA
YP_003243033.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bai:BAA_A0159 spore germination protein GerXB
YP_003243034.1	KEGG: pjd:Pjdr2_1781 hypothetical protein
YP_003243035.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: hypothetical protein
YP_003243036.1	KEGG: pjd:Pjdr2_4648 hypothetical protein
YP_003243037.1	PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: pjd:Pjdr2_4649 glycoside hydrolase family 38
YP_003243038.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5352 binding-protein-dependent transport systems inner membrane component
YP_003243039.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5351 binding-protein-dependent transport systems inner membrane component
YP_003243040.1	PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein
YP_003243041.1	PFAM: Domain of unknown function DUF1793; KEGG: pjd:Pjdr2_4654 domain of unknown function DUF1793
YP_003243042.1	KEGG: dtu:Dtur_0165 hypothetical protein
YP_003243043.1	KEGG: pjd:Pjdr2_0847 S-layer domain protein
YP_003243044.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bcq:BCQ_1672 Zn-dependent hydrolase
YP_003243045.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1516 binding-protein-dependent transport systems inner membrane component
YP_003243046.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1515 binding-protein-dependent transport systems inner membrane component
YP_003243047.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC3271 sugar ABC transporter substrate-binding protein
YP_003243048.1	PFAM: protein of unknown function DUF896; KEGG: pjd:Pjdr2_5281 protein of unknown function DUF896
YP_003243049.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ctc:CTC00424 transcriptional regulator
YP_003243050.1	PFAM: oxidoreductase domain protein; KEGG: pjd:Pjdr2_4587 oxidoreductase domain protein
YP_003243051.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: sab:SAB1837 hypothetical protein
YP_003243052.1	TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: rxy:Rxyl_3089 luciferase-like protein
YP_003243053.1	PFAM: helix-turn-helix HxlR type; transcriptional regulator PadR family protein; KEGG: sab:SAB1836c transcriptional regulator
YP_003243054.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: pla:Plav_3200 deaminase-reductase domain-containing protein
YP_003243055.1	KEGG: bcu:BCAH820_4732 putative lipoprotein
YP_003243056.1	KEGG: bcv:Bcav_0587 hypothetical protein
YP_003243057.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bsu:BSU38900 hypothetical protein
YP_003243058.1	PFAM: response regulator receiver; regulatory protein LuxR; sigma-70 region 4 domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bbe:BBR47_32160 two-component response regulator
YP_003243059.1	PFAM: Amidase; KEGG: pjd:Pjdr2_3091 amidase
YP_003243060.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_0723 EmrB/QacA family drug resistance transporter
YP_003243062.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: afl:Aflv_1036 thiol-disulfide oxidoreductase
YP_003243064.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_4941 GCN5-related N-acetyltransferase
YP_003243065.1	KEGG: bcu:BCAH820_B0286 hypothetical protein
YP_003243066.1	PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein
YP_003243067.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: bld:BLi03701 hypothetical protein
YP_003243068.1	PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: phe:Phep_2759 alpha-L-rhamnosidase
YP_003243069.1	KEGG: fjo:Fjoh_4103 hypothetical protein
YP_003243070.1	KEGG: bcv:Bcav_3617 hypothetical protein
YP_003243071.1	PFAM: type III effector Hrp-dependent outers; KEGG: mno:Mnod_2419 type III effector Hrp-dependent outers
YP_003243072.1	PFAM: ribulose bisphosphate carboxylase large chain; KEGG: phe:Phep_2747 ribulose-bisphosphate carboxylase
YP_003243073.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: bph:Bphy_6847 Asp/Glu/hydantoin racemase
YP_003243074.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: phe:Phep_2775 oxidoreductase domain protein
YP_003243076.1	TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: tna:CTN_1064 glycerol kinase 2
YP_003243077.1	PFAM: Transketolase domain protein; Transketolase central region; KEGG: lmo:lmo1033 hypothetical protein
YP_003243078.1	PFAM: Transketolase domain protein; KEGG: tna:CTN_1622 transketolase, N-terminal subunit
YP_003243079.1	KEGG: lmc:Lm4b_01051 hypothetical protein
YP_003243080.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: lmf:LMOf2365_1051 LacI family transcription regulator
YP_003243081.1	KEGG: dth:DICTH_1894 hypothetical protein
YP_003243083.1	KEGG: phe:Phep_2820 hypothetical protein
YP_003243084.1	KEGG: pjd:Pjdr2_1998 dienelactone hydrolase-like protein
YP_003243085.1	KEGG: dfe:Dfer_2863 hypothetical protein
YP_003243086.1	PFAM: Pectinesterase; KEGG: bpu:BPUM_1808 pectinesterase
YP_003243087.1	KEGG: bpu:BPUM_2978 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase
YP_003243088.1	KEGG: bth:BT_2899 hypothetical protein
YP_003243089.1	KEGG: sus:Acid_6525 hypothetical protein
YP_003243090.1	KEGG: sus:Acid_6525 hypothetical protein
YP_003243091.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cag:Cagg_0083 binding-protein-dependent transport systems inner membrane component
YP_003243092.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_1597 binding-protein-dependent transport systems inner membrane component
YP_003243093.1	KEGG: ate:Athe_0178 hypothetical protein
YP_003243094.1	PFAM: NHL repeat containing protein; KEGG: csc:Csac_2416 hypothetical protein
YP_003243095.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cag:Cagg_0087 binding-protein-dependent transport systems inner membrane component
YP_003243096.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cag:Cagg_0088 binding-protein-dependent transport systems inner membrane component
YP_003243097.1	PFAM: extracellular solute-binding protein family 1; KEGG: dtu:Dtur_1594 extracellular solute-binding protein family 1
YP_003243098.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: cpr:CPR_2340 ABC transporter
YP_003243099.1	KEGG: sus:Acid_6525 hypothetical protein
YP_003243100.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_2985 transcriptional regulator, AraC family
YP_003243101.1	KEGG: dze:Dd1591_0644 hypothetical protein
YP_003243102.1	KEGG: cak:Caul_3611 hypothetical protein
YP_003243103.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_6108 extracellular solute-binding protein family 1
YP_003243104.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_6108 extracellular solute-binding protein family 1
YP_003243105.1	KEGG: ate:Athe_2029 ABC-type sugar transport system periplasmic component-like protein
YP_003243107.1	KEGG: pjd:Pjdr2_3159 transcriptional regulator, AraC family
YP_003243108.1	KEGG: ent:Ent638_0482 pectate lyase
YP_003243109.1	KEGG: phe:Phep_2820 hypothetical protein
YP_003243110.1	PFAM: glycoside hydrolase family 28; SMART: Parallel beta-helix repeat; KEGG: fjo:Fjoh_4115 glycoside hydrolase family protein
YP_003243111.1	KEGG: cpi:Cpin_1806 hypothetical protein
YP_003243112.1	PFAM: glycosyl hydrolase family 88; KEGG: dfe:Dfer_2841 glycosyl hydrolase family 88
YP_003243113.1	PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: bth:BT_2523 alpha-rhamnosidase
YP_003243114.1	KEGG: dfe:Dfer_1563 hypothetical protein
YP_003243115.1	PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: amr:AM1_2814 glycoside hydrolase family protein
YP_003243116.1	KEGG: dfe:Dfer_1752 hypothetical protein
YP_003243117.1	PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: pjd:Pjdr2_1747 beta-galactosidase
YP_003243118.1	PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: pjd:Pjdr2_1682 beta-galactosidase
YP_003243119.1	PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: rca:Rcas_3615 alpha-L-fucosidase
YP_003243120.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3543 transcriptional regulator, AraC family
YP_003243121.1	PFAM: extracellular solute-binding protein family 1; KEGG: hor:Hore_00380 extracellular solute-binding protein family 1
YP_003243122.1	PFAM: Pectate lyase/Amb allergen; copper amine oxidase domain protein; SMART: Pectate lyase/Amb allergen; KEGG: hau:Haur_3461 cellulose-binding family II protein
YP_003243123.1	KEGG: dae:Dtox_2031 hypothetical protein
YP_003243125.1	PFAM: protein of unknown function DUF74; KEGG: pjd:Pjdr2_3359 protein of unknown function DUF74
YP_003243126.1	KEGG: bbe:BBR47_56070 hypothetical protein
YP_003243127.1	PFAM: copper amine oxidase domain protein; KEGG: dae:Dtox_4298 copper amine oxidase domain protein
YP_003243128.1	KEGG: bpu:BPUM_0898 transposase
YP_003243129.1	KEGG: bwe:BcerKBAB4_2746 hypothetical protein
YP_003243130.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1933 two component transcriptional regulator, AraC family
YP_003243131.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bay:RBAM_005350 hypothetical protein
YP_003243132.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: aci:ACIAD2725 putative oxidoreductase, NADH-dependent flavin oxidoreductase
YP_003243133.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cms:CMS_0968 putative oxidoreductase
YP_003243134.1	PFAM: regulatory protein TetR; KEGG: cbe:Cbei_3644 TetR family transcriptional regulator
YP_003243136.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cbf:CLI_3795 AraC family transcriptional regulator
YP_003243137.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bpy:Bphyt_1103 GCN5-related N-acetyltransferase
YP_003243142.1	KEGG: oih:OB0926 hypothetical protein
YP_003243144.1	PFAM: Integrase catalytic region; KEGG: bpu:BPUM_0899 integrase
YP_003243145.1	PFAM: protein of unknown function DUF227; KEGG: pjd:Pjdr2_2702 aminoglycoside phosphotransferase
YP_003243147.1	PFAM: NUDIX hydrolase; KEGG: bcl:ABC3269 hypothetical protein
YP_003243149.1	KEGG: bbe:BBR47_11610 hypothetical protein
YP_003243150.1	KEGG: pjd:Pjdr2_4944 alpha-L-fucosidase-like protein
YP_003243151.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbe:BBR47_15680 transcriptional regulator
YP_003243152.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_15690 hypothetical protein
YP_003243153.1	PFAM: protein of unknown function UPF0157; KEGG: cbk:CLL_A2139 protein YqkA
YP_003243154.1	PFAM: aminoglycoside phosphotransferase; KEGG: bcz:BCZK1887 hypothetical protein
YP_003243155.1	KEGG: bcu:BCAH820_1794 hypothetical protein
YP_003243156.1	KEGG: pjd:Pjdr2_0149 FMN reductase; TIGRFAM: FMN reductase; PFAM: NADPH-dependent FMN reductase
YP_003243157.1	KEGG: pjd:Pjdr2_5225 nitrilotriacetate monooxygenase protein component A
YP_003243158.1	KEGG: pjd:Pjdr2_5226 hypothetical protein
YP_003243159.1	KEGG: pjd:Pjdr2_5227 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_003243160.1	TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: pjd:Pjdr2_5228 luciferase-like monooxygenase
YP_003243161.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5229 ABC transporter related
YP_003243162.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5230 polar amino acid ABC transporter, inner membrane subunit
YP_003243163.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5231 polar amino acid ABC transporter, inner membrane subunit
YP_003243164.1	PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pjd:Pjdr2_5232 extracellular solute-binding protein family 3
YP_003243165.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_5234 transcriptional regulator, LysR family
YP_003243166.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bpu:BPUM_0230 acetyltransferase
YP_003243167.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_5233 GCN5-related N-acetyltransferase
YP_003243168.1	KEGG: csc:Csac_1031 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003243169.1	KEGG: bcl:ABC1238 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003243170.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_2221 peptide ABC transporter, permease protein
YP_003243171.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_2220 permease protein of oligopeptide ABC transporter
YP_003243172.1	PFAM: extracellular solute-binding protein family 5; KEGG: cpy:Cphy_0431 extracellular solute-binding protein
YP_003243173.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: det:DET0533 HAD family hydrolase
YP_003243174.1	PFAM: X-Pro dipeptidyl-peptidase domain protein; peptidase S15; KEGG: rxy:Rxyl_2383 peptidase S15
YP_003243175.1	KEGG: pjd:Pjdr2_1622 hypothetical protein
YP_003243176.1	KEGG: cth:Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase
YP_003243177.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2070 binding-protein-dependent transport systems inner membrane component
YP_003243178.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2069 binding-protein-dependent transport systems inner membrane component
YP_003243179.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_2068 extracellular solute-binding protein family 1
YP_003243180.1	PFAM: helix-turn-helix HxlR type; KEGG: cbi:CLJ_B1630 putative transcriptional regulator
YP_003243181.1	KEGG: hypothetical protein
YP_003243182.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fre:Franean1_4846 short-chain dehydrogenase/reductase SDR
YP_003243183.1	PFAM: regulatory protein TetR; KEGG: bcl:ABC0634 TetR family transcriptional regulator
YP_003243184.1	KEGG: pjd:Pjdr2_3334 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_003243185.1	KEGG: dhd:Dhaf_4247 hypothetical protein
YP_003243186.1	KEGG: bpu:BPUM_0898 transposase
YP_003243187.1	KEGG: pjd:Pjdr2_5595 transcriptional regulator, TetR family
YP_003243188.1	KEGG: cbe:Cbei_3592 ketopantoate reductase ApbA/PanE
YP_003243189.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbe:BBR47_14480 putative oxidoreductase
YP_003243190.1	KEGG: bbe:BBR47_14470 probable transcriptional regulator
YP_003243192.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sgr:SGR_613 putative oxidoreductase
YP_003243193.1	KEGG: hha:Hhal_0923 3-beta hydroxysteroid dehydrogenase/isomerase
YP_003243194.1	PFAM: regulatory protein TetR; KEGG: npu:Npun_R5583 TetR family transcriptional regulator
YP_003243195.1	KEGG: sgo:SGO_0279 putative lipoprotein
YP_003243196.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: hypothetical protein
YP_003243197.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mcl:MCCL_0021 DNA-binding response regulator
YP_003243198.1	PFAM: Transglycosylase-associated protein; KEGG: gwc:GWCH70_1716 transglycosylase-associated protein
YP_003243199.1	PFAM: peptidase S41; SMART: peptidase S41; KEGG: sus:Acid_1599 peptidase S41
YP_003243200.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: rhi:NGR_c22230 putative reductase protein
YP_003243201.1	PFAM: regulatory protein TetR; KEGG: tde:TDE0393 TetR family transcriptional regulator
YP_003243202.1	PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bld:BLi02091 hypothetical protein
YP_003243203.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_1761 signal transduction histidine kinase, LytS
YP_003243204.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_1760 two component transcriptional regulator, AraC family
YP_003243205.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1759 extracellular solute-binding protein family 1
YP_003243206.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1758 binding-protein-dependent transport systems inner membrane component
YP_003243207.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1757 binding-protein-dependent transport systems inner membrane component
YP_003243208.1	PFAM: oxidoreductase domain protein; KEGG: ate:Athe_2082 oxidoreductase domain protein
YP_003243209.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: oih:OB3400 hypothetical protein
YP_003243210.1	PFAM: protein of unknown function DUF993; KEGG: rca:Rcas_2458 hypothetical protein
YP_003243211.1	PFAM: oxidoreductase domain protein; KEGG: bcl:ABC0379 oxidoreductase
YP_003243212.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: oih:OB3397 hypothetical protein
YP_003243213.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cno:NT01CX_0977 two-component sensor histidine kinase
YP_003243214.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cno:NT01CX_0976 transcriptional regulatory protein
YP_003243215.1	PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bcl:ABC3499 carboxylic ester hydrolase
YP_003243216.1	PFAM: protein of unknown function DUF1349; KEGG: cai:Caci_2143 protein of unknown function DUF1349
YP_003243218.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: pjd:Pjdr2_0317 glycoside hydrolase family 3 domain protein
YP_003243219.1	PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: mca:MCA0941 glycosyl hydrolase, putative
YP_003243220.1	KEGG: ote:Oter_4068 hypothetical protein
YP_003243221.1	PFAM: Protein of unknown function DUF2329; KEGG: cag:Cagg_0082 hypothetical protein
YP_003243222.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cag:Cagg_0083 binding-protein-dependent transport systems inner membrane component
YP_003243223.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chl:Chy400_4172 binding-protein-dependent transport systems inner membrane component
YP_003243224.1	KEGG: cag:Cagg_0085 hypothetical protein
YP_003243225.1	PFAM: NHL repeat containing protein; KEGG: chl:Chy400_4170 NHL repeat containing protein
YP_003243226.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cag:Cagg_0087 binding-protein-dependent transport systems inner membrane component
YP_003243227.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: taf:THA_1932 sugar ABC transporter permease, putative
YP_003243228.1	PFAM: extracellular solute-binding protein family 1; KEGG: chl:Chy400_4167 extracellular solute-binding protein family 1
YP_003243229.1	PFAM: extracellular solute-binding protein family 1; KEGG: cag:Cagg_0090 extracellular solute-binding protein family 1
YP_003243230.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ypg:YpAngola_A1069 LacI family sugar-binding transcriptional regulator
YP_003243232.1	PFAM: UspA domain protein; KEGG: bay:RBAM_036340 YxiE
YP_003243233.1	TIGRFAM: cyanate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_07970 hypothetical protein
YP_003243234.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: bbe:BBR47_07960 putative DNA-binding protein
YP_003243235.1	PFAM: regulatory protein TetR; KEGG: sgr:SGR_1633 TetR family transcriptional regulator
YP_003243236.1	PFAM: monooxygenase FAD-binding; KEGG: psb:Psyr_2377 hypothetical protein
YP_003243237.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA0853 bacitracin ABC transporter, ATP-binding protein
YP_003243238.1	KEGG: mac:MA0852 bacitracin ABC transporter, permease protein
YP_003243239.1	PFAM: copper amine oxidase domain protein; KEGG: bbe:BBR47_13630 hypothetical protein
YP_003243240.1	KEGG: bay:RBAM_005890 AdhB
YP_003243241.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; Coat F domain protein; KEGG: bsu:BSU26960 hypothetical protein
YP_003243242.1	PFAM: Protein of unknown function DUF2277; KEGG: bbe:BBR47_46870 hypothetical protein
YP_003243243.1	PFAM: coagulation factor 5/8 type domain protein; S-layer domain protein; KEGG: hmo:HM1_0137 multidomain protein with S-layer homology region, glug motif, ig motif, I-set domain, pkd domain
YP_003243244.1	PFAM: Glycoside hydrolase, family 20, catalytic core; S-layer domain protein; coagulation factor 5/8 type domain protein; KEGG: cpf:CPF_1614 glycosy hydrolase family protein
YP_003243245.1	KEGG: saq:Sare_4368 serine-type D-Ala-D-Ala carboxypeptidase
YP_003243246.1	KEGG: pjd:Pjdr2_4582 hypothetical protein
YP_003243247.1	PFAM: copper amine oxidase domain protein; KEGG: dae:Dtox_4298 copper amine oxidase domain protein
YP_003243248.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: amu:Amuc_1810 transcriptional regulator, MerR family
YP_003243249.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_1136 aldo/keto reductase
YP_003243252.1	PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: bcl:ABC3797 hypothetical protein
YP_003243253.1	PFAM: phospholipase/Carboxylesterase; KEGG: npu:Npun_F5261 dienelactone hydrolase
YP_003243255.1	PFAM: aminoglycoside phosphotransferase; KEGG: bsu:BSU06640 hypothetical protein
YP_003243257.1	KEGG: bay:RBAM_026190 YjdF
YP_003243259.1	PFAM: copper amine oxidase domain protein; KEGG: dae:Dtox_3690 copper amine oxidase domain protein
YP_003243260.1	PFAM: response regulator receiver; regulatory protein LuxR; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; regulatory protein LuxR; KEGG: bcb:BCB4264_A3228 two-component protein kinase
YP_003243261.1	KEGG: bcb:BCB4264_A3227 hypothetical protein
YP_003243262.1	PFAM: Erythromycin esterase; KEGG: bcb:BCB4264_A3148 hypothetical protein
YP_003243263.1	PFAM: Protein of unknown function DUF2207, membrane; KEGG: bld:BLi00351 hypothetical protein
YP_003243265.1	KEGG: fjo:Fjoh_2446 hypothetical protein
YP_003243266.1	PFAM: Catalase related subgroup; Catalase domain protein; KEGG: pjd:Pjdr2_2987 catalase
YP_003243267.1	KEGG: pjd:Pjdr2_5203 oxidoreductase domain protein
YP_003243268.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_5204 oxidoreductase domain protein
YP_003243269.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5202 transcriptional regulator, AraC family
YP_003243270.1	PFAM: DNA polymerase beta domain protein region; KEGG: kol:Kole_0078 hypothetical protein
YP_003243272.1	KEGG: pjd:Pjdr2_3933 hypothetical protein
YP_003243273.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: btk:BT9727_3273 alcohol dehydrogenase, zinc-containing
YP_003243274.1	PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein ArsR; KEGG: eat:EAT1b_0255 transcriptional regulator, ArsR family
YP_003243275.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pjd:Pjdr2_3247 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003243276.1	PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3246 transcriptional regulator, AraC family
YP_003243277.1	PFAM: periplasmic binding protein; KEGG: pjd:Pjdr2_3245 periplasmic binding protein
YP_003243278.1	PFAM: major facilitator superfamily MFS_1; KEGG: bpu:BPUM_0759 major facilitator transporter
YP_003243279.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: lsp:Bsph_2172 transcriptional regulator
YP_003243280.1	KEGG: sen:SACE_3470 dual specificity protein phosphatase
YP_003243281.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: abc:ACICU_01927 dihydrofolate reductase
YP_003243283.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bce:BC3548 short chain dehydrogenase
YP_003243284.1	PFAM: regulatory protein TetR; KEGG: bcx:BCA_1101 transcriptional regulator, TetR family
YP_003243285.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_003243286.1	PFAM: peptidase S51 dipeptidase E; KEGG: hau:Haur_1935 peptidase S51 dipeptidase E
YP_003243287.1	KEGG: cai:Caci_1241 hypothetical protein
YP_003243288.1	KEGG: ami:Amir_2407 hypothetical protein
YP_003243289.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cur:cur_1729 putative ABC transport system, ATP-binding protein
YP_003243290.1	PFAM: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; KEGG: gtn:GTNG_1959 sensor protein VanS
YP_003243291.1	PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: lsp:Bsph_4479 alkaline phosphatase synthesis transcriptional regulatory protein
YP_003243292.1	KEGG: bcv:Bcav_4129 hypothetical protein
YP_003243293.1	KEGG: bcv:Bcav_4130 hypothetical protein
YP_003243295.1	KEGG: bca:BCE_2612 hypothetical protein
YP_003243296.1	PFAM: regulatory protein TetR; KEGG: cce:Ccel_2855 transcriptional regulator, TetR family
YP_003243297.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_5067 histidine kinase
YP_003243298.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_5068 two component transcriptional regulator, AraC family
YP_003243299.1	PFAM: FAD dependent oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: pjd:Pjdr2_5069 putative protein involved in invasion
YP_003243300.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5070 extracellular solute-binding protein family 1
YP_003243301.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5071 binding-protein-dependent transport systems inner membrane component
YP_003243302.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5072 binding-protein-dependent transport systems inner membrane component
YP_003243303.1	KEGG: esi:Exig_1371 hypothetical protein
YP_003243304.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: rpc:RPC_3882 phytanoyl-CoA dioxygenase
YP_003243305.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: afl:Aflv_1180 transcriptional regulator containing HTH domain, AraC family
YP_003243306.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcv:Bcav_1870 extracellular solute-binding protein family 1
YP_003243307.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1873 binding-protein-dependent transport systems inner membrane component
YP_003243308.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1872 binding-protein-dependent transport systems inner membrane component
YP_003243309.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_0954 putative sensor with HAMP domain
YP_003243310.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: csc:Csac_0124 response regulator receiver protein
YP_003243311.1	KEGG: pjd:Pjdr2_1944 hypothetical protein
YP_003243312.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: afl:Aflv_1180 transcriptional regulator containing HTH domain, AraC family
YP_003243313.1	PFAM: protein of unknown function LppY and LpqO; KEGG: bbe:BBR47_09770 hypothetical protein
YP_003243314.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: sen:SACE_6341 deaminase-reductase domain-containing protein
YP_003243315.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: fre:Franean1_6617 deaminase-reductase domain-containing protein
YP_003243316.1	PFAM: FAD linked oxidase domain protein; D-arabinono-14-lactone oxidase; KEGG: pjd:Pjdr2_3940 FAD linked oxidase domain protein
YP_003243317.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: cce:Ccel_1251 two component transcriptional regulator, AraC family
YP_003243318.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: cce:Ccel_1250 signal transduction histidine kinase, LytS
YP_003243319.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_1254 binding-protein-dependent transport systems inner membrane component
YP_003243320.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_1253 binding-protein-dependent transport systems inner membrane component
YP_003243321.1	PFAM: extracellular solute-binding protein family 1; KEGG: cce:Ccel_1252 extracellular solute-binding protein family 1
YP_003243322.1	PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bha:BH1874 alpha-L-arabinosidase
YP_003243323.1	PFAM: glycoside hydrolase family 43; KEGG: bha:BH3683 xylan beta-1,4-xylosidase
YP_003243324.1	KEGG: bcl:ABC1110 hypothetical protein; TIGRFAM: dehydratase, YjhG/YagF family; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_003243325.1	PFAM: Aldehyde Dehydrogenase; KEGG: gka:GK1966 aldehyde dehydrogenase
YP_003243326.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: gtn:GTNG_1866 hypothetical protein
YP_003243327.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bcl:ABC0553 AraC/XylS family transcriptional regulator
YP_003243328.1	KEGG: pjd:Pjdr2_4274 alpha-L-fucosidase
YP_003243329.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3163 extracellular solute-binding protein family 1
YP_003243330.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3162 binding-protein-dependent transport systems inner membrane component
YP_003243331.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3161 binding-protein-dependent transport systems inner membrane component
YP_003243332.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3159 transcriptional regulator, AraC family
YP_003243333.1	KEGG: bsu:BSU18150 hypothetical protein
YP_003243334.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cgt:cgR_2454 hypothetical protein
YP_003243335.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_2996 transcriptional regulator, AraC family
YP_003243336.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4253 extracellular solute-binding protein family 1
YP_003243337.1	PFAM: protein of unknown function DUF1680; KEGG: pjd:Pjdr2_1987 protein of unknown function DUF1680
YP_003243338.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_4263 ABC transporter related
YP_003243339.1	KEGG: hypothetical protein
YP_003243340.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_4263 ABC transporter related
YP_003243341.1	PFAM: putative esterase; KEGG: cpi:Cpin_4242 putative esterase
YP_003243342.1	KEGG: pjd:Pjdr2_1531 hypothetical protein
YP_003243343.1	PFAM: glycoside hydrolase family 43; KEGG: pjd:Pjdr2_4261 glycoside hydrolase family 43
YP_003243344.1	KEGG: gtn:GTNG_1774 intra-cellular xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10
YP_003243345.1	KEGG: pjd:Pjdr2_4244 cellulase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10
YP_003243346.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4254 two component transcriptional regulator, AraC family
YP_003243347.1	PFAM: Carbohydrate binding family 6; glycoside hydrolase family 43; SMART: cellulose binding type IV; KEGG: pjd:Pjdr2_4267 carbohydrate binding family 6
YP_003243348.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_4268 two component transcriptional regulator, AraC family
YP_003243349.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4269 putative sensor with HAMP domain
YP_003243350.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4270 extracellular solute-binding protein family 1
YP_003243351.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4245 binding-protein-dependent transport systems inner membrane component
YP_003243352.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4246 binding-protein-dependent transport systems inner membrane component
YP_003243353.1	KEGG: pjd:Pjdr2_4247 hypothetical protein
YP_003243354.1	KEGG: dtu:Dtur_1591 NHL repeat containing protein
YP_003243355.1	PFAM: NHL repeat containing protein; KEGG: hypothetical protein
YP_003243356.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4250 binding-protein-dependent transport systems inner membrane component
YP_003243357.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4251 binding-protein-dependent transport systems inner membrane component
YP_003243358.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4252 extracellular solute-binding protein family 1
YP_003243359.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4253 extracellular solute-binding protein family 1
YP_003243360.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4254 two component transcriptional regulator, AraC family
YP_003243361.1	PFAM: Chloramphenicol phosphotransferase family protein; KEGG: cpy:Cphy_3626 chloramphenicol 3-O-phosphotransferase-like protein
YP_003243362.1	KEGG: bcr:BCAH187_A2829 putative uridine kinase
YP_003243363.1	PFAM: DinB family protein; KEGG: sth:STH936 hypothetical protein
YP_003243364.1	KEGG: sma:SAV_5504 hypothetical protein
YP_003243365.1	KEGG: cpy:Cphy_0658 hypothetical protein
YP_003243366.1	PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1146 transcriptional regulator, AraC family
YP_003243367.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pjd:Pjdr2_1147 protein of unknown function DUF6 transmembrane
YP_003243368.1	PFAM: copper amine oxidase domain protein; KEGG: hypothetical protein
YP_003243369.1	PFAM: copper amine oxidase domain protein; leucine-rich repeat protein; KEGG: lmc:Lm4b_00461 internalin A
YP_003243370.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_5277 oxidoreductase domain protein
YP_003243371.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: hypothetical protein
YP_003243372.1	PFAM: histidine kinase HAMP region domain protein; histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: cce:Ccel_1250 signal transduction histidine kinase, LytS
YP_003243373.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0950 binding-protein-dependent transport systems inner membrane component
YP_003243374.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_1253 binding-protein-dependent transport systems inner membrane component
YP_003243375.1	PFAM: extracellular solute-binding protein family 1; KEGG: cce:Ccel_1252 extracellular solute-binding protein family 1
YP_003243376.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cdf:CD2018 AraC family transcription regulator
YP_003243377.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: hor:Hore_04640 ADP-ribosylation/crystallin J1
YP_003243378.1	PFAM: LytTr DNA-binding region; KEGG: gwc:GWCH70_2811 response regulator receiver protein
YP_003243379.1	KEGG: gwc:GWCH70_2810 hypothetical protein
YP_003243380.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6967 ABC transporter related
YP_003243381.1	PFAM: ABC-2 type transporter; KEGG: sgr:SGR_4416 putative ABC transporter permease protein
YP_003243382.1	PFAM: helix-turn-helix HxlR type; KEGG: pjd:Pjdr2_6196 transcriptional regulator, HxlR family
YP_003243383.1	KEGG: pjd:Pjdr2_6197 DoxX family protein
YP_003243384.1	PFAM: regulatory protein TetR; KEGG: oih:OB0719 transcriptional regulator
YP_003243385.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spi:MGAS10750_Spy1701 tetronasin resistance ATP-binding protein
YP_003243386.1	KEGG: spi:MGAS10750_Spy1702 tetronasin resistance transmembrane protein
YP_003243387.1	KEGG: acp:A2cp1_4017 hypothetical protein
YP_003243388.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gtn:GTNG_0183 response regulator
YP_003243389.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gtn:GTNG_0182 sensory transduction histidine kinase
YP_003243390.1	KEGG: hypothetical protein
YP_003243391.1	PFAM: peptidase S41; SMART: peptidase S41; KEGG: sus:Acid_1599 peptidase S41
YP_003243393.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_0431 two component transcriptional regulator, AraC family
YP_003243394.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_0430 histidine kinase
YP_003243395.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_0200 extracellular solute-binding protein family 1
YP_003243396.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0201 binding-protein-dependent transport systems inner membrane component
YP_003243397.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_0202 binding-protein-dependent transport systems inner membrane component
YP_003243398.1	KEGG: gtn:GTNG_1570 hypothetical protein
YP_003243399.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: pjd:Pjdr2_4230 RarD protein, DMT superfamily transporter
YP_003243400.1	PFAM: GTPase EngC; KEGG: cth:Cthe_1516 ribosome small subunit-dependent GTPase A
YP_003243401.1	PFAM: aminoglycoside phosphotransferase; protein of unknown function DUF227; KEGG: pjd:Pjdr2_1637 GCN5-related N-acetyltransferase
YP_003243402.1	KEGG: bcv:Bcav_3335 carbohydrate-binding CenC domain protein
YP_003243403.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_0700 ABC transporter related
YP_003243404.1	PFAM: ABC-2 type transporter; KEGG: pjd:Pjdr2_0701 ABC-2 type transporter
YP_003243405.1	PFAM: Protein of unknown function DUF2268, Zn-dependent protease-related; KEGG: bcl:ABC3976 Zn-dependent protease
YP_003243406.1	KEGG: lsp:Bsph_0504 hypothetical protein
YP_003243407.1	PFAM: protein of unknown function DUF1232; KEGG: cyn:Cyan7425_4882 protein of unknown function DUF1232
YP_003243408.1	KEGG: pjd:Pjdr2_3219 hypothetical protein
YP_003243409.1	KEGG: pjd:Pjdr2_3218 putative NADH-flavin reductase-like protein
YP_003243410.1	PFAM: helix-turn-helix HxlR type; KEGG: pjd:Pjdr2_3217 transcriptional regulator, HxlR family
YP_003243411.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: pjd:Pjdr2_5210 phytanoyl-CoA dioxygenase
YP_003243412.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pdi:BDI_1324 transcriptional regulator
YP_003243414.1	PFAM: conserved hypothetical protein; KEGG: dhd:Dhaf_1682 hypothetical protein
YP_003243415.1	PFAM: conserved hypothetical protein; KEGG: dhd:Dhaf_1681 hypothetical protein
YP_003243416.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pjd:Pjdr2_0551 mandelate racemase/muconate lactonizing protein
YP_003243417.1	PFAM: OsmC family protein; KEGG: bcm:Bcenmc03_6182 OsmC family protein
YP_003243418.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH3212 hypothetical protein
YP_003243419.1	KEGG: tte:TTE2526 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003243420.1	KEGG: tte:TTE2525 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003243421.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_46260 ABC transporter permease protein
YP_003243422.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_46270 ABC transporter permease protein
YP_003243423.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbe:BBR47_46280 ABC transporter substrate binding protein
YP_003243424.1	PFAM: dihydrodipicolinate synthetase; KEGG: rha:RHA1_ro07087 dihydrodipicolinate synthase
YP_003243425.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcl:ABC3267 drug/metabolite transporter (DMT) superfamily protein
YP_003243426.1	PFAM: DinB family protein; KEGG: pjd:Pjdr2_3111 DinB family protein
YP_003243427.1	KEGG: cai:Caci_4721 hypothetical protein
YP_003243428.1	PFAM: histidine kinase A domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gtn:GTNG_1959 sensor protein VanS
YP_003243430.1	PFAM: protein of unknown function DUF214; KEGG: cbe:Cbei_2050 hypothetical protein
YP_003243431.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbe:Cbei_2049 ABC transporter related
YP_003243432.1	PFAM: VanZ family protein; KEGG: pjd:Pjdr2_4601 VanZ family protein
YP_003243433.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: oih:OB0358 two-component sensor histidine kinase
YP_003243434.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cbe:Cbei_2047 two component transcriptional regulator
YP_003243435.1	PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF1228; KEGG: rpc:RPC_0241 major facilitator transporter
YP_003243436.1	PFAM: polysaccharide deacetylase; KEGG: csc:Csac_2009 polysaccharide deacetylase
YP_003243437.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_6073 transcriptional regulator, LysR family
YP_003243438.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bld:BLi02188 YvmB
YP_003243439.1	PFAM: nitroreductase; KEGG: bcy:Bcer98_0644 nitroreductase
YP_003243440.1	KEGG: bha:BH2085 hypothetical protein
YP_003243441.1	KEGG: afl:Aflv_1611 hypothetical protein
YP_003243442.1	PFAM: transcription activator effector binding; KEGG: bcx:BCA_3509 hypothetical protein
YP_003243443.1	PFAM: metallophosphoesterase; S-layer domain protein; KEGG: pjd:Pjdr2_4682 metallophosphoesterase
YP_003243444.1	Catalyzes the deamination of cytosine to uracil and ammonia
YP_003243445.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bcl:ABC4033 cytosine permease
YP_003243446.1	KEGG: cbi:CLJ_B0712 hypothetical protein
YP_003243447.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bbe:BBR47_45040 hypothetical protein
YP_003243448.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cpy:Cphy_2230 AraC family transcriptional regulator
YP_003243449.1	PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: bcl:ABC1387 epoxide hydrolase 1
YP_003243452.1	KEGG: bcv:Bcav_0173 lipolytic protein G-D-S-L family
YP_003243453.1	KEGG: bcv:Bcav_1867 fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_003243454.1	PFAM: glycosidase PH1107-related; KEGG: dps:DP2454 hypothetical protein
YP_003243455.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2006 binding-protein-dependent transport systems inner membrane component
YP_003243456.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2005 binding-protein-dependent transport systems inner membrane component
YP_003243457.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_2004 extracellular solute-binding protein family 1
YP_003243458.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_2003 two component transcriptional regulator, AraC family
YP_003243459.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_2002 putative sensor with HAMP domain
YP_003243460.1	TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: bcg:BCG9842_B1541 transposase, family
YP_003243461.1	PFAM: glycoside hydrolase family 28; Cadherin; SMART: Cadherin; KEGG: hypothetical protein
YP_003243462.1	KEGG: bld:BLi00469 hypothetical protein
YP_003243463.1	KEGG: lmh:LMHCC_1725 hypothetical protein
YP_003243464.1	KEGG: bcb:BCB4264_A5239 hypothetical protein
YP_003243465.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: pjd:Pjdr2_2511 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003243466.1	PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: hau:Haur_2874 helix-turn-helix type 11 domain-containing protein
YP_003243467.1	PFAM: extracellular solute-binding protein family 1; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: kol:Kole_0693 extracellular solute-binding protein family 1
YP_003243468.1	KEGG: phe:Phep_0342 dipeptidyl aminopeptidase/acylaminoacyl-peptidase
YP_003243469.1	KEGG: phe:Phep_0351 hypothetical protein
YP_003243470.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ote:Oter_2890 glutamine--scyllo-inositol transaminase
YP_003243471.1	KEGG: bcv:Bcav_3338 hypothetical protein
YP_003243472.1	PFAM: extracellular solute-binding protein family 1; KEGG: bld:BLi01384 hypothetical protein
YP_003243473.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpu:BPUM_2666 ABC transporter ATP-binding protein
YP_003243474.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2090 hypothetical protein
YP_003243475.1	PFAM: Heparinase II/III family protein; KEGG: bcv:Bcav_3391 heparinase II/III family protein
YP_003243476.1	KEGG: bwe:BcerKBAB4_1701 beta-lactamase inhibitory protein II
YP_003243477.1	KEGG: cpy:Cphy_2164 hypothetical protein
YP_003243478.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bbe:BBR47_27350 probable transcriptional regulator
YP_003243479.1	PFAM: ABC-2 type transporter; KEGG: bwe:BcerKBAB4_3147 ABC-2 type transporter
YP_003243480.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcg:BCG9842_B1807 ABC transporter, ATP-binding protein
YP_003243481.1	PFAM: conserved hypothetical protein; KEGG: bcg:BCG9842_B1806 hypothetical protein
YP_003243482.1	PFAM: transcriptional regulator PadR family protein; KEGG: bcq:BCQ_3243 possible transcriptional regulator, PadR family
YP_003243483.1	PFAM: glycoside hydrolase family 43; KEGG: xca:xccb100_0166 exported xylan 1,4-beta-xylosidase / alpha-N-arabinofuranosidase
YP_003243484.1	PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase internal region; glycoside hydrolase family 2 sugar binding; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: bbe:BBR47_07560 two-component hybrid sensor and regulator
YP_003243485.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_1475 transcriptional regulator, LysR family
YP_003243486.1	PFAM: alpha/beta hydrolase fold; KEGG: pjd:Pjdr2_1474 alpha/beta hydrolase fold protein
YP_003243487.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_11970 hypothetical protein
YP_003243488.1	KEGG: bbe:BBR47_37940 hypothetical protein
YP_003243489.1	PFAM: ribosomal protein S14; KEGG: bld:BLi00952 30S ribosomal protein S14
YP_003243490.1	PFAM: periplasmic solute binding protein; KEGG: bha:BH2760 hypothetical protein
YP_003243491.1	PFAM: ABC-3 protein; KEGG: pjd:Pjdr2_3066 ABC-3 protein
YP_003243492.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU02860 hypothetical protein
YP_003243493.1	TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: bha:BH3780 50S ribosomal protein L31 type B
YP_003243494.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi00582 PaiA
YP_003243495.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcl:ABC3242 MarR family transcriptional regulator
YP_003243497.1	KEGG: pjd:Pjdr2_2926 hypothetical protein
YP_003243498.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cdf:CD0486 two-component response regulator
YP_003243499.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: cdf:CD0485 two-component sensor histidine kinase
YP_003243500.1	PFAM: beta-lactamase; KEGG: ami:Amir_3698 beta-lactamase
YP_003243501.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_3672 drug resistance transporter, Bcr/CflA subfamily
YP_003243502.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pjd:Pjdr2_3697 alcohol dehydrogenase GroES domain protein
YP_003243503.1	PFAM: regulatory protein TetR; KEGG: pjd:Pjdr2_3698 transcriptional regulator, TetR family
YP_003243504.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pfs:PFLU3949 hypothetical protein
YP_003243505.1	KEGG: pjd:Pjdr2_1141 hypothetical protein
YP_003243506.1	KEGG: cth:Cthe_1678 hypothetical protein
YP_003243507.1	PFAM: amino acid permease-associated region; KEGG: bbe:BBR47_03050 hypothetical protein
YP_003243508.1	PFAM: metallophosphoesterase; KEGG: pjd:Pjdr2_0542 metallophosphoesterase
YP_003243509.1	PFAM: small multidrug resistance protein; protein of unknown function DUF6 transmembrane; KEGG: pjd:Pjdr2_0541 small multidrug resistance protein
YP_003243510.1	PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: pjd:Pjdr2_0540 transcriptional regulator, DeoR family
YP_003243511.1	KEGG: pjd:Pjdr2_6130 hypothetical protein
YP_003243512.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3153 molybdate ABC transporter, inner membrane subunit
YP_003243513.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_2815 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_003243514.1	TIGRFAM: DNA binding domain protein, excisionase family; KEGG: pjd:Pjdr2_2814 DNA binding domain protein, excisionase family
YP_003243515.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bsu:BSU32660 hypothetical protein
YP_003243516.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: lsp:Bsph_2759 putative DNA-binding protein
YP_003243517.1	PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: bsu:BSU18830 phosphoenolpyruvate synthase
YP_003243518.1	KEGG: afl:Aflv_1611 hypothetical protein
YP_003243519.1	PFAM: transcription activator effector binding; KEGG: bca:BCE_3443 hypothetical protein
YP_003243520.1	PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: bwe:BcerKBAB4_3145 helix-turn-helix type 11 domain-containing protein
YP_003243521.1	PFAM: DinB family protein; KEGG: aca:ACP_1945 DinB family protein
YP_003243522.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: bbe:BBR47_33250 hypothetical protein
YP_003243523.1	KEGG: dhd:Dhaf_3620 hypothetical protein
YP_003243524.1	KEGG: bgl:bglu_1g32560 beta and gamma crystallin
YP_003243525.1	KEGG: ana:all5006 hypothetical protein
YP_003243526.1	KEGG: bbe:BBR47_43250 hypothetical protein
YP_003243527.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbe:BBR47_43240 transcriptional regulator
YP_003243528.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbe:BBR47_42870 hypothetical protein
YP_003243529.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bbe:BBR47_44310 probable transcriptional regulator
YP_003243530.1	PFAM: penicillin-binding protein transpeptidase; KEGG: bsu:BSU02090 hypothetical protein
YP_003243531.1	PFAM: alpha/beta hydrolase fold; KEGG: pmo:Pmob_0519 alpha/beta hydrolase fold
YP_003243532.1	KEGG: bld:BLi00294 YcbO
YP_003243533.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcu:BCAH820_4648 bacitracin ABC transporter, ATP-binding protein
YP_003243534.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcl:ABC1170 two-component sensor histidine kinase
YP_003243535.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH0820 two-component response regulator
YP_003243536.1	KEGG: bce:BC2695 outer membrane protein RomA
YP_003243537.1	PFAM: regulatory protein TetR; KEGG: npu:Npun_R5583 TetR family transcriptional regulator
YP_003243538.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: dae:Dtox_1332 transcriptional regulator, MerR family
YP_003243539.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_3029 aldo/keto reductase
YP_003243540.1	PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU05190 hypothetical protein
YP_003243542.1	PFAM: regulatory protein ArsR; Rhodanese domain protein; SMART: regulatory protein ArsR; Rhodanese domain protein; KEGG: lsp:Bsph_3341 ArsR family transcriptional regulator
YP_003243543.1	PFAM: Domain of unknown function DUF1801; KEGG: bha:BH2088 hypothetical protein
YP_003243544.1	KEGG: pjd:Pjdr2_4906 hypothetical protein
YP_003243546.1	KEGG: pjd:Pjdr2_2957 UvrD/Rep family helicase
YP_003243547.1	PFAM: Squalene/phytoene synthase; KEGG: pjd:Pjdr2_5389 squalene/phytoene synthase
YP_003243548.1	KEGG: aoe:Clos_2042 hypothetical protein
YP_003243549.1	PFAM: major facilitator superfamily MFS_1; KEGG: dae:Dtox_3139 major facilitator superfamily MFS_1
YP_003243550.1	PFAM: aminoglycoside phosphotransferase; KEGG: pjd:Pjdr2_6200 aminoglycoside phosphotransferase
YP_003243551.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: pjd:Pjdr2_4657 ADP-ribosyl-(dinitrogen reductase) hydrolase
YP_003243552.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbe:BBR47_33670 hypothetical protein
YP_003243553.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_3070 GCN5-related N-acetyltransferase
YP_003243554.1	KEGG: bld:BLi02093 hypothetical protein
YP_003243555.1	KEGG: esi:Exig_0177 cysteine ABC transporter permease/ATP-binding protein; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003243556.1	KEGG: esi:Exig_0176 cysteine ABC transporter permease/ATP-binding protein; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003243557.1	KEGG: oih:OB1049 cytochrome d ubiquinol oxidase subunit II
YP_003243558.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gwc:GWCH70_0552 cytochrome bd ubiquinol oxidase subunit I
YP_003243559.1	PFAM: Disulphide bond formation protein DsbB; KEGG: gtn:GTNG_0511 putative disulfide oxidoreductase
YP_003243561.1	KEGG: ade:Adeh_1176 hypothetical protein
YP_003243562.1	TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_2774 heavy metal translocating P-type ATPase
YP_003243563.1	PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cpy:Cphy_3142 AraC family transcriptional regulator
YP_003243564.1	PFAM: Domain of unknown function DUF1801; KEGG: bld:BLi03403 YdhG
YP_003243565.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bcl:ABC0845 oxidoreductase
YP_003243566.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_28510 putative excinuclease ABC subunit A
YP_003243567.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bcl:ABC0847 hypothetical protein
YP_003243568.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bcl:ABC0848 ArsR family transcriptional regulator
YP_003243569.1	PFAM: Integral membrane protein TerC; KEGG: bwe:BcerKBAB4_1578 integral membrane protein TerC
YP_003243570.1	KEGG: coc:Coch_0120 hypothetical protein
YP_003243571.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: lmc:Lm4b_01804 transcription regulator
YP_003243572.1	KEGG: bcy:Bcer98_1063 hypothetical protein
YP_003243573.1	KEGG: spc:Sputcn32_1194 hypothetical protein
YP_003243574.1	PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bcl:ABC1426 arginase
YP_003243575.1	PFAM: helix-turn-helix HxlR type; KEGG: bld:BLi00585 hypothetical protein
YP_003243576.1	PFAM: protein of unknown function DUF323; KEGG: bha:BH0900 transcriptional regulator (enhancement of xylanase A production)
YP_003243577.1	PFAM: glycoside hydrolase family 11; KEGG: pjd:Pjdr2_4664 endo-1,4-beta-xylanase
YP_003243578.1	PFAM: protein of unknown function DUF1061; KEGG: bld:BLi02797 hypothetical protein
YP_003243579.1	TIGRFAM: H+ Antiporter protein; PFAM: major facilitator superfamily MFS_1; KEGG: dhd:Dhaf_2526 H+ antiporter protein
YP_003243580.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ckr:CKR_2319 hypothetical protein
YP_003243581.1	SMART: helix-turn-helix domain protein; KEGG: bld:BLi01580 YozG
YP_003243582.1	KEGG: bld:BLi01581 YoaS
YP_003243584.1	PFAM: glycoside hydrolase family 16; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: eat:EAT1b_1784 glycoside hydrolase family 16
YP_003243585.1	KEGG: bbe:BBR47_26980 hypothetical protein
YP_003243586.1	PFAM: major facilitator superfamily MFS_1; KEGG: lsp:Bsph_1346 hypothetical protein
YP_003243587.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_0209 major facilitator superfamily MFS_1
YP_003243588.1	PFAM: regulatory protein TetR; KEGG: bcu:BCAH820_3345 transcriptional regulator, TetR family
YP_003243589.1	SMART: phosphoesterase PHP domain protein; KEGG: pjd:Pjdr2_2850 PHP domain protein
YP_003243590.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpu:BPUM_2666 ABC transporter ATP-binding protein
YP_003243591.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2848 binding-protein-dependent transport systems inner membrane component
YP_003243592.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_2847 extracellular solute-binding protein family 1
YP_003243593.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pjd:Pjdr2_2846 transcriptional regulator, LacI family
YP_003243594.1	KEGG: fba:FIC_01409 hypothetical protein
YP_003243595.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gwc:GWCH70_0924 6-phosphogluconate dehydrogenase NAD-binding
YP_003243596.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1800 transcriptional regulator, AraC family
YP_003243597.1	KEGG: ote:Oter_3131 hypothetical protein
YP_003243598.1	PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0482 lipoprotein
YP_003243599.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU30170 hypothetical protein
YP_003243600.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4102 binding-protein-dependent transport systems inner membrane component
YP_003243601.1	KEGG: dfe:Dfer_5721 protein of unknown function DUF187
YP_003243602.1	PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: pjd:Pjdr2_5134 glycoside hydrolase family 2 sugar binding
YP_003243603.1	PFAM: glycoside hydrolase family 43; KEGG: pjd:Pjdr2_5014 glycoside hydrolase family 43
YP_003243604.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5015 binding-protein-dependent transport systems inner membrane component
YP_003243605.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5016 binding-protein-dependent transport systems inner membrane component
YP_003243606.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5017 extracellular solute-binding protein family 1
YP_003243607.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_0682 regulatory protein GntR HTH
YP_003243608.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_0682 regulatory protein GntR HTH
YP_003243609.1	KEGG: pjd:Pjdr2_1621 hypothetical protein
YP_003243610.1	KEGG: pjd:Pjdr2_2823 hypothetical protein
YP_003243611.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pjd:Pjdr2_5371 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003243613.1	TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; KEGG: bay:RBAM_008350 SspH
YP_003243614.1	PFAM: metallophosphoesterase; KEGG: bfs:BF3026 hypothetical protein
YP_003243615.1	KEGG: lin:lin2213 hypothetical protein; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3
YP_003243616.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: bcx:BCA_4902 transcriptional regulator, DeoR family
YP_003243617.1	PFAM: protein of unknown function DUF336; KEGG: svi:Svir_19040 ATP:cob(I)alamin adenosyltransferase
YP_003243618.1	PFAM: alpha/beta hydrolase fold; KEGG: bwe:BcerKBAB4_2198 alpha/beta hydrolase fold
YP_003243619.1	KEGG: art:Arth_0438 hypothetical protein
YP_003243620.1	KEGG: bbe:BBR47_58720 hypothetical protein
YP_003243622.1	KEGG: hypothetical protein
YP_003243623.1	PFAM: regulatory protein GntR HTH; extracellular solute-binding protein family 1; SMART: regulatory protein GntR HTH; KEGG: rrs:RoseRS_3149 extracellular solute-binding protein
YP_003243624.1	PFAM: dihydrodipicolinate synthetase; KEGG: dda:Dd703_0301 dihydrodipicolinate synthetase
YP_003243625.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: atc:AGR_pAT_578 phosphoglycerate dehydrogenase (SerA)
YP_003243626.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tro:trd_1675 inner membrane ABC transporter permease protein YcjP
YP_003243627.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tro:trd_1674 putative sugar uptake ABC transporter permease protein
YP_003243628.1	PFAM: extracellular solute-binding protein family 1; KEGG: tro:trd_1138 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor
YP_003243629.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_0947 two component transcriptional regulator, AraC family
YP_003243630.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_0948 putative sensor with HAMP domain
YP_003243631.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3597 extracellular solute-binding protein family 1
YP_003243632.1	PFAM: copper amine oxidase domain protein; KEGG: bbe:BBR47_07470 hypothetical protein
YP_003243633.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC3900 hypothetical protein
YP_003243634.1	can hydrolyze p-nitrophenyl sulfate; contains a specific cysteine that is converted into C{alpha]-formylglycine upon activation with the anaerobic sulfatase-maturase
YP_003243635.1	KEGG: efa:EF2262 hypothetical protein
YP_003243636.1	PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: pjd:Pjdr2_4709 FAD linked oxidase domain protein
YP_003243637.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: lba:Lebu_1754 aspartate racemase
YP_003243638.1	PFAM: protein of unknown function DUF45; KEGG: pjd:Pjdr2_4662 protein of unknown function DUF45
YP_003243639.1	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system
YP_003243640.1	KEGG: hmo:HM1_2920 peptidase M56, blar1 domain protein
YP_003243641.1	TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: bcy:Bcer98_3652 export-related chaperone CsaA
YP_003243642.1	PFAM: N-acetyltransferase; KEGG: cai:Caci_7697 N-acetyltransferase
YP_003243643.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bbe:BBR47_06180 probable transcriptional regulator
YP_003243644.1	KEGG: pjd:Pjdr2_4976 hypothetical protein
YP_003243645.1	TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: cce:Ccel_2485 L-lactate dehydrogenase
YP_003243646.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bpu:BPUM_0492 homoserine/threonine resistance transporter
YP_003243647.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: bwe:BcerKBAB4_2254 XRE family transcriptional regulator
YP_003243648.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5096 binding-protein-dependent transport systems inner membrane component
YP_003243649.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5095 ABC transporter related
YP_003243650.1	PFAM: NMT1/THI5 like domain protein; KEGG: pjd:Pjdr2_5094 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
YP_003243651.1	KEGG: bca:BCE_3063 hypothetical protein
YP_003243652.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pjd:Pjdr2_5092 transcriptional regulator, MarR family
YP_003243653.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: cpy:Cphy_2262 N-acylglucosamine 2-epimerase
YP_003243654.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pjd:Pjdr2_2153 transcriptional regulator, LacI family
YP_003243655.1	PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU05800 hypothetical protein
YP_003243656.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bay:RBAM_005590 hypothetical protein
YP_003243657.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bbe:BBR47_15160 putative transcriptional regulator
YP_003243659.1	PFAM: aminotransferase class I and II; KEGG: pjd:Pjdr2_1408 aminotransferase class I and II
YP_003243660.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_1328 major facilitator superfamily MFS_1
YP_003243662.1	PFAM: protein of unknown function DUF326; KEGG: bcu:BCAH820_B0272 ferredoxin
YP_003243663.1	PFAM: chloramphenicol acetyltransferase; KEGG: bbe:BBR47_14680 chloramphenicol acetyltransferase
YP_003243664.1	PFAM: copper amine oxidase domain protein; PKD domain containing protein; KEGG: pjd:Pjdr2_3328 copper amine oxidase domain protein
YP_003243665.1	PFAM: Phosphoglycerate mutase; KEGG: cpy:Cphy_3303 phosphoglycerate mutase
YP_003243666.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gfo:GFO_0849 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein
YP_003243667.1	KEGG: pjd:Pjdr2_1643 hypothetical protein
YP_003243668.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_2026 GCN5-related N-acetyltransferase
YP_003243669.1	PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: ara:Arad_3535 methyltransferase protein
YP_003243670.1	KEGG: cbh:CLC_0775 hypothetical protein
YP_003243671.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: hypothetical protein
YP_003243672.1	PFAM: regulatory protein TetR; KEGG: pjd:Pjdr2_3244 transcriptional regulator, TetR family
YP_003243673.1	KEGG: lmh:LMHCC_0464 DNA-binding protein
YP_003243674.1	KEGG: bpu:BPUM_0395 hypothetical protein
YP_003243675.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bbe:BBR47_03240 hypothetical protein
YP_003243676.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gwc:GWCH70_0545 cation diffusion facilitator family transporter
YP_003243678.1	PFAM: extracellular solute-binding protein family 5; KEGG: pjd:Pjdr2_5539 extracellular solute-binding protein family 5
YP_003243679.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_003243680.1	PFAM: Catalase related subgroup; ThiJ/PfpI domain protein; Catalase domain protein; KEGG: bsu:BSU39050 catalase 2
YP_003243681.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pjd:Pjdr2_1880 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003243682.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pjd:Pjdr2_1879 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003243683.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bbe:BBR47_08470 probable transcriptional regulator
YP_003243684.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbe:BBR47_08460 hypothetical protein
YP_003243685.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: abo:ABO_2593 glycine cleavage system H protein
YP_003243686.1	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: afl:Aflv_0915 glycine cleavage system aminomethyltransferase T
YP_003243687.1	PFAM: Glycine cleavage system P-protein-like; KEGG: gka:GK2424 glycine dehydrogenase subunit 1
YP_003243688.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein
YP_003243689.1	KEGG: bwe:BcerKBAB4_4191 peptidase
YP_003243690.1	PFAM: N-acetyltransferase; KEGG: pjd:Pjdr2_3277 N-acetyltransferase
YP_003243691.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bbe:BBR47_05470 guanine deaminase
YP_003243692.1	KEGG: pjd:Pjdr2_3964 hypothetical protein
YP_003243693.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bcq:BCQ_5003 multidrug resistance ABC transporter, ATP-binding and permease
YP_003243695.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bbe:BBR47_29960 two-component response regulator
YP_003243696.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bbe:BBR47_29950 probable two-component sensor histidine kinase
YP_003243697.1	KEGG: pjd:Pjdr2_0231 hypothetical protein
YP_003243698.1	PFAM: GCN5-related N-acetyltransferase; KEGG: lsp:Bsph_3275 YbbJ
YP_003243699.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sth:STH1427 ABC transporter ATP-binding protein
YP_003243700.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sth:STH1426 ABC transporter ATP-binding protein
YP_003243702.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: pjd:Pjdr2_3028 tetratricopeptide TPR_2 repeat protein
YP_003243703.1	PFAM: MMPL domain protein; KEGG: pjd:Pjdr2_0319 MmpL domain protein
YP_003243704.1	PFAM: regulatory protein TetR; KEGG: btl:BALH_2144 TetR family transcriptional regulator
YP_003243705.1	PFAM: nitroreductase; KEGG: bbe:BBR47_32600 putative NAD(P)H nitroreductase
YP_003243706.1	PFAM: protein of unknown function UPF0074; KEGG: pjd:Pjdr2_4973 transcriptional regulator, BadM/Rrf2 family
YP_003243707.1	TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bpu:BPUM_3006 CPA1 family monovalent cation:proton (H+) antiporter-1
YP_003243708.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003243709.1	PFAM: regulatory protein TetR; KEGG: pjd:Pjdr2_6045 transcriptional regulator, TetR family
YP_003243710.1	PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: bbe:BBR47_03640 transcriptional regulator
YP_003243711.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cbe:Cbei_3532 NADPH dehydrogenase NamA
YP_003243712.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: pjd:Pjdr2_1954 transcriptional regulator, LacI family
YP_003243713.1	PFAM: Myo-inositol catabolism IolB domain protein; KEGG: pjd:Pjdr2_1953 myo-inositol catabolism IolB domain protein
YP_003243714.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_1952 oxidoreductase domain protein
YP_003243715.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: pjd:Pjdr2_1951 methylmalonate-semialdehyde dehydrogenase
YP_003243716.1	PFAM: PfkB domain protein; KEGG: pjd:Pjdr2_1950 PfkB domain protein
YP_003243717.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_1949 myo-inosose-2 dehydratase
YP_003243718.1	PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pjd:Pjdr2_1948 thiamine pyrophosphate protein central region
YP_003243719.1	PFAM: glycosyl hydrolase family 88; KEGG: pjd:Pjdr2_1733 glycosyl hydrolase family 88
YP_003243720.1	KEGG: pjd:Pjdr2_1732 hypothetical protein
YP_003243721.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1729 binding-protein-dependent transport systems inner membrane component
YP_003243722.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1728 binding-protein-dependent transport systems inner membrane component
YP_003243723.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1727 extracellular solute-binding protein family 1
YP_003243724.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1726 transcriptional regulator, AraC family
YP_003243725.1	PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: pjd:Pjdr2_3541 oxidoreductase domain protein
YP_003243726.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3543 transcriptional regulator, AraC family
YP_003243727.1	PFAM: Heparinase II/III family protein; KEGG: atc:AGR_L_3558 hypothetical protein
YP_003243728.1	PFAM: Heparinase II/III family protein; KEGG: sco:SCO3501 hypothetical protein
YP_003243729.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rxy:Rxyl_3007 short-chain dehydrogenase/reductase SDR
YP_003243730.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: cpy:Cphy_0772 integral membrane sensor signal transduction histidine kinase
YP_003243731.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: hypothetical protein
YP_003243732.1	PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein
YP_003243733.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bfa:Bfae_29180 carbohydrate ABC transporter membrane protein
YP_003243734.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_0773 binding-protein-dependent transport systems inner membrane component
YP_003243735.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: bcj:BCAS0173 putative tautomerase
YP_003243736.1	PFAM: glycosyl hydrolase family 88; KEGG: pjd:Pjdr2_2071 glycosyl hydrolase family 88
YP_003243737.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_3011 histidine kinase
YP_003243738.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pjd:Pjdr2_3010 two component transcriptional regulator, winged helix family
YP_003243739.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc03811 hypothetical protein
YP_003243740.1	PFAM: oxidoreductase domain protein; KEGG: sme:SMc03812 putative oxidoreductase protein
YP_003243741.1	PFAM: inner-membrane translocator; KEGG: bbe:BBR47_06820 galactoside ABC transporter permease protein
YP_003243742.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_4330 ABC transporter related
YP_003243743.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bbe:BBR47_06800 D-galactose ABC transporter substrate binding protein precursor
YP_003243744.1	KEGG: pjd:Pjdr2_4332 periplasmic binding protein/LacI transcriptional regulator
YP_003243745.1	PFAM: histidine kinase internal region; Cache domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4333 cache sensor signal transduction histidine kinase
YP_003243746.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4334 two component transcriptional regulator, AraC family
YP_003243747.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cbe:Cbei_1760 MATE efflux family protein
YP_003243748.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
YP_003243749.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_5928 transcriptional regulator, LysR family
YP_003243750.1	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: pjd:Pjdr2_5929 dihydrodipicolinate synthase
YP_003243751.1	KEGG: bsu:BSU13990 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_003243752.1	KEGG: similar to zinc finger protein
YP_003243753.1	PFAM: protein of unknown function DUF218; KEGG: nth:Nther_2167 protein of unknown function DUF218
YP_003243754.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU17520 hypothetical protein
YP_003243756.1	KEGG: bbe:BBR47_03980 protease inhibitor BBRPI precursor
YP_003243757.1	PFAM: protein of unknown function DUF28; KEGG: bay:RBAM_007230 hypothetical protein
YP_003243758.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_51320 hypothetical protein
YP_003243759.1	hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide
YP_003243760.1	TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bsu:BSU33440 hypothetical protein
YP_003243761.1	PFAM: protein of unknown function DUF147; Protein of unknown function, YojJ-like; KEGG: bbe:BBR47_26610 hypothetical protein
YP_003243762.1	PFAM: LmbE family protein; KEGG: pjd:Pjdr2_0936 LmbE family protein
YP_003243763.1	KEGG: pjd:Pjdr2_0935 hypothetical protein
YP_003243764.1	PFAM: protein of unknown function DUF523; KEGG: lsp:Bsph_1763 hypothetical protein
YP_003243765.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bbe:BBR47_46590 probable transcriptional regulator
YP_003243766.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_5135 oxidoreductase domain protein
YP_003243767.1	PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1883 transcriptional regulator, AraC family
YP_003243768.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_1882 oxidoreductase domain protein
YP_003243769.1	KEGG: bwe:BcerKBAB4_2443 metal-dependent hydrolase
YP_003243770.1	PFAM: aldo/keto reductase; KEGG: sme:SM_b20648 putative oxidoreductase protein
YP_003243771.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: amt:Amet_1547 GntR family transcriptional regulator
YP_003243772.1	KEGG: bha:BH1891 hypothetical protein
YP_003243773.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pjd:Pjdr2_2714 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003243774.1	KEGG: bcr:BCAH187_A5185 DedA protein
YP_003243775.1	PFAM: Monogalactosyldiacylglycerol synthase; glycosyl transferase group 1; Glycosyltransferase 28 domain; KEGG: dhd:Dhaf_3178 monogalactosyldiacylglycerol synthase
YP_003243776.1	PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: afl:Aflv_0415 membrane-associated phospholipid phosphatase
YP_003243777.1	KEGG: bbe:BBR47_44320 hypothetical membrane protein
YP_003243778.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cbe:Cbei_1814 HAD family hydrolase
YP_003243779.1	KEGG: mja:MJ1230 hypothetical protein
YP_003243780.1	KEGG: pjd:Pjdr2_4007 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_003243782.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_3526 GCN5-related N-acetyltransferase
YP_003243783.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bcx:BCA_4903 phosphoglycolate phosphatase
YP_003243784.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ppf:Pput_0857 GCN5-related N-acetyltransferase
YP_003243785.1	PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: fra:Francci3_4135 methyltransferase type 11
YP_003243786.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_2169 GCN5-related N-acetyltransferase
YP_003243787.1	KEGG: bld:BLi02005 hypothetical protein
YP_003243788.1	KEGG: pjd:Pjdr2_0368 hypothetical protein
YP_003243789.1	KEGG: bcb:BCB4264_A2122 hypothetical protein
YP_003243790.1	PFAM: GCN5-related N-acetyltransferase; KEGG: hau:Haur_3089 GCN5-related N-acetyltransferase
YP_003243791.1	KEGG: bbe:BBR47_07740 hypothetical protein
YP_003243792.1	KEGG: ssa:SSA_1572 hypothetical protein
YP_003243794.1	PFAM: protein of unknown function DUF1312; KEGG: tpd:Teth39_0236 hypothetical protein
YP_003243795.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: lsp:Bsph_0702 YbbB, ABC-type Fe3+-hydroxamate transport system, periplasmic component
YP_003243797.1	KEGG: mpt:Mpe_A2654 hypothetical protein
YP_003243800.1	PFAM: GCN5-related N-acetyltransferase; KEGG: oih:OB0294 hypothetical protein
YP_003243801.1	KEGG: oih:OB0250 hypothetical protein
YP_003243802.1	PFAM: Alcohol acetyltransferase; KEGG: amt:Amet_1520 hypothetical protein
YP_003243803.1	KEGG: drm:Dred_0643 polysaccharide deacetylase
YP_003243804.1	PFAM: Fibronectin type III domain protein; KEGG: hypothetical protein
YP_003243805.1	PFAM: Fibronectin type III domain protein; Carbohydrate-binding family V/XII; glycoside hydrolase family 18; SMART: Fibronectin type III domain protein; chitinase II; Carbohydrate-binding family V/XII; KEGG: sma:SAV_3258 chitinase A
YP_003243806.1	KEGG: cce:Ccel_2651 hypothetical protein
YP_003243807.1	KEGG: dhd:Dhaf_4921 hypothetical protein
YP_003243808.1	KEGG: hor:Hore_13640 hypothetical protein
YP_003243810.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: pjd:Pjdr2_3759 hypothetical protein
YP_003243811.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pjd:Pjdr2_3194 short-chain dehydrogenase/reductase SDR
YP_003243812.1	PFAM: Radical SAM domain protein; KEGG: bbe:BBR47_41900 hypothetical protein
YP_003243813.1	PFAM: Protein of unknown function DUF2086; KEGG: bbe:BBR47_41890 hypothetical protein
YP_003243814.1	KEGG: bsu:BSU01820 O6-methylguanine-DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein
YP_003243815.1	KEGG: bbe:BBR47_03220 AdaA protein; PFAM: Ada metal-binding domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_003243816.1	KEGG: bbe:BBR47_03210 DNA-3-methyladenine glycosylase II; PFAM: 8-oxoguanine DNA glycosylase domain protein; HhH-GPD family protein; SMART: HhH-GPD family protein
YP_003243818.1	PFAM: H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: pjd:Pjdr2_4713 F0F1-type ATP synthase beta subunit-like protein
YP_003243819.1	KEGG: fre:Franean1_1620 hypothetical protein
YP_003243820.1	PFAM: Acetamidase/Formamidase; KEGG: kra:Krad_4153 acetamidase/formamidase
YP_003243821.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: hor:Hore_04570 transcriptional regulator, LacI family
YP_003243822.1	KEGG: pjd:Pjdr2_5449 hypothetical protein
YP_003243823.1	KEGG: scl:sce1308 terpenoid cylases/protein prenyltransferase-domain-containing protein
YP_003243824.1	KEGG: gau:GAU_0690 hypothetical protein
YP_003243825.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1710 binding-protein-dependent transport systems inner membrane component
YP_003243826.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_1709 binding-protein-dependent transport systems inner membrane component
YP_003243827.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcv:Bcav_1708 extracellular solute-binding protein family 1
YP_003243828.1	KEGG: bcv:Bcav_1707 carbohydrate-binding protein
YP_003243829.1	KEGG: sen:SACE_2137 hypothetical protein
YP_003243830.1	catalyzes the phosphorylation of ribulose to ribulose 5-phosphate
YP_003243831.1	catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose
YP_003243832.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bcr:BCAH187_A3220 ribose operon repressor
YP_003243833.1	KEGG: bcl:ABC0576 hypothetical protein
YP_003243834.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hypothetical protein
YP_003243835.1	PFAM: aminoglycoside phosphotransferase; KEGG: abc:ACICU_01948 aminoglycoside phosphotransferase
YP_003243836.1	KEGG: cbk:CLL_A2670 putative lipoprotein
YP_003243837.1	PFAM: Phosphoglycerate mutase; KEGG: bcb:BCB4264_A4471 putative phosphoglycerate mutase family
YP_003243838.1	KEGG: pjd:Pjdr2_0622 helix-turn-helix domain protein
YP_003243839.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bvi:Bcep1808_3368 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003243840.1	KEGG: rxy:Rxyl_0886 hypothetical protein
YP_003243841.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pjd:Pjdr2_5452 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003243842.1	PFAM: protein of unknown function DUF1680; KEGG: pjd:Pjdr2_5028 protein of unknown function DUF1680
YP_003243843.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5029 transcriptional regulator, AraC family
YP_003243844.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bcq:BCQ_3193 possible oxidoreductase (short chain dehydrogenase/reductase family)
YP_003243845.1	PFAM: aldo/keto reductase; KEGG: gtn:GTNG_0780 2,5-diketo-D-gluconic acid reductase
YP_003243846.1	PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bsu:BSU29040 hypothetical protein
YP_003243847.1	PFAM: helix-turn-helix HxlR type; KEGG: bsu:BSU29030 hypothetical protein
YP_003243848.1	PFAM: periplasmic binding protein; KEGG: bld:BLi02844 hypothetical protein
YP_003243849.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cby:CLM_0382 lipid A export ATP-binding/permease protein MsbA
YP_003243850.1	PFAM: transport system permease protein; KEGG: bbe:BBR47_44910 probable ABC transporter permease protein
YP_003243851.1	PFAM: transport system permease protein; KEGG: bbe:BBR47_44920 probable ABC transporter permease protein
YP_003243852.1	PFAM: Cl- channel voltage-gated family protein; KEGG: pjd:Pjdr2_3532 chloride channel core
YP_003243853.1	KEGG: pjd:Pjdr2_5969 hypothetical protein
YP_003243854.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5968 ABC transporter related
YP_003243855.1	PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_5967 transcriptional regulator, GntR family
YP_003243856.1	PFAM: copper amine oxidase domain protein; Protein of unknown function DUF2233, periplasmic; KEGG: cpo:COPRO5265_1457 copper amine oxidase N-domain family
YP_003243857.1	KEGG: pjd:Pjdr2_3086 hypothetical protein
YP_003243858.1	KEGG: sma:SAV_3204 hypothetical protein
YP_003243859.1	PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: hypothetical protein
YP_003243860.1	PFAM: LamB/YcsF family protein; KEGG: bld:BLi00498 LamB/YcsF family protein
YP_003243861.1	KEGG: bha:BH1818 hypothetical protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2
YP_003243862.1	PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: bld:BLi00501 KipI
YP_003243864.1	PFAM: VWA containing CoxE family protein; KEGG: pjd:Pjdr2_3026 VWA containing CoxE family protein
YP_003243865.1	KEGG: pjd:Pjdr2_3025 hypothetical protein
YP_003243866.1	PFAM: ATPase associated with various cellular activities AAA_5; KEGG: pjd:Pjdr2_3024 ATPase associated with various cellular activities AAA_5
YP_003243867.1	KEGG: pjd:Pjdr2_3023 hypothetical protein
YP_003243868.1	PFAM: zinc finger SWIM domain protein; KEGG: pjd:Pjdr2_3022 zinc finger SWIM domain protein
YP_003243869.1	PFAM: metallophosphoesterase; KEGG: bcy:Bcer98_2046 metallophosphoesterase
YP_003243870.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC0664 sugar ABC transporter substrate-binding protein
YP_003243871.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2882 binding-protein-dependent transport systems inner membrane component
YP_003243872.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2881 binding-protein-dependent transport systems inner membrane component
YP_003243873.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_3059 drug resistance transporter, EmrB/QacA subfamily
YP_003243874.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bbe:BBR47_30580 probable transcriptional regulator
YP_003243875.1	PFAM: peptidase M29 aminopeptidase II; KEGG: bbe:BBR47_26620 aminopeptidase AmpS
YP_003243876.1	PFAM: S-layer domain protein; metallophosphoesterase; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: pjd:Pjdr2_4682 metallophosphoesterase
YP_003243877.1	PFAM: protein of unknown function DUF1697; KEGG: pjd:Pjdr2_1914 protein of unknown function DUF1697
YP_003243878.1	catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX
YP_003243879.1	PFAM: RelA/SpoT domain protein; KEGG: pjd:Pjdr2_5952 RelA/SpoT domain protein
YP_003243880.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bbe:BBR47_06980 hypothetical protein
YP_003243881.1	KEGG: pjd:Pjdr2_6183 putative monooxygenase
YP_003243882.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_6184 binding-protein-dependent transport systems inner membrane component
YP_003243883.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_6185 binding-protein-dependent transport systems inner membrane component
YP_003243884.1	KEGG: pjd:Pjdr2_6186 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_003243885.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_6187 ABC transporter related
YP_003243886.1	PFAM: thymidine kinase; KEGG: bcl:ABC3877 thymidine kinase
YP_003243887.1	KEGG: pjd:Pjdr2_0346 hypothetical protein
YP_003243888.1	PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: pjd:Pjdr2_5326 protein of unknown function DUF161
YP_003243889.1	PFAM: SNARE associated Golgi protein; KEGG: pjd:Pjdr2_0464 SNARE associated Golgi protein
YP_003243890.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bcu:BCAH820_0609 acetyltransferase, GNAT family
YP_003243891.1	TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: bcl:ABC0793 putative monovalent cation/H+ antiporter subunit G
YP_003243892.1	PFAM: multiple resistance and pH regulation protein F; KEGG: afl:Aflv_1947 multisubunit Na+/H+ antiporter, F subunit
YP_003243893.1	PFAM: cation antiporter; KEGG: bay:RBAM_028720 putative monovalent cation/H+ antiporter subunit E
YP_003243894.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gwc:GWCH70_2871 NADH dehydrogenase (quinone)
YP_003243895.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gwc:GWCH70_2872 NADH-ubiquinone oxidoreductase chain 4L
YP_003243896.1	TIGRFAM: monovalent cation/H+ antiporter, subunit 1; PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: bld:BLi03345 monovalent cation/H+ antiporter subunit A
YP_003243898.1	PFAM: SNARE associated Golgi protein; KEGG: pjd:Pjdr2_3331 SNARE associated Golgi protein
YP_003243899.1	KEGG: oih:OB3151 hypothetical protein
YP_003243901.1	KEGG: app:CAP2UW1_2840 hypothetical protein
YP_003243902.1	KEGG: pjd:Pjdr2_3049 hypothetical protein
YP_003243903.1	KEGG: ckr:CKR_2252 hypothetical protein
YP_003243904.1	PFAM: transcriptional regulator PadR family protein; KEGG: ckr:CKR_2253 hypothetical protein
YP_003243905.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: bcl:ABC2446 HAD superfamily hydrolase
YP_003243906.1	TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: bcl:ABC3764 PTS system, trehalose-specific enzyme II, BC component
YP_003243907.1	KEGG: bcl:ABC3765 sucrose-6-phosphate hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32
YP_003243908.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bcl:ABC3766 sucrose operon repressor
YP_003243909.1	PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: bcl:ABC3388 bifunctional protein FolD
YP_003243910.1	PFAM: permease; KEGG: pjd:Pjdr2_4884 permease
YP_003243911.1	PFAM: Protein of unknown function DUF1980; KEGG: bbe:BBR47_21170 hypothetical protein
YP_003243912.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bbe:BBR47_00970 hypothetical protein
YP_003243913.1	KEGG: pjd:Pjdr2_2988 hypothetical protein
YP_003243914.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bay:RBAM_037770 YdgJ
YP_003243915.1	PFAM: nitroreductase; KEGG: bsu:BSU05660 hypothetical protein
YP_003243916.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bpu:BPUM_3581 hypothetical protein
YP_003243917.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pjd:Pjdr2_3068 cobalamin synthesis protein P47K
YP_003243918.1	PFAM: Domain of unknown function DUF1801; KEGG: pjd:Pjdr2_0938 domain of unknown function DUF1801
YP_003243919.1	PFAM: regulatory protein ArsR; transcriptional regulator TrmB; SMART: regulatory protein ArsR; KEGG: pjd:Pjdr2_5544 transcriptional regulator, TrmB
YP_003243920.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pjd:Pjdr2_4592 activator of HSP90 ATPase 1 family protein
YP_003243921.1	PFAM: helix-turn-helix HxlR type; KEGG: pjd:Pjdr2_1186 transcriptional regulator, HxlR family
YP_003243922.1	TIGRFAM: 6-phospho 3-hexuloisomerase; PFAM: sugar isomerase (SIS); KEGG: pjd:Pjdr2_1184 6-phospho 3-hexuloisomerase
YP_003243923.1	TIGRFAM: 3-hexulose-6-phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: pjd:Pjdr2_1185 3-hexulose-6-phosphate synthase
YP_003243924.1	PFAM: Chloramphenicol phosphotransferase family protein; KEGG: aoe:Clos_0772 phosphotransferase (aminonucleoside antibiotic resistance)
YP_003243925.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pjd:Pjdr2_5327 periplasmic binding protein/LacI transcriptional regulator
YP_003243926.1	PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_5328 inner-membrane translocator
YP_003243927.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5329 ABC transporter related
YP_003243928.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pjd:Pjdr2_5330 periplasmic binding protein/LacI transcriptional regulator
YP_003243929.1	PFAM: histidine kinase internal region; Cache domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_5331 cache sensor signal transduction histidine kinase
YP_003243930.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5332 two component transcriptional regulator, AraC family
YP_003243931.1	PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: lsp:Bsph_0153 hypothetical protein
YP_003243932.1	KEGG: bbe:BBR47_03560 hypothetical protein
YP_003243933.1	PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: bwe:BcerKBAB4_2096 azobenzene reductase
YP_003243934.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bcq:BCQ_5252 DNA-binding response regulator
YP_003243935.1	KEGG: bcg:BCG9842_B5416 sensor histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein
YP_003243936.1	KEGG: pjd:Pjdr2_1352 hypothetical protein
YP_003243937.1	KEGG: pjd:Pjdr2_3140 hypothetical protein
YP_003243938.1	PFAM: Amidase; KEGG: pjd:Pjdr2_3091 amidase
YP_003243940.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_17800 ABC transporter ATP binding/permease protein
YP_003243941.1	KEGG: hba:Hbal_2739 redoxin domain protein
YP_003243942.1	KEGG: sat:SYN_03817 hypothetical protein
YP_003243943.1	KEGG: gka:GK1783 hypothetical protein
YP_003243944.1	KEGG: lsp:Bsph_2586 hypothetical protein
YP_003243945.1	PFAM: glycoside hydrolase family 43; KEGG: oih:OB2087 arabinofuranosidase
YP_003243946.1	PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1913 hypothetical protein
YP_003243947.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3735 transcriptional regulator, AraC family
YP_003243948.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF820; KEGG: dsy:DSY3642 hypothetical protein
YP_003243949.1	PFAM: protein of unknown function DUF74; KEGG: pjd:Pjdr2_3359 protein of unknown function DUF74
YP_003243951.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: btl:BALH_1671 sensor histidine kinase
YP_003243952.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: btl:BALH_1670 response regulator DrrA
YP_003243953.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: btl:BALH_1667 ABC transporter, ATP-binding protein
YP_003243954.1	KEGG: btl:BALH_1668 ABC transporter permease
YP_003243955.1	KEGG: btl:BALH_1669 hypothetical protein
YP_003243956.1	PFAM: conserved hypothetical protein; KEGG: lwe:lwe2392 hypothetical protein
YP_003243957.1	PFAM: RbsD or FucU transport; KEGG: pjd:Pjdr2_1349 RbsD or FucU transport
YP_003243958.1	PFAM: Carbohydrate kinase, FGGY-like; KEGG: pjd:Pjdr2_1348 carbohydrate kinase FGGY
YP_003243959.1	PFAM: class II aldolase/adducin family protein; KEGG: pjd:Pjdr2_1347 class II aldolase/adducin family protein
YP_003243960.1	catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose
YP_003243961.1	PFAM: Cupin 2 conserved barrel domain protein; AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1330 transcriptional regulator, AraC family
YP_003243962.1	PFAM: ferredoxin; KEGG: pjd:Pjdr2_2395 ferredoxin
YP_003243963.1	PFAM: copper amine oxidase domain protein; SMART: chitinase II; KEGG: pjd:Pjdr2_2721 copper amine oxidase domain protein
YP_003243964.1	PFAM: NLP/P60 protein; KEGG: pjd:Pjdr2_0116 NLP/P60 protein
YP_003243965.1	KEGG: btk:BT9727_5006 hypothetical protein
YP_003243966.1	PFAM: ROK family protein; KEGG: tpd:Teth39_2154 ROK family glucokinase
YP_003243967.1	PFAM: CutC family protein; KEGG: pjd:Pjdr2_3178 CutC family protein
YP_003243968.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: nse:NSE_0475 cytosol aminopeptidase
YP_003243969.1	KEGG: drm:Dred_2450 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003243970.1	KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003243971.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cti:RALTA_A1724 putative dipeptide ABC transporter, membrane component
YP_003243972.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_21890 putative ABC transporter permease protein
YP_003243973.1	PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc1380 substrate-binding periplasmic (PBP) ABC transporter protein
YP_003243974.1	PFAM: L-asparaginase II; KEGG: bbe:BBR47_45820 hypothetical protein
YP_003243975.1	PFAM: ROK family protein; SMART: regulatory protein Crp; KEGG: cce:Ccel_3430 ROK family protein
YP_003243976.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: oih:OB1730 ferredoxin [3Fe-4S][4Fe-4S]
YP_003243977.1	PFAM: regulatory protein ArsR; regulatory protein DeoR; KEGG: pjd:Pjdr2_2081 putative transcriptional regulator
YP_003243978.1	PFAM: glucose sorbosone dehydrogenase; KEGG: pjd:Pjdr2_5369 quinoprotein glucose dehydrogenase
YP_003243979.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: bbe:BBR47_38410 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
YP_003243981.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hau:Haur_0971 short-chain dehydrogenase/reductase SDR
YP_003243982.1	PFAM: protein of unknown function DUF162; KEGG: pjd:Pjdr2_3760 protein of unknown function DUF162
YP_003243983.1	TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: pjd:Pjdr2_3761 iron-sulfur cluster binding protein
YP_003243984.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pjd:Pjdr2_3762 protein of unknown function DUF224 cysteine-rich region domain protein
YP_003243985.1	PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: pjd:Pjdr2_3763 transcriptional regulator, DeoR family
YP_003243986.1	PFAM: Carbohydrate kinase, FGGY-like; KEGG: pjd:Pjdr2_3538 carbohydrate kinase FGGY
YP_003243987.1	catalyzes the formation of L-rhamnulose from L-rhamnose
YP_003243988.1	TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; class II aldolase/adducin family protein; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pjd:Pjdr2_3540 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
YP_003243989.1	KEGG: bwe:BcerKBAB4_4819 hypothetical protein
YP_003243990.1	KEGG: bcy:Bcer98_3602 hypothetical protein
YP_003243991.1	PFAM: protein of unknown function DUF909; KEGG: bwe:BcerKBAB4_4821 hypothetical protein
YP_003243992.1	KEGG: bbe:BBR47_12300 hypothetical membrane protein
YP_003243993.1	KEGG: hypothetical protein
YP_003243994.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; Redoxin domain protein; KEGG: afl:Aflv_1617 membrane-associated thiol-disulfide oxidoreductase
YP_003243995.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gwc:GWCH70_0864 GCN5-related N-acetyltransferase
YP_003243996.1	PFAM: pentapeptide repeat protein; KEGG: cac:CAC1657 hypothetical protein
YP_003243997.1	PFAM: oxidoreductase domain protein; KEGG: pjd:Pjdr2_1119 oxidoreductase domain protein
YP_003243998.1	KEGG: pjd:Pjdr2_1118 hypothetical protein
YP_003243999.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_1117 oxidoreductase domain protein
YP_003244000.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: mta:Moth_2024 LacI family transcription regulator
YP_003244001.1	PFAM: ROK family protein; KEGG: bwe:BcerKBAB4_3078 ROK family protein
YP_003244002.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_3015 major facilitator superfamily MFS_1
YP_003244003.1	PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: pjd:Pjdr2_5236 beta-galactosidase
YP_003244004.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_0751 transcriptional regulator, AraC family
YP_003244005.1	PFAM: DoxX family protein; KEGG: bcl:ABC3003 hypothetical protein
YP_003244006.1	KEGG: bca:BCE_2144 hypothetical protein
YP_003244007.1	KEGG: pjd:Pjdr2_5207 hypothetical protein
YP_003244008.1	PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: bha:BH1874 alpha-L-arabinosidase
YP_003244009.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_10910 amino acid ABC transporter ATP-binding protein
YP_003244010.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_10900 amino acid ABC transporter permease protein
YP_003244011.1	PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: bbe:BBR47_10890 amino acid ABC transporter substrate binding protein
YP_003244012.1	KEGG: pjd:Pjdr2_5910 hypothetical protein
YP_003244013.1	KEGG: bbe:BBR47_06220 hypothetical protein
YP_003244014.1	PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; KEGG: pjd:Pjdr2_2048 inorganic diphosphatase
YP_003244015.1	PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; KEGG: bhy:BHWA1_00923 UDP-N-acetylmuramate dehydrogenase
YP_003244016.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: pjd:Pjdr2_2244 RNA polymerase, sigma 70 subunit, RpoD subfamily
YP_003244017.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: pjd:Pjdr2_3158 glycoside hydrolase family 3 domain protein
YP_003244019.1	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: eat:EAT1b_1008 DegV family protein
YP_003244020.1	KEGG: bbe:BBR47_15930 hypothetical protein
YP_003244021.1	PFAM: Protein of unknown function DUF2087; KEGG: lsp:Bsph_1879 hypothetical protein
YP_003244022.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_0222 major facilitator superfamily MFS_1
YP_003244023.1	KEGG: pjd:Pjdr2_2731 hypothetical protein
YP_003244024.1	KEGG: pjd:Pjdr2_2730 hypothetical protein
YP_003244025.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: pjd:Pjdr2_2729 two component transcriptional regulator, LuxR family
YP_003244026.1	PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_2728 histidine kinase
YP_003244027.1	PFAM: VTC domain; KEGG: pjd:Pjdr2_2042 hypothetical protein
YP_003244028.1	KEGG: pjd:Pjdr2_2041 hypothetical protein
YP_003244029.1	PFAM: Spore coat protein CotH; KEGG: pjd:Pjdr2_2040 spore coat protein CotH
YP_003244031.1	PFAM: SNARE associated Golgi protein; KEGG: oih:OB1179 hypothetical protein
YP_003244032.1	KEGG: bwe:BcerKBAB4_2668 hypothetical protein
YP_003244033.1	KEGG: aoe:Clos_0356 hypothetical protein
YP_003244034.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bcr:BCAH187_A3665 hypothetical protein
YP_003244035.1	PFAM: DSBA oxidoreductase; KEGG: gwc:GWCH70_0177 DsbA oxidoreductase
YP_003244036.1	KEGG: cpy:Cphy_2386 uridine kinase
YP_003244037.1	KEGG: pjd:Pjdr2_0986 hypothetical protein
YP_003244038.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S15; KEGG: gwc:GWCH70_2781 BAAT/acyl-CoA thioester hydrolase
YP_003244039.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sub:SUB1769 acetyltransferase (GNAT) family protein
YP_003244040.1	PFAM: Endoribonuclease L-PSP; KEGG: tro:trd_A0663 endoribonuclease L-PSP
YP_003244041.1	PFAM: glycoside hydrolase family 18; S-layer domain protein; SMART: chitinase II; KEGG: pjd:Pjdr2_5379 S-layer domain protein
YP_003244042.1	KEGG: bwe:BcerKBAB4_2416 pullulanase, type I; TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_003244043.1	KEGG: pjd:Pjdr2_2675 hypothetical protein
YP_003244044.1	PFAM: protein of unknown function DUF58; KEGG: pjd:Pjdr2_2674 protein of unknown function DUF58
YP_003244045.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2673 ATPase associated with various cellular activities AAA_3
YP_003244046.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bay:RBAM_004360 YczJ
YP_003244047.1	KEGG: bbe:BBR47_15940 hypothetical protein
YP_003244048.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: bha:BH1493 reductase
YP_003244049.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bbe:BBR47_50610 putative chromate transport protein
YP_003244050.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_07970 hypothetical protein
YP_003244051.1	SMART: helix-turn-helix domain protein; KEGG: bbe:BBR47_56100 putative DNA-binding protein
YP_003244052.1	SMART: helix-turn-helix domain protein; KEGG: bbe:BBR47_56120 putative DNA-binding protein
YP_003244053.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5682 ABC transporter related
YP_003244054.1	PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_5683 inner-membrane translocator
YP_003244055.1	PFAM: protein of unknown function DUF534; KEGG: pjd:Pjdr2_5684 protein of unknown function DUF534
YP_003244056.1	PFAM: lipolytic protein G-D-S-L family; KEGG: pmo:Pmob_0436 GDSL family lipase
YP_003244057.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: pjd:Pjdr2_2029 rhodanese domain protein
YP_003244058.1	KEGG: bcl:ABC3175 hypothetical protein
YP_003244059.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003244061.1	PFAM: Domain of unknown function DUF2394; KEGG: pjd:Pjdr2_0347 6-phosphogluconolactonase
YP_003244063.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: pjd:Pjdr2_4725 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
YP_003244064.1	KEGG: pjd:Pjdr2_4724 2-oxoglutarate dehydrogenase, E1 subunit; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region
YP_003244065.1	PFAM: protein of unknown function DUF72; KEGG: bha:BH3455 hypothetical protein
YP_003244066.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: pjd:Pjdr2_3306 phosphodiesterase, MJ0936 family
YP_003244067.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: btl:BALH_2786 hypothetical protein
YP_003244068.1	PFAM: amino acid permease-associated region; Amino acid transporter transmembrane; KEGG: bha:BH2171 aromatic amino acid transporter
YP_003244069.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bbe:BBR47_49360 probable spore germination protein
YP_003244070.1	PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_6076 GerA spore germination protein
YP_003244071.1	TIGRFAM: germination protein, Ger(x)C family; KEGG: bcu:BCAH820_B0226 spore germination protein XC
YP_003244072.1	TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: pjd:Pjdr2_2009 PTS system, N-acetylglucosamine-specific IIBC subunit
YP_003244073.1	TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: pjd:Pjdr2_2010 PTS system, glucose subfamily, IIA subunit
YP_003244074.1	PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: pjd:Pjdr2_2011 transcriptional antiterminator, BglG
YP_003244075.1	PFAM: ATP-binding region ATPase domain protein; response regulator receiver; CHASE3 domain protein; GAF domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: lsp:Bsph_4702 two component system histidine kinase
YP_003244076.1	PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: bcl:ABC3380 hypothetical protein
YP_003244077.1	TIGRFAM: DivIVA domain; KEGG: lbu:LBUL_0922 cell division initiation protein
YP_003244078.1	TIGRFAM: sporulation protein, yteA family; KEGG: pjd:Pjdr2_3871 transcriptional regulator, TraR/DksA family
YP_003244079.1	PFAM: regulatory protein ArsR; KEGG: cpr:CPR_1606 transcriptional regulatory protein, putative
YP_003244080.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_51930 hypothetical membrane protein
YP_003244081.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: aac:Aaci_2618 oxidoreductase domain protein
YP_003244082.1	PFAM: replication terminator protein; transcriptional regulator PadR family protein; KEGG: gwc:GWCH70_1632 replication terminator protein
YP_003244083.1	PFAM: acyltransferase 3; KEGG: bbe:BBR47_30820 hypothetical protein
YP_003244084.1	KEGG: hypothetical protein
YP_003244085.1	KEGG: pjd:Pjdr2_3343 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_003244086.1	PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: sth:STH2668 glutamyl-tRNA synthetase
YP_003244087.1	PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: gwc:GWCH70_0398 hypothetical protein
YP_003244088.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003244089.1	KEGG: cdf:CD2025 putative ABC transporter, permease protein
YP_003244090.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lsp:Bsph_4533 bacitracin transport ATP-binding protein
YP_003244091.1	PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bcy:Bcer98_2910 regulatory protein GntR HTH
YP_003244092.1	KEGG: btl:BALH_1946 hypothetical protein
YP_003244093.1	KEGG: bcx:BCA_2272 hypothetical protein
YP_003244094.1	KEGG: hypothetical protein
YP_003244095.1	PFAM: protein of unknown function DUF909; KEGG: cac:CAC0410 hypothetical protein
YP_003244096.1	KEGG: bwe:BcerKBAB4_3218 hypothetical protein
YP_003244097.1	KEGG: bwe:BcerKBAB4_3219 hypothetical protein
YP_003244098.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: bwe:BcerKBAB4_2025 cell divisionFtsK/SpoIIIE
YP_003244100.1	KEGG: pjd:Pjdr2_4893 hypothetical protein
YP_003244102.1	PFAM: transcriptional regulator PadR family protein; KEGG: pjd:Pjdr2_2940 transcriptional regulator, PadR-like family
YP_003244103.1	PFAM: protein of unknown function DUF1700; KEGG: gtn:GTNG_0308 hypothetical protein
YP_003244104.1	KEGG: pjd:Pjdr2_6248 hypothetical protein
YP_003244105.1	FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds
YP_003244106.1	PFAM: Protein of unknown function DUF2087; KEGG: pjd:Pjdr2_5726 transcriptional regulator, ArsR family
YP_003244107.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: pjd:Pjdr2_2676 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003244108.1	PFAM: protein of unknown function DUF441; KEGG: plu:plu2726 hypothetical protein
YP_003244109.1	PFAM: UbiA prenyltransferase; KEGG: pjd:Pjdr2_0425 UbiA prenyltransferase
YP_003244110.1	TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: cpf:CPF_0237 HAD family hydrolase
YP_003244111.1	KEGG: cpf:CPF_0236 hypothetical protein
YP_003244112.1	KEGG: cac:CAC2502 permease
YP_003244113.1	KEGG: bbe:BBR47_31110 hypothetical membrane protein
YP_003244114.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bld:BLi00891 YgaD
YP_003244115.1	KEGG: pjd:Pjdr2_2677 hypothetical protein
YP_003244116.1	PFAM: NUDIX hydrolase; KEGG: lsp:Bsph_2972 MutT/NUDIX family protein
YP_003244117.1	PFAM: HesB/YadR/YfhF-family protein; KEGG: bha:BH2252 hypothetical protein
YP_003244119.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bca:BCE_0942 ABC transporter, ATP-binding/permease protein
YP_003244120.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5912 ABC transporter related
YP_003244121.1	PFAM: S-layer domain protein; KEGG: pjd:Pjdr2_3848 S-layer domain protein
YP_003244122.1	KEGG: shm:Shewmr7_3106 hypothetical protein
YP_003244123.1	KEGG: bcy:Bcer98_3425 ABC transporter, permease
YP_003244124.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcy:Bcer98_3424 ABC transporter-related protein
YP_003244125.1	PFAM: ROK family protein; KEGG: bha:BH1094 transcriptional repressor of the xylose operon
YP_003244126.1	PFAM: protein of unknown function DUF326; KEGG: bcu:BCAH820_B0272 ferredoxin
YP_003244127.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pjd:Pjdr2_1063 cobalamin synthesis protein P47K
YP_003244128.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: bsu:BSU29460 molybdopterin precursor biosynthesis protein B
YP_003244130.1	TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gwc:GWCH70_1341 quinone oxidoreductase, YhdH/YhfP family
YP_003244132.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate
YP_003244133.1	PFAM: isochorismatase hydrolase; KEGG: gwc:GWCH70_1537 isochorismatase hydrolase
YP_003244134.1	PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_4660 NUDIX hydrolase
YP_003244135.1	PFAM: protein of unknown function DUF1333; KEGG: pjd:Pjdr2_3369 protein of unknown function DUF1333
YP_003244136.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_003244137.1	PFAM: Propanediol utilization protein; KEGG: pjd:Pjdr2_3371 propanediol utilization protein
YP_003244138.1	PFAM: peptidase M19 renal dipeptidase; KEGG: pjd:Pjdr2_3374 membrane dipeptidase
YP_003244139.1	PFAM: Stage V sporulation protein S; KEGG: pjd:Pjdr2_3375 stage V sporulation protein S
YP_003244140.1	PFAM: metallophosphoesterase; KEGG: pjd:Pjdr2_3376 metallophosphoesterase
YP_003244141.1	KEGG: pjd:Pjdr2_3377 RNA binding metal dependent phosphohydrolase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: metal-dependent phosphohydrolase HD region; KH domain protein
YP_003244142.1	PFAM: regulatory protein RecX; KEGG: pjd:Pjdr2_3378 regulatory protein RecX
YP_003244143.1	KEGG: pjd:Pjdr2_3379 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase
YP_003244144.1	TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: pjd:Pjdr2_3380 competence/damage-inducible protein CinA
YP_003244145.1	KEGG: pjd:Pjdr2_3381 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003244146.1	PFAM: protein of unknown function DUF520; KEGG: pjd:Pjdr2_3382 protein of unknown function DUF520
YP_003244147.1	KEGG: dau:Daud_0531 hypothetical protein
YP_003244148.1	SMART: helix-turn-helix domain protein; KEGG: pjd:Pjdr2_3383 transcriptional regulator, XRE family
YP_003244149.1	KEGG: pjd:Pjdr2_3384 amino acid-binding ACT domain protein
YP_003244150.1	KEGG: pjd:Pjdr2_3385 hypothetical protein
YP_003244151.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pjd:Pjdr2_3386 short-chain dehydrogenase/reductase SDR
YP_003244152.1	PFAM: peptidase M16 domain protein; KEGG: pjd:Pjdr2_3387 peptidase M16 domain protein
YP_003244153.1	PFAM: peptidase M16 domain protein; KEGG: pjd:Pjdr2_3388 peptidase M16 domain protein
YP_003244154.1	TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein; KEGG: pjd:Pjdr2_3389 spore cortex-lytic enzyme
YP_003244155.1	PFAM: glycosyl hydrolase family 88; KEGG: bld:BLi03165 YteR
YP_003244156.1	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: pjd:Pjdr2_2925 altronate dehydratase
YP_003244157.1	catalyzes the formation of D-tagaturonate from D-altronate
YP_003244158.1	PFAM: Glucuronate isomerase; KEGG: pjd:Pjdr2_2923 glucuronate isomerase
YP_003244159.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: amt:Amet_0544 helix-turn-helix domain-containing protein
YP_003244160.1	PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; KEGG: pjd:Pjdr2_3390 cell divisionFtsK/SpoIIIE
YP_003244161.1	KEGG: pjd:Pjdr2_3391 hypothetical protein
YP_003244162.1	PFAM: peptidase S14 ClpP; KEGG: pjd:Pjdr2_3392 peptidase S14 ClpP
YP_003244163.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: pjd:Pjdr2_3393 beta-lactamase domain protein
YP_003244164.1	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: pjd:Pjdr2_3394 dihydrodipicolinate synthase
YP_003244165.1	TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: pjd:Pjdr2_3395 aspartate kinase, monofunctional class
YP_003244166.1	involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme
YP_003244167.1	catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance
YP_003244168.1	TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: pjd:Pjdr2_3398 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
YP_003244169.1	PFAM: peptidase M16 domain protein; KEGG: pjd:Pjdr2_3399 peptidase M16 domain protein
YP_003244170.1	PFAM: polysaccharide deacetylase; KEGG: pjd:Pjdr2_3400 polysaccharide deacetylase
YP_003244171.1	KEGG: pjd:Pjdr2_3401 polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; SMART: KH domain protein
YP_003244172.1	TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: pjd:Pjdr2_3402 ribosomal protein S15
YP_003244173.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: pjd:Pjdr2_3403 riboflavin biosynthesis protein RibF
YP_003244174.1	TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: pjd:Pjdr2_3404 tRNA pseudouridine synthase B
YP_003244175.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: pjd:Pjdr2_3405 phosphoesterase RecJ domain protein
YP_003244176.1	TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: pjd:Pjdr2_3406 ribosome-binding factor A
YP_003244177.1	TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; Miro domain protein; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; KEGG: pjd:Pjdr2_3407 translation initiation factor IF-2
YP_003244178.1	PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: pjd:Pjdr2_3408 ribosomal protein L7Ae/L30e/S12e/Gadd45
YP_003244179.1	PFAM: protein of unknown function DUF448; KEGG: pjd:Pjdr2_3409 protein of unknown function DUF448
YP_003244180.1	TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; KEGG: pjd:Pjdr2_3410 NusA antitermination factor
YP_003244181.1	PFAM: protein of unknown function DUF150; KEGG: pjd:Pjdr2_3411 protein of unknown function DUF150
YP_003244182.1	KEGG: pjd:Pjdr2_3412 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: Exonuclease; phosphoesterase PHP domain protein
YP_003244183.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_003244184.1	KEGG: pjd:Pjdr2_3414 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein
YP_003244185.1	KEGG: pjd:Pjdr2_3415 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein
YP_003244186.1	PFAM: phosphatidate cytidylyltransferase; KEGG: pjd:Pjdr2_3416 phosphatidate cytidylyltransferase
YP_003244187.1	KEGG: pjd:Pjdr2_3417 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_003244188.1	TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: pjd:Pjdr2_3418 ribosome recycling factor
YP_003244189.1	KEGG: pjd:Pjdr2_3419 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_003244190.1	TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: pjd:Pjdr2_3420 translation elongation factor Ts
YP_003244191.1	TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: pjd:Pjdr2_3421 ribosomal protein S2
YP_003244192.1	KEGG: pjd:Pjdr2_3422 hypothetical protein
YP_003244193.1	KEGG: pjd:Pjdr2_3423 hypothetical protein
YP_003244194.1	KEGG: pjd:Pjdr2_3424 hypothetical protein
YP_003244195.1	PFAM: protein of unknown function DUF342; KEGG: pjd:Pjdr2_3425 protein of unknown function DUF342
YP_003244196.1	TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 3 domain protein; KEGG: pjd:Pjdr2_3426 RNA polymerase, sigma 28 subunit, FliA/WhiG
YP_003244197.1	KEGG: pjd:Pjdr2_3427 hypothetical protein
YP_003244198.1	PFAM: CheD family protein; KEGG: pjd:Pjdr2_3428 CheD, stimulates methylation of MCP protein
YP_003244199.1	PFAM: CheC domain protein; KEGG: bbe:BBR47_34570 chemotaxis protein CheC
YP_003244200.1	PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: pjd:Pjdr2_3431 CheW protein
YP_003244201.1	PFAM: P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_3432 CheA signal transduction histidine kinase
YP_003244202.1	PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; KEGG: pjd:Pjdr2_3433 response regulator receiver modulated CheB methylesterase
YP_003244203.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pjd:Pjdr2_3434 cobyrinic acid ac-diamide synthase
YP_003244204.1	KEGG: bbe:BBR47_34620 probable flagellar biosynthesis protein FlhF; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase
YP_003244205.1	membrane protein involved in the flagellar export apparatus
YP_003244206.1	TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: pjd:Pjdr2_3437 flagellar biosynthetic protein FlhB
YP_003244207.1	TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: pjd:Pjdr2_3438 flagellar biosynthetic protein FliR
YP_003244208.1	TIGRFAM: flagellar biosynthetic protein FliQ; type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: pjd:Pjdr2_3439 flagellar biosynthetic protein FliQ
YP_003244209.1	TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: pjd:Pjdr2_3440 flagellar biosynthetic protein FliP
YP_003244210.1	KEGG: pjd:Pjdr2_3441 hypothetical protein
YP_003244211.1	PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pjd:Pjdr2_3442 response regulator receiver protein
YP_003244212.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: pjd:Pjdr2_3443 CheC, inhibitor of MCP methylation / FliN fusion protein
YP_003244213.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation
YP_003244214.1	PFAM: flagellar basal body-associated protein FliL; KEGG: pjd:Pjdr2_3446 hypothetical protein
YP_003244215.1	PFAM: flagellar FlbD family protein; KEGG: pjd:Pjdr2_3447 flagellar FlbD family protein
YP_003244216.1	TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: pjd:Pjdr2_3448 protein of unknown function DUF1078 domain protein
YP_003244217.1	TIGRFAM: flagellar operon protein; KEGG: pjd:Pjdr2_3449 flagellar operon protein
YP_003244218.1	PFAM: flagellar hook capping protein; KEGG: pjd:Pjdr2_3450 flagellar hook capping protein
YP_003244219.1	PFAM: flagellar hook-length control protein; KEGG: pjd:Pjdr2_3451 flagellar hook-length control protein
YP_003244220.1	KEGG: pjd:Pjdr2_3452 hypothetical protein
YP_003244221.1	TIGRFAM: flagellar export protein FliJ; KEGG: pjd:Pjdr2_3453 flagellar export protein FliJ
YP_003244222.1	KEGG: pjd:Pjdr2_3454 ATPase, FliI/YscN family; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase
YP_003244223.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: pjd:Pjdr2_3455 flagellar assembly protein FliH
YP_003244224.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_003244225.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_003244226.1	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: pjd:Pjdr2_3458 flagellar hook-basal body complex subunit FliE
YP_003244227.1	TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: pjd:Pjdr2_3459 flagellar basal-body rod protein FlgC
YP_003244228.1	TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: pjd:Pjdr2_3460 flagellar basal-body rod protein FlgB
YP_003244229.1	KEGG: pjd:Pjdr2_3462 heat shock protein HslVU, ATPase subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_003244230.1	heat shock protein involved in degradation of misfolded proteins
YP_003244231.1	KEGG: pjd:Pjdr2_3464 gid protein; TIGRFAM: gid protein; PFAM: glucose-inhibited division protein A
YP_003244232.1	KEGG: pjd:Pjdr2_3465 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein
YP_003244233.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pjd:Pjdr2_3466 DNA protecting protein DprA
YP_003244234.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; KEGG: pjd:Pjdr2_3467 succinyl-CoA synthetase, alpha subunit
YP_003244235.1	KEGG: pjd:Pjdr2_3468 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
YP_003244236.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: hypothetical protein
YP_003244237.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5617 binding-protein-dependent transport systems inner membrane component
YP_003244238.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3654 binding-protein-dependent transport systems inner membrane component
YP_003244239.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC0558 sugar ABC transporter substrate-binding protein
YP_003244240.1	KEGG: pjd:Pjdr2_3469 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase
YP_003244241.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A1998 acetyltransferase (GNAT) family protein
YP_003244242.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcl:ABC3500 hypothetical protein
YP_003244243.1	PFAM: protein of unknown function UPF0102; KEGG: pjd:Pjdr2_3470 protein of unknown function UPF0102
YP_003244244.1	KEGG: pjd:Pjdr2_3471 flagellar biosynthetic protein FlhB
YP_003244245.1	KEGG: pjd:Pjdr2_3472 hypothetical protein
YP_003244246.1	PFAM: ribonuclease HII/HIII; KEGG: pjd:Pjdr2_3474 ribonuclease H
YP_003244247.1	PFAM: Glycosyl hydrolase family 32 domain protein; Ricin B lectin; protein of unknown function DUF1080; SMART: glycoside hydrolase family 32; Ricin B lectin; KEGG: art:Arth_0404 levanase
YP_003244248.1	PFAM: ROK family protein; KEGG: pjd:Pjdr2_1191 ROK family protein
YP_003244249.1	PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: pjd:Pjdr2_5216 glycosyl hydrolase family 32 domain protein
YP_003244250.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5215 extracellular solute-binding protein family 1
YP_003244251.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5214 binding-protein-dependent transport systems inner membrane component
YP_003244252.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5213 binding-protein-dependent transport systems inner membrane component
YP_003244253.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: cbe:Cbei_3881 regulatory protein, LacI
YP_003244254.1	TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related; KEGG: pjd:Pjdr2_3475 GTP-binding protein HSR1-related
YP_003244255.1	KEGG: pjd:Pjdr2_3476 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region
YP_003244256.1	TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: pjd:Pjdr2_3477 ribosomal protein L19
YP_003244258.1	KEGG: pjd:Pjdr2_2517 collagen triple helix repeat protein
YP_003244259.1	KEGG: pjd:Pjdr2_2517 collagen triple helix repeat protein
YP_003244260.1	KEGG: pjd:Pjdr2_3480 tRNA (guanine-N1)-methyltransferase
YP_003244261.1	KEGG: pjd:Pjdr2_3481 16S rRNA processing protein RimM
YP_003244262.1	KEGG: pjd:Pjdr2_3482 hypothetical protein
YP_003244263.1	KEGG: pjd:Pjdr2_3483 ribosomal protein S16
YP_003244264.1	KEGG: pjd:Pjdr2_3484 signal recognition particle protein
YP_003244265.1	KEGG: pjd:Pjdr2_3485 putative helix-turn-helix protein YlxM/p13 family protein
YP_003244266.1	TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bcl:ABC2532 hemolysin
YP_003244267.1	PFAM: glycosyl transferase group 1; KEGG: sth:STH1376 hypothetical protein
YP_003244268.1	PFAM: glycosyl transferase family 2; KEGG: aac:Aaci_2791 glycosyl transferase family 2
YP_003244269.1	KEGG: hor:Hore_19370 hypothetical protein
YP_003244272.1	KEGG: pjd:Pjdr2_3486 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_003244273.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: pjd:Pjdr2_3487 chromosome segregation protein SMC
YP_003244274.1	KEGG: gka:GK1192 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein
YP_003244275.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: pjd:Pjdr2_3489 3-oxoacyl-(acyl-carrier-protein) synthase 2
YP_003244276.1	carries the fatty acid chain in fatty acid biosynthesis
YP_003244277.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pjd:Pjdr2_3491 3-oxoacyl-(acyl-carrier-protein) reductase
YP_003244278.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: pjd:Pjdr2_3492 malonyl CoA-acyl carrier protein transacylase
YP_003244279.1	KEGG: pjd:Pjdr2_3493 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_003244280.1	TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: pjd:Pjdr2_3494 fatty acid/phospholipid synthesis protein PlsX
YP_003244281.1	negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria
YP_003244282.1	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: pjd:Pjdr2_3496 ribosomal protein L32
YP_003244283.1	PFAM: protein of unknown function DUF177; KEGG: pjd:Pjdr2_3497 protein of unknown function DUF177
YP_003244284.1	PFAM: protein of unknown function DUF795; KEGG: pjd:Pjdr2_3498 protein of unknown function DUF795
YP_003244285.1	PFAM: peptidase S16 lon domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: bay:RBAM_014910 YlbL
YP_003244286.1	PFAM: nucleoside recognition domain protein; KEGG: pjd:Pjdr2_3500 hypothetical protein
YP_003244287.1	KEGG: pjd:Pjdr2_3501 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_003244288.1	TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: pjd:Pjdr2_3502 methyltransferase
YP_003244289.1	KEGG: pjd:Pjdr2_2179 hypothetical protein
YP_003244291.1	PFAM: copper amine oxidase domain protein; KEGG: pjd:Pjdr2_3661 copper amine oxidase domain protein
YP_003244292.1	KEGG: bli:BL02399 hypothetical protein
YP_003244293.1	KEGG: bpu:BPUM_0898 transposase
YP_003244294.1	SMART: Tetratricopeptide repeat; KEGG: pjd:Pjdr2_1450 TPR repeat-containing protein
YP_003244295.1	PFAM: lipolytic protein G-D-S-L family; KEGG: bld:BLi00504 YcsK
YP_003244296.1	PFAM: GCN5-related N-acetyltransferase; KEGG: btl:BALH_2624 acetyltransferase
YP_003244297.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bbe:BBR47_03700 transcriptional regulator
YP_003244298.1	KEGG: pjd:Pjdr2_2682 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase
YP_003244300.1	PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: lic:LIC13295 hypothetical protein
YP_003244302.1	PFAM: TraX family protein; KEGG: csc:Csac_0587 TraX family protein
YP_003244303.1	KEGG: mes:Meso_2038 hypothetical protein
YP_003244304.1	KEGG: fno:Fnod_0956 hypothetical protein
YP_003244305.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: eat:EAT1b_2179 transcriptional regulator, LacI family
YP_003244306.1	PFAM: major facilitator superfamily MFS_1; KEGG: kol:Kole_1041 major facilitator superfamily MFS_1
YP_003244307.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pjd:Pjdr2_5325 glycerophosphoryl diester phosphodiesterase
YP_003244308.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pjd:Pjdr2_2505 transcriptional regulator, MarR family
YP_003244309.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_06080 hypothetical protein
YP_003244310.1	PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH3309 multidrug resistance protein
YP_003244311.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bbe:BBR47_04250 putative methyl-accepting chemotaxis protein
YP_003244312.1	KEGG: pjd:Pjdr2_2255 hypothetical protein
YP_003244313.1	PFAM: protein of unknown function DUF939; KEGG: pjd:Pjdr2_0461 protein of unknown function DUF939
YP_003244314.1	PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pjd:Pjdr2_5541 phosphoesterase PA-phosphatase related
YP_003244315.1	PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: bld:BLi00677 YhfK
YP_003244316.1	TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; KEGG: pjd:Pjdr2_4147 tRNA 2-selenouridine synthase
YP_003244317.1	TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: pjd:Pjdr2_4148 selenide, water dikinase
YP_003244318.1	PFAM: permease; KEGG: spe:Spro_0523 permease
YP_003244319.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pjd:Pjdr2_0444 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_003244320.1	KEGG: pjd:Pjdr2_5188 hypothetical protein
YP_003244321.1	TIGRFAM: conserved hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_4509 hypothetical protein
YP_003244322.1	PFAM: Aldose 1-epimerase; KEGG: pjd:Pjdr2_5027 aldose 1-epimerase
YP_003244323.1	PFAM: FAD dependent oxidoreductase; KEGG: bca:BCE_1126 glycerol-3-phosphate dehydrogenase, aerobic
YP_003244324.1	TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: esi:Exig_0715 glycerol kinase
YP_003244325.1	PFAM: ROK family protein; KEGG: bbe:BBR47_17100 probable transcriptional regulator
YP_003244326.1	PFAM: extracellular solute-binding protein family 1; KEGG: oih:OB3424 hypothetical protein
YP_003244327.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB3423 sugar binding-protein dependent transporter system permease
YP_003244328.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB3422 sugar binding-protein dependent transporter system permease
YP_003244329.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bbe:BBR47_17140 putative oxidoreductase
YP_003244330.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bbe:BBR47_17150 putative oxidoreductase
YP_003244331.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bbe:BBR47_17160 putative oxidoreductase
YP_003244332.1	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: oih:OB2863 succinate-semialdehyde dehydrogenase
YP_003244333.1	PFAM: periplasmic binding protein; KEGG: bcy:Bcer98_0362 periplasmic binding protein
YP_003244334.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcy:Bcer98_0361 ABC transporter-related protein
YP_003244335.1	PFAM: transport system permease protein; KEGG: bbe:BBR47_57010 ABC transporter permease protein
YP_003244336.1	PFAM: transport system permease protein; KEGG: bsu:BSU03800 hypothetical protein
YP_003244337.1	PFAM: nitroreductase; KEGG: bcz:pE33L466_0369 nitroreductase family protein
YP_003244338.1	PFAM: YKOF domain protein; KEGG: bsu:BSU13240 hypothetical protein
YP_003244340.1	PFAM: DNA polymerase beta domain protein region; KEGG: bcy:Bcer98_2007 nucleotidyltransferase
YP_003244341.1	PFAM: Methyltransferase type 11; methyltransferase small; UbiE/COQ5 methyltransferase; Methyltransferase type 12; putative RNA methylase; KEGG: pjd:Pjdr2_2867 methyltransferase type 11
YP_003244342.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4887 methyl-accepting chemotaxis sensory transducer
YP_003244343.1	PFAM: Phosphoglycerate mutase; KEGG: pjd:Pjdr2_5493 protein of unknown function DUF925
YP_003244344.1	PFAM: NUDIX hydrolase; KEGG: sth:STH2460 MutT/NUDIX family protein
YP_003244345.1	PFAM: Methyltransferase type 12; KEGG: pjd:Pjdr2_3939 methyltransferase type 12
YP_003244346.1	PFAM: protein of unknown function DUF925; KEGG: pfo:Pfl01_3542 hypothetical protein
YP_003244347.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: asa:ASA_1967 ribokinase
YP_003244348.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: rrs:RoseRS_2215 ADP-ribosylation/crystallin J1
YP_003244349.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: sma:SAV_6184 hypothetical protein
YP_003244350.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1162 extracellular solute-binding protein family 1
YP_003244351.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1611 putative transport system integral membrane protein
YP_003244352.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3686 binding-protein-dependent transport systems inner membrane component
YP_003244353.1	KEGG: eum:ECUMN_0812 hypothetical protein
YP_003244354.1	KEGG: hor:Hore_15420 hypothetical protein
YP_003244355.1	PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: chy:CHY_0434 GntR family transcriptional regulator
YP_003244357.1	KEGG: bcz:BCZK2002 hypothetical protein
YP_003244358.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sth:STH1698 hypothetical protein
YP_003244359.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bca:BCE_3402 oxidoreductase, putative
YP_003244360.1	KEGG: bcq:BCQ_3662 hypothetical protein
YP_003244362.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_2439 acetyltransferase
YP_003244363.1	PFAM: protein of unknown function DUF1362; KEGG: bld:BLi03560 hypothetical protein
YP_003244364.1	PFAM: lipolytic protein G-D-S-L family; KEGG: pjd:Pjdr2_4094 lipolytic protein G-D-S-L family
YP_003244365.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bsu:BSU06950 hypothetical protein
YP_003244366.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3536 two component transcriptional regulator, AraC family
YP_003244367.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3535 extracellular solute-binding protein family 1
YP_003244368.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU06980 hypothetical protein
YP_003244369.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU06990 hypothetical protein
YP_003244370.1	PFAM: glycosyl hydrolase family 88; KEGG: bsu:BSU07000 hypothetical protein
YP_003244371.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pjd:Pjdr2_4869 peptidoglycan glycosyltransferase
YP_003244372.1	PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_2698 NUDIX hydrolase
YP_003244373.1	KEGG: eat:EAT1b_0870 hypothetical protein
YP_003244374.1	PFAM: Ion transport 2 domain protein; KEGG: esi:Exig_2746 ion transport 2 domain-containing protein
YP_003244376.1	PFAM: SNF2-related protein; zinc finger SWIM domain protein; SNF2 helicase associated domain protein ; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: bbe:BBR47_36880 hypothetical protein
YP_003244378.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_3136 GCN5-related N-acetyltransferase
YP_003244379.1	PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: bbe:BBR47_58320 hypothetical protein
YP_003244380.1	KEGG: rca:Rcas_3641 hypothetical protein
YP_003244381.1	PFAM: aminoglycoside phosphotransferase; KEGG: pjd:Pjdr2_3115 aminoglycoside phosphotransferase
YP_003244382.1	KEGG: bcl:ABC0637 hypothetical protein
YP_003244383.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bca:BCE_3431 PhzF family phenazine biosynthesis protein
YP_003244384.1	PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_1909 glycosyl transferase family 2
YP_003244385.1	KEGG: dsy:DSY0591 hypothetical protein
YP_003244386.1	KEGG: ckr:CKR_2139 hypothetical protein
YP_003244387.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ote:Oter_2769 methyltransferase type 11
YP_003244388.1	PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: pjd:Pjdr2_4051 Ig domain protein group 2 domain protein
YP_003244389.1	KEGG: pjd:Pjdr2_0713 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003244390.1	catalyzes resistance to fosfomycin by the addition of a thiol cofactor
YP_003244391.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_3580 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_003244392.1	PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_6147 NUDIX hydrolase
YP_003244393.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bha:BH3117 RNA polymerase ECF-type sigma factor
YP_003244394.1	KEGG: bha:BH3118 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP
YP_003244396.1	PFAM: aminoglycoside phosphotransferase; KEGG: ara:Arad_2177 hypothetical protein
YP_003244397.1	KEGG: ttj:TTHA0303 hypothetical protein
YP_003244398.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bcx:BCA_3196 YczJ
YP_003244399.1	PFAM: protein of unknown function DUF952; KEGG: hau:Haur_2970 hypothetical protein
YP_003244400.1	PFAM: peptidase S51 dipeptidase E; KEGG: esi:Exig_0302 peptidase S51 dipeptidase E
YP_003244402.1	KEGG: hypothetical protein
YP_003244403.1	KEGG: net:Neut_0775 homoserine kinase
YP_003244404.1	PFAM: Phosphoglycerate mutase; KEGG: kol:Kole_0617 phosphoglycerate mutase
YP_003244405.1	PFAM: NUDIX hydrolase; KEGG: bcv:Bcav_0640 NUDIX hydrolase
YP_003244406.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_1510 GCN5-related N-acetyltransferase
YP_003244407.1	TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: pjd:Pjdr2_1511 oligoendopeptidase, M3 family
YP_003244408.1	PFAM: small multidrug resistance protein; KEGG: bay:RBAM_012910 YkkD
YP_003244409.1	PFAM: small multidrug resistance protein; KEGG: bbe:BBR47_08770 probable multidrug resistance protein
YP_003244410.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bha:BH0839 transcriptional regulator
YP_003244411.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_3300 haloacid dehalogenase domain protein hydrolase type 3
YP_003244412.1	KEGG: sgr:SGR_2879 TetR family transcriptional regulator
YP_003244413.1	KEGG: cbb:CLD_3572 hypothetical protein
YP_003244415.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bbe:BBR47_48150 hypothetical protein
YP_003244416.1	PFAM: RDD domain containing protein; KEGG: pjd:Pjdr2_5867 RDD domain containing protein
YP_003244418.1	PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_5356 NUDIX hydrolase
YP_003244419.1	KEGG: phe:Phep_1694 oxidoreductase domain protein
YP_003244420.1	KEGG: chl:Chy400_3397 hypothetical protein
YP_003244421.1	KEGG: pjd:Pjdr2_3006 hypothetical protein
YP_003244422.1	KEGG: aau:AAur_2997 hypothetical protein
YP_003244423.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2252 ABC transporter related
YP_003244424.1	PFAM: beta-lactamase domain protein; KEGG: pjd:Pjdr2_4634 beta-lactamase domain protein
YP_003244425.1	KEGG: hypothetical protein
YP_003244426.1	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: pjd:Pjdr2_5056 tetratricopeptide TPR_2 repeat protein
YP_003244427.1	PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5057 transcriptional regulator, AraC family
YP_003244429.1	PFAM: glycoside hydrolase clan GH-D; KEGG: pjd:Pjdr2_5058 glycoside hydrolase clan GH-D
YP_003244430.1	PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein
YP_003244431.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_1294 putative sensor with HAMP domain
YP_003244432.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_1295 two component transcriptional regulator, AraC family
YP_003244433.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1296 binding-protein-dependent transport systems inner membrane component
YP_003244434.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1297 binding-protein-dependent transport systems inner membrane component
YP_003244435.1	PFAM: RDD domain containing protein; KEGG: pjd:Pjdr2_5285 RDD domain containing protein
YP_003244436.1	KEGG: pjd:Pjdr2_1292 alpha-L-fucosidase
YP_003244437.1	PFAM: Carbohydrate binding family 6; KEGG: pjd:Pjdr2_1293 carbohydrate binding family 6
YP_003244438.1	KEGG: hypothetical protein
YP_003244439.1	PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: pjd:Pjdr2_5604 short-chain dehydrogenase/reductase SDR
YP_003244440.1	KEGG: mpl:Mpal_1485 hypothetical protein
YP_003244441.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_4512 transcriptional regulator, LysR family
YP_003244442.1	KEGG: cce:Ccel_0564 hypothetical protein
YP_003244443.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bbe:BBR47_08280 hypothetical protein
YP_003244445.1	PFAM: alpha/beta hydrolase fold; KEGG: cbe:Cbei_3626 hypothetical protein
YP_003244446.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bce:BC2643 HAD superfamily hydrolase
YP_003244447.1	PFAM: NUDIX hydrolase; KEGG: btl:BALH_2480 MutT/NUDIX family protein
YP_003244448.1	KEGG: pjd:Pjdr2_6085 metal-dependent hydrolase
YP_003244450.1	PFAM: NUDIX hydrolase; KEGG: bld:BLi02240 hypothetical protein
YP_003244452.1	KEGG: kpu:KP1_3875 3-demethylubiquinone-9 3-methyltransferase
YP_003244453.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: oih:OB0459 hypothetical protein
YP_003244454.1	PFAM: Acetamidase/Formamidase; copper amine oxidase domain protein; KEGG: abc:ACICU_03577 acetamidase/formamidase
YP_003244455.1	KEGG: pjd:Pjdr2_2461 hypothetical protein
YP_003244456.1	PFAM: Methyltransferase type 11; KEGG: bbe:BBR47_09520 hypothetical protein
YP_003244457.1	KEGG: bbe:BBR47_15000 hypothetical protein
YP_003244458.1	PFAM: GCN5-related N-acetyltransferase; KEGG: lsp:Bsph_0659 spermine/spermidine acetyltransferase, putative
YP_003244459.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_2701 GCN5-related N-acetyltransferase
YP_003244460.1	KEGG: bbe:BBR47_14350 hypothetical protein
YP_003244461.1	KEGG: pjd:Pjdr2_4965 hypothetical protein
YP_003244462.1	KEGG: pjd:Pjdr2_4966 hypothetical protein
YP_003244463.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4967 histidine kinase
YP_003244464.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pjd:Pjdr2_4968 two component transcriptional regulator, winged helix family
YP_003244465.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_3719 ABC transporter related
YP_003244466.1	PFAM: ABC-2 type transporter; KEGG: amt:Amet_3718 ABC-2 type transporter
YP_003244467.1	PFAM: ABC-2 type transporter; KEGG: amt:Amet_3717 ABC-2 type transporter
YP_003244468.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: amt:Amet_3716 integral membrane sensor signal transduction histidine kinase
YP_003244469.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: amt:Amet_3715 two component LuxR family transcriptional regulator
YP_003244470.1	PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: bwe:BcerKBAB4_2012 methyltransferase type 12
YP_003244471.1	PFAM: protein of unknown function UPF0157; KEGG: bca:BCE_2673 hypothetical protein
YP_003244472.1	PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_3938 NUDIX hydrolase
YP_003244473.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bte:BTH_I3172 3-demethylubiquinone-9 3-methyltransferase
YP_003244474.1	PFAM: Domain of unknown function DUF1801; KEGG: mxa:MXAN_1652 hypothetical protein
YP_003244475.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mxa:MXAN_7068 hypothetical protein
YP_003244476.1	PFAM: protein of unknown function DUF34; KEGG: bwe:BcerKBAB4_3112 hypothetical protein
YP_003244477.1	KEGG: amt:Amet_1871 hypothetical protein
YP_003244479.1	PFAM: NUDIX hydrolase; KEGG: cac:CAC0084 MutT/NUDIX family hydrolase
YP_003244480.1	PFAM: NUDIX hydrolase; KEGG: bca:BCE_1888 MutT/NUDIX family protein
YP_003244481.1	KEGG: lsp:Bsph_2552 hypothetical protein
YP_003244483.1	KEGG: hypothetical protein
YP_003244484.1	KEGG: gwc:GWCH70_3059 hypothetical protein
YP_003244485.1	KEGG: pjd:Pjdr2_0618 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_003244486.1	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: pjd:Pjdr2_6179 hypothetical protein
YP_003244487.1	PFAM: lipase class 3; KEGG: pjd:Pjdr2_1001 lipase class 3
YP_003244488.1	PFAM: LmbE family protein; KEGG: dfe:Dfer_1152 LmbE family protein
YP_003244489.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bwe:BcerKBAB4_2780 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003244491.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_09430 hypothetical protein
YP_003244492.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_5384 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_003244493.1	KEGG: ava:Ava_1897 hypothetical protein
YP_003244494.1	PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: bcg:BCG9842_B2422 methyltransferase
YP_003244495.1	PFAM: DinB family protein; KEGG: pjd:Pjdr2_5345 DinB family protein
YP_003244496.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_1254 binding-protein-dependent transport systems inner membrane component
YP_003244497.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_1253 binding-protein-dependent transport systems inner membrane component
YP_003244498.1	PFAM: extracellular solute-binding protein family 1; KEGG: cce:Ccel_1252 extracellular solute-binding protein family 1
YP_003244499.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: cce:Ccel_1251 two component transcriptional regulator, AraC family
YP_003244500.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: cce:Ccel_1250 signal transduction histidine kinase, LytS
YP_003244501.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: bfs:BF0766 putative beta-glucosidase
YP_003244502.1	KEGG: pjd:Pjdr2_5577 hypothetical protein
YP_003244503.1	PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: pjd:Pjdr2_6154 alpha-L-fucosidase
YP_003244504.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5271 extracellular solute-binding protein family 1
YP_003244505.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: csc:Csac_2727 helix-turn-helix domain-containing protein
YP_003244506.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1994 binding-protein-dependent transport systems inner membrane component
YP_003244507.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2724 binding-protein-dependent transport systems inner membrane component
YP_003244508.1	PFAM: NUDIX hydrolase; KEGG: aci:ACIAD0720 putative MutT/NUDIX family protein
YP_003244509.1	KEGG: cpi:Cpin_5118 hypothetical protein
YP_003244510.1	KEGG: lsp:Bsph_3255 hypothetical protein
YP_003244511.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1485 transcriptional regulator, AraC family
YP_003244512.1	PFAM: glycosidase PH1107-related; KEGG: pjd:Pjdr2_5077 glycosidase PH1107-related
YP_003244513.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1484 extracellular solute-binding protein family 1
YP_003244514.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1483 binding-protein-dependent transport systems inner membrane component
YP_003244515.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1482 binding-protein-dependent transport systems inner membrane component
YP_003244516.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pjd:Pjdr2_4869 peptidoglycan glycosyltransferase
YP_003244517.1	KEGG: bcg:BCG9842_B1618 hypothetical protein
YP_003244518.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5050 transcriptional regulator, AraC family
YP_003244519.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ter:Tery_4634 GCN5-related N-acetyltransferase
YP_003244520.1	PFAM: protein of unknown function DUF265; NUDIX hydrolase; SMART: AAA ATPase; KEGG: bce:BC0540 mutator MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
YP_003244521.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcz:pE33L466_0064 ABC transporter, ATP-binding protein
YP_003244522.1	PFAM: protein of unknown function DUF214; KEGG: bcz:pE33L466_0065 ABC transporter permease
YP_003244523.1	PFAM: regulatory protein TetR; KEGG: bcz:pE33L466_0067 TetR family transcriptional regulator
YP_003244525.1	PFAM: GCN5-related N-acetyltransferase; KEGG: det:DET0144 acetyltransferase
YP_003244526.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcl:ABC3642 two-component sensor histidine kinase
YP_003244527.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcl:ABC3641 two-component response regulator
YP_003244528.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcl:ABC3640 bacitracin ABC transporter ATP-binding protein
YP_003244529.1	KEGG: bcz:BCZK1722 hypothetical protein
YP_003244530.1	KEGG: bcl:ABC1966 hypothetical protein
YP_003244532.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: oih:OB3310 oxidoreductase
YP_003244533.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: lsp:Bsph_3349 bacilysin biosynthesis oxidoreductase BacC
YP_003244534.1	PFAM: regulatory protein TetR; KEGG: lsp:Bsph_3348 hypothetical protein
YP_003244535.1	PFAM: Fibronectin-binding family protein; KEGG: pjd:Pjdr2_0255 fibronectin-binding family protein
YP_003244536.1	PFAM: transcription activator effector binding; KEGG: bha:BH3633 hypothetical protein
YP_003244538.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cpy:Cphy_3204 GCN5-related N-acetyltransferase
YP_003244539.1	KEGG: bay:RBAM_005630 YkkA
YP_003244540.1	PFAM: NUDIX hydrolase; KEGG: bcu:BCAH820_4020 ADP-ribose pyrophosphatase
YP_003244541.1	TIGRFAM: histidinol-phosphate phosphatase family protein; HAD-superfamily hydrolase, subfamily IA, variant 1; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: pjd:Pjdr2_4049 histidinol-phosphate phosphatase family protein
YP_003244543.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH0699 ribosomal-protein-alanine N-acetyltransferase
YP_003244544.1	PFAM: Penicillinase repressor; KEGG: bca:BCE_1849 hypothetical protein
YP_003244545.1	PFAM: peptidase M56 BlaR1; peptidase M48 Ste24p; KEGG: bcq:BCQ_1788 Zn-dependent protease with chaperone function
YP_003244546.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_003244547.1	PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: rci:RRC497 alanyl-tRNA synthetase-related protein
YP_003244548.1	PFAM: acylphosphatase; KEGG: ooe:OEOE_0168 acylphosphatase
YP_003244549.1	PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein
YP_003244551.1	KEGG: cac:CAC0026 hypothetical protein
YP_003244552.1	KEGG: pjd:Pjdr2_1633 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase; CBS domain containing protein
YP_003244553.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1634 binding-protein-dependent transport systems inner membrane component
YP_003244554.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pjd:Pjdr2_1635 substrate-binding region of ABC-type glycine betaine transport system
YP_003244555.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1636 binding-protein-dependent transport systems inner membrane component
YP_003244556.1	KEGG: lsp:Bsph_4559 ATP-binding protein (P-loop)
YP_003244557.1	PFAM: YCII-related; KEGG: dhd:Dhaf_1746 YCII-related
YP_003244558.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3655 extracellular solute-binding protein family 1
YP_003244559.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3654 binding-protein-dependent transport systems inner membrane component
YP_003244560.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3653 binding-protein-dependent transport systems inner membrane component
YP_003244561.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3656 transcriptional regulator, AraC family
YP_003244562.1	KEGG: bwe:BcerKBAB4_2435 hypothetical protein
YP_003244563.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tex:Teth514_0897 cobalt transporter ATP-binding subunit
YP_003244564.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_02510 ABC transporter ATP-binding protein
YP_003244565.1	PFAM: cobalt transport protein; KEGG: cdf:CD0102 ABC transporter, permease protein
YP_003244566.1	KEGG: bwe:BcerKBAB4_2436 hypothetical protein
YP_003244567.1	PFAM: aminoglycoside phosphotransferase; KEGG: pjd:Pjdr2_1785 aminoglycoside phosphotransferase
YP_003244568.1	KEGG: btk:BT9727_2303 hypothetical protein
YP_003244569.1	KEGG: lsp:Bsph_2983 ankyrin repeat-containing protein
YP_003244572.1	PFAM: glycoside hydrolase family 4; KEGG: ate:Athe_1104 glycoside hydrolase family 4
YP_003244573.1	PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: npu:Npun_F3579 AraC family transcriptional regulator
YP_003244574.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_3249 oxidoreductase domain protein
YP_003244575.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_3248 oxidoreductase domain protein
YP_003244576.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: bcg:BCG9842_B3404 protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin, putative
YP_003244577.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_5350 extracellular solute-binding protein family 1
YP_003244578.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5351 binding-protein-dependent transport systems inner membrane component
YP_003244579.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5352 binding-protein-dependent transport systems inner membrane component
YP_003244580.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: hypothetical protein
YP_003244581.1	TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; KEGG: pjd:Pjdr2_3990 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
YP_003244582.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; KEGG: pjd:Pjdr2_3991 SNF2-related protein
YP_003244583.1	KEGG: pjd:Pjdr2_3992 hypothetical protein
YP_003244584.1	KEGG: pjd:Pjdr2_3993 hypothetical protein
YP_003244585.1	KEGG: pjd:Pjdr2_3994 hypothetical protein
YP_003244586.1	PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: pjd:Pjdr2_3995 cell wall hydrolase/autolysin
YP_003244587.1	PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_5813 methyl-accepting chemotaxis sensory transducer
YP_003244588.1	PFAM: protein of unknown function DUF610 YibQ; KEGG: pjd:Pjdr2_3996 protein of unknown function DUF610 YibQ
YP_003244589.1	KEGG: pjd:Pjdr2_2075 hypothetical protein
YP_003244590.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bwe:BcerKBAB4_2632 alkylhydroperoxidase
YP_003244591.1	KEGG: pjd:Pjdr2_3997 hypothetical protein
YP_003244592.1	KEGG: pjd:Pjdr2_3998 hypothetical protein
YP_003244593.1	TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: pjd:Pjdr2_3999 xanthine phosphoribosyltransferase
YP_003244594.1	KEGG: pjd:Pjdr2_4001 hypothetical protein
YP_003244595.1	PFAM: metallophosphoesterase; KEGG: pjd:Pjdr2_4003 metallophosphoesterase
YP_003244596.1	PFAM: glycosyl transferase group 1; KEGG: pjd:Pjdr2_4004 glycosyl transferase group 1
YP_003244597.1	KEGG: pjd:Pjdr2_4005 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003244598.1	PFAM: Fmu (Sun) domain protein; KEGG: pjd:Pjdr2_2165 Fmu (Sun) domain protein
YP_003244599.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bcg:BCG9842_B2986 drug resistance transporter, EmrB/QacA family
YP_003244600.1	PFAM: MbtH domain protein; KEGG: sen:SACE_4284 MbtH-like protein
YP_003244601.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: bsu:BSU31960 involved in siderophore 2,3-dihydroxybenzoate (DHB) synthesis
YP_003244602.1	PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: mxa:MXAN_3644 isochorismatase
YP_003244603.1	TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: bcy:Bcer98_1756 2,3-dihydroxybenzoate-AMP ligase
YP_003244604.1	TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: bld:BLi03901 isochorismate synthase DhbC
YP_003244605.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: scl:sce3883 2,3-dihydroxybenzoate-2,3-dehydrogenase
YP_003244606.1	PFAM: putative esterase; KEGG: bsu:BSU32010 hypothetical protein
YP_003244607.1	PFAM: periplasmic binding protein; KEGG: lsp:Bsph_0700 ferrichrome ABC transporter ferrichrome-binding protein
YP_003244608.1	PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bbe:BBR47_22190 probable transcriptional regulator
YP_003244609.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: pjd:Pjdr2_2163 Cof-like hydrolase
YP_003244610.1	PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: pjd:Pjdr2_2162 pseudouridine synthase
YP_003244611.1	PFAM: Fmu (Sun) domain protein; KEGG: pjd:Pjdr2_2161 tRNA (cytosine-5-)-methyltransferase
YP_003244612.1	PFAM: Thioredoxin domain; KEGG: bha:BH1942 hypothetical protein
YP_003244613.1	KEGG: gwc:GWCH70_0542 hypothetical protein
YP_003244614.1	PFAM: protein of unknown function DUF309; KEGG: pjd:Pjdr2_2594 protein of unknown function DUF309
YP_003244615.1	PFAM: RelA/SpoT domain protein; KEGG: pjd:Pjdr2_2152 RelA/SpoT domain protein
YP_003244616.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_003244618.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ckr:CKR_1939 hypothetical protein
YP_003244619.1	KEGG: pjd:Pjdr2_2149 ferredoxin (4Fe-4S)
YP_003244620.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: pjd:Pjdr2_2148 DNA-directed DNA polymerase
YP_003244621.1	TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; KEGG: pjd:Pjdr2_2147 2-isopropylmalate synthase/homocitrate synthase family protein
YP_003244622.1	PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; KEGG: pjd:Pjdr2_2146 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003244623.1	PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; KEGG: pjd:Pjdr2_2144 hypothetical protein
YP_003244624.1	KEGG: pjd:Pjdr2_2143 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_003244625.1	PFAM: protein of unknown function DUF294 nucleotidyltransferase putative; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; KEGG: pjd:Pjdr2_2142 protein of unknown function DUF294 nucleotidyltransferase putative
YP_003244626.1	TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: bbe:BBR47_09050 ammonium transporter
YP_003244627.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pjd:Pjdr2_2140 transcriptional regulator, MerR family
YP_003244628.1	PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: pjd:Pjdr2_2139 peptidase membrane zinc metallopeptidase putative
YP_003244629.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_2138 transcriptional regulator, LysR family
YP_003244630.1	PFAM: Rhomboid family protein; KEGG: pjd:Pjdr2_2137 rhomboid family protein
YP_003244631.1	PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: pjd:Pjdr2_2136 redoxin domain protein
YP_003244632.1	KEGG: pjd:Pjdr2_2135 hypothetical protein
YP_003244633.1	PFAM: protein of unknown function DUF624; KEGG: pjd:Pjdr2_2134 protein of unknown function DUF624
YP_003244635.1	PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: pjd:Pjdr2_2133 DEAD/DEAH box helicase domain protein
YP_003244636.1	PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: pjd:Pjdr2_2132 protein of unknown function DUF161
YP_003244637.1	KEGG: pjd:Pjdr2_2131 hypothetical protein
YP_003244638.1	KEGG: pjd:Pjdr2_2130 GTP-binding protein
YP_003244639.1	NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones
YP_003244640.1	KEGG: pjd:Pjdr2_2123 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase
YP_003244641.1	PFAM: Protein of unknown function DUF2600; KEGG: pjd:Pjdr2_2122 putative cytoplasmic protein
YP_003244642.1	PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: pjd:Pjdr2_2120 major facilitator superfamily MFS_1
YP_003244643.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bbe:BBR47_09490 cold shock protein
YP_003244644.1	KEGG: pjd:Pjdr2_2117 hypothetical protein
YP_003244645.1	KEGG: pjd:Pjdr2_2116 hypothetical protein
YP_003244646.1	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: pjd:Pjdr2_2115 oligoendopeptidase F
YP_003244647.1	KEGG: bld:BLi02890 YrvD
YP_003244648.1	PFAM: peptidase M42 family protein; KEGG: pjd:Pjdr2_2727 peptidase M42 family protein
YP_003244649.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_0766 ABC transporter related
YP_003244650.1	PFAM: protein of unknown function DUF92 transmembrane; KEGG: bbe:BBR47_15720 hypothetical membrane protein
YP_003244651.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbe:BBR47_25780 hypothetical protein
YP_003244652.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pjd:Pjdr2_2109 glycerophosphoryl diester phosphodiesterase
YP_003244653.1	PFAM: Capsule synthesis protein, CapA; KEGG: bbe:BBR47_37540 hypothetical protein
YP_003244654.1	KEGG: pjd:Pjdr2_2106 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase
YP_003244655.1	KEGG: pjd:Pjdr2_2105 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D)
YP_003244656.1	PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH2592 hypothetical protein
YP_003244657.1	PFAM: O-methyltransferase family 3; KEGG: pjd:Pjdr2_2093 O-methyltransferase family 3
YP_003244658.1	PFAM: putative RNA methylase; KEGG: pjd:Pjdr2_2092 putative RNA methylase
YP_003244659.1	PFAM: sulfatase; KEGG: pjd:Pjdr2_2091 sulfatase
YP_003244661.1	KEGG: bpu:BPUM_3395 hypothetical protein
YP_003244662.1	PFAM: HesB/YadR/YfhF-family protein; KEGG: pjd:Pjdr2_2089 HesB/YadR/YfhF-family protein
YP_003244663.1	KEGG: pjd:Pjdr2_2088 hypothetical protein
YP_003244664.1	PFAM: peptidase M14 carboxypeptidase A; Peptidoglycan-binding lysin domain; SMART: peptidase M14 carboxypeptidase A; Peptidoglycan-binding LysM; KEGG: sth:STH1567 gamma-D-glutamyl-L-diamino acid endopeptidase I
YP_003244665.1	KEGG: pjd:Pjdr2_2084 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_003244666.1	PFAM: Nitric oxide synthase NOS; KEGG: gka:GK1676 nitric oxide synthase
YP_003244667.1	KEGG: pjd:Pjdr2_2083 general stress protein
YP_003244668.1	KEGG: pjd:Pjdr2_2082 hypothetical protein
YP_003244669.1	PFAM: protein of unknown function DUF86; KEGG: pjd:Pjdr2_2080 protein of unknown function DUF86
YP_003244670.1	PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: pjd:Pjdr2_2078 stress responsive alpha-beta barrel domain protein
YP_003244671.1	KEGG: bbe:BBR47_55780 hypothetical protein
YP_003244672.1	SMART: helix-turn-helix domain protein; KEGG: bpu:BPUM_3036 transcriptional regulator
YP_003244674.1	KEGG: pjd:Pjdr2_0249 hypothetical protein
YP_003244675.1	PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_2543 spore germination protein-like protein
YP_003244676.1	PFAM: YhhN family protein; KEGG: oih:OB3143 hypothetical protein
YP_003244677.1	PFAM: MgtC/SapB transporter; KEGG: pjd:Pjdr2_1092 MgtC/SapB transporter
YP_003244678.1	PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: hor:Hore_08130 glycerol-3-phosphate responsive antiterminator
YP_003244679.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sth:STH786 hypothetical protein
YP_003244680.1	PFAM: FAD dependent oxidoreductase; KEGG: aac:Aaci_0056 FAD dependent oxidoreductase
YP_003244681.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cbe:Cbei_0678 AraC family transcriptional regulator
YP_003244682.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_0341 oxidoreductase domain protein
YP_003244683.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_5267 xylose isomerase domain protein TIM barrel
YP_003244684.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_0342 xylose isomerase domain protein TIM barrel
YP_003244685.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_5564 oxidoreductase domain protein
YP_003244686.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pjd:Pjdr2_5565 xylose isomerase domain protein TIM barrel
YP_003244687.1	PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3016 transcriptional regulator, AraC family
YP_003244688.1	PFAM: aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; KEGG: pjd:Pjdr2_5374 aminotransferase class I and II
YP_003244689.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_003244690.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_5376 transcriptional regulator, GntR family with aminotransferase domain
YP_003244691.1	KEGG: spe:Spro_2570 hypothetical protein
YP_003244692.1	PFAM: coagulation factor 5/8 type domain protein; KEGG: pjd:Pjdr2_1772 coagulation factor 5/8 type domain protein
YP_003244693.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3163 extracellular solute-binding protein family 1
YP_003244694.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3162 binding-protein-dependent transport systems inner membrane component
YP_003244695.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3161 binding-protein-dependent transport systems inner membrane component
YP_003244696.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5257 transcriptional regulator, AraC family
YP_003244697.1	KEGG: bbe:BBR47_41990 hypothetical protein
YP_003244698.1	PFAM: regulatory protein TetR; KEGG: bbe:BBR47_42000 putative transcriptional regulator
YP_003244699.1	PFAM: glycosyl hydrolase family 88; KEGG: efa:EF2235 glucuronyl hydrolase, putative
YP_003244700.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_3656 transcriptional regulator, AraC family
YP_003244701.1	PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: sus:Acid_2655 alpha-L-fucosidase
YP_003244702.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3653 binding-protein-dependent transport systems inner membrane component
YP_003244703.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3654 binding-protein-dependent transport systems inner membrane component
YP_003244704.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3655 extracellular solute-binding protein family 1
YP_003244705.1	KEGG: hypothetical LOC555689
YP_003244706.1	PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bbe:BBR47_28460 putative DNA-binding protein
YP_003244707.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: bcy:Bcer98_0534 NAD-dependent epimerase/dehydratase
YP_003244708.1	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine
YP_003244709.1	KEGG: bca:BCE_5203 hypothetical protein
YP_003244710.1	PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_6155 transcriptional regulator, AraC family
YP_003244711.1	PFAM: regulatory protein LysR; KEGG: pjd:Pjdr2_2827 transcriptional regulator, MarR family
YP_003244712.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: scl:sce1309 hypothetical protein
YP_003244713.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: btl:BALH_1731 multidrug resistance ABC transporter, ATP-binding and permease component
YP_003244714.1	KEGG: bha:BH0714 excinuclease ABC (subunit A); TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003244715.1	PFAM: protein of unknown function DUF1470; KEGG: rso:RS05465 hypothetical protein
YP_003244716.1	PFAM: alpha/beta hydrolase fold; KEGG: ank:AnaeK_0582 alpha/beta hydrolase fold
YP_003244717.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bbe:BBR47_27350 probable transcriptional regulator
YP_003244718.1	KEGG: cce:Ccel_1396 hypothetical protein
YP_003244719.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: fra:Francci3_4105 zinc-binding alcohol dehydrogenase
YP_003244720.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbe:BBR47_10130 transcriptional regulator
YP_003244721.1	PFAM: regulatory protein TetR; KEGG: gsu:GSU2741 TetR family transcriptional regulator
YP_003244722.1	KEGG: bbe:BBR47_13270 hypothetical protein
YP_003244723.1	KEGG: pjd:Pjdr2_1982 bicupin, oxalate decarboxylase family; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein
YP_003244724.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gwc:GWCH70_2639 transcriptional regulator, MarR family
YP_003244725.1	PFAM: MMPL domain protein; KEGG: gwc:GWCH70_2638 MmpL domain protein
YP_003244726.1	PFAM: O-methyltransferase family 3; protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: pjd:Pjdr2_5198 O-methyltransferase family 3
YP_003244727.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_5199 transcriptional regulator, LysR family
YP_003244728.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4106 binding-protein-dependent transport systems inner membrane component
YP_003244729.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4107 binding-protein-dependent transport systems inner membrane component
YP_003244730.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4108 extracellular solute-binding protein family 1
YP_003244731.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4110 transcriptional regulator, AraC family
YP_003244733.1	PFAM: helix-turn-helix HxlR type; KEGG: pjd:Pjdr2_1806 transcriptional regulator, HxlR family
YP_003244734.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_1807 major facilitator superfamily MFS_1
YP_003244735.1	PFAM: Cupin domain protein; KEGG: bbe:BBR47_19670 hypothetical protein
YP_003244736.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pjd:Pjdr2_4715 peptidase M20
YP_003244737.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: esi:Exig_2206 alcohol dehydrogenase
YP_003244738.1	KEGG: bha:BH0849 hypothetical protein
YP_003244739.1	PFAM: aminoglycoside phosphotransferase; KEGG: mba:Mbar_A1987 hypothetical protein
YP_003244740.1	PFAM: DinB family protein; KEGG: bwe:BcerKBAB4_4358 DinB family protein
YP_003244741.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: bbe:BBR47_03390 hypothetical protein
YP_003244742.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: lwe:lwe1069 monooxygenase family protein
YP_003244743.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_6155 transcriptional regulator, AraC family
YP_003244744.1	PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: pjd:Pjdr2_6154 alpha-L-fucosidase
YP_003244745.1	KEGG: pjd:Pjdr2_1822 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003244746.1	PFAM: ABC-2 type transporter; KEGG: pjd:Pjdr2_1821 ABC-2 type transporter
YP_003244747.1	PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: pjd:Pjdr2_1820 transcriptional regulator, TetR family
YP_003244748.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3955 binding-protein-dependent transport systems inner membrane component
YP_003244749.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3956 binding-protein-dependent transport systems inner membrane component
YP_003244750.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3957 extracellular solute-binding protein family 1
YP_003244751.1	PFAM: Protein of unknown function DUF2266, transmembrane; KEGG: gvi:gll1194 hypothetical protein
YP_003244752.1	KEGG: aac:Aaci_2838 hypothetical protein
YP_003244753.1	PFAM: Amidohydrolase 3; KEGG: bbe:BBR47_15630 hypothetical protein
YP_003244754.1	SMART: Ankyrin; KEGG: bcb:BCB4264_A4783 ankyrin repeat domain protein
YP_003244755.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcz:BCZK4600 LysR family transcriptional regulator
YP_003244756.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_3962 ABC transporter related
YP_003244757.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_3963 ABC transporter related
YP_003244758.1	KEGG: dsy:DSY2814 hypothetical protein
YP_003244759.1	PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_1236 ABC-2 type transporter
YP_003244760.1	KEGG: rha:RHA1_ro06841 ABC daunorubicin resistance transporter, ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003244761.1	PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; KEGG: sen:SACE_3083 NmrA family protein
YP_003244762.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: pjd:Pjdr2_6219 helix-turn-helix type 11 domain protein
YP_003244763.1	KEGG: pjd:Pjdr2_1901 beta-lactamase
YP_003244764.1	PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: pjd:Pjdr2_1900 transcriptional regulator, AsnC family
YP_003244765.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pjd:Pjdr2_5277 oxidoreductase domain protein
YP_003244766.1	PFAM: extracellular solute-binding protein family 1; KEGG: lsp:Bsph_1252 lipoprotein LplA precursor
YP_003244767.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1251 protein LplC
YP_003244768.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1250 protein LplB
YP_003244769.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pjd:Pjdr2_5567 transcriptional regulator, LacI family
YP_003244770.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_02960 putative transporter
YP_003244771.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bbe:BBR47_02950 probable transcriptional regulator
YP_003244772.1	KEGG: cma:Cmaq_1622 hypothetical protein
YP_003244773.1	PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein
YP_003244774.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cpy:Cphy_3171 2-isopropylmalate synthase
YP_003244775.1	catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
YP_003244776.1	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: bsu:BSU39970 hypothetical protein
YP_003244777.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cbl:CLK_1382 DNA-binding response regulator
YP_003244778.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: cbh:CLC_1870 sensor histidine kinase
YP_003244779.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pjd:Pjdr2_4719 metal dependent phosphohydrolase
YP_003244780.1	PFAM: aldo/keto reductase; KEGG: bbe:BBR47_21370 hypothetical protein
YP_003244781.1	KEGG: bld:BLi01426 YkoK2; TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein
YP_003244782.1	PFAM: protein of unknown function DUF1349; KEGG: tfu:Tfu_2174 hypothetical protein
YP_003244783.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: pjd:Pjdr2_6189 NAD-dependent epimerase/dehydratase
YP_003244784.1	PFAM: helix-turn-helix HxlR type; KEGG: pjd:Pjdr2_6190 transcriptional regulator, HxlR family
YP_003244785.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_0546 transcriptional regulator, GntR family with aminotransferase domain
YP_003244786.1	PFAM: glycoside hydrolase family 43; KEGG: pjd:Pjdr2_1907 xylan 1,4-beta-xylosidase
YP_003244787.1	PFAM: protein of unknown function DUF1648; KEGG: cbe:Cbei_3535 hypothetical protein
YP_003244788.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: cbe:Cbei_3536 regulatory protein, ArsR
YP_003244789.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cby:CLM_1982 acetyltransferase, GNAT family
YP_003244790.1	PFAM: regulatory protein TetR; KEGG: bbe:BBR47_03000 probable transcriptional regulator
YP_003244791.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_03010 hypothetical protein
YP_003244792.1	PFAM: regulator of chromosome condensation RCC1; KEGG: ate:Athe_0956 regulator of chromosome condensation RCC1
YP_003244793.1	KEGG: pjd:Pjdr2_5551 hypothetical protein
YP_003244794.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: pjd:Pjdr2_1960 NAD-dependent epimerase/dehydratase
YP_003244796.1	KEGG: pjd:Pjdr2_1782 hypothetical protein
YP_003244797.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pjd:Pjdr2_4640 activator of HSP90 ATPase 1 family protein
YP_003244798.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: bbe:BBR47_03390 hypothetical protein
YP_003244799.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbe:BBR47_14480 putative oxidoreductase
YP_003244800.1	PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; AAA ATPase; Tetratricopeptide repeat; KEGG: bbe:BBR47_14470 probable transcriptional regulator
YP_003244801.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: pjd:Pjdr2_3122 2-nitropropane dioxygenase NPD
YP_003244802.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_003244803.1	PFAM: ABC-2 type transporter; KEGG: pjd:Pjdr2_1798 ABC-2 type transporter
YP_003244804.1	KEGG: pjd:Pjdr2_1797 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003244805.1	PFAM: S-layer domain protein; Ig domain protein; Ig domain protein group 2 domain protein; KEGG: amt:Amet_0293 S-layer domain-containing protein
YP_003244806.1	PFAM: GLUG domain protein; KEGG: swo:Swol_1078 Ig-like domain-containing protein
YP_003244807.1	PFAM: regulatory protein ArsR; KEGG: pjd:Pjdr2_5018 ArsR family transcriptional regulator
YP_003244808.1	PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; KEGG: pjd:Pjdr2_1724 alpha-N-arabinofuranosidase
YP_003244809.1	PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: pjd:Pjdr2_1779 beta-galactosidase
YP_003244810.1	PFAM: Aldose 1-epimerase; KEGG: pjd:Pjdr2_5027 aldose 1-epimerase
YP_003244811.1	PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: pjd:Pjdr2_4065 glycoside hydrolase family 2 sugar binding
YP_003244812.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1778 binding-protein-dependent transport systems inner membrane component
YP_003244813.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1777 binding-protein-dependent transport systems inner membrane component
YP_003244814.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1776 extracellular solute-binding protein family 1
YP_003244815.1	PFAM: glycoside hydrolase family 43; KEGG: pjd:Pjdr2_1775 alpha-N-arabinofuranosidase
YP_003244816.1	PFAM: protein of unknown function DUF323; KEGG: bbe:BBR47_14310 hypothetical protein
YP_003244817.1	KEGG: bbe:BBR47_14300 hypothetical protein
YP_003244818.1	PFAM: regulatory protein TetR; KEGG: bbe:BBR47_14290 putative transcriptional regulator
YP_003244819.1	PFAM: legume lectin beta domain; S-layer domain protein; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; Ig domain protein group 1 domain protein; KEGG: pjd:Pjdr2_0698 outer membrane adhesin like proteiin
YP_003244820.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: chy:CHY_0092 DNA-binding response regulator
YP_003244821.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_2127 histidine kinase
YP_003244822.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpy:Cphy_1026 ABC transporter related
YP_003244823.1	PFAM: protein of unknown function DUF214; KEGG: aoe:Clos_0754 hypothetical protein
YP_003244824.1	KEGG: oih:OB2787 hypothetical protein
YP_003244825.1	KEGG: oih:OB2788 hypothetical protein
YP_003244826.1	PFAM: peptidase M20; KEGG: oih:OB2789 hypothetical protein
YP_003244827.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: esi:Exig_0144 short chain dehydrogenase
YP_003244828.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_6243 binding-protein-dependent transport systems inner membrane component
YP_003244829.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_6242 binding-protein-dependent transport systems inner membrane component
YP_003244830.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_6241 extracellular solute-binding protein family 1
YP_003244831.1	PFAM: histidine kinase internal region; KEGG: pjd:Pjdr2_6240 histidine kinase internal region
YP_003244832.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_6239 two component transcriptional regulator, AraC family
YP_003244833.1	KEGG: pjd:Pjdr2_6238 extracellular solute-binding protein family 1
YP_003244834.1	PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: bld:BLi03161 hypothetical protein
YP_003244836.1	PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: pjd:Pjdr2_4696 beta-galactosidase
YP_003244837.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4697 binding-protein-dependent transport systems inner membrane component
YP_003244838.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4698 binding-protein-dependent transport systems inner membrane component
YP_003244839.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4699 extracellular solute-binding protein family 1
YP_003244840.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4700 putative sensor with HAMP domain
YP_003244841.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_4701 two component transcriptional regulator, AraC family
YP_003244842.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pjd:Pjdr2_3572 alcohol dehydrogenase GroES domain protein
YP_003244843.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_3573 aldo/keto reductase
YP_003244844.1	PFAM: amidohydrolase 2; KEGG: pjd:Pjdr2_3214 amidohydrolase 2
YP_003244845.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: bcl:ABC0437 hypothetical protein
YP_003244846.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rer:RER_57940 MarR family transcriptional regulator
YP_003244847.1	PFAM: NmrA family protein; TrkA-N domain protein; KEGG: bbe:BBR47_08230 hypothetical protein
YP_003244848.1	PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: ckr:CKR_2557 hypothetical protein
YP_003244849.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pjd:Pjdr2_3577 inosine/uridine-preferring nucleoside hydrolase
YP_003244850.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bld:BLi04070 galactonate dehydratase
YP_003244851.1	TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: bld:BLi04071 hypothetical protein
YP_003244852.1	PFAM: alpha-L-arabinofuranosidase B; Ricin B lectin; glycosyl hydrolase BNR repeat-containing protein; SMART: Ricin B lectin; KEGG: sco:SCO1061 bifunctional protein (secreted sugar binding protein/sugar hydrolase)
YP_003244853.1	PFAM: glycoside hydrolase family 43; KEGG: pjd:Pjdr2_1775 alpha-N-arabinofuranosidase
YP_003244854.1	PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1774 transcriptional regulator, AraC family
YP_003244855.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: tte:TTE2334 phosphoenolpyruvate-protein kinase
YP_003244856.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: tte:TTE1820 phosphotransferase system, HPr-related proteins
YP_003244857.1	KEGG: bha:BH0227 hypothetical protein
YP_003244858.1	PFAM: Creatininase; KEGG: bha:BH0226 creatinine amidohydrolase
YP_003244859.1	PFAM: aryldialkylphosphatase; KEGG: gwc:GWCH70_1411 aryldialkylphosphatase
YP_003244860.1	membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr
YP_003244861.1	PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: gwc:GWCH70_1409 phosphotransferase system lactose/cellobiose-specific IIB subunit
YP_003244862.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bha:BH0221 hypothetical protein
YP_003244863.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PRD domain protein; KEGG: bha:BH0220 hypothetical protein
YP_003244864.1	KEGG: bwe:BcerKBAB4_3137 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_003244865.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bwe:BcerKBAB4_3138 two component transcriptional regulator
YP_003244866.1	PFAM: glycoside hydrolase family 43; KEGG: hut:Huta_1400 glycoside hydrolase family 43
YP_003244867.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3631 binding-protein-dependent transport systems inner membrane component
YP_003244868.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3632 binding-protein-dependent transport systems inner membrane component
YP_003244869.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_3633 extracellular solute-binding protein family 1
YP_003244870.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_3634 two component transcriptional regulator, AraC family
YP_003244871.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_3635 putative sensor with HAMP domain
YP_003244872.1	PFAM: glycosyl hydrolase family 88; KEGG: pjd:Pjdr2_1752 glycosyl hydrolase family 88
YP_003244873.1	KEGG: pjd:Pjdr2_1751 ABC-type sugar transport system periplasmic component-like protein
YP_003244874.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1750 binding-protein-dependent transport systems inner membrane component
YP_003244875.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1749 binding-protein-dependent transport systems inner membrane component
YP_003244876.1	PFAM: helix-turn-helix- domain containing protein AraC type; histidine kinase HAMP region domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1748 transcriptional regulator, AraC family
YP_003244877.1	KEGG: cac:CAC0537 acetylxylan esterase
YP_003244878.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_4202 transcriptional regulator, GntR family with LacI sensor
YP_003244879.1	PFAM: lipolytic protein G-D-S-L family; KEGG: scl:sce5722 endo-1,4-beta-glucanase
YP_003244880.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1996 extracellular solute-binding protein family 1
YP_003244881.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1171 binding-protein-dependent transport systems inner membrane component
YP_003244882.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1170 binding-protein-dependent transport systems inner membrane component
YP_003244883.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: csc:Csac_2727 helix-turn-helix domain-containing protein
YP_003244884.1	KEGG: pjd:Pjdr2_4191 coagulation factor 5/8 type domain protein
YP_003244885.1	KEGG: pjd:Pjdr2_4198 lipolytic protein G-D-S-L family
YP_003244886.1	PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; KEGG: pjd:Pjdr2_4199 alpha-mannosidase
YP_003244887.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4193 extracellular solute-binding protein family 1
YP_003244888.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4194 binding-protein-dependent transport systems inner membrane component
YP_003244889.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4195 binding-protein-dependent transport systems inner membrane component
YP_003244890.1	PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_4196 transcriptional regulator, AraC family
YP_003244891.1	PFAM: Protein of unknown function DUF1861; KEGG: pjd:Pjdr2_4197 protein of unknown function DUF1861
YP_003244892.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_4202 transcriptional regulator, GntR family with LacI sensor
YP_003244893.1	KEGG: bcl:ABC3268 hypothetical protein
YP_003244894.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: pjd:Pjdr2_4515 germination protein, Ger(X)C family
YP_003244895.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bbe:BBR47_48950 spore germination protein
YP_003244896.1	PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_4513 GerA spore germination protein
YP_003244897.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ach:Achl_3835 binding-protein-dependent transport systems inner membrane component
YP_003244898.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: spv:SPH_2073 spermidine/putrescine ABC transporter ATP-binding subunit
YP_003244899.1	PFAM: extracellular solute-binding protein family 1; KEGG: ach:Achl_3833 extracellular solute-binding protein family 1
YP_003244900.1	KEGG: pmr:PMI2968 hypothetical protein
YP_003244901.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: gtn:GTNG_1824 transcriptional regulator
YP_003244902.1	KEGG: hypothetical protein
YP_003244903.1	PFAM: major facilitator superfamily MFS_1; KEGG: eat:EAT1b_1982 major facilitator superfamily MFS_1
YP_003244904.1	PFAM: helix-turn-helix HxlR type; KEGG: cbi:CLJ_B1630 putative transcriptional regulator
YP_003244905.1	PFAM: regulatory protein TetR; KEGG: apt:APA01_15760 transcriptional regulator TetR
YP_003244906.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pjd:Pjdr2_1638 short-chain dehydrogenase/reductase SDR
YP_003244907.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cai:Caci_0330 alcohol dehydrogenase GroES domain protein
YP_003244908.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sco:SCO2476 dehydrogenase/reductase (secreted protein)
YP_003244909.1	KEGG: btl:BALH_4078 TetR family transcriptional regulator
YP_003244910.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: pjd:Pjdr2_4086 acetolactate synthase, large subunit, biosynthetic type
YP_003244911.1	SMART: helix-turn-helix domain protein; KEGG: pjd:Pjdr2_2488 helix-turn-helix domain protein
YP_003244912.1	PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: ami:Amir_5047 short-chain dehydrogenase/reductase SDR
YP_003244913.1	SMART: helix-turn-helix domain protein; KEGG: pjd:Pjdr2_4056 hypothetical protein
YP_003244914.1	PFAM: NADPH-dependent FMN reductase; KEGG: lsp:Bsph_0153 hypothetical protein
YP_003244915.1	PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: cyh:Cyan8802_1498 stress responsive alpha-beta barrel domain protein
YP_003244916.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pjd:Pjdr2_1639 transcriptional regulator, MerR family
YP_003244917.1	KEGG: saq:Sare_3164 hypothetical protein
YP_003244918.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcl:ABC1385 transcriptional regulator
YP_003244919.1	PFAM: Endoribonuclease L-PSP; KEGG: bcl:ABC1384 translation initiation inhibitor
YP_003244920.1	PFAM: monooxygenase FAD-binding; KEGG: bcl:ABC1383 hypothetical protein
YP_003244921.1	PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bbe:BBR47_55610 putative transporter
YP_003244922.1	PFAM: Luciferase-like, subgroup; KEGG: bbe:BBR47_55620 hypothetical protein
YP_003244923.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bbe:BBR47_55630 probable transcriptional regulator
YP_003244924.1	PFAM: regulatory protein TetR; KEGG: efa:EF1326 TetR family transcriptional regulator
YP_003244925.1	PFAM: protein of unknown function DUF1486; KEGG: mei:Msip34_1260 protein of unknown function DUF1486
YP_003244926.1	KEGG: pjd:Pjdr2_6028 YhgE/Pip N-terminal domain protein
YP_003244927.1	PFAM: ATP-cone domain protein; KEGG: pjd:Pjdr2_1529 ATP-cone domain protein
YP_003244928.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: pjd:Pjdr2_2037 small acid-soluble spore protein alpha/beta type
YP_003244929.1	PFAM: Lytic transglycosylase catalytic; KEGG: pjd:Pjdr2_1527 lytic transglycosylase catalytic
YP_003244930.1	TIGRFAM: dephospho-CoA kinase; KEGG: pjd:Pjdr2_1526 dephospho-CoA kinase
YP_003244931.1	TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204; KEGG: pjd:Pjdr2_1525 sporulation protein YtaF
YP_003244932.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_003244933.1	KEGG: pjd:Pjdr2_1523 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 3'-5' exonuclease; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2
YP_003244934.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: pjd:Pjdr2_1521 phosphate uptake regulator, PhoU
YP_003244935.1	KEGG: pjd:Pjdr2_1520 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003244936.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_2395 phosphate ABC transporter permease
YP_003244937.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aoe:Clos_1117 phosphate ABC transporter, inner membrane subunit PstC
YP_003244938.1	TIGRFAM: phosphate binding protein; KEGG: aoe:Clos_1116 phosphate binding protein
YP_003244939.1	PFAM: chemotaxis sensory transducer; CBS domain containing protein; SMART: chemotaxis sensory transducer; KEGG: pjd:Pjdr2_1519 methyl-accepting chemotaxis sensory transducer
YP_003244940.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pjd:Pjdr2_1503 two component transcriptional regulator, winged helix family
YP_003244941.1	KEGG: pjd:Pjdr2_1502 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein
YP_003244942.1	PFAM: Bile acid:sodium symporter; KEGG: pjd:Pjdr2_1501 bile acid:sodium symporter
YP_003244943.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: bha:BH0894 fumarate hydratase class I (fumarase)
YP_003244945.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gwc:GWCH70_0706 short-chain dehydrogenase/reductase SDR
YP_003244946.1	KEGG: pjd:Pjdr2_4469 hypothetical protein
YP_003244947.1	KEGG: pjd:Pjdr2_4471 malate dehydrogenase, NAD-dependent; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase
YP_003244948.1	KEGG: pjd:Pjdr2_4472 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_003244949.1	KEGG: pjd:Pjdr2_4473 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase
YP_003244950.1	TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: gka:GK2738 hypothetical protein
YP_003244951.1	PFAM: FxsA cytoplasmic membrane protein; KEGG: btk:BT9727_4326 FxsA
YP_003244952.1	PFAM: thioesterase superfamily protein; KEGG: pjd:Pjdr2_4476 thioesterase superfamily protein
YP_003244953.1	KEGG: pjd:Pjdr2_4477 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_003244954.1	KEGG: pjd:Pjdr2_4478 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region
YP_003244955.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: pjd:Pjdr2_4479 acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_003244956.1	KEGG: pjd:Pjdr2_4480 hypothetical protein
YP_003244957.1	PFAM: phosphatidylglycerophosphatase A; KEGG: pjd:Pjdr2_4481 phosphatidylglycerophosphatase A
YP_003244958.1	KEGG: pjd:Pjdr2_4482 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein
YP_003244959.1	KEGG: pjd:Pjdr2_4483 hypothetical protein
YP_003244960.1	KEGG: pjd:Pjdr2_4484 hypothetical protein
YP_003244961.1	KEGG: pjd:Pjdr2_4485 hypothetical protein
YP_003244962.1	PFAM: DRTGG domain protein; CBS domain containing protein; regulatory protein GntR HTH; SMART: CBS domain containing protein; KEGG: pjd:Pjdr2_4487 putative signal transduction protein with CBS and DRTGG domains
YP_003244963.1	KEGG: pjd:Pjdr2_4490 hypothetical protein
YP_003244964.1	PFAM: protein of unknown function DUF964; KEGG: bcl:ABC1519 hypothetical protein
YP_003244965.1	PFAM: protein of unknown function DUF445; KEGG: bli:BL02871 hypothetical protein
YP_003244966.1	KEGG: hypothetical protein
YP_003244967.1	KEGG: pjd:Pjdr2_4492 hypothetical protein
YP_003244968.1	KEGG: pjd:Pjdr2_4493 hypothetical protein
YP_003244969.1	KEGG: hypothetical protein
YP_003244970.1	KEGG: pjd:Pjdr2_4495 GCN5-related N-acetyltransferase
YP_003244971.1	KEGG: bbe:BBR47_25390 hypothetical protein
YP_003244972.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_4499 haloacid dehalogenase domain protein hydrolase
YP_003244975.1	KEGG: gtn:GTNG_0185 hypothetical protein
YP_003244976.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gtn:GTNG_0183 response regulator
YP_003244977.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gtn:GTNG_0182 sensory transduction histidine kinase
YP_003244978.1	PFAM: manganese containing catalase; KEGG: bbe:BBR47_22750 CotJC protein
YP_003244979.1	KEGG: bbe:BBR47_22740 CotJB protein
YP_003244980.1	KEGG: pjd:Pjdr2_4606 hypothetical protein
YP_003244981.1	TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: pjd:Pjdr2_4608 sporulation integral membrane protein YtvI
YP_003244982.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bbe:BBR47_08800 hypothetical protein
YP_003244983.1	PFAM: Radical SAM domain protein; KEGG: pjd:Pjdr2_4609 radical SAM domain protein
YP_003244984.1	PFAM: MMPL domain protein; KEGG: esi:Exig_2849 MmpL domain-containing protein
YP_003244985.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pjd:Pjdr2_4610 metal dependent phosphohydrolase
YP_003244986.1	KEGG: pjd:Pjdr2_1697 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_003244987.1	PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: pjd:Pjdr2_4611 metallophosphoesterase
YP_003244988.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; KEGG: pjd:Pjdr2_4613 molybdopterin biosynthesis MoaE protein
YP_003244989.1	KEGG: pjd:Pjdr2_4614 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003244990.1	TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: pjd:Pjdr2_4615 FeS assembly protein SufB
YP_003244991.1	TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: pjd:Pjdr2_4616 SUF system FeS assembly protein, NifU family
YP_003244992.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: pjd:Pjdr2_4617 cysteine desulfurase, SufS subfamily
YP_003244993.1	TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: pjd:Pjdr2_4618 FeS assembly protein SufD
YP_003244994.1	KEGG: pjd:Pjdr2_4619 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003244995.1	PFAM: Ferritin Dps family protein; KEGG: afl:Aflv_0401 DNA-binding ferritin-like protein (oxidative damage protectant)
YP_003244996.1	phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway
YP_003244997.1	KEGG: pjd:Pjdr2_4622 translation initiation factor, aIF-2BI family; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related
YP_003244998.1	PFAM: Domain of unknown function DUF1805; KEGG: bcy:Bcer98_3571 hypothetical protein
YP_003244999.1	KEGG: pjd:Pjdr2_4624 hypothetical protein
YP_003245000.1	PFAM: protein of unknown function DUF423; KEGG: bcl:ABC3922 hypothetical protein
YP_003245001.1	KEGG: pjd:Pjdr2_4627 hypothetical protein
YP_003245002.1	TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444; KEGG: pjd:Pjdr2_4702 sporulation protein YhbH
YP_003245003.1	PFAM: acyltransferase 3; KEGG: pjd:Pjdr2_2790 acyltransferase 3
YP_003245004.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: pjd:Pjdr2_0505 rhodanese domain protein
YP_003245005.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mla:Mlab_1666 aspartate/glutamate/uridylate kinase-like protein
YP_003245006.1	KEGG: lin:lin1447 hypothetical protein
YP_003245007.1	KEGG: cac:CAC3280 ChW repeat-containing protein
YP_003245008.1	PFAM: DinB family protein; KEGG: lsp:Bsph_2998 DinB
YP_003245009.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_39620 hypothetical protein
YP_003245010.1	KEGG: fjo:Fjoh_4155 hypothetical protein
YP_003245011.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pjd:Pjdr2_0602 short-chain dehydrogenase/reductase SDR
YP_003245013.1	PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: bld:BLi04161 YxkD
YP_003245014.1	KEGG: pjd:Pjdr2_5562 hypothetical protein
YP_003245015.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
YP_003245016.1	TIGRFAM: diaminopimelate dehydrogenase; KEGG: cno:NT01CX_0433 diaminopimelate dehydrogenase
YP_003245017.1	KEGG: bbe:BBR47_27780 putative aminotransferase
YP_003245018.1	PFAM: MORN repeat-containing protein; SMART: MORN repeat-containing protein; KEGG: hypothetical protein
YP_003245019.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pth:PTH_2894 dehydrogenases with different specificities
YP_003245020.1	KEGG: bce:BC0867 hypothetical protein
YP_003245021.1	PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bcu:BCAH820_B0223 transcriptional activator, AraC family
YP_003245022.1	PFAM: sodium/glutamate symporter; KEGG: nth:Nther_1560 sodium/glutamate symporter
YP_003245023.1	PFAM: transcription activator effector binding; KEGG: pjd:Pjdr2_6140 transcription activator effector binding
YP_003245024.1	PFAM: Helix-turn-helix type 11 domain protein; transcription activator effector binding; KEGG: bld:BLi01288 hypothetical protein
YP_003245025.1	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity
YP_003245026.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rxy:Rxyl_2100 short-chain dehydrogenase/reductase SDR
YP_003245027.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbe:BBR47_10960 transcriptional regulator
YP_003245028.1	KEGG: bbe:BBR47_03090 exodeoxyribonuclease; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_003245029.1	KEGG: pjd:Pjdr2_2763 hypothetical protein
YP_003245030.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH3222 hypothetical protein
YP_003245031.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bbe:BBR47_42420 RNA polymerase ECF-type sigma factor
YP_003245032.1	PFAM: periplasmic binding protein; KEGG: pjd:Pjdr2_0692 periplasmic binding protein
YP_003245033.1	PFAM: transport system permease protein; KEGG: bpu:BPUM_2992 ferrichrome ABC transporter membrane protein
YP_003245034.1	PFAM: transport system permease protein; KEGG: bcl:ABC1083 ferrichrome ABC transporter permease
YP_003245035.1	PFAM: protein of unknown function DUF214; KEGG: btk:BT9727_3141 ABC transporter, permease
YP_003245036.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcz:BCZK3052 ABC transporter, ATP-binding protein
YP_003245037.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bbe:BBR47_14610 putative alcohol dehydrogenase
YP_003245038.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bbe:BBR47_14620 transcriptional regulator
YP_003245039.1	PFAM: DinB family protein; KEGG: bay:RBAM_037680 DinB
YP_003245040.1	PFAM: glycoside hydrolase family 4; KEGG: pjd:Pjdr2_0850 glycoside hydrolase family 4
YP_003245041.1	PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: pjd:Pjdr2_0849 ATPase BadF/BadG/BcrA/BcrD type
YP_003245042.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4382 extracellular solute-binding protein family 1
YP_003245043.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4383 binding-protein-dependent transport systems inner membrane component
YP_003245044.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4384 binding-protein-dependent transport systems inner membrane component
YP_003245045.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_0848 transcriptional regulator, AraC family
YP_003245047.1	PFAM: glycoside hydrolase family 16; KEGG: pjd:Pjdr2_0952 glycoside hydrolase family 16
YP_003245048.1	PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1181 transcriptional regulator, AraC family
YP_003245049.1	KEGG: pjd:Pjdr2_0527 phytanoyl-CoA dioxygenase
YP_003245050.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: hypothetical protein
YP_003245051.1	PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gwc:GWCH70_1892 rhodanese domain protein
YP_003245052.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mla:Mlab_0378 hypothetical protein
YP_003245053.1	PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: rop:ROP_31290 hypothetical protein
YP_003245054.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_3099 binding-protein dependent transport system inner membrane protein
YP_003245055.1	KEGG: ava:Ava_4330 xenobiotic compound monooxygenase A subunit
YP_003245056.1	PFAM: aldo/keto reductase; KEGG: sth:STH1707 oxidoreductase
YP_003245057.1	PFAM: Luciferase-like, subgroup; KEGG: avn:Avin_22400 xenobiotic compound monooxygenase, DszA family, A subunit protein
YP_003245058.1	KEGG: bbe:BBR47_49140 hypothetical protein
YP_003245059.1	KEGG: bbe:BBR47_49150 hypothetical membrane protein
YP_003245060.1	PFAM: transcriptional regulator PadR family protein; KEGG: bbe:BBR47_49160 putative transcriptional regulator
YP_003245061.1	PFAM: Protein of unknown function DUF2062; KEGG: oan:Oant_2630 hypothetical protein
YP_003245062.1	PFAM: GerA spore germination protein; KEGG: gwc:GWCH70_2167 GerA spore germination protein
YP_003245063.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: gwc:GWCH70_2165 germination protein, Ger(X)C family
YP_003245065.1	PFAM: Spore germination protein; KEGG: pjd:Pjdr2_3600 spore germination protein
YP_003245066.1	PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: pjd:Pjdr2_4034 protein of unknown function DUF421
YP_003245067.1	PFAM: protein of unknown function DUF1657; KEGG: pjd:Pjdr2_4035 protein of unknown function DUF1657
YP_003245068.1	PFAM: PfkB domain protein; KEGG: pjd:Pjdr2_4468 PfkB domain protein
YP_003245069.1	TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: pjd:Pjdr2_0764 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
YP_003245070.1	PFAM: protein of unknown function DUF161; KEGG: pjd:Pjdr2_3818 protein of unknown function DUF161
YP_003245071.1	KEGG: rca:Rcas_1586 Zn-dependent hydrolase of the beta-lactamase fold-like protein
YP_003245072.1	TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: oih:OB0838 PTS system fructose-specific enzyme II BC component
YP_003245073.1	KEGG: lmh:LMHCC_0270 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein
YP_003245074.1	PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bcy:Bcer98_2396 DeoR family transcriptional regulator
YP_003245075.1	PFAM: heat shock protein DnaJ domain protein; KEGG: pjd:Pjdr2_3758 heat shock protein DnaJ domain protein
YP_003245076.1	KEGG: pjd:Pjdr2_0266 hypothetical protein
YP_003245077.1	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: hor:Hore_14660 DegV family protein
YP_003245078.1	KEGG: pjd:Pjdr2_5943 hypothetical protein
YP_003245079.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_003245080.1	PFAM: protein of unknown function DUF299; KEGG: pjd:Pjdr2_1215 protein of unknown function DUF299
YP_003245081.1	PFAM: CBS domain containing protein; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; SMART: CBS domain containing protein; KEGG: aac:Aaci_1607 putative signal transduction protein with CBS domains
YP_003245083.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bbe:BBR47_08790 hypothetical protein
YP_003245084.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: oih:OB0234 acylamino-acid-releasing enzyme
YP_003245085.1	PFAM: SpoVR family protein; KEGG: pjd:Pjdr2_4739 SpoVR family protein
YP_003245086.1	PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: pjd:Pjdr2_4768 methyl-accepting chemotaxis sensory transducer
YP_003245087.1	PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: pjd:Pjdr2_4769 putative serine protein kinase, PrkA
YP_003245088.1	KEGG: pjd:Pjdr2_4770 hypothetical protein
YP_003245089.1	PFAM: aminotransferase class I and II; KEGG: pjd:Pjdr2_4771 putative transcriptional regulator, GntR family
YP_003245090.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: gtn:GTNG_2063 two-component response regulator ComA
YP_003245091.1	KEGG: pjd:Pjdr2_0853 hypothetical protein
YP_003245092.1	KEGG: pjd:Pjdr2_0852 exopolysaccharide biosynthesis protein
YP_003245093.1	KEGG: pjd:Pjdr2_4772 hypothetical protein
YP_003245094.1	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: pjd:Pjdr2_4773 transcriptional regulator, AbrB family
YP_003245095.1	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pjd:Pjdr2_4774 RNA methyltransferase, TrmH family, group 2
YP_003245096.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_003245097.1	KEGG: cth:Cthe_0916 hypothetical protein
YP_003245098.1	KEGG: hor:Hore_04170 cellobiose phosphorylase
YP_003245099.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_0436 binding-protein-dependent transport systems inner membrane component
YP_003245100.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_0435 binding-protein-dependent transport systems inner membrane component
YP_003245101.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcv:Bcav_0434 extracellular solute-binding protein family 1
YP_003245102.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: afl:Aflv_2356 transcriptional regulator, LacI family (HTH and periplasmic-binding domains)
YP_003245103.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: pjd:Pjdr2_4778 glutamine synthetase, type I
YP_003245104.1	KEGG: pjd:Pjdr2_4779 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_003245105.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4380 histidine kinase
YP_003245106.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_4734 two component transcriptional regulator, AraC family
YP_003245107.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4382 extracellular solute-binding protein family 1
YP_003245108.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4383 binding-protein-dependent transport systems inner membrane component
YP_003245109.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4384 binding-protein-dependent transport systems inner membrane component
YP_003245110.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_003245111.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_4781 histidine kinase
YP_003245112.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pjd:Pjdr2_4782 two component transcriptional regulator, winged helix family
YP_003245113.1	KEGG: pjd:Pjdr2_4783 HtrA2 peptidase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein
YP_003245114.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: pjd:Pjdr2_4785 two component transcriptional regulator, LuxR family
YP_003245115.1	KEGG: pjd:Pjdr2_4786 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein
YP_003245116.1	PFAM: Cell wall-active antibiotics response protein; KEGG: pjd:Pjdr2_4787 membrane protein-like protein
YP_003245118.1	PFAM: 3D domain protein; KEGG: pjd:Pjdr2_4791 3D domain protein
YP_003245119.1	TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: pjd:Pjdr2_4792 threonyl-tRNA synthetase
YP_003245120.1	PFAM: Sporulation protein YtxC; KEGG: pjd:Pjdr2_4793 sporulation protein YtxC
YP_003245121.1	PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein
YP_003245122.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pjd:Pjdr2_4796 radical SAM domain protein
YP_003245123.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: pjd:Pjdr2_4797 cystathionine gamma-lyase
YP_003245124.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: pjd:Pjdr2_4798 cystathionine gamma-synthase
YP_003245125.1	KEGG: pjd:Pjdr2_4799 homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase
YP_003245126.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: pjd:Pjdr2_4800 magnesium and cobalt transport protein CorA
YP_003245127.1	PFAM: HRDC domain protein; KEGG: pjd:Pjdr2_1417 HRDC domain protein
YP_003245128.1	PFAM: ROK family protein; KEGG: lba:Lebu_0629 ROK family protein
YP_003245129.1	PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; KEGG: pjd:Pjdr2_1409 5'-3' exonuclease
YP_003245130.1	PFAM: arsenate reductase and related; KEGG: pjd:Pjdr2_1407 arsenate reductase and related
YP_003245131.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: pjd:Pjdr2_1406 pseudouridine synthase, RluA family
YP_003245132.1	KEGG: pjd:Pjdr2_1405 ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase
YP_003245134.1	PFAM: aminotransferase class I and II; KEGG: pjd:Pjdr2_1404 aminotransferase class I and II
YP_003245135.1	PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: pjd:Pjdr2_1403 transcriptional regulator, AsnC family
YP_003245136.1	PFAM: Coat F domain protein; KEGG: pjd:Pjdr2_1402 coat F domain protein
YP_003245137.1	KEGG: pjd:Pjdr2_1401 hypothetical protein
YP_003245138.1	PFAM: FAD dependent oxidoreductase; KEGG: bcz:BCZK1211 oxidoreductase
YP_003245139.1	KEGG: pjd:Pjdr2_1392 hypothetical protein
YP_003245140.1	KEGG: pjd:Pjdr2_1391 hypothetical protein
YP_003245141.1	PFAM: protein of unknown function DUF350; KEGG: pjd:Pjdr2_1390 protein of unknown function DUF350
YP_003245142.1	KEGG: pjd:Pjdr2_1389 MutS2 family protein; TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2
YP_003245143.1	PFAM: membrane protein of unknown function; KEGG: pjd:Pjdr2_1388 membrane protein of unknown function
YP_003245144.1	PFAM: cytochrome c oxidase subunit II; KEGG: pjd:Pjdr2_1387 cytochrome c oxidase subunit II
YP_003245145.1	PFAM: protein of unknown function DUF710; KEGG: pjd:Pjdr2_1385 hypothetical protein
YP_003245146.1	TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: pjd:Pjdr2_1384 phenylalanyl-tRNA synthetase, beta subunit
YP_003245147.1	KEGG: pjd:Pjdr2_1383 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein
YP_003245148.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: esi:Exig_0605 ABC transporter related
YP_003245149.1	PFAM: pyruvate carboxyltransferase; KEGG: pjd:Pjdr2_1367 pyruvate carboxyltransferase
YP_003245150.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: pjd:Pjdr2_1317 leucyl aminopeptidase
YP_003245151.1	KEGG: pjd:Pjdr2_1316 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_003245152.1	KEGG: pjd:Pjdr2_1313 hypothetical protein
YP_003245153.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pjd:Pjdr2_1308 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_003245154.1	KEGG: pjd:Pjdr2_1307 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_003245156.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_0467 aldo/keto reductase
YP_003245157.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: pjd:Pjdr2_1305 2-isopropylmalate synthase
YP_003245158.1	KEGG: pjd:Pjdr2_1304 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; CoA-binding domain protein; acetohydroxy acid isomeroreductase
YP_003245159.1	TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; KEGG: pjd:Pjdr2_1303 acetolactate synthase, small subunit
YP_003245160.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: pjd:Pjdr2_1302 acetolactate synthase, large subunit, biosynthetic type
YP_003245161.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_1301 GCN5-related N-acetyltransferase
YP_003245162.1	KEGG: pjd:Pjdr2_1300 hypothetical protein
YP_003245163.1	TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: pjd:Pjdr2_1290 ribosomal protein L20
YP_003245164.1	TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: pjd:Pjdr2_1289 ribosomal protein L35
YP_003245165.1	TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; KEGG: pjd:Pjdr2_1288 translation initiation factor IF-3
YP_003245166.1	PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_1287 glycosyl transferase family 2
YP_003245168.1	PFAM: Monogalactosyldiacylglycerol synthase; Glycosyltransferase 28 domain; KEGG: pjd:Pjdr2_5001 monogalactosyldiacylglycerol synthase
YP_003245169.1	KEGG: pjd:Pjdr2_1284 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase
YP_003245170.1	KEGG: pjd:Pjdr2_1283 hypothetical protein
YP_003245171.1	KEGG: pjd:Pjdr2_1282 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003245172.1	PFAM: putative rRNA methylase; KEGG: pjd:Pjdr2_1281 putative rRNA methylase
YP_003245173.1	KEGG: sth:STH1983 mannnose-6 phospate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I
YP_003245174.1	PFAM: alpha/beta hydrolase fold; KEGG: cbf:CLI_0585 alpha/beta fold family hydrolase
YP_003245175.1	KEGG: bbe:BBR47_58160 hypothetical protein
YP_003245176.1	KEGG: drm:Dred_1261 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein
YP_003245177.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: amt:Amet_1911 helix-turn-helix domain-containing protein
YP_003245178.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sth:STH1915 hypothetical protein
YP_003245179.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bwe:BcerKBAB4_5508 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003245180.1	S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine
YP_003245181.1	PFAM: FG-GAP repeat protein; KEGG: pjd:Pjdr2_2482 FG-GAP repeat protein
YP_003245182.1	PFAM: beta-lactamase domain protein; KEGG: lsp:Bsph_1470 zinc-dependent hydrolase
YP_003245183.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bbe:BBR47_42780 putative transcriptional regulator
YP_003245184.1	KEGG: pjd:Pjdr2_5418 hypothetical protein
YP_003245185.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bld:BLi00862 YfiE
YP_003245186.1	PFAM: protein of unknown function UPF0074; KEGG: bay:RBAM_005310 YwnA1
YP_003245187.1	KEGG: pjd:Pjdr2_5481 hypothetical protein
YP_003245188.1	PFAM: Auxin Efflux Carrier; KEGG: oih:OB2592 hypothetical protein
YP_003245189.1	PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase internal region; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: bbe:BBR47_58750 two-component hybrid sensor and regulator
YP_003245191.1	PFAM: response regulator receiver; transcriptional activator domain; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bbe:BBR47_58760 probable two-component response regulator
YP_003245192.1	KEGG: pjd:Pjdr2_2218 hypothetical protein
YP_003245193.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_2208 GCN5-related N-acetyltransferase
YP_003245194.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_5866 GCN5-related N-acetyltransferase
YP_003245196.1	PFAM: peptidase M24; creatinase; KEGG: bbe:BBR47_20130 putative Xaa-Pro dipeptidase/Xaa-Pro aminopeptidase
YP_003245197.1	PFAM: sodium:dicarboxylate symporter; KEGG: bwe:BcerKBAB4_4100 sodium:dicarboxylate symporter
YP_003245198.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: pjd:Pjdr2_3349 cobalamin 5'-phosphate synthase
YP_003245199.1	PFAM: cobalbumin biosynthesis protein; KEGG: pjd:Pjdr2_3351 adenosylcobinamide-phosphate guanylyltransferase
YP_003245200.1	KEGG: pjd:Pjdr2_3352 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_003245201.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_39360 ABC transporter ATP binding protein
YP_003245202.1	PFAM: transport system permease protein; KEGG: bbe:BBR47_39370 ABC transporter permease protein
YP_003245203.1	PFAM: periplasmic binding protein; KEGG: bbe:BBR47_39380 ABC transporter substrate binding protein
YP_003245204.1	PFAM: Phosphoglycerate mutase; KEGG: gtn:GTNG_2192 alpha-ribazole-5'-phosphate phosphatase
YP_003245205.1	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: bbe:BBR47_12440 cobalamin biosynthesis protein
YP_003245206.1	PFAM: protein of unknown function DUF105; KEGG: pjd:Pjdr2_3347 protein of unknown function DUF105
YP_003245207.1	PFAM: aminotransferase class I and II; KEGG: bbe:BBR47_12400 threonine-phosphate decarboxylase
YP_003245208.1	KEGG: gwc:GWCH70_1752 lipoyltransferase and lipoate-protein ligase; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: Lipoate protein ligase-like; biotin/lipoate A/B protein ligase
YP_003245209.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: pjd:Pjdr2_3302 membrane-bound metal-dependent hydrolase
YP_003245210.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gka:GK1350 hypothetical protein
YP_003245211.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: pjd:Pjdr2_1263 Cof-like hydrolase
YP_003245212.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcl:ABC3777 MarR family transcriptional regulator
YP_003245213.1	KEGG: sab:SAB2251c hypothetical protein
YP_003245214.1	PFAM: beta-lactamase domain protein; KEGG: pjd:Pjdr2_2643 beta-lactamase domain protein
YP_003245216.1	KEGG: cps:CPS_2866 hypothetical protein
YP_003245217.1	PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; KEGG: cyn:Cyan7425_1826 proteinase inhibitor I4 serpin
YP_003245218.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bwe:BcerKBAB4_1940 GCN5-related N-acetyltransferase
YP_003245219.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1262 sulfate ABC transporter, periplasmic sulfate-binding protein
YP_003245220.1	KEGG: pjd:Pjdr2_1261 sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_003245221.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1260 sulfate ABC transporter, inner membrane subunit
YP_003245222.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1259 sulfate ABC transporter, inner membrane subunit
YP_003245223.1	PFAM: protein of unknown function UPF0047; KEGG: pjd:Pjdr2_1306 protein of unknown function UPF0047
YP_003245224.1	PFAM: regulatory protein TetR; KEGG: bcg:BCG9842_B5392 transcriptional regulator, TetR family protein
YP_003245225.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: pjd:Pjdr2_1258 protein of unknown function UPF0029
YP_003245226.1	PFAM: phosphoglucose isomerase (PGI); KEGG: pjd:Pjdr2_1257 glucose-6-phosphate isomerase
YP_003245227.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: pjd:Pjdr2_1256 6-phosphogluconate dehydrogenase NAD-binding
YP_003245228.1	PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_3188 copper amine oxidase-like protein
YP_003245230.1	PFAM: protein of unknown function DUF1255; KEGG: pjd:Pjdr2_1255 protein of unknown function DUF1255
YP_003245231.1	TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: pjd:Pjdr2_1254 transketolase
YP_003245232.1	PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: bbe:BBR47_50240 hypothetical protein
YP_003245233.1	KEGG: hypothetical protein
YP_003245234.1	KEGG: bbe:BBR47_50260 hypothetical protein
YP_003245235.1	PFAM: ATPase associated with various cellular activities AAA_3; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bbe:BBR47_50270 hypothetical protein
YP_003245236.1	KEGG: bbe:BBR47_50280 hypothetical membrane protein
YP_003245237.1	KEGG: lsp:Bsph_1318 hypothetical protein
YP_003245238.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_50300 probable ABC transporter ATP binding protein
YP_003245239.1	KEGG: bbe:BBR47_50310 hypothetical protein
YP_003245240.1	TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: pjd:Pjdr2_1253 formyltetrahydrofolate deformylase
YP_003245241.1	KEGG: pjd:Pjdr2_1252 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2
YP_003245242.1	KEGG: pjd:Pjdr2_1251 hypothetical protein
YP_003245243.1	PFAM: copper amine oxidase domain protein; KEGG: hmo:HM1_2720 N-acetylmuramoyl-L-alanine amidase, putative
YP_003245244.1	PFAM: copper amine oxidase domain protein; KEGG: amt:Amet_0914 copper amine oxidase domain-containing protein
YP_003245245.1	PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: pjd:Pjdr2_1248 FHA domain containing protein
YP_003245246.1	PFAM: peptidase A24A prepilin type IV; KEGG: pjd:Pjdr2_1247 peptidase A24A prepilin type IV
YP_003245247.1	KEGG: pjd:Pjdr2_1246 hypothetical protein
YP_003245248.1	KEGG: hypothetical protein
YP_003245249.1	PFAM: TadE family protein; KEGG: hypothetical protein
YP_003245250.1	KEGG: pjd:Pjdr2_1243 hypothetical protein
YP_003245251.1	PFAM: Type II secretion system F domain; KEGG: hypothetical protein
YP_003245252.1	PFAM: Type II secretion system F domain; KEGG: pjd:Pjdr2_1241 type II secretion system protein
YP_003245253.1	PFAM: type II secretion system protein E; KEGG: pjd:Pjdr2_1240 type II secretion system protein E
YP_003245254.1	KEGG: pjd:Pjdr2_1239 hypothetical protein
YP_003245255.1	KEGG: lsp:Bsph_1248 thermonuclease precursor; PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein)
YP_003245256.1	PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: bha:BH1854 hypothetical protein
YP_003245257.1	KEGG: esi:Exig_0288 hypothetical protein
YP_003245258.1	PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: bsu:BSU31500 hypothetical protein
YP_003245259.1	PFAM: Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon domain; KEGG: mja:MJ1230 hypothetical protein
YP_003245260.1	TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein; KEGG: gka:GK1863 hypothetical protein
YP_003245261.1	PFAM: helix-turn-helix domain protein; CI repressor; SMART: helix-turn-helix domain protein; KEGG: tte:TTE2174 transcriptional regulator
YP_003245262.1	KEGG: dol:Dole_1339 PAS sensor protein
YP_003245263.1	PFAM: putative esterase; KEGG: bay:RBAM_029060 YuiI
YP_003245264.1	PFAM: transport system permease protein; KEGG: bwe:BcerKBAB4_3504 transport system permease protein
YP_003245265.1	PFAM: transport system permease protein; KEGG: bbe:BBR47_03440 probable iron-uptake ABC transporter permease protein
YP_003245266.1	PFAM: periplasmic binding protein; KEGG: bbe:BBR47_03430 probable iron-uptake ABC transporter substrate binding protein precursor
YP_003245267.1	PFAM: periplasmic binding protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bbe:BBR47_03420 probable transcriptional regulator
YP_003245268.1	PFAM: Stress-induced protein, KGG, repeat; KEGG: bld:BLi00534 GsiB
YP_003245269.1	PFAM: peptidase S51 dipeptidase E; KEGG: bay:RBAM_009050 YgaJ
YP_003245270.1	KEGG: bpu:BPUM_1949 transposase
YP_003245271.1	PFAM: Integrase catalytic region; KEGG: bay:RBAM_036580 transposases lmo0828-like protein
YP_003245272.1	PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: pjd:Pjdr2_4969 protein of unknown function DUF335 SprT
YP_003245273.1	KEGG: pjd:Pjdr2_4970 hypothetical protein
YP_003245274.1	KEGG: pjd:Pjdr2_4971 hypothetical protein
YP_003245275.1	KEGG: bbe:BBR47_11200 hypothetical protein
YP_003245276.1	PFAM: protein of unknown function DUF1470; KEGG: bbe:BBR47_11210 hypothetical protein
YP_003245277.1	PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: pjd:Pjdr2_4974 RNA binding S1 domain protein
YP_003245279.1	PFAM: PemK family protein; KEGG: bbe:BBR47_05000 endoribonuclease EndoA
YP_003245280.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: pjd:Pjdr2_1074 putative transcriptional regulator, CopG family
YP_003245281.1	KEGG: pjd:Pjdr2_1073 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_003245282.1	KEGG: pjd:Pjdr2_1072 outer membrane lipoprotein-sorting protein-like protein
YP_003245283.1	PFAM: major facilitator superfamily MFS_1; KEGG: bwe:BcerKBAB4_2974 major facilitator transporter
YP_003245284.1	KEGG: bha:BH0292 hypothetical protein
YP_003245285.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bcy:Bcer98_1070 GCN5-related N-acetyltransferase
YP_003245286.1	PFAM: putative esterase; KEGG: fno:Fnod_0083 putative esterase
YP_003245287.1	KEGG: pjd:Pjdr2_4503 hypothetical protein
YP_003245288.1	KEGG: pjd:Pjdr2_4502 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase; CBS domain containing protein
YP_003245289.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4501 binding-protein-dependent transport systems inner membrane component
YP_003245290.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: drm:Dred_3207 substrate-binding region of ABC-type glycine betaine transport system
YP_003245291.1	KEGG: pjd:Pjdr2_3926 hypothetical protein
YP_003245292.1	PFAM: UbiA prenyltransferase; KEGG: pjd:Pjdr2_3927 UbiA prenyltransferase
YP_003245293.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bcz:BCZK3965 LacI family transcription regulator
YP_003245295.1	KEGG: pjd:Pjdr2_5054 hypothetical protein
YP_003245296.1	PFAM: TIM-barrel signal transduction protein; KEGG: cbk:CLL_A2032 transcriptional regulator
YP_003245297.1	PFAM: conserved hypothetical protein; KEGG: cbi:CLJ_B1635 hypothetical protein
YP_003245298.1	PFAM: TIM-barrel signal transduction protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cbk:CLL_A2034 transcriptional regulator, AraC family protein
YP_003245299.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pjd:Pjdr2_1928 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_003245300.1	phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_003245302.1	KEGG: pjd:Pjdr2_6017 hypothetical protein
YP_003245303.1	KEGG: gtn:GTNG_2938 hypothetical protein
YP_003245306.1	KEGG: bbe:BBR47_45940 hypothetical protein
YP_003245307.1	KEGG: pjd:Pjdr2_1140 hypothetical protein
YP_003245308.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_3105 transcriptional regulator, LysR family
YP_003245309.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: pjd:Pjdr2_3227 metal dependent phosphohydrolase
YP_003245310.1	KEGG: pjd:Pjdr2_0099 nuclease
YP_003245312.1	TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: pjd:Pjdr2_1051 chaperonin GroEL
YP_003245313.1	PFAM: chaperonin Cpn10; KEGG: pjd:Pjdr2_1050 chaperonin Cpn10
YP_003245314.1	PFAM: Nucleotidyltransferase, predicted; KEGG: pjd:Pjdr2_4956 hypothetical protein
YP_003245315.1	KEGG: pjd:Pjdr2_4958 transcriptional regulator protein-like protein
YP_003245316.1	KEGG: pjd:Pjdr2_4959 hypothetical protein
YP_003245317.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: pjd:Pjdr2_1041 sec-independent protein translocase, TatC subunit
YP_003245318.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_003245319.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: pjd:Pjdr2_1038 molybdenum cofactor synthesis domain protein
YP_003245320.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: pjd:Pjdr2_1037 molybdenum cofactor biosynthesis protein C
YP_003245321.1	TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: pjd:Pjdr2_1036 5-formyltetrahydrofolate cyclo-ligase
YP_003245322.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_1035 ABC transporter related
YP_003245323.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: pjd:Pjdr2_1026 2-isopropylmalate synthase
YP_003245325.1	KEGG: pjd:Pjdr2_1024 metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease
YP_003245326.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_1023 ribosomal-protein-alanine acetyltransferase
YP_003245327.1	PFAM: peptidase M22 glycoprotease; KEGG: pjd:Pjdr2_1022 peptidase M22 glycoprotease
YP_003245328.1	PFAM: protein of unknown function UPF0079; KEGG: pjd:Pjdr2_1021 protein of unknown function UPF0079
YP_003245329.1	TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; KEGG: pjd:Pjdr2_4981 small acid-soluble spore protein, H-type
YP_003245330.1	KEGG: pjd:Pjdr2_4982 hypothetical protein
YP_003245331.1	KEGG: pjd:Pjdr2_4983 Ku protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein
YP_003245332.1	PFAM: ATP dependent DNA ligase; KEGG: pjd:Pjdr2_4984 ATP dependent DNA ligase
YP_003245333.1	TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain protein
YP_003245334.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aac:Aaci_2479 radical SAM domain protein
YP_003245335.1	PFAM: regulatory protein TetR; KEGG: bha:BH0317 hypothetical protein
YP_003245336.1	PFAM: beta-lactamase; KEGG: amt:Amet_1431 beta-lactamase
YP_003245337.1	PFAM: protein of unknown function DUF161; Protein of unknown function DUF2179; KEGG: pjd:Pjdr2_1019 protein of unknown function DUF161
YP_003245338.1	PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: aoe:Clos_0238 phospholipase D/transphosphatidylase
YP_003245339.1	PFAM: Peptidase M23; KEGG: dde:Dde_0243 M24/M37 family peptidase
YP_003245340.1	PFAM: protein of unknown function DUF583; KEGG: tte:TTE0840 hypothetical protein
YP_003245341.1	KEGG: pjd:Pjdr2_4990 hypothetical protein
YP_003245342.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_4991 ABC transporter related
YP_003245344.1	KEGG: bcv:Bcav_3444 hypothetical protein
YP_003245345.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: pjd:Pjdr2_4992 cell envelope-related transcriptional attenuator
YP_003245346.1	PFAM: VanZ family protein; KEGG: lsa:LSA1308 hypothetical protein
YP_003245347.1	PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II; KEGG: gka:GK3304 mannose-6-phosphate isomerase
YP_003245348.1	PFAM: glycosyl transferase group 1; KEGG: pjd:Pjdr2_0405 glycosyl transferase group 1
YP_003245349.1	KEGG: rce:RC1_0652 hypothetical protein
YP_003245350.1	KEGG: rce:RC1_0652 hypothetical protein
YP_003245351.1	PFAM: glycosyl transferase family 2; KEGG: rce:RC1_0655 glycosyl transferase, family 2, putative
YP_003245352.1	PFAM: glycosyl transferase family 2; KEGG: rce:RC1_0657 glycosyl transferase, group 2 family protein
YP_003245353.1	PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: rxy:Rxyl_1942 polysaccharide biosynthesis protein
YP_003245354.1	TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: chl:Chy400_1225 GDP-mannose 4,6-dehydratase
YP_003245355.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: pjd:Pjdr2_0403 NAD-dependent epimerase/dehydratase
YP_003245356.1	PFAM: sugar transferase; KEGG: gtn:GTNG_3263 priming glycosyltransferase
YP_003245357.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bcl:ABC3098 UTP-glucose-1-phosphate uridylyltransferase
YP_003245358.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: pjd:Pjdr2_0399 lipopolysaccharide biosynthesis protein
YP_003245359.1	KEGG: hypothetical protein
YP_003245360.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_4263 ABC transporter related
YP_003245361.1	KEGG: ach:Achl_4034 peptidase S26B, signal peptidase
YP_003245362.1	KEGG: amr:AM1_1921 hypothetical protein
YP_003245363.1	KEGG: bvu:BVU_4153 hypothetical protein
YP_003245365.1	KEGG: cyn:Cyan7425_3358 hypothetical protein
YP_003245366.1	TIGRFAM: capsular exopolysaccharide family; KEGG: pjd:Pjdr2_1225 capsular exopolysaccharide family
YP_003245368.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pjd:Pjdr2_4996 transcriptional regulator, XRE family
YP_003245370.1	PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: pjd:Pjdr2_4998 glutamate synthase (ferredoxin)
YP_003245372.1	TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; PFAM: ABC-2 type transporter; KEGG: afl:Aflv_2276 predicted membrane protein
YP_003245373.1	PFAM: regulatory protein TetR; KEGG: bcy:Bcer98_0833 TetR family transcriptional regulator
YP_003245374.1	PFAM: Monogalactosyldiacylglycerol synthase; KEGG: pjd:Pjdr2_5001 monogalactosyldiacylglycerol synthase
YP_003245375.1	PFAM: beta-lactamase domain protein; KEGG: bpu:BPUM_2573 metal-dependent hydrolase
YP_003245376.1	PFAM: cell wall hydrolase SleB; KEGG: bsu:BSU13820 hypothetical protein
YP_003245377.1	TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: gwc:GWCH70_2754 2'-5' RNA ligase
YP_003245378.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: oih:OB0844 dehydrogenase
YP_003245379.1	PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pjd:Pjdr2_5983 methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding
YP_003245380.1	PFAM: putative RNA methylase; KEGG: btk:BT9727_0797 methyltransferase
YP_003245381.1	TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: gtn:GTNG_1480 luciferase-like monooxygenase
YP_003245382.1	KEGG: pjd:Pjdr2_5890 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_003245383.1	PFAM: Alginate lyase 2; coagulation factor 5/8 type domain protein; KEGG: sde:Sde_2478 cyclic nucleotide-binding domain-containing protein
YP_003245384.1	PFAM: coagulation factor 5/8 type domain protein; Alpha/beta hydrolase fold-3 domain protein; Fibronectin type III domain protein; KEGG: rba:RB3413 lipase/esterase
YP_003245386.1	PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: bbe:BBR47_53540 putative peptidoglycan hydrolase
YP_003245387.1	TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: bce:BC2599 holin
YP_003245388.1	TIGRFAM: phage uncharacterized protein, XkdX family; PFAM: uncharacterised protein XkdX; KEGG: bcl:ABC2819 hypothetical protein
YP_003245389.1	KEGG: bbe:BBR47_50860 hypothetical protein
YP_003245390.1	KEGG: pjd:Pjdr2_1559 hypothetical protein
YP_003245391.1	KEGG: amt:Amet_2431 phage-like element pbsx protein XkdT
YP_003245392.1	PFAM: Baseplate J family protein; KEGG: pjd:Pjdr2_5169 baseplate J family protein
YP_003245393.1	KEGG: dhd:Dhaf_1420 hypothetical protein
YP_003245394.1	KEGG: cbi:CLJ_B1835 hypothetical protein
YP_003245395.1	KEGG: dhd:Dhaf_1418 phage protein
YP_003245396.1	PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: dhd:Dhaf_1417 peptidoglycan-binding LysM
YP_003245397.1	KEGG: dsy:DSY3954 hypothetical protein
YP_003245398.1	PFAM: XkdN-like protein; KEGG: cdf:CD2908 phage protein
YP_003245399.1	PFAM: XkdM protein, phage-like element PBSX; KEGG: cbi:CLJ_B1828 core tail protein
YP_003245400.1	KEGG: dhd:Dhaf_1413 phage protein
YP_003245401.1	KEGG: pjd:Pjdr2_5178 hypothetical protein
YP_003245405.1	PFAM: Kelch repeat-containing protein; SMART: Kelch repeat-containing protein; KEGG: cce:Ccel_0108 kelch repeat protein
YP_003245407.1	PFAM: Protein of unknown function DUF2313, Mu protein gp48; KEGG: dhd:Dhaf_4813 hypothetical protein
YP_003245408.1	PFAM: Baseplate J family protein; KEGG: dae:Dtox_4250 baseplate J family protein
YP_003245409.1	KEGG: dae:Dtox_4249 hypothetical protein
YP_003245410.1	KEGG: dae:Dtox_4248 hypothetical protein
YP_003245411.1	KEGG: hypothetical protein
YP_003245412.1	PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: hypothetical protein
YP_003245413.1	KEGG: vha:VIBHAR_01999 hypothetical protein
YP_003245415.1	PFAM: XkdN-like protein; KEGG: amt:Amet_2566 phage XkdN-like protein
YP_003245416.1	PFAM: XkdM protein, phage-like element PBSX; KEGG: cby:CLM_2515 hypothetical protein
YP_003245417.1	KEGG: dae:Dtox_4241 hypothetical protein
YP_003245418.1	KEGG: bld:BLi01336 hypothetical protein
YP_003245419.1	KEGG: dae:Dtox_4239 hypothetical protein
YP_003245420.1	TIGRFAM: phage transcriptional regulator, ArpU family; KEGG: bcl:ABC1379 hypothetical protein
YP_003245421.1	PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bha:BH3549 immunity repressor protein (phage-related protein)
YP_003245422.1	PFAM: protein of unknown function DUF955; KEGG: drm:Dred_0019 hypothetical protein
YP_003245423.1	KEGG: cpy:Cphy_2160 hypothetical protein
YP_003245424.1	PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: cbe:Cbei_3413 AraC protein, arabinose-binding/dimerisation
YP_003245425.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cbe:Cbei_3414 lysine exporter protein LysE/YggA
YP_003245426.1	PFAM: small multidrug resistance protein; KEGG: bsu:BSU33570 hypothetical protein
YP_003245427.1	PFAM: regulatory protein TetR; KEGG: bcq:BCQ_3104 transcriptional regulator, TetR family
YP_003245428.1	PFAM: cobalt transport protein; KEGG: gwc:GWCH70_0609 cobalt transport protein
YP_003245429.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK0620 hypothetical protein
YP_003245430.1	PFAM: ABC-type thiamin-related transport system, permease component 1, predicted; KEGG: gwc:GWCH70_0607 hypothetical protein
YP_003245431.1	KEGG: pjd:Pjdr2_1428 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related
YP_003245432.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: afl:Aflv_1418 short chain dehydrogenase
YP_003245433.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1427 transcriptional regulator, AraC family
YP_003245434.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bbe:BBR47_07010 probable transcriptional regulator
YP_003245435.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bbe:BBR47_14170 hypothetical protein
YP_003245436.1	PFAM: aminotransferase class I and II; KEGG: pjd:Pjdr2_1425 aminotransferase class I and II
YP_003245437.1	PFAM: ABC transporter EcsB; KEGG: pjd:Pjdr2_1424 ABC transporter EcsB
YP_003245438.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_1423 ABC transporter related
YP_003245439.1	PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: pjd:Pjdr2_1421 DEAD/DEAH box helicase domain protein
YP_003245440.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_0611 transcriptional regulator, LysR family
YP_003245441.1	KEGG: pjd:Pjdr2_0612 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase
YP_003245442.1	KEGG: fre:Franean1_4636 alpha/beta hydrolase fold
YP_003245443.1	PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bha:BH1889 hypothetical protein
YP_003245444.1	PFAM: DNA polymerase beta domain protein region; KEGG: cth:Cthe_1680 DNA polymerase, beta-like region
YP_003245445.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pjd:Pjdr2_1420 short-chain dehydrogenase/reductase SDR
YP_003245446.1	PFAM: CheC domain protein; KEGG: pjd:Pjdr2_1419 CheC domain protein
YP_003245447.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_4803 transcriptional regulator, LysR family
YP_003245448.1	TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: pjd:Pjdr2_4804 histidinol phosphate phosphatase HisJ family
YP_003245449.1	PFAM: metallophosphoesterase; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: bbe:BBR47_23550 hypothetical protein
YP_003245450.1	PFAM: Aldehyde Dehydrogenase; KEGG: pjd:Pjdr2_5985 aldehyde dehydrogenase
YP_003245451.1	PFAM: Ion transport 2 domain protein; KEGG: gfo:GFO_1249 membrane protein
YP_003245452.1	PFAM: aminoglycoside 3-N-acetyltransferase; KEGG: bcy:Bcer98_2002 aminoglycoside N(3')-acetyltransferase
YP_003245453.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_003245454.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_003245455.1	TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: pjd:Pjdr2_4810 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
YP_003245456.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_4811 transcriptional regulator, LysR family
YP_003245457.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: pjd:Pjdr2_4813 TrkA-N domain protein
YP_003245458.1	KEGG: pjd:Pjdr2_4814 potassium uptake protein, TrkH family; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter
YP_003245459.1	PFAM: Abortive infection protein; KEGG: pjd:Pjdr2_4815 abortive infection protein
YP_003245460.1	KEGG: pjd:Pjdr2_4818 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein
YP_003245461.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bbe:BBR47_16730 thioredoxin
YP_003245462.1	KEGG: pjd:Pjdr2_4819 hypothetical protein
YP_003245463.1	PFAM: Primosomal DnaI domain protein; SMART: AAA ATPase; KEGG: pjd:Pjdr2_4829 AAA ATPase
YP_003245464.1	PFAM: replication initiation and membrane attachment family protein; KEGG: pjd:Pjdr2_4830 replication initiation and membrane attachment family protein
YP_003245465.1	KEGG: pjd:Pjdr2_4831 hypothetical protein
YP_003245466.1	PFAM: Chlorite dismutase; KEGG: pjd:Pjdr2_4832 chlorite dismutase
YP_003245467.1	KEGG: pjd:Pjdr2_4833 hypothetical protein
YP_003245468.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pjd:Pjdr2_4834 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003245469.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: pjd:Pjdr2_4835 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003245470.1	KEGG: gwc:GWCH70_2461 sporulation inhibitor A
YP_003245471.1	KEGG: pjd:Pjdr2_4838 hypothetical protein
YP_003245473.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: pjd:Pjdr2_4850 iron-sulfur cluster assembly accessory protein
YP_003245474.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pjd:Pjdr2_4851 radical SAM domain protein
YP_003245475.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pjd:Pjdr2_4852 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003245476.1	PFAM: protein of unknown function DUF1450; KEGG: bbe:BBR47_47740 hypothetical protein
YP_003245477.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: pjd:Pjdr2_4854 nitrogen-fixing NifU domain protein
YP_003245478.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003245479.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bbe:BBR47_04630 methionine ABC transporter substrate binding protein precursor
YP_003245480.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_04620 methionine ABC transporter permease protein
YP_003245481.1	PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; KEGG: bbe:BBR47_04610 methionine ABC transporter ATP-binding protein
YP_003245482.1	KEGG: pjd:Pjdr2_4856 hypothetical protein
YP_003245483.1	PFAM: cytochrome oxidase assembly; KEGG: bbe:BBR47_49800 cytochrome aa3 controlling protein
YP_003245484.1	PFAM: Thioredoxin domain; KEGG: pjd:Pjdr2_4859 thioredoxin domain protein
YP_003245485.1	PFAM: Protein of unknown function DUF2515; KEGG: pjd:Pjdr2_3738 hypothetical protein
YP_003245486.1	PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: pjd:Pjdr2_4861 polysaccharide biosynthesis protein
YP_003245487.1	PFAM: protein of unknown function DUF456; KEGG: pjd:Pjdr2_4863 protein of unknown function DUF456
YP_003245488.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_4864 Cof-like hydrolase
YP_003245489.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: smd:Smed_5848 activator of HSP90 ATPase 1 family protein
YP_003245490.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pjd:Pjdr2_4869 peptidoglycan glycosyltransferase
YP_003245491.1	PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pjd:Pjdr2_4870 transglutaminase domain protein
YP_003245492.1	KEGG: pjd:Pjdr2_4871 hypothetical protein
YP_003245493.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_4872 major facilitator superfamily MFS_1
YP_003245494.1	KEGG: pjd:Pjdr2_4874 toprim domain protein
YP_003245495.1	PFAM: electron transport protein SCO1/SenC; KEGG: pjd:Pjdr2_4876 electron transport protein SCO1/SenC
YP_003245496.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_003245497.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: pjd:Pjdr2_4881 small acid-soluble spore protein alpha/beta type
YP_003245498.1	KEGG: pjd:Pjdr2_4882 hypothetical protein
YP_003245499.1	KEGG: pjd:Pjdr2_4883 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_003245500.1	PFAM: Aldose 1-epimerase; KEGG: bsu:BSU18360 hypothetical protein
YP_003245501.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: pjd:Pjdr2_4881 small acid-soluble spore protein alpha/beta type
YP_003245502.1	KEGG: pjd:Pjdr2_4886 hypothetical protein
YP_003245503.1	TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: sth:STH1987 oligoendopeptidase F
YP_003245504.1	KEGG: pjd:Pjdr2_1211 hypothetical protein
YP_003245505.1	KEGG: pjd:Pjdr2_1210 hypothetical protein
YP_003245506.1	PFAM: Protein of unknown function DUF2225; KEGG: pjd:Pjdr2_1209 hypothetical protein
YP_003245507.1	PFAM: globin; KEGG: pjd:Pjdr2_1208 globin
YP_003245508.1	TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: pjd:Pjdr2_1206 sporulation integral membrane protein YlbJ
YP_003245509.1	PFAM: ATP-NAD/AcoX kinase; KEGG: pjd:Pjdr2_1205 ATP-NAD/AcoX kinase
YP_003245510.1	PFAM: protein of unknown function DUF1027; KEGG: pjd:Pjdr2_1204 hypothetical protein
YP_003245511.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_003245512.1	PFAM: Peptidase M23; KEGG: pjd:Pjdr2_1202 peptidase M23
YP_003245513.1	TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like; KEGG: pjd:Pjdr2_1201 sporulation protein YunB
YP_003245514.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pjd:Pjdr2_5367 transcriptional regulator, ArsR family
YP_003245515.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pjd:Pjdr2_5368 activator of HSP90 ATPase 1 family protein
YP_003245516.1	PFAM: Domain of unknown function DUF1801; KEGG: lsp:Bsph_2455 hypothetical protein
YP_003245517.1	PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: pjd:Pjdr2_1123 tRNA/rRNA methyltransferase (SpoU)
YP_003245518.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: pjd:Pjdr2_1122 TrkA-N domain protein
YP_003245519.1	TIGRFAM: small, acid-soluble spore protein I; KEGG: pjd:Pjdr2_1121 small, acid-soluble spore protein I
YP_003245520.1	TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: pjd:Pjdr2_1113 peptide chain release factor 3
YP_003245521.1	KEGG: pjd:Pjdr2_1111 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase
YP_003245523.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: pjd:Pjdr2_1107 two component transcriptional regulator, LuxR family
YP_003245524.1	KEGG: bbe:BBR47_10070 two-component sensor histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_003245525.1	PFAM: Cell wall-active antibiotics response protein; KEGG: eat:EAT1b_2355 membrane protein-like protein
YP_003245526.1	PFAM: PspA/IM30 family protein; KEGG: pjd:Pjdr2_1105 phage shock protein A, PspA
YP_003245527.1	PFAM: PspC domain protein; KEGG: pjd:Pjdr2_1104 phage shock protein C, PspC
YP_003245528.1	PFAM: PspA/IM30 family protein; KEGG: pjd:Pjdr2_1103 phage shock protein A, PspA
YP_003245529.1	KEGG: pjd:Pjdr2_1102 hypothetical protein
YP_003245530.1	KEGG: pjd:Pjdr2_1097 hypothetical protein
YP_003245531.1	KEGG: pjd:Pjdr2_1096 hypothetical protein
YP_003245532.1	PFAM: glycoside hydrolase family 18; copper amine oxidase domain protein; SMART: chitinase II; KEGG: pjd:Pjdr2_1095 glycoside hydrolase family 18
YP_003245533.1	PFAM: ferric-uptake regulator; KEGG: pjd:Pjdr2_1094 ferric uptake regulator, Fur family
YP_003245534.1	KEGG: pjd:Pjdr2_1093 hypothetical protein
YP_003245535.1	KEGG: pjd:Pjdr2_1093 hypothetical protein
YP_003245536.1	PFAM: MgtC/SapB transporter; KEGG: pjd:Pjdr2_1092 MgtC/SapB transporter
YP_003245537.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbe:BBR47_21180 hypothetical protein
YP_003245538.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; GatB central domain protein; KEGG: pjd:Pjdr2_1091 glutamyl-tRNA(Gln) amidotransferase, B subunit
YP_003245539.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_003245540.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: pjd:Pjdr2_1089 glutamyl-tRNA(Gln) amidotransferase, C subunit
YP_003245541.1	KEGG: pjd:Pjdr2_1088 hypothetical protein
YP_003245542.1	KEGG: bcl:ABC1971 hypothetical protein
YP_003245543.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU38660 hypothetical protein
YP_003245544.1	KEGG: lsp:Bsph_0656 YxlE
YP_003245545.1	KEGG: bld:BLi04107 YxlD
YP_003245546.1	KEGG: bld:BLi04108 YxlC
YP_003245547.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_003245549.1	PFAM: beta-lactamase domain protein; KEGG: pjd:Pjdr2_4975 beta-lactamase domain protein
YP_003245550.1	KEGG: pjd:Pjdr2_4976 hypothetical protein
YP_003245551.1	PFAM: SNARE associated Golgi protein; KEGG: bca:BCE_2872 DedA family protein
YP_003245552.1	KEGG: pjd:Pjdr2_4979 hypothetical protein
YP_003245553.1	PFAM: O-antigen polymerase; KEGG: dau:Daud_1732 tetratricopeptide TPR_4
YP_003245554.1	KEGG: pjd:Pjdr2_1015 hypothetical protein
YP_003245555.1	KEGG: hypothetical protein
YP_003245556.1	PFAM: alpha/beta hydrolase fold; KEGG: bbe:BBR47_18090 hypothetical protein
YP_003245557.1	TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: pjd:Pjdr2_1012 sporulation protein YyaC
YP_003245558.1	PFAM: protein of unknown function DUF1128; KEGG: pjd:Pjdr2_1011 protein of unknown function DUF1128
YP_003245559.1	PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: gtn:GTNG_3041 putative pirin-like protein
YP_003245560.1	PFAM: L-asparaginase II; KEGG: bbe:BBR47_45820 hypothetical protein
YP_003245561.1	PFAM: Transglycosylase-associated protein; KEGG: bsu:BSU04370 hypothetical protein
YP_003245562.1	KEGG: pjd:Pjdr2_2083 general stress protein
YP_003245563.1	KEGG: bbe:BBR47_38800 hypothetical protein
YP_003245564.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: pjd:Pjdr2_1003 Mg2 transporter protein CorA family protein
YP_003245565.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 3 domain protein; KEGG: pjd:Pjdr2_1824 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
YP_003245566.1	PFAM: ATP-binding region ATPase domain protein; KEGG: gka:GK3423 serine-protein kinase RsbW
YP_003245567.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: gka:GK3422 stage II sporulation protein AA (anti-anti-sigma factor,antagonist of SpoIIAB)
YP_003245568.1	PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: dae:Dtox_3783 histidine kinase
YP_003245569.1	PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; KEGG: ana:all1848 hypothetical protein
YP_003245570.1	PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; KEGG: npu:Npun_R2375 multi-sensor hybrid histidine kinase
YP_003245571.1	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: pjd:Pjdr2_1863 response regulator receiver modulated serine phosphatase
YP_003245572.1	KEGG: bld:BLi00779 YflT
YP_003245573.1	KEGG: pjd:Pjdr2_1862 hypothetical protein
YP_003245574.1	PFAM: protein of unknown function DUF948; KEGG: pjd:Pjdr2_1826 protein of unknown function DUF948
YP_003245575.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_0858 drug resistance transporter, EmrB/QacA subfamily
YP_003245576.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pjd:Pjdr2_0857 transcriptional regulator, MarR family
YP_003245577.1	KEGG: pjd:Pjdr2_0469 hypothetical protein
YP_003245579.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pjd:Pjdr2_5006 cation diffusion facilitator family transporter
YP_003245580.1	KEGG: bbe:BBR47_26120 hypothetical protein
YP_003245581.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5007 ABC transporter related
YP_003245582.1	KEGG: pjd:Pjdr2_5009 hypothetical protein
YP_003245584.1	KEGG: gwc:GWCH70_0553 cytochrome bd-type ubiquinol oxidase subunit II
YP_003245585.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gwc:GWCH70_0552 cytochrome bd ubiquinol oxidase subunit I
YP_003245587.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: pjd:Pjdr2_5010 PBS lyase heat domain protein repeat-containing protein
YP_003245588.1	PFAM: amino acid permease-associated region; KEGG: bcg:BCG9842_B2176 lysine-specific permease
YP_003245589.1	PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pjd:Pjdr2_5011 transglutaminase domain protein
YP_003245590.1	PFAM: S-layer domain protein; KEGG: pjd:Pjdr2_4980 S-layer domain protein
YP_003245591.1	TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: pjd:Pjdr2_5139 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
YP_003245592.1	TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: pjd:Pjdr2_5158 xylulokinase
YP_003245593.1	KEGG: gtn:GTNG_1757 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel
YP_003245594.1	PFAM: ROK family protein; KEGG: pjd:Pjdr2_5182 ROK family protein
YP_003245595.1	KEGG: pjd:Pjdr2_2269 hypothetical protein
YP_003245596.1	PFAM: glutaredoxin; KEGG: bbe:BBR47_13510 hypothetical protein
YP_003245597.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pjd:Pjdr2_0169 thioredoxin reductase
YP_003245598.1	KEGG: mba:Mbar_A3344 hypothetical protein
YP_003245599.1	TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bha:BH0744 cadmium-transporting ATPase
YP_003245600.1	KEGG: lsp:Bsph_2622 hypothetical protein
YP_003245601.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
YP_003245602.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dth:DICTH_1661 versicolorin reductase
YP_003245603.1	KEGG: bcg:BCG9842_B0451 hypothetical protein
YP_003245604.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hmu:Hmuk_2521 ABC transporter related
YP_003245606.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: cbi:CLJ_B3632 RNA polymerase sigma factor
YP_003245607.1	KEGG: cno:NT01CX_1186 hypothetical protein
YP_003245608.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fre:Franean1_3995 ABC transporter related
YP_003245609.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_0641 aldo/keto reductase
YP_003245610.1	PFAM: protein of unknown function DUF81; KEGG: bbe:BBR47_00530 hypothetical protein
YP_003245612.1	KEGG: amt:Amet_4221 hypothetical protein
YP_003245613.1	KEGG: amt:Amet_4222 hypothetical protein
YP_003245614.1	KEGG: bha:BH1784 hypothetical protein
YP_003245615.1	PFAM: glycoside hydrolase clan GH-D; KEGG: pjd:Pjdr2_5454 glycoside hydrolase clan GH-D
YP_003245616.1	PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase
YP_003245617.1	PFAM: extracellular solute-binding protein family 1; KEGG: eat:EAT1b_2326 extracellular solute-binding protein family 1
YP_003245618.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_2020 binding-protein-dependent transport systems inner membrane component
YP_003245619.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esi:Exig_0580 binding-protein-dependent transport systems inner membrane component
YP_003245620.1	PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_2022 histidine kinase
YP_003245621.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_2023 two component transcriptional regulator, AraC family
YP_003245623.1	PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase
YP_003245624.1	KEGG: pjd:Pjdr2_1937 alpha-L-fucosidase
YP_003245625.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1936 hypothetical protein
YP_003245626.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_3733 binding-protein-dependent transport systems inner membrane component
YP_003245627.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1911 transmembrane lipoprotein
YP_003245628.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1933 two component transcriptional regulator, AraC family
YP_003245629.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_1932 histidine kinase
YP_003245630.1	catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides
YP_003245631.1	PFAM: Cupin 2 conserved barrel domain protein; AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1929 transcriptional regulator, AraC family
YP_003245632.1	PFAM: Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII; chitinase II; KEGG: jde:Jden_1381 chitinase
YP_003245633.1	PFAM: Protein of unknown function YqcI/YcgG; KEGG: bai:BAA_3171 hypothetical protein
YP_003245634.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bbe:BBR47_04530 ribonuclease J 1
YP_003245635.1	PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: pjd:Pjdr2_2738 major facilitator superfamily MFS_1
YP_003245636.1	KEGG: gwc:GWCH70_0414 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_003245637.1	KEGG: pjd:Pjdr2_0993 hypothetical protein
YP_003245638.1	PFAM: SNARE associated Golgi protein; KEGG: pjd:Pjdr2_1069 SNARE associated Golgi protein
YP_003245639.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: hmo:HM1_1020 phosphomethylpyrimidine kinase
YP_003245640.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bbe:BBR47_40790 methionine aminopeptidase
YP_003245642.1	PFAM: Integral membrane protein TerC; KEGG: bsu:BSU13440 hypothetical protein
YP_003245643.1	KEGG: bbe:BBR47_47640 hypothetical protein
YP_003245644.1	PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: hypothetical protein
YP_003245645.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bbe:BBR47_15200 hypothetical protein
YP_003245646.1	PFAM: FAD linked oxidase domain protein; KEGG: bbe:BBR47_15190 putative FAD linked oxidase
YP_003245647.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_003245648.1	PFAM: conserved hypothetical protein; KEGG: tte:TTE0214 hypothetical protein
YP_003245649.1	KEGG: bcl:ABC3121 hypothetical protein
YP_003245650.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bcl:ABC3122 sugar ABC transporter ATP-binding protein
YP_003245651.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3123 sugar ABC transporter permease
YP_003245652.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3124 sugar ABC transporter permease
YP_003245653.1	PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC3125 sugar ABC transporter substrate-binding protein
YP_003245654.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: amt:Amet_4190 RpiR family transcriptional regulator
YP_003245655.1	PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: amt:Amet_4191 ATPase, BadF/BadG/BcrA/BcrD type
YP_003245656.1	TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS); KEGG: tex:Teth514_0172 N-acetylmuramic acid-6-phosphate etherase
YP_003245657.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: oih:OB1722 alcohol dehydrogenase
YP_003245658.1	PFAM: Glycosyl transferase, family 4, conserved region; KEGG: pjd:Pjdr2_0539 glycosyl transferase family 4
YP_003245659.1	KEGG: bpu:BPUM_3585 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like
YP_003245660.1	TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: bcz:BCZK1344 purine nucleoside phosphorylase
YP_003245661.1	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose
YP_003245662.1	TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: bld:BLi04228 NupC
YP_003245663.1	KEGG: gwc:GWCH70_2432 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
YP_003245664.1	PFAM: putative sugar-binding domain protein; KEGG: bpu:BPUM_3588 DeoR family transcriptional regulator
YP_003245665.1	PFAM: MMPL domain protein; KEGG: gtn:GTNG_0680 export protein
YP_003245666.1	KEGG: gwc:GWCH70_0168 hypothetical protein
YP_003245667.1	PFAM: regulatory protein TetR; KEGG: gtn:GTNG_0679 TetR family transcriptional regulator
YP_003245668.1	PFAM: protein of unknown function DUF1037; KEGG: pjd:Pjdr2_5047 protein of unknown function DUF1037
YP_003245669.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5049 transcriptional regulator, AraC family
YP_003245670.1	KEGG: pjd:Pjdr2_3850 ribonuclease H-related protein
YP_003245671.1	KEGG: bay:RBAM_021660 YqkK
YP_003245673.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: pjd:Pjdr2_0554 helix-turn-helix type 11 domain protein
YP_003245674.1	PFAM: DinB family protein; KEGG: bwe:BcerKBAB4_0794 DinB family protein
YP_003245675.1	PFAM: Protein of unknown function DUF2179; KEGG: dhd:Dhaf_3052 hypothetical protein
YP_003245676.1	TIGRFAM: ectoine hydroxylase; PFAM: Phytanoyl-CoA dioxygenase; KEGG: noc:Noc_1560 phytanoyl-CoA dioxygenase
YP_003245677.1	N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid
YP_003245678.1	catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde
YP_003245679.1	KEGG: noc:Noc_1562 proteinase inhibitor I3, Kunitz legume; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_003245680.1	KEGG: dsy:DSY0741 hypothetical protein; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003245681.1	TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuD; polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_0748 ectoine/hydroxyectoine ABC transporter, permease protein EhuD
YP_003245682.1	TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuC; polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_0747 ectoine/hydroxyectoine ABC transporter, permease protein EhuC
YP_003245683.1	KEGG: dhd:Dhaf_0746 ectoine/hydroxyectoine ABC transporter solute-binding protein; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3
YP_003245685.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbe:BBR47_10970 glucose 1-dehydrogenase
YP_003245686.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: bwe:BcerKBAB4_5120 putative flavin reductase
YP_003245687.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbe:BBR47_03280 putative ring-cleaving dioxygenase MhqO
YP_003245688.1	PFAM: protein of unknown function UPF0118; KEGG: pjd:Pjdr2_0912 protein of unknown function UPF0118
YP_003245689.1	PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: bld:BLi03895 YwnE
YP_003245690.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: pjd:Pjdr2_4146 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003245691.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pjd:Pjdr2_1379 transcriptional regulator, MarR family
YP_003245692.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbe:BBR47_14860 hypothetical protein
YP_003245693.1	KEGG: pjd:Pjdr2_1796 glycoside hydrolase family 18; PFAM: glycoside hydrolase family 18; S-layer domain protein; Fibronectin type III domain protein; SMART: chitinase II; Fibronectin type III domain protein
YP_003245694.1	KEGG: bcl:ABC1019 hypothetical protein
YP_003245696.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bha:BH3858 MerR family transcriptional regulator
YP_003245697.1	PFAM: nitroreductase; KEGG: bha:BH3859 NADH dehydrogenase
YP_003245698.1	KEGG: pth:PTH_0774 hypothetical protein
YP_003245699.1	PFAM: nitroreductase; KEGG: lsp:Bsph_3105 putative NAD(P)H nitroreductase 12C
YP_003245700.1	PFAM: helix-turn-helix HxlR type; KEGG: lsp:Bsph_3104 putative HTH-type transcriptional regulator
YP_003245701.1	KEGG: bbe:BBR47_57100 hypothetical protein
YP_003245702.1	KEGG: bbe:BBR47_57110 hypothetical protein
YP_003245703.1	KEGG: bbe:BBR47_57120 hypothetical protein
YP_003245704.1	PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: bbe:BBR47_57130 hypothetical membrane protein
YP_003245705.1	KEGG: bbe:BBR47_57140 hypothetical protein
YP_003245706.1	KEGG: bbe:BBR47_57150 hypothetical protein
YP_003245708.1	PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: bbe:BBR47_57160 hypothetical protein
YP_003245710.1	KEGG: bbe:BBR47_57170 hypothetical protein
YP_003245711.1	KEGG: bbe:BBR47_57180 hypothetical protein
YP_003245712.1	TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; KEGG: pjd:Pjdr2_5628 glucosamine/fructose-6-phosphate aminotransferase, isomerizing
YP_003245713.1	KEGG: pjd:Pjdr2_5629 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II
YP_003245714.1	PFAM: YbbR family protein; KEGG: pjd:Pjdr2_5630 YbbR family protein
YP_003245715.1	PFAM: protein of unknown function DUF147; KEGG: pjd:Pjdr2_5631 protein of unknown function DUF147
YP_003245716.1	KEGG: pjd:Pjdr2_5632 putative transmembrane anti-sigma factor
YP_003245717.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: this protein is involved in detoxification and protection against antimicrobial
YP_003245718.1	PFAM: phosphoenolpyruvate carboxylase; KEGG: pjd:Pjdr2_5636 phosphoenolpyruvate carboxylase
YP_003245719.1	KEGG: pjd:Pjdr2_5639 hypothetical protein
YP_003245720.1	PFAM: protein of unknown function DUF95 transmembrane; KEGG: pjd:Pjdr2_5640 protein of unknown function DUF95 transmembrane
YP_003245721.1	TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase; KEGG: pjd:Pjdr2_5641 polysaccharide deacetylase family sporulation protein PdaB
YP_003245722.1	KEGG: gka:GK0147 KinB signaling pathway activation protein
YP_003245723.1	KEGG: pjd:Pjdr2_5643 spore germination protein
YP_003245724.1	PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; KEGG: pjd:Pjdr2_5644 ATP-binding Mrp/Nbp35 family protein
YP_003245725.1	KEGG: pjd:Pjdr2_5645 N-acetylmuramoyl-L-alanine amidase CwlD; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin
YP_003245726.1	KEGG: gwc:GWCH70_0412 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase
YP_003245727.1	KEGG: pjd:Pjdr2_5647 adenylylsulfate reductase, thioredoxin dependent; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase
YP_003245728.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bbe:BBR47_07640 putative multidrug resistance protein
YP_003245729.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pjd:Pjdr2_0857 transcriptional regulator, MarR family
YP_003245730.1	PFAM: ribosomal protein S9; KEGG: pjd:Pjdr2_5648 ribosomal protein S9
YP_003245731.1	TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: pjd:Pjdr2_5649 ribosomal protein L13
YP_003245732.1	KEGG: pjd:Pjdr2_5650 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain
YP_003245733.1	TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: pjd:Pjdr2_5651 ribosomal protein L17
YP_003245734.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_003245736.1	TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; KEGG: pjd:Pjdr2_5654 ribosomal protein S13
YP_003245737.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_003245738.1	TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: pjd:Pjdr2_5656 translation initiation factor IF-1
YP_003245739.1	SMART: KOW domain protein; KEGG: pjd:Pjdr2_5657 hypothetical protein
YP_003245740.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_003245741.1	TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: pjd:Pjdr2_5659 adenylate kinase
YP_003245742.1	TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: pjd:Pjdr2_5660 preprotein translocase, SecY subunit
YP_003245743.1	TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: pjd:Pjdr2_5661 ribosomal protein L15
YP_003245744.1	TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: bld:BLi00151 50S ribosomal protein L30
YP_003245745.1	TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; KEGG: pjd:Pjdr2_5663 ribosomal protein S5
YP_003245746.1	TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: pjd:Pjdr2_5664 ribosomal protein L18
YP_003245747.1	TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; KEGG: pjd:Pjdr2_5665 ribosomal protein L6
YP_003245748.1	PFAM: ribosomal protein S8; KEGG: pjd:Pjdr2_5666 ribosomal protein S8
YP_003245749.1	PFAM: ribosomal protein S14; KEGG: pjd:Pjdr2_5667 ribosomal protein S14
YP_003245750.1	PFAM: ribosomal protein L5; KEGG: pjd:Pjdr2_5668 ribosomal protein L5
YP_003245751.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_003245752.1	TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: pjd:Pjdr2_5670 ribosomal protein L14
YP_003245753.1	TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; KEGG: pjd:Pjdr2_5671 ribosomal protein S17
YP_003245754.1	TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: bha:BH0142 50S ribosomal protein L29
YP_003245755.1	TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; KEGG: pjd:Pjdr2_5673 ribosomal protein L16
YP_003245756.1	KEGG: pjd:Pjdr2_5674 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein
YP_003245757.1	TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: pjd:Pjdr2_5675 ribosomal protein L22
YP_003245758.1	TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: pjd:Pjdr2_5676 ribosomal protein S19
YP_003245759.1	TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: pjd:Pjdr2_5677 ribosomal protein L2
YP_003245760.1	PFAM: Ribosomal protein L25/L23; KEGG: pjd:Pjdr2_5678 ribosomal protein L25/L23
YP_003245761.1	PFAM: ribosomal protein L4/L1e; KEGG: pjd:Pjdr2_5679 ribosomal protein L4/L1e
YP_003245762.1	TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; KEGG: pjd:Pjdr2_5680 ribosomal protein L3
YP_003245763.1	TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: pjd:Pjdr2_5681 ribosomal protein S10
YP_003245764.1	TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: pjd:Pjdr2_5685 translation elongation factor Tu
YP_003245765.1	TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: pjd:Pjdr2_5686 translation elongation factor G
YP_003245766.1	TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: pjd:Pjdr2_5687 ribosomal protein S7
YP_003245767.1	TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: pjd:Pjdr2_5688 ribosomal protein S12
YP_003245768.1	KEGG: bsu:BSU01090 putative ribosomal protein L7Ae-like
YP_003245769.1	KEGG: pjd:Pjdr2_5690 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein
YP_003245770.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_003245771.1	PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: pjd:Pjdr2_5692 methyltransferase small
YP_003245772.1	TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: pjd:Pjdr2_5693 ribosomal protein L7/L12
YP_003245773.1	PFAM: ribosomal protein L10; KEGG: pjd:Pjdr2_5694 ribosomal protein L10
YP_003245774.1	KEGG: lsp:Bsph_4635 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11
YP_003245775.1	KEGG: pjd:Pjdr2_5697 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; SMART: NGN domain protein
YP_003245776.1	TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: pjd:Pjdr2_5698 preprotein translocase, SecE subunit
YP_003245777.1	TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: pjd:Pjdr2_5699 ribosomal protein L33
YP_003245778.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
YP_003245779.1	PFAM: protein of unknown function DUF901; KEGG: pjd:Pjdr2_5701 protein of unknown function DUF901
YP_003245780.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: pjd:Pjdr2_5702 RNA methyltransferase, TrmH family, group 3
YP_003245781.1	PFAM: ribonuclease III; KEGG: pjd:Pjdr2_5703 ribonuclease III
YP_003245782.1	KEGG: pjd:Pjdr2_5704 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M)
YP_003245783.1	TIGRFAM: serine O-acetyltransferase; KEGG: pjd:Pjdr2_5705 serine O-acetyltransferase
YP_003245784.1	TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: bsu:BSU00920 glutamyl-tRNA synthetase
YP_003245785.1	KEGG: pjd:Pjdr2_5707 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase
YP_003245786.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: pjd:Pjdr2_5708 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_003245787.1	PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: pjd:Pjdr2_5709 PilT protein domain protein
YP_003245788.1	KEGG: pjd:Pjdr2_5710 hypothetical protein
YP_003245789.1	KEGG: pjd:Pjdr2_5711 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_003245790.1	non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair
YP_003245791.1	TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5713 DNA repair protein RadA
YP_003245792.1	PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5715 ATPase AAA-2 domain protein
YP_003245793.1	PFAM: ATP:guanido phosphotransferase; KEGG: pjd:Pjdr2_5716 ATP:guanido phosphotransferase
YP_003245794.1	PFAM: UvrB/UvrC protein; KEGG: pjd:Pjdr2_5717 UvrB/UvrC protein
YP_003245795.1	PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: pjd:Pjdr2_5718 transcriptional repressor, CtsR
YP_003245796.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: bca:BCE_4999 GntR family transcriptional regulator
YP_003245797.1	PFAM: PfkB domain protein; KEGG: bai:BAA_5110 carbohydrate kinase, PfkB family
YP_003245798.1	PFAM: protein of unknown function DUF1341; KEGG: pjd:Pjdr2_0941 protein of unknown function DUF1341
YP_003245799.1	TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: Pyridoxal phosphate-dependent transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pjd:Pjdr2_0940 pyridoxal phosphate-dependent enzyme
YP_003245800.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_003245801.1	KEGG: pjd:Pjdr2_3928 hypothetical protein
YP_003245802.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_3929 ABC transporter related
YP_003245803.1	PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_3930 transcriptional regulator, GntR family
YP_003245804.1	KEGG: pjd:Pjdr2_3931 hypothetical protein
YP_003245805.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_3932 ABC transporter related
YP_003245806.1	PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU07320 hypothetical protein
YP_003245807.1	KEGG: bwe:BcerKBAB4_3984 hypothetical protein
YP_003245808.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; S-layer domain protein; KEGG: mcl:MCCL_1493 hypothetical protein
YP_003245810.1	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB
YP_003245811.1	TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: pjd:Pjdr2_5720 ATP-dependent DNA helicase PcrA
YP_003245812.1	KEGG: pjd:Pjdr2_5721 geranylgeranylglyceryl phosphate synthase family protein; TIGRFAM: geranylgeranylglyceryl phosphate synthase family protein; PFAM: PcrB family protein
YP_003245813.1	KEGG: hde:HDEF_2165 hypothetical protein
YP_003245814.1	PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: gau:GAU_3119 putative methyltransferase
YP_003245815.1	KEGG: aac:Aaci_0272 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_003245816.1	PFAM: glycosyl transferase family 2; KEGG: cbe:Cbei_4758 glycosyl transferase family protein
YP_003245817.1	TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; Male sterility domain; polysaccharide biosynthesis protein CapD; NAD-dependent epimerase/dehydratase; KEGG: pjd:Pjdr2_4987 dTDP-4-dehydrorhamnose reductase
YP_003245818.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: pjd:Pjdr2_4988 dTDP-glucose 4,6-dehydratase
YP_003245819.1	KEGG: bcl:ABC3690 dTDP-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_003245820.1	PFAM: Nucleotidyl transferase; KEGG: bwe:BcerKBAB4_1122 nucleotidyl transferase
YP_003245821.1	PFAM: GtrA family protein; KEGG: ppf:Pput_3931 GtrA family protein
YP_003245822.1	PFAM: glycosyl transferase family 2; KEGG: dsa:Desal_3609 glycosyl transferase family 2
YP_003245823.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: fph:Fphi_1260 DegT/DnrJ/EryC1/StrS aminotransferase
YP_003245824.1	KEGG: gbm:Gbem_1609 WxcM domain protein
YP_003245825.1	PFAM: WxcM domain protein; KEGG: sbn:Sbal195_3028 WxcM domain-containing protein
YP_003245826.1	KEGG: mpl:Mpal_2176 hypothetical protein
YP_003245827.1	PFAM: glycosyl transferase family 2; Methyltransferase type 11; Methionine biosynthesis MetW protein; Methyltransferase type 12; KEGG: cbk:CLL_A3246 WsaE
YP_003245828.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbk:CLL_A3247 O-antigen export system ATP-binding protein RfbB
YP_003245829.1	PFAM: ABC-2 type transporter; KEGG: kpn:KPN_02486 O-antigen export - TMD component
YP_003245830.1	PFAM: O-antigen polymerase; KEGG: pth:PTH_2583 hypothetical protein
YP_003245831.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pjd:Pjdr2_1220 UTP-glucose-1-phosphate uridylyltransferase
YP_003245832.1	PFAM: acyltransferase 3; KEGG: ckr:CKR_3200 hypothetical protein
YP_003245833.1	PFAM: peptidase U32; KEGG: pjd:Pjdr2_5722 peptidase U32
YP_003245834.1	KEGG: lsp:Bsph_3176 hypothetical protein
YP_003245835.1	PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: aac:Aaci_2319 major facilitator superfamily MFS_1
YP_003245836.1	TIGRFAM: small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor G domain IV; KEGG: pjd:Pjdr2_6128 small GTP-binding protein
YP_003245837.1	PFAM: copper amine oxidase domain protein; KEGG: pjd:Pjdr2_5723 copper amine oxidase domain protein
YP_003245838.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: pjd:Pjdr2_5724 peptidase S1 and S6 chymotrypsin/Hap
YP_003245839.1	KEGG: pjd:Pjdr2_5727 hypothetical protein
YP_003245840.1	PFAM: S-layer domain protein; SMART: Fibronectin type III domain protein; KEGG: cce:Ccel_1376 S-layer domain protein
YP_003245841.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: pjd:Pjdr2_5728 excinuclease ABC, A subunit
YP_003245842.1	KEGG: pjd:Pjdr2_5729 excinuclease ABC, B subunit; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein
YP_003245843.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dae:Dtox_0653 MotA/TolQ/ExbB proton channel
YP_003245844.1	PFAM: OmpA/MotB domain protein; KEGG: bha:BH3239 flagellar motor protein MotS
YP_003245845.1	PFAM: ABC-2 type transporter; KEGG: pjd:Pjdr2_4235 ABC-2 type transporter
YP_003245846.1	PFAM: ABC-2 type transporter; KEGG: bcy:Bcer98_0216 ABC-2 type transporter
YP_003245847.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpd:Teth39_0193 ABC transporter related
YP_003245848.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: cac:CAC2940 membrane-associated sensory histidine kinase-like ATPase
YP_003245849.1	PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: cac:CAC0240 response regulator
YP_003245850.1	KEGG: pjd:Pjdr2_5730 cell division topological determinant
YP_003245851.1	KEGG: pjd:Pjdr2_5731 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; Peptidoglycan-binding domain 1 protein; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein
YP_003245852.1	PFAM: Peptidase M23; KEGG: pjd:Pjdr2_5732 peptidase M23
YP_003245853.1	PFAM: protein of unknown function DUF214; KEGG: pjd:Pjdr2_5733 protein of unknown function DUF214
YP_003245854.1	KEGG: pjd:Pjdr2_5734 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003245855.1	PFAM: VanW family protein; G5 domain protein; KEGG: pjd:Pjdr2_5735 VanW family protein
YP_003245856.1	KEGG: bld:BLi00959 YhbE
YP_003245857.1	KEGG: gtn:GTNG_1989 hypothetical protein
YP_003245858.1	PFAM: putative esterase; KEGG: saq:Sare_2723 putative esterase
YP_003245859.1	TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: pjd:Pjdr2_5737 argininosuccinate lyase
YP_003245860.1	KEGG: pjd:Pjdr2_5738 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase
YP_003245861.1	KEGG: pjd:Pjdr2_5739 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain
YP_003245862.1	TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: pjd:Pjdr2_5740 acetylornithine and succinylornithine aminotransferase
YP_003245863.1	TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: pjd:Pjdr2_5741 acetylglutamate kinase
YP_003245864.1	KEGG: pjd:Pjdr2_5742 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ
YP_003245865.1	KEGG: pjd:Pjdr2_5743 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_003245866.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH0837 hypothetical protein
YP_003245868.1	PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: pjd:Pjdr2_5744 protein of unknown function DUF161
YP_003245869.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: pjd:Pjdr2_5745 hypothetical protein
YP_003245870.1	TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; KEGG: pjd:Pjdr2_5746 preprotein translocase, SecA subunit
YP_003245871.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: pjd:Pjdr2_5747 sigma 54 modulation protein/ribosomal protein S30EA
YP_003245872.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pjd:Pjdr2_5748 cold-shock DNA-binding domain protein
YP_003245874.1	PFAM: glycosyl transferase family 2; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: afl:Aflv_2575 glycosyl transferase fused to TPR repeats
YP_003245875.1	PFAM: von Willebrand factor type A; cell surface receptor IPT/TIG domain protein; SMART: von Willebrand factor type A; cell surface receptor IPT/TIG domain protein; KEGG: bbe:BBR47_49720 hypothetical protein
YP_003245876.1	KEGG: sfu:Sfum_1631 hypothetical protein
YP_003245877.1	TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: lsp:Bsph_1174 flagellar protein
YP_003245878.1	KEGG: cce:Ccel_0104 flagellar protein FlaG protein
YP_003245879.1	PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: pth:PTH_2096 flagellar capping protein
YP_003245880.1	PFAM: flagellin domain protein; KEGG: bbe:BBR47_53350 flagellin
YP_003245881.1	TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; KEGG: cbe:Cbei_4295 carbon storage regulator, CsrA
YP_003245882.1	PFAM: protein of unknown function DUF180; KEGG: cno:NT01CX_1874 flagellar assembly protein FliW
YP_003245883.1	KEGG: bsu:BSU35390 hypothetical protein
YP_003245884.1	TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: pjd:Pjdr2_5763 flagellar hook-associated protein 3
YP_003245885.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: pjd:Pjdr2_5764 flagellar hook-associated protein FlgK
YP_003245886.1	PFAM: FlgN family protein; KEGG: lsp:Bsph_1150 hypothetical protein
YP_003245887.1	PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: pjd:Pjdr2_5766 anti-sigma-28 factor, FlgM
YP_003245888.1	KEGG: pjd:Pjdr2_5767 flagellar protein
YP_003245889.1	KEGG: pjd:Pjdr2_5768 amidophosphoribosyltransferase-like protein
YP_003245891.1	PFAM: helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: pjd:Pjdr2_5769 helicase domain protein
YP_003245892.1	KEGG: pjd:Pjdr2_5770 hypothetical protein
YP_003245893.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: pjd:Pjdr2_5772 two component transcriptional regulator, LuxR family
YP_003245894.1	KEGG: pjd:Pjdr2_5773 histidine kinase; PFAM: Sensor DegS domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein
YP_003245895.1	PFAM: copper amine oxidase domain protein; KEGG: pjd:Pjdr2_5774 copper amine oxidase domain protein
YP_003245896.1	KEGG: pjd:Pjdr2_5777 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase
YP_003245897.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: pjd:Pjdr2_5778 small acid-soluble spore protein alpha/beta type
YP_003245898.1	KEGG: pjd:Pjdr2_5779 hypothetical protein
YP_003245899.1	PFAM: S-layer domain protein; KEGG: lsp:Bsph_1041 putative S-layer protein/N-acetylmuramoyl-L-alanine amidase
YP_003245901.1	PFAM: S-layer domain protein; KEGG: bbe:BBR47_54190 hypothetical protein
YP_003245902.1	PFAM: Glycosyl transferase, family 4, conserved region; KEGG: pjd:Pjdr2_5783 glycosyl transferase family 4
YP_003245903.1	KEGG: pjd:Pjdr2_5784 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF
YP_003245904.1	TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: polysaccharide pyruvyl transferase; KEGG: pjd:Pjdr2_5785 polysaccharide pyruvyl transferase
YP_003245905.1	KEGG: pjd:Pjdr2_5786 hypothetical protein
YP_003245906.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: pjd:Pjdr2_5787 glucose-1,6-bisphosphate synthase
YP_003245907.1	TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: pjd:Pjdr2_5788 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
YP_003245908.1	KEGG: pjd:Pjdr2_5790 hypothetical protein
YP_003245909.1	TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: pjd:Pjdr2_5791 protein of unknown function DUF1078 domain protein
YP_003245910.1	TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: pjd:Pjdr2_5792 flagellar basal body rod protein
YP_003245911.1	TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: pjd:Pjdr2_5793 cell shape determining protein, MreB/Mrl family
YP_003245912.1	TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: pjd:Pjdr2_5794 sporulation transcriptional regulator SpoIIID
YP_003245913.1	PFAM: Peptidase M23; KEGG: pjd:Pjdr2_5795 peptidase M23
YP_003245914.1	TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: pjd:Pjdr2_5796 stage II sporulation protein D
YP_003245915.1	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: pjd:Pjdr2_5800 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_003245916.1	TIGRFAM: conserved hypothetical protein; PFAM: conserved hypothetical protein; KEGG: bcl:ABC3849 hypothetical protein
YP_003245917.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_003245918.1	KEGG: pjd:Pjdr2_5818 ATP synthase F1, beta subunit; TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase
YP_003245919.1	TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: pjd:Pjdr2_5819 ATP synthase F1, gamma subunit
YP_003245920.1	KEGG: pjd:Pjdr2_5820 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; HerA-ATP synthase, barrel domain; H+transporting two-sector ATPase alpha/beta subunit domain protein
YP_003245921.1	TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: pjd:Pjdr2_5821 ATP synthase F1, delta subunit
YP_003245922.1	TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: pjd:Pjdr2_5822 ATP synthase F0, B subunit
YP_003245923.1	TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: lsp:Bsph_1011 F0F1 ATP synthase subunit C
YP_003245924.1	TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: pjd:Pjdr2_5824 ATP synthase F0, A subunit
YP_003245925.1	PFAM: ATP synthase I; KEGG: pjd:Pjdr2_5825 ATP synthase I
YP_003245926.1	KEGG: det:DET0557 hypothetical protein
YP_003245927.1	KEGG: pjd:Pjdr2_5827 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_003245928.1	KEGG: pjd:Pjdr2_5828 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_003245929.1	PFAM: glycine hydroxymethyltransferase; aminotransferase class I and II; KEGG: pjd:Pjdr2_5834 glycine hydroxymethyltransferase
YP_003245930.1	PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_5835 hypothetical protein
YP_003245931.1	KEGG: pjd:Pjdr2_5836 sugar-phosphate isomerase, RpiB/LacA/LacB family; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase
YP_003245932.1	PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: pjd:Pjdr2_5837 protein tyrosine phosphatase
YP_003245933.1	PFAM: protein of unknown function DUF204; KEGG: pjd:Pjdr2_5838 protein of unknown function DUF204
YP_003245934.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: pjd:Pjdr2_5839 SUA5/YciO/YrdC/YwlC family protein
YP_003245935.1	TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R; KEGG: pjd:Pjdr2_5840 stage II sporulation protein R
YP_003245936.1	PFAM: cell cycle protein; KEGG: pjd:Pjdr2_4417 cell cycle protein
YP_003245937.1	PFAM: cell cycle protein; KEGG: pjd:Pjdr2_4417 cell cycle protein
YP_003245938.1	TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small; KEGG: pjd:Pjdr2_5841 modification methylase, HemK family
YP_003245939.1	TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: pjd:Pjdr2_5842 peptide chain release factor 1
YP_003245940.1	TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related; KEGG: pjd:Pjdr2_5845 GTP-binding protein YchF
YP_003245941.1	catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate
YP_003245942.1	KEGG: amt:Amet_1624 hypothetical protein
YP_003245943.1	catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol)
YP_003245944.1	PFAM: regulatory protein TetR; KEGG: esi:Exig_1440 TetR family transcriptional regulator
YP_003245945.1	PFAM: small multidrug resistance protein; KEGG: lsp:Bsph_1744 multidrug resistance protein
YP_003245946.1	PFAM: small multidrug resistance protein; KEGG: bld:BLi01410 YkkD
YP_003245947.1	PFAM: regulatory protein TetR; KEGG: bay:RBAM_007100 YerO
YP_003245948.1	PFAM: acriflavin resistance protein; KEGG: bcg:BCG9842_B5389 transporter, AcrB/AcrD/AcrF family
YP_003245949.1	KEGG: dhd:Dhaf_1635 cytoplasmic chaperone TorD family protein
YP_003245950.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_003245951.1	KEGG: gem:GM21_1958 formate dehydrogenase family accessory protein FdhD
YP_003245952.1	PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: pjd:Pjdr2_4721 major facilitator superfamily MFS_1
YP_003245953.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003245954.1	PFAM: Protein of unknown function DUF2164; KEGG: bbe:BBR47_16790 hypothetical protein
YP_003245955.1	PFAM: GCN5-related N-acetyltransferase; KEGG: amt:Amet_1423 GCN5-related N-acetyltransferase
YP_003245956.1	PFAM: MOSC domain containing protein; KEGG: bbe:BBR47_28090 hypothetical protein
YP_003245957.1	PFAM: GCN5-related N-acetyltransferase; KEGG: lin:lin2246 hypothetical protein
YP_003245958.1	KEGG: pjd:Pjdr2_0566 hypothetical protein
YP_003245959.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: pjd:Pjdr2_0317 glycoside hydrolase family 3 domain protein
YP_003245960.1	PFAM: putative esterase; KEGG: saq:Sare_2723 putative esterase
YP_003245961.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: cag:Cagg_0081 transcriptional regulator, LacI family
YP_003245962.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lwe:lwe1749 ABC transporter permease protein
YP_003245963.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lmc:Lm4b_01745 sugar ABC transporter, permease protein
YP_003245964.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_0565 extracellular solute-binding protein family 1
YP_003245965.1	PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_2920 major facilitator superfamily MFS_1
YP_003245966.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_4380 histidine kinase
YP_003245967.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: pjd:Pjdr2_4734 two component transcriptional regulator, AraC family
YP_003245968.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_4382 extracellular solute-binding protein family 1
YP_003245969.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4383 binding-protein-dependent transport systems inner membrane component
YP_003245970.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_4384 binding-protein-dependent transport systems inner membrane component
YP_003245971.1	PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: gtn:GTNG_1579 formate dehydrogenase
YP_003245972.1	KEGG: bcx:BCA_1954 hypothetical protein
YP_003245973.1	TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; KEGG: bay:RBAM_024300 YrhG
YP_003245974.1	PFAM: major facilitator superfamily MFS_1; KEGG: bcg:BCG9842_B4868 major facilitator family transporter
YP_003245975.1	PFAM: Tetracycline transcriptional regulator QacR-related domain protein; regulatory protein TetR; KEGG: bca:BCE_0503 TetR family transcriptional regulator
YP_003245976.1	KEGG: bcl:ABC0654 hypothetical protein
YP_003245977.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: pjd:Pjdr2_2160 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_003245978.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: hsl:OE6249F hypothetical protein
YP_003245979.1	PFAM: glutathione peroxidase; KEGG: gka:GK1785 glutathione peroxidase
YP_003245982.1	KEGG: bay:RBAM_007880 YflH
YP_003245983.1	PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: aoe:Clos_2340 DEAD/DEAH box helicase domain-containing protein
YP_003245985.1	PFAM: ABC-1 domain protein; KEGG: gwc:GWCH70_1612 ABC-1 domain protein
YP_003245986.1	KEGG: dhd:Dhaf_3248 hypothetical protein
YP_003245987.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: bpu:BPUM_1222 hypothetical protein
YP_003245988.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: oih:OB0596 hypothetical protein
YP_003245989.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bha:BH0373 two-component sensor histidine kinase
YP_003245990.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bsu:BSU13250 hypothetical protein
YP_003245991.1	KEGG: sgr:SGR_5090 hypothetical protein
YP_003245992.1	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis
YP_003245993.1	PFAM: Catalase related subgroup; Catalase domain protein; KEGG: bcy:Bcer98_0874 catalase
YP_003245994.1	PFAM: transcriptional regulator domain protein; KEGG: pjd:Pjdr2_5887 putative two component transcriptional regulator, winged helix family
YP_003245995.1	PFAM: ferric-uptake regulator; KEGG: pjd:Pjdr2_5888 ferric uptake regulator, Fur family
YP_003245996.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bbe:BBR47_00150 D-alanyl-D-alanine carboxypeptidase precursor
YP_003245997.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcg:BCG9842_B2796 DNA-binding response regulator
YP_003245998.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: pjd:Pjdr2_5607 histidine kinase
YP_003245999.1	KEGG: aoe:Clos_0616 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; 5TM Receptors of the LytS-YhcK type transmembrane region; SMART: GGDEF domain containing protein
YP_003246000.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_2776 aldo/keto reductase
YP_003246001.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: aac:Aaci_1963 germination protein, Ger(X)C family
YP_003246002.1	KEGG: cce:Ccel_1970 spore germination protein
YP_003246003.1	PFAM: GerA spore germination protein; KEGG: tte:TTE2555 hypothetical protein
YP_003246004.1	PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: bca:BCE_0465 Rieske 2Fe-2S iron-sulfur protein, putative
YP_003246006.1	PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: bsu:BSU24000 multidrug resistance protein
YP_003246007.1	PFAM: transposase IS200-family protein; KEGG: dsy:DSY1392 hypothetical protein
YP_003246008.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2053 ABC transporter transmembrane region
YP_003246009.1	PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pjd:Pjdr2_2052 ABC transporter related
YP_003246010.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: hypothetical protein
YP_003246011.1	PFAM: GTPase EngC; KEGG: pjd:Pjdr2_4486 ribosome small subunit-dependent GTPase A
YP_003246012.1	PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; KEGG: pjd:Pjdr2_3184 DEAD_2 domain protein
YP_003246014.1	TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase; KEGG: bbe:BBR47_36900 putative polysaccharide deacetylase precursor
YP_003246015.1	PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: pjd:Pjdr2_5119 oxidoreductase domain protein
YP_003246016.1	PFAM: Catalase related subgroup; Catalase domain protein; KEGG: bld:BLi04111 KatX
YP_003246017.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpu:BPUM_3485 transcriptional regulator
YP_003246018.1	PFAM: LrgA family protein; KEGG: bld:BLi04057 holin-like protein
YP_003246019.1	PFAM: LrgB family protein; KEGG: bpu:BPUM_3487 murein hydrolase LrgB
YP_003246020.1	PFAM: sulfatase; KEGG: pjd:Pjdr2_5894 sulfatase
YP_003246022.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: pjd:Pjdr2_6267 protein of unknown function DUF21
YP_003246023.1	KEGG: yen:YE2678 putative phosphotransferase system component
YP_003246027.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_003246028.1	PFAM: protein of unknown function UCP012608; KEGG: btl:BALH_2658 hypothetical protein
YP_003246029.1	KEGG: lmc:Lm4b_02689 ABC transporter (ATP-binding protein) required for expression of cytochrome BD; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003246030.1	KEGG: bpu:BPUM_3517 ABC transporter ATP-binding protein; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; SMART: AAA ATPase
YP_003246031.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bld:BLi04133 CydB
YP_003246032.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bbe:BBR47_45980 cytochrome d ubiquinol oxidase subunit I
YP_003246033.1	KEGG: dae:Dtox_3359 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase
YP_003246034.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: tcx:Tcr_1013 NAD(P)H dehydrogenase (quinone)
YP_003246035.1	PFAM: regulatory protein TetR; KEGG: ccs:CCNA_01931 transcriptional regulator, TetR family
YP_003246036.1	PFAM: major facilitator superfamily MFS_1; KEGG: aac:Aaci_2906 major facilitator superfamily MFS_1
YP_003246037.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bbe:BBR47_58810 two-component sensor histidine kinase
YP_003246038.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bbe:BBR47_58820 two-component response regulator
YP_003246039.1	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: bbe:BBR47_14550 hypothetical protein
YP_003246040.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pjd:Pjdr2_5714 antibiotic biosynthesis monooxygenase
YP_003246042.1	KEGG: dhd:Dhaf_0780 hypothetical protein
YP_003246043.1	PFAM: Domain of unknown function DUF1801; KEGG: pjd:Pjdr2_0938 domain of unknown function DUF1801
YP_003246044.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: pjd:Pjdr2_1871 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003246045.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pjd:Pjdr2_5524 putative RNA polymerase, sigma-24 subunit, ECF subfamily
YP_003246046.1	PFAM: YCII-related; KEGG: pjd:Pjdr2_5525 YCII-related
YP_003246047.1	PFAM: protein of unknown function DUF1470; KEGG: ami:Amir_4291 protein of unknown function DUF1470
YP_003246048.1	PFAM: Epoxide hydrolase domain protein; KEGG: cac:CAC0719 epoxide hydrolase
YP_003246049.1	KEGG: lsp:Bsph_3077 hypothetical protein
YP_003246050.1	TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bbe:BBR47_17210 probable cysteine synthase
YP_003246051.1	PFAM: biotin/lipoate A/B protein ligase; KEGG: pjd:Pjdr2_5950 biotin/lipoate A/B protein ligase
YP_003246052.1	KEGG: bsu:BSU10660 hypothetical protein
YP_003246053.1	PFAM: protein of unknown function DUF839; KEGG: lic:LIC20047 hypothetical protein
YP_003246054.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bld:BLi00282 TatAD
YP_003246055.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bld:BLi00283 TatCD
YP_003246056.1	PFAM: Amidase; KEGG: scl:sce6000 amidase family protein
YP_003246057.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_1485 transcriptional regulator, AraC family
YP_003246058.1	KEGG: pjd:Pjdr2_1490 chitinase; PFAM: glycoside hydrolase family 18; SMART: chitinase II
YP_003246059.1	PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pjd:Pjdr2_1489 transglutaminase domain protein
YP_003246060.1	KEGG: pjd:Pjdr2_1488 hypothetical protein
YP_003246061.1	PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: pjd:Pjdr2_1487 alpha-L-fucosidase
YP_003246062.1	PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: pjd:Pjdr2_1486 alpha-L-fucosidase
YP_003246063.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1484 extracellular solute-binding protein family 1
YP_003246064.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1483 binding-protein-dependent transport systems inner membrane component
YP_003246065.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1482 binding-protein-dependent transport systems inner membrane component
YP_003246066.1	KEGG: pjd:Pjdr2_1490 chitinase; PFAM: glycoside hydrolase family 18; SMART: chitinase II
YP_003246067.1	PFAM: protein of unknown function DUF378; KEGG: ppe:PEPE_0898 hypothetical protein
YP_003246068.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbe:BBR47_56310 transcriptional regulator
YP_003246069.1	PFAM: Uncharacterised protein family UPF0324; KEGG: bbe:BBR47_56320 hypothetical protein
YP_003246070.1	converts 1,4-alpha-D-glucans to maltodextrin
YP_003246071.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_16950 putative ABC transporter permease protein
YP_003246072.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aoe:Clos_2160 binding-protein-dependent transport systems inner membrane component
YP_003246073.1	PFAM: glutathione peroxidase; KEGG: pjd:Pjdr2_5965 peroxiredoxin
YP_003246074.1	PFAM: protein of unknown function DUF1680; KEGG: pjd:Pjdr2_2459 protein of unknown function DUF1680
YP_003246075.1	PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_0484 transcriptional regulator, AraC family
YP_003246077.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: dhd:Dhaf_3115 3-demethylubiquinone-9 3-methyltransferase
YP_003246078.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ssp:SSP2177 hypothetical protein
YP_003246079.1	PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: mxa:MXAN_6215 ArsR family transcriptional regulator
YP_003246080.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pjd:Pjdr2_0327 haloacid dehalogenase domain protein hydrolase
YP_003246081.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aac:Aaci_2174 methyltransferase type 11
YP_003246082.1	PFAM: sugar diacid recognition domain protein; KEGG: cbe:Cbei_4476 transcriptional regulator, CdaR
YP_003246083.1	KEGG: cbe:Cbei_4479 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase
YP_003246084.1	PFAM: Gluconate transporter; Citrate transporter; KEGG: cbe:Cbei_4480 gluconate transporter
YP_003246085.1	TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bbe:BBR47_21810 hypothetical protein
YP_003246086.1	TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bbe:BBR47_21800 hypothetical protein
YP_003246087.1	PFAM: protein of unknown function DUF485; KEGG: gka:GK0929 hypothetical protein
YP_003246088.1	PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: bbe:BBR47_21780 two-component response regulator
YP_003246089.1	KEGG: bbe:BBR47_21770 two-component sensor histidine kinase; PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_003246090.1	KEGG: pjd:Pjdr2_5954 hypothetical protein
YP_003246091.1	PFAM: protein of unknown function DUF1212; KEGG: pjd:Pjdr2_5955 protein of unknown function DUF1212
YP_003246092.1	PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_5885 aldo/keto reductase
YP_003246093.1	PFAM: transcriptional regulator PadR family protein; KEGG: sth:STH2076 putative transcriptional regulator
YP_003246094.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2075 ABC transporter ATP-binding protein
YP_003246095.1	PFAM: ABC-2 type transporter; KEGG: cth:Cthe_1667 ABC-2 type transporter
YP_003246096.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003246097.1	TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: bay:RBAM_031340 YvbT
YP_003246098.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: lsp:Bsph_1865 levodione reductase
YP_003246099.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pjd:Pjdr2_5377 short-chain dehydrogenase/reductase SDR
YP_003246100.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gwc:GWCH70_2639 transcriptional regulator, MarR family
YP_003246101.1	PFAM: Integrase catalytic region; KEGG: bay:RBAM_036580 transposases lmo0828-like protein
YP_003246102.1	KEGG: bpu:BPUM_1949 transposase
YP_003246103.1	PFAM: nitrite and sulphite reductase 4Fe-4S region; KEGG: bbe:BBR47_22700 probable transcriptional regulator
YP_003246104.1	TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: lsp:Bsph_0029 copper-transporting P-type ATPase CopA
YP_003246105.1	TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: pjd:Pjdr2_5323 copper ion binding protein
YP_003246106.1	PFAM: protein of unknown function DUF156; KEGG: pjd:Pjdr2_5324 protein of unknown function DUF156
YP_003246107.1	PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; glycoside hydrolase family 67; KEGG: bha:BH1061 alpha-glucuronidase
YP_003246108.1	KEGG: pjd:Pjdr2_4260 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10
YP_003246109.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1322 binding-protein-dependent transport systems inner membrane component
YP_003246110.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_1321 binding-protein-dependent transport systems inner membrane component
YP_003246111.1	PFAM: extracellular solute-binding protein family 1; KEGG: pjd:Pjdr2_1320 extracellular solute-binding protein family 1
YP_003246112.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: bha:BH2110 hypothetical protein
YP_003246113.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: bha:BH2109 hypothetical protein
YP_003246114.1	PFAM: Glucuronate isomerase; KEGG: bcl:ABC0995 glucuronate isomerase
YP_003246115.1	PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bld:BLi01354 hypothetical protein
YP_003246116.1	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate
YP_003246117.1	Converts D-mannonate to D-mannuronate
YP_003246118.1	PFAM: glycoside hydrolase family 4; KEGG: pjd:Pjdr2_0850 glycoside hydrolase family 4
YP_003246119.1	PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: pjd:Pjdr2_0849 ATPase BadF/BadG/BcrA/BcrD type
YP_003246120.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_0848 transcriptional regulator, AraC family
YP_003246121.1	TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: pjd:Pjdr2_2507 branched-chain amino acid aminotransferase
YP_003246122.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_2508 transcriptional regulator, LysR family
YP_003246123.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_5978 acetyltransferase-like protein
YP_003246124.1	KEGG: cpy:Cphy_0676 hypothetical protein
YP_003246125.1	PFAM: aminoglycoside phosphotransferase; KEGG: bld:BLi00298 YcbJ
YP_003246126.1	KEGG: pjd:Pjdr2_1274 hypothetical protein
YP_003246127.1	KEGG: bld:BLi04261 hypothetical protein
YP_003246128.1	KEGG: pjd:Pjdr2_5987 radical SAM enzyme, Cfr family; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_003246129.1	KEGG: bwe:BcerKBAB4_5692 hypothetical protein
YP_003246130.1	PFAM: regulatory protein TetR; KEGG: pjd:Pjdr2_2861 transcriptional regulator, TetR family
YP_003246131.1	PFAM: metallophosphoesterase; KEGG: pjd:Pjdr2_0533 metallophosphoesterase
YP_003246132.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: pjd:Pjdr2_0217 transcriptional regulator, DeoR family
YP_003246133.1	PFAM: small multidrug resistance protein; KEGG: bbe:BBR47_26430 hypothetical protein
YP_003246134.1	KEGG: bbe:BBR47_13330 hypothetical protein
YP_003246135.1	PFAM: isochorismatase hydrolase; KEGG: bcg:BCG9842_B2277 isochorismatase family protein
YP_003246136.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; iron dependent repressor; KEGG: bwe:BcerKBAB4_1806 MarR family transcriptional regulator
YP_003246137.1	PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: sez:Sez_1508 transcriptional repressor AraR-like
YP_003246138.1	TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: efa:EF2217 alpha-1,2-mannosidase, putative
YP_003246139.1	PFAM: GerA spore germination protein; KEGG: bcb:BCB4264_A3138 spore germination protein GerAA
YP_003246140.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bcr:BCAH187_A3166 spore germination protein A2
YP_003246141.1	TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bbe:BBR47_02880 putative spore germination protein
YP_003246142.1	KEGG: pjd:Pjdr2_3333 hypothetical protein
YP_003246143.1	PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: bld:BLi04271 YxdJ
YP_003246144.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bbe:BBR47_05440 two-component sensor histidine kinase
YP_003246145.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbe:BBR47_05450 ABC transporter ATP-binding protein
YP_003246146.1	PFAM: protein of unknown function DUF214; KEGG: bay:RBAM_036600 YxdM
YP_003246147.1	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: bca:BCE_4889 hypothetical protein
YP_003246148.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bcz:BCZK2329 GntR family transcriptional regulator
YP_003246149.1	PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_3651 major facilitator transporter
YP_003246150.1	PFAM: ThiJ/PfpI domain protein; KEGG: pfl:PFL_4109 ThiJ/PfpI family protein
YP_003246151.1	PFAM: aminoglycoside phosphotransferase; KEGG: pjd:Pjdr2_6038 aminoglycoside phosphotransferase
YP_003246152.1	KEGG: pjd:Pjdr2_6156 hypothetical protein
YP_003246153.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ana:all0345 transcriptional regulator
YP_003246154.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbe:BBR47_56790 putative oxidoreductase
YP_003246155.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: amr:AM1_2928 hypothetical protein
YP_003246156.1	KEGG: pjd:Pjdr2_6167 hypothetical protein
YP_003246157.1	KEGG: aac:Aaci_2351 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_003246158.1	KEGG: bcv:Bcav_2259 major facilitator superfamily MFS_1
YP_003246159.1	PFAM: ABC-2 type transporter; KEGG: bcg:BCG9842_B3534 hypothetical protein
YP_003246160.1	PFAM: ABC-2 type transporter; KEGG: bld:BLi04004 hypothetical protein
YP_003246161.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcg:BCG9842_B3536 ABC transporter, ATP-binding protein
YP_003246162.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; KEGG: bca:BCE_1864 sensor histidine kinase, putative
YP_003246163.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bcg:BCG9842_B3538 DNA-binding response regulator, LuxR family
YP_003246164.1	KEGG: pjd:Pjdr2_6028 YhgE/Pip N-terminal domain protein
YP_003246165.1	PFAM: regulatory protein TetR; KEGG: pjd:Pjdr2_6029 transcriptional regulator, TetR family
YP_003246166.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bld:BLi02810 YcgT
YP_003246167.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afl:Aflv_1159 ferrichrome ABC transporter (ATP-binding protein)
YP_003246168.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: bha:BH3895 glycine betaine transporter
YP_003246169.1	PFAM: helix-turn-helix HxlR type; KEGG: bha:BH0737 cinnamoyl ester hydrolase
YP_003246170.1	KEGG: rpd:RPD_3143 hypothetical protein
YP_003246171.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcg:BCG9842_B4244 glyoxylase family protein
YP_003246172.1	KEGG: bbe:BBR47_08670 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_003246173.1	KEGG: bbe:BBR47_08660 hypothetical protein
YP_003246174.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bwe:BcerKBAB4_2398 hypothetical protein
YP_003246175.1	PFAM: copper amine oxidase domain protein; KEGG: pjd:Pjdr2_4860 copper amine oxidase domain protein
YP_003246176.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH3911 two-component response regulator
YP_003246177.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bld:BLi04212 YtsB
YP_003246178.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3913 ABC transporter ATP-binding protein
YP_003246179.1	PFAM: protein of unknown function DUF214; KEGG: bld:BLi04210 YtsD
YP_003246180.1	KEGG: bcu:BCAH820_2781 hypothetical protein
YP_003246181.1	PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_3916 major facilitator transporter
YP_003246182.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ckr:CKR_1358 hypothetical protein
YP_003246183.1	TIGRFAM: FAD-linked oxidoreductase; PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein; KEGG: bbe:BBR47_55800 putative FAD-dependent oxidoreductase
YP_003246184.1	PFAM: alanine racemase domain protein; KEGG: bbe:BBR47_55790 hypothetical protein
YP_003246185.1	PFAM: copper amine oxidase domain protein; Collagen triple helix repeat; KEGG: bce:BC4725 hypothetical protein
YP_003246186.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; KEGG: ssp:SSPP206 putative hydrolase
YP_003246187.1	PFAM: cyclic nucleotide-binding; KEGG: bca:BCE_3786 transcriptional regulator
YP_003246188.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ckr:CKR_1639 hypothetical protein
YP_003246189.1	KEGG: ckr:CKR_1640 hypothetical protein
YP_003246190.1	KEGG: pjd:Pjdr2_1034 hypothetical protein
YP_003246191.1	PFAM: Luciferase-like, subgroup; KEGG: bbe:BBR47_03020 hypothetical protein
YP_003246192.1	PFAM: Activator of Hsp90 ATPase 1 family protein; Polyketide cyclase/dehydrase; KEGG: bbe:BBR47_33180 hypothetical protein
YP_003246193.1	PFAM: regulatory protein ArsR; regulatory protein MarR; transcriptional regulator TrmB; SMART: regulatory protein ArsR; KEGG: pjd:Pjdr2_5544 transcriptional regulator, TrmB
YP_003246194.1	PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; KEGG: pjd:Pjdr2_1508 excinuclease ABC C subunit domain protein
YP_003246195.1	KEGG: bbe:BBR47_08940 hypothetical protein
YP_003246196.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbe:BBR47_28190 putative transporter
YP_003246197.1	TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: pjd:Pjdr2_2509 transcription elongation factor GreA
YP_003246198.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: pjd:Pjdr2_6223 mannitol dehydrogenase domain protein
YP_003246199.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: pjd:Pjdr2_6224 protein-N(pi)-phosphohistidine--sugar phosphotransferase
YP_003246200.1	PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; KEGG: pjd:Pjdr2_6225 PTS modulated transcriptional regulator, MtlR family
YP_003246201.1	TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; phosphotransferase system EIIC; KEGG: pjd:Pjdr2_6226 PTS system, mannitol-specific IIC subunit
YP_003246202.1	KEGG: jde:Jden_1472 hypothetical protein
YP_003246203.1	KEGG: bcg:BCG9842_B2424 hypothetical protein
YP_003246204.1	PFAM: Forkhead-associated protein; transcriptional regulator domain protein; SMART: Forkhead-associated protein; KEGG: bha:BH1777 hypothetical protein
YP_003246205.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bcy:Bcer98_1028 glycerophosphoryl diester phosphodiesterase
YP_003246206.1	KEGG: pjd:Pjdr2_6171 hypothetical protein
YP_003246207.1	PFAM: polysaccharide deacetylase; KEGG: pjd:Pjdr2_6170 polysaccharide deacetylase
YP_003246209.1	KEGG: bca:BCE_5336 hypothetical protein
YP_003246210.1	PFAM: protein of unknown function DUF81; KEGG: bcx:BCA_1679 hypothetical protein
YP_003246211.1	TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: bcz:pE33L466_0444 alkylphosphonate uptake protein
YP_003246212.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: cpy:Cphy_0710 NAD-dependent epimerase/dehydratase
YP_003246213.1	PFAM: Cupin domain protein; KEGG: eat:EAT1b_0963 hypothetical protein
YP_003246214.1	KEGG: pjd:Pjdr2_0281 hypothetical protein
YP_003246215.1	PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: pjd:Pjdr2_0282 helix-turn-helix type 11 domain protein
YP_003246216.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pjd:Pjdr2_2112 methyltransferase type 11
YP_003246218.1	KEGG: cby:CLM_1907 hypothetical protein
YP_003246219.1	PFAM: phosphatidate cytidylyltransferase; KEGG: abu:Abu_0191 CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
YP_003246220.1	KEGG: lsp:Bsph_4076 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein
YP_003246221.1	PFAM: alpha/beta hydrolase fold; KEGG: lsp:Bsph_4077 sigma factor SigB regulation protein
YP_003246222.1	PFAM: glycosyl transferase family 2; chitin synthase; KEGG: afl:Aflv_1924 glycosyltransferase, probably involved in cell wall biogenesis
YP_003246223.1	PFAM: acyltransferase 3; KEGG: bcx:BCA_5606 hypothetical protein
YP_003246224.1	KEGG: cpy:Cphy_2572 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 18; SMART: chitinase II
YP_003246225.1	KEGG: bbe:BBR47_46960 hypothetical protein
YP_003246226.1	PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcl:ABC3540 MerR family transcriptional regulator
YP_003246227.1	PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: bcl:ABC3541 hypothetical protein
YP_003246228.1	PFAM: aminoglycoside phosphotransferase; KEGG: bwe:BcerKBAB4_3029 hypothetical protein
YP_003246229.1	PFAM: protein of unknown function UPF0061; KEGG: dae:Dtox_2160 protein of unknown function UPF0061
YP_003246230.1	PFAM: protein of unknown function DUF1112; KEGG: xcv:XCV1077 hypothetical protein
YP_003246231.1	PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; Tetratricopeptide TPR_2 repeat protein; KEGG: bbe:BBR47_58480 hypothetical protein
YP_003246232.1	PFAM: S-layer domain protein; KEGG: pfo:Pfl01_0160 BNR repeat-containing glycosyl hydrolase
YP_003246233.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bwe:BcerKBAB4_2400 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003246234.1	KEGG: bcg:BCG9842_B2017 hypothetical cytosolic protein
YP_003246235.1	KEGG: rha:RHA1_ro03269 hypothetical protein
YP_003246236.1	PFAM: Ankyrin; SMART: Ankyrin; KEGG: bbe:BBR47_58360 hypothetical protein
YP_003246238.1	KEGG: fjo:Fjoh_4160 hypothetical protein
YP_003246239.1	PFAM: protein of unknown function DUF418; protein of unknown function DUF405; KEGG: bha:BH0583 hypothetical protein
YP_003246240.1	PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: lsp:Bsph_2318 nitrate/nitrite sensor protein
YP_003246241.1	PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bha:BH0581 two-component response regulator
YP_003246242.1	KEGG: bbe:BBR47_58460 hypothetical protein
YP_003246243.1	PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: cce:Ccel_2227 platelet-activating factor acetylhydrolase plasma/intracellular isoform II
YP_003246245.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; response regulator receiver; glycoside hydrolase family 2 sugar binding; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: bbe:BBR47_58510 two-component hybrid sensor and regulator
YP_003246246.1	KEGG: bha:BH0785 endo-beta-N-acetylglucosaminidase; PFAM: glycoside hydrolase family 85; PKD domain containing protein; coagulation factor 5/8 type domain protein; SMART: PKD domain containing protein
YP_003246247.1	PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0796 hypothetical protein
YP_003246248.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5579 binding-protein-dependent transport systems inner membrane component
YP_003246249.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0794 sugar transport system (permease) (binding protein dependent transporter)
YP_003246250.1	PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; KEGG: pjd:Pjdr2_5582 two component transcriptional regulator, AraC family
YP_003246251.1	PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_5583 histidine kinase
YP_003246253.1	PFAM: M trans-acting positive regulator; Helix-turn-helix Mga DNA-binding trans-acting positive regulator; KEGG: hypothetical protein
YP_003246254.1	TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: amt:Amet_4228 purine nucleoside phosphorylase
YP_003246255.1	KEGG: lba:Lebu_0306 hypothetical protein
YP_003246256.1	PFAM: cobalt transport protein; KEGG: lba:Lebu_0305 cobalt transport protein
YP_003246257.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lba:Lebu_0304 ABC transporter related
YP_003246258.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lba:Lebu_0300 ABC transporter related
YP_003246259.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pjd:Pjdr2_3298 inosine/uridine-preferring nucleoside hydrolase
YP_003246260.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bbe:BBR47_15130 putative nucleosidase
YP_003246261.1	KEGG: cce:Ccel_3230 uracil-DNA glycosylase superfamily
YP_003246262.1	PFAM: aminoglycoside 3-N-acetyltransferase; KEGG: pjd:Pjdr2_3266 aminoglycoside 3-N-acetyltransferase
YP_003246263.1	KEGG: bwe:BcerKBAB4_2738 TetR family transcriptional regulator
YP_003246264.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bca:BCE_3194 EmrB/QacA family drug resistance transporter
YP_003246265.1	PFAM: protein of unknown function DUF1211; KEGG: bbe:BBR47_58600 hypothetical protein
YP_003246266.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bph:Bphy_4102 activator of HSP90 ATPase 1 family protein
YP_003246267.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pjd:Pjdr2_6090 activator of HSP90 ATPase 1 family protein
YP_003246268.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: pjd:Pjdr2_6091 transcriptional regulator, MerR family
YP_003246269.1	KEGG: stp:Strop_2943 hypothetical protein
YP_003246270.1	PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bgl:bglu_2g06830 transcriptional regulator, MarR family protein
YP_003246271.1	PFAM: peptidase C60 sortase A and B; KEGG: spj:MGAS2096_Spy1122 sortase B family protein
YP_003246272.1	TIGRFAM: conserved repeat domain protein; PFAM: Collagen binding domain protein; Cna B domain protein; KEGG: hypothetical protein
YP_003246273.1	PFAM: metallophosphoesterase; Ig domain protein group 2 domain protein; GLUG domain protein; KEGG: bcv:Bcav_3394 metallophosphoesterase
YP_003246274.1	KEGG: cpy:Cphy_3572 hypothetical protein
YP_003246275.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: pjd:Pjdr2_4864 Cof-like hydrolase
YP_003246276.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2552 ABC transporter permease
YP_003246277.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2553 ABC transporter permease
YP_003246278.1	PFAM: extracellular solute-binding protein family 1; KEGG: cpe:CPE0576 ABC transporter
YP_003246279.1	PFAM: protein of unknown function DUF218; KEGG: tte:TTE2177 hypothetical protein
YP_003246280.1	PFAM: ROK family protein; KEGG: esi:Exig_0370 ROK family protein
YP_003246282.1	PFAM: conserved hypothetical protein; KEGG: pjd:Pjdr2_6144 hypothetical protein
YP_003246283.1	PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_6145 NUDIX hydrolase
YP_003246284.1	TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: pjd:Pjdr2_4658 cytidyltransferase-related domain protein
YP_003246285.1	TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: dal:Dalk_3487 nicotinamide mononucleotide transporter PnuC
YP_003246286.1	KEGG: pjd:Pjdr2_2886 hypothetical protein
YP_003246287.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pjd:Pjdr2_5479 glyoxalase/bleomycin resistance protein/dioxygenase
YP_003246288.1	PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: bbe:BBR47_05850 putative transcriptional regulator
YP_003246289.1	PFAM: protein of unknown function DUF87; KEGG: dfe:Dfer_0961 protein of unknown function DUF87
YP_003246290.1	KEGG: dfe:Dfer_0960 hypothetical protein
YP_003246291.1	PFAM: protein of unknown function DUF262; KEGG: mma:MM_2559 hypothetical protein
YP_003246292.1	PFAM: FRG domain protein; KEGG: hne:HNE_3339 hypothetical protein
YP_003246293.1	PFAM: protein of unknown function DUF163; KEGG: pjd:Pjdr2_6244 protein of unknown function DUF163
YP_003246294.1	PFAM: cytochrome P450; KEGG: art:Arth_1978 cytochrome P450
YP_003246295.1	PFAM: regulatory protein TetR; KEGG: hypothetical protein
YP_003246296.1	KEGG: bcx:BCA_1813 hypothetical protein
YP_003246297.1	KEGG: bbe:BBR47_07360 hypothetical protein
YP_003246298.1	KEGG: ckr:CKR_0441 hypothetical protein
YP_003246299.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: oih:OB2644 hypothetical protein
YP_003246300.1	KEGG: pjd:Pjdr2_6246 hypothetical protein
YP_003246301.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: pjd:Pjdr2_6249 peptidase S1 and S6 chymotrypsin/Hap
YP_003246302.1	KEGG: pjd:Pjdr2_5981 small acid soluble protein
YP_003246303.1	PFAM: beta-lactamase domain protein; KEGG: pjd:Pjdr2_6251 beta-lactamase domain protein
YP_003246304.1	PFAM: Protein of unknown function YycH; KEGG: pjd:Pjdr2_6252 hypothetical protein
YP_003246305.1	PFAM: YycH family protein; KEGG: pjd:Pjdr2_6253 YycH family protein
YP_003246306.1	KEGG: pjd:Pjdr2_6254 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein
YP_003246307.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pjd:Pjdr2_6255 two component transcriptional regulator, winged helix family
YP_003246308.1	PFAM: Peptidase M23; G5 domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: pjd:Pjdr2_6256 peptidase M23
YP_003246309.1	KEGG: pjd:Pjdr2_6257 hypothetical protein
YP_003246310.1	PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcq:BCQ_3058 DNA-binding response regulator
YP_003246311.1	KEGG: bcu:BCAH820_3257 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_003246312.1	PFAM: protein of unknown function DUF214; KEGG: lin:lin2726 hypothetical protein
YP_003246313.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lwe:lwe2530 ABC transporter, ATP-binding protein
YP_003246314.1	KEGG: pjd:Pjdr2_6258 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase
YP_003246315.1	unwinds double stranded DNA
YP_003246316.1	TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; KEGG: pjd:Pjdr2_6260 ribosomal protein L9
YP_003246317.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: GGDEF domain containing protein; KEGG: pjd:Pjdr2_6261 diguanylate cyclase and phosphoesterase
YP_003246318.1	PFAM: Protein of unknown function DUF2232, membrane; KEGG: pjd:Pjdr2_6262 hypothetical protein
YP_003246319.1	KEGG: nth:Nther_2913 hypothetical protein
YP_003246320.1	PFAM: CBS domain containing protein; KEGG: pjd:Pjdr2_6264 CBS domain containing membrane protein
YP_003246321.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: efa:EF1212 transcriptional regulator
YP_003246322.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bha:BH0021 serine-type D-Ala-D-Ala carboxypeptidase
YP_003246323.1	KEGG: tte:TTE2526 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003246324.1	KEGG: tpd:Teth39_0199 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_003246325.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcr:BCAH187_A0268 oligopeptide ABC transporter, permease protein
YP_003246326.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpd:Teth39_0201 binding-protein-dependent transport systems inner membrane component
YP_003246327.1	PFAM: extracellular solute-binding protein family 5; KEGG: tpd:Teth39_0202 extracellular solute-binding protein
YP_003246329.1	PFAM: protein of unknown function DUF159; KEGG: pjd:Pjdr2_0485 protein of unknown function DUF159
YP_003246331.1	TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: pjd:Pjdr2_6271 ribosomal protein S18
YP_003246332.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pjd:Pjdr2_6272 single-strand binding protein
YP_003246333.1	TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: pjd:Pjdr2_6273 ribosomal protein S6
YP_003246334.1	KEGG: oih:OB2291 hypothetical protein
YP_003246335.1	PFAM: protein of unknown function DUF951; KEGG: pjd:Pjdr2_6276 protein of unknown function DUF951
YP_003246336.1	PFAM: MscS Mechanosensitive ion channel; KEGG: oih:OB3482 hypothetical protein
YP_003246337.1	KEGG: pjd:Pjdr2_6278 hypothetical protein
YP_003246338.1	TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: pjd:Pjdr2_6279 sporulation protein YyaC
YP_003246339.1	KEGG: pjd:Pjdr2_6280 hypothetical protein
YP_003246340.1	TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: pjd:Pjdr2_6281 cysteine desulfurase family protein
YP_003246341.1	KEGG: pjd:Pjdr2_6282 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease
YP_003246342.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pjd:Pjdr2_6283 cobyrinic acid ac-diamide synthase
YP_003246343.1	KEGG: pjd:Pjdr2_6284 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease
YP_003246344.1	TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: pjd:Pjdr2_6285 methyltransferase GidB
YP_003246345.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_003246346.1	TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; Miro domain protein; KEGG: pjd:Pjdr2_6287 tRNA modification GTPase TrmE
YP_003246347.1	PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: pjd:Pjdr2_6288 single-stranded nucleic acid binding R3H domain protein
YP_003246348.1	TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; KEGG: pjd:Pjdr2_6289 60 kDa inner membrane insertion protein
YP_003246349.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_003246350.1	TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: pjd:Pjdr2_6291 ribosomal protein L34
YP_003246351.1	TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein; KEGG: bcg:BCG9842_B1845 6-phosphogluconate dehydrogenase-like protein
YP_003246352.1	PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: btl:BALH_0158 GntR family transcriptional regulator
YP_003246353.1	TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: bbe:BBR47_27300 gluconate permease
YP_003246354.1	TIGRFAM: gluconate kinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: bcq:BCQ_3183 gluconate kinase (2-dehydro-3-deoxygluconokinase)
YP_003246355.1	KEGG: pjd:Pjdr2_5290 hypothetical protein