-- dump date 20240506_001020 -- class Genbank::Contig -- table contig_comment -- id comment NC_010622.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001043.1.REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-WaniewskiREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_010623.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001044.1.REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-WaniewskiREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_010625.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001045.1.REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-WaniewskiREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001045.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_010627.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001046.1.REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-WaniewskiREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNLREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001046.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002725 Source DNA and bacteria available from Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) Contacts: Michelle Lizotte-Waniewski (mlizotte@bio.umass.edu) David Bruce (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 11:44:30 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 7,909 CDSs (total) :: 7,823 Genes (coding) :: 7,518 CDSs (with protein) :: 7,518 Genes (RNA) :: 86 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 4 Pseudo Genes (total) :: 305 CDSs (without protein) :: 305 Pseudo Genes (ambiguous residues) :: 0 of 305 Pseudo Genes (frameshifted) :: 131 of 305 Pseudo Genes (incomplete) :: 250 of 305 Pseudo Genes (internal stop) :: 52 of 305 Pseudo Genes (multiple problems) :: 109 of 305 ##Genome-Annotation-Data-END## COMPLETENESS: full length.