-- dump date 20240506_012639 -- class Genbank::Contig -- table contig_comment -- id comment NC_022041.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP006650.1.REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler softwareREFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on ParacoccusREFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50XREFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006650.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_022042.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP006651.1.REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler softwareREFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on ParacoccusREFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50XREFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006651.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_022049.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP006652.1.REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler softwareREFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on ParacoccusREFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50XREFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006652.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_022043.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP006653.1.REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler softwareREFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on ParacoccusREFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50XREFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006653.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_022044.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP006654.1.REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler softwareREFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on ParacoccusREFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50XREFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006654.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_022050.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP006655.1.REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler softwareREFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on ParacoccusREFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50XREFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP006655.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Newbler de novo assembler software (Roche) v. 2.6 Reference-guided Assembly :: partially based on Paracoccus denitrificans PD1222 Genome Coverage :: 30-50X Sequencing Technology :: 454 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/28/2024 05:13:13 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,704 CDSs (total) :: 4,629 Genes (coding) :: 4,569 CDSs (with protein) :: 4,569 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 60 CDSs (without protein) :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted) :: 22 of 60 Pseudo Genes (incomplete) :: 47 of 60 Pseudo Genes (internal stop) :: 17 of 60 Pseudo Genes (multiple problems) :: 20 of 60 ##Genome-Annotation-Data-END## COMPLETENESS: full length.