-- dump date 20140619_232400 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 561231000001 SEQ_END SEQ_END NC_013421.1 5063892 5063892 DR NC_013421.1; contig end 5063892..5063892 Pectobacterium wasabiae WPP163 YP_003257477.1 CDS dnaA NC_013421.1 53 1450 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 53..1450 Pectobacterium wasabiae WPP163 8532973 YP_003257478.1 CDS Pecwa_0002 NC_013421.1 1455 2555 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1455..2555 Pectobacterium wasabiae WPP163 8528352 YP_003257479.1 CDS recF NC_013421.1 2603 3688 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 2603..3688 Pectobacterium wasabiae WPP163 8528353 YP_003257480.1 CDS gyrB NC_013421.1 3707 6124 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 3707..6124 Pectobacterium wasabiae WPP163 8528354 YP_003257481.1 CDS Pecwa_0005 NC_013421.1 6241 7431 R PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0005 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(6241..7431) Pectobacterium wasabiae WPP163 8528355 YP_003257482.1 CDS Pecwa_0006 NC_013421.1 7658 9661 R PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: pct:PC1_0007 methyl-accepting chemotaxis sensory transducer with cache sensor; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(7658..9661) Pectobacterium wasabiae WPP163 8528356 YP_003257483.1 CDS Pecwa_0007 NC_013421.1 9975 10988 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA4436 LacI family transcriptional regulator; LacI family transcriptional regulator complement(9975..10988) Pectobacterium wasabiae WPP163 8528357 YP_003257484.1 CDS Pecwa_0008 NC_013421.1 11202 11507 D PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: pct:PC1_0009 phosphotransferase system lactose/cellobiose-specific IIsubunit beta; PTS system lactose/cellobiose-specific transporter subunit IIB 11202..11507 Pectobacterium wasabiae WPP163 8528358 YP_003257485.1 CDS Pecwa_0009 NC_013421.1 11524 12837 D KEGG: eca:ECA4434 PTS system, IIBC component; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 11524..12837 Pectobacterium wasabiae WPP163 8528359 YP_003257486.1 CDS Pecwa_0010 NC_013421.1 12827 13159 D PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: eca:ECA4433 pts system, cellobiose-specific IIA component; PTS system lactose/cellobiose-specific transporter subunit IIA 12827..13159 Pectobacterium wasabiae WPP163 8528360 YP_003257487.1 CDS Pecwa_0011 NC_013421.1 13175 14617 D PFAM: glycoside hydrolase family 1; KEGG: eca:ECA4432 6-phospho-beta-glucosidase; glycoside hydrolase family 1 13175..14617 Pectobacterium wasabiae WPP163 8528361 YP_003257488.1 CDS Pecwa_0012 NC_013421.1 14773 15588 D YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; sugar phosphatase 14773..15588 Pectobacterium wasabiae WPP163 8528362 YP_003257489.1 CDS Pecwa_0013 NC_013421.1 15973 16866 D KEGG: pmr:PMI1798 lipoprotein; lipoprotein 15973..16866 Pectobacterium wasabiae WPP163 8528363 YP_003257490.1 CDS Pecwa_0014 NC_013421.1 17108 18004 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4427 LysR family transcriptional regulator; LysR family transcriptional regulator complement(17108..18004) Pectobacterium wasabiae WPP163 8528364 YP_003257491.1 CDS Pecwa_0015 NC_013421.1 18147 19697 D PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4426 extracellular solute-binding protein; family 5 extracellular solute-binding protein 18147..19697 Pectobacterium wasabiae WPP163 8528365 YP_003257492.1 CDS Pecwa_0016 NC_013421.1 19766 20650 D PFAM: dihydrodipicolinate synthetase; KEGG: eca:ECA4425 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 19766..20650 Pectobacterium wasabiae WPP163 8528366 YP_003257493.1 CDS Pecwa_0017 NC_013421.1 20754 21707 D PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: pct:PC1_0017 inosine/uridine-preferring nucleoside hydrolase; ribosylpyrimidine nucleosidase 20754..21707 Pectobacterium wasabiae WPP163 8528367 YP_003257494.1 CDS Pecwa_0018 NC_013421.1 21712 22680 D PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: pct:PC1_0018 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 21712..22680 Pectobacterium wasabiae WPP163 8528368 YP_003257495.1 CDS Pecwa_0019 NC_013421.1 22680 23657 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_0019 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 22680..23657 Pectobacterium wasabiae WPP163 8528369 YP_003257496.1 CDS Pecwa_0020 NC_013421.1 23654 24562 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4421 ABC transporter permease; binding-protein-dependent transporters inner membrane component 23654..24562 Pectobacterium wasabiae WPP163 8528370 YP_003257497.1 CDS Pecwa_0021 NC_013421.1 24602 26407 D PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_0021 ABC transporter related; ABC transporter 24602..26407 Pectobacterium wasabiae WPP163 8528371 YP_003257498.1 CDS Pecwa_0022 NC_013421.1 26772 27470 D PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA4419 galactonate operon transcriptional repressor; GntR family transcriptional regulator 26772..27470 Pectobacterium wasabiae WPP163 8528372 YP_003257499.1 CDS Pecwa_0023 NC_013421.1 27467 28363 D PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: eca:ECA4418 2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxygalactonokinase 27467..28363 Pectobacterium wasabiae WPP163 8528373 YP_003257500.1 CDS Pecwa_0024 NC_013421.1 28347 28964 D catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 28347..28964 Pectobacterium wasabiae WPP163 8528374 YP_003257501.1 CDS Pecwa_0025 NC_013421.1 28961 30109 D PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA4416 galactonate dehydratase; galactonate dehydratase 28961..30109 Pectobacterium wasabiae WPP163 8528375 YP_003257502.1 CDS Pecwa_0026 NC_013421.1 30193 30309 D hypothetical protein 30193..30309 Pectobacterium wasabiae WPP163 8528376 YP_003257503.1 CDS Pecwa_0027 NC_013421.1 30654 31943 D TIGRFAM: d-galactonate transporter; phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4415 D-galactonate transporter; d-galactonate transporter 30654..31943 Pectobacterium wasabiae WPP163 8528377 YP_003257504.1 CDS Pecwa_0028 NC_013421.1 32052 32309 R PFAM: protein of unknown function DUF1471; KEGG: eca:ECA4414 hypothetical protein; hypothetical protein complement(32052..32309) Pectobacterium wasabiae WPP163 8528378 YP_003257505.1 CDS ssuB NC_013421.1 32482 33282 R part of the ABC type transporter SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transporter ATP-binding protein complement(32482..33282) Pectobacterium wasabiae WPP163 8528379 YP_003257506.1 CDS Pecwa_0030 NC_013421.1 33279 34073 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4412 aliphatic sulfonates transport permease; binding-protein-dependent transporters inner membrane component complement(33279..34073) Pectobacterium wasabiae WPP163 8528380 YP_003257507.1 CDS Pecwa_0031 NC_013421.1 34084 35226 R catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase complement(34084..35226) Pectobacterium wasabiae WPP163 8528381 YP_003257508.1 CDS Pecwa_0032 NC_013421.1 35285 36307 R part of the ABC type transporter SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; alkanesulfonate transporter substrate-binding subunit complement(35285..36307) Pectobacterium wasabiae WPP163 8528382 YP_003257509.1 CDS Pecwa_0033 NC_013421.1 36706 37029 D PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: pct:PC1_0028 phosphotransferase system lactose/cellobiose-specific IIsubunit beta; PTS system lactose/cellobiose-specific transporter subunit IIB 36706..37029 Pectobacterium wasabiae WPP163 8528383 YP_003257510.1 CDS Pecwa_0034 NC_013421.1 37026 38342 D KEGG: eca:ECA4408 PTS system EIIC component; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 37026..38342 Pectobacterium wasabiae WPP163 8528384 YP_003257511.1 CDS Pecwa_0035 NC_013421.1 38368 39765 D PFAM: glycoside hydrolase family 1; KEGG: eca:ECA4407 glycosyl hydrolase; beta-glucosidase 38368..39765 Pectobacterium wasabiae WPP163 8528385 YP_003257512.1 CDS Pecwa_0036 NC_013421.1 40035 40292 R PFAM: protein of unknown function DUF1471; KEGG: eca:ECA4406 hypothetical protein; hypothetical protein complement(40035..40292) Pectobacterium wasabiae WPP163 8528386 YP_003257513.1 CDS Pecwa_0037 NC_013421.1 40529 41815 D KEGG: eca:ECA4405 hypothetical protein; hypothetical protein 40529..41815 Pectobacterium wasabiae WPP163 8528387 YP_003257514.1 CDS Pecwa_0038 NC_013421.1 41862 42236 R PFAM: protein of unknown function DUF1375; KEGG: eca:ECA4404 hypothetical protein; hypothetical protein complement(41862..42236) Pectobacterium wasabiae WPP163 8528388 YP_003257515.1 CDS Pecwa_0039 NC_013421.1 42625 43038 D with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA 42625..43038 Pectobacterium wasabiae WPP163 8528389 YP_003257516.1 CDS Pecwa_0040 NC_013421.1 43181 43633 D 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; heat shock chaperone IbpB 43181..43633 Pectobacterium wasabiae WPP163 8528390 YP_003257517.1 CDS Pecwa_0041 NC_013421.1 43747 44361 R hypothetical protein complement(43747..44361) Pectobacterium wasabiae WPP163 8528391 YP_003257518.1 CDS Pecwa_0042 NC_013421.1 44599 46257 D TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; TrkA-C domain protein; KEGG: eca:ECA4401 hypothetical protein; hypothetical protein 44599..46257 Pectobacterium wasabiae WPP163 8528392 YP_003257519.1 CDS Pecwa_0043 NC_013421.1 46783 48195 D TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter; citrate transporter; KEGG: eca:ECA4400 sodium:sulfate symporter; anion transporter 46783..48195 Pectobacterium wasabiae WPP163 8528393 YP_003257520.1 CDS Pecwa_0044 NC_013421.1 48388 50016 D C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; sensory histidine kinase DcuS 48388..50016 Pectobacterium wasabiae WPP163 8528394 YP_003257521.1 CDS Pecwa_0045 NC_013421.1 50009 50731 D response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; DNA-binding transcriptional activator DcuR 50009..50731 Pectobacterium wasabiae WPP163 8528395 YP_003257522.1 CDS Pecwa_0047 NC_013421.1 51729 52007 D KEGG: eca:ECA4396 hypothetical protein; hypothetical protein 51729..52007 Pectobacterium wasabiae WPP163 8528397 YP_003257523.1 CDS Pecwa_0048 NC_013421.1 52146 53489 R PFAM: citrate carrier protein; KEGG: eca:ECA4395 Na(+)-malate symporter; citrate carrier protein complement(52146..53489) Pectobacterium wasabiae WPP163 8528398 YP_003257524.1 CDS Pecwa_0049 NC_013421.1 55087 56694 D PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4394 periplasmic dipeptide transporter; family 5 extracellular solute-binding protein 55087..56694 Pectobacterium wasabiae WPP163 8528399 YP_003257525.1 CDS Pecwa_0050 NC_013421.1 56929 57948 D transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB 56929..57948 Pectobacterium wasabiae WPP163 8528400 YP_003257526.1 CDS Pecwa_0051 NC_013421.1 57961 58863 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4392 dipeptide transporter; dipeptide transporter 57961..58863 Pectobacterium wasabiae WPP163 8528401 YP_003257527.1 CDS dppD NC_013421.1 58877 59857 D DppD and DppF are the ATP-binding proteins of the ABC dipeptide transporter DppABCDF; dipeptide transporter ATP-binding subunit 58877..59857 Pectobacterium wasabiae WPP163 8528402 YP_003257528.1 CDS dppF NC_013421.1 59854 60864 D Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 59854..60864 Pectobacterium wasabiae WPP163 8528403 YP_003257529.1 CDS Pecwa_0054 NC_013421.1 60930 61535 R KEGG: esa:ESA_03902 hypothetical protein; hypothetical protein complement(60930..61535) Pectobacterium wasabiae WPP163 8528404 YP_003257530.1 CDS Pecwa_0055 NC_013421.1 61721 62158 R KEGG: pct:PC1_0050 hypothetical protein; hypothetical protein complement(61721..62158) Pectobacterium wasabiae WPP163 8528405 YP_003257531.1 CDS Pecwa_0056 NC_013421.1 62305 62796 R KEGG: pen:PSEEN0864 hypothetical protein; hypothetical protein complement(62305..62796) Pectobacterium wasabiae WPP163 8528406 YP_003257532.1 CDS Pecwa_0057 NC_013421.1 62790 63497 R hypothetical protein complement(62790..63497) Pectobacterium wasabiae WPP163 8528407 YP_003257533.1 CDS Pecwa_0058 NC_013421.1 63668 63937 R KEGG: pen:PSEEN2319 hypothetical protein; hypothetical protein complement(63668..63937) Pectobacterium wasabiae WPP163 8528408 YP_003257534.1 CDS Pecwa_0059 NC_013421.1 64055 64594 R hypothetical protein complement(64055..64594) Pectobacterium wasabiae WPP163 8528409 YP_003257535.1 CDS Pecwa_0060 NC_013421.1 64650 65021 R hypothetical protein complement(64650..65021) Pectobacterium wasabiae WPP163 8528410 YP_003257536.1 CDS Pecwa_0061 NC_013421.1 65245 65763 R TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA4275 hypothetical protein; type VI secretion system effector complement(65245..65763) Pectobacterium wasabiae WPP163 8528411 YP_003257537.1 CDS avtA NC_013421.1 66115 67368 R transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase complement(66115..67368) Pectobacterium wasabiae WPP163 8528412 YP_003257538.1 CDS Pecwa_0063 NC_013421.1 67761 68969 D KEGG: eca:ECA4385 hypothetical protein; hypothetical protein 67761..68969 Pectobacterium wasabiae WPP163 8528413 YP_003257539.1 CDS Pecwa_0064 NC_013421.1 69077 70522 R catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase complement(69077..70522) Pectobacterium wasabiae WPP163 8528414 YP_003257540.1 CDS Pecwa_0065 NC_013421.1 70536 71558 R PFAM: alcohol dehydrogenase GroES; alcohol dehydrogenase zinc-binding domain protein; KEGG: pct:PC1_0059 alcohol dehydrogenase GroES; alcohol dehydrogenase GroES complement(70536..71558) Pectobacterium wasabiae WPP163 8528415 YP_003257541.1 CDS Pecwa_0066 NC_013421.1 71699 72613 D PFAM: GntR family transcriptional regulator; KEGG: eca:ECA4381 DNA-binding protein; GntR family transcriptional regulator 71699..72613 Pectobacterium wasabiae WPP163 8528416 YP_003257542.1 CDS Pecwa_0067 NC_013421.1 72827 74176 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4380 sugar transporter; major facilitator superfamily protein 72827..74176 Pectobacterium wasabiae WPP163 8528417 YP_003257543.1 CDS Pecwa_0068 NC_013421.1 74443 76236 D KEGG: eca:ECA4379 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 74443..76236 Pectobacterium wasabiae WPP163 8528418 YP_003257544.1 CDS Pecwa_0069 NC_013421.1 76340 77365 R KEGG: smt:Smal_3939 hypothetical protein; hypothetical protein complement(76340..77365) Pectobacterium wasabiae WPP163 8528419 YP_003257545.1 CDS Pecwa_0070 NC_013421.1 77712 81191 R cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; cellulose synthase subunit BcsC complement(77712..81191) Pectobacterium wasabiae WPP163 8528420 YP_003257546.1 CDS Pecwa_0071 NC_013421.1 81173 82288 R catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase complement(81173..82288) Pectobacterium wasabiae WPP163 8528421 YP_003257547.1 CDS Pecwa_0072 NC_013421.1 82295 84652 R binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein complement(82295..84652) Pectobacterium wasabiae WPP163 8528422 YP_003257548.1 CDS bcsA NC_013421.1 84727 87426 R polymerizes uridine 5'-diphosphate glucose to cellulose; acts with BcsB, BcsZ and BcsC in cellulose biosynthesis; cellulose synthase catalytic subunit complement(84727..87426) Pectobacterium wasabiae WPP163 8528423 YP_003257549.1 CDS Pecwa_0074 NC_013421.1 87423 88160 R TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: YhjQ family protein; KEGG: eca:ECA4369 hypothetical protein; cellulose synthase operon protein YhjQ complement(87423..88160) Pectobacterium wasabiae WPP163 8528424 YP_003257550.1 CDS Pecwa_0075 NC_013421.1 88163 88372 R KEGG: pct:PC1_0078 hypothetical protein; hypothetical protein complement(88163..88372) Pectobacterium wasabiae WPP163 8528425 YP_003257551.1 CDS Pecwa_0076 NC_013421.1 89087 90661 D TIGRFAM: cellulose biosynthesis protein BcsE; KEGG: pct:PC1_0079 cellulose biosynthesis protein BcsE; cellulose biosynthesis protein BcsE 89087..90661 Pectobacterium wasabiae WPP163 8528426 YP_003257552.1 CDS Pecwa_0077 NC_013421.1 90658 90864 D TIGRFAM: celllulose biosynthesis operon protein BcsF/YhjT; KEGG: eca:ECA4365 hypothetical protein; celllulose biosynthesis operon protein BcsF/YhjT 90658..90864 Pectobacterium wasabiae WPP163 8528427 YP_003257553.1 CDS Pecwa_0078 NC_013421.1 90866 92524 D TIGRFAM: cellulose synthase operon protein YhjU; KEGG: pct:PC1_0081 cellulose synthase operon protein YhjU; cellulose synthase operon protein YhjU 90866..92524 Pectobacterium wasabiae WPP163 8528428 YP_003257554.1 CDS Pecwa_0079 NC_013421.1 92959 94140 D PFAM: histidine kinase HAMP region domain protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; KEGG: eca:ECA4363 hypothetical protein; diguanylate cyclase 92959..94140 Pectobacterium wasabiae WPP163 8528429 YP_003257555.1 CDS Pecwa_0080 NC_013421.1 94459 95751 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 94459..95751 Pectobacterium wasabiae WPP163 8528430 YP_003257556.1 CDS Pecwa_0081 NC_013421.1 96108 97610 D PFAM: peptidase M16 domain protein; KEGG: pct:PC1_0084 peptidase M16 domain protein; peptidase M16 domain-containing protein 96108..97610 Pectobacterium wasabiae WPP163 8528431 YP_003257557.1 CDS Pecwa_0082 NC_013421.1 97678 98610 R PFAM: PfkB domain protein; KEGG: pct:PC1_0086 PfkB domain protein; PfkB domain-containing protein complement(97678..98610) Pectobacterium wasabiae WPP163 8528432 YP_003257558.1 CDS Pecwa_0083 NC_013421.1 98777 99793 R TIGRFAM: ribonuclease; PFAM: ribonuclease BN; KEGG: pct:PC1_0087 ribonuclease; ribonuclease complement(98777..99793) Pectobacterium wasabiae WPP163 8528433 YP_003257559.1 CDS Pecwa_0084 NC_013421.1 99923 101125 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4358 major facilitator superfamily transporter; major facilitator superfamily transporter 99923..101125 Pectobacterium wasabiae WPP163 8528434 YP_003257560.1 CDS Pecwa_0085 NC_013421.1 101161 101727 R KEGG: pct:PC1_0089 hypothetical protein; hypothetical protein complement(101161..101727) Pectobacterium wasabiae WPP163 8528435 YP_003257561.1 CDS Pecwa_0086 NC_013421.1 101914 102591 R TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: pct:PC1_0091 hypothetical protein; hypothetical protein complement(101914..102591) Pectobacterium wasabiae WPP163 8528436 YP_003257562.1 CDS Pecwa_0087 NC_013421.1 102808 103053 D TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 102808..103053 Pectobacterium wasabiae WPP163 8528437 YP_003257563.1 CDS zntA NC_013421.1 103113 105467 R P-type ATPase involved in the export of lead, cadmium, zinc and mercury; zinc/cadmium/mercury/lead ABC transporter ATPase complement(103113..105467) Pectobacterium wasabiae WPP163 8528438 YP_003257564.1 CDS Pecwa_0089 NC_013421.1 105562 106191 R PFAM: YhhN family protein; KEGG: pct:PC1_0094 YhhN family protein; hypothetical protein complement(105562..106191) Pectobacterium wasabiae WPP163 8528439 YP_003257565.1 CDS Pecwa_0090 NC_013421.1 106373 106693 D PFAM: Domain of unknown function DUF1820; KEGG: eca:ECA4350 hypothetical protein; hypothetical protein 106373..106693 Pectobacterium wasabiae WPP163 8528440 YP_003257566.1 CDS Pecwa_0091 NC_013421.1 106776 107054 R PFAM: protein of unknown function DUF1145; KEGG: pct:PC1_0097 hypothetical protein; hypothetical protein complement(106776..107054) Pectobacterium wasabiae WPP163 8528441 YP_003257567.1 CDS rsmD NC_013421.1 107081 107656 R catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase complement(107081..107656) Pectobacterium wasabiae WPP163 8528442 YP_003257568.1 CDS Pecwa_0093 NC_013421.1 107995 109410 D signal recognition protein receptor; functions in the targeting and insertion of membrane proteins; cell division protein FtsY 107995..109410 Pectobacterium wasabiae WPP163 8528443 YP_003257569.1 CDS Pecwa_0094 NC_013421.1 109416 110087 D ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; cell division protein FtsE 109416..110087 Pectobacterium wasabiae WPP163 8528444 YP_003257570.1 CDS ftsX NC_013421.1 110077 111045 D ABC transporter membrane protein; cell division protein FtsX 110077..111045 Pectobacterium wasabiae WPP163 8528445 YP_003257571.1 CDS Pecwa_0096 NC_013421.1 111367 112224 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 111367..112224 Pectobacterium wasabiae WPP163 8528446 YP_003257572.1 CDS Pecwa_0097 NC_013421.1 112313 112759 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA4342 acetyltransferase; N-acetyltransferase GCN5 complement(112313..112759) Pectobacterium wasabiae WPP163 8528447 YP_003257573.1 CDS Pecwa_0098 NC_013421.1 113165 114277 D PFAM: extracellular ligand-binding receptor; KEGG: eca:ECA4341 leucine-specific binding protein; extracellular ligand-binding receptor 113165..114277 Pectobacterium wasabiae WPP163 8528448 YP_003257574.1 CDS Pecwa_0099 NC_013421.1 114435 115361 D LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease subunit LivH 114435..115361 Pectobacterium wasabiae WPP163 8528449 YP_003257575.1 CDS livM NC_013421.1 115358 116632 D Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine ABC transporter permease 115358..116632 Pectobacterium wasabiae WPP163 8528450 YP_003257576.1 CDS livG NC_013421.1 116629 117399 D Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine ABC transporter ATP-binding protein 116629..117399 Pectobacterium wasabiae WPP163 8528451 YP_003257577.1 CDS livF NC_013421.1 117405 118106 D with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transporter; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine ABC transporter ATP-binding protein 117405..118106 Pectobacterium wasabiae WPP163 8528452 YP_003257578.1 CDS Pecwa_0103 NC_013421.1 118171 119361 D PFAM: aminotransferase class I and II; KEGG: eca:ECA4336 aminotransferase; GntR family transcriptional regulator 118171..119361 Pectobacterium wasabiae WPP163 8528453 YP_003257579.1 CDS Pecwa_0104 NC_013421.1 119460 121106 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: pct:PC1_0110 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(119460..121106) Pectobacterium wasabiae WPP163 8528454 YP_003257580.1 CDS Pecwa_0105 NC_013421.1 121703 123373 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: pct:PC1_0111 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(121703..123373) Pectobacterium wasabiae WPP163 8528455 YP_003257581.1 CDS Pecwa_0106 NC_013421.1 124119 125789 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA4333 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(124119..125789) Pectobacterium wasabiae WPP163 8528456 YP_003257582.1 CDS Pecwa_0107 NC_013421.1 126058 127737 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: pct:PC1_0113 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(126058..127737) Pectobacterium wasabiae WPP163 8528457 YP_003257583.1 CDS Pecwa_0108 NC_013421.1 128037 129395 R member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; inner membrane permease YgbN complement(128037..129395) Pectobacterium wasabiae WPP163 8528458 YP_003257584.1 CDS Pecwa_0109 NC_013421.1 129586 130368 R PFAM: xylose isomerase; KEGG: pct:PC1_0115 hydroxypyruvate isomerase; hydroxypyruvate isomerase complement(129586..130368) Pectobacterium wasabiae WPP163 8528459 YP_003257585.1 CDS Pecwa_0110 NC_013421.1 130387 131043 R PFAM: class II aldolase/adducin family protein; KEGG: pct:PC1_0116 L-fuculose-phosphate aldolase; aldolase complement(130387..131043) Pectobacterium wasabiae WPP163 8528460 YP_003257586.1 CDS Pecwa_0111 NC_013421.1 131040 132314 R PFAM: type III effector Hrp-dependent outers; KEGG: pct:PC1_0117 type III effector Hrp-dependent outers; Hrp-dependent type III effector protein complement(131040..132314) Pectobacterium wasabiae WPP163 8528461 YP_003257587.1 CDS Pecwa_0112 NC_013421.1 132311 133225 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pct:PC1_0118 2-hydroxy-3-oxopropionate reductase; 2-hydroxy-3-oxopropionate reductase complement(132311..133225) Pectobacterium wasabiae WPP163 8528462 YP_003257588.1 CDS Pecwa_0113 NC_013421.1 133548 134309 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: eca:ECA4325 DeoR family transcriptional regulator; DeoR family transcriptional regulator 133548..134309 Pectobacterium wasabiae WPP163 8528463 YP_003257589.1 CDS Pecwa_0114 NC_013421.1 134523 134801 D PFAM: protein of unknown function DUF1778; KEGG: pct:PC1_0122 hypothetical protein; hypothetical protein 134523..134801 Pectobacterium wasabiae WPP163 8528464 YP_003257590.1 CDS Pecwa_0115 NC_013421.1 134877 135170 R PFAM: plasmid stabilization system; KEGG: pct:PC1_0123 plasmid stabilization system; plasmid stabilization system complement(134877..135170) Pectobacterium wasabiae WPP163 8528465 YP_003257591.1 CDS Pecwa_0116 NC_013421.1 135163 135405 R TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: pct:PC1_0124 addiction module antidote protein, CopG/Arc/MetJ family; CopG/Arc/MetJ family addiction module antidote protein complement(135163..135405) Pectobacterium wasabiae WPP163 8528466 YP_003257592.1 CDS Pecwa_0117 NC_013421.1 135602 136936 D with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate ABC transporter periplasmic protein 135602..136936 Pectobacterium wasabiae WPP163 8528467 YP_003257593.1 CDS Pecwa_0118 NC_013421.1 137009 137896 D with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate ABC transporter permease 137009..137896 Pectobacterium wasabiae WPP163 8528468 YP_003257594.1 CDS Pecwa_0119 NC_013421.1 137923 138768 D with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate ABC transporter 137923..138768 Pectobacterium wasabiae WPP163 8528469 YP_003257595.1 CDS ugpC NC_013421.1 138967 140040 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate ABC transporter ATP-binding protein 138967..140040 Pectobacterium wasabiae WPP163 8528470 YP_003257596.1 CDS ugpQ NC_013421.1 140040 140789 D hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 140040..140789 Pectobacterium wasabiae WPP163 8528471 YP_003257597.1 CDS Pecwa_0122 NC_013421.1 140983 141939 D PFAM: hypothetical protein; KEGG: eca:ECA4317 transporter; hypothetical protein 140983..141939 Pectobacterium wasabiae WPP163 8528472 YP_003257598.1 CDS Pecwa_0123 NC_013421.1 141953 142249 R KEGG: eca:ECA4316 hypothetical protein; hypothetical protein complement(141953..142249) Pectobacterium wasabiae WPP163 8528473 YP_003257599.1 CDS Pecwa_0124 NC_013421.1 142580 143044 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pct:PC1_0132 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 142580..143044 Pectobacterium wasabiae WPP163 8528474 YP_003257600.1 CDS Pecwa_0125 NC_013421.1 143076 143885 R KEGG: pct:PC1_0133 hypothetical protein; hypothetical protein complement(143076..143885) Pectobacterium wasabiae WPP163 8528475 YP_003257601.1 CDS Pecwa_0126 NC_013421.1 143855 146029 R KEGG: pct:PC1_0134 hypothetical protein; hypothetical protein complement(143855..146029) Pectobacterium wasabiae WPP163 8528476 YP_003257602.1 CDS cpxA NC_013421.1 146194 147564 R part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein complement(146194..147564) Pectobacterium wasabiae WPP163 8528477 YP_003257603.1 CDS Pecwa_0128 NC_013421.1 147561 148259 R response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DCpxR family transcriptional regulator complement(147561..148259) Pectobacterium wasabiae WPP163 8528478 YP_003257604.1 CDS Pecwa_0129 NC_013421.1 148413 148937 D KEGG: eca:ECA4310 stress resistance protein; stress resistance protein 148413..148937 Pectobacterium wasabiae WPP163 8528479 YP_003257605.1 CDS Pecwa_0131 NC_013421.1 149600 153349 D KEGG: pmr:PMI0561 hypothetical protein; hypothetical protein 149600..153349 Pectobacterium wasabiae WPP163 8528481 YP_003257606.1 CDS Pecwa_0132 NC_013421.1 153419 154528 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: pmr:PMI0560 ATPase; ATPase 153419..154528 Pectobacterium wasabiae WPP163 8528482 YP_003257607.1 CDS Pecwa_0133 NC_013421.1 154710 157271 D KEGG: pmr:PMI0559 hypothetical protein; hypothetical protein 154710..157271 Pectobacterium wasabiae WPP163 8528483 YP_003257608.1 CDS Pecwa_0134 NC_013421.1 157271 158410 D PFAM: von Willebrand factor A; SMART: von Willebrand factor A; KEGG: pmr:PMI0558 hypothetical protein; von Willebrand factor A 157271..158410 Pectobacterium wasabiae WPP163 8528484 YP_003257609.1 CDS Pecwa_0135 NC_013421.1 158407 160479 D PFAM: hypothetical protein; KEGG: pmr:PMI0557 hypothetical protein; hypothetical protein 158407..160479 Pectobacterium wasabiae WPP163 8528485 YP_003257610.1 CDS Pecwa_0136 NC_013421.1 160773 161960 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4309 sugar efflux transporter; sugar efflux transporter 160773..161960 Pectobacterium wasabiae WPP163 8528486 YP_003257611.1 CDS fieF NC_013421.1 162004 162906 D member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; ferrous iron efflux protein F 162004..162906 Pectobacterium wasabiae WPP163 8528487 YP_003257612.1 CDS Pecwa_0138 NC_013421.1 163114 164076 D catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 163114..164076 Pectobacterium wasabiae WPP163 8528488 YP_003257613.1 CDS Pecwa_0139 NC_013421.1 164394 165236 R PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit; integrase catalytic subunit complement(164394..165236) Pectobacterium wasabiae WPP163 8528489 YP_003257614.1 CDS Pecwa_0140 NC_013421.1 165245 165535 R PFAM: transposase IS3/IS911 family protein; KEGG: har:HEAR2248 transposase; transposase IS3/IS911 family protein complement(165245..165535) Pectobacterium wasabiae WPP163 8528490 YP_003257615.1 CDS Pecwa_0143 NC_013421.1 167799 168095 D KEGG: pay:PAU_00937 hypothetical protein; hypothetical protein 167799..168095 Pectobacterium wasabiae WPP163 8528493 YP_003257616.1 CDS Pecwa_0145 NC_013421.1 168463 169548 D TIGRFAM: hypothetical protein; PFAM: YD repeat-containing protein; KEGG: eca:ECA2869 rhs protein; hypothetical protein 168463..169548 Pectobacterium wasabiae WPP163 8528495 YP_003257617.1 CDS Pecwa_0146 NC_013421.1 169798 170493 D hypothetical protein 169798..170493 Pectobacterium wasabiae WPP163 8528496 YP_003257618.1 CDS Pecwa_0149 NC_013421.1 171414 171944 D KEGG: spc:Sputcn32_3204 hypothetical protein; hypothetical protein 171414..171944 Pectobacterium wasabiae WPP163 8528499 YP_003257619.1 CDS Pecwa_0151 NC_013421.1 172451 172687 D hypothetical protein 172451..172687 Pectobacterium wasabiae WPP163 8528501 YP_003257620.1 CDS Pecwa_0152 NC_013421.1 172899 173330 D KEGG: efe:EFER_2927 global regulatory protein; hypothetical protein 172899..173330 Pectobacterium wasabiae WPP163 8528502 YP_003257621.1 CDS Pecwa_0155 NC_013421.1 174215 174658 D KEGG: nmn:NMCC_0593 hypothetical protein; hypothetical protein 174215..174658 Pectobacterium wasabiae WPP163 8528505 YP_003257622.1 CDS Pecwa_0157 NC_013421.1 175264 175713 D KEGG: spc:Sputcn32_1261 hypothetical protein; hypothetical protein 175264..175713 Pectobacterium wasabiae WPP163 8528507 YP_003257623.1 CDS Pecwa_0159 NC_013421.1 176191 176508 D KEGG: dze:Dd1591_2561 hypothetical protein; hypothetical protein 176191..176508 Pectobacterium wasabiae WPP163 8528509 YP_003257624.1 CDS Pecwa_0160 NC_013421.1 176516 176941 D KEGG: dze:Dd1591_2562 hypothetical protein; hypothetical protein 176516..176941 Pectobacterium wasabiae WPP163 8528510 YP_003257625.1 CDS Pecwa_0162 NC_013421.1 177514 177876 D KEGG: eum:ECUMN_0782 hypothetical protein; hypothetical protein 177514..177876 Pectobacterium wasabiae WPP163 8528512 YP_003257626.1 CDS Pecwa_0163 NC_013421.1 177933 178286 R KEGG: esa:ESA_03894 hypothetical protein; hypothetical protein complement(177933..178286) Pectobacterium wasabiae WPP163 8528513 YP_003257627.1 CDS Pecwa_0164 NC_013421.1 178780 179364 R hypothetical protein complement(178780..179364) Pectobacterium wasabiae WPP163 8528514 YP_003257628.1 CDS Pecwa_0165 NC_013421.1 179449 179715 R KEGG: eca:ECA3411 hypothetical protein; hypothetical protein complement(179449..179715) Pectobacterium wasabiae WPP163 8528515 YP_003257629.1 CDS Pecwa_0167 NC_013421.1 180291 181175 D TIGRFAM: N-carbamoylputrescine amidase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eca:ECA4274 carbon-nitrogen hydrolase; N-carbamoylputrescine amidase 180291..181175 Pectobacterium wasabiae WPP163 8528517 YP_003257630.1 CDS Pecwa_0168 NC_013421.1 181179 182282 D catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 181179..182282 Pectobacterium wasabiae WPP163 8528518 YP_003257631.1 CDS tpiA NC_013421.1 182421 183188 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(182421..183188) Pectobacterium wasabiae WPP163 8528519 YP_003257632.1 CDS Pecwa_0170 NC_013421.1 183327 183926 R PFAM: protein of unknown function DUF1454; KEGG: pct:PC1_0155 hypothetical protein; hypothetical protein complement(183327..183926) Pectobacterium wasabiae WPP163 8528520 YP_003257633.1 CDS Pecwa_0171 NC_013421.1 184183 184605 D PFAM: protein of unknown function DUF805; KEGG: eca:ECA4270 hypothetical protein; hypothetical protein 184183..184605 Pectobacterium wasabiae WPP163 8528521 YP_003257634.1 CDS Pecwa_0172 NC_013421.1 184624 185370 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: eca:ECA4269 ferredoxin-NADP reductase; ferredoxin-NADP reductase complement(184624..185370) Pectobacterium wasabiae WPP163 8528522 YP_003257635.1 CDS glpX NC_013421.1 185676 186686 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(185676..186686) Pectobacterium wasabiae WPP163 8528523 YP_003257636.1 CDS Pecwa_0174 NC_013421.1 186812 188323 R TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY-like; KEGG: eca:ECA4267 glycerol kinase; glycerol kinase complement(186812..188323) Pectobacterium wasabiae WPP163 8528524 YP_003257637.1 CDS Pecwa_0175 NC_013421.1 188377 189216 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: pct:PC1_0160 MIP family channel protein; MIP family channel protein complement(188377..189216) Pectobacterium wasabiae WPP163 8528525 YP_003257638.1 CDS Pecwa_0176 NC_013421.1 189766 190005 D PFAM: protein of unknown function DUF904; KEGG: eca:ECA4265 hypothetical protein; hypothetical protein 189766..190005 Pectobacterium wasabiae WPP163 8528526 YP_003257639.1 CDS Pecwa_0177 NC_013421.1 190113 190598 R regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA complement(190113..190598) Pectobacterium wasabiae WPP163 8528527 YP_003257640.1 CDS Pecwa_0178 NC_013421.1 190718 191635 R catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(190718..191635) Pectobacterium wasabiae WPP163 8528528 YP_003257641.1 CDS hslU NC_013421.1 191781 193112 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(191781..193112) Pectobacterium wasabiae WPP163 8528529 YP_003257642.1 CDS Pecwa_0180 NC_013421.1 193122 193652 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(193122..193652) Pectobacterium wasabiae WPP163 8528530 YP_003257643.1 CDS Pecwa_0181 NC_013421.1 193736 194509 R TIGRFAM: cell division protein FtsN; PFAM: sporulation domain protein; KEGG: eca:ECA4260 cell division protein FtsN; cell division protein FtsN complement(193736..194509) Pectobacterium wasabiae WPP163 8528531 YP_003257644.1 CDS Pecwa_0182 NC_013421.1 194700 195743 R negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; DNA-binding transcriptional regulator CytR complement(194700..195743) Pectobacterium wasabiae WPP163 8528532 YP_003257645.1 CDS Pecwa_0183 NC_013421.1 196014 198212 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(196014..198212) Pectobacterium wasabiae WPP163 8528533 YP_003257646.1 CDS rpmE NC_013421.1 198504 198719 D RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 198504..198719 Pectobacterium wasabiae WPP163 8528534 YP_003257647.1 CDS Pecwa_0185 NC_013421.1 198791 199804 R PFAM: transporter permease; KEGG: pct:PC1_0173 transporter permease; transporter permease complement(198791..199804) Pectobacterium wasabiae WPP163 8528535 YP_003257648.1 CDS Pecwa_0186 NC_013421.1 199801 200763 R PFAM: periplasmic binding protein; KEGG: pct:PC1_0174 periplasmic binding protein; periplasmic binding protein complement(199801..200763) Pectobacterium wasabiae WPP163 8528536 YP_003257649.1 CDS Pecwa_0187 NC_013421.1 200773 201570 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA4254 iron(III) ABC transporter ATP-binding protein; ABC transporter complement(200773..201570) Pectobacterium wasabiae WPP163 8528537 YP_003257650.1 CDS Pecwa_0188 NC_013421.1 201787 202104 R when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ complement(201787..202104) Pectobacterium wasabiae WPP163 8528538 YP_003257651.1 CDS Pecwa_0189 NC_013421.1 202174 203451 D catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 202174..203451 Pectobacterium wasabiae WPP163 8528539 YP_003257652.1 CDS metL NC_013421.1 203454 205889 D multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 203454..205889 Pectobacterium wasabiae WPP163 8528540 YP_003257653.1 CDS metF NC_013421.1 206237 207133 D MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 206237..207133 Pectobacterium wasabiae WPP163 8528541 YP_003257654.1 CDS Pecwa_0192 NC_013421.1 207250 207432 D hypothetical protein 207250..207432 Pectobacterium wasabiae WPP163 8528542 YP_003257655.1 CDS Pecwa_0193 NC_013421.1 207623 208531 D Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; OxyR family transcriptional regulator 207623..208531 Pectobacterium wasabiae WPP163 8528543 YP_003257656.1 CDS Pecwa_0194 NC_013421.1 208523 209929 R catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase complement(208523..209929) Pectobacterium wasabiae WPP163 8528544 YP_003257657.1 CDS Pecwa_0195 NC_013421.1 210129 210770 D negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; FabR family transcriptional regulator 210129..210770 Pectobacterium wasabiae WPP163 8528545 YP_003257658.1 CDS Pecwa_0196 NC_013421.1 210794 211180 D PFAM: protein of unknown function DUF1422; KEGG: eca:ECA4240 hypothetical protein; hypothetical protein 210794..211180 Pectobacterium wasabiae WPP163 8528546 YP_003257659.1 CDS Pecwa_0197 NC_013421.1 211222 212325 R catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase complement(211222..212325) Pectobacterium wasabiae WPP163 8528547 YP_003257660.1 CDS btuB NC_013421.1 212872 214767 D involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter 212872..214767 Pectobacterium wasabiae WPP163 8528548 YP_003257661.1 CDS Pecwa_0199 NC_013421.1 214712 215569 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 214712..215569 Pectobacterium wasabiae WPP163 8528549 YP_003257662.1 CDS murB NC_013421.1 221429 222466 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 221429..222466 Pectobacterium wasabiae WPP163 8528554 YP_003257663.1 CDS Pecwa_0201 NC_013421.1 222463 223422 D catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 222463..223422 Pectobacterium wasabiae WPP163 8528555 YP_003257664.1 CDS Pecwa_0202 NC_013421.1 223451 224401 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(223451..224401) Pectobacterium wasabiae WPP163 8528556 YP_003257665.1 CDS Pecwa_0203 NC_013421.1 225620 226804 D TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: pct:PC1_3827 translation elongation factor Tu; translation elongation factor Tu 225620..226804 Pectobacterium wasabiae WPP163 8528561 YP_003257666.1 CDS secE NC_013421.1 227042 227425 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 227042..227425 Pectobacterium wasabiae WPP163 8528562 YP_003257667.1 CDS nusG NC_013421.1 227427 227972 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 227427..227972 Pectobacterium wasabiae WPP163 8528563 YP_003257668.1 CDS rplK NC_013421.1 228135 228563 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 228135..228563 Pectobacterium wasabiae WPP163 8528564 YP_003257669.1 CDS rplA NC_013421.1 228567 229271 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 228567..229271 Pectobacterium wasabiae WPP163 8528565 YP_003257670.1 CDS rplJ NC_013421.1 229589 230086 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 229589..230086 Pectobacterium wasabiae WPP163 8528566 YP_003257671.1 CDS Pecwa_0209 NC_013421.1 230153 230518 D TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12; KEGG: pct:PC1_0204 ribosomal protein L7/L12; 50S ribosomal protein L7/L12 230153..230518 Pectobacterium wasabiae WPP163 8528567 YP_003257672.1 CDS rpoB NC_013421.1 230846 234874 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 230846..234874 Pectobacterium wasabiae WPP163 8528568 YP_003257673.1 CDS Pecwa_0211 NC_013421.1 234981 239204 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 234981..239204 Pectobacterium wasabiae WPP163 8528569 YP_003257674.1 CDS Pecwa_0212 NC_013421.1 239529 240926 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA0225 shikimate transporter; shikimate transporter 239529..240926 Pectobacterium wasabiae WPP163 8528570 YP_003257675.1 CDS Pecwa_0213 NC_013421.1 240995 241186 R PFAM: protein of unknown function DUF1127; KEGG: pct:PC1_0208 hypothetical protein; hypothetical protein complement(240995..241186) Pectobacterium wasabiae WPP163 8528571 YP_003257676.1 CDS Pecwa_0214 NC_013421.1 241360 242796 D PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0227 GntR family transcriptional regulator; GntR family transcriptional regulator 241360..242796 Pectobacterium wasabiae WPP163 8528572 YP_003257677.1 CDS thiH NC_013421.1 243180 244301 R in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH complement(243180..244301) Pectobacterium wasabiae WPP163 8528573 YP_003257678.1 CDS thiG NC_013421.1 244301 245083 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(244301..245083) Pectobacterium wasabiae WPP163 8528574 YP_003257679.1 CDS Pecwa_0217 NC_013421.1 245085 245285 R with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS complement(245085..245285) Pectobacterium wasabiae WPP163 8528575 YP_003257680.1 CDS Pecwa_0218 NC_013421.1 245282 246061 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: eca:ECA0230 thiamine biosynthesis protein ThiF; UBA/THIF-type NAD/FAD binding protein complement(245282..246061) Pectobacterium wasabiae WPP163 8528576 YP_003257681.1 CDS Pecwa_0219 NC_013421.1 246063 246704 R catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase complement(246063..246704) Pectobacterium wasabiae WPP163 8528577 YP_003257682.1 CDS Pecwa_0220 NC_013421.1 246701 248641 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(246701..248641) Pectobacterium wasabiae WPP163 8528578 YP_003257683.1 CDS Pecwa_0221 NC_013421.1 249031 249492 R binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor complement(249031..249492) Pectobacterium wasabiae WPP163 8528579 YP_003257684.1 CDS nudC NC_013421.1 249601 250383 D can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 249601..250383 Pectobacterium wasabiae WPP163 8528580 YP_003257685.1 CDS hemE NC_013421.1 250500 251564 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 250500..251564 Pectobacterium wasabiae WPP163 8528581 YP_003257686.1 CDS Pecwa_0224 NC_013421.1 251580 252269 D Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; endonuclease V 251580..252269 Pectobacterium wasabiae WPP163 8528582 YP_003257687.1 CDS Pecwa_0225 NC_013421.1 252347 252937 D PFAM: protein of unknown function DUF416; KEGG: pct:PC1_0221 hypothetical protein; hypothetical protein 252347..252937 Pectobacterium wasabiae WPP163 8528583 YP_003257688.1 CDS Pecwa_0226 NC_013421.1 253142 253414 D histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 253142..253414 Pectobacterium wasabiae WPP163 8528584 YP_003257689.1 CDS Pecwa_0227 NC_013421.1 253419 254102 D PFAM: protein of unknown function DUF1481; KEGG: eca:ECA0239 lipoprotein; hypothetical protein 253419..254102 Pectobacterium wasabiae WPP163 8528585 YP_003257690.1 CDS Pecwa_0228 NC_013421.1 254170 255456 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(254170..255456) Pectobacterium wasabiae WPP163 8528586 YP_003257691.1 CDS purH NC_013421.1 255474 257063 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(255474..257063) Pectobacterium wasabiae WPP163 8528587 YP_003257692.1 CDS Pecwa_0230 NC_013421.1 263184 263945 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_0226 ABC transporter; ABC transporter complement(263184..263945) Pectobacterium wasabiae WPP163 8528592 YP_003257693.1 CDS Pecwa_0231 NC_013421.1 263954 265048 R TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0243 L-amino acid ABC transporter permease; polar amino acid ABC transporter inner membrane protein complement(263954..265048) Pectobacterium wasabiae WPP163 8528593 YP_003257694.1 CDS Pecwa_0232 NC_013421.1 265058 266236 R TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0244 L-amino acid ABC transporter permease; polar amino acid ABC transporter inner membrane protein complement(265058..266236) Pectobacterium wasabiae WPP163 8528594 YP_003257695.1 CDS Pecwa_0233 NC_013421.1 266303 267328 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pct:PC1_0229 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(266303..267328) Pectobacterium wasabiae WPP163 8528595 YP_003257696.1 CDS Pecwa_0234 NC_013421.1 267714 268379 R TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0246 amino-acid transporter permease protein; polar amino acid ABC transporter inner membrane protein complement(267714..268379) Pectobacterium wasabiae WPP163 8528596 YP_003257697.1 CDS Pecwa_0235 NC_013421.1 268468 269235 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA0247 cystine-binding periplasmic protein; family 3 extracellular solute-binding protein complement(268468..269235) Pectobacterium wasabiae WPP163 8528597 YP_003257698.1 CDS Pecwa_0236 NC_013421.1 269529 270674 D PFAM: endonuclease/exonuclease/phosphatase; KEGG: eca:ECA0251 endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase 269529..270674 Pectobacterium wasabiae WPP163 8528598 YP_003257699.1 CDS Pecwa_0238 NC_013421.1 271343 271726 D KEGG: yen:YE2358 hypothetical protein; hypothetical protein 271343..271726 Pectobacterium wasabiae WPP163 8528600 YP_003257700.1 CDS Pecwa_0239 NC_013421.1 271882 272277 D KEGG: pay:PAU_02290 hypothetical protein; hypothetical protein 271882..272277 Pectobacterium wasabiae WPP163 8528601 YP_003257701.1 CDS fis NC_013421.1 272607 272903 R Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis complement(272607..272903) Pectobacterium wasabiae WPP163 8528602 YP_003257702.1 CDS Pecwa_0241 NC_013421.1 272927 273892 R TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase; KEGG: eca:ECA0256 tRNA-dihydrouridine synthase B; tRNA-dihydrouridine synthase B complement(272927..273892) Pectobacterium wasabiae WPP163 8528603 YP_003257703.1 CDS Pecwa_0242 NC_013421.1 274250 274984 R PFAM: carbonic anhydrase; KEGG: eca:ECA0257 carbonic anhydrase; carbonic anhydrase complement(274250..274984) Pectobacterium wasabiae WPP163 8528604 YP_003257704.1 CDS prmA NC_013421.1 275166 276053 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase complement(275166..276053) Pectobacterium wasabiae WPP163 8528605 YP_003257705.1 CDS panF NC_013421.1 276071 277522 R mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter complement(276071..277522) Pectobacterium wasabiae WPP163 8528606 YP_003257706.1 CDS Pecwa_0245 NC_013421.1 277512 277754 R PFAM: protein of unknown function DUF997; KEGG: pct:PC1_0241 hypothetical protein; hypothetical protein complement(277512..277754) Pectobacterium wasabiae WPP163 8528607 YP_003257707.1 CDS Pecwa_0246 NC_013421.1 278442 278870 D PFAM: TOBE domain protein; KEGG: pct:PC1_0242 TOBE domain protein; TOBE domain-containing protein 278442..278870 Pectobacterium wasabiae WPP163 8528608 YP_003257708.1 CDS Pecwa_0247 NC_013421.1 279140 280177 D PFAM: periplasmic binding protein; KEGG: pmr:PMI2675 iron compound ABC transporter substrate-binding protein; periplasmic binding protein 279140..280177 Pectobacterium wasabiae WPP163 8528609 YP_003257709.1 CDS Pecwa_0248 NC_013421.1 280174 281169 D PFAM: transporter permease; ABC-3 protein; KEGG: pmr:PMI2676 iron compound ABC transporter permease; transporter permease 280174..281169 Pectobacterium wasabiae WPP163 8528610 YP_003257710.1 CDS Pecwa_0249 NC_013421.1 281166 281924 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pmr:PMI2677 iron compound ABC transporter ATP-binding protein; ABC transporter 281166..281924 Pectobacterium wasabiae WPP163 8528611 YP_003257711.1 CDS Pecwa_0250 NC_013421.1 281971 282792 D KEGG: pmr:PMI2678 hypothetical protein; hypothetical protein 281971..282792 Pectobacterium wasabiae WPP163 8528612 YP_003257712.1 CDS Pecwa_0251 NC_013421.1 282789 283637 D involved in molybdenum transport; molybdenum transporter ModD 282789..283637 Pectobacterium wasabiae WPP163 8528613 YP_003257713.1 CDS Pecwa_0252 NC_013421.1 283734 285725 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cko:CKO_01203 hypothetical protein; TonB-dependent receptor 283734..285725 Pectobacterium wasabiae WPP163 8528614 YP_003257714.1 CDS Pecwa_0253 NC_013421.1 285790 287133 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(285790..287133) Pectobacterium wasabiae WPP163 8528615 YP_003257715.1 CDS Pecwa_0254 NC_013421.1 287145 287612 R composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(287145..287612) Pectobacterium wasabiae WPP163 8528616 YP_003257716.1 CDS Pecwa_0255 NC_013421.1 287637 288089 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(287637..288089) Pectobacterium wasabiae WPP163 8528617 YP_003257717.1 CDS Pecwa_0256 NC_013421.1 288331 288930 R in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ complement(288331..288930) Pectobacterium wasabiae WPP163 8528618 YP_003257718.1 CDS Pecwa_0257 NC_013421.1 288967 289968 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY complement(288967..289968) Pectobacterium wasabiae WPP163 8528619 YP_003257719.1 CDS Pecwa_0258 NC_013421.1 290252 290776 R hypothetical protein complement(290252..290776) Pectobacterium wasabiae WPP163 8528620 YP_003257720.1 CDS Pecwa_0259 NC_013421.1 290869 291393 R hypothetical protein complement(290869..291393) Pectobacterium wasabiae WPP163 8528621 YP_003257721.1 CDS Pecwa_0260 NC_013421.1 291662 292639 R TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: eca:ECA0265 zinc-binding oxidoreductase; YhdH/YhfP family quinone oxidoreductase complement(291662..292639) Pectobacterium wasabiae WPP163 8528622 YP_003257722.1 CDS Pecwa_0261 NC_013421.1 292666 292815 D KEGG: pct:PC1_0250 hypothetical protein; hypothetical protein 292666..292815 Pectobacterium wasabiae WPP163 8528623 YP_003257723.1 CDS Pecwa_0262 NC_013421.1 292948 294885 D regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; CsrD family transcriptional regulator 292948..294885 Pectobacterium wasabiae WPP163 8528624 YP_003257724.1 CDS Pecwa_0264 NC_013421.1 296410 297393 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 296410..297393 Pectobacterium wasabiae WPP163 8528626 YP_003257725.1 CDS Pecwa_0265 NC_013421.1 297390 297878 D part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD 297390..297878 Pectobacterium wasabiae WPP163 8528627 YP_003257726.1 CDS Pecwa_0266 NC_013421.1 297887 298480 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 297887..298480 Pectobacterium wasabiae WPP163 8528628 YP_003257727.1 CDS Pecwa_0267 NC_013421.1 298470 299939 D involved in the processing of the 5'end of 16S rRNA; ribonuclease G 298470..299939 Pectobacterium wasabiae WPP163 8528629 YP_003257728.1 CDS Pecwa_0268 NC_013421.1 299981 303811 D KEGG: eca:ECA0272 hypothetical protein; hypothetical protein 299981..303811 Pectobacterium wasabiae WPP163 8528630 YP_003257729.1 CDS tldD NC_013421.1 303868 305313 D responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; protease TldD 303868..305313 Pectobacterium wasabiae WPP163 8528631 YP_003257730.1 CDS Pecwa_0270 NC_013421.1 305345 306289 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0276 DNA-binding transcriptional regulator; DNA-binding transcriptional regulator complement(305345..306289) Pectobacterium wasabiae WPP163 8528632 YP_003257731.1 CDS Pecwa_0271 NC_013421.1 306650 306853 D membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein 306650..306853 Pectobacterium wasabiae WPP163 8528633 YP_003257732.1 CDS Pecwa_0272 NC_013421.1 306861 307826 D with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeA 306861..307826 Pectobacterium wasabiae WPP163 8528634 YP_003257733.1 CDS Pecwa_0273 NC_013421.1 307838 309826 D with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB 307838..309826 Pectobacterium wasabiae WPP163 8528635 YP_003257734.1 CDS Pecwa_0274 NC_013421.1 309879 310430 R PFAM: protein of unknown function DUF615; KEGG: pct:PC1_0266 hypothetical protein; hypothetical protein complement(309879..310430) Pectobacterium wasabiae WPP163 8528636 YP_003257735.1 CDS Pecwa_0275 NC_013421.1 310798 312138 D protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA 310798..312138 Pectobacterium wasabiae WPP163 8528637 YP_003257736.1 CDS Pecwa_0276 NC_013421.1 312210 312620 R Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator complement(312210..312620) Pectobacterium wasabiae WPP163 8528638 YP_003257737.1 CDS Pecwa_0277 NC_013421.1 312774 313046 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: pct:PC1_0270 phosphotransferase system, phosphocarrier protein HPr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) complement(312774..313046) Pectobacterium wasabiae WPP163 8528639 YP_003257738.1 CDS Pecwa_0278 NC_013421.1 313078 313935 R PFAM: conserved hypothetical protein; KEGG: pct:PC1_0271 hypothetical protein; hypothetical protein complement(313078..313935) Pectobacterium wasabiae WPP163 8528640 YP_003257739.1 CDS Pecwa_0279 NC_013421.1 314090 314563 R TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: eca:ECA0286 PTS IIA-like nitrogen-regulatory protein PtsN; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(314090..314563) Pectobacterium wasabiae WPP163 8528641 YP_003257740.1 CDS Pecwa_0280 NC_013421.1 314644 314931 R YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; sigma(54) modulation protein complement(314644..314931) Pectobacterium wasabiae WPP163 8528642 YP_003257741.1 CDS Pecwa_0281 NC_013421.1 314955 316388 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(314955..316388) Pectobacterium wasabiae WPP163 8528643 YP_003257742.1 CDS Pecwa_0282 NC_013421.1 316438 317163 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_0275 ABC transporter; ABC transporter ATP-binding protein complement(316438..317163) Pectobacterium wasabiae WPP163 8528644 YP_003257743.1 CDS Pecwa_0283 NC_013421.1 317167 317739 R LptA; periplasmic binding protein part of a ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; lipopolysaccharide transport periplasmic protein LptA complement(317167..317739) Pectobacterium wasabiae WPP163 8528645 YP_003257744.1 CDS Pecwa_0284 NC_013421.1 317720 318286 R PFAM: protein of unknown function DUF1239; KEGG: eca:ECA0291 hypothetical protein; hypothetical protein complement(317720..318286) Pectobacterium wasabiae WPP163 8528646 YP_003257745.1 CDS Pecwa_0285 NC_013421.1 318283 318849 R forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(318283..318849) Pectobacterium wasabiae WPP163 8528647 YP_003257746.1 CDS Pecwa_0286 NC_013421.1 318869 319906 R KEGG: eca:ECA0293 D-arabinose 5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; D-arabinose 5-phosphate isomerase complement(318869..319906) Pectobacterium wasabiae WPP163 8528648 YP_003257747.1 CDS Pecwa_0287 NC_013421.1 319947 320912 R YrbG; inner membrane protein involved in cell envelope integrity; sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; calcium/sodium:proton antiporter complement(319947..320912) Pectobacterium wasabiae WPP163 8528649 YP_003257748.1 CDS Pecwa_0288 NC_013421.1 321300 322112 D ATP-binding subunit of a ABC toluene efflux transporter; ABC transporter ATP-binding protein 321300..322112 Pectobacterium wasabiae WPP163 8528650 YP_003257749.1 CDS Pecwa_0289 NC_013421.1 322120 322902 D PFAM: protein of unknown function DUF140; KEGG: pct:PC1_0282 hypothetical protein; hypothetical protein 322120..322902 Pectobacterium wasabiae WPP163 8528651 YP_003257750.1 CDS Pecwa_0290 NC_013421.1 322907 323473 D PFAM: hypothetical protein; KEGG: pct:PC1_0283 mammalian cell entry related domain protein; hypothetical protein 322907..323473 Pectobacterium wasabiae WPP163 8528652 YP_003257751.1 CDS Pecwa_0291 NC_013421.1 323486 324115 D PFAM: toluene tolerance family protein; KEGG: eca:ECA0298 hypothetical protein; toluene tolerance family protein 323486..324115 Pectobacterium wasabiae WPP163 8528653 YP_003257752.1 CDS Pecwa_0292 NC_013421.1 324129 324419 D KEGG: eca:ECA0299 hypothetical protein; hypothetical protein 324129..324419 Pectobacterium wasabiae WPP163 8528654 YP_003257753.1 CDS Pecwa_0293 NC_013421.1 324543 324797 D PFAM: BolA family protein; KEGG: pct:PC1_0286 BolA family protein; BolA family protein 324543..324797 Pectobacterium wasabiae WPP163 8528655 YP_003257754.1 CDS Pecwa_0294 NC_013421.1 324878 326140 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 324878..326140 Pectobacterium wasabiae WPP163 8528656 YP_003257755.1 CDS Pecwa_0295 NC_013421.1 326246 327343 R KEGG: eca:ECA0302 serine endoprotease; TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; serine endoprotease complement(326246..327343) Pectobacterium wasabiae WPP163 8528657 YP_003257756.1 CDS Pecwa_0296 NC_013421.1 327479 328849 R KEGG: eca:ECA0303 exported protease; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do complement(327479..328849) Pectobacterium wasabiae WPP163 8528658 YP_003257757.1 CDS Pecwa_0297 NC_013421.1 329097 329501 R PFAM: protein of unknown function DUF1043; KEGG: pct:PC1_0290 hypothetical protein; cytochrome d ubiquinol oxidase subunit III complement(329097..329501) Pectobacterium wasabiae WPP163 8528659 YP_003257758.1 CDS Pecwa_0298 NC_013421.1 329717 330868 D PFAM: AFG1-family ATPase; KEGG: pct:PC1_0291 AFG1-family ATPase; AFG1 family ATPase 329717..330868 Pectobacterium wasabiae WPP163 8528660 YP_003257759.1 CDS rplM NC_013421.1 331105 331533 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 331105..331533 Pectobacterium wasabiae WPP163 8528661 YP_003257760.1 CDS rpsI NC_013421.1 331549 331941 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 331549..331941 Pectobacterium wasabiae WPP163 8528662 YP_003257761.1 CDS sspA NC_013421.1 332269 332910 D transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 332269..332910 Pectobacterium wasabiae WPP163 8528663 YP_003257762.1 CDS Pecwa_0302 NC_013421.1 332916 333419 D PFAM: stringent starvation protein B; KEGG: eca:ECA0309 ClpXP protease specificity-enhancing factor; ClpXP protease specificity-enhancing factor 332916..333419 Pectobacterium wasabiae WPP163 8528664 YP_003257763.1 CDS Pecwa_0303 NC_013421.1 333495 334268 R TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eca:ECA0310 acetoin reductase; acetoin reductase complement(333495..334268) Pectobacterium wasabiae WPP163 8528665 YP_003257764.1 CDS gltD NC_013421.1 334516 335934 R glutamate synthase is composed of subunits alpha and beta; subunit beta is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the subunit alpha, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(334516..335934) Pectobacterium wasabiae WPP163 8528666 YP_003257765.1 CDS gltB NC_013421.1 335944 340404 R catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha complement(335944..340404) Pectobacterium wasabiae WPP163 8528667 YP_003257766.1 CDS Pecwa_0306 NC_013421.1 341056 341985 D KEGG: eca:ECA0313 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 341056..341985 Pectobacterium wasabiae WPP163 8528668 YP_003257767.1 CDS Pecwa_0307 NC_013421.1 342104 344473 D sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB 342104..344473 Pectobacterium wasabiae WPP163 8528669 YP_003257768.1 CDS Pecwa_0308 NC_013421.1 344980 345636 D PFAM: ThiJ/PfpI domain protein; KEGG: pct:PC1_0302 ThiJ/PfpI domain protein; isoprenoid biosynthesis protein 344980..345636 Pectobacterium wasabiae WPP163 8528670 YP_003257769.1 CDS mtgA NC_013421.1 345666 346367 D glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 345666..346367 Pectobacterium wasabiae WPP163 8528671 YP_003257770.1 CDS Pecwa_0310 NC_013421.1 346439 347734 D KEGG: pct:PC1_0304 hypothetical protein; hypothetical protein 346439..347734 Pectobacterium wasabiae WPP163 8528672 YP_003257771.1 CDS Pecwa_0311 NC_013421.1 347839 348411 R PFAM: transport-associated; SMART: transport-associated and nodulation region; KEGG: eca:ECA0319 hypothetical protein; hypothetical protein complement(347839..348411) Pectobacterium wasabiae WPP163 8528673 YP_003257772.1 CDS Pecwa_0312 NC_013421.1 348423 349013 R Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; DnaA initiator-associating protein DiaA complement(348423..349013) Pectobacterium wasabiae WPP163 8528674 YP_003257773.1 CDS Pecwa_0313 NC_013421.1 349055 349411 R PFAM: protein of unknown function UPF0102; KEGG: pct:PC1_0307 hypothetical protein; hypothetical protein complement(349055..349411) Pectobacterium wasabiae WPP163 8528675 YP_003257774.1 CDS Pecwa_0314 NC_013421.1 349408 351426 R PFAM: LppC family lipoprotein; KEGG: pct:PC1_0308 LppC family lipoprotein; LppC family lipoprotein complement(349408..351426) Pectobacterium wasabiae WPP163 8528676 YP_003257775.1 CDS Pecwa_0315 NC_013421.1 351488 352375 D PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA0323 tetrapyrrole methylase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 351488..352375 Pectobacterium wasabiae WPP163 8528677 YP_003257776.1 CDS Pecwa_0316 NC_013421.1 353623 354255 D KEGG: yen:YE1937 hypothetical protein; hypothetical protein 353623..354255 Pectobacterium wasabiae WPP163 8528679 YP_003257777.1 CDS Pecwa_0317 NC_013421.1 354263 354595 D KEGG: yps:YPTB0567 hypothetical protein; hypothetical protein 354263..354595 Pectobacterium wasabiae WPP163 8528680 YP_003257778.1 CDS Pecwa_0318 NC_013421.1 354876 355130 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: eca:ECA0325 plasmid stability protein; prevent-host-death family protein 354876..355130 Pectobacterium wasabiae WPP163 8528681 YP_003257779.1 CDS Pecwa_0319 NC_013421.1 355120 355407 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: eca:ECA0326 plasmid stability protein; RelE/StbE family addiction module toxin 355120..355407 Pectobacterium wasabiae WPP163 8528682 YP_003257780.1 CDS Pecwa_0320 NC_013421.1 355586 356374 D seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; hypothetical protein 355586..356374 Pectobacterium wasabiae WPP163 8528683 YP_003257781.1 CDS Pecwa_0321 NC_013421.1 356462 357622 R PFAM: glutathionylspermidine synthase; KEGG: eca:ECA0328 glutathionylspermidine synthase; glutathionylspermidine synthase complement(356462..357622) Pectobacterium wasabiae WPP163 8528684 YP_003257782.1 CDS Pecwa_0322 NC_013421.1 357634 358302 R PFAM: protein of unknown function DUF1190; KEGG: pct:PC1_0312 hypothetical protein; hypothetical protein complement(357634..358302) Pectobacterium wasabiae WPP163 8528685 YP_003257783.1 CDS tolC NC_013421.1 358585 359976 R trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein complement(358585..359976) Pectobacterium wasabiae WPP163 8528686 YP_003257784.1 CDS nudF NC_013421.1 360315 360947 D ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase NudF 360315..360947 Pectobacterium wasabiae WPP163 8528687 YP_003257785.1 CDS Pecwa_0325 NC_013421.1 360952 361383 D PFAM: protein of unknown function DUF1249; KEGG: pct:PC1_0316 hypothetical protein; hypothetical protein 360952..361383 Pectobacterium wasabiae WPP163 8528688 YP_003257786.1 CDS Pecwa_0326 NC_013421.1 361490 362317 D PFAM: calcineurin phosphoesterase; metallophosphoesterase; KEGG: pct:PC1_0317 calcineurin phosphoesterase domain protein; cyclic 3',5'-adenosine monophosphate phosphodiesterase 361490..362317 Pectobacterium wasabiae WPP163 8528689 YP_003257787.1 CDS Pecwa_0327 NC_013421.1 362317 362898 D Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YqiA 362317..362898 Pectobacterium wasabiae WPP163 8528690 YP_003257788.1 CDS Pecwa_0328 NC_013421.1 362983 364878 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 362983..364878 Pectobacterium wasabiae WPP163 8528691 YP_003257789.1 CDS Pecwa_0329 NC_013421.1 364921 365817 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_0321 LysR family transcriptional regulator; LysR family transcriptional regulator 364921..365817 Pectobacterium wasabiae WPP163 8528692 YP_003257790.1 CDS Pecwa_0330 NC_013421.1 365858 366439 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eca:ECA0337 modulator of drug activity B; NAD(P)H dehydrogenase (quinone) complement(365858..366439) Pectobacterium wasabiae WPP163 8528693 YP_003257791.1 CDS Pecwa_0331 NC_013421.1 366646 367506 R KEGG: eca:ECA0338 hypothetical protein; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; hypothetical protein complement(366646..367506) Pectobacterium wasabiae WPP163 8528694 YP_003257792.1 CDS Pecwa_0332 NC_013421.1 367596 368447 R PFAM: ketose-bisphosphate aldolase class-II; KEGG: eca:ECA0339 sugar-bisphosphate aldolase; tagatose-bisphosphate aldolase complement(367596..368447) Pectobacterium wasabiae WPP163 8528695 YP_003257793.1 CDS Pecwa_0333 NC_013421.1 368459 369550 R TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; KEGG: eca:ECA0340 PTS system, IIBC component; PTS system fructose subfamily transporter subunit IIC complement(368459..369550) Pectobacterium wasabiae WPP163 8528696 YP_003257794.1 CDS Pecwa_0334 NC_013421.1 369576 369890 R TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; KEGG: pct:PC1_0326 PTS system, fructose-specific, IIB subunnit; PTS system fructose-specific transporter subunit IIB complement(369576..369890) Pectobacterium wasabiae WPP163 8528697 YP_003257795.1 CDS Pecwa_0335 NC_013421.1 369904 370383 R TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: pct:PC1_0327 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(369904..370383) Pectobacterium wasabiae WPP163 8528698 YP_003257796.1 CDS Pecwa_0336 NC_013421.1 370432 371982 R PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; M trans-acting positive regulator; regulatory protein DeoR; KEGG: eca:ECA0343 PTS system regulatory protein; transcriptional antiterminator BglG complement(370432..371982) Pectobacterium wasabiae WPP163 8528699 YP_003257797.1 CDS Pecwa_0337 NC_013421.1 372400 374802 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pct:PC1_0329 TonB-dependent receptor; TonB-dependent receptor complement(372400..374802) Pectobacterium wasabiae WPP163 8528700 YP_003257798.1 CDS Pecwa_0338 NC_013421.1 375022 375525 D KEGG: pct:PC1_0331 hypothetical protein; hypothetical protein 375022..375525 Pectobacterium wasabiae WPP163 8528701 YP_003257799.1 CDS Pecwa_0339 NC_013421.1 375698 377968 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 375698..377968 Pectobacterium wasabiae WPP163 8528702 YP_003257800.1 CDS Pecwa_0340 NC_013421.1 378113 378850 D KEGG: pct:PC1_0333 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 378113..378850 Pectobacterium wasabiae WPP163 8528703 YP_003257801.1 CDS Pecwa_0341 NC_013421.1 379005 380420 D PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: pct:PC1_0334 multicopper oxidase type 3; repressor protein for FtsI 379005..380420 Pectobacterium wasabiae WPP163 8528704 YP_003257802.1 CDS Pecwa_0342 NC_013421.1 380743 381480 D PFAM: UbiC transcription regulator-associated domain protein; regulatory protein Crp; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0348 GntR family transcriptional regulator; GntR family transcriptional regulator 380743..381480 Pectobacterium wasabiae WPP163 8528705 YP_003257803.1 CDS dkgA NC_013421.1 381523 382350 R methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; 2,5-diketo-D-gluconate reductase A complement(381523..382350) Pectobacterium wasabiae WPP163 8528706 YP_003257804.1 CDS Pecwa_0344 NC_013421.1 382906 383424 D TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: pct:PC1_0054 type VI secretion system effector, Hcp1 family; type VI secretion system effector 382906..383424 Pectobacterium wasabiae WPP163 8528707 YP_003257805.1 CDS Pecwa_0345 NC_013421.1 383546 385405 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 rhs accessory genetic element; ImpA family type VI secretion-associated protein 383546..385405 Pectobacterium wasabiae WPP163 8528708 YP_003257806.1 CDS Pecwa_0346 NC_013421.1 385472 385912 D PFAM: Domain of unknown function DUF1795; KEGG: eta:ETA_30010 hypothetical protein; hypothetical protein 385472..385912 Pectobacterium wasabiae WPP163 8528709 YP_003257807.1 CDS Pecwa_0347 NC_013421.1 385930 390069 D TIGRFAM: hypothetical protein; PFAM: RHS protein; PAAR repeat-containing protein; hypothetical protein; KEGG: eta:ETA_08660 rhs family protein; hypothetical protein 385930..390069 Pectobacterium wasabiae WPP163 8528710 YP_003257808.1 CDS Pecwa_0348 NC_013421.1 390074 390418 D hypothetical protein 390074..390418 Pectobacterium wasabiae WPP163 8528711 YP_003257809.1 CDS Pecwa_0350 NC_013421.1 390648 391571 D PFAM: RHS protein; KEGG: eta:ETA_30000 membrane-bound sugar-binding protein; RHS protein 390648..391571 Pectobacterium wasabiae WPP163 8528713 YP_003257810.1 CDS Pecwa_0351 NC_013421.1 391581 392000 D hypothetical protein 391581..392000 Pectobacterium wasabiae WPP163 8528714 YP_003257811.1 CDS Pecwa_0353 NC_013421.1 392613 392933 D hypothetical protein 392613..392933 Pectobacterium wasabiae WPP163 8528716 YP_003257812.1 CDS Pecwa_0354 NC_013421.1 393088 393399 R PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: sfv:SFV_0629 hypothetical protein; hypothetical protein complement(393088..393399) Pectobacterium wasabiae WPP163 8528717 YP_003257813.1 CDS Pecwa_0355 NC_013421.1 393473 393742 R KEGG: plu:plu3590 hypothetical protein; hypothetical protein complement(393473..393742) Pectobacterium wasabiae WPP163 8528718 YP_003257814.1 CDS Pecwa_0356 NC_013421.1 394684 394947 D KEGG: bxe:Bxe_B1285 hypothetical protein; hypothetical protein 394684..394947 Pectobacterium wasabiae WPP163 8528719 YP_003257815.1 CDS Pecwa_0357 NC_013421.1 394971 395207 D KEGG: bxe:Bxe_B1286 hypothetical protein; hypothetical protein 394971..395207 Pectobacterium wasabiae WPP163 8528720 YP_003257816.1 CDS Pecwa_0358 NC_013421.1 395320 395694 D hypothetical protein 395320..395694 Pectobacterium wasabiae WPP163 8528721 YP_003257817.1 CDS Pecwa_0360 NC_013421.1 395922 396842 D PFAM: guanine-specific ribonuclease N1 and T1; RHS protein; KEGG: eta:ETA_30000 membrane-bound sugar-binding protein; guanine-specific ribonuclease N1 and T1 395922..396842 Pectobacterium wasabiae WPP163 8528723 YP_003257818.1 CDS Pecwa_0361 NC_013421.1 396842 397174 D PFAM: Barstar (barnase inhibitor); KEGG: rlg:Rleg_3292 barstar (barnase inhibitor); barnase inhibitor 396842..397174 Pectobacterium wasabiae WPP163 8528724 YP_003257819.1 CDS Pecwa_0364 NC_013421.1 398262 398594 D KEGG: pfl:PFL_2671 hypothetical protein; hypothetical protein 398262..398594 Pectobacterium wasabiae WPP163 8528727 YP_003257820.1 CDS Pecwa_0367 NC_013421.1 400312 400707 D KEGG: esa:ESA_03890 hypothetical protein; hypothetical protein 400312..400707 Pectobacterium wasabiae WPP163 8528730 YP_003257821.1 CDS Pecwa_0368 NC_013421.1 400837 401688 D KEGG: pct:PC1_0051 hypothetical protein; hypothetical protein 400837..401688 Pectobacterium wasabiae WPP163 8528731 YP_003257822.1 CDS Pecwa_0369 NC_013421.1 401654 402121 D hypothetical protein 401654..402121 Pectobacterium wasabiae WPP163 8528732 YP_003257823.1 CDS Pecwa_0372 NC_013421.1 403391 403915 D hypothetical protein 403391..403915 Pectobacterium wasabiae WPP163 8528735 YP_003257824.1 CDS Pecwa_0373 NC_013421.1 404039 404305 D KEGG: eca:ECA2869 rhs protein; hypothetical protein 404039..404305 Pectobacterium wasabiae WPP163 8528736 YP_003257825.1 CDS Pecwa_0374 NC_013421.1 404293 404508 D KEGG: bcj:BCAL1298 hypothetical protein; hypothetical protein 404293..404508 Pectobacterium wasabiae WPP163 8528737 YP_003257826.1 CDS Pecwa_0375 NC_013421.1 404524 404961 D KEGG: shw:Sputw3181_1019 hypothetical protein; hypothetical protein 404524..404961 Pectobacterium wasabiae WPP163 8528738 YP_003257827.1 CDS Pecwa_0376 NC_013421.1 405816 406259 D KEGG: plu:plu0353 hypothetical protein; hypothetical protein 405816..406259 Pectobacterium wasabiae WPP163 8528739 YP_003257828.1 CDS Pecwa_0377 NC_013421.1 406246 406575 D KEGG: pen:PSEEN4592 hypothetical protein; hypothetical protein 406246..406575 Pectobacterium wasabiae WPP163 8528740 YP_003257829.1 CDS Pecwa_0379 NC_013421.1 406922 407155 R PFAM: transposase IS3/IS911 family protein; KEGG: ent:Ent638_4321 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(406922..407155) Pectobacterium wasabiae WPP163 8528742 YP_003257830.1 CDS Pecwa_0380 NC_013421.1 407290 408453 R PFAM: iron-containing alcohol dehydrogenase; KEGG: eca:ECA0350 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(407290..408453) Pectobacterium wasabiae WPP163 8528743 YP_003257831.1 CDS Pecwa_0381 NC_013421.1 408457 409197 R PFAM: nitroreductase; KEGG: pct:PC1_0338 nitroreductase; nitroreductase complement(408457..409197) Pectobacterium wasabiae WPP163 8528744 YP_003257832.1 CDS Pecwa_0382 NC_013421.1 409385 410425 D PFAM: AraC-type transcriptional regulator; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA0352 AraC family transcription regulator; AraC family transcriptional regulator 409385..410425 Pectobacterium wasabiae WPP163 8528745 YP_003257833.1 CDS Pecwa_0383 NC_013421.1 410455 411114 R PFAM: SNARE associated Golgi protein; KEGG: eca:ECA0353 DedA family membrane protein; hypothetical protein complement(410455..411114) Pectobacterium wasabiae WPP163 8528746 YP_003257834.1 CDS Pecwa_0384 NC_013421.1 411431 412621 R catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase complement(411431..412621) Pectobacterium wasabiae WPP163 8528747 YP_003257835.1 CDS Pecwa_0385 NC_013421.1 412946 414238 R TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: eca:ECA0355 DedA family membrane protein; TRAP dicarboxylate transporter subunit DctM complement(412946..414238) Pectobacterium wasabiae WPP163 8528748 YP_003257836.1 CDS Pecwa_0386 NC_013421.1 414256 414762 R PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: eca:ECA0356 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ component complement(414256..414762) Pectobacterium wasabiae WPP163 8528749 YP_003257837.1 CDS Pecwa_0387 NC_013421.1 414888 415865 R TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: extracellular solute-binding protein, family 7, bacteria; KEGG: eca:ECA0357 substrate-binding periplasmic protein; TRAP dicarboxylate transporter subunit DctP complement(414888..415865) Pectobacterium wasabiae WPP163 8528750 YP_003257838.1 CDS Pecwa_0388 NC_013421.1 416537 417535 D TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: pct:PC1_0345 TonB-system energizer ExbB; tonB-system energizer ExbB 416537..417535 Pectobacterium wasabiae WPP163 8528751 YP_003257839.1 CDS Pecwa_0389 NC_013421.1 417539 417964 D membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transporter ExbD 417539..417964 Pectobacterium wasabiae WPP163 8528752 YP_003257840.1 CDS Pecwa_0390 NC_013421.1 418188 419207 R KEGG: ecr:ECIAI1_4101 hypothetical protein; hypothetical protein complement(418188..419207) Pectobacterium wasabiae WPP163 8528753 YP_003257841.1 CDS Pecwa_0391 NC_013421.1 419608 420627 R KEGG: eca:ECA0360 sucrose operon repressor; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(419608..420627) Pectobacterium wasabiae WPP163 8528754 YP_003257842.1 CDS Pecwa_0392 NC_013421.1 420658 422067 R KEGG: eca:ECA0361 sucrose-6-phosphate hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase complement(420658..422067) Pectobacterium wasabiae WPP163 8528755 YP_003257843.1 CDS Pecwa_0393 NC_013421.1 422064 423437 R TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: eca:ECA0362 PTS system, sucrose-specific IIBC component; PTS system sucrose-specific transporter subunit IIBC complement(422064..423437) Pectobacterium wasabiae WPP163 8528756 YP_003257844.1 CDS Pecwa_0394 NC_013421.1 423508 425067 R PFAM: porin; KEGG: pct:PC1_0350 porin; porin complement(423508..425067) Pectobacterium wasabiae WPP163 8528757 YP_003257845.1 CDS Pecwa_0395 NC_013421.1 425255 426190 R phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; aminoimidazole riboside kinase complement(425255..426190) Pectobacterium wasabiae WPP163 8528758 YP_003257846.1 CDS Pecwa_0396 NC_013421.1 426661 427212 D PFAM: protein of unknown function DUF583; KEGG: eca:ECA0365 hypothetical protein; hypothetical protein 426661..427212 Pectobacterium wasabiae WPP163 8528759 YP_003257847.1 CDS Pecwa_0397 NC_013421.1 427240 429963 D TIGRFAM: CRISPR-associated helicase Cas3; SMART: DEAD/DEAH box helicase; KEGG: dda:Dd703_3591 CRISPR-associated helicase Cas3; CRISPR-associated helicase Cas3 427240..429963 Pectobacterium wasabiae WPP163 8528760 YP_003257848.1 CDS Pecwa_0398 NC_013421.1 430597 432168 D TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; KEGG: dda:Dd703_3590 CRISPR-associated protein, CSE1 family; CRISPR-associated protein, Cse1 family 430597..432168 Pectobacterium wasabiae WPP163 8528761 YP_003257849.1 CDS Pecwa_0399 NC_013421.1 432152 432787 D TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2; KEGG: dda:Dd703_3589 CRISPR-associated protein, CSE2 family; CRISPR-associated protein, Cse2 family 432152..432787 Pectobacterium wasabiae WPP163 8528762 YP_003257850.1 CDS Pecwa_0400 NC_013421.1 432791 433858 D TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; KEGG: dda:Dd703_3588 CRISPR-associated protein, CSE4 family; CRISPR-associated protein, Cse4 family 432791..433858 Pectobacterium wasabiae WPP163 8528763 YP_003257851.1 CDS Pecwa_0401 NC_013421.1 433868 434602 D TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein CT1976; KEGG: dda:Dd703_3587 CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5 family 433868..434602 Pectobacterium wasabiae WPP163 8528764 YP_003257852.1 CDS Pecwa_0402 NC_013421.1 434602 435249 D TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: dda:Dd703_3586 CRISPR-associated protein, CSE3 family; CRISPR-associated protein, Cse3 family 434602..435249 Pectobacterium wasabiae WPP163 8528765 YP_003257853.1 CDS Pecwa_0403 NC_013421.1 435277 436194 D TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: dda:Dd703_3585 CRISPR-associated protein Cas1; CRISPR-associated protein Cas1 435277..436194 Pectobacterium wasabiae WPP163 8528766 YP_003257854.1 CDS Pecwa_0404 NC_013421.1 436195 436488 D TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein Cas2; KEGG: dda:Dd703_3584 CRISPR-associated protein Cas2; CRISPR-associated protein Cas2 436195..436488 Pectobacterium wasabiae WPP163 8528767 YP_003257855.1 CDS Pecwa_0405 NC_013421.1 437595 437966 R PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: esa:ESA_00803 hypothetical protein; XRE family transcriptional regulator complement(437595..437966) Pectobacterium wasabiae WPP163 8528768 YP_003257856.1 CDS Pecwa_0406 NC_013421.1 438040 438300 R PFAM: plasmid stabilization system; KEGG: ypb:YPTS_3250 plasmid stabilization system protein; plasmid stabilization system complement(438040..438300) Pectobacterium wasabiae WPP163 8528769 YP_003257857.1 CDS Pecwa_0407 NC_013421.1 438451 438756 D PFAM: protein of unknown function DUF2136; KEGG: eca:ECA0366 hypothetical protein; hypothetical protein 438451..438756 Pectobacterium wasabiae WPP163 8528770 YP_003257858.1 CDS Pecwa_0408 NC_013421.1 438753 439169 D PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: eca:ECA0367 DNA-binding protein; XRE family transcriptional regulator 438753..439169 Pectobacterium wasabiae WPP163 8528771 YP_003257859.1 CDS Pecwa_0409 NC_013421.1 439267 439362 D hypothetical protein 439267..439362 Pectobacterium wasabiae WPP163 8528772 YP_003257860.1 CDS Pecwa_0410 NC_013421.1 440027 440485 D KEGG: pct:PC1_0353 hypothetical protein; hypothetical protein 440027..440485 Pectobacterium wasabiae WPP163 8528773 YP_003257861.1 CDS Pecwa_0411 NC_013421.1 440566 441918 R PFAM: pyridoxal-dependent decarboxylase; KEGG: eca:ECA0369 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase complement(440566..441918) Pectobacterium wasabiae WPP163 8528774 YP_003257862.1 CDS Pecwa_0412 NC_013421.1 441949 443235 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0370 hypothetical protein; major facilitator superfamily protein complement(441949..443235) Pectobacterium wasabiae WPP163 8528775 YP_003257863.1 CDS Pecwa_0413 NC_013421.1 443375 443821 D PFAM: helix-turn-helix HxlR type; KEGG: pct:PC1_0356 HxlR family transcriptional regulator; HxlR family transcriptional regulator 443375..443821 Pectobacterium wasabiae WPP163 8528776 YP_003257864.1 CDS Pecwa_0414 NC_013421.1 443831 444328 D KEGG: eca:ECA0372 hypothetical protein; hypothetical protein 443831..444328 Pectobacterium wasabiae WPP163 8528777 YP_003257865.1 CDS Pecwa_0415 NC_013421.1 444355 445008 D KEGG: eca:ECA0373 hypothetical protein; hypothetical protein 444355..445008 Pectobacterium wasabiae WPP163 8528778 YP_003257866.1 CDS nrdG NC_013421.1 445020 445484 R activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein complement(445020..445484) Pectobacterium wasabiae WPP163 8528779 YP_003257867.1 CDS Pecwa_0417 NC_013421.1 445566 447704 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(445566..447704) Pectobacterium wasabiae WPP163 8528780 YP_003257868.1 CDS Pecwa_0418 NC_013421.1 448105 448491 R TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: pct:PC1_0365 endoribonuclease L-PSP; endoribonuclease L-PSP complement(448105..448491) Pectobacterium wasabiae WPP163 8528781 YP_003257869.1 CDS Pecwa_0419 NC_013421.1 448590 449054 R involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit complement(448590..449054) Pectobacterium wasabiae WPP163 8528782 YP_003257870.1 CDS pyrB NC_013421.1 449070 450005 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(449070..450005) Pectobacterium wasabiae WPP163 8528783 YP_003257871.1 CDS Pecwa_0421 NC_013421.1 450454 450918 D PFAM: conserved hypothetical protein; KEGG: eca:ECA0383 hypothetical protein; hypothetical protein 450454..450918 Pectobacterium wasabiae WPP163 8528784 YP_003257872.1 CDS Pecwa_0422 NC_013421.1 451293 451976 D PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pct:PC1_0371 LuxR family transcriptional regulator; LuxR family transcriptional regulator 451293..451976 Pectobacterium wasabiae WPP163 8528785 YP_003257873.1 CDS Pecwa_0423 NC_013421.1 451981 452646 D PFAM: hypothetical protein; SMART: regulatory protein LuxR; KEGG: pct:PC1_0372 PAS/PAC sensor protein; LuxR family transcriptional regulator 451981..452646 Pectobacterium wasabiae WPP163 8528786 YP_003257874.1 CDS Pecwa_0425 NC_013421.1 452817 453824 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.; ornithine carbamoyltransferase subunit I complement(452817..453824) Pectobacterium wasabiae WPP163 8528788 YP_003257875.1 CDS Pecwa_0426 NC_013421.1 453986 454408 D PFAM: protein of unknown function DUF1260; KEGG: pct:PC1_0375 hypothetical protein; hypothetical protein 453986..454408 Pectobacterium wasabiae WPP163 8528789 YP_003257876.1 CDS Pecwa_0427 NC_013421.1 454559 455062 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0386 acetyltransferase; N-acetyltransferase GCN5 complement(454559..455062) Pectobacterium wasabiae WPP163 8528790 YP_003257877.1 CDS Pecwa_0428 NC_013421.1 455357 456538 D PFAM: protein of unknown function DUF898 transmembrane; KEGG: eca:ECA0387 hypothetical protein; hypothetical protein 455357..456538 Pectobacterium wasabiae WPP163 8528791 YP_003257878.1 CDS Pecwa_0429 NC_013421.1 456555 457592 D PFAM: peptidase M48 Ste24p; KEGG: pct:PC1_0378 peptidase M48 Ste24p; peptidase M48 Ste24p 456555..457592 Pectobacterium wasabiae WPP163 8528792 YP_003257879.1 CDS Pecwa_0430 NC_013421.1 457934 459013 D PFAM: alpha/beta hydrolase fold; KEGG: pct:PC1_0379 homoserine O-acetyltransferase; hypothetical protein 457934..459013 Pectobacterium wasabiae WPP163 8528793 YP_003257880.1 CDS Pecwa_0431 NC_013421.1 459227 460846 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pct:PC1_0380 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 459227..460846 Pectobacterium wasabiae WPP163 8528794 YP_003257881.1 CDS Pecwa_0432 NC_013421.1 461098 462876 D PFAM: polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: eca:ECA0391 activator or transporter protein of haemolysin-like protein; polypeptide-transport-associated domain-containing protein ShlB-type 461098..462876 Pectobacterium wasabiae WPP163 8528795 YP_003257882.1 CDS Pecwa_0433 NC_013421.1 462948 469985 D TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF638 hemagglutinin/hemolysin KEGG: pct:PC1_2330 filamentous hemagglutinin family outer membrane protein; filamentous hemagglutinin family outer membrane protein 462948..469985 Pectobacterium wasabiae WPP163 8528796 YP_003257883.1 CDS Pecwa_0434 NC_013421.1 469991 470350 D hypothetical protein 469991..470350 Pectobacterium wasabiae WPP163 8528797 YP_003257884.1 CDS Pecwa_0437 NC_013421.1 471965 472360 D KEGG: pay:PAU_03360 hypothetical protein; hypothetical protein 471965..472360 Pectobacterium wasabiae WPP163 8528800 YP_003257885.1 CDS Pecwa_0438 NC_013421.1 472361 472903 R PFAM: phosphotransferase KptA/Tpt1; KEGG: eca:ECA0395 RNA 2'-phosphotransferase; phosphotransferase KptA/Tpt1 complement(472361..472903) Pectobacterium wasabiae WPP163 8528801 YP_003257886.1 CDS Pecwa_0439 NC_013421.1 472963 473205 R PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: eca:ECA4289 hypothetical protein; hypothetical protein complement(472963..473205) Pectobacterium wasabiae WPP163 8528802 YP_003257887.1 CDS Pecwa_0440 NC_013421.1 473441 474451 D KEGG: rec:RHECIAT_PB0000188 hypothetical protein; hypothetical protein 473441..474451 Pectobacterium wasabiae WPP163 8528803 YP_003257888.1 CDS Pecwa_0441 NC_013421.1 474454 475074 D PFAM: lysine exporter (LYSE/YGGA); KEGG: mlo:mlr3188 hypothetical protein; lysine exporter protein LysE/YggA 474454..475074 Pectobacterium wasabiae WPP163 8528804 YP_003257889.1 CDS valS NC_013421.1 475164 478019 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(475164..478019) Pectobacterium wasabiae WPP163 8528805 YP_003257890.1 CDS Pecwa_0443 NC_013421.1 478032 478481 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(478032..478481) Pectobacterium wasabiae WPP163 8528806 YP_003257891.1 CDS Pecwa_0444 NC_013421.1 478586 480097 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(478586..480097) Pectobacterium wasabiae WPP163 8528807 YP_003257892.1 CDS Pecwa_0445 NC_013421.1 480379 481491 D PFAM: permease YjgP/YjgQ family protein; KEGG: pct:PC1_0389 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 480379..481491 Pectobacterium wasabiae WPP163 8528808 YP_003257893.1 CDS Pecwa_0446 NC_013421.1 481491 482567 D PFAM: permease YjgP/YjgQ family protein; KEGG: pct:PC1_0390 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 481491..482567 Pectobacterium wasabiae WPP163 8528809 YP_003257894.1 CDS Pecwa_0447 NC_013421.1 483089 484348 D PFAM: integrase; KEGG: dze:Dd1591_3702 integrase; integrase 483089..484348 Pectobacterium wasabiae WPP163 8528811 YP_003257895.1 CDS Pecwa_0448 NC_013421.1 484399 484689 D hypothetical protein 484399..484689 Pectobacterium wasabiae WPP163 8528812 YP_003257896.1 CDS Pecwa_0449 NC_013421.1 484740 485012 D PFAM: Insertion element protein; KEGG: sdy:SDY_P213 iso-IS1 ORF1; Insertion element protein 484740..485012 Pectobacterium wasabiae WPP163 8528813 YP_003257897.1 CDS Pecwa_0451 NC_013421.1 485409 486989 R PFAM: protein of unknown function DUF87; KEGG: smt:Smal_1674 protein of unknown function DUF87; hypothetical protein complement(485409..486989) Pectobacterium wasabiae WPP163 8528815 YP_003257898.1 CDS Pecwa_0452 NC_013421.1 486979 488157 R KEGG: smt:Smal_1675 hypothetical protein; hypothetical protein complement(486979..488157) Pectobacterium wasabiae WPP163 8528816 YP_003257899.1 CDS Pecwa_0454 NC_013421.1 489899 490888 R PFAM: DNA methylase N-4/N-6; KEGG: sek:SSPA3985 DNA methyltransferase SptAIM; protects DNA against PvuII endonuclease; DNA methylase N-4/N-6 complement(489899..490888) Pectobacterium wasabiae WPP163 8528818 YP_003257900.1 CDS Pecwa_0455 NC_013421.1 490944 491180 D PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: sek:SSPA3986 subunit S of type I restriction-modification system; XRE family transcriptional regulator 490944..491180 Pectobacterium wasabiae WPP163 8528819 YP_003257901.1 CDS Pecwa_0456 NC_013421.1 491177 491740 D KEGG: sek:SSPA3987 subunit R of type I restriction-modification system; type II site-specific deoxyribonuclease 491177..491740 Pectobacterium wasabiae WPP163 8528820 YP_003257902.1 CDS Pecwa_0458 NC_013421.1 493458 493589 D hypothetical protein 493458..493589 Pectobacterium wasabiae WPP163 8528822 YP_003257903.1 CDS Pecwa_0459 NC_013421.1 493746 494207 D KEGG: ypy:YPK_3136 hypothetical protein; hypothetical protein 493746..494207 Pectobacterium wasabiae WPP163 8528823 YP_003257904.1 CDS Pecwa_0460 NC_013421.1 494266 494793 D KEGG: sbl:Sbal_0630 hypothetical protein; hypothetical protein 494266..494793 Pectobacterium wasabiae WPP163 8528824 YP_003257905.1 CDS Pecwa_0461 NC_013421.1 495042 495275 R hypothetical protein complement(495042..495275) Pectobacterium wasabiae WPP163 8528825 YP_003257906.1 CDS Pecwa_0462 NC_013421.1 495739 496221 R KEGG: ent:Ent638_4231 hypothetical protein; hypothetical protein complement(495739..496221) Pectobacterium wasabiae WPP163 8528826 YP_003257907.1 CDS Pecwa_0463 NC_013421.1 496232 496936 R KEGG: ent:Ent638_4232 hypothetical protein; hypothetical protein complement(496232..496936) Pectobacterium wasabiae WPP163 8528827 YP_003257908.1 CDS Pecwa_0464 NC_013421.1 496961 498496 R PFAM: protein of unknown function DUF323; KEGG: ent:Ent638_4233 hypothetical protein; hypothetical protein complement(496961..498496) Pectobacterium wasabiae WPP163 8528828 YP_003257909.1 CDS Pecwa_0465 NC_013421.1 498486 499718 R PFAM: protein of unknown function DUF214; KEGG: ent:Ent638_4234 hypothetical protein; hypothetical protein complement(498486..499718) Pectobacterium wasabiae WPP163 8528829 YP_003257910.1 CDS Pecwa_0466 NC_013421.1 499699 500367 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ent:Ent638_4235 ABC transporter; ABC transporter complement(499699..500367) Pectobacterium wasabiae WPP163 8528830 YP_003257911.1 CDS Pecwa_0467 NC_013421.1 500385 502364 R PFAM: von Willebrand factor A; KEGG: ent:Ent638_4236 von Willebrand factor, type A; von Willebrand factor A complement(500385..502364) Pectobacterium wasabiae WPP163 8528831 YP_003257912.1 CDS Pecwa_0468 NC_013421.1 502374 503354 R KEGG: ent:Ent638_4237 hypothetical protein; hypothetical protein complement(502374..503354) Pectobacterium wasabiae WPP163 8528832 YP_003257913.1 CDS Pecwa_0469 NC_013421.1 503361 506027 R PFAM: virulence effector, SrfC; KEGG: ent:Ent638_4238 hypothetical protein; virulence effector, SrfC complement(503361..506027) Pectobacterium wasabiae WPP163 8528833 YP_003257914.1 CDS Pecwa_0470 NC_013421.1 506027 509029 R PFAM: virulence protein SrfB; KEGG: ent:Ent638_4239 virulence protein SrfB; virulence protein SrfB complement(506027..509029) Pectobacterium wasabiae WPP163 8528834 YP_003257915.1 CDS Pecwa_0471 NC_013421.1 509030 510394 R KEGG: ent:Ent638_4240 hypothetical protein; hypothetical protein complement(509030..510394) Pectobacterium wasabiae WPP163 8528835 YP_003257916.1 CDS Pecwa_0472 NC_013421.1 510760 511971 R PFAM: von Willebrand factor A; SMART: von Willebrand factor A; KEGG: ent:Ent638_4241 von Willebrand factor, type A; von Willebrand factor A complement(510760..511971) Pectobacterium wasabiae WPP163 8528836 YP_003257917.1 CDS Pecwa_0473 NC_013421.1 512384 513505 D PFAM: cupin; SMART: transcription factor jumonji jmjC domain protein; KEGG: pct:PC1_0392 cupin 4 family protein; cupin 512384..513505 Pectobacterium wasabiae WPP163 8528837 YP_003257918.1 CDS Pecwa_0474 NC_013421.1 513802 514932 D PFAM: secretory lipase; KEGG: eca:ECA0421 exported lipase; secretory lipase 513802..514932 Pectobacterium wasabiae WPP163 8528838 YP_003257919.1 CDS Pecwa_0475 NC_013421.1 514996 516174 R PFAM: ABC transporter; KEGG: pct:PC1_0394 ABC-2 type transporter; ABC transporter complement(514996..516174) Pectobacterium wasabiae WPP163 8528839 YP_003257920.1 CDS Pecwa_0476 NC_013421.1 516168 517286 R KEGG: eca:ECA0423 hypothetical protein; hypothetical protein complement(516168..517286) Pectobacterium wasabiae WPP163 8528840 YP_003257921.1 CDS Pecwa_0477 NC_013421.1 517286 518284 R KEGG: eca:ECA0424 hypothetical protein; hypothetical protein complement(517286..518284) Pectobacterium wasabiae WPP163 8528841 YP_003257922.1 CDS Pecwa_0478 NC_013421.1 518281 519696 R PFAM: outer membrane efflux protein; KEGG: pct:PC1_0397 outer membrane efflux protein; outer membrane efflux protein complement(518281..519696) Pectobacterium wasabiae WPP163 8528842 YP_003257923.1 CDS Pecwa_0479 NC_013421.1 520262 522052 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cko:CKO_00841 hypothetical protein; ABC transporter complement(520262..522052) Pectobacterium wasabiae WPP163 8528843 YP_003257924.1 CDS Pecwa_0480 NC_013421.1 522326 523765 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(522326..523765) Pectobacterium wasabiae WPP163 8528844 YP_003257925.1 CDS Pecwa_0481 NC_013421.1 524017 525012 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pct:PC1_0399 LysR family transcriptional regulator; LysR family transcriptional regulator complement(524017..525012) Pectobacterium wasabiae WPP163 8528845 YP_003257926.1 CDS Pecwa_0482 NC_013421.1 525737 526072 R KEGG: pct:PC1_0400 hypothetical protein; hypothetical protein complement(525737..526072) Pectobacterium wasabiae WPP163 8528846 YP_003257927.1 CDS Pecwa_0483 NC_013421.1 526654 526971 R PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: pen:PSEEN5219 Cro/CI family transcriptional regulator; XRE family transcriptional regulator complement(526654..526971) Pectobacterium wasabiae WPP163 8528847 YP_003257928.1 CDS Pecwa_0484 NC_013421.1 527073 527417 R KEGG: yen:YE0486 hypothetical protein; hypothetical protein complement(527073..527417) Pectobacterium wasabiae WPP163 8528848 YP_003257929.1 CDS Pecwa_0485 NC_013421.1 527432 527701 R KEGG: yen:YE0485 hypothetical protein; hypothetical protein complement(527432..527701) Pectobacterium wasabiae WPP163 8528849 YP_003257930.1 CDS Pecwa_0486 NC_013421.1 527862 529439 R PFAM: regulator of RNA terminal phosphate cyclase; sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: pct:PC1_0403 sigma 54 interacting domain protein; sigma-54 interacting domain-containing protein complement(527862..529439) Pectobacterium wasabiae WPP163 8528850 YP_003257931.1 CDS Pecwa_0487 NC_013421.1 529631 530866 D PFAM: protein of unknown function UPF0027; KEGG: pct:PC1_0404 hypothetical protein; hypothetical protein 529631..530866 Pectobacterium wasabiae WPP163 8528851 YP_003257932.1 CDS Pecwa_0488 NC_013421.1 530871 531662 D PFAM: nucleotidyltransferase, predicted; KEGG: pct:PC1_0405 hypothetical protein; nucleotidyltransferase 530871..531662 Pectobacterium wasabiae WPP163 8528852 YP_003257933.1 CDS Pecwa_0489 NC_013421.1 531708 533309 D KEGG: ypg:YpAngola_A1898 hypothetical protein; hypothetical protein 531708..533309 Pectobacterium wasabiae WPP163 8528853 YP_003257934.1 CDS Pecwa_0490 NC_013421.1 533332 534114 R KEGG: eca:ECA0432 hypothetical protein; hypothetical protein complement(533332..534114) Pectobacterium wasabiae WPP163 8528854 YP_003257935.1 CDS Pecwa_0491 NC_013421.1 534267 535364 D PFAM: protein of unknown function DUF1615; KEGG: eca:ECA0433 lipoprotein; hypothetical protein 534267..535364 Pectobacterium wasabiae WPP163 8528855 YP_003257936.1 CDS Pecwa_0492 NC_013421.1 535460 537409 R PFAM: nitrate and nitrite sensing domain protein; chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0434 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(535460..537409) Pectobacterium wasabiae WPP163 8528856 YP_003257937.1 CDS Pecwa_0493 NC_013421.1 537760 540471 R TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; KEGG: eca:ECA0435 magnesium transport ATPase; magnesium-translocating P-type ATPase complement(537760..540471) Pectobacterium wasabiae WPP163 8528857 YP_003257938.1 CDS Pecwa_0494 NC_013421.1 540549 540695 D hypothetical protein 540549..540695 Pectobacterium wasabiae WPP163 8528858 YP_003257939.1 CDS Pecwa_0495 NC_013421.1 540937 542514 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: pct:PC1_0416 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(540937..542514) Pectobacterium wasabiae WPP163 8528859 YP_003257940.1 CDS Pecwa_0496 NC_013421.1 542943 543257 R TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: eca:ECA0437 hypothetical protein; L-rhamnose 1-epimerase complement(542943..543257) Pectobacterium wasabiae WPP163 8528860 YP_003257941.1 CDS Pecwa_0497 NC_013421.1 543342 544166 R KEGG: pct:PC1_0418 rhamnulose-1-phosphate aldolase; TIGRFAM: rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein; rhamnulose-1-phosphate aldolase complement(543342..544166) Pectobacterium wasabiae WPP163 8528861 YP_003257942.1 CDS Pecwa_0498 NC_013421.1 544171 545433 R catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase complement(544171..545433) Pectobacterium wasabiae WPP163 8528862 YP_003257943.1 CDS rhaB NC_013421.1 545430 546920 R catalyzes the ATP-dependent phosphorylation of rhamnulose; rhamnulokinase complement(545430..546920) Pectobacterium wasabiae WPP163 8528863 YP_003257944.1 CDS Pecwa_0500 NC_013421.1 547289 548128 D activates the expression of the rhaBAD operon and rhaT gene; transcriptional activator RhaS 547289..548128 Pectobacterium wasabiae WPP163 8528864 YP_003257945.1 CDS Pecwa_0501 NC_013421.1 548153 549007 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA0442 L-rhamnose operon transcriptional activator; AraC family transcriptional regulator 548153..549007 Pectobacterium wasabiae WPP163 8528865 YP_003257946.1 CDS Pecwa_0502 NC_013421.1 549069 549359 D PFAM: CopG domain protein DNA-binding domain protein; KEGG: pct:PC1_0423 transcriptional regulator, CopG family; CopG family transcriptional regulator 549069..549359 Pectobacterium wasabiae WPP163 8528866 YP_003257947.1 CDS Pecwa_0503 NC_013421.1 549347 549652 D PFAM: plasmid stabilization system; KEGG: pct:PC1_0424 hypothetical protein; plasmid stabilization system 549347..549652 Pectobacterium wasabiae WPP163 8528867 YP_003257948.1 CDS Pecwa_0504 NC_013421.1 549712 551400 R PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_0425 ABC transporter related; ABC transporter complement(549712..551400) Pectobacterium wasabiae WPP163 8528868 YP_003257949.1 CDS Pecwa_0505 NC_013421.1 551397 552263 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_0426 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(551397..552263) Pectobacterium wasabiae WPP163 8528869 YP_003257950.1 CDS Pecwa_0506 NC_013421.1 552256 553215 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_0427 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(552256..553215) Pectobacterium wasabiae WPP163 8528870 YP_003257951.1 CDS Pecwa_0507 NC_013421.1 553193 554806 R PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA0448 ABC transporter extracellular solute binding protein; family 5 extracellular solute-binding protein complement(553193..554806) Pectobacterium wasabiae WPP163 8528871 YP_003257952.1 CDS Pecwa_0508 NC_013421.1 555341 555955 D PFAM: protein of unknown function DUF1440; KEGG: pct:PC1_0429 hypothetical protein; hypothetical protein 555341..555955 Pectobacterium wasabiae WPP163 8528872 YP_003257953.1 CDS Pecwa_0509 NC_013421.1 556255 556719 R KEGG: pen:PSEEN0545 hypothetical protein; hypothetical protein complement(556255..556719) Pectobacterium wasabiae WPP163 8528873 YP_003257954.1 CDS Pecwa_0511 NC_013421.1 557251 558285 R transports L-rhamnose and L-lyxose into the cell; rhamnose-proton symporter complement(557251..558285) Pectobacterium wasabiae WPP163 8528875 YP_003257955.1 CDS Pecwa_0512 NC_013421.1 558738 559244 D PFAM: conserved hypothetical protein; KEGG: pct:PC1_0431 hypothetical protein; hypothetical protein 558738..559244 Pectobacterium wasabiae WPP163 8528876 YP_003257956.1 CDS Pecwa_0513 NC_013421.1 559339 560376 D PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: pct:PC1_0432 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase zinc-binding domain protein 559339..560376 Pectobacterium wasabiae WPP163 8528877 YP_003257957.1 CDS Pecwa_0514 NC_013421.1 560464 560610 D KEGG: pct:PC1_0433 transcriptional regulator, AraC family; AraC family transcriptional regulator 560464..560610 Pectobacterium wasabiae WPP163 8528878 YP_003257958.1 CDS Pecwa_0515 NC_013421.1 560772 561146 R KEGG: efe:EFER_1461 hypothetical protein; hypothetical protein complement(560772..561146) Pectobacterium wasabiae WPP163 8528879 YP_003257959.1 CDS Pecwa_0517 NC_013421.1 561454 561942 R hypothetical protein complement(561454..561942) Pectobacterium wasabiae WPP163 8528881 YP_003257960.1 CDS Pecwa_0518 NC_013421.1 562429 562713 R hypothetical protein complement(562429..562713) Pectobacterium wasabiae WPP163 8528882 YP_003257961.1 CDS Pecwa_0520 NC_013421.1 563350 564375 R KEGG: conserved hypothetical protein; hypothetical protein complement(563350..564375) Pectobacterium wasabiae WPP163 8528884 YP_003257962.1 CDS Pecwa_0521 NC_013421.1 564345 565037 R KEGG: eta:ETA_30000 membrane-bound sugar-binding protein; Rhs family protein-like protein complement(564345..565037) Pectobacterium wasabiae WPP163 8528885 YP_003257963.1 CDS Pecwa_0523 NC_013421.1 565242 565526 R KEGG: pen:PSEEN2510 hypothetical protein; hypothetical protein complement(565242..565526) Pectobacterium wasabiae WPP163 8528887 YP_003257964.1 CDS Pecwa_0524 NC_013421.1 565884 566240 R PFAM: RHS protein; KEGG: ypy:YPK_0403 YD repeat-containing protein; RHS protein complement(565884..566240) Pectobacterium wasabiae WPP163 8528888 YP_003257965.1 CDS Pecwa_0525 NC_013421.1 566339 566992 R KEGG: hypothetical protein; hypothetical protein complement(566339..566992) Pectobacterium wasabiae WPP163 8528889 YP_003257966.1 CDS Pecwa_0527 NC_013421.1 567941 568429 R hypothetical protein complement(567941..568429) Pectobacterium wasabiae WPP163 8528891 YP_003257967.1 CDS Pecwa_0529 NC_013421.1 569000 569422 R hypothetical protein complement(569000..569422) Pectobacterium wasabiae WPP163 8528893 YP_003257968.1 CDS Pecwa_0532 NC_013421.1 570426 570692 R PFAM: PAAR repeat-containing protein; KEGG: pct:PC1_2184 PaaR repeat-containing protein; PAAR repeat-containing protein complement(570426..570692) Pectobacterium wasabiae WPP163 8528896 YP_003257969.1 CDS Pecwa_0533 NC_013421.1 570784 571158 R TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: pct:PC1_0054 type VI secretion system effector, Hcp1 family; type VI secretion system effector complement(570784..571158) Pectobacterium wasabiae WPP163 8528897 YP_003257970.1 CDS Pecwa_0534 NC_013421.1 571346 571648 R KEGG: pct:PC1_0438 hypothetical protein; hypothetical protein complement(571346..571648) Pectobacterium wasabiae WPP163 8528898 YP_003257971.1 CDS Pecwa_0535 NC_013421.1 571662 572027 R KEGG: pct:PC1_0438 hypothetical protein; hypothetical protein complement(571662..572027) Pectobacterium wasabiae WPP163 8528899 YP_003257972.1 CDS Pecwa_0536 NC_013421.1 572024 572458 R KEGG: pmr:PMI2877 hypothetical protein; hypothetical protein complement(572024..572458) Pectobacterium wasabiae WPP163 8528900 YP_003257973.1 CDS Pecwa_0537 NC_013421.1 572623 572922 R KEGG: eca:ECA0454 hypothetical protein; hypothetical protein complement(572623..572922) Pectobacterium wasabiae WPP163 8528901 YP_003257974.1 CDS Pecwa_0539 NC_013421.1 573661 574872 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: eca:ECA0457 hypothetical protein; hypothetical protein complement(573661..574872) Pectobacterium wasabiae WPP163 8528903 YP_003257975.1 CDS Pecwa_0540 NC_013421.1 574902 576080 R Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase complement(574902..576080) Pectobacterium wasabiae WPP163 8528904 YP_003257976.1 CDS Pecwa_0541 NC_013421.1 576106 577431 R exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II complement(576106..577431) Pectobacterium wasabiae WPP163 8528905 YP_003257977.1 CDS Pecwa_0542 NC_013421.1 577493 578080 R the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein complement(577493..578080) Pectobacterium wasabiae WPP163 8528906 YP_003257978.1 CDS Pecwa_0543 NC_013421.1 578273 578602 D PFAM: protein of unknown function DUF710; KEGG: eca:ECA0461 Z-ring-associated protein; Z-ring-associated protein 578273..578602 Pectobacterium wasabiae WPP163 8528907 YP_003257979.1 CDS Pecwa_0544 NC_013421.1 578901 579542 D TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: pct:PC1_0447 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 578901..579542 Pectobacterium wasabiae WPP163 8528909 YP_003257980.1 CDS Pecwa_0545 NC_013421.1 579539 580792 R catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase complement(579539..580792) Pectobacterium wasabiae WPP163 8528910 YP_003257981.1 CDS Pecwa_0546 NC_013421.1 580924 582306 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(580924..582306) Pectobacterium wasabiae WPP163 8528911 YP_003257982.1 CDS serB NC_013421.1 582324 583301 R catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase complement(582324..583301) Pectobacterium wasabiae WPP163 8528912 YP_003257983.1 CDS Pecwa_0548 NC_013421.1 583458 584156 D PFAM: virulence factor, haemolysin regulator; KEGG: eca:ECA0466 hypothetical protein; hypothetical protein 583458..584156 Pectobacterium wasabiae WPP163 8528913 YP_003257984.1 CDS Pecwa_0549 NC_013421.1 584362 584673 D PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: amc:MADE_04053 transcriptional regulator, XRE family protein; XRE family transcriptional regulator 584362..584673 Pectobacterium wasabiae WPP163 8528914 YP_003257985.1 CDS Pecwa_0550 NC_013421.1 584666 585880 D TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: amc:MADE_04052 HipA-like protein; HipA N-terminal domain-containing protein 584666..585880 Pectobacterium wasabiae WPP163 8528915 YP_003257986.1 CDS prfC NC_013421.1 586161 587750 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 586161..587750 Pectobacterium wasabiae WPP163 8528916 YP_003257987.1 CDS Pecwa_0552 NC_013421.1 588274 588882 D PFAM: transport-associated; SMART: transport-associated and nodulation region; KEGG: pct:PC1_0454 transporter; hypothetical protein 588274..588882 Pectobacterium wasabiae WPP163 8528917 YP_003257988.1 CDS Pecwa_0553 NC_013421.1 589034 589195 D PFAM: protein of unknown function DUF1328; KEGG: eca:ECA0470 hypothetical protein; hypothetical protein 589034..589195 Pectobacterium wasabiae WPP163 8528918 YP_003257989.1 CDS Pecwa_0554 NC_013421.1 589323 589511 D KEGG: pct:PC1_0456 hypothetical protein; hypothetical protein 589323..589511 Pectobacterium wasabiae WPP163 8528919 YP_003257990.1 CDS Pecwa_0555 NC_013421.1 589611 590408 D PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: eca:ECA0472 TatD family deoxyribonuclease; TatD-related deoxyribonuclease 589611..590408 Pectobacterium wasabiae WPP163 8528920 YP_003257991.1 CDS Pecwa_0556 NC_013421.1 590825 592102 D TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: pct:PC1_0458 nucleoside transporter; nucleoside transporter 590825..592102 Pectobacterium wasabiae WPP163 8528921 YP_003257992.1 CDS Pecwa_0557 NC_013421.1 592251 592967 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: eca:ECA0474 enterobactin synthetase component D (4'-phosphopantetheinyl transferase); 4'-phosphopantetheinyl transferase 592251..592967 Pectobacterium wasabiae WPP163 8528922 YP_003257993.1 CDS Pecwa_0558 NC_013421.1 593017 594990 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pct:PC1_0460 TonB-dependent receptor; TonB-dependent receptor complement(593017..594990) Pectobacterium wasabiae WPP163 8528923 YP_003257994.1 CDS Pecwa_0559 NC_013421.1 595107 595544 R KEGG: pct:PC1_0461 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(595107..595544) Pectobacterium wasabiae WPP163 8528924 YP_003257995.1 CDS Pecwa_0560 NC_013421.1 595876 597072 D TIGRFAM: isochorismate synthase; PFAM: chorismate binding-like; KEGG: eca:ECA0477 isochorismate synthase; isochorismate synthase 595876..597072 Pectobacterium wasabiae WPP163 8528925 YP_003257996.1 CDS entE NC_013421.1 597069 598697 D bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; enterobactin synthase subunit E 597069..598697 Pectobacterium wasabiae WPP163 8528926 YP_003257997.1 CDS Pecwa_0562 NC_013421.1 598724 598831 D hypothetical protein 598724..598831 Pectobacterium wasabiae WPP163 8528927 YP_003257998.1 CDS Pecwa_0563 NC_013421.1 598840 599622 D catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase 598840..599622 Pectobacterium wasabiae WPP163 8528928 YP_003257999.1 CDS Pecwa_0564 NC_013421.1 599703 601211 R PFAM: outer membrane efflux protein; KEGG: pct:PC1_0469 outer membrane efflux protein; outer membrane efflux protein complement(599703..601211) Pectobacterium wasabiae WPP163 8528929 YP_003258000.1 CDS Pecwa_0565 NC_013421.1 601314 609776 R PFAM: Ig family protein; SMART: Dystroglycan-type cadherin domain protein; cadherin; KEGG: pct:PC1_0470 Ig family protein; Ig family protein complement(601314..609776) Pectobacterium wasabiae WPP163 8528930 YP_003258001.1 CDS Pecwa_0566 NC_013421.1 610133 610945 R PFAM: hypothetical protein; KEGG: pct:PC1_0471 tail collar domain protein; hypothetical protein complement(610133..610945) Pectobacterium wasabiae WPP163 8528931 YP_003258002.1 CDS Pecwa_0567 NC_013421.1 611219 613324 R PFAM: peptidase M50; KEGG: pct:PC1_0472 peptidase M50; peptidase M50 complement(611219..613324) Pectobacterium wasabiae WPP163 8528932 YP_003258003.1 CDS Pecwa_0568 NC_013421.1 613321 614649 R KEGG: pct:PC1_0473 hypothetical protein; hypothetical protein complement(613321..614649) Pectobacterium wasabiae WPP163 8528933 YP_003258004.1 CDS Pecwa_0569 NC_013421.1 614646 615449 R PFAM: hypothetical protein; KEGG: pct:PC1_0474 hypothetical protein; hypothetical protein complement(614646..615449) Pectobacterium wasabiae WPP163 8528934 YP_003258005.1 CDS Pecwa_0570 NC_013421.1 615733 617814 R KEGG: eca:ECA0485 hypothetical protein; hypothetical protein complement(615733..617814) Pectobacterium wasabiae WPP163 8528935 YP_003258006.1 CDS Pecwa_0571 NC_013421.1 617906 618004 D hypothetical protein 617906..618004 Pectobacterium wasabiae WPP163 8528936 YP_003258007.1 CDS Pecwa_0572 NC_013421.1 618519 619451 D TIGRFAM: phosphoenolpyruvate phosphomutase; KEGG: eca:ECA0487 phosphoenolpyruvate phosphomutase; phosphoenolpyruvate phosphomutase 618519..619451 Pectobacterium wasabiae WPP163 8528937 YP_003258008.1 CDS Pecwa_0573 NC_013421.1 619642 620796 D TIGRFAM: phosphonopyruvate decarboxylase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: eca:ECA0488 phosphonopyruvate decarboxylase; phosphonopyruvate decarboxylase 619642..620796 Pectobacterium wasabiae WPP163 8528938 YP_003258009.1 CDS Pecwa_0574 NC_013421.1 620829 621722 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: eca:ECA0489 2-hydroxy-3-oxopropionate reductase; 6-phosphogluconate dehydrogenase 620829..621722 Pectobacterium wasabiae WPP163 8528939 YP_003258010.1 CDS Pecwa_0575 NC_013421.1 621723 622166 D TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: eca:ECA0490 phosphonate metabolism protein; phosphonate C-P lyase system protein PhnG 621723..622166 Pectobacterium wasabiae WPP163 8528940 YP_003258011.1 CDS phnH NC_013421.1 622173 622754 D TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: eca:ECA0491 carbon-phosphorus lyase complex subunit; carbon-phosphorus lyase complex subunit 622173..622754 Pectobacterium wasabiae WPP163 8528941 YP_003258012.1 CDS Pecwa_0577 NC_013421.1 622754 623857 D PFAM: phosphonate metabolism; KEGG: eca:ECA0492 phosphonate metabolism protein; phosphonate metabolism protein 622754..623857 Pectobacterium wasabiae WPP163 8528942 YP_003258013.1 CDS Pecwa_0578 NC_013421.1 623857 624762 D PFAM: phosphonate metabolism PhnJ; KEGG: pct:PC1_0482 phosphonate metabolism PhnJ; phosphonate metabolism PhnJ 623857..624762 Pectobacterium wasabiae WPP163 8528943 YP_003258014.1 CDS phnK NC_013421.1 624759 625547 D KEGG: eca:ECA0494 phosphonate C-P lyase system protein PhnK; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: ATPase AAA; phosphonate C-P lyase system protein PhnK 624759..625547 Pectobacterium wasabiae WPP163 8528944 YP_003258015.1 CDS Pecwa_0580 NC_013421.1 625569 626285 D KEGG: eca:ECA0495 phosphonate ABC transporter ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter; SMART: ATPase AAA; phosphonate C-P lyase system protein PhnL 625569..626285 Pectobacterium wasabiae WPP163 8528945 YP_003258016.1 CDS Pecwa_0581 NC_013421.1 626275 627411 D TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; amidohydrolase; KEGG: eca:ECA0496 phosphonate metabolism protein; phosphonate metabolism protein PhnM 626275..627411 Pectobacterium wasabiae WPP163 8528946 YP_003258017.1 CDS Pecwa_0582 NC_013421.1 627414 627980 D TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: eca:ECA0497 ribose 1,5-bisphosphokinase; ribose 1,5-bisphosphokinase 627414..627980 Pectobacterium wasabiae WPP163 8528947 YP_003258018.1 CDS phnP NC_013421.1 628007 628780 D required for the use of phosphonates and phosphite as phosphorus sources; carbon-phosphorus lyase complex accessory protein 628007..628780 Pectobacterium wasabiae WPP163 8528948 YP_003258019.1 CDS Pecwa_0584 NC_013421.1 629384 630790 D TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: eca:ECA0499 capsular polysaccharide biosynthesis protein; undecaprenyl-phosphate glucose phosphotransferase 629384..630790 Pectobacterium wasabiae WPP163 8528949 YP_003258020.1 CDS Pecwa_0585 NC_013421.1 630780 632066 D KEGG: eca:ECA0500 capsular polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein 630780..632066 Pectobacterium wasabiae WPP163 8528950 YP_003258021.1 CDS Pecwa_0586 NC_013421.1 632068 632625 D PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: eca:ECA0501 capsular polysaccharide export protein; polysaccharide export protein 632068..632625 Pectobacterium wasabiae WPP163 8528951 YP_003258022.1 CDS Pecwa_0587 NC_013421.1 632628 634760 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: eca:ECA0502 capsulatr polysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 632628..634760 Pectobacterium wasabiae WPP163 8528952 YP_003258023.1 CDS Pecwa_0588 NC_013421.1 634774 635985 D KEGG: eca:ECA0503 capsular polysaccharide bisynthesis protein; capsular polysaccharide biosynthesis protein 634774..635985 Pectobacterium wasabiae WPP163 8528953 YP_003258024.1 CDS Pecwa_0589 NC_013421.1 635982 637364 D KEGG: eca:ECA0504 capsular polysaccharide bisynthesis protein; capsular polysaccharide biosynthesis protein 635982..637364 Pectobacterium wasabiae WPP163 8528954 YP_003258025.1 CDS Pecwa_0590 NC_013421.1 637357 638346 D PFAM: glycosyl transferase family 2; KEGG: eca:ECA0505 capsular polysaccharide bisynthesis glycosyl transferase; family 2 glycosyl transferase 637357..638346 Pectobacterium wasabiae WPP163 8528955 YP_003258026.1 CDS Pecwa_0591 NC_013421.1 638353 639567 D PFAM: glycosyl transferase group 1; KEGG: eca:ECA0506 capsular polysaccharide bisynthesis glycosyl transferase; group 1 glycosyl transferase 638353..639567 Pectobacterium wasabiae WPP163 8528956 YP_003258027.1 CDS Pecwa_0592 NC_013421.1 639569 640681 D PFAM: glycosyl transferase group 1; protein of unknown function DUF1972; KEGG: eca:ECA0507 capsular polysaccharide bisynthesis glycosyl transferase; group 1 glycosyl transferase 639569..640681 Pectobacterium wasabiae WPP163 8528957 YP_003258028.1 CDS Pecwa_0593 NC_013421.1 640684 641091 D KEGG: eca:ECA0508 hypothetical protein; hypothetical protein 640684..641091 Pectobacterium wasabiae WPP163 8528958 YP_003258029.1 CDS Pecwa_0594 NC_013421.1 641130 642524 D KEGG: eca:ECA0509 hypothetical protein; hypothetical protein 641130..642524 Pectobacterium wasabiae WPP163 8528959 YP_003258030.1 CDS Pecwa_0595 NC_013421.1 642551 643051 D KEGG: eca:ECA0510 capsular polysacharide biosynthesis transferase; capsular polysacharide biosynthesis transferase 642551..643051 Pectobacterium wasabiae WPP163 8528960 YP_003258031.1 CDS Pecwa_0599 NC_013421.1 644914 645978 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: plu:plu1515 hypothetical protein; UBA/THIF-type NAD/FAD binding protein 644914..645978 Pectobacterium wasabiae WPP163 8528964 YP_003258032.1 CDS Pecwa_0600 NC_013421.1 645975 647210 D PFAM: major facilitator superfamily MFS_1; KEGG: ypb:YPTS_1931 major facilitator transporter; major facilitator superfamily protein 645975..647210 Pectobacterium wasabiae WPP163 8528965 YP_003258033.1 CDS Pecwa_0601 NC_013421.1 647207 648013 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: ypb:YPTS_1935 methyltransferase type 11; methyltransferase type 11 647207..648013 Pectobacterium wasabiae WPP163 8528966 YP_003258034.1 CDS Pecwa_0602 NC_013421.1 647998 649764 D PFAM: Orn/DAP/Arg decarboxylase 2; GCN5-related N-acetyltransferase; KEGG: ypb:YPTS_1936 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 647998..649764 Pectobacterium wasabiae WPP163 8528967 YP_003258035.1 CDS Pecwa_0603 NC_013421.1 649985 650242 D KEGG: dal:Dalk_2939 plasmid pRiA4b ORF-3 family protein; hypothetical protein 649985..650242 Pectobacterium wasabiae WPP163 8528968 YP_003258036.1 CDS Pecwa_0605 NC_013421.1 650732 651619 D KEGG: ypi:YpsIP31758_3748 hypothetical protein; hypothetical protein 650732..651619 Pectobacterium wasabiae WPP163 8528970 YP_003258037.1 CDS Pecwa_0606 NC_013421.1 651619 652005 D KEGG: eca:ECA0518 hypothetical protein; hypothetical protein 651619..652005 Pectobacterium wasabiae WPP163 8528971 YP_003258038.1 CDS Pecwa_0607 NC_013421.1 651998 653359 D TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: ypi:YpsIP31758_3747 replicative DNA helicase; replicative DNA helicase 651998..653359 Pectobacterium wasabiae WPP163 8528972 YP_003258039.1 CDS Pecwa_0608 NC_013421.1 653359 655083 D KEGG: spq:SPAB_05337 hypothetical protein; hypothetical protein 653359..655083 Pectobacterium wasabiae WPP163 8528973 YP_003258040.1 CDS Pecwa_0609 NC_013421.1 655073 655312 D PFAM: zinc finger DksA/TraR C4-type; KEGG: plu:plu1033 hypothetical protein; TraR/DksA family transcriptional regulator 655073..655312 Pectobacterium wasabiae WPP163 8528974 YP_003258041.1 CDS Pecwa_0610 NC_013421.1 655309 655974 D KEGG: spq:SPAB_05339 hypothetical protein; hypothetical protein 655309..655974 Pectobacterium wasabiae WPP163 8528975 YP_003258042.1 CDS Pecwa_0611 NC_013421.1 655967 656083 D hypothetical protein 655967..656083 Pectobacterium wasabiae WPP163 8528976 YP_003258043.1 CDS Pecwa_0612 NC_013421.1 656080 656661 D KEGG: yen:YE3512 hypothetical protein; hypothetical protein 656080..656661 Pectobacterium wasabiae WPP163 8528977 YP_003258044.1 CDS Pecwa_0613 NC_013421.1 656663 656893 D KEGG: spq:SPAB_05341 hypothetical protein; hypothetical protein 656663..656893 Pectobacterium wasabiae WPP163 8528978 YP_003258045.1 CDS Pecwa_0614 NC_013421.1 656890 657087 D hypothetical protein 656890..657087 Pectobacterium wasabiae WPP163 8528979 YP_003258046.1 CDS Pecwa_0615 NC_013421.1 657087 657329 D hypothetical protein 657087..657329 Pectobacterium wasabiae WPP163 8528980 YP_003258047.1 CDS Pecwa_0616 NC_013421.1 657326 658624 D KEGG: yen:YE3511 hypothetical protein; hypothetical protein 657326..658624 Pectobacterium wasabiae WPP163 8528981 YP_003258048.1 CDS Pecwa_0617 NC_013421.1 659131 659883 D PFAM: Domain of unknown function DUF1845; KEGG: spq:SPAB_05346 hypothetical protein; hypothetical protein 659131..659883 Pectobacterium wasabiae WPP163 8528982 YP_003258049.1 CDS Pecwa_0618 NC_013421.1 659898 661907 D decatenates replicating daughter chromosomes; DNA topoisomerase III 659898..661907 Pectobacterium wasabiae WPP163 8528983 YP_003258050.1 CDS Pecwa_0619 NC_013421.1 662542 663051 D KEGG: eca:ECA0528 hypothetical protein; hypothetical protein 662542..663051 Pectobacterium wasabiae WPP163 8528984 YP_003258051.1 CDS Pecwa_0620 NC_013421.1 663111 663659 D binds to single stranded DNA and PriA helcase facilitate replication restart; single-stranded DNA-binding protein 663111..663659 Pectobacterium wasabiae WPP163 8528985 YP_003258052.1 CDS Pecwa_0621 NC_013421.1 663763 664347 D KEGG: net:Neut_0078 hypothetical protein; hypothetical protein 663763..664347 Pectobacterium wasabiae WPP163 8528986 YP_003258053.1 CDS Pecwa_0622 NC_013421.1 664419 664856 D PFAM: protein of unknown function DUF29; KEGG: eca:ECA0531 plasmid-related protein; hypothetical protein 664419..664856 Pectobacterium wasabiae WPP163 8528987 YP_003258054.1 CDS Pecwa_0623 NC_013421.1 665007 666350 D KEGG: eca:ECA0532 type IV pilus protein; type IV pilus protein 665007..666350 Pectobacterium wasabiae WPP163 8528988 YP_003258055.1 CDS Pecwa_0624 NC_013421.1 666350 666796 D KEGG: eca:ECA0533 type IV pilus protein; type IV pilus protein 666350..666796 Pectobacterium wasabiae WPP163 8528989 YP_003258056.1 CDS Pecwa_0625 NC_013421.1 666806 668470 D TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family; PFAM: Secretin domain protein; KEGG: eca:ECA0534 type IV pilus protein; type IVB pilus formation outer membrane protein, R64 PilN family 666806..668470 Pectobacterium wasabiae WPP163 8528990 YP_003258057.1 CDS Pecwa_0626 NC_013421.1 668481 669794 D KEGG: stt:t4243 pilus assembly protein; hypothetical protein 668481..669794 Pectobacterium wasabiae WPP163 8528991 YP_003258058.1 CDS Pecwa_0627 NC_013421.1 669791 670300 D TIGRFAM: type IV pilus biogenesis protein PilP; KEGG: eca:ECA0537 type IV pilus protein; type IV pilus biogenesis protein PilP 669791..670300 Pectobacterium wasabiae WPP163 8528992 YP_003258059.1 CDS Pecwa_0628 NC_013421.1 670300 670437 D KEGG: eca:ECA0537 type IV pilus protein; type IV pilus protein 670300..670437 Pectobacterium wasabiae WPP163 8528993 YP_003258060.1 CDS Pecwa_0629 NC_013421.1 670437 671996 D PFAM: type II secretion system protein E; KEGG: eca:ECA0538 type IV pilus nucleotide-binding protein; type II secretion system protein E 670437..671996 Pectobacterium wasabiae WPP163 8528994 YP_003258061.1 CDS Pecwa_0630 NC_013421.1 671999 673165 D KEGG: eca:ECA0540 type IV pilus protein; type IV pilus protein 671999..673165 Pectobacterium wasabiae WPP163 8528995 YP_003258062.1 CDS Pecwa_0631 NC_013421.1 673222 673818 D PFAM: PilS domain protein; KEGG: eca:ECA0541 type IV pilus prepilin; PilS domain-containing protein 673222..673818 Pectobacterium wasabiae WPP163 8528996 YP_003258063.1 CDS Pecwa_0632 NC_013421.1 673818 674345 D PFAM: lytic transglycosylase catalytic; KEGG: eca:ECA0542 type IV pilus protein; lytic transglycosylase 673818..674345 Pectobacterium wasabiae WPP163 8528997 YP_003258064.1 CDS Pecwa_0633 NC_013421.1 674342 674995 D KEGG: eca:ECA0543 prepilin peptidase; prepilin peptidase 674342..674995 Pectobacterium wasabiae WPP163 8528998 YP_003258065.1 CDS Pecwa_0634 NC_013421.1 675009 676607 D PFAM: shufflon domain protein; hypothetical protein; KEGG: eca:ECA0544 type IV pilus prepilin protein; shufflon domain-containing protein 675009..676607 Pectobacterium wasabiae WPP163 8528999 YP_003258066.1 CDS Pecwa_0635 NC_013421.1 676679 677101 D PFAM: hypothetical protein; KEGG: eca:ECA0545 alternative C-terminus for the PilV protein (fragment); hypothetical protein 676679..677101 Pectobacterium wasabiae WPP163 8529000 YP_003258067.1 CDS Pecwa_0636 NC_013421.1 677588 678022 R PFAM: hypothetical protein; KEGG: eca:ECA0545 alternative C-terminus for the PilV protein (fragment); hypothetical protein complement(677588..678022) Pectobacterium wasabiae WPP163 8529001 YP_003258068.1 CDS Pecwa_0637 NC_013421.1 678324 678746 R PFAM: hypothetical protein; KEGG: eca:ECA0545 alternative C-terminus for the PilV protein (fragment); hypothetical protein complement(678324..678746) Pectobacterium wasabiae WPP163 8529002 YP_003258069.1 CDS Pecwa_0638 NC_013421.1 678818 679291 R PFAM: hypothetical protein; KEGG: eca:ECA0545 alternative C-terminus for the PilV protein (fragment); hypothetical protein complement(678818..679291) Pectobacterium wasabiae WPP163 8529003 YP_003258070.1 CDS Pecwa_0639 NC_013421.1 679339 680463 D PFAM: integrase; KEGG: eca:ECA0546 shufflon-specific DNA recombinase; integrase 679339..680463 Pectobacterium wasabiae WPP163 8529004 YP_003258071.1 CDS Pecwa_0640 NC_013421.1 680568 681371 D KEGG: spq:SPAB_05369 hypothetical protein; hypothetical protein 680568..681371 Pectobacterium wasabiae WPP163 8529005 YP_003258072.1 CDS Pecwa_0641 NC_013421.1 681380 682087 D KEGG: spq:SPAB_05370 hypothetical protein; hypothetical protein 681380..682087 Pectobacterium wasabiae WPP163 8529006 YP_003258073.1 CDS Pecwa_0642 NC_013421.1 682066 682716 D PFAM: lytic transglycosylase catalytic; KEGG: ypi:YpsIP31758_3720 transglycosylase SLT domain-containing protein; lytic transglycosylase 682066..682716 Pectobacterium wasabiae WPP163 8529007 YP_003258074.1 CDS Pecwa_0643 NC_013421.1 682713 683264 D KEGG: yen:YE3494 hypothetical protein; hypothetical protein 682713..683264 Pectobacterium wasabiae WPP163 8529008 YP_003258075.1 CDS Pecwa_0644 NC_013421.1 683279 683815 D KEGG: eca:ECA0559 hypothetical protein; hypothetical protein 683279..683815 Pectobacterium wasabiae WPP163 8529009 YP_003258076.1 CDS Pecwa_0645 NC_013421.1 683808 685919 D KEGG: yen:YE3493 TraG-family protein; TraG-family protein 683808..685919 Pectobacterium wasabiae WPP163 8529010 YP_003258077.1 CDS Pecwa_0646 NC_013421.1 685919 686671 D KEGG: yen:YE3492 inner membrane protein; inner membrane protein 685919..686671 Pectobacterium wasabiae WPP163 8529011 YP_003258078.1 CDS Pecwa_0647 NC_013421.1 687024 687542 D TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: pct:PC1_3239 type VI secretion system effector, Hcp1 family; type VI secretion system effector 687024..687542 Pectobacterium wasabiae WPP163 8529012 YP_003258079.1 CDS Pecwa_0648 NC_013421.1 687663 689492 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 rhs accessory genetic element; ImpA family type VI secretion-associated protein 687663..689492 Pectobacterium wasabiae WPP163 8529013 YP_003258080.1 CDS Pecwa_0649 NC_013421.1 689521 689964 D PFAM: Domain of unknown function DUF1795; KEGG: eca:ECA2868 hypothetical protein; hypothetical protein 689521..689964 Pectobacterium wasabiae WPP163 8529014 YP_003258081.1 CDS Pecwa_0650 NC_013421.1 689957 694225 D TIGRFAM: hypothetical protein; PFAM: PAAR repeat-containing protein; hypothetical protein; KEGG: eca:ECA2869 rhs protein; hypothetical protein 689957..694225 Pectobacterium wasabiae WPP163 8529015 YP_003258082.1 CDS Pecwa_0651 NC_013421.1 694222 694779 D KEGG: bcj:BCAS0661B hypothetical protein; hypothetical protein 694222..694779 Pectobacterium wasabiae WPP163 8529016 YP_003258083.1 CDS Pecwa_0652 NC_013421.1 694946 695254 D PFAM: protein of unknown function, RAQPRD; KEGG: yen:YE3490 hypothetical protein; hypothetical protein 694946..695254 Pectobacterium wasabiae WPP163 8529017 YP_003258084.1 CDS Pecwa_0653 NC_013421.1 695251 695487 D KEGG: pmr:PMI2584 hypothetical protein; hypothetical protein 695251..695487 Pectobacterium wasabiae WPP163 8529018 YP_003258085.1 CDS Pecwa_0654 NC_013421.1 695516 695875 D KEGG: ypi:YpsIP31758_3711 hypothetical protein; hypothetical protein 695516..695875 Pectobacterium wasabiae WPP163 8529019 YP_003258086.1 CDS Pecwa_0655 NC_013421.1 695887 696261 D KEGG: spq:SPAB_05381 hypothetical protein; hypothetical protein 695887..696261 Pectobacterium wasabiae WPP163 8529020 YP_003258087.1 CDS Pecwa_0656 NC_013421.1 696258 696917 D KEGG: ypi:YpsIP31758_3709 hypothetical protein; hypothetical protein 696258..696917 Pectobacterium wasabiae WPP163 8529021 YP_003258088.1 CDS Pecwa_0657 NC_013421.1 696914 697810 D KEGG: ypi:YpsIP31758_3708 hypothetical protein; hypothetical protein 696914..697810 Pectobacterium wasabiae WPP163 8529022 YP_003258089.1 CDS Pecwa_0658 NC_013421.1 697807 699348 D KEGG: ypi:YpsIP31758_3707 hypothetical protein; hypothetical protein 697807..699348 Pectobacterium wasabiae WPP163 8529023 YP_003258090.1 CDS Pecwa_0659 NC_013421.1 699351 700154 D KEGG: ecq:ECED1_3575 hypothetical protein; hypothetical protein 699351..700154 Pectobacterium wasabiae WPP163 8529024 YP_003258091.1 CDS Pecwa_0660 NC_013421.1 700141 700602 D KEGG: eca:ECA0571 hypothetical protein; hypothetical protein 700141..700602 Pectobacterium wasabiae WPP163 8529025 YP_003258092.1 CDS Pecwa_0661 NC_013421.1 700595 701005 D KEGG: spq:SPAB_05386 hypothetical protein; hypothetical protein 700595..701005 Pectobacterium wasabiae WPP163 8529026 YP_003258093.1 CDS Pecwa_0662 NC_013421.1 701005 703830 D KEGG: ypi:YpsIP31758_3705 hypothetical protein; hypothetical protein 701005..703830 Pectobacterium wasabiae WPP163 8529027 YP_003258094.1 CDS Pecwa_0663 NC_013421.1 703827 704225 D KEGG: spq:SPAB_05389 hypothetical protein; hypothetical protein 703827..704225 Pectobacterium wasabiae WPP163 8529028 YP_003258095.1 CDS Pecwa_0664 NC_013421.1 704395 705297 D KEGG: elf:LF82_p665 hypothetical protein; hypothetical protein 704395..705297 Pectobacterium wasabiae WPP163 8529029 YP_003258096.1 CDS Pecwa_0665 NC_013421.1 705294 705521 R KEGG: hso:HS_1734 hypothetical protein; hypothetical protein complement(705294..705521) Pectobacterium wasabiae WPP163 8529030 YP_003258097.1 CDS Pecwa_0666 NC_013421.1 705711 708098 D KEGG: bvi:Bcep1808_7657 hypothetical protein; hypothetical protein 705711..708098 Pectobacterium wasabiae WPP163 8529031 YP_003258098.1 CDS Pecwa_0667 NC_013421.1 708322 708594 D PFAM: Insertion element protein; KEGG: sdy:SDY_P213 iso-IS1 ORF1; Insertion element protein 708322..708594 Pectobacterium wasabiae WPP163 8529032 YP_003258099.1 CDS Pecwa_0669 NC_013421.1 709059 710021 D KEGG: ecv:APECO1_381 hypothetical protein; hypothetical protein 709059..710021 Pectobacterium wasabiae WPP163 8529034 YP_003258100.1 CDS Pecwa_0670 NC_013421.1 710037 711038 D KEGG: ecz:ECS88_1342 conserved hypothetical protein from phage origin; hypothetical protein 710037..711038 Pectobacterium wasabiae WPP163 8529035 YP_003258101.1 CDS Pecwa_0671 NC_013421.1 711295 712284 R PFAM: RelA/SpoT domain protein; KEGG: yen:YE3463 hypothetical protein; RelA/SpoT domain-containing protein complement(711295..712284) Pectobacterium wasabiae WPP163 8529036 YP_003258102.1 CDS Pecwa_0672 NC_013421.1 712281 713372 R KEGG: yen:YE3462 hypothetical protein; hypothetical protein complement(712281..713372) Pectobacterium wasabiae WPP163 8529037 YP_003258103.1 CDS Pecwa_0673 NC_013421.1 713388 713834 R KEGG: amc:MADE_00113 hypothetical protein; hypothetical protein complement(713388..713834) Pectobacterium wasabiae WPP163 8529038 YP_003258104.1 CDS Pecwa_0674 NC_013421.1 714261 714812 D KEGG: sew:SeSA_A1660 sefir domain protein; hypothetical protein 714261..714812 Pectobacterium wasabiae WPP163 8529039 YP_003258105.1 CDS Pecwa_0676 NC_013421.1 715768 718461 D KEGG: vfm:VFMJ11_B0190 ATPase involved in DNA repair; DNA repair ATPase 715768..718461 Pectobacterium wasabiae WPP163 8529041 YP_003258106.1 CDS Pecwa_0678 NC_013421.1 718870 719274 D PFAM: protein of unknown function DUF1525; KEGG: ypi:YpsIP31758_3702 hypothetical protein; hypothetical protein 718870..719274 Pectobacterium wasabiae WPP163 8529043 YP_003258107.1 CDS Pecwa_0679 NC_013421.1 719271 720239 D PFAM: protein of unknown function DUF1527; KEGG: spq:SPAB_05391 hypothetical protein; hypothetical protein 719271..720239 Pectobacterium wasabiae WPP163 8529044 YP_003258108.1 CDS Pecwa_0680 NC_013421.1 720255 721682 D KEGG: spq:SPAB_05392 hypothetical protein; hypothetical protein 720255..721682 Pectobacterium wasabiae WPP163 8529045 YP_003258109.1 CDS Pecwa_0681 NC_013421.1 721685 722029 D KEGG: spq:SPAB_05393 hypothetical protein; hypothetical protein 721685..722029 Pectobacterium wasabiae WPP163 8529046 YP_003258110.1 CDS Pecwa_0682 NC_013421.1 722039 723604 D KEGG: ypi:YpsIP31758_3699 hypothetical protein; hypothetical protein 722039..723604 Pectobacterium wasabiae WPP163 8529047 YP_003258111.1 CDS Pecwa_0683 NC_013421.1 723640 723909 R KEGG: spq:SPAB_05395 hypothetical protein; hypothetical protein complement(723640..723909) Pectobacterium wasabiae WPP163 8529048 YP_003258112.1 CDS Pecwa_0684 NC_013421.1 724014 724736 D KEGG: ecq:ECED1_3539 hypothetical protein; hypothetical protein 724014..724736 Pectobacterium wasabiae WPP163 8529049 YP_003258113.1 CDS Pecwa_0685 NC_013421.1 724883 725731 R hypothetical protein complement(724883..725731) Pectobacterium wasabiae WPP163 8529050 YP_003258114.1 CDS Pecwa_0686 NC_013421.1 726654 727541 D KEGG: eca:ECA0587 hypothetical protein; hypothetical protein 726654..727541 Pectobacterium wasabiae WPP163 8529051 YP_003258115.1 CDS Pecwa_0687 NC_013421.1 727575 727769 D hypothetical protein 727575..727769 Pectobacterium wasabiae WPP163 8529052 YP_003258116.1 CDS Pecwa_0688 NC_013421.1 728108 728455 D KEGG: eca:ECA0590 hypothetical protein; hypothetical protein 728108..728455 Pectobacterium wasabiae WPP163 8529053 YP_003258117.1 CDS Pecwa_0689 NC_013421.1 728537 729052 D KEGG: eca:ECA0591 hypothetical protein; hypothetical protein 728537..729052 Pectobacterium wasabiae WPP163 8529054 YP_003258118.1 CDS Pecwa_0690 NC_013421.1 729141 729545 D KEGG: eca:ECA0592 hypothetical protein; hypothetical protein 729141..729545 Pectobacterium wasabiae WPP163 8529055 YP_003258119.1 CDS Pecwa_0691 NC_013421.1 729644 730114 D KEGG: eca:ECA0592 hypothetical protein; hypothetical protein 729644..730114 Pectobacterium wasabiae WPP163 8529056 YP_003258120.1 CDS Pecwa_0692 NC_013421.1 730220 730696 D TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: eca:ECA0593 DNA repair protein; DNA repair protein RadC 730220..730696 Pectobacterium wasabiae WPP163 8529057 YP_003258121.1 CDS Pecwa_0693 NC_013421.1 730788 731003 D KEGG: sei:SPC_4443 hypothetical protein; hypothetical protein 730788..731003 Pectobacterium wasabiae WPP163 8529058 YP_003258122.1 CDS Pecwa_0694 NC_013421.1 731015 731470 D KEGG: eca:ECA0594 hypothetical protein; hypothetical protein 731015..731470 Pectobacterium wasabiae WPP163 8529059 YP_003258123.1 CDS Pecwa_0695 NC_013421.1 731467 731739 D KEGG: eca:ECA0595 hypothetical protein; hypothetical protein 731467..731739 Pectobacterium wasabiae WPP163 8529060 YP_003258124.1 CDS Pecwa_0696 NC_013421.1 731811 732296 D KEGG: eca:ECA0596 hypothetical protein; hypothetical protein 731811..732296 Pectobacterium wasabiae WPP163 8529061 YP_003258125.1 CDS Pecwa_0697 NC_013421.1 732361 734322 D PFAM: domain of unknown function DUF1738; KEGG: eca:ECA0597 hypothetical protein; hypothetical protein 732361..734322 Pectobacterium wasabiae WPP163 8529062 YP_003258126.1 CDS Pecwa_0698 NC_013421.1 734396 735289 D KEGG: eca:ECA0598 hypothetical protein; hypothetical protein 734396..735289 Pectobacterium wasabiae WPP163 8529063 YP_003258127.1 CDS Pecwa_0699 NC_013421.1 735368 736294 D KEGG: eca:ECA0599 hypothetical protein; hypothetical protein 735368..736294 Pectobacterium wasabiae WPP163 8529064 YP_003258128.1 CDS Pecwa_0700 NC_013421.1 736379 736672 R hypothetical protein complement(736379..736672) Pectobacterium wasabiae WPP163 8529065 YP_003258129.1 CDS Pecwa_0701 NC_013421.1 736693 737391 R KEGG: eca:ECA0552 hypothetical protein; hypothetical protein complement(736693..737391) Pectobacterium wasabiae WPP163 8529066 YP_003258130.1 CDS Pecwa_0702 NC_013421.1 737403 738194 R hypothetical protein complement(737403..738194) Pectobacterium wasabiae WPP163 8529067 YP_003258131.1 CDS Pecwa_0703 NC_013421.1 738194 738658 R KEGG: ent:Ent638_1000 hypothetical protein; hypothetical protein complement(738194..738658) Pectobacterium wasabiae WPP163 8529068 YP_003258132.1 CDS Pecwa_0704 NC_013421.1 738690 739340 R hypothetical protein complement(738690..739340) Pectobacterium wasabiae WPP163 8529069 YP_003258133.1 CDS Pecwa_0705 NC_013421.1 739437 740636 R KEGG: eca:ECA0549 plasmid transfer protein; plasmid transfer protein complement(739437..740636) Pectobacterium wasabiae WPP163 8529070 YP_003258134.1 CDS Pecwa_0706 NC_013421.1 740782 741777 R KEGG: spq:SPAB_05446 hypothetical protein; hypothetical protein complement(740782..741777) Pectobacterium wasabiae WPP163 8529071 YP_003258135.1 CDS Pecwa_0707 NC_013421.1 741866 742501 R KEGG: ypi:YpsIP31758_3688 hypothetical protein; hypothetical protein complement(741866..742501) Pectobacterium wasabiae WPP163 8529072 YP_003258136.1 CDS Pecwa_0708 NC_013421.1 742513 742653 D hypothetical protein 742513..742653 Pectobacterium wasabiae WPP163 8529073 YP_003258137.1 CDS Pecwa_0709 NC_013421.1 742694 744151 D PFAM: protein of unknown function DUF1528; relaxase; KEGG: spq:SPAB_05448 hypothetical protein; hypothetical protein 742694..744151 Pectobacterium wasabiae WPP163 8529074 YP_003258138.1 CDS Pecwa_0710 NC_013421.1 744192 745166 D PFAM: integrase; KEGG: yen:YE3450 phage integrase; integrase 744192..745166 Pectobacterium wasabiae WPP163 8529075 YP_003258139.1 CDS Pecwa_0711 NC_013421.1 745763 746905 D PFAM: filamentation induced by cAMP protein Fic; KEGG: eca:ECA0515 hypothetical protein; filamentation induced by cAMP protein fic 745763..746905 Pectobacterium wasabiae WPP163 8529076 YP_003258140.1 CDS Pecwa_0712 NC_013421.1 747128 749140 R KEGG: glo:Glov_0280 hypothetical protein; hypothetical protein complement(747128..749140) Pectobacterium wasabiae WPP163 8529077 YP_003258141.1 CDS Pecwa_0713 NC_013421.1 749153 749752 R PFAM: Domain of unknown function DUF1863; KEGG: sun:SUN_2116 hypothetical protein; hypothetical protein complement(749153..749752) Pectobacterium wasabiae WPP163 8529078 YP_003258142.1 CDS Pecwa_0715 NC_013421.1 750348 750809 D KEGG: pct:PC1_0868 hypothetical protein; hypothetical protein 750348..750809 Pectobacterium wasabiae WPP163 8529080 YP_003258143.1 CDS Pecwa_0716 NC_013421.1 750806 751027 D KEGG: pct:PC1_0869 transcriptional regulator, Nlp; transcriptional regulator, Nlp 750806..751027 Pectobacterium wasabiae WPP163 8529081 YP_003258144.1 CDS Pecwa_0717 NC_013421.1 751196 751744 D KEGG: pct:PC1_0870 hypothetical protein; hypothetical protein 751196..751744 Pectobacterium wasabiae WPP163 8529082 YP_003258145.1 CDS Pecwa_0718 NC_013421.1 751931 753190 R PFAM: integrase; KEGG: pct:PC1_0871 integrase; integrase complement(751931..753190) Pectobacterium wasabiae WPP163 8529083 YP_003258146.1 CDS Pecwa_0719 NC_013421.1 753601 754446 D PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA0615 AraC family transcription regulator; AraC family transcriptional regulator 753601..754446 Pectobacterium wasabiae WPP163 8529085 YP_003258147.1 CDS Pecwa_0720 NC_013421.1 754482 755072 D PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA0616 hypothetical protein; lysine exporter protein LysE/YggA 754482..755072 Pectobacterium wasabiae WPP163 8529086 YP_003258148.1 CDS Pecwa_0721 NC_013421.1 755069 755644 R KEGG: eca:ECA0617 transcriptional regulator; transcriptional regulator complement(755069..755644) Pectobacterium wasabiae WPP163 8529087 YP_003258149.1 CDS dipZ NC_013421.1 755687 757438 R two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein complement(755687..757438) Pectobacterium wasabiae WPP163 8529088 YP_003258150.1 CDS Pecwa_0723 NC_013421.1 757414 757746 R copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA complement(757414..757746) Pectobacterium wasabiae WPP163 8529089 YP_003258151.1 CDS Pecwa_0724 NC_013421.1 757878 759179 R functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter complement(757878..759179) Pectobacterium wasabiae WPP163 8529090 YP_003258152.1 CDS aspA NC_013421.1 759568 761007 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(759568..761007) Pectobacterium wasabiae WPP163 8529091 YP_003258153.1 CDS Pecwa_0726 NC_013421.1 761508 761978 D PFAM: FxsA cytoplasmic membrane protein; KEGG: eca:ECA0623 suppressor of F plamsid exlusion of phage T7; FxsA cytoplasmic membrane protein 761508..761978 Pectobacterium wasabiae WPP163 8529092 YP_003258154.1 CDS groES NC_013421.1 762215 762508 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 762215..762508 Pectobacterium wasabiae WPP163 8529093 YP_003258155.1 CDS groEL NC_013421.1 762554 764200 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 762554..764200 Pectobacterium wasabiae WPP163 8529094 YP_003258156.1 CDS ubiC NC_013421.1 764477 765010 D catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase 764477..765010 Pectobacterium wasabiae WPP163 8529095 YP_003258157.1 CDS ubiA NC_013421.1 765023 765886 D catalyzes the conversion of 4-hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 765023..765886 Pectobacterium wasabiae WPP163 8529096 YP_003258158.1 CDS Pecwa_0731 NC_013421.1 766027 768495 R PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase complement(766027..768495) Pectobacterium wasabiae WPP163 8529097 YP_003258159.1 CDS Pecwa_0732 NC_013421.1 768624 768989 D PFAM: diacylglycerol kinase; KEGG: pct:PC1_0513 diacylglycerol kinase; diacylglycerol kinase 768624..768989 Pectobacterium wasabiae WPP163 8529098 YP_003258160.1 CDS Pecwa_0733 NC_013421.1 769100 769708 D Represses a number of genes involved in the response to DNA damage; LexA repressor 769100..769708 Pectobacterium wasabiae WPP163 8529099 YP_003258161.1 CDS Pecwa_0734 NC_013421.1 769738 770253 R Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; zinc uptake transcriptional repressor complement(769738..770253) Pectobacterium wasabiae WPP163 8529100 YP_003258162.1 CDS Pecwa_0735 NC_013421.1 770354 771052 R PFAM: pirin; KEGG: eca:ECA0633 hypothetical protein; pirin complement(770354..771052) Pectobacterium wasabiae WPP163 8529101 YP_003258163.1 CDS Pecwa_0736 NC_013421.1 771165 772061 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_0518 LysR family transcriptional regulator; LysR family transcriptional regulator 771165..772061 Pectobacterium wasabiae WPP163 8529102 YP_003258164.1 CDS Pecwa_0737 NC_013421.1 772133 773128 R KEGG: pct:PC1_0519 glutathione transferase; glutathione transferase complement(772133..773128) Pectobacterium wasabiae WPP163 8529103 YP_003258165.1 CDS Pecwa_0738 NC_013421.1 773237 773632 R PFAM: DoxX family protein; KEGG: pct:PC1_0520 DoxX family protein; DoxX family protein complement(773237..773632) Pectobacterium wasabiae WPP163 8529104 YP_003258166.1 CDS Pecwa_0739 NC_013421.1 773907 774197 R KEGG: pct:PC1_0521 hypothetical protein; hypothetical protein complement(773907..774197) Pectobacterium wasabiae WPP163 8529105 YP_003258167.1 CDS Pecwa_0740 NC_013421.1 774194 774589 R PFAM: protein of unknown function DUF2311, membrane; KEGG: eca:ECA0638 hypothetical protein; hypothetical protein complement(774194..774589) Pectobacterium wasabiae WPP163 8529106 YP_003258168.1 CDS Pecwa_0741 NC_013421.1 774603 774908 R PFAM: protein of unknown function DUF883 ElaB; KEGG: eca:ECA0639 hypothetical protein; hypothetical protein complement(774603..774908) Pectobacterium wasabiae WPP163 8529107 YP_003258169.1 CDS Pecwa_0742 NC_013421.1 775185 775580 R KEGG: pct:PC1_0525 hypothetical protein; hypothetical protein complement(775185..775580) Pectobacterium wasabiae WPP163 8529108 YP_003258170.1 CDS Pecwa_0743 NC_013421.1 775583 776266 R PFAM: SNARE associated Golgi protein; KEGG: eca:ECA0642 DedA family membrane protein; hypothetical protein complement(775583..776266) Pectobacterium wasabiae WPP163 8529109 YP_003258171.1 CDS Pecwa_0744 NC_013421.1 776752 777528 R regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; ExuR family transcriptional regulator complement(776752..777528) Pectobacterium wasabiae WPP163 8529110 YP_003258172.1 CDS Pecwa_0745 NC_013421.1 777736 779037 R TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0644 galacturonate transporter; d-galactonate transporter complement(777736..779037) Pectobacterium wasabiae WPP163 8529111 YP_003258173.1 CDS Pecwa_0746 NC_013421.1 779458 780867 D catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 779458..780867 Pectobacterium wasabiae WPP163 8529112 YP_003258174.1 CDS Pecwa_0747 NC_013421.1 781073 782539 D catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 781073..782539 Pectobacterium wasabiae WPP163 8529113 YP_003258175.1 CDS Pecwa_0748 NC_013421.1 782559 784049 D PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; KEGG: eca:ECA0647 altronate hydrolase; altronate dehydratase 782559..784049 Pectobacterium wasabiae WPP163 8529114 YP_003258176.1 CDS Pecwa_0749 NC_013421.1 784139 784669 D PFAM: protein of unknown function, inner membrane,YgjV; KEGG: eca:ECA0648 hypothetical protein; hypothetical protein 784139..784669 Pectobacterium wasabiae WPP163 8529115 YP_003258177.1 CDS Pecwa_0750 NC_013421.1 784756 786003 R involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT complement(784756..786003) Pectobacterium wasabiae WPP163 8529116 YP_003258178.1 CDS Pecwa_0751 NC_013421.1 786293 787246 R PFAM: integral membrane protein TerC; KEGG: eca:ECA0652 hypothetical protein; integral membrane protein TerC complement(786293..787246) Pectobacterium wasabiae WPP163 8529117 YP_003258179.1 CDS Pecwa_0752 NC_013421.1 787626 788624 R PFAM: oxidoreductase domain protein; KEGG: eca:ECA0653 oxidoreductase; oxidoreductase domain-containing protein complement(787626..788624) Pectobacterium wasabiae WPP163 8529118 YP_003258180.1 CDS Pecwa_0753 NC_013421.1 788786 789925 D PFAM: methyltransferase small; KEGG: pct:PC1_0536 rRNA (guanine-N(2)-)-methyltransferase; rRNA (guanine-N(2)-)-methyltransferase 788786..789925 Pectobacterium wasabiae WPP163 8529119 YP_003258181.1 CDS Pecwa_0754 NC_013421.1 789942 791999 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pct:PC1_0537 2,4-dienoyl-CoA reductase (NADPH); NADH:flavin oxidoreductase complement(789942..791999) Pectobacterium wasabiae WPP163 8529120 YP_003258182.1 CDS Pecwa_0755 NC_013421.1 792215 792511 D KEGG: pct:PC1_0538 hypothetical protein; hypothetical protein 792215..792511 Pectobacterium wasabiae WPP163 8529121 YP_003258183.1 CDS Pecwa_0756 NC_013421.1 792699 793187 D periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; hypothetical protein 792699..793187 Pectobacterium wasabiae WPP163 8529122 YP_003258184.1 CDS Pecwa_0757 NC_013421.1 793389 794858 D KEGG: eca:ECA0659 signaling membrane protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 793389..794858 Pectobacterium wasabiae WPP163 8529123 YP_003258185.1 CDS Pecwa_0758 NC_013421.1 795153 797114 D TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: eca:ECA0661 PTS system, beta-glucoside-specific IIABC component; PTS system beta-glucoside-specific transporter subunit IIABC 795153..797114 Pectobacterium wasabiae WPP163 8529124 YP_003258186.1 CDS Pecwa_0759 NC_013421.1 797170 798006 D PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: dda:Dd703_1406 transcriptional antiterminator, BglG; transcriptional antiterminator BglG 797170..798006 Pectobacterium wasabiae WPP163 8529125 YP_003258187.1 CDS Pecwa_0760 NC_013421.1 798312 799934 D PFAM: porin; KEGG: eca:ECA1872 porin; porin 798312..799934 Pectobacterium wasabiae WPP163 8529126 YP_003258188.1 CDS Pecwa_0761 NC_013421.1 799947 801413 D PFAM: protein of unknown function DUF1593; KEGG: tau:Tola_0222 protein of unknown function DUF1593; hypothetical protein 799947..801413 Pectobacterium wasabiae WPP163 8529127 YP_003258189.1 CDS Pecwa_0762 NC_013421.1 801542 803272 D PFAM: sulfatase; KEGG: cps:CPS_2367 sulfatase family protein; sulfatase 801542..803272 Pectobacterium wasabiae WPP163 8529128 YP_003258190.1 CDS Pecwa_0763 NC_013421.1 803346 804569 D PFAM: radical SAM protein; KEGG: pct:PC1_2436 radical SAM protein; radical SAM protein 803346..804569 Pectobacterium wasabiae WPP163 8529129 YP_003258191.1 CDS Pecwa_0764 NC_013421.1 804629 806308 D PFAM: sulfatase; KEGG: pct:PC1_2434 sulfatase; sulfatase 804629..806308 Pectobacterium wasabiae WPP163 8529130 YP_003258192.1 CDS Pecwa_0766 NC_013421.1 806913 808397 R KEGG: pmr:PMI0288 glycoporin; glycoporin complement(806913..808397) Pectobacterium wasabiae WPP163 8529132 YP_003258193.1 CDS Pecwa_0767 NC_013421.1 808476 809138 R TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: pmr:PMI0289 beta-phosphoglucomutase; beta-phosphoglucomutase complement(808476..809138) Pectobacterium wasabiae WPP163 8529133 YP_003258194.1 CDS Pecwa_0768 NC_013421.1 809143 811857 R PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: pmr:PMI0290 glycosyl hydrolase; trehalose 6-phosphate phosphorylase complement(809143..811857) Pectobacterium wasabiae WPP163 8529134 YP_003258195.1 CDS Pecwa_0769 NC_013421.1 811883 813307 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunit IIBC complement(811883..813307) Pectobacterium wasabiae WPP163 8529135 YP_003258196.1 CDS treR NC_013421.1 813439 814380 R regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor complement(813439..814380) Pectobacterium wasabiae WPP163 8529136 YP_003258197.1 CDS Pecwa_0771 NC_013421.1 814588 815976 R PFAM: glycoside hydrolase family 1; KEGG: eca:ECA0662 6-phospho-beta-glucosidase; glycoside hydrolase family 1 complement(814588..815976) Pectobacterium wasabiae WPP163 8529137 YP_003258198.1 CDS Pecwa_0772 NC_013421.1 816056 816223 D KEGG: pct:PC1_0544 hypothetical protein; hypothetical protein 816056..816223 Pectobacterium wasabiae WPP163 8529138 YP_003258199.1 CDS Pecwa_0773 NC_013421.1 816608 820831 D PFAM: molybdopterin oxidoreductase; flavodoxin/nitric oxide synthase; molybdopterin oxidoreductase Fe4S4 region; FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; molydopterin dinucleotide-binding region; KEGG: pct:PC1_0546 molybdopterin oxidoreductase; molybdopterin oxidoreductase 816608..820831 Pectobacterium wasabiae WPP163 8529139 YP_003258200.1 CDS Pecwa_0774 NC_013421.1 820907 821671 R PFAM: ThiJ/PfpI domain protein; KEGG: dze:Dd1591_2067 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein complement(820907..821671) Pectobacterium wasabiae WPP163 8529140 YP_003258201.1 CDS Pecwa_0775 NC_013421.1 821850 822752 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dze:Dd1591_2066 LysR family transcriptional regulator; LysR family transcriptional regulator 821850..822752 Pectobacterium wasabiae WPP163 8529141 YP_003258202.1 CDS Pecwa_0776 NC_013421.1 822960 823694 R PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: kpe:KPK_B0037 GntR family transcriptional regulator; GntR family transcriptional regulator complement(822960..823694) Pectobacterium wasabiae WPP163 8529142 YP_003258203.1 CDS Pecwa_0777 NC_013421.1 824198 826195 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 824198..826195 Pectobacterium wasabiae WPP163 8529143 YP_003258204.1 CDS Pecwa_0778 NC_013421.1 826238 826699 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sgl:SG2041 PTS system IIA component; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 826238..826699 Pectobacterium wasabiae WPP163 8529144 YP_003258205.1 CDS Pecwa_0779 NC_013421.1 826736 827008 D PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: sgl:SG2042 PTS system IIB component; PTS system lactose/cellobiose-specific transporter subunit IIB 826736..827008 Pectobacterium wasabiae WPP163 8529145 YP_003258206.1 CDS ulaA NC_013421.1 827048 828421 D membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 827048..828421 Pectobacterium wasabiae WPP163 8529146 YP_003258207.1 CDS Pecwa_0781 NC_013421.1 828771 829493 D KEGG: bcj:BCAM1700 acetyltransferase; acetyltransferase 828771..829493 Pectobacterium wasabiae WPP163 8529147 YP_003258208.1 CDS Pecwa_0782 NC_013421.1 830071 830574 D PFAM: uracil-DNA glycosylase superfamily; KEGG: eca:ECA0679 G/U mismatch-specific DNA glycosylase; G/U mismatch-specific DNA glycosylase 830071..830574 Pectobacterium wasabiae WPP163 8529149 YP_003258209.1 CDS Pecwa_0783 NC_013421.1 830672 832507 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(830672..832507) Pectobacterium wasabiae WPP163 8529150 YP_003258210.1 CDS dnaG NC_013421.1 832662 834416 R synthesizes RNA primers at the replication forks; DNA primase complement(832662..834416) Pectobacterium wasabiae WPP163 8529151 YP_003258211.1 CDS rpsU NC_013421.1 834570 834785 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(834570..834785) Pectobacterium wasabiae WPP163 8529152 YP_003258212.1 CDS Pecwa_0786 NC_013421.1 835013 836026 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 835013..836026 Pectobacterium wasabiae WPP163 8529153 YP_003258213.1 CDS Pecwa_0787 NC_013421.1 836096 836566 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(836096..836566) Pectobacterium wasabiae WPP163 8529154 YP_003258214.1 CDS Pecwa_0788 NC_013421.1 837037 837972 D oxidizes malate to oxaloacetate; malate dehydrogenase 837037..837972 Pectobacterium wasabiae WPP163 8529155 YP_003258215.1 CDS Pecwa_0789 NC_013421.1 838036 838299 R KEGG: eca:ECA0686 sugar fermentation stimulation protein; transcriptional regulator, Nlp complement(838036..838299) Pectobacterium wasabiae WPP163 8529156 YP_003258216.1 CDS Pecwa_0790 NC_013421.1 838488 838874 D PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: pct:PC1_0555 MuA-transposase/repressor protein CI DNA-binding; MuA-transposase/repressor protein CI DNA-binding protein 838488..838874 Pectobacterium wasabiae WPP163 8529157 YP_003258217.1 CDS Pecwa_0791 NC_013421.1 839123 839497 D PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: eca:ECA0688 hypothetical protein; MuA-transposase/repressor protein CI DNA-binding protein 839123..839497 Pectobacterium wasabiae WPP163 8529158 YP_003258218.1 CDS Pecwa_0792 NC_013421.1 839569 840540 R PFAM: polyprenyl synthetase; KEGG: pct:PC1_0557 trans-hexaprenyltranstransferase; octaprenyl diphosphate synthase complement(839569..840540) Pectobacterium wasabiae WPP163 8529159 YP_003258219.1 CDS rplU NC_013421.1 840798 841109 D TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: pct:PC1_0558 ribosomal protein L21; 50S ribosomal protein L21 840798..841109 Pectobacterium wasabiae WPP163 8529160 YP_003258220.1 CDS rpmA NC_013421.1 841128 841385 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 841128..841385 Pectobacterium wasabiae WPP163 8529161 YP_003258221.1 CDS Pecwa_0795 NC_013421.1 841475 842437 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: pct:PC1_0560 hypothetical protein; hypothetical protein 841475..842437 Pectobacterium wasabiae WPP163 8529162 YP_003258222.1 CDS obgE NC_013421.1 842698 843870 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 842698..843870 Pectobacterium wasabiae WPP163 8529163 YP_003258223.1 CDS Pecwa_0797 NC_013421.1 843941 845374 R penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase complement(843941..845374) Pectobacterium wasabiae WPP163 8529164 YP_003258224.1 CDS greA NC_013421.1 845643 846122 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 845643..846122 Pectobacterium wasabiae WPP163 8529165 YP_003258225.1 CDS Pecwa_0799 NC_013421.1 846250 846543 R PFAM: protein of unknown function UPF0044; KEGG: pct:PC1_0564 hypothetical protein; hypothetical protein complement(846250..846543) Pectobacterium wasabiae WPP163 8529166 YP_003258226.1 CDS rrmJ NC_013421.1 846687 847316 D Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J 846687..847316 Pectobacterium wasabiae WPP163 8529167 YP_003258227.1 CDS Pecwa_0801 NC_013421.1 847364 849319 D KEGG: pct:PC1_0566 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH 847364..849319 Pectobacterium wasabiae WPP163 8529168 YP_003258228.1 CDS folP NC_013421.1 849437 850270 D catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; dihydropteroate synthase 849437..850270 Pectobacterium wasabiae WPP163 8529169 YP_003258229.1 CDS glmM NC_013421.1 850279 851616 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 850279..851616 Pectobacterium wasabiae WPP163 8529170 YP_003258230.1 CDS Pecwa_0804 NC_013421.1 851658 851855 D KEGG: eca:ECA0701 hypothetical protein; hypothetical protein 851658..851855 Pectobacterium wasabiae WPP163 8529171 YP_003258231.1 CDS secG NC_013421.1 851867 852199 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: eca:ECA0702 preprotein translocase subunit SecG; preprotein translocase subunit SecG 851867..852199 Pectobacterium wasabiae WPP163 8529172 YP_003258232.1 CDS Pecwa_0806 NC_013421.1 854128 854550 D PFAM: protein of unknown function DUF150; KEGG: pct:PC1_0583 hypothetical protein; hypothetical protein 854128..854550 Pectobacterium wasabiae WPP163 8529175 YP_003258233.1 CDS nusA NC_013421.1 854572 856101 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 854572..856101 Pectobacterium wasabiae WPP163 8529176 YP_003258234.1 CDS infB NC_013421.1 856127 858829 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 856127..858829 Pectobacterium wasabiae WPP163 8529177 YP_003258235.1 CDS rbfA NC_013421.1 858903 859301 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 858903..859301 Pectobacterium wasabiae WPP163 8529178 YP_003258236.1 CDS truB NC_013421.1 859301 860245 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 859301..860245 Pectobacterium wasabiae WPP163 8529179 YP_003258237.1 CDS rpsO NC_013421.1 860368 860637 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 860368..860637 Pectobacterium wasabiae WPP163 8529180 YP_003258238.1 CDS Pecwa_0812 NC_013421.1 860887 863007 D KEGG: pct:PC1_0589 polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 860887..863007 Pectobacterium wasabiae WPP163 8529181 YP_003258239.1 CDS Pecwa_0813 NC_013421.1 863145 864029 D lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 863145..864029 Pectobacterium wasabiae WPP163 8529182 YP_003258240.1 CDS Pecwa_0814 NC_013421.1 864204 866102 D participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD 864204..866102 Pectobacterium wasabiae WPP163 8529183 YP_003258241.1 CDS Pecwa_0815 NC_013421.1 866227 867234 R TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: pct:PC1_0592 luciferase-like monooxygenase; hypothetical protein complement(866227..867234) Pectobacterium wasabiae WPP163 8529184 YP_003258242.1 CDS Pecwa_0816 NC_013421.1 867326 867529 D KEGG: eca:ECA3326 hypothetical protein; hypothetical protein 867326..867529 Pectobacterium wasabiae WPP163 8529185 YP_003258243.1 CDS Pecwa_0817 NC_013421.1 867523 868401 R PFAM: peptidase U32; KEGG: eca:ECA0721 hypothetical protein; peptidase U32 complement(867523..868401) Pectobacterium wasabiae WPP163 8529186 YP_003258244.1 CDS Pecwa_0818 NC_013421.1 868413 869408 R PFAM: peptidase U32; KEGG: pct:PC1_0594 peptidase U32; peptidase U32 complement(868413..869408) Pectobacterium wasabiae WPP163 8529187 YP_003258245.1 CDS Pecwa_0819 NC_013421.1 869713 870288 D PFAM: sterol-binding domain protein; KEGG: eca:ECA0723 sterol transferase; sterol-binding domain protein 869713..870288 Pectobacterium wasabiae WPP163 8529188 YP_003258246.1 CDS Pecwa_0820 NC_013421.1 870282 870824 D PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0724 acetyltransferase; N-acetyltransferase GCN5 870282..870824 Pectobacterium wasabiae WPP163 8529189 YP_003258247.1 CDS Pecwa_0821 NC_013421.1 870808 871119 R PFAM: excinuclease ABC C subunit domain protein; KEGG: eca:ECA0725 GIY-YIG nuclease superfamily protein; GIY-YIG nuclease superfamily protein complement(870808..871119) Pectobacterium wasabiae WPP163 8529190 YP_003258248.1 CDS deoA NC_013421.1 871840 873168 D Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 871840..873168 Pectobacterium wasabiae WPP163 8529191 YP_003258249.1 CDS Pecwa_0823 NC_013421.1 873258 874481 D catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 873258..874481 Pectobacterium wasabiae WPP163 8529192 YP_003258250.1 CDS deoD NC_013421.1 874527 875246 D catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 874527..875246 Pectobacterium wasabiae WPP163 8529193 YP_003258251.1 CDS Pecwa_0825 NC_013421.1 875411 877690 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eca:ECA0731 ferric siderophore TonB-dependent receptor; TonB-dependent siderophore receptor 875411..877690 Pectobacterium wasabiae WPP163 8529194 YP_003258252.1 CDS Pecwa_0826 NC_013421.1 877779 878258 R PFAM: coagulation factor 5/8 type domain protein; KEGG: pct:PC1_0610 coagulation factor 5/8 type domain protein; coagulation factor 5/8 type domain-containing protein complement(877779..878258) Pectobacterium wasabiae WPP163 8529195 YP_003258253.1 CDS Pecwa_0827 NC_013421.1 878287 878442 D hypothetical protein 878287..878442 Pectobacterium wasabiae WPP163 8529196 YP_003258254.1 CDS rimI NC_013421.1 878461 878904 R alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase complement(878461..878904) Pectobacterium wasabiae WPP163 8529197 YP_003258255.1 CDS Pecwa_0829 NC_013421.1 878855 879286 R with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi complement(878855..879286) Pectobacterium wasabiae WPP163 8529198 YP_003258256.1 CDS rsmC NC_013421.1 879446 880489 D 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase 879446..880489 Pectobacterium wasabiae WPP163 8529199 YP_003258257.1 CDS Pecwa_0831 NC_013421.1 880494 881486 R PFAM: aldo/keto reductase; KEGG: eca:ECA0736 aldo/keto reductase; aldo/keto reductase complement(880494..881486) Pectobacterium wasabiae WPP163 8529200 YP_003258258.1 CDS Pecwa_0832 NC_013421.1 881600 882505 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0737 LysR family transcriptional regulator; LysR family transcriptional regulator 881600..882505 Pectobacterium wasabiae WPP163 8529201 YP_003258259.1 CDS Pecwa_0833 NC_013421.1 883107 883346 R PFAM: protein of unknown function DUF1435; KEGG: eca:ECA0738 hypothetical protein; hypothetical protein complement(883107..883346) Pectobacterium wasabiae WPP163 8529205 YP_003258260.1 CDS Pecwa_0834 NC_013421.1 883504 884406 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0739 LysR family transcriptional regulator; LysR family transcriptional regulator complement(883504..884406) Pectobacterium wasabiae WPP163 8529206 YP_003258261.1 CDS Pecwa_0835 NC_013421.1 884536 885318 D KEGG: eca:ECA0740 alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase; alpha-acetolactate decarboxylase 884536..885318 Pectobacterium wasabiae WPP163 8529207 YP_003258262.1 CDS Pecwa_0836 NC_013421.1 885340 887019 D catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 885340..887019 Pectobacterium wasabiae WPP163 8529208 YP_003258263.1 CDS Pecwa_0837 NC_013421.1 887120 888271 R TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; KEGG: pct:PC1_0621 lactaldehyde reductase; L-1,2-propanediol oxidoreductase complement(887120..888271) Pectobacterium wasabiae WPP163 8529209 YP_003258264.1 CDS gcvT NC_013421.1 888833 889948 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 888833..889948 Pectobacterium wasabiae WPP163 8529210 YP_003258265.1 CDS Pecwa_0839 NC_013421.1 890007 890399 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 890007..890399 Pectobacterium wasabiae WPP163 8529211 YP_003258266.1 CDS Pecwa_0840 NC_013421.1 890513 893386 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 890513..893386 Pectobacterium wasabiae WPP163 8529212 YP_003258267.1 CDS Pecwa_0841 NC_013421.1 893869 894741 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0748 binding-protein-dependent transporter protein; binding-protein-dependent transporters inner membrane component 893869..894741 Pectobacterium wasabiae WPP163 8529213 YP_003258268.1 CDS Pecwa_0842 NC_013421.1 894731 895630 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA0749 binding-protein-dependent transporter protein; binding-protein-dependent transporters inner membrane component 894731..895630 Pectobacterium wasabiae WPP163 8529214 YP_003258269.1 CDS Pecwa_0843 NC_013421.1 895877 896701 D PFAM: metallophosphoesterase; KEGG: eca:ECA0750 calcineurin-like phosphoesterase; metallophosphoesterase 895877..896701 Pectobacterium wasabiae WPP163 8529215 YP_003258270.1 CDS Pecwa_0844 NC_013421.1 896701 897789 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: pct:PC1_0630 ABC transporter; ABC transporter 896701..897789 Pectobacterium wasabiae WPP163 8529216 YP_003258271.1 CDS Pecwa_0845 NC_013421.1 897782 899089 D PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA0752 sugar ABC transporter periplasmic protein; extracellular solute-binding protein 897782..899089 Pectobacterium wasabiae WPP163 8529217 YP_003258272.1 CDS lacY NC_013421.1 899151 900413 R lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease complement(899151..900413) Pectobacterium wasabiae WPP163 8529218 YP_003258273.1 CDS Pecwa_0847 NC_013421.1 900506 902650 R PFAM: glycoside hydrolase clan GH-D; KEGG: eca:ECA0754 alpha-galactosidase; glycoside hydrolase clan GH-D complement(900506..902650) Pectobacterium wasabiae WPP163 8529219 YP_003258274.1 CDS Pecwa_0848 NC_013421.1 902861 903865 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA0755 LysR family raffinose operon repressor; LacI family transcriptional regulator complement(902861..903865) Pectobacterium wasabiae WPP163 8529220 YP_003258275.1 CDS Pecwa_0849 NC_013421.1 903919 904527 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: eca:ECA0756 hypothetical protein; metal dependent phosphohydrolase complement(903919..904527) Pectobacterium wasabiae WPP163 8529221 YP_003258276.1 CDS Pecwa_0850 NC_013421.1 904938 905585 D TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: eca:ECA0757 hypothetical protein; hemolysin III family channel protein 904938..905585 Pectobacterium wasabiae WPP163 8529222 YP_003258277.1 CDS Pecwa_0851 NC_013421.1 905640 906641 R physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator; global regulator complement(905640..906641) Pectobacterium wasabiae WPP163 8529223 YP_003258278.1 CDS Pecwa_0852 NC_013421.1 906869 907135 D PFAM: protein of unknown function DUF339; KEGG: pct:PC1_0638 hypothetical protein; hypothetical protein 906869..907135 Pectobacterium wasabiae WPP163 8529224 YP_003258279.1 CDS Pecwa_0853 NC_013421.1 907116 907529 D PFAM: protein of unknown function DUF1434; KEGG: eca:ECA0760 hypothetical protein; hypothetical protein 907116..907529 Pectobacterium wasabiae WPP163 8529225 YP_003258280.1 CDS Pecwa_0854 NC_013421.1 907755 908690 D PFAM: protein of unknown function DUF890; KEGG: eca:ECA0761 SAM-dependent methyltransferase; SAM-dependent methyltransferase 907755..908690 Pectobacterium wasabiae WPP163 8529226 YP_003258281.1 CDS Pecwa_0855 NC_013421.1 908778 909101 R KEGG: eca:ECA0762 lipoprotein; lipoprotein complement(908778..909101) Pectobacterium wasabiae WPP163 8529227 YP_003258282.1 CDS Pecwa_0856 NC_013421.1 909130 909648 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB complement(909130..909648) Pectobacterium wasabiae WPP163 8529228 YP_003258283.1 CDS Pecwa_0857 NC_013421.1 909976 910992 D PFAM: ABC transporter; NIL domain; SMART: AAA ATPase; KEGG: spe:Spro_1397 ABC transporter-related protein; ABC transporter 909976..910992 Pectobacterium wasabiae WPP163 8529229 YP_003258284.1 CDS Pecwa_0858 NC_013421.1 910985 911653 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spe:Spro_1396 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 910985..911653 Pectobacterium wasabiae WPP163 8529230 YP_003258285.1 CDS Pecwa_0859 NC_013421.1 911668 912489 D PFAM: NLPA lipoprotein; KEGG: spe:Spro_1395 NlpA lipoprotein; NLPA lipoprotein 911668..912489 Pectobacterium wasabiae WPP163 8529231 YP_003258286.1 CDS Pecwa_0860 NC_013421.1 912639 913964 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA0769 transporter; metabolite/H+ symporter, major facilitator superfamily (MFS) complement(912639..913964) Pectobacterium wasabiae WPP163 8529232 YP_003258287.1 CDS xerD NC_013421.1 914276 915175 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 914276..915175 Pectobacterium wasabiae WPP163 8529233 YP_003258288.1 CDS Pecwa_0862 NC_013421.1 915312 916028 D DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC 915312..916028 Pectobacterium wasabiae WPP163 8529234 YP_003258289.1 CDS Pecwa_0863 NC_013421.1 916041 917795 D 5'-3' single-stranded-DNA-specific exonuclease; ssDNA exonuclease RecJ 916041..917795 Pectobacterium wasabiae WPP163 8529235 YP_003258290.1 CDS prfB NC_013421.1 918176 919274 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 join(918176..918250,918252..919274) Pectobacterium wasabiae WPP163 8529236 YP_003258291.1 CDS lysS NC_013421.1 919283 920800 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 919283..920800 Pectobacterium wasabiae WPP163 8529237 YP_003258292.1 CDS Pecwa_0866 NC_013421.1 921081 921836 D PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA0775 AraC family transcription regulator; AraC family transcriptional regulator 921081..921836 Pectobacterium wasabiae WPP163 8529238 YP_003258293.1 CDS Pecwa_0867 NC_013421.1 921899 922582 D PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA0776 hypothetical protein; lysine exporter protein LysE/YggA 921899..922582 Pectobacterium wasabiae WPP163 8529239 YP_003258294.1 CDS Pecwa_0868 NC_013421.1 923028 924524 D PFAM: integrase; KEGG: sfx:S1981 integrase; integrase 923028..924524 Pectobacterium wasabiae WPP163 8529241 YP_003258295.1 CDS Pecwa_0869 NC_013421.1 925796 926491 D PFAM: Phage regulatory protein, Rha-like; KEGG: kpe:KPK_0786 hypothetical protein; Phage regulatory protein, Rha-like protein 925796..926491 Pectobacterium wasabiae WPP163 8529242 YP_003258296.1 CDS Pecwa_0870 NC_013421.1 926479 926730 D hypothetical protein 926479..926730 Pectobacterium wasabiae WPP163 8529243 YP_003258297.1 CDS Pecwa_0871 NC_013421.1 926851 927261 D KEGG: stt:t2949 hypothetical protein; hypothetical protein 926851..927261 Pectobacterium wasabiae WPP163 8529244 YP_003258298.1 CDS Pecwa_0872 NC_013421.1 927363 928529 D KEGG: eca:ECA2312 hypothetical protein; hypothetical protein 927363..928529 Pectobacterium wasabiae WPP163 8529245 YP_003258299.1 CDS Pecwa_0873 NC_013421.1 930144 930764 D PFAM: Resolvase domain; KEGG: ecs:ECs3240 resolvase; resolvase 930144..930764 Pectobacterium wasabiae WPP163 8529246 YP_003258300.1 CDS Pecwa_0874 NC_013421.1 931055 931831 D ECF subfamily RNA polymerase sigma-24 subunit 931055..931831 Pectobacterium wasabiae WPP163 8529247 YP_003258301.1 CDS Pecwa_0875 NC_013421.1 932068 932415 D hypothetical protein 932068..932415 Pectobacterium wasabiae WPP163 8529248 YP_003258302.1 CDS Pecwa_0876 NC_013421.1 932588 933517 D hypothetical protein 932588..933517 Pectobacterium wasabiae WPP163 8529249 YP_003258303.1 CDS Pecwa_0877 NC_013421.1 933501 934124 D hypothetical protein 933501..934124 Pectobacterium wasabiae WPP163 8529250 YP_003258304.1 CDS Pecwa_0878 NC_013421.1 934121 934393 D hypothetical protein 934121..934393 Pectobacterium wasabiae WPP163 8529251 YP_003258305.1 CDS Pecwa_0879 NC_013421.1 934393 934845 D hypothetical protein 934393..934845 Pectobacterium wasabiae WPP163 8529252 YP_003258306.1 CDS Pecwa_0880 NC_013421.1 935237 935773 D PFAM: HNH endonuclease; KEGG: ecg:E2348C_0680 predicted endonuclease; HNH endonuclease 935237..935773 Pectobacterium wasabiae WPP163 8529253 YP_003258307.1 CDS Pecwa_0881 NC_013421.1 935776 936177 R hypothetical protein complement(935776..936177) Pectobacterium wasabiae WPP163 8529254 YP_003258308.1 CDS Pecwa_0882 NC_013421.1 936279 936650 R hypothetical protein complement(936279..936650) Pectobacterium wasabiae WPP163 8529255 YP_003258309.1 CDS Pecwa_0883 NC_013421.1 936821 938035 R PFAM: integrase; KEGG: kpe:KPK_4425 site-specific recombinase, phage integrase family; integrase complement(936821..938035) Pectobacterium wasabiae WPP163 8529256 YP_003258310.1 CDS Pecwa_0884 NC_013421.1 938422 938619 R KEGG: dze:Dd1591_4092 hypothetical protein; hypothetical protein complement(938422..938619) Pectobacterium wasabiae WPP163 8529257 YP_003258311.1 CDS Pecwa_0885 NC_013421.1 938689 939759 R PFAM: protein of unknown function DUF1176; KEGG: eca:ECA0780 hypothetical protein; hypothetical protein complement(938689..939759) Pectobacterium wasabiae WPP163 8529258 YP_003258312.1 CDS Pecwa_0886 NC_013421.1 940127 941059 D acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase 940127..941059 Pectobacterium wasabiae WPP163 8529259 YP_003258313.1 CDS Pecwa_0888 NC_013421.1 941966 943333 D PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: eca:ECA0783 permease; xanthine/uracil/vitamin C permease 941966..943333 Pectobacterium wasabiae WPP163 8529261 YP_003258314.1 CDS Pecwa_0889 NC_013421.1 943615 945261 D TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: eca:ECA0784 sodium/hydrogen antiporter; Na+/H+ antiporter 943615..945261 Pectobacterium wasabiae WPP163 8529262 YP_003258315.1 CDS Pecwa_0890 NC_013421.1 945632 946360 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pct:PC1_0662 transcriptional regulator; two component transcriptional regulator, winged helix family 945632..946360 Pectobacterium wasabiae WPP163 8529263 YP_003258316.1 CDS Pecwa_0891 NC_013421.1 946338 947837 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eca:ECA0786 two component system sensor kinase; integral membrane sensor signal transduction histidine kinase 946338..947837 Pectobacterium wasabiae WPP163 8529264 YP_003258317.1 CDS Pecwa_0892 NC_013421.1 948162 948386 D PFAM: Flp/Fap pilin component; KEGG: pct:PC1_0664 Flp/Fap pilin component; Flp/Fap pilin component 948162..948386 Pectobacterium wasabiae WPP163 8529265 YP_003258318.1 CDS Pecwa_0893 NC_013421.1 948397 948948 D PFAM: peptidase A24A prepilin type IV; KEGG: pct:PC1_0665 peptidase A24A prepilin type IV; peptidase A24A prepilin type IV 948397..948948 Pectobacterium wasabiae WPP163 8529266 YP_003258319.1 CDS Pecwa_0894 NC_013421.1 948995 949933 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: eca:ECA0788 hypothetical protein; Flp pilus assembly protein CpaB 948995..949933 Pectobacterium wasabiae WPP163 8529267 YP_003258320.1 CDS Pecwa_0895 NC_013421.1 950014 951441 D PFAM: type II and III secretion system protein; KEGG: eca:ECA0789 hypothetical protein; type II and III secretion system protein 950014..951441 Pectobacterium wasabiae WPP163 8529268 YP_003258321.1 CDS Pecwa_0896 NC_013421.1 951463 952149 D TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: pilus biogenesis CpaD-related; KEGG: eca:ECA0790 lipoprotein; pilus biogenesis lipoprotein CpaD 951463..952149 Pectobacterium wasabiae WPP163 8529269 YP_003258322.1 CDS Pecwa_0897 NC_013421.1 952164 953363 D KEGG: eca:ECA0791 hypothetical protein; response regulator receiver protein 952164..953363 Pectobacterium wasabiae WPP163 8529270 YP_003258323.1 CDS Pecwa_0898 NC_013421.1 953445 954848 D PFAM: type II secretion system protein E; KEGG: eca:ECA0792 type IV pilus protein; type II secretion system protein E 953445..954848 Pectobacterium wasabiae WPP163 8529271 YP_003258324.1 CDS Pecwa_0899 NC_013421.1 954867 955847 D PFAM: type II secretion system F domain; KEGG: pct:PC1_0671 type II secretion system protein; type II secretion system F domain protein 954867..955847 Pectobacterium wasabiae WPP163 8529272 YP_003258325.1 CDS Pecwa_0900 NC_013421.1 955862 956821 D PFAM: type II secretion system F domain; KEGG: eca:ECA0794 type IV pilus protein; type II secretion system F domain protein 955862..956821 Pectobacterium wasabiae WPP163 8529273 YP_003258326.1 CDS Pecwa_0901 NC_013421.1 956927 957778 D PFAM: hypothetical protein; TPR repeat-containing protein; hypothetical protein; SMART: Tetratricopeptide repeat; KEGG: pct:PC1_0673 tetratricopeptide TPR_2 repeat protein; hypothetical protein 956927..957778 Pectobacterium wasabiae WPP163 8529274 YP_003258327.1 CDS Pecwa_0902 NC_013421.1 957778 958350 D KEGG: pct:PC1_0674 hypothetical protein; hypothetical protein 957778..958350 Pectobacterium wasabiae WPP163 8529275 YP_003258328.1 CDS Pecwa_0903 NC_013421.1 958343 958981 D KEGG: eca:ECA0797 hypothetical protein; hypothetical protein 958343..958981 Pectobacterium wasabiae WPP163 8529276 YP_003258329.1 CDS Pecwa_0904 NC_013421.1 959091 960710 D KEGG: pct:PC1_0676 hypothetical protein; hypothetical protein 959091..960710 Pectobacterium wasabiae WPP163 8529277 YP_003258330.1 CDS Pecwa_0905 NC_013421.1 960769 970461 D PFAM: Ig family protein; Two component regulator propeller; SMART: Dystroglycan-type cadherin domain protein; WD-40 repeat protein; KEGG: pct:PC1_0677 Ig family protein; Ig family protein 960769..970461 Pectobacterium wasabiae WPP163 8529278 YP_003258331.1 CDS Pecwa_0906 NC_013421.1 970592 972394 D KEGG: pct:PC1_0678 hypothetical protein; hypothetical protein 970592..972394 Pectobacterium wasabiae WPP163 8529279 YP_003258332.1 CDS Pecwa_0907 NC_013421.1 972394 973152 D KEGG: pct:PC1_0679 hypothetical protein; hypothetical protein 972394..973152 Pectobacterium wasabiae WPP163 8529280 YP_003258333.1 CDS Pecwa_0908 NC_013421.1 973149 974504 D KEGG: eca:ECA0802 hypothetical protein; hypothetical protein 973149..974504 Pectobacterium wasabiae WPP163 8529281 YP_003258334.1 CDS Pecwa_0909 NC_013421.1 974507 976636 D KEGG: pct:PC1_0681 hypothetical protein; hypothetical protein 974507..976636 Pectobacterium wasabiae WPP163 8529282 YP_003258335.1 CDS Pecwa_0910 NC_013421.1 976965 978680 D PFAM: Rhamnogalacturonate lyase; KEGG: eca:ECA0804 rhamnogalacturonate lyase; Rhamnogalacturonate lyase 976965..978680 Pectobacterium wasabiae WPP163 8529283 YP_003258336.1 CDS Pecwa_0911 NC_013421.1 978735 979631 R PFAM: transposase YhgA family protein; KEGG: eca:ECA0805 hypothetical protein; transposase YhgA family protein complement(978735..979631) Pectobacterium wasabiae WPP163 8529284 YP_003258337.1 CDS actP NC_013421.1 980107 981765 R member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease complement(980107..981765) Pectobacterium wasabiae WPP163 8529285 YP_003258338.1 CDS Pecwa_0913 NC_013421.1 981762 982073 R PFAM: protein of unknown function DUF485; KEGG: eca:ECA0807 hypothetical protein; hypothetical protein complement(981762..982073) Pectobacterium wasabiae WPP163 8529286 YP_003258339.1 CDS Pecwa_0914 NC_013421.1 982198 984159 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(982198..984159) Pectobacterium wasabiae WPP163 8529287 YP_003258340.1 CDS Pecwa_0915 NC_013421.1 985060 985452 D KEGG: eca:ECA0809 global regulatory protein; global regulatory protein 985060..985452 Pectobacterium wasabiae WPP163 8529288 YP_003258341.1 CDS Pecwa_0916 NC_013421.1 986171 988081 R PFAM: hypothetical protein; M trans-acting positive regulator; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PRD domain protein; KEGG: ent:Ent638_0433 transcriptional antiterminator, BglG; PTS modulated transcriptional regulator MtlR family complement(986171..988081) Pectobacterium wasabiae WPP163 8529289 YP_003258342.1 CDS Pecwa_0917 NC_013421.1 988118 988855 R PFAM: protein of unknown function DUF1341; KEGG: cko:CKO_03584 hypothetical protein; hypothetical protein complement(988118..988855) Pectobacterium wasabiae WPP163 8529290 YP_003258343.1 CDS Pecwa_0918 NC_013421.1 988852 989970 R TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: pyridoxal phosphate-dependent transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ent:Ent638_0430 pyridoxal phosphate-dependent enzyme; pyridoxal phosphate-dependent enzyme complement(988852..989970) Pectobacterium wasabiae WPP163 8529291 YP_003258344.1 CDS Pecwa_0919 NC_013421.1 989954 991087 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(989954..991087) Pectobacterium wasabiae WPP163 8529292 YP_003258345.1 CDS Pecwa_0920 NC_013421.1 991130 991771 R KEGG: ent:Ent638_0428 inner membrane protein; inner membrane protein complement(991130..991771) Pectobacterium wasabiae WPP163 8529293 YP_003258346.1 CDS Pecwa_0921 NC_013421.1 991781 992557 R KEGG: cko:CKO_03588 hypothetical protein; hypothetical protein complement(991781..992557) Pectobacterium wasabiae WPP163 8529294 YP_003258347.1 CDS Pecwa_0922 NC_013421.1 992624 992920 R KEGG: esa:ESA_00249 hypothetical protein; hypothetical protein complement(992624..992920) Pectobacterium wasabiae WPP163 8529295 YP_003258348.1 CDS Pecwa_0923 NC_013421.1 992923 993285 R KEGG: cko:CKO_03590 hypothetical protein; hypothetical protein complement(992923..993285) Pectobacterium wasabiae WPP163 8529296 YP_003258349.1 CDS Pecwa_0924 NC_013421.1 993296 993616 R PFAM: PRD domain protein; KEGG: cko:CKO_03591 hypothetical protein; PRD domain-containing protein complement(993296..993616) Pectobacterium wasabiae WPP163 8529297 YP_003258350.1 CDS Pecwa_0925 NC_013421.1 994264 995274 D KEGG: eca:ECA0815 hypothetical protein; hypothetical protein 994264..995274 Pectobacterium wasabiae WPP163 8529298 YP_003258351.1 CDS Pecwa_0926 NC_013421.1 995455 996981 R KEGG: pct:PC1_0691 oligogalacturonide transporter; oligogalacturonide transporter complement(995455..996981) Pectobacterium wasabiae WPP163 8529299 YP_003258352.1 CDS Pecwa_0927 NC_013421.1 997365 997739 D KEGG: pct:PC1_0692 hypothetical protein; hypothetical protein 997365..997739 Pectobacterium wasabiae WPP163 8529300 YP_003258353.1 CDS Pecwa_0928 NC_013421.1 997732 999219 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: pct:PC1_0693 mannitol dehydrogenase domain protein; mannitol dehydrogenase complement(997732..999219) Pectobacterium wasabiae WPP163 8529301 YP_003258354.1 CDS Pecwa_0929 NC_013421.1 999541 1000821 D KEGG: pct:PC1_0694 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 999541..1000821 Pectobacterium wasabiae WPP163 8529302 YP_003258355.1 CDS Pecwa_0930 NC_013421.1 1000883 1001956 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pct:PC1_0695 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(1000883..1001956) Pectobacterium wasabiae WPP163 8529303 YP_003258356.1 CDS Pecwa_0931 NC_013421.1 1002132 1002929 R PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eca:ECA0822 carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1002132..1002929) Pectobacterium wasabiae WPP163 8529304 YP_003258357.1 CDS Pecwa_0932 NC_013421.1 1002951 1003487 R PFAM: cytochrome B561; KEGG: eca:ECA0823 cytochrome b561; cytochrome B561 complement(1002951..1003487) Pectobacterium wasabiae WPP163 8529305 YP_003258358.1 CDS Pecwa_0933 NC_013421.1 1003788 1007321 R TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate-flavodoxin oxidoreductase, EKR domain; KEGG: pct:PC1_0698 pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase complement(1003788..1007321) Pectobacterium wasabiae WPP163 8529306 YP_003258359.1 CDS Pecwa_0934 NC_013421.1 1007714 1008142 D KEGG: eca:ECA0825 hypothetical protein; hypothetical protein 1007714..1008142 Pectobacterium wasabiae WPP163 8529307 YP_003258360.1 CDS Pecwa_0935 NC_013421.1 1008222 1009790 R PFAM: glycoside hydrolase family 43; KEGG: pct:PC1_0700 glycoside hydrolase family 43; glycoside hydrolase family protein complement(1008222..1009790) Pectobacterium wasabiae WPP163 8529308 YP_003258361.1 CDS Pecwa_0936 NC_013421.1 1009844 1011280 R TIGRFAM: sugar (glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0701 sugar (glycoside-pentoside-hexuronide) transporter; sugar (glycoside-Pentoside-Hexuronide) transporter complement(1009844..1011280) Pectobacterium wasabiae WPP163 8529309 YP_003258362.1 CDS Pecwa_0937 NC_013421.1 1011800 1012282 D PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_0703 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1011800..1012282 Pectobacterium wasabiae WPP163 8529310 YP_003258363.1 CDS Pecwa_0938 NC_013421.1 1012327 1012953 R PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA0827 amino acid efflux protein; lysine exporter protein LysE/YggA complement(1012327..1012953) Pectobacterium wasabiae WPP163 8529311 YP_003258364.1 CDS Pecwa_0939 NC_013421.1 1013181 1013423 R hypothetical protein complement(1013181..1013423) Pectobacterium wasabiae WPP163 8529312 YP_003258365.1 CDS Pecwa_0940 NC_013421.1 1013498 1013827 D PFAM: protein of unknown function DUF1493; KEGG: sec:SC2504 cytoplasmic protein; hypothetical protein 1013498..1013827 Pectobacterium wasabiae WPP163 8529313 YP_003258366.1 CDS Pecwa_0941 NC_013421.1 1014040 1014531 D KEGG: pct:PC1_3264 hypothetical protein; hypothetical protein 1014040..1014531 Pectobacterium wasabiae WPP163 8529314 YP_003258367.1 CDS Pecwa_0942 NC_013421.1 1014524 1015108 D PFAM: filamentation induced by cAMP protein Fic; KEGG: eca:ECA3452 cell filamentation protein; filamentation induced by cAMP protein fic 1014524..1015108 Pectobacterium wasabiae WPP163 8529315 YP_003258368.1 CDS Pecwa_0943 NC_013421.1 1015689 1015973 R PFAM: plasmid stabilization system; KEGG: eca:ECA2758 hypothetical protein; plasmid stabilization system complement(1015689..1015973) Pectobacterium wasabiae WPP163 8529316 YP_003258369.1 CDS Pecwa_0944 NC_013421.1 1015963 1016208 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: dze:Dd1591_2452 transcriptional regulator, CopG family; CopG family transcriptional regulator complement(1015963..1016208) Pectobacterium wasabiae WPP163 8529317 YP_003258370.1 CDS Pecwa_0945 NC_013421.1 1016276 1016428 R KEGG: cko:CKO_00978 hypothetical protein; hypothetical protein complement(1016276..1016428) Pectobacterium wasabiae WPP163 8529318 YP_003258371.1 CDS Pecwa_0946 NC_013421.1 1016444 1017655 R PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_00976 hypothetical protein; major facilitator superfamily protein complement(1016444..1017655) Pectobacterium wasabiae WPP163 8529319 YP_003258372.1 CDS Pecwa_0947 NC_013421.1 1017788 1019512 D PFAM: IucA/IucC family protein; KEGG: ses:SARI_02152 hypothetical protein; IucA/IucC family protein 1017788..1019512 Pectobacterium wasabiae WPP163 8529320 YP_003258373.1 CDS Pecwa_0948 NC_013421.1 1019513 1020460 D PFAM: Siderophore biosynthesis protein, conserved region; KEGG: cko:CKO_00972 hypothetical protein; siderophore biosynthesis protein 1019513..1020460 Pectobacterium wasabiae WPP163 8529321 YP_003258374.1 CDS Pecwa_0949 NC_013421.1 1020460 1022193 D PFAM: IucA/IucC family protein; KEGG: cko:CKO_00971 hypothetical protein; IucA/IucC family protein 1020460..1022193 Pectobacterium wasabiae WPP163 8529322 YP_003258375.1 CDS Pecwa_0950 NC_013421.1 1022197 1023531 D KEGG: cko:CKO_00970 hypothetical protein; L-lysine 6-monooxygenase 1022197..1023531 Pectobacterium wasabiae WPP163 8529323 YP_003258376.1 CDS Pecwa_0951 NC_013421.1 1023560 1025758 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cko:CKO_00969 hypothetical protein; TonB-dependent siderophore receptor 1023560..1025758 Pectobacterium wasabiae WPP163 8529324 YP_003258377.1 CDS Pecwa_0952 NC_013421.1 1026352 1026897 D KEGG: pmr:PMI2492 hypothetical protein; hypothetical protein 1026352..1026897 Pectobacterium wasabiae WPP163 8529325 YP_003258378.1 CDS Pecwa_0953 NC_013421.1 1026881 1027798 D PFAM: Domain of unknown function DUF1814; KEGG: plu:plu0453 hypothetical protein; hypothetical protein 1026881..1027798 Pectobacterium wasabiae WPP163 8529326 YP_003258379.1 CDS Pecwa_0955 NC_013421.1 1028255 1028506 R PFAM: protein of unknown function DUF172; KEGG: pct:PC1_0709 hypothetical protein; hypothetical protein complement(1028255..1028506) Pectobacterium wasabiae WPP163 8529328 YP_003258380.1 CDS Pecwa_0956 NC_013421.1 1028877 1029428 R KEGG: bmj:BMULJ_02360 predicted ATPase; ATPase complement(1028877..1029428) Pectobacterium wasabiae WPP163 8529329 YP_003258381.1 CDS Pecwa_0957 NC_013421.1 1029757 1031115 R KEGG: rfr:Rfer_1068 hypothetical protein; hypothetical protein complement(1029757..1031115) Pectobacterium wasabiae WPP163 8529330 YP_003258382.1 CDS Pecwa_0958 NC_013421.1 1031144 1032355 R PFAM: integrase; KEGG: pct:PC1_0723 integrase; integrase complement(1031144..1032355) Pectobacterium wasabiae WPP163 8529331 YP_003258383.1 CDS smpB NC_013421.1 1032977 1033459 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(1032977..1033459) Pectobacterium wasabiae WPP163 8529333 YP_003258384.1 CDS Pecwa_0960 NC_013421.1 1033615 1034061 D PFAM: cyclase/dehydrase; polyketide cyclase/dehydrase; KEGG: pct:PC1_0725 cyclase/dehydrase; hypothetical protein 1033615..1034061 Pectobacterium wasabiae WPP163 8529334 YP_003258385.1 CDS Pecwa_0961 NC_013421.1 1034042 1034332 D PFAM: protein of unknown function UPF0125; KEGG: eca:ECA0838 hypothetical protein; hypothetical protein 1034042..1034332 Pectobacterium wasabiae WPP163 8529335 YP_003258386.1 CDS Pecwa_0962 NC_013421.1 1034468 1034803 R PFAM: SmpA/OmlA domain protein; KEGG: pct:PC1_0727 SmpA/OmlA domain protein; hypothetical protein complement(1034468..1034803) Pectobacterium wasabiae WPP163 8529336 YP_003258387.1 CDS Pecwa_0963 NC_013421.1 1034957 1036618 R TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: pct:PC1_0728 DNA repair protein RecN; recombination and repair protein complement(1034957..1036618) Pectobacterium wasabiae WPP163 8529337 YP_003258388.1 CDS ppnK NC_013421.1 1036698 1037594 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(1036698..1037594) Pectobacterium wasabiae WPP163 8529338 YP_003258389.1 CDS Pecwa_0965 NC_013421.1 1037725 1038312 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1037725..1038312 Pectobacterium wasabiae WPP163 8529339 YP_003258390.1 CDS Pecwa_0966 NC_013421.1 1038569 1039807 D TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: pct:PC1_0731 Mn2+/Fe2+ transporter NRAMP family; manganese transporter MntH 1038569..1039807 Pectobacterium wasabiae WPP163 8529340 YP_003258391.1 CDS Pecwa_0967 NC_013421.1 1039846 1040010 R hypothetical protein complement(1039846..1040010) Pectobacterium wasabiae WPP163 8529341 YP_003258392.1 CDS Pecwa_0968 NC_013421.1 1040123 1040425 R KEGG: bra:BRADO6232 hypothetical protein; hypothetical protein complement(1040123..1040425) Pectobacterium wasabiae WPP163 8529342 YP_003258393.1 CDS Pecwa_0969 NC_013421.1 1040447 1041112 R KEGG: sde:Sde_2336 hypothetical protein; hypothetical protein complement(1040447..1041112) Pectobacterium wasabiae WPP163 8529343 YP_003258394.1 CDS Pecwa_0970 NC_013421.1 1041244 1041474 R TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: pct:PC1_0732 4-oxalocrotonate tautomerase family enzyme; 4-oxalocrotonate tautomerase complement(1041244..1041474) Pectobacterium wasabiae WPP163 8529344 YP_003258395.1 CDS Pecwa_0971 NC_013421.1 1041655 1042236 D PFAM: NUDIX hydrolase; KEGG: pct:PC1_0735 NUDIX hydrolase; NUDIX hydrolase 1041655..1042236 Pectobacterium wasabiae WPP163 8529345 YP_003258396.1 CDS Pecwa_0972 NC_013421.1 1042630 1043895 D PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_0736 extracellular solute-binding protein family 1; extracellular solute-binding protein 1042630..1043895 Pectobacterium wasabiae WPP163 8529346 YP_003258397.1 CDS Pecwa_0973 NC_013421.1 1043959 1044840 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_0737 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 1043959..1044840 Pectobacterium wasabiae WPP163 8529347 YP_003258398.1 CDS Pecwa_0974 NC_013421.1 1044842 1045654 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_0738 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 1044842..1045654 Pectobacterium wasabiae WPP163 8529348 YP_003258399.1 CDS Pecwa_0975 NC_013421.1 1045691 1046776 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_0739 ABC transporter; ABC transporter 1045691..1046776 Pectobacterium wasabiae WPP163 8529349 YP_003258400.1 CDS Pecwa_0976 NC_013421.1 1046997 1048520 D PFAM: glycosyl hydrolase 53 domain protein; ricin B lectin; KEGG: pct:PC1_0740 arabinogalactan endo-1,4-beta-galactosidase; arabinogalactan endo-1,4-beta-galactosidase 1046997..1048520 Pectobacterium wasabiae WPP163 8529350 YP_003258401.1 CDS Pecwa_0977 NC_013421.1 1048596 1049627 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pct:PC1_0741 LacI family transcriptional regulator; LacI family transcriptional regulator complement(1048596..1049627) Pectobacterium wasabiae WPP163 8529351 YP_003258402.1 CDS Pecwa_0978 NC_013421.1 1049864 1050805 R PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: pct:PC1_0742 transcriptional antiterminator, BglG; transcriptional antiterminator BglG complement(1049864..1050805) Pectobacterium wasabiae WPP163 8529352 YP_003258403.1 CDS Pecwa_0979 NC_013421.1 1050862 1052289 R PFAM: glycoside hydrolase family 1; KEGG: eca:ECA0859 beta-glucosidase; beta-glucosidase complement(1050862..1052289) Pectobacterium wasabiae WPP163 8529353 YP_003258404.1 CDS Pecwa_0980 NC_013421.1 1052355 1054274 R TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: eca:ECA0860 PTS system, IIABC component; PTS system beta-glucoside-specific transporter subunit IIABC complement(1052355..1054274) Pectobacterium wasabiae WPP163 8529354 YP_003258405.1 CDS Pecwa_0981 NC_013421.1 1054576 1056570 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(1054576..1056570) Pectobacterium wasabiae WPP163 8529355 YP_003258406.1 CDS Pecwa_0982 NC_013421.1 1056586 1057536 R KEGG: eca:ECA0862 transaldolase A; TIGRFAM: transaldolase; PFAM: transaldolase; transaldolase A complement(1056586..1057536) Pectobacterium wasabiae WPP163 8529356 YP_003258407.1 CDS Pecwa_0983 NC_013421.1 1057720 1058178 R catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B complement(1057720..1058178) Pectobacterium wasabiae WPP163 8529357 YP_003258408.1 CDS Pecwa_0984 NC_013421.1 1058257 1058625 R PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: pct:PC1_0748 PTS system glucitol/sorbitol-specific IIA component; PTS system glucitol/sorbitol-specific transporter subunit IIA complement(1058257..1058625) Pectobacterium wasabiae WPP163 8529358 YP_003258409.1 CDS Pecwa_0985 NC_013421.1 1058636 1059661 R transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease complement(1058636..1059661) Pectobacterium wasabiae WPP163 8529359 YP_003258410.1 CDS Pecwa_0986 NC_013421.1 1059766 1061484 R PFAM: Sorbitol phosphotransferase protein II domain protein; type III effector Hrp-dependent outers; KEGG: pct:PC1_0750 protein-N(pi)-phosphohistidine--sugar phosphotransferase; protein-N(pi)-phosphohistidine--sugar phosphotransferase complement(1059766..1061484) Pectobacterium wasabiae WPP163 8529360 YP_003258411.1 CDS pdxA NC_013421.1 1061518 1062522 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(1061518..1062522) Pectobacterium wasabiae WPP163 8529361 YP_003258412.1 CDS Pecwa_0988 NC_013421.1 1062768 1063592 D TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: pct:PC1_0752 triosephosphate isomerase; triosephosphate isomerase 1062768..1063592 Pectobacterium wasabiae WPP163 8529362 YP_003258413.1 CDS Pecwa_0989 NC_013421.1 1063596 1064561 D PFAM: sugar-binding domain protein; KEGG: pct:PC1_0753 DeoR family transcriptional regulator; DeoR family transcriptional regulator 1063596..1064561 Pectobacterium wasabiae WPP163 8529363 YP_003258414.1 CDS Pecwa_0990 NC_013421.1 1064781 1067060 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 1064781..1067060 Pectobacterium wasabiae WPP163 8529364 YP_003258415.1 CDS Pecwa_0991 NC_013421.1 1067500 1068774 D tryptophan transporter of high affinity; tryptophan permease 1067500..1068774 Pectobacterium wasabiae WPP163 8529365 YP_003258416.1 CDS Pecwa_0992 NC_013421.1 1068883 1069335 R PFAM: protein of unknown function DUF188; KEGG: eca:ECA0873 hypothetical protein; hypothetical protein complement(1068883..1069335) Pectobacterium wasabiae WPP163 8529366 YP_003258417.1 CDS Pecwa_0993 NC_013421.1 1069339 1070271 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(1069339..1070271) Pectobacterium wasabiae WPP163 8529367 YP_003258418.1 CDS Pecwa_0994 NC_013421.1 1070441 1070878 D PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_0758 GCN5-related N-acetyltransferase; acetyltransferase 1070441..1070878 Pectobacterium wasabiae WPP163 8529368 YP_003258419.1 CDS Pecwa_0995 NC_013421.1 1071018 1071539 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mei:Msip34_0417 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 1071018..1071539 Pectobacterium wasabiae WPP163 8529369 YP_003258420.1 CDS Pecwa_0996 NC_013421.1 1071529 1072476 D PFAM: FecR protein; KEGG: mei:Msip34_0416 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 1071529..1072476 Pectobacterium wasabiae WPP163 8529370 YP_003258421.1 CDS Pecwa_0997 NC_013421.1 1072596 1075403 D PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: eca:ECA0878 hypothetical protein; TonB-dependent receptor plug 1072596..1075403 Pectobacterium wasabiae WPP163 8529371 YP_003258422.1 CDS Pecwa_0998 NC_013421.1 1075429 1078206 D PFAM: peptidase M16 domain protein; KEGG: eca:ECA0879 zinc protease; peptidase M16 domain-containing protein 1075429..1078206 Pectobacterium wasabiae WPP163 8529372 YP_003258423.1 CDS Pecwa_0999 NC_013421.1 1078203 1079876 D PFAM: ABC transporter; ABC transporter related; SbmABacA family protein; SMART: ATPase AAA; KEGG: pct:PC1_0762 ABC transporter; ABC transporter 1078203..1079876 Pectobacterium wasabiae WPP163 8529373 YP_003258424.1 CDS Pecwa_1000 NC_013421.1 1080064 1080681 D PFAM: protein of unknown function DUF1131; KEGG: pct:PC1_0763 hypothetical protein; hypothetical protein 1080064..1080681 Pectobacterium wasabiae WPP163 8529374 YP_003258425.1 CDS Pecwa_1001 NC_013421.1 1080852 1081751 D TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: eca:ECA0882 hypothetical protein; dyp-type peroxidase family protein 1080852..1081751 Pectobacterium wasabiae WPP163 8529375 YP_003258426.1 CDS Pecwa_1002 NC_013421.1 1082056 1083084 D TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_0765 sulfate ABC transporter periplasmic sulfate-binding protein; thiosulfate transporter subunit 1082056..1083084 Pectobacterium wasabiae WPP163 8529376 YP_003258427.1 CDS Pecwa_1003 NC_013421.1 1083084 1083917 D TIGRFAM: sulfate ABC transporter inner membrane protein CysT; sulfate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_0766 sulfate ABC transporter inner membrane protein CysT; sulfate/thiosulfate transporter subunit 1083084..1083917 Pectobacterium wasabiae WPP163 8529377 YP_003258428.1 CDS cysW NC_013421.1 1083917 1084783 D Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; sulfate/thiosulfate transporter permease subunit 1083917..1084783 Pectobacterium wasabiae WPP163 8529378 YP_003258429.1 CDS cysM NC_013421.1 1084833 1085717 D catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 1084833..1085717 Pectobacterium wasabiae WPP163 8529379 YP_003258430.1 CDS Pecwa_1006 NC_013421.1 1085718 1087667 R PFAM: ABC transporter; protein of unknown function DUF214; SMART: ATPase AAA; KEGG: pct:PC1_0769 ABC transporter; ABC transporter complement(1085718..1087667) Pectobacterium wasabiae WPP163 8529380 YP_003258431.1 CDS Pecwa_1007 NC_013421.1 1087671 1088867 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; hypothetical protein family protein; KEGG: eca:ECA0888 macrolide-specific efflux protein maca precursor; RND family efflux transporter MFP subunit complement(1087671..1088867) Pectobacterium wasabiae WPP163 8529381 YP_003258432.1 CDS Pecwa_1008 NC_013421.1 1089113 1089793 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pct:PC1_0771 transcriptional regulator; two component transcriptional regulator, winged helix family 1089113..1089793 Pectobacterium wasabiae WPP163 8529382 YP_003258433.1 CDS Pecwa_1009 NC_013421.1 1089793 1091160 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA0890 two-component system sensor kinase; integral membrane sensor signal transduction histidine kinase 1089793..1091160 Pectobacterium wasabiae WPP163 8529383 YP_003258434.1 CDS Pecwa_1010 NC_013421.1 1091227 1091736 R functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter complement(1091227..1091736) Pectobacterium wasabiae WPP163 8529384 YP_003258435.1 CDS Pecwa_1011 NC_013421.1 1091887 1093614 R phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transporter; phosphoenolpyruvate-protein phosphotransferase complement(1091887..1093614) Pectobacterium wasabiae WPP163 8529385 YP_003258436.1 CDS Pecwa_1012 NC_013421.1 1093661 1093918 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: pct:PC1_0775 phosphotransferase system, phosphocarrier protein HPr; PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr complement(1093661..1093918) Pectobacterium wasabiae WPP163 8529386 YP_003258437.1 CDS Pecwa_1013 NC_013421.1 1094351 1095319 R CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A complement(1094351..1095319) Pectobacterium wasabiae WPP163 8529387 YP_003258438.1 CDS Pecwa_1014 NC_013421.1 1095483 1096274 R role in sulfur assimilation; sulfate transporter CysZ complement(1095483..1096274) Pectobacterium wasabiae WPP163 8529388 YP_003258439.1 CDS Pecwa_1015 NC_013421.1 1096499 1097521 D interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 1096499..1097521 Pectobacterium wasabiae WPP163 8529389 YP_003258440.1 CDS Pecwa_1016 NC_013421.1 1097672 1098925 D uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH 1097672..1098925 Pectobacterium wasabiae WPP163 8529390 YP_003258441.1 CDS Pecwa_1017 NC_013421.1 1099026 1099307 R PFAM: protein of unknown function DUF526; KEGG: pct:PC1_0780 hypothetical protein; hypothetical protein complement(1099026..1099307) Pectobacterium wasabiae WPP163 8529391 YP_003258442.1 CDS ribB NC_013421.1 1099821 1100474 D DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1099821..1100474 Pectobacterium wasabiae WPP163 8529392 YP_003258443.1 CDS Pecwa_1019 NC_013421.1 1100558 1101418 R with TehA confers resistance to tellurite; tellurite resistance protein TehB complement(1100558..1101418) Pectobacterium wasabiae WPP163 8529393 YP_003258444.1 CDS Pecwa_1020 NC_013421.1 1101524 1102672 R catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase complement(1101524..1102672) Pectobacterium wasabiae WPP163 8529394 YP_003258445.1 CDS Pecwa_1021 NC_013421.1 1102683 1104200 R detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin complement(1102683..1104200) Pectobacterium wasabiae WPP163 8529395 YP_003258446.1 CDS Pecwa_1022 NC_013421.1 1104368 1105903 D Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 1104368..1105903 Pectobacterium wasabiae WPP163 8529396 YP_003258447.1 CDS Pecwa_1023 NC_013421.1 1105954 1107597 R TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: pct:PC1_0786 hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit beta complement(1105954..1107597) Pectobacterium wasabiae WPP163 8529397 YP_003258448.1 CDS Pecwa_1024 NC_013421.1 1108208 1109086 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0905 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1108208..1109086) Pectobacterium wasabiae WPP163 8529398 YP_003258449.1 CDS Pecwa_1025 NC_013421.1 1109359 1109829 D PFAM: transmembrane pair domain protein; KEGG: pct:PC1_0789 transmembrane pair domain protein; transmembrane pair domain-containing protein 1109359..1109829 Pectobacterium wasabiae WPP163 8529399 YP_003258450.1 CDS Pecwa_1026 NC_013421.1 1109839 1110501 R KEGG: eca:ECA0907 DNA-3-methyladenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; DNA-3-methyladenine glycosylase II complement(1109839..1110501) Pectobacterium wasabiae WPP163 8529400 YP_003258451.1 CDS Pecwa_1027 NC_013421.1 1110725 1111804 D KEGG: eca:ECA0908 ADA regulatory protein (methylated-DNA--protein-cysteine methyltransferase); TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain protein; methylguanine DNA methyltransferase ribonuclease domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1110725..1111804 Pectobacterium wasabiae WPP163 8529401 YP_003258452.1 CDS Pecwa_1028 NC_013421.1 1111836 1112492 D PFAM: 2OG-Fe(II) oxygenase; KEGG: pct:PC1_0794 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 1111836..1112492 Pectobacterium wasabiae WPP163 8529402 YP_003258453.1 CDS Pecwa_1029 NC_013421.1 1112573 1114102 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: eca:ECA0910 flavoprotein subunit of a reductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(1112573..1114102) Pectobacterium wasabiae WPP163 8529403 YP_003258454.1 CDS Pecwa_1030 NC_013421.1 1114144 1114548 R PFAM: FMN-binding domain protein; KEGG: pct:PC1_0796 FMN-binding domain protein; FMN-binding domain-containing protein complement(1114144..1114548) Pectobacterium wasabiae WPP163 8529404 YP_003258455.1 CDS Pecwa_1031 NC_013421.1 1114557 1115933 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0912 hypothetical protein; major facilitator superfamily protein complement(1114557..1115933) Pectobacterium wasabiae WPP163 8529405 YP_003258456.1 CDS Pecwa_1032 NC_013421.1 1115934 1116896 R TIGRFAM: cytochrome C nitrite reductase, NrfD subunit; PFAM: polysulphide reductase NrfD; KEGG: eca:ECA0913 component of polysulfide reductase; cytochrome C nitrite reductase, NrfD subunit complement(1115934..1116896) Pectobacterium wasabiae WPP163 8529406 YP_003258457.1 CDS Pecwa_1033 NC_013421.1 1116889 1117587 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA0914 component of polysulfide reductase; 4Fe-4S ferredoxin complement(1116889..1117587) Pectobacterium wasabiae WPP163 8529407 YP_003258458.1 CDS Pecwa_1034 NC_013421.1 1118098 1119063 R PFAM: alpha/beta hydrolase; KEGG: pct:PC1_0800 alpha/beta hydrolase; alpha/beta hydrolase complement(1118098..1119063) Pectobacterium wasabiae WPP163 8529408 YP_003258459.1 CDS Pecwa_1035 NC_013421.1 1119340 1120239 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0916 LysR family transcriptional regulator; LysR family transcriptional regulator 1119340..1120239 Pectobacterium wasabiae WPP163 8529409 YP_003258460.1 CDS Pecwa_1036 NC_013421.1 1120411 1121625 D PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0917 starvation sensing mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 1120411..1121625 Pectobacterium wasabiae WPP163 8529410 YP_003258461.1 CDS Pecwa_1037 NC_013421.1 1121655 1122677 D PFAM: alcohol dehydrogenase GroES; alcohol dehydrogenase zinc-binding domain protein; KEGG: pct:PC1_0803 alcohol dehydrogenase GroES; dehydrogenase 1121655..1122677 Pectobacterium wasabiae WPP163 8529411 YP_003258462.1 CDS Pecwa_1038 NC_013421.1 1123012 1124385 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA0919 transporter; major facilitator superfamily protein 1123012..1124385 Pectobacterium wasabiae WPP163 8529412 YP_003258463.1 CDS Pecwa_1039 NC_013421.1 1124488 1125954 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eca:ECA0920 carbohydrate oxidoreductase; mannitol dehydrogenase 1124488..1125954 Pectobacterium wasabiae WPP163 8529413 YP_003258464.1 CDS Pecwa_1040 NC_013421.1 1126045 1126731 D PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0921 GntR family transcriptional regulator; GntR family transcriptional regulator 1126045..1126731 Pectobacterium wasabiae WPP163 8529414 YP_003258465.1 CDS Pecwa_1041 NC_013421.1 1126793 1128154 R KEGG: eca:ECA0924 hypothetical protein; hypothetical protein complement(1126793..1128154) Pectobacterium wasabiae WPP163 8529415 YP_003258466.1 CDS Pecwa_1042 NC_013421.1 1128298 1129491 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA0930 permease; major facilitator superfamily protein complement(1128298..1129491) Pectobacterium wasabiae WPP163 8529416 YP_003258467.1 CDS Pecwa_1043 NC_013421.1 1130088 1131956 R KEGG: eca:ECA0931 avirulence protein; avirulence protein complement(1130088..1131956) Pectobacterium wasabiae WPP163 8529417 YP_003258468.1 CDS Pecwa_1044 NC_013421.1 1132265 1133581 R PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: eca:ECA0932 permease; cytosine/purines uracil thiamine allantoin permease complement(1132265..1133581) Pectobacterium wasabiae WPP163 8529418 YP_003258469.1 CDS Pecwa_1045 NC_013421.1 1133596 1134285 R PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pct:PC1_0816 LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(1133596..1134285) Pectobacterium wasabiae WPP163 8529419 YP_003258470.1 CDS Pecwa_1046 NC_013421.1 1134722 1135750 R PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bbt:BBta_0488 inositol 2-dehydrogenase; oxidoreductase domain-containing protein complement(1134722..1135750) Pectobacterium wasabiae WPP163 8529420 YP_003258471.1 CDS Pecwa_1047 NC_013421.1 1135798 1136667 R PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: bja:blr2556 thiosulfate sulfurtransferase; rhodanese complement(1135798..1136667) Pectobacterium wasabiae WPP163 8529421 YP_003258472.1 CDS Pecwa_1048 NC_013421.1 1136686 1137435 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A2431 polar amino acid ABC transporter ATPase; ABC transporter complement(1136686..1137435) Pectobacterium wasabiae WPP163 8529422 YP_003258473.1 CDS Pecwa_1049 NC_013421.1 1137435 1138148 R TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pfs:PFLU2235 ABC transporter, membrane protein; polar amino acid ABC transporter inner membrane protein complement(1137435..1138148) Pectobacterium wasabiae WPP163 8529423 YP_003258474.1 CDS Pecwa_1050 NC_013421.1 1138145 1138894 R TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ppg:PputGB1_3165 polar amino acid ABC transporter inner membrane protein; polar amino acid ABC transporter inner membrane protein complement(1138145..1138894) Pectobacterium wasabiae WPP163 8529424 YP_003258475.1 CDS Pecwa_1051 NC_013421.1 1138897 1139721 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: avn:Avin_21410 ABC transporter substrate binding protein, family 3; family 3 extracellular solute-binding protein complement(1138897..1139721) Pectobacterium wasabiae WPP163 8529425 YP_003258476.1 CDS Pecwa_1052 NC_013421.1 1139926 1140711 D PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: mes:Meso_0408 IclR family transcriptional regulator; transcriptional regulator, IclR family 1139926..1140711 Pectobacterium wasabiae WPP163 8529426 YP_003258477.1 CDS Pecwa_1053 NC_013421.1 1140898 1142067 D KEGG: reu:Reut_B3581 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; cystathionine beta-lyase 1140898..1142067 Pectobacterium wasabiae WPP163 8529427 YP_003258478.1 CDS Pecwa_1054 NC_013421.1 1142124 1143452 D PFAM: capsule synthesis protein, CapA; KEGG: bph:Bphy_3228 enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein; capsule synthesis protein, CapA 1142124..1143452 Pectobacterium wasabiae WPP163 8529428 YP_003258479.1 CDS Pecwa_1055 NC_013421.1 1143767 1146010 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eca:ECA0935 ferric-rhodotorulic acid outer membrane transporter; ferric-rhodotorulic acid outer membrane transporter 1143767..1146010 Pectobacterium wasabiae WPP163 8529429 YP_003258480.1 CDS Pecwa_1056 NC_013421.1 1146276 1146767 D KEGG: pct:PC1_0821 hypothetical protein; hypothetical protein 1146276..1146767 Pectobacterium wasabiae WPP163 8529430 YP_003258481.1 CDS Pecwa_1057 NC_013421.1 1146846 1147415 R PFAM: fimbrial protein; KEGG: eca:ECA0939 fimbrial protein; fimbrial protein complement(1146846..1147415) Pectobacterium wasabiae WPP163 8529431 YP_003258482.1 CDS Pecwa_1058 NC_013421.1 1147493 1148242 R PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: pct:PC1_0824 pili assembly chaperone, N-terminal; Pili assembly chaperone, N-terminal complement(1147493..1148242) Pectobacterium wasabiae WPP163 8529432 YP_003258483.1 CDS Pecwa_1059 NC_013421.1 1148277 1148702 R KEGG: eca:ECA0942 outer membrane usher protein; hypothetical protein complement(1148277..1148702) Pectobacterium wasabiae WPP163 8529433 YP_003258484.1 CDS Pecwa_1060 NC_013421.1 1149619 1150392 D KEGG: eca:ECA0944 hypothetical protein; CadC family transcriptional regulator 1149619..1150392 Pectobacterium wasabiae WPP163 8529434 YP_003258485.1 CDS Pecwa_1061 NC_013421.1 1150379 1150849 D KEGG: pct:PC1_0828 hypothetical protein; hypothetical protein 1150379..1150849 Pectobacterium wasabiae WPP163 8529435 YP_003258486.1 CDS Pecwa_1062 NC_013421.1 1150978 1151574 D PFAM: conserved hypothetical protein; KEGG: kpn:KPN_02004 hypothetical protein; hypothetical protein 1150978..1151574 Pectobacterium wasabiae WPP163 8529436 YP_003258487.1 CDS Pecwa_1063 NC_013421.1 1151744 1152301 R KEGG: eca:ECA0948 hypothetical protein; hypothetical protein complement(1151744..1152301) Pectobacterium wasabiae WPP163 8529437 YP_003258488.1 CDS Pecwa_1064 NC_013421.1 1152534 1153298 R PFAM: protein of unknown function DUF81; KEGG: eca:ECA0949 hypothetical protein; hypothetical protein complement(1152534..1153298) Pectobacterium wasabiae WPP163 8529438 YP_003258489.1 CDS Pecwa_1066 NC_013421.1 1154424 1154930 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0954 acetyltransferase; N-acetyltransferase GCN5 complement(1154424..1154930) Pectobacterium wasabiae WPP163 8529440 YP_003258490.1 CDS Pecwa_1067 NC_013421.1 1155027 1155746 R KEGG: dda:Dd703_3431 hypothetical protein; hypothetical protein complement(1155027..1155746) Pectobacterium wasabiae WPP163 8529441 YP_003258491.1 CDS Pecwa_1070 NC_013421.1 1157817 1158320 D TIGRFAM: type VI hypothetical protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: eca:ECA3445 hypothetical protein; hypothetical protein 1157817..1158320 Pectobacterium wasabiae WPP163 8529444 YP_003258492.1 CDS Pecwa_1071 NC_013421.1 1158353 1159831 D TIGRFAM: type VI hypothetical protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: eca:ECA3444 hypothetical protein; hypothetical protein 1158353..1159831 Pectobacterium wasabiae WPP163 8529445 YP_003258493.1 CDS Pecwa_1072 NC_013421.1 1159837 1160268 D TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: eca:ECA3443 hypothetical protein; type VI secretion system lysozyme-like protein 1159837..1160268 Pectobacterium wasabiae WPP163 8529446 YP_003258494.1 CDS Pecwa_1073 NC_013421.1 1160271 1162037 D TIGRFAM: type VI hypothetical protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: pct:PC1_3252 type VI hypothetical protein, VC_A0110 family; hypothetical protein 1160271..1162037 Pectobacterium wasabiae WPP163 8529447 YP_003258495.1 CDS Pecwa_1074 NC_013421.1 1162001 1162999 D TIGRFAM: type VI hypothetical protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: eca:ECA3441 hypothetical protein; hypothetical protein 1162001..1162999 Pectobacterium wasabiae WPP163 8529448 YP_003258496.1 CDS Pecwa_1075 NC_013421.1 1163002 1164222 D TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: pct:PC1_3250 FHA domain containing protein; FHA domain-containing protein 1163002..1164222 Pectobacterium wasabiae WPP163 8529449 YP_003258497.1 CDS Pecwa_1076 NC_013421.1 1164219 1164743 D TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: pct:PC1_3249 type VI secretion lipoprotein, VC_A0113 family; type VI secretion lipoprotein 1164219..1164743 Pectobacterium wasabiae WPP163 8529450 YP_003258498.1 CDS Pecwa_1077 NC_013421.1 1164746 1166083 D TIGRFAM: type VI hypothetical protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: eca:ECA3438 hypothetical protein; hypothetical protein 1164746..1166083 Pectobacterium wasabiae WPP163 8529451 YP_003258499.1 CDS Pecwa_1078 NC_013421.1 1166099 1166875 D TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: type IV / VI secretion system, DotU; KEGG: pct:PC1_3247 type IV / VI secretion system protein, DotU family; DotU family type IV / VI secretion system protein 1166099..1166875 Pectobacterium wasabiae WPP163 8529452 YP_003258500.1 CDS Pecwa_1079 NC_013421.1 1166889 1169486 D KEGG: pct:PC1_3246 type VI secretion ATPase, ClpV1 family; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Clp ATPase-like; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; type VI secretion ATPase, ClpV1 family 1166889..1169486 Pectobacterium wasabiae WPP163 8529453 YP_003258501.1 CDS Pecwa_1080 NC_013421.1 1169489 1171027 D PFAM: sigma-54 factor interaction domain-containing protein; SMART: ATPase AAA; KEGG: pct:PC1_3245 sigma 54 interacting domain protein; sigma-54 interacting domain-containing protein 1169489..1171027 Pectobacterium wasabiae WPP163 8529454 YP_003258502.1 CDS Pecwa_1081 NC_013421.1 1171027 1171587 D TIGRFAM: type VI secretion-associated protein, VC_A0118 family; KEGG: pct:PC1_3244 type VI secretion-associated protein, VC_A0118 family; type VI secretion-associated protein 1171027..1171587 Pectobacterium wasabiae WPP163 8529455 YP_003258503.1 CDS Pecwa_1082 NC_013421.1 1171599 1173026 D TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: eca:ECA3433 hypothetical protein; type VI secretion-associated protein 1171599..1173026 Pectobacterium wasabiae WPP163 8529456 YP_003258504.1 CDS Pecwa_1083 NC_013421.1 1173051 1176548 D TIGRFAM: type VI hypothetical protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: pct:PC1_3242 type VI hypothetical protein IcmF; hypothetical protein 1173051..1176548 Pectobacterium wasabiae WPP163 8529457 YP_003258505.1 CDS Pecwa_1084 NC_013421.1 1176722 1178158 D PFAM: ImpA domain protein; KEGG: pct:PC1_3241 ImpA domain protein; ImpA domain-containing protein 1176722..1178158 Pectobacterium wasabiae WPP163 8529458 YP_003258506.1 CDS Pecwa_1085 NC_013421.1 1178190 1179542 D PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: pct:PC1_3240 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 1178190..1179542 Pectobacterium wasabiae WPP163 8529459 YP_003258507.1 CDS Pecwa_1086 NC_013421.1 1179911 1180231 D KEGG: dze:Dd1591_2810 hypothetical protein; hypothetical protein 1179911..1180231 Pectobacterium wasabiae WPP163 8529460 YP_003258508.1 CDS Pecwa_1087 NC_013421.1 1180299 1180625 D KEGG: cvi:CV_1430 hypothetical protein; hypothetical protein 1180299..1180625 Pectobacterium wasabiae WPP163 8529461 YP_003258509.1 CDS Pecwa_1088 NC_013421.1 1180728 1181192 D hypothetical protein 1180728..1181192 Pectobacterium wasabiae WPP163 8529462 YP_003258510.1 CDS Pecwa_1089 NC_013421.1 1181238 1181684 D hypothetical protein 1181238..1181684 Pectobacterium wasabiae WPP163 8529463 YP_003258511.1 CDS Pecwa_1090 NC_013421.1 1181735 1182106 D hypothetical protein 1181735..1182106 Pectobacterium wasabiae WPP163 8529464 YP_003258512.1 CDS Pecwa_1091 NC_013421.1 1182145 1182615 D KEGG: sea:SeAg_B3023 cytoplasmic protein; hypothetical protein 1182145..1182615 Pectobacterium wasabiae WPP163 8529465 YP_003258513.1 CDS Pecwa_1092 NC_013421.1 1182734 1183237 D hypothetical protein 1182734..1183237 Pectobacterium wasabiae WPP163 8529466 YP_003258514.1 CDS Pecwa_1093 NC_013421.1 1183338 1183808 D hypothetical protein 1183338..1183808 Pectobacterium wasabiae WPP163 8529467 YP_003258515.1 CDS Pecwa_1094 NC_013421.1 1183866 1184222 D hypothetical protein 1183866..1184222 Pectobacterium wasabiae WPP163 8529468 YP_003258516.1 CDS Pecwa_1095 NC_013421.1 1184260 1184652 D hypothetical protein 1184260..1184652 Pectobacterium wasabiae WPP163 8529469 YP_003258517.1 CDS Pecwa_1096 NC_013421.1 1184780 1185070 D hypothetical protein 1184780..1185070 Pectobacterium wasabiae WPP163 8529470 YP_003258518.1 CDS Pecwa_1097 NC_013421.1 1185195 1185662 D PFAM: ankyrin; SMART: ankyrin; KEGG: wpi:WPa_1379 ankyrin repeat domain protein; ankyrin 1185195..1185662 Pectobacterium wasabiae WPP163 8529471 YP_003258519.1 CDS Pecwa_1098 NC_013421.1 1185877 1186476 D KEGG: ccv:CCV52592_0510 hypothetical protein; hypothetical protein 1185877..1186476 Pectobacterium wasabiae WPP163 8529472 YP_003258520.1 CDS Pecwa_1099 NC_013421.1 1186629 1187102 D KEGG: esa:ESA_03895 hypothetical protein; hypothetical protein 1186629..1187102 Pectobacterium wasabiae WPP163 8529473 YP_003258521.1 CDS Pecwa_1100 NC_013421.1 1187196 1187564 D KEGG: pct:PC1_3232 hypothetical protein; hypothetical protein 1187196..1187564 Pectobacterium wasabiae WPP163 8529474 YP_003258522.1 CDS Pecwa_1101 NC_013421.1 1187672 1188046 D KEGG: hypothetical protein; hypothetical protein 1187672..1188046 Pectobacterium wasabiae WPP163 8529475 YP_003258523.1 CDS Pecwa_1102 NC_013421.1 1188346 1188807 D KEGG: eca:ECA3420 hypothetical protein; hypothetical protein 1188346..1188807 Pectobacterium wasabiae WPP163 8529476 YP_003258524.1 CDS Pecwa_1103 NC_013421.1 1189355 1190320 D PFAM: Pyoverdine biosynthesis protein; KEGG: eca:ECA3381 pyoverdine biosynthesis protein; Pyoverdine biosynthesis protein 1189355..1190320 Pectobacterium wasabiae WPP163 8529477 YP_003258525.1 CDS Pecwa_1104 NC_013421.1 1190401 1191240 D PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: eca:ECA3380 pyoverdine biosynthesis protein; taurine catabolism dioxygenase TauD/TfdA 1190401..1191240 Pectobacterium wasabiae WPP163 8529478 YP_003258526.1 CDS Pecwa_1105 NC_013421.1 1191252 1192541 D TIGRFAM: glycosyltransferase, MGT family; PFAM: glycosyl transferase family 28; UDP-glucuronosyl/UDP-glucosyltransferase; protein of unknown function DUF1205; KEGG: eca:ECA3379 glycosyltransferase; MGT family glycosyltransferase 1191252..1192541 Pectobacterium wasabiae WPP163 8529479 YP_003258527.1 CDS Pecwa_1106 NC_013421.1 1192667 1193302 R cofactor involved in the reduction of disulfides; glutaredoxin complement(1192667..1193302) Pectobacterium wasabiae WPP163 8529480 YP_003258528.1 CDS Pecwa_1107 NC_013421.1 1193503 1194384 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3376 LysR family transcriptional regulator; LysR family transcriptional regulator 1193503..1194384 Pectobacterium wasabiae WPP163 8529481 YP_003258529.1 CDS Pecwa_1108 NC_013421.1 1194506 1195696 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3375 transporter; major facilitator superfamily protein 1194506..1195696 Pectobacterium wasabiae WPP163 8529482 YP_003258530.1 CDS Pecwa_1109 NC_013421.1 1195964 1197562 R KEGG: eca:ECA3374 signaling membrane protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1195964..1197562) Pectobacterium wasabiae WPP163 8529483 YP_003258531.1 CDS Pecwa_1110 NC_013421.1 1197724 1198398 R protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC complement(1197724..1198398) Pectobacterium wasabiae WPP163 8529484 YP_003258532.1 CDS Pecwa_1111 NC_013421.1 1198482 1198970 R PFAM: cyclase/dehydrase; KEGG: pct:PC1_3216 cyclase/dehydrase; cyclase/dehydrase complement(1198482..1198970) Pectobacterium wasabiae WPP163 8529485 YP_003258533.1 CDS Pecwa_1112 NC_013421.1 1199453 1199788 D KEGG: eca:ECA3371 hypothetical protein; hypothetical protein 1199453..1199788 Pectobacterium wasabiae WPP163 8529486 YP_003258534.1 CDS Pecwa_1113 NC_013421.1 1200035 1200529 D PFAM: damage inducible protein CinA; KEGG: eca:ECA3370 competence damage-inducible protein A; competence damage-inducible protein A 1200035..1200529 Pectobacterium wasabiae WPP163 8529487 YP_003258535.1 CDS recA NC_013421.1 1200637 1201710 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1200637..1201710 Pectobacterium wasabiae WPP163 8529488 YP_003258536.1 CDS recX NC_013421.1 1201756 1202244 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1201756..1202244 Pectobacterium wasabiae WPP163 8529489 YP_003258537.1 CDS alaS NC_013421.1 1202382 1205009 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1202382..1205009 Pectobacterium wasabiae WPP163 8529490 YP_003258538.1 CDS Pecwa_1117 NC_013421.1 1205333 1205518 D affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 1205333..1205518 Pectobacterium wasabiae WPP163 8529491 YP_003258539.1 CDS Pecwa_1118 NC_013421.1 1206504 1207070 D YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; fructose-1-phosphatase 1206504..1207070 Pectobacterium wasabiae WPP163 8529494 YP_003258540.1 CDS Pecwa_1119 NC_013421.1 1207067 1207495 D KEGG: eca:ECA3364 hypothetical protein; hypothetical protein 1207067..1207495 Pectobacterium wasabiae WPP163 8529495 YP_003258541.1 CDS Pecwa_1120 NC_013421.1 1207578 1209131 D involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 1207578..1209131 Pectobacterium wasabiae WPP163 8529496 YP_003258542.1 CDS Pecwa_1121 NC_013421.1 1209285 1209800 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1209285..1209800 Pectobacterium wasabiae WPP163 8529497 YP_003258543.1 CDS Pecwa_1122 NC_013421.1 1209871 1210665 R PFAM: cytochrome C assembly protein; KEGG: pct:PC1_3205 cytochrome C assembly protein; cytochrome C assembly protein complement(1209871..1210665) Pectobacterium wasabiae WPP163 8529498 YP_003258544.1 CDS Pecwa_1123 NC_013421.1 1210834 1212195 D with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 1210834..1212195 Pectobacterium wasabiae WPP163 8529499 YP_003258545.1 CDS rpsP NC_013421.1 1212353 1212601 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1212353..1212601 Pectobacterium wasabiae WPP163 8529500 YP_003258546.1 CDS rimM NC_013421.1 1212620 1213168 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1212620..1213168 Pectobacterium wasabiae WPP163 8529501 YP_003258547.1 CDS trmD NC_013421.1 1213207 1213962 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1213207..1213962 Pectobacterium wasabiae WPP163 8529502 YP_003258548.1 CDS rplS NC_013421.1 1214025 1214372 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1214025..1214372 Pectobacterium wasabiae WPP163 8529503 YP_003258549.1 CDS Pecwa_1128 NC_013421.1 1214735 1215673 R KEGG: eca:ECA3355 hypothetical protein; hypothetical protein complement(1214735..1215673) Pectobacterium wasabiae WPP163 8529504 YP_003258550.1 CDS Pecwa_1129 NC_013421.1 1215933 1216280 R KEGG: eca:ECA3354 hypothetical protein; hypothetical protein complement(1215933..1216280) Pectobacterium wasabiae WPP163 8529505 YP_003258551.1 CDS Pecwa_1130 NC_013421.1 1216328 1217044 R unknown function; when overproduced it confers drug-resistance; two-component response-regulatory protein YehT complement(1216328..1217044) Pectobacterium wasabiae WPP163 8529506 YP_003258552.1 CDS Pecwa_1131 NC_013421.1 1217274 1218347 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1217274..1218347 Pectobacterium wasabiae WPP163 8529507 YP_003258553.1 CDS tyrA NC_013421.1 1218354 1219475 D catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 1218354..1219475 Pectobacterium wasabiae WPP163 8529508 YP_003258554.1 CDS pheA NC_013421.1 1219561 1220721 R catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase complement(1219561..1220721) Pectobacterium wasabiae WPP163 8529509 YP_003258555.1 CDS Pecwa_1134 NC_013421.1 1221073 1221411 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: eca:ECA3349 sigma(54) modulation protein; sigma 54 modulation protein/ribosomal protein S30EA complement(1221073..1221411) Pectobacterium wasabiae WPP163 8529510 YP_003258556.1 CDS Pecwa_1135 NC_013421.1 1221736 1222470 R with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline; outer membrane protein assembly complex subunit YfiO complement(1221736..1222470) Pectobacterium wasabiae WPP163 8529511 YP_003258557.1 CDS rluD NC_013421.1 1222605 1223582 D responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase D 1222605..1223582 Pectobacterium wasabiae WPP163 8529512 YP_003258558.1 CDS Pecwa_1137 NC_013421.1 1223626 1224351 D PFAM: protein of unknown function DUF152; KEGG: pct:PC1_3142 hypothetical protein; hypothetical protein 1223626..1224351 Pectobacterium wasabiae WPP163 8529513 YP_003258559.1 CDS Pecwa_1138 NC_013421.1 1224485 1227061 D KEGG: eca:ECA3345 protein disaggregation chaperone; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; ATPase AAA; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; protein disaggregation chaperone 1224485..1227061 Pectobacterium wasabiae WPP163 8529514 YP_003258560.1 CDS Pecwa_1139 NC_013421.1 1233107 1233892 D PFAM: endonuclease/exonuclease/phosphatase; KEGG: pct:PC1_3140 endonuclease/exonuclease/phosphatase; hypothetical protein 1233107..1233892 Pectobacterium wasabiae WPP163 8529521 YP_003258561.1 CDS mltD NC_013421.1 1233962 1235335 R catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; membrane-bound lytic murein transglycosylase D complement(1233962..1235335) Pectobacterium wasabiae WPP163 8529522 YP_003258562.1 CDS Pecwa_1141 NC_013421.1 1235406 1236161 R KEGG: eca:ECA3342 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase complement(1235406..1236161) Pectobacterium wasabiae WPP163 8529523 YP_003258563.1 CDS Pecwa_1142 NC_013421.1 1236204 1236914 D PFAM: methyltransferase type 11; KEGG: eca:ECA3341 hypothetical protein; methyltransferase type 11 1236204..1236914 Pectobacterium wasabiae WPP163 8529524 YP_003258564.1 CDS rnhA NC_013421.1 1236934 1237398 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H complement(1236934..1237398) Pectobacterium wasabiae WPP163 8529525 YP_003258565.1 CDS Pecwa_1144 NC_013421.1 1237454 1238191 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1237454..1238191 Pectobacterium wasabiae WPP163 8529526 YP_003258566.1 CDS nrdF NC_013421.1 1238548 1239510 R B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta complement(1238548..1239510) Pectobacterium wasabiae WPP163 8529528 YP_003258567.1 CDS Pecwa_1146 NC_013421.1 1239535 1241700 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(1239535..1241700) Pectobacterium wasabiae WPP163 8529529 YP_003258568.1 CDS nrdI NC_013421.1 1241679 1242086 R in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein complement(1241679..1242086) Pectobacterium wasabiae WPP163 8529530 YP_003258569.1 CDS Pecwa_1148 NC_013421.1 1242097 1242336 R TIGRFAM: glutaredoxin; PFAM: glutaredoxin; KEGG: eca:ECA3335 glutaredoxin; glutaredoxin complement(1242097..1242336) Pectobacterium wasabiae WPP163 8529531 YP_003258570.1 CDS Pecwa_1149 NC_013421.1 1242569 1242715 D hypothetical protein 1242569..1242715 Pectobacterium wasabiae WPP163 8529532 YP_003258571.1 CDS Pecwa_1150 NC_013421.1 1242805 1243152 R KEGG: eca:ECA3332 hypothetical protein; hypothetical protein complement(1242805..1243152) Pectobacterium wasabiae WPP163 8529533 YP_003258572.1 CDS Pecwa_1151 NC_013421.1 1243505 1245190 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3331 ABC transporter permease; binding-protein-dependent transporters inner membrane component 1243505..1245190 Pectobacterium wasabiae WPP163 8529534 YP_003258573.1 CDS Pecwa_1152 NC_013421.1 1245195 1246280 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: pct:PC1_3126 ABC transporter; ABC transporter 1245195..1246280 Pectobacterium wasabiae WPP163 8529535 YP_003258574.1 CDS Pecwa_1153 NC_013421.1 1246281 1246715 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3329 acetyltransferase; N-acetyltransferase GCN5 complement(1246281..1246715) Pectobacterium wasabiae WPP163 8529536 YP_003258575.1 CDS Pecwa_1154 NC_013421.1 1246863 1247399 D KEGG: pct:PC1_3124 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1246863..1247399 Pectobacterium wasabiae WPP163 8529537 YP_003258576.1 CDS Pecwa_1155 NC_013421.1 1247459 1248100 R catalyzes the interconversion of bicarbonate and carbon dioxide; carbonic anhydrase complement(1247459..1248100) Pectobacterium wasabiae WPP163 8529538 YP_003258577.1 CDS Pecwa_1156 NC_013421.1 1248239 1249177 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3325 ABC transporter ATP-binding protein; ABC transporter 1248239..1249177 Pectobacterium wasabiae WPP163 8529539 YP_003258578.1 CDS Pecwa_1157 NC_013421.1 1249174 1249944 D PFAM: ABC transporter; KEGG: eca:ECA3324 ABC transporter integral membrane protein; ABC transporter 1249174..1249944 Pectobacterium wasabiae WPP163 8529540 YP_003258579.1 CDS Pecwa_1158 NC_013421.1 1250000 1250380 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(1250000..1250380) Pectobacterium wasabiae WPP163 8529541 YP_003258580.1 CDS panC NC_013421.1 1250398 1251252 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(1250398..1251252) Pectobacterium wasabiae WPP163 8529542 YP_003258581.1 CDS panB NC_013421.1 1251440 1252234 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(1251440..1252234) Pectobacterium wasabiae WPP163 8529543 YP_003258582.1 CDS Pecwa_1161 NC_013421.1 1252351 1252848 R KEGG: eca:ECA3320 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(1252351..1252848) Pectobacterium wasabiae WPP163 8529544 YP_003258583.1 CDS pcnB NC_013421.1 1252848 1254296 R polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase I complement(1252848..1254296) Pectobacterium wasabiae WPP163 8529545 YP_003258584.1 CDS Pecwa_1163 NC_013421.1 1254367 1255335 R this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase complement(1254367..1255335) Pectobacterium wasabiae WPP163 8529546 YP_003258585.1 CDS dksA NC_013421.1 1255464 1255919 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: eca:ECA3317 DnaK transcriptional regulator DksA; RNA polymerase-binding transcription factor complement(1255464..1255919) Pectobacterium wasabiae WPP163 8529547 YP_003258586.1 CDS Pecwa_1165 NC_013421.1 1256312 1257016 R Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A complement(1256312..1257016) Pectobacterium wasabiae WPP163 8529548 YP_003258587.1 CDS Pecwa_1166 NC_013421.1 1257187 1257717 R TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: eca:ECA3315 2'-5' RNA ligase; 2'-5' RNA ligase complement(1257187..1257717) Pectobacterium wasabiae WPP163 8529549 YP_003258588.1 CDS Pecwa_1167 NC_013421.1 1257811 1260255 D similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB 1257811..1260255 Pectobacterium wasabiae WPP163 8529550 YP_003258589.1 CDS mrcB NC_013421.1 1260358 1262838 D bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; penicillin-binding protein 1b 1260358..1262838 Pectobacterium wasabiae WPP163 8529551 YP_003258590.1 CDS Pecwa_1169 NC_013421.1 1263239 1264171 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit 1263239..1264171 Pectobacterium wasabiae WPP163 8529552 YP_003258591.1 CDS Pecwa_1170 NC_013421.1 1264188 1265114 D Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit 1264188..1265114 Pectobacterium wasabiae WPP163 8529553 YP_003258592.1 CDS Pecwa_1171 NC_013421.1 1265107 1267125 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 1265107..1267125 Pectobacterium wasabiae WPP163 8529554 YP_003258593.1 CDS Pecwa_1172 NC_013421.1 1267168 1267758 R PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA3309 hypothetical protein; lysine exporter protein LysE/YggA complement(1267168..1267758) Pectobacterium wasabiae WPP163 8529555 YP_003258594.1 CDS Pecwa_1173 NC_013421.1 1267894 1269354 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: eca:ECA3308 aminotransferase; GntR family transcriptional regulator 1267894..1269354 Pectobacterium wasabiae WPP163 8529556 YP_003258595.1 CDS Pecwa_1174 NC_013421.1 1269357 1269980 R PFAM: glutathione S-transferase domain; KEGG: pct:PC1_3104 glutathione S-transferase; glutathione S-transferase complement(1269357..1269980) Pectobacterium wasabiae WPP163 8529557 YP_003258596.1 CDS Pecwa_1175 NC_013421.1 1270143 1271423 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(1270143..1271423) Pectobacterium wasabiae WPP163 8529558 YP_003258597.1 CDS Pecwa_1176 NC_013421.1 1271692 1272039 D TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: eca:ECA3306 hypothetical protein; iron-sulfur cluster assembly accessory protein 1271692..1272039 Pectobacterium wasabiae WPP163 8529559 YP_003258598.1 CDS Pecwa_1177 NC_013421.1 1272169 1272447 R KEGG: eca:ECA3305 lipoprotein; lipoprotein complement(1272169..1272447) Pectobacterium wasabiae WPP163 8529560 YP_003258599.1 CDS Pecwa_1178 NC_013421.1 1272659 1273486 R solute binding component of the vitamin B12 transport system BtuCDF; vitamin B12-transporter protein BtuF complement(1272659..1273486) Pectobacterium wasabiae WPP163 8529561 YP_003258600.1 CDS Pecwa_1179 NC_013421.1 1273490 1274188 R enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(1273490..1274188) Pectobacterium wasabiae WPP163 8529562 YP_003258601.1 CDS dgt NC_013421.1 1274379 1275890 D forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 1274379..1275890 Pectobacterium wasabiae WPP163 8529563 YP_003258602.1 CDS Pecwa_1181 NC_013421.1 1276080 1277543 D protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 1276080..1277543 Pectobacterium wasabiae WPP163 8529564 YP_003258603.1 CDS Pecwa_1182 NC_013421.1 1277776 1278933 D regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; carbohydrate diacid transcriptional activator CdaR 1277776..1278933 Pectobacterium wasabiae WPP163 8529565 YP_003258604.1 CDS Pecwa_1183 NC_013421.1 1279440 1280450 D TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA3299 sulfate-binding protein; sulfate ABC transporter substrate-binding protein 1279440..1280450 Pectobacterium wasabiae WPP163 8529566 YP_003258605.1 CDS Pecwa_1184 NC_013421.1 1280607 1281419 D TIGRFAM: sulfate ABC transporter inner membrane protein CysT; sulfate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_3093 sulfate ABC transporter inner membrane protein CysT; sulfate ABC transporter permease 1280607..1281419 Pectobacterium wasabiae WPP163 8529567 YP_003258606.1 CDS Pecwa_1185 NC_013421.1 1281432 1282313 D TIGRFAM: sulfate ABC transporter inner membrane protein CysW; sulfate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3297 sulfate ABC transporter permease; sulfate ABC transporter permease 1281432..1282313 Pectobacterium wasabiae WPP163 8529568 YP_003258607.1 CDS Pecwa_1186 NC_013421.1 1282303 1283295 D KEGG: eca:ECA3296 sulfate ABC transporter ATP-binding protein; TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; sulfate ABC transporter ATPase 1282303..1283295 Pectobacterium wasabiae WPP163 8529569 YP_003258608.1 CDS Pecwa_1187 NC_013421.1 1283380 1283814 R PFAM: DoxX family protein; KEGG: eca:ECA3295 hypothetical protein; DoxX family protein complement(1283380..1283814) Pectobacterium wasabiae WPP163 8529570 YP_003258609.1 CDS Pecwa_1188 NC_013421.1 1284136 1284717 R PFAM: regulatory protein TetR; KEGG: eca:ECA3294 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1284136..1284717) Pectobacterium wasabiae WPP163 8529571 YP_003258610.1 CDS Pecwa_1189 NC_013421.1 1284802 1285851 R PFAM: aldo/keto reductase; KEGG: eca:ECA3293 oxidoreductase; aldo/keto reductase complement(1284802..1285851) Pectobacterium wasabiae WPP163 8529572 YP_003258611.1 CDS Pecwa_1190 NC_013421.1 1286038 1287144 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eca:ECA3292 oxidoreductase; NADH:flavin oxidoreductase 1286038..1287144 Pectobacterium wasabiae WPP163 8529573 YP_003258612.1 CDS gltX NC_013421.1 1288443 1289858 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1288443..1289858 Pectobacterium wasabiae WPP163 8529578 YP_003258613.1 CDS Pecwa_1192 NC_013421.1 1289974 1290963 R PFAM: esterase; KEGG: eca:ECA3290 hypothetical protein; esterase complement(1289974..1290963) Pectobacterium wasabiae WPP163 8529579 YP_003258614.1 CDS Pecwa_1193 NC_013421.1 1291484 1292170 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(1291484..1292170) Pectobacterium wasabiae WPP163 8529582 YP_003258615.1 CDS Pecwa_1194 NC_013421.1 1292579 1292962 D stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 1292579..1292962 Pectobacterium wasabiae WPP163 8529583 YP_003258616.1 CDS Pecwa_1195 NC_013421.1 1293035 1294360 R facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB complement(1293035..1294360) Pectobacterium wasabiae WPP163 8529584 YP_003258617.1 CDS Pecwa_1196 NC_013421.1 1294495 1295241 D PFAM: methyltransferase small; KEGG: eca:ECA3286 hypothetical protein; methyltransferase small 1294495..1295241 Pectobacterium wasabiae WPP163 8529585 YP_003258618.1 CDS Pecwa_1197 NC_013421.1 1295330 1296931 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(1295330..1296931) Pectobacterium wasabiae WPP163 8529586 YP_003258619.1 CDS Pecwa_1198 NC_013421.1 1297312 1297887 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 1297312..1297887 Pectobacterium wasabiae WPP163 8529587 YP_003258620.1 CDS Pecwa_1199 NC_013421.1 1297947 1298594 D PFAM: anti sigma-E protein RseA family protein; anti sigma-E protein RseA domain protein; KEGG: eca:ECA3283 anti-RNA polymerase sigma factor SigE; anti-RNA polymerase sigma factor SigE 1297947..1298594 Pectobacterium wasabiae WPP163 8529588 YP_003258621.1 CDS rseB NC_013421.1 1298594 1299556 D periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE 1298594..1299556 Pectobacterium wasabiae WPP163 8529589 YP_003258622.1 CDS Pecwa_1201 NC_013421.1 1299553 1300005 D involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC 1299553..1300005 Pectobacterium wasabiae WPP163 8529590 YP_003258623.1 CDS Pecwa_1202 NC_013421.1 1300202 1302100 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1300202..1302100 Pectobacterium wasabiae WPP163 8529591 YP_003258624.1 CDS Pecwa_1203 NC_013421.1 1302117 1303082 D catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I 1302117..1303082 Pectobacterium wasabiae WPP163 8529592 YP_003258625.1 CDS rnc NC_013421.1 1303355 1304035 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1303355..1304035 Pectobacterium wasabiae WPP163 8529593 YP_003258626.1 CDS era NC_013421.1 1304032 1304937 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1304032..1304937 Pectobacterium wasabiae WPP163 8529594 YP_003258627.1 CDS recO NC_013421.1 1304949 1305686 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 1304949..1305686 Pectobacterium wasabiae WPP163 8529595 YP_003258628.1 CDS Pecwa_1207 NC_013421.1 1305767 1306498 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1305767..1306498 Pectobacterium wasabiae WPP163 8529596 YP_003258629.1 CDS acpS NC_013421.1 1306498 1306878 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1306498..1306878 Pectobacterium wasabiae WPP163 8529597 YP_003258630.1 CDS Pecwa_1209 NC_013421.1 1306896 1307156 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA3273 ferredoxin; 4Fe-4S ferredoxin complement(1306896..1307156) Pectobacterium wasabiae WPP163 8529598 YP_003258631.1 CDS Pecwa_1210 NC_013421.1 1307643 1308419 D in Escherichia coli this protein is involved in flagellar function; EAL domain-containing protein 1307643..1308419 Pectobacterium wasabiae WPP163 8529599 YP_003258632.1 CDS Pecwa_1211 NC_013421.1 1309207 1310721 D KEGG: eca:ECA3270 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 1309207..1310721 Pectobacterium wasabiae WPP163 8529600 YP_003258633.1 CDS Pecwa_1212 NC_013421.1 1310766 1312127 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: hypothetical protein; KEGG: eca:ECA3269 HlyD family hypothetical protein; HlyD family type I secretion membrane fusion protein complement(1310766..1312127) Pectobacterium wasabiae WPP163 8529601 YP_003258634.1 CDS Pecwa_1213 NC_013421.1 1312114 1314330 R KEGG: eca:ECA3268 toxin secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: ATPase AAA; type I secretion system ATPase complement(1312114..1314330) Pectobacterium wasabiae WPP163 8529602 YP_003258635.1 CDS Pecwa_1214 NC_013421.1 1314410 1315762 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: eca:ECA3267 agglutination protein; TolC family type I secretion outer membrane protein complement(1314410..1315762) Pectobacterium wasabiae WPP163 8529603 YP_003258636.1 CDS Pecwa_1215 NC_013421.1 1316138 1323766 D TIGRFAM: type 1 secretion C-terminal target domain; PFAM: Hemolysin-type calcium-binding region; KEGG: eca:ECA3266 hemagglutinin/hemolysin-related protein; type 1 secretion target domain-containing protein 1316138..1323766 Pectobacterium wasabiae WPP163 8529604 YP_003258637.1 CDS Pecwa_1216 NC_013421.1 1323826 1324170 D KEGG: pct:PC1_3059 hypothetical protein; hypothetical protein 1323826..1324170 Pectobacterium wasabiae WPP163 8529605 YP_003258638.1 CDS Pecwa_1217 NC_013421.1 1324293 1326245 R KEGG: eca:ECA3264 signaling membrane protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; diguanylate cyclase/phosphodiesterase with extracellular sensor complement(1324293..1326245) Pectobacterium wasabiae WPP163 8529606 YP_003258639.1 CDS Pecwa_1218 NC_013421.1 1326255 1326944 R PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: pct:PC1_3057 transglutaminase family protein cysteine peptidase BTLCP; transglutaminase complement(1326255..1326944) Pectobacterium wasabiae WPP163 8529607 YP_003258640.1 CDS murQ NC_013421.1 1327084 1328010 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 1327084..1328010 Pectobacterium wasabiae WPP163 8529608 YP_003258641.1 CDS Pecwa_1220 NC_013421.1 1328043 1328681 D TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: eca:ECA3261 hypothetical protein; hypothetical protein 1328043..1328681 Pectobacterium wasabiae WPP163 8529609 YP_003258642.1 CDS Pecwa_1221 NC_013421.1 1328956 1329462 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: eca:ECA3260 tRNA-specific adenosine deaminase; tRNA-specific adenosine deaminase 1328956..1329462 Pectobacterium wasabiae WPP163 8529610 YP_003258643.1 CDS Pecwa_1222 NC_013421.1 1329617 1331143 R YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; transglycosylase complement(1329617..1331143) Pectobacterium wasabiae WPP163 8529611 YP_003258644.1 CDS Pecwa_1223 NC_013421.1 1331342 1335229 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 1331342..1335229 Pectobacterium wasabiae WPP163 8529612 YP_003258645.1 CDS Pecwa_1224 NC_013421.1 1335934 1337385 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pct:PC1_3051 histidine kinase; integral membrane sensor signal transduction histidine kinase 1335934..1337385 Pectobacterium wasabiae WPP163 8529613 YP_003258646.1 CDS Pecwa_1225 NC_013421.1 1337406 1338242 D KEGG: eca:ECA3256 hypothetical protein; hypothetical protein 1337406..1338242 Pectobacterium wasabiae WPP163 8529614 YP_003258647.1 CDS Pecwa_1226 NC_013421.1 1338239 1339576 D PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: pct:PC1_3049 two component, sigma54 specific, transcriptional regulator, Fis family; two component, sigma54 specific, Fis family transcriptional regulator 1338239..1339576 Pectobacterium wasabiae WPP163 8529615 YP_003258648.1 CDS Pecwa_1227 NC_013421.1 1339865 1340203 D indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; nitrogen regulatory protein P-II 1 1339865..1340203 Pectobacterium wasabiae WPP163 8529616 YP_003258649.1 CDS Pecwa_1228 NC_013421.1 1340331 1341437 R PFAM: pectinesterase; KEGG: eca:ECA3253 pectinesterase A; pectinesterase complement(1340331..1341437) Pectobacterium wasabiae WPP163 8529617 YP_003258650.1 CDS Pecwa_1229 NC_013421.1 1341539 1343197 R KEGG: pct:PC1_3046 pectin acetylesterase; pectin acetylesterase complement(1341539..1343197) Pectobacterium wasabiae WPP163 8529618 YP_003258651.1 CDS Pecwa_1230 NC_013421.1 1343709 1344899 R flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase complement(1343709..1344899) Pectobacterium wasabiae WPP163 8529619 YP_003258652.1 CDS glyA NC_013421.1 1345260 1346513 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1345260..1346513 Pectobacterium wasabiae WPP163 8529620 YP_003258653.1 CDS Pecwa_1232 NC_013421.1 1346876 1348036 D transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; 3-phenylpropionic acid transporter 1346876..1348036 Pectobacterium wasabiae WPP163 8529621 YP_003258654.1 CDS Pecwa_1233 NC_013421.1 1348119 1348727 D PFAM: protein of unknown function DUF1007; KEGG: eca:ECA3248 hypothetical protein; hypothetical protein 1348119..1348727 Pectobacterium wasabiae WPP163 8529622 YP_003258655.1 CDS Pecwa_1234 NC_013421.1 1348718 1349791 D PFAM: high-affinity nickel-transporter; KEGG: eca:ECA3247 hypothetical protein; high-affinity nickel-transporter 1348718..1349791 Pectobacterium wasabiae WPP163 8529623 YP_003258656.1 CDS Pecwa_1235 NC_013421.1 1349911 1351038 D PFAM: periplasmic binding protein; KEGG: eca:ECA3246 periplasmic substrate-binding transporter; periplasmic binding protein 1349911..1351038 Pectobacterium wasabiae WPP163 8529624 YP_003258657.1 CDS Pecwa_1236 NC_013421.1 1351460 1353127 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3245 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1351460..1353127 Pectobacterium wasabiae WPP163 8529625 YP_003258658.1 CDS Pecwa_1237 NC_013421.1 1353215 1353538 D KEGG: eca:ECA3244 hypothetical protein; hypothetical protein 1353215..1353538 Pectobacterium wasabiae WPP163 8529626 YP_003258659.1 CDS Pecwa_1238 NC_013421.1 1353595 1354395 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3243 ferric-enterobactin ABC transporter ATP-binding protein; ABC transporter complement(1353595..1354395) Pectobacterium wasabiae WPP163 8529627 YP_003258660.1 CDS Pecwa_1239 NC_013421.1 1354392 1355474 R PFAM: transporter permease; KEGG: pct:PC1_3036 transporter permease; transporter permease complement(1354392..1355474) Pectobacterium wasabiae WPP163 8529628 YP_003258661.1 CDS Pecwa_1240 NC_013421.1 1355481 1356599 R PFAM: periplasmic binding protein; KEGG: pct:PC1_3035 periplasmic binding protein; periplasmic binding protein complement(1355481..1356599) Pectobacterium wasabiae WPP163 8529629 YP_003258662.1 CDS Pecwa_1241 NC_013421.1 1356792 1357595 R PFAM: inositol monophosphatase; KEGG: eca:ECA3240 inositol monophosphatase; inositol monophosphatase complement(1356792..1357595) Pectobacterium wasabiae WPP163 8529630 YP_003258663.1 CDS Pecwa_1242 NC_013421.1 1357738 1358463 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: eca:ECA3239 RNA methyltransferase; RNA methyltransferase, TrmH family, group 1 1357738..1358463 Pectobacterium wasabiae WPP163 8529631 YP_003258664.1 CDS Pecwa_1243 NC_013421.1 1358583 1359077 D regulates the expression of the iscRSUA operon; IscR family transcriptional regulator 1358583..1359077 Pectobacterium wasabiae WPP163 8529632 YP_003258665.1 CDS Pecwa_1244 NC_013421.1 1359333 1360547 D catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 1359333..1360547 Pectobacterium wasabiae WPP163 8529633 YP_003258666.1 CDS Pecwa_1245 NC_013421.1 1360572 1360958 D TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: pct:PC1_3030 FeS cluster assembly scaffold IscU; scaffold protein 1360572..1360958 Pectobacterium wasabiae WPP163 8529634 YP_003258667.1 CDS iscA NC_013421.1 1361040 1361363 D forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein 1361040..1361363 Pectobacterium wasabiae WPP163 8529635 YP_003258668.1 CDS hscB NC_013421.1 1361435 1361953 D J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 1361435..1361953 Pectobacterium wasabiae WPP163 8529636 YP_003258669.1 CDS hscA NC_013421.1 1362028 1363878 D involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 1362028..1363878 Pectobacterium wasabiae WPP163 8529637 YP_003258670.1 CDS Pecwa_1249 NC_013421.1 1363880 1364215 D TIGRFAM: ferredoxin 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: pct:PC1_3026 ferredoxin 2Fe-2S type, ISC system; 2Fe-2S type ferredoxin 1363880..1364215 Pectobacterium wasabiae WPP163 8529638 YP_003258671.1 CDS Pecwa_1250 NC_013421.1 1364237 1364437 D TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: pct:PC1_3025 FeS assembly protein IscX; hypothetical protein 1364237..1364437 Pectobacterium wasabiae WPP163 8529639 YP_003258672.1 CDS Pecwa_1251 NC_013421.1 1364591 1365901 D catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 1364591..1365901 Pectobacterium wasabiae WPP163 8529640 YP_003258673.1 CDS Pecwa_1252 NC_013421.1 1365996 1366790 D enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB 1365996..1366790 Pectobacterium wasabiae WPP163 8529641 YP_003258674.1 CDS sseA NC_013421.1 1366884 1367753 R catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; 3-mercaptopyruvate sulfurtransferase complement(1366884..1367753) Pectobacterium wasabiae WPP163 8529642 YP_003258675.1 CDS ndk NC_013421.1 1368215 1368643 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1368215..1368643 Pectobacterium wasabiae WPP163 8529643 YP_003258676.1 CDS Pecwa_1255 NC_013421.1 1368888 1370090 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1368888..1370090 Pectobacterium wasabiae WPP163 8529644 YP_003258677.1 CDS Pecwa_1256 NC_013421.1 1370281 1371066 D KEGG: eca:ECA3222 hypothetical protein; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein; SMART: Tetratricopeptide repeat; type IV pilus biogenesis/stability protein PilW 1370281..1371066 Pectobacterium wasabiae WPP163 8529645 YP_003258678.1 CDS Pecwa_1257 NC_013421.1 1371056 1372054 D SMART: hypothetical protein; KEGG: eca:ECA3221 hypothetical protein; cytoskeletal protein RodZ 1371056..1372054 Pectobacterium wasabiae WPP163 8529646 YP_003258679.1 CDS ispG NC_013421.1 1372095 1373216 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1372095..1373216 Pectobacterium wasabiae WPP163 8529647 YP_003258680.1 CDS hisS NC_013421.1 1373354 1374628 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1373354..1374628 Pectobacterium wasabiae WPP163 8529648 YP_003258681.1 CDS Pecwa_1260 NC_013421.1 1374642 1375262 D PFAM: protein of unknown function DUF2133; KEGG: eca:ECA3218 hypothetical protein; hypothetical protein 1374642..1375262 Pectobacterium wasabiae WPP163 8529649 YP_003258682.1 CDS Pecwa_1261 NC_013421.1 1375273 1376454 D with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL 1375273..1376454 Pectobacterium wasabiae WPP163 8529650 YP_003258683.1 CDS engA NC_013421.1 1376599 1378086 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1376599..1378086 Pectobacterium wasabiae WPP163 8529651 YP_003258684.1 CDS Pecwa_1263 NC_013421.1 1378161 1379120 D PFAM: hypothetical protein; KEGG: eca:ECA3215 transporter; hypothetical protein 1378161..1379120 Pectobacterium wasabiae WPP163 8529652 YP_003258685.1 CDS Pecwa_1264 NC_013421.1 1379170 1379394 D PFAM: protein of unknown function DUF1407; KEGG: pct:PC1_3008 hypothetical protein; hypothetical protein 1379170..1379394 Pectobacterium wasabiae WPP163 8529653 YP_003258686.1 CDS Pecwa_1265 NC_013421.1 1379403 1379747 R KEGG: pct:PC1_3007 hypothetical protein; hypothetical protein complement(1379403..1379747) Pectobacterium wasabiae WPP163 8529654 YP_003258687.1 CDS Pecwa_1266 NC_013421.1 1379744 1380787 R PFAM: peptidase M4 thermolysin; peptidase M4 thermolysin; KEGG: eca:ECA3211 extracellular metalloprotease; peptidase M4 thermolysin complement(1379744..1380787) Pectobacterium wasabiae WPP163 8529655 YP_003258688.1 CDS xseA NC_013421.1 1381011 1382405 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(1381011..1382405) Pectobacterium wasabiae WPP163 8529656 YP_003258689.1 CDS guaA NC_013421.1 1384151 1385728 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1384151..1385728 Pectobacterium wasabiae WPP163 8529658 YP_003258690.1 CDS Pecwa_1271 NC_013421.1 1386140 1386994 D PFAM: RIO-like kinase; SMART: protein of unknown function RIO1; KEGG: eca:ECA3207 hypothetical protein; RIO-like kinase 1386140..1386994 Pectobacterium wasabiae WPP163 8529660 YP_003258691.1 CDS Pecwa_1273 NC_013421.1 1387271 1388149 R PFAM: aldo/keto reductase; KEGG: xcv:XCV4212 oxidoreductase; oxidoreductase complement(1387271..1388149) Pectobacterium wasabiae WPP163 8529662 YP_003258692.1 CDS Pecwa_1274 NC_013421.1 1388179 1389102 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: dze:Dd1591_0122 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase zinc-binding domain protein complement(1388179..1389102) Pectobacterium wasabiae WPP163 8529663 YP_003258693.1 CDS Pecwa_1275 NC_013421.1 1389219 1389821 D PFAM: regulatory protein TetR; KEGG: rlt:Rleg2_2308 TetR family transcriptional regulator; TetR family transcriptional regulator 1389219..1389821 Pectobacterium wasabiae WPP163 8529664 YP_003258694.1 CDS Pecwa_1277 NC_013421.1 1390188 1391633 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: pct:PC1_2996 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein complement(1390188..1391633) Pectobacterium wasabiae WPP163 8529666 YP_003258695.1 CDS Pecwa_1280 NC_013421.1 1392619 1392927 D PFAM: YCII-related; KEGG: pct:PC1_2992 YCII-related protein; hypothetical protein 1392619..1392927 Pectobacterium wasabiae WPP163 8529669 YP_003258696.1 CDS Pecwa_1281 NC_013421.1 1393036 1394166 R PFAM: choloylglycine hydrolase; KEGG: eca:ECA3205 exported choloylglycine hydrolase; choloylglycine hydrolase complement(1393036..1394166) Pectobacterium wasabiae WPP163 8529670 YP_003258697.1 CDS Pecwa_1282 NC_013421.1 1394342 1394779 R PFAM: GCN5-related N-acetyltransferase; KEGG: pst:PSPTO_1003 acetyltransferase; N-acetyltransferase GCN5 complement(1394342..1394779) Pectobacterium wasabiae WPP163 8529671 YP_003258698.1 CDS Pecwa_1283 NC_013421.1 1394866 1395264 R PFAM: protein of unknown function DUF1486; KEGG: pct:PC1_2990 hypothetical protein; hypothetical protein complement(1394866..1395264) Pectobacterium wasabiae WPP163 8529672 YP_003258699.1 CDS Pecwa_1284 NC_013421.1 1395522 1396295 D KEGG: pct:PC1_2989 hypothetical protein; hypothetical protein 1395522..1396295 Pectobacterium wasabiae WPP163 8529673 YP_003258700.1 CDS Pecwa_1285 NC_013421.1 1396638 1397498 D PFAM: protein of unknown function DUF81; KEGG: pct:PC1_2986 hypothetical protein; hypothetical protein 1396638..1397498 Pectobacterium wasabiae WPP163 8529674 YP_003258701.1 CDS Pecwa_1286 NC_013421.1 1397841 1398752 D hypothetical protein 1397841..1398752 Pectobacterium wasabiae WPP163 8529675 YP_003258702.1 CDS Pecwa_1287 NC_013421.1 1399079 1399897 D KEGG: pct:PC1_2985 hypothetical protein; hypothetical protein 1399079..1399897 Pectobacterium wasabiae WPP163 8529676 YP_003258703.1 CDS Pecwa_1288 NC_013421.1 1399958 1400968 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: pct:PC1_2984 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase zinc-binding domain protein complement(1399958..1400968) Pectobacterium wasabiae WPP163 8529677 YP_003258704.1 CDS Pecwa_1289 NC_013421.1 1401205 1402128 R KEGG: eca:ECA3199 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1401205..1402128) Pectobacterium wasabiae WPP163 8529678 YP_003258705.1 CDS Pecwa_1290 NC_013421.1 1402737 1402949 D hypothetical protein 1402737..1402949 Pectobacterium wasabiae WPP163 8529679 YP_003258706.1 CDS Pecwa_1291 NC_013421.1 1402922 1403224 D KEGG: dze:Dd1591_2791 hypothetical protein; hypothetical protein 1402922..1403224 Pectobacterium wasabiae WPP163 8529680 YP_003258707.1 CDS Pecwa_1292 NC_013421.1 1403300 1404319 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: eca:ECA3198 zinc-binding dehydrogenase; alcohol dehydrogenase zinc-binding domain protein complement(1403300..1404319) Pectobacterium wasabiae WPP163 8529681 YP_003258708.1 CDS Pecwa_1294 NC_013421.1 1405035 1406453 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1405035..1406453 Pectobacterium wasabiae WPP163 8529683 YP_003258709.1 CDS Pecwa_1295 NC_013421.1 1406453 1407067 D TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: msu:MS0334 LeuD protein; 3-isopropylmalate dehydratase small subunit 1406453..1407067 Pectobacterium wasabiae WPP163 8529684 YP_003258710.1 CDS Pecwa_1296 NC_013421.1 1407083 1407931 D PFAM: fumarylacetoacetate hydrolase; KEGG: eca:ECA2575 fumarylacetoacetate hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1407083..1407931 Pectobacterium wasabiae WPP163 8529685 YP_003258711.1 CDS Pecwa_1297 NC_013421.1 1408008 1409354 D PFAM: citrate carrier protein; KEGG: spe:Spro_2099 citrate carrier protein; citrate carrier protein 1408008..1409354 Pectobacterium wasabiae WPP163 8529686 YP_003258712.1 CDS Pecwa_1298 NC_013421.1 1409390 1410295 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: msu:MS0336 LysR protein; LysR family transcriptional regulator complement(1409390..1410295) Pectobacterium wasabiae WPP163 8529687 YP_003258713.1 CDS Pecwa_1300 NC_013421.1 1410950 1411744 D catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 1410950..1411744 Pectobacterium wasabiae WPP163 8529689 YP_003258714.1 CDS Pecwa_1301 NC_013421.1 1411741 1412544 D catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 1411741..1412544 Pectobacterium wasabiae WPP163 8529690 YP_003258715.1 CDS Pecwa_1302 NC_013421.1 1412823 1413230 D PFAM: phosphate-starvation-inducible E; KEGG: eca:ECA3195 phosphate-starvation-inducible protein PsiE; phosphate-starvation-inducible protein PsiE 1412823..1413230 Pectobacterium wasabiae WPP163 8529691 YP_003258716.1 CDS Pecwa_1303 NC_013421.1 1413244 1414143 R cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase complement(1413244..1414143) Pectobacterium wasabiae WPP163 8529692 YP_003258717.1 CDS Pecwa_1304 NC_013421.1 1414773 1416134 R PFAM: peptidase U32; KEGG: pct:PC1_2976 peptidase U32; peptidase U32 complement(1414773..1416134) Pectobacterium wasabiae WPP163 8529693 YP_003258718.1 CDS Pecwa_1305 NC_013421.1 1416329 1417288 R KEGG: eca:ECA3192 hypothetical protein; glutathione transferase complement(1416329..1417288) Pectobacterium wasabiae WPP163 8529694 YP_003258719.1 CDS Pecwa_1306 NC_013421.1 1417570 1418121 R PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_2974 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1417570..1418121) Pectobacterium wasabiae WPP163 8529695 YP_003258720.1 CDS Pecwa_1307 NC_013421.1 1418182 1418910 R response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; BaeR family transcriptional regulator complement(1418182..1418910) Pectobacterium wasabiae WPP163 8529696 YP_003258721.1 CDS Pecwa_1308 NC_013421.1 1418944 1420317 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA3188 signal transduction histidine-protein kinase BaeS; signal transduction histidine-protein kinase BaeS complement(1418944..1420317) Pectobacterium wasabiae WPP163 8529697 YP_003258722.1 CDS Pecwa_1309 NC_013421.1 1420325 1421725 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3187 multidrug efflux system protein MdtE; multidrug efflux system protein MdtE complement(1420325..1421725) Pectobacterium wasabiae WPP163 8529698 YP_003258723.1 CDS Pecwa_1310 NC_013421.1 1422138 1425218 R Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtC complement(1422138..1425218) Pectobacterium wasabiae WPP163 8529699 YP_003258724.1 CDS Pecwa_1311 NC_013421.1 1425215 1428337 R Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtB complement(1425215..1428337) Pectobacterium wasabiae WPP163 8529700 YP_003258725.1 CDS Pecwa_1312 NC_013421.1 1428337 1429569 R Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtA complement(1428337..1429569) Pectobacterium wasabiae WPP163 8529701 YP_003258726.1 CDS Pecwa_1313 NC_013421.1 1429938 1431134 R TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: eca:ECA3183 nucleoside permease; nucleoside transporter complement(1429938..1431134) Pectobacterium wasabiae WPP163 8529702 YP_003258727.1 CDS Pecwa_1314 NC_013421.1 1431392 1432357 D PFAM: aldo/keto reductase; KEGG: eca:ECA3182 oxidoreductase; aldo/keto reductase 1431392..1432357 Pectobacterium wasabiae WPP163 8529703 YP_003258728.1 CDS Pecwa_1315 NC_013421.1 1432428 1434185 D component of the membrane-bound D-lactate oxidase FAD-binding, NADH independent; D-lactate dehydrogenase 1432428..1434185 Pectobacterium wasabiae WPP163 8529704 YP_003258729.1 CDS Pecwa_1317 NC_013421.1 1434813 1436873 R PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: eca:ECA3179 beta-galactosidase; beta-galactosidase complement(1434813..1436873) Pectobacterium wasabiae WPP163 8529706 YP_003258730.1 CDS Pecwa_1318 NC_013421.1 1436914 1438131 R PFAM: glycosyl hydrolase 53 domain protein; KEGG: eca:ECA3178 arabinogalactan endo-1,4-beta-galactosidase; arabinogalactan endo-1,4-beta-galactosidase complement(1436914..1438131) Pectobacterium wasabiae WPP163 8529707 YP_003258731.1 CDS Pecwa_1319 NC_013421.1 1438167 1439015 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3177 maltose/maltodextrin transport permease protein; binding-protein-dependent transporters inner membrane component complement(1438167..1439015) Pectobacterium wasabiae WPP163 8529708 YP_003258732.1 CDS Pecwa_1320 NC_013421.1 1439028 1440332 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3176 maltose transporter permease protein; binding-protein-dependent transporters inner membrane component complement(1439028..1440332) Pectobacterium wasabiae WPP163 8529709 YP_003258733.1 CDS Pecwa_1321 NC_013421.1 1440433 1441665 R PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA3175 maltose-binding periplasmic protein; extracellular solute-binding protein complement(1440433..1441665) Pectobacterium wasabiae WPP163 8529710 YP_003258734.1 CDS Pecwa_1322 NC_013421.1 1442158 1443240 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: pct:PC1_2957 ABC transporter; ABC transporter 1442158..1443240 Pectobacterium wasabiae WPP163 8529711 YP_003258735.1 CDS lamB NC_013421.1 1443734 1445041 R porin involved in the transport of maltose and maltodextrins; maltoporin complement(1443734..1445041) Pectobacterium wasabiae WPP163 8529712 YP_003258736.1 CDS Pecwa_1324 NC_013421.1 1445527 1446537 R controls transcription of galETKM; GalR family transcriptional regulator complement(1445527..1446537) Pectobacterium wasabiae WPP163 8529713 YP_003258737.1 CDS Pecwa_1325 NC_013421.1 1447002 1448042 D catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 1447002..1448042 Pectobacterium wasabiae WPP163 8529714 YP_003258738.1 CDS Pecwa_1326 NC_013421.1 1448052 1449215 D catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 1448052..1449215 Pectobacterium wasabiae WPP163 8529715 YP_003258739.1 CDS Pecwa_1327 NC_013421.1 1449279 1450757 R TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; KEGG: eca:ECA3169 magnesium transporter; magnesium transporter complement(1449279..1450757) Pectobacterium wasabiae WPP163 8529716 YP_003258740.1 CDS Pecwa_1328 NC_013421.1 1450977 1451426 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pct:PC1_2950 MarR family transcriptional regulator; MarR family transcriptional regulator 1450977..1451426 Pectobacterium wasabiae WPP163 8529717 YP_003258741.1 CDS Pecwa_1329 NC_013421.1 1451585 1452010 D TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein; KEGG: eca:ECA3167 organic hydroperoxide resistance protein; Ohr subfamily peroxiredoxin 1451585..1452010 Pectobacterium wasabiae WPP163 8529718 YP_003258742.1 CDS Pecwa_1330 NC_013421.1 1452203 1452418 R KEGG: pct:PC1_2948 hypothetical protein; hypothetical protein complement(1452203..1452418) Pectobacterium wasabiae WPP163 8529719 YP_003258743.1 CDS Pecwa_1331 NC_013421.1 1452653 1452841 R KEGG: pct:PC1_2947 hypothetical protein; hypothetical protein complement(1452653..1452841) Pectobacterium wasabiae WPP163 8529720 YP_003258744.1 CDS Pecwa_1332 NC_013421.1 1453073 1454608 R PFAM: Ppx/GppA phosphatase; KEGG: eca:ECA3165 exopolyphosphatase; exopolyphosphatase complement(1453073..1454608) Pectobacterium wasabiae WPP163 8529721 YP_003258745.1 CDS Pecwa_1333 NC_013421.1 1454608 1456680 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(1454608..1456680) Pectobacterium wasabiae WPP163 8529722 YP_003258746.1 CDS Pecwa_1334 NC_013421.1 1456898 1459066 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3163 phosphate ABC transporter permease protein; binding-protein-dependent transporters inner membrane component 1456898..1459066 Pectobacterium wasabiae WPP163 8529723 YP_003258747.1 CDS Pecwa_1335 NC_013421.1 1459063 1460709 D TIGRFAM: phosphate ABC transporter inner membrane protein PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_2943 phosphate ABC transporter inner membrane protein PstA; phosphate ABC transporter permease 1459063..1460709 Pectobacterium wasabiae WPP163 8529724 YP_003258748.1 CDS Pecwa_1336 NC_013421.1 1460725 1461540 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 1460725..1461540 Pectobacterium wasabiae WPP163 8529725 YP_003258749.1 CDS Pecwa_1337 NC_013421.1 1461537 1461998 R KEGG: rpa:RPA2267 hypothetical protein; hypothetical protein complement(1461537..1461998) Pectobacterium wasabiae WPP163 8529726 YP_003258750.1 CDS Pecwa_1338 NC_013421.1 1462371 1462808 D PFAM: hypothetical protein; KEGG: eca:ECA3160 transcriptional regulator; hypothetical protein 1462371..1462808 Pectobacterium wasabiae WPP163 8529727 YP_003258751.1 CDS Pecwa_1339 NC_013421.1 1462980 1464269 R TIGRFAM: serine transporter; PFAM: Spore germination protein; Amino acid transporter transmembrane; KEGG: pct:PC1_2939 serine transporter; serine transporter complement(1462980..1464269) Pectobacterium wasabiae WPP163 8529728 YP_003258752.1 CDS Pecwa_1340 NC_013421.1 1464932 1466002 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(1464932..1466002) Pectobacterium wasabiae WPP163 8529729 YP_003258753.1 CDS Pecwa_1341 NC_013421.1 1465999 1466508 R KEGG: pct:PC1_2937 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(1465999..1466508) Pectobacterium wasabiae WPP163 8529730 YP_003258754.1 CDS Pecwa_1342 NC_013421.1 1466940 1467662 R catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase complement(1466940..1467662) Pectobacterium wasabiae WPP163 8529731 YP_003258755.1 CDS Pecwa_1343 NC_013421.1 1467673 1468167 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: pct:PC1_2935 peptidyl-prolyl cis-trans isomerase cyclophilin type; peptidyl-prolyl cis-trans isomerase B complement(1467673..1468167) Pectobacterium wasabiae WPP163 8529732 YP_003258756.1 CDS Pecwa_1344 NC_013421.1 1468589 1469020 D PFAM: DoxX family protein; KEGG: pct:PC1_2934 DoxX family protein; DoxX family protein 1468589..1469020 Pectobacterium wasabiae WPP163 8529733 YP_003258757.1 CDS cysS NC_013421.1 1469291 1470676 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1469291..1470676 Pectobacterium wasabiae WPP163 8529734 YP_003258758.1 CDS Pecwa_1346 NC_013421.1 1470769 1470981 R KEGG: eca:ECA3150 hypothetical protein; hypothetical protein complement(1470769..1470981) Pectobacterium wasabiae WPP163 8529735 YP_003258759.1 CDS Pecwa_1347 NC_013421.1 1471217 1472080 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(1471217..1472080) Pectobacterium wasabiae WPP163 8529736 YP_003258760.1 CDS Pecwa_1348 NC_013421.1 1472187 1473734 R KEGG: pct:PC1_2930 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1472187..1473734) Pectobacterium wasabiae WPP163 8529737 YP_003258761.1 CDS Pecwa_1349 NC_013421.1 1474199 1475365 D KEGG: pct:PC1_2929 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 1474199..1475365 Pectobacterium wasabiae WPP163 8529738 YP_003258762.1 CDS Pecwa_1350 NC_013421.1 1475599 1476747 D catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1475599..1476747 Pectobacterium wasabiae WPP163 8529739 YP_003258763.1 CDS Pecwa_1351 NC_013421.1 1476740 1477723 D catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 1476740..1477723 Pectobacterium wasabiae WPP163 8529740 YP_003258764.1 CDS Pecwa_1352 NC_013421.1 1477720 1479741 D Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 1477720..1479741 Pectobacterium wasabiae WPP163 8529741 YP_003258765.1 CDS Pecwa_1353 NC_013421.1 1479738 1480631 D PFAM: polysaccharide deacetylase; KEGG: eca:ECA3143 hypothetical protein; polysaccharide deacetylase 1479738..1480631 Pectobacterium wasabiae WPP163 8529742 YP_003258766.1 CDS arnT NC_013421.1 1480649 1482319 D catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase 1480649..1482319 Pectobacterium wasabiae WPP163 8529743 YP_003258767.1 CDS Pecwa_1355 NC_013421.1 1482316 1482657 D PFAM: small multidrug resistance protein; KEGG: eca:ECA3141 hypothetical protein; small multidrug resistance protein 1482316..1482657 Pectobacterium wasabiae WPP163 8529744 YP_003258768.1 CDS Pecwa_1356 NC_013421.1 1482657 1483049 D KEGG: eca:ECA3140 hypothetical protein; hypothetical protein 1482657..1483049 Pectobacterium wasabiae WPP163 8529745 YP_003258769.1 CDS Pecwa_1357 NC_013421.1 1483080 1484120 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: eca:ECA3139 iron(III)-transport ATP-binding protein; ABC transporter complement(1483080..1484120) Pectobacterium wasabiae WPP163 8529746 YP_003258770.1 CDS Pecwa_1358 NC_013421.1 1484123 1485700 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3138 iron(III)-transporter permease protein; binding-protein-dependent transporters inner membrane component complement(1484123..1485700) Pectobacterium wasabiae WPP163 8529747 YP_003258771.1 CDS Pecwa_1359 NC_013421.1 1485841 1486857 R PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_2919 extracellular solute-binding protein family 1; extracellular solute-binding protein complement(1485841..1486857) Pectobacterium wasabiae WPP163 8529748 YP_003258772.1 CDS Pecwa_1360 NC_013421.1 1487215 1488108 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3134 LysR family transcriptional regulator; LysR family transcriptional regulator 1487215..1488108 Pectobacterium wasabiae WPP163 8529749 YP_003258773.1 CDS Pecwa_1361 NC_013421.1 1488383 1488583 R KEGG: eca:ECA3132 lipoprotein; lipoprotein complement(1488383..1488583) Pectobacterium wasabiae WPP163 8529750 YP_003258774.1 CDS Pecwa_1362 NC_013421.1 1488931 1490067 D KEGG: eca:ECA3130 poly(glycerophosphate chain) D-alanine transfer protein; poly(glycerophosphate chain) D-alanine transfer protein 1488931..1490067 Pectobacterium wasabiae WPP163 8529751 YP_003258775.1 CDS Pecwa_1363 NC_013421.1 1490064 1490186 D KEGG: pct:PC1_2912 hypothetical protein; hypothetical protein 1490064..1490186 Pectobacterium wasabiae WPP163 8529752 YP_003258776.1 CDS Pecwa_1364 NC_013421.1 1490197 1491315 D PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: eca:ECA3129 peptidoglycan biosynthesis protein; membrane bound O-acyl transferase MBOAT family protein 1490197..1491315 Pectobacterium wasabiae WPP163 8529753 YP_003258777.1 CDS Pecwa_1365 NC_013421.1 1491312 1492745 D PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA3128 D-alanine--poly(phosphoribitol) ligase subunit 1; AMP-dependent synthetase and ligase 1491312..1492745 Pectobacterium wasabiae WPP163 8529754 YP_003258778.1 CDS Pecwa_1366 NC_013421.1 1492763 1492984 D KEGG: pct:PC1_2909 acyl carrier protein; acyl carrier protein 1492763..1492984 Pectobacterium wasabiae WPP163 8529755 YP_003258779.1 CDS Pecwa_1367 NC_013421.1 1493085 1494116 R catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(1493085..1494116) Pectobacterium wasabiae WPP163 8529756 YP_003258780.1 CDS Pecwa_1368 NC_013421.1 1494144 1495121 R PFAM: Domain of unknown function DUF1852; KEGG: eca:ECA3125 hypothetical protein; hypothetical protein complement(1494144..1495121) Pectobacterium wasabiae WPP163 8529757 YP_003258781.1 CDS Pecwa_1370 NC_013421.1 1496023 1496448 D PFAM: NUDIX hydrolase; KEGG: pen:PSEEN1183 hydrolase, MutT/NUDIX family protein; NUDIX hydrolase 1496023..1496448 Pectobacterium wasabiae WPP163 8529759 YP_003258782.1 CDS Pecwa_1371 NC_013421.1 1496521 1497090 D PFAM: regulatory protein TetR; KEGG: pct:PC1_2715 TetR family transcriptional regulator; TetR family transcriptional regulator 1496521..1497090 Pectobacterium wasabiae WPP163 8529760 YP_003258783.1 CDS Pecwa_1374 NC_013421.1 1498287 1498577 R PFAM: transposase IS3/IS911 family protein; KEGG: har:HEAR2248 transposase; transposase IS3/IS911 family protein complement(1498287..1498577) Pectobacterium wasabiae WPP163 8529763 YP_003258784.1 CDS Pecwa_1376 NC_013421.1 1499146 1499784 R KEGG: csa:Csal_2377 hypothetical protein; hypothetical protein complement(1499146..1499784) Pectobacterium wasabiae WPP163 8529765 YP_003258785.1 CDS Pecwa_1377 NC_013421.1 1500215 1501429 R PFAM: integrase; KEGG: pct:PC1_2870 integrase; integrase complement(1500215..1501429) Pectobacterium wasabiae WPP163 8529766 YP_003258786.1 CDS Pecwa_1379 NC_013421.1 1501989 1502084 R KEGG: pct:PC1_2892 hypothetical protein; hypothetical protein complement(1501989..1502084) Pectobacterium wasabiae WPP163 8529768 YP_003258787.1 CDS Pecwa_1380 NC_013421.1 1502142 1502975 R KEGG: eca:ECA2852 hypothetical protein; hypothetical protein complement(1502142..1502975) Pectobacterium wasabiae WPP163 8529769 YP_003258788.1 CDS Pecwa_1381 NC_013421.1 1503093 1503413 R PFAM: protein of unknown function DUF1219; KEGG: eca:ECA2853 hypothetical protein; hypothetical protein complement(1503093..1503413) Pectobacterium wasabiae WPP163 8529770 YP_003258789.1 CDS Pecwa_1382 NC_013421.1 1503483 1503818 R PFAM: YagBYeeUYfjZ family protein; KEGG: eca:ECA2854 hypothetical protein; YagBYeeUYfjZ family protein complement(1503483..1503818) Pectobacterium wasabiae WPP163 8529771 YP_003258790.1 CDS Pecwa_1383 NC_013421.1 1503858 1504331 R TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: eca:ECA2855 hypothetical protein; DNA repair protein RadC complement(1503858..1504331) Pectobacterium wasabiae WPP163 8529772 YP_003258791.1 CDS Pecwa_1384 NC_013421.1 1504416 1504649 R KEGG: pct:PC1_2887 CP4-57 prophage; inner membrane protein; CP4-57 prophage; inner membrane protein complement(1504416..1504649) Pectobacterium wasabiae WPP163 8529773 YP_003258792.1 CDS Pecwa_1385 NC_013421.1 1504667 1505140 R KEGG: pct:PC1_2886 hypothetical protein; hypothetical protein complement(1504667..1505140) Pectobacterium wasabiae WPP163 8529774 YP_003258793.1 CDS Pecwa_1386 NC_013421.1 1505176 1505745 R KEGG: pct:PC1_2885 hypothetical protein; hypothetical protein complement(1505176..1505745) Pectobacterium wasabiae WPP163 8529775 YP_003258794.1 CDS Pecwa_1387 NC_013421.1 1505927 1506625 R PFAM: regulatory protein DeoR; KEGG: pct:PC1_2884 regulatory protein DeoR; DeoR family transcriptional regulator complement(1505927..1506625) Pectobacterium wasabiae WPP163 8529776 YP_003258795.1 CDS Pecwa_1388 NC_013421.1 1506995 1507870 R PFAM: GTP-binding protein HSR1-related; KEGG: pct:PC1_2882 GTP-binding protein HSR1-related; GTP-binding protein HSR1-like protein complement(1506995..1507870) Pectobacterium wasabiae WPP163 8529777 YP_003258796.1 CDS Pecwa_1389 NC_013421.1 1507973 1508878 R KEGG: hypothetical protein; hypothetical protein complement(1507973..1508878) Pectobacterium wasabiae WPP163 8529778 YP_003258797.1 CDS Pecwa_1390 NC_013421.1 1509276 1509488 D PFAM: prophage CP4-57 regulator; KEGG: pct:PC1_2878 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA 1509276..1509488 Pectobacterium wasabiae WPP163 8529779 YP_003258798.1 CDS Pecwa_1391 NC_013421.1 1509594 1510127 D KEGG: ypi:YpsIP31758_0767 hypothetical protein; hypothetical protein 1509594..1510127 Pectobacterium wasabiae WPP163 8529780 YP_003258799.1 CDS Pecwa_1392 NC_013421.1 1510137 1510514 D KEGG: eca:ECA2864 hypothetical protein; hypothetical protein 1510137..1510514 Pectobacterium wasabiae WPP163 8529781 YP_003258800.1 CDS Pecwa_1393 NC_013421.1 1510898 1511509 D KEGG: ypi:YpsIP31758_0768 hypothetical protein; hypothetical protein 1510898..1511509 Pectobacterium wasabiae WPP163 8529782 YP_003258801.1 CDS Pecwa_1395 NC_013421.1 1512186 1512425 D KEGG: rme:Rmet_1474 hypothetical protein; hypothetical protein 1512186..1512425 Pectobacterium wasabiae WPP163 8529784 YP_003258802.1 CDS Pecwa_1396 NC_013421.1 1512476 1512766 D PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: bpy:Bphyt_7274 transcriptional regulator, XRE family; XRE family transcriptional regulator 1512476..1512766 Pectobacterium wasabiae WPP163 8529785 YP_003258803.1 CDS Pecwa_1397 NC_013421.1 1512747 1513718 D KEGG: rme:Rmet_1473 retron reverse transcriptase; retron reverse transcriptase 1512747..1513718 Pectobacterium wasabiae WPP163 8529786 YP_003258804.1 CDS Pecwa_1398 NC_013421.1 1513908 1514267 R KEGG: vei:Veis_3745 hypothetical protein; hypothetical protein complement(1513908..1514267) Pectobacterium wasabiae WPP163 8529787 YP_003258805.1 CDS Pecwa_1399 NC_013421.1 1514271 1515668 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: vei:Veis_3744 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(1514271..1515668) Pectobacterium wasabiae WPP163 8529788 YP_003258806.1 CDS Pecwa_1400 NC_013421.1 1515670 1516536 R KEGG: pna:Pnap_2447 hypothetical protein; hypothetical protein complement(1515670..1516536) Pectobacterium wasabiae WPP163 8529789 YP_003258807.1 CDS Pecwa_1401 NC_013421.1 1516732 1517214 R KEGG: shw:Sputw3181_3992 hypothetical protein; hypothetical protein complement(1516732..1517214) Pectobacterium wasabiae WPP163 8529790 YP_003258808.1 CDS Pecwa_1402 NC_013421.1 1517317 1518405 R PFAM: ATP-binding region ATPase domain protein; KEGG: shm:Shewmr7_1788 ATP-binding region, ATPase-like protein; ATP-binding region ATPase domain-containing protein complement(1517317..1518405) Pectobacterium wasabiae WPP163 8529791 YP_003258809.1 CDS Pecwa_1403 NC_013421.1 1519062 1520276 R PFAM: integrase; KEGG: pct:PC1_2870 integrase; integrase complement(1519062..1520276) Pectobacterium wasabiae WPP163 8529792 YP_003258810.1 CDS Pecwa_1404 NC_013421.1 1520963 1523416 D PFAM: MscS Mechanosensitive ion channel; KEGG: eca:ECA3118 mechanosensitive ion channel protein; mechanosensitive ion channel MscS 1520963..1523416 Pectobacterium wasabiae WPP163 8529794 YP_003258811.1 CDS Pecwa_1405 NC_013421.1 1523573 1524433 R PFAM: aminotransferase class IV; KEGG: eca:ECA3117 D-alanine aminotransferase; class IV aminotransferase complement(1523573..1524433) Pectobacterium wasabiae WPP163 8529795 YP_003258812.1 CDS Pecwa_1406 NC_013421.1 1524476 1525456 R PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA3116 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein complement(1524476..1525456) Pectobacterium wasabiae WPP163 8529796 YP_003258813.1 CDS Pecwa_1407 NC_013421.1 1525838 1527079 D PFAM: aminotransferase class I and II; KEGG: pct:PC1_2866 aminotransferase class I and II; aminotransferase 1525838..1527079 Pectobacterium wasabiae WPP163 8529797 YP_003258814.1 CDS Pecwa_1408 NC_013421.1 1527188 1527601 D TIGRFAM: lipoprotein, PulS/OutS family; PFAM: Chaperone lipoprotein, PulS/OutS; KEGG: eca:ECA3114 general secretion pathway lipoprotein; lipoprotein, PulS/OutS family 1527188..1527601 Pectobacterium wasabiae WPP163 8529798 YP_003258815.1 CDS Pecwa_1409 NC_013421.1 1527598 1528161 R KEGG: eca:ECA3113 general secretion pathway protein; general secretion pathway protein complement(1527598..1528161) Pectobacterium wasabiae WPP163 8529799 YP_003258816.1 CDS Pecwa_1410 NC_013421.1 1528914 1530893 D PFAM: Fibronectin type III domain protein; glycoside hydrolase family 28; SMART: Fibronectin type III domain protein; KEGG: eca:ECA3111 exo-poly-alpha-D-galacturonosidase; fibronectin type III domain-containing protein 1528914..1530893 Pectobacterium wasabiae WPP163 8529800 YP_003258817.1 CDS Pecwa_1411 NC_013421.1 1530930 1531802 D TIGRFAM: general secretion pathway protein C; KEGG: pct:PC1_2861 general secretion pathway protein C; general secretion pathway protein C 1530930..1531802 Pectobacterium wasabiae WPP163 8529801 YP_003258818.1 CDS Pecwa_1412 NC_013421.1 1531921 1533843 D TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: eca:ECA3109 general secretion pathway protein D; general secretion pathway protein D 1531921..1533843 Pectobacterium wasabiae WPP163 8529802 YP_003258819.1 CDS Pecwa_1413 NC_013421.1 1533840 1535336 D KEGG: eca:ECA3108 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA; general secretory pathway protein E 1533840..1535336 Pectobacterium wasabiae WPP163 8529803 YP_003258820.1 CDS Pecwa_1414 NC_013421.1 1535338 1536564 D TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system F domain; KEGG: eca:ECA3107 general secretion pathway protein F; general secretion pathway protein F 1535338..1536564 Pectobacterium wasabiae WPP163 8529804 YP_003258821.1 CDS Pecwa_1415 NC_013421.1 1536597 1537037 D TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: eca:ECA3106 general secretion pathway protein G; general secretion pathway protein G 1536597..1537037 Pectobacterium wasabiae WPP163 8529805 YP_003258822.1 CDS Pecwa_1416 NC_013421.1 1537137 1537703 D TIGRFAM: general secretion pathway protein H; KEGG: eca:ECA3105 general secretion pathway protein H; general secretion pathway protein H 1537137..1537703 Pectobacterium wasabiae WPP163 8529806 YP_003258823.1 CDS Pecwa_1417 NC_013421.1 1537700 1538065 D TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: pct:PC1_2855 general secretion pathway protein I; general secretion pathway protein I 1537700..1538065 Pectobacterium wasabiae WPP163 8529807 YP_003258824.1 CDS Pecwa_1418 NC_013421.1 1538065 1538715 D TIGRFAM: general secretion pathway protein J; KEGG: eca:ECA3103 general secretion pathway protein J; general secretion pathway protein J 1538065..1538715 Pectobacterium wasabiae WPP163 8529808 YP_003258825.1 CDS Pecwa_1419 NC_013421.1 1538712 1539698 D PFAM: general secretion pathway protein K; KEGG: eca:ECA3102 general secretion pathway protein K; general secretion pathway protein K 1538712..1539698 Pectobacterium wasabiae WPP163 8529809 YP_003258826.1 CDS Pecwa_1420 NC_013421.1 1539695 1540972 D TIGRFAM: general secretion pathway protein L; PFAM: general secretion pathway L; KEGG: pct:PC1_2852 general secretion pathway protein L; general secretion pathway protein L 1539695..1540972 Pectobacterium wasabiae WPP163 8529810 YP_003258827.1 CDS Pecwa_1421 NC_013421.1 1540969 1541463 D PFAM: general secretion pathway protein M; KEGG: eca:ECA3100 general secretion pathway protein M; general secretion pathway protein M 1540969..1541463 Pectobacterium wasabiae WPP163 8529811 YP_003258828.1 CDS Pecwa_1422 NC_013421.1 1541527 1542375 D PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: eca:ECA3098 type 4 prepilin-like proteins leader peptide processing enzyme; prepilin peptidase 1541527..1542375 Pectobacterium wasabiae WPP163 8529812 YP_003258829.1 CDS Pecwa_1423 NC_013421.1 1542948 1543973 R PFAM: Luciferase-like, subgroup; KEGG: eca:ECA3097 monooxygenase; luciferase-like protein complement(1542948..1543973) Pectobacterium wasabiae WPP163 8529813 YP_003258830.1 CDS Pecwa_1424 NC_013421.1 1544325 1545389 D PFAM: periplasmic binding protein; KEGG: eca:ECA3096 ABC-transporter periplasmic-binding component; periplasmic binding protein 1544325..1545389 Pectobacterium wasabiae WPP163 8529814 YP_003258831.1 CDS Pecwa_1425 NC_013421.1 1545386 1546405 D PFAM: transporter permease; KEGG: eca:ECA3095 ABC transporter permease; transporter permease 1545386..1546405 Pectobacterium wasabiae WPP163 8529815 YP_003258832.1 CDS Pecwa_1426 NC_013421.1 1546407 1547177 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3094 ABC transporter ATP-binding protein; ABC transporter 1546407..1547177 Pectobacterium wasabiae WPP163 8529816 YP_003258833.1 CDS Pecwa_1427 NC_013421.1 1547174 1547908 D KEGG: eca:ECA3093 molybdate ABC transporter periplasmic molybdate-binding protein; molybdate ABC transporter periplasmic molybdate-binding protein 1547174..1547908 Pectobacterium wasabiae WPP163 8529817 YP_003258834.1 CDS Pecwa_1428 NC_013421.1 1547938 1549410 D exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 1547938..1549410 Pectobacterium wasabiae WPP163 8529818 YP_003258835.1 CDS Pecwa_1429 NC_013421.1 1549462 1550049 D PFAM: protein of unknown function DUF1234; KEGG: pct:PC1_2842 hypothetical protein; hypothetical protein 1549462..1550049 Pectobacterium wasabiae WPP163 8529819 YP_003258836.1 CDS Pecwa_1430 NC_013421.1 1550141 1550671 R KEGG: eca:ECA3090 hypothetical protein; hypothetical protein complement(1550141..1550671) Pectobacterium wasabiae WPP163 8529820 YP_003258837.1 CDS Pecwa_1431 NC_013421.1 1551197 1551463 D KEGG: pct:PC1_2840 hypothetical protein; hypothetical protein 1551197..1551463 Pectobacterium wasabiae WPP163 8529821 YP_003258838.1 CDS Pecwa_1432 NC_013421.1 1551592 1552353 D KEGG: eca:ECA3088 hypothetical protein; hypothetical protein 1551592..1552353 Pectobacterium wasabiae WPP163 8529822 YP_003258839.1 CDS Pecwa_1433 NC_013421.1 1552666 1553457 D PFAM: Necrosis inducing; KEGG: pct:PC1_2838 Necrosis inducing protein; hypothetical protein 1552666..1553457 Pectobacterium wasabiae WPP163 8529823 YP_003258840.1 CDS Pecwa_1434 NC_013421.1 1553714 1554517 R KEGG: pct:PC1_2835 hypothetical protein; hypothetical protein complement(1553714..1554517) Pectobacterium wasabiae WPP163 8529824 YP_003258841.1 CDS Pecwa_1435 NC_013421.1 1554514 1555311 R KEGG: pct:PC1_2834 hypothetical protein; hypothetical protein complement(1554514..1555311) Pectobacterium wasabiae WPP163 8529825 YP_003258842.1 CDS Pecwa_1436 NC_013421.1 1555334 1555954 R KEGG: pct:PC1_2833 hypothetical protein; hypothetical protein complement(1555334..1555954) Pectobacterium wasabiae WPP163 8529826 YP_003258843.1 CDS Pecwa_1437 NC_013421.1 1557073 1557834 D PFAM: VacJ family lipoprotein; KEGG: eca:ECA3083 lipoprotein; VacJ family lipoprotein 1557073..1557834 Pectobacterium wasabiae WPP163 8529828 YP_003258844.1 CDS Pecwa_1438 NC_013421.1 1558216 1559799 D malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 1558216..1559799 Pectobacterium wasabiae WPP163 8529829 YP_003258845.1 CDS Pecwa_1439 NC_013421.1 1559979 1560881 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_5638 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1559979..1560881) Pectobacterium wasabiae WPP163 8529830 YP_003258846.1 CDS Pecwa_1440 NC_013421.1 1561024 1561776 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_3531 short chain dehydrogenase; short chain dehydrogenase 1561024..1561776 Pectobacterium wasabiae WPP163 8529831 YP_003258847.1 CDS Pecwa_1441 NC_013421.1 1561999 1563246 R PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: eca:ECA3081 long-chain fatty acid outer membrane transporter; long-chain fatty acid outer membrane transporter complement(1561999..1563246) Pectobacterium wasabiae WPP163 8529832 YP_003258848.1 CDS Pecwa_1442 NC_013421.1 1563628 1563924 D PFAM: conserved hypothetical protein; KEGG: pct:PC1_2823 hypothetical protein; hypothetical protein 1563628..1563924 Pectobacterium wasabiae WPP163 8529833 YP_003258849.1 CDS fadI NC_013421.1 1564170 1565483 D FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 1564170..1565483 Pectobacterium wasabiae WPP163 8529834 YP_003258850.1 CDS fadJ NC_013421.1 1565480 1567663 D multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha 1565480..1567663 Pectobacterium wasabiae WPP163 8529835 YP_003258851.1 CDS Pecwa_1445 NC_013421.1 1567656 1568669 R PFAM: Spore coat U domain protein; KEGG: eca:ECA3077 hypothetical protein; Spore coat U domain-containing protein complement(1567656..1568669) Pectobacterium wasabiae WPP163 8529836 YP_003258852.1 CDS Pecwa_1446 NC_013421.1 1568674 1571043 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eca:ECA3076 fimbrial usher protein; fimbrial biogenesis outer membrane usher protein complement(1568674..1571043) Pectobacterium wasabiae WPP163 8529837 YP_003258853.1 CDS Pecwa_1447 NC_013421.1 1571102 1571884 R KEGG: eca:ECA3075 fimbrial chaperone; fimbrial chaperone complement(1571102..1571884) Pectobacterium wasabiae WPP163 8529838 YP_003258854.1 CDS Pecwa_1448 NC_013421.1 1571908 1572444 R PFAM: Spore coat U domain protein; KEGG: eca:ECA3074 hypothetical protein; Spore coat U domain-containing protein complement(1571908..1572444) Pectobacterium wasabiae WPP163 8529839 YP_003258855.1 CDS Pecwa_1449 NC_013421.1 1572621 1573169 R PFAM: Spore coat U domain protein; KEGG: eca:ECA3073 hypothetical protein; Spore coat U domain-containing protein complement(1572621..1573169) Pectobacterium wasabiae WPP163 8529840 YP_003258856.1 CDS Pecwa_1450 NC_013421.1 1574109 1574591 D TIGRFAM: phosphohistidine phosphatase SixA; PFAM: phosphoglycerate mutase; KEGG: pct:PC1_2814 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase 1574109..1574591 Pectobacterium wasabiae WPP163 8529841 YP_003258857.1 CDS Pecwa_1451 NC_013421.1 1574690 1575232 R PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: pct:PC1_2813 Smr protein/MutS2; hypothetical protein complement(1574690..1575232) Pectobacterium wasabiae WPP163 8529842 YP_003258858.1 CDS Pecwa_1452 NC_013421.1 1575404 1576336 D involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1575404..1576336 Pectobacterium wasabiae WPP163 8529843 YP_003258859.1 CDS Pecwa_1453 NC_013421.1 1576411 1577496 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1576411..1577496 Pectobacterium wasabiae WPP163 8529844 YP_003258860.1 CDS mepA NC_013421.1 1577502 1578347 D D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 1577502..1578347 Pectobacterium wasabiae WPP163 8529845 YP_003258861.1 CDS Pecwa_1455 NC_013421.1 1578357 1579157 D PFAM: protein of unknown function DUF81; KEGG: eca:ECA3067 hypothetical protein; hypothetical protein 1578357..1579157 Pectobacterium wasabiae WPP163 8529846 YP_003258862.1 CDS Pecwa_1456 NC_013421.1 1579168 1579731 D PFAM: protein of unknown function DUF462; KEGG: pct:PC1_2808 hypothetical protein; hypothetical protein 1579168..1579731 Pectobacterium wasabiae WPP163 8529847 YP_003258863.1 CDS Pecwa_1457 NC_013421.1 1579766 1580050 D PFAM: YfcL protein; KEGG: pct:PC1_2807 YfcL protein; hypothetical protein 1579766..1580050 Pectobacterium wasabiae WPP163 8529848 YP_003258864.1 CDS mnmC NC_013421.1 1580117 1582144 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(1580117..1582144) Pectobacterium wasabiae WPP163 8529849 YP_003258865.1 CDS Pecwa_1459 NC_013421.1 1582317 1583534 D FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1582317..1583534 Pectobacterium wasabiae WPP163 8529850 YP_003258866.1 CDS Pecwa_1460 NC_013421.1 1583639 1584565 R PFAM: alpha/beta hydrolase; KEGG: kpn:KPN_04184 acetyl esterase; alpha/beta hydrolase complement(1583639..1584565) Pectobacterium wasabiae WPP163 8529851 YP_003258867.1 CDS flk NC_013421.1 1584664 1585929 R in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator complement(1584664..1585929) Pectobacterium wasabiae WPP163 8529852 YP_003258868.1 CDS Pecwa_1462 NC_013421.1 1586016 1587017 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: pct:PC1_2803 hypothetical protein; hypothetical protein complement(1586016..1587017) Pectobacterium wasabiae WPP163 8529853 YP_003258869.1 CDS Pecwa_1463 NC_013421.1 1587210 1588346 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pct:PC1_2802 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region 1587210..1588346 Pectobacterium wasabiae WPP163 8529854 YP_003258870.1 CDS Pecwa_1464 NC_013421.1 1588477 1589487 D PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding; KEGG: eca:ECA3059 semialdehyde dehydrogenase; semialdehyde dehydrogenase 1588477..1589487 Pectobacterium wasabiae WPP163 8529855 YP_003258871.1 CDS truA NC_013421.1 1589487 1590338 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1589487..1590338 Pectobacterium wasabiae WPP163 8529856 YP_003258872.1 CDS Pecwa_1466 NC_013421.1 1590530 1591195 D PFAM: SNARE associated Golgi protein; KEGG: pct:PC1_2799 SNARE associated Golgi protein; hypothetical protein 1590530..1591195 Pectobacterium wasabiae WPP163 8529857 YP_003258873.1 CDS Pecwa_1467 NC_013421.1 1591420 1592337 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1591420..1592337 Pectobacterium wasabiae WPP163 8529858 YP_003258874.1 CDS Pecwa_1468 NC_013421.1 1592443 1593711 D KEGG: eca:ECA3055 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1592443..1593711 Pectobacterium wasabiae WPP163 8529859 YP_003258875.1 CDS Pecwa_1469 NC_013421.1 1593701 1594453 D PFAM: sporulation domain protein; KEGG: pct:PC1_2796 sporulation domain protein; hypothetical protein 1593701..1594453 Pectobacterium wasabiae WPP163 8529860 YP_003258876.1 CDS Pecwa_1470 NC_013421.1 1594628 1595128 D membrane protein required for colicin V production; colicin V production protein 1594628..1595128 Pectobacterium wasabiae WPP163 8529861 YP_003258877.1 CDS Pecwa_1471 NC_013421.1 1595150 1596667 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1595150..1596667 Pectobacterium wasabiae WPP163 8529862 YP_003258878.1 CDS Pecwa_1472 NC_013421.1 1596864 1597436 D catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1596864..1597436 Pectobacterium wasabiae WPP163 8529863 YP_003258879.1 CDS Pecwa_1473 NC_013421.1 1597851 1598630 D KEGG: eca:ECA3050 histidine-binding periplasmic protein; TIGRFAM: cationic amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic protein 1597851..1598630 Pectobacterium wasabiae WPP163 8529864 YP_003258880.1 CDS Pecwa_1474 NC_013421.1 1598778 1599467 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3049 histidine ABC transporter permease; polar amino acid ABC transporter inner membrane protein 1598778..1599467 Pectobacterium wasabiae WPP163 8529865 YP_003258881.1 CDS Pecwa_1475 NC_013421.1 1599460 1600176 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_2788 polar amino acid ABC transporter inner membrane protein; polar amino acid ABC transporter inner membrane protein 1599460..1600176 Pectobacterium wasabiae WPP163 8529866 YP_003258882.1 CDS Pecwa_1476 NC_013421.1 1600191 1600964 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_2787 ABC transporter; histidine/lysine/arginine/ornithine transporter subunit 1600191..1600964 Pectobacterium wasabiae WPP163 8529867 YP_003258883.1 CDS Pecwa_1477 NC_013421.1 1601331 1602236 R PFAM: hypothetical protein; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA3046 hypothetical protein; hypothetical protein complement(1601331..1602236) Pectobacterium wasabiae WPP163 8529868 YP_003258884.1 CDS folX NC_013421.1 1602443 1602829 R catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase complement(1602443..1602829) Pectobacterium wasabiae WPP163 8529869 YP_003258885.1 CDS Pecwa_1479 NC_013421.1 1602953 1603579 R PFAM: glutathione S-transferase domain; KEGG: pct:PC1_2784 glutathione S-transferase; glutathione S-transferase complement(1602953..1603579) Pectobacterium wasabiae WPP163 8529870 YP_003258886.1 CDS Pecwa_1480 NC_013421.1 1603845 1604396 D TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: eca:ECA3043 phosphodiesterase; phosphodiesterase 1603845..1604396 Pectobacterium wasabiae WPP163 8529871 YP_003258887.1 CDS Pecwa_1481 NC_013421.1 1604520 1605170 D PFAM: NUDIX hydrolase; KEGG: eca:ECA3042 NUDIX hydrolase; NUDIX hydrolase 1604520..1605170 Pectobacterium wasabiae WPP163 8529872 YP_003258888.1 CDS Pecwa_1482 NC_013421.1 1605256 1606116 R PFAM: protein of unknown function DUF817; KEGG: eca:ECA3041 hypothetical protein; hypothetical protein complement(1605256..1606116) Pectobacterium wasabiae WPP163 8529873 YP_003258889.1 CDS Pecwa_1483 NC_013421.1 1606509 1608647 R catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase complement(1606509..1608647) Pectobacterium wasabiae WPP163 8529874 YP_003258890.1 CDS Pecwa_1484 NC_013421.1 1608727 1609929 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(1608727..1609929) Pectobacterium wasabiae WPP163 8529875 YP_003258891.1 CDS Pecwa_1485 NC_013421.1 1610371 1610826 D PFAM: protein of unknown function DUF412; KEGG: eca:ECA3038 hypothetical protein; hypothetical protein 1610371..1610826 Pectobacterium wasabiae WPP163 8529876 YP_003258892.1 CDS Pecwa_1486 NC_013421.1 1610992 1611486 D PFAM: YfbU family protein; KEGG: pct:PC1_2778 YfbU family protein; hypothetical protein 1610992..1611486 Pectobacterium wasabiae WPP163 8529877 YP_003258893.1 CDS Pecwa_1487 NC_013421.1 1611490 1612164 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pct:PC1_2777 HAD-superfamily hydrolase, subfamily IA, variant 3; phosphatase 1611490..1612164 Pectobacterium wasabiae WPP163 8529878 YP_003258894.1 CDS Pecwa_1488 NC_013421.1 1612343 1614175 D PFAM: citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: eca:ECA3035 sodium/sulfate transporter; citrate transporter 1612343..1614175 Pectobacterium wasabiae WPP163 8529879 YP_003258895.1 CDS Pecwa_1489 NC_013421.1 1614205 1614804 R KEGG: pct:PC1_2775 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; hypothetical protein complement(1614205..1614804) Pectobacterium wasabiae WPP163 8529880 YP_003258896.1 CDS Pecwa_1490 NC_013421.1 1614947 1616161 R broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT complement(1614947..1616161) Pectobacterium wasabiae WPP163 8529881 YP_003258897.1 CDS Pecwa_1491 NC_013421.1 1616662 1617612 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_2773 LysR family transcriptional regulator; LysR family transcriptional regulator 1616662..1617612 Pectobacterium wasabiae WPP163 8529882 YP_003258898.1 CDS Pecwa_1492 NC_013421.1 1618288 1618728 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1618288..1618728 Pectobacterium wasabiae WPP163 8529883 YP_003258899.1 CDS Pecwa_1493 NC_013421.1 1618746 1619420 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1618746..1619420 Pectobacterium wasabiae WPP163 8529884 YP_003258900.1 CDS Pecwa_1494 NC_013421.1 1619519 1621318 D NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1619519..1621318 Pectobacterium wasabiae WPP163 8529885 YP_003258901.1 CDS Pecwa_1495 NC_013421.1 1621321 1621866 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1621321..1621866 Pectobacterium wasabiae WPP163 8529886 YP_003258902.1 CDS Pecwa_1496 NC_013421.1 1621863 1623212 D shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 1621863..1623212 Pectobacterium wasabiae WPP163 8529887 YP_003258903.1 CDS Pecwa_1497 NC_013421.1 1623400 1626126 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1623400..1626126 Pectobacterium wasabiae WPP163 8529888 YP_003258904.1 CDS Pecwa_1498 NC_013421.1 1626123 1627097 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1626123..1627097 Pectobacterium wasabiae WPP163 8529889 YP_003258905.1 CDS Pecwa_1499 NC_013421.1 1627115 1627657 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1627115..1627657 Pectobacterium wasabiae WPP163 8529890 YP_003258906.1 CDS Pecwa_1500 NC_013421.1 1627667 1628227 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1627667..1628227 Pectobacterium wasabiae WPP163 8529891 YP_003258907.1 CDS Pecwa_1501 NC_013421.1 1628224 1628526 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1628224..1628526 Pectobacterium wasabiae WPP163 8529892 YP_003258908.1 CDS Pecwa_1502 NC_013421.1 1628523 1630373 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1628523..1630373 Pectobacterium wasabiae WPP163 8529893 YP_003258909.1 CDS Pecwa_1503 NC_013421.1 1630474 1632009 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1630474..1632009 Pectobacterium wasabiae WPP163 8529894 YP_003258910.1 CDS Pecwa_1504 NC_013421.1 1632016 1633473 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1632016..1633473 Pectobacterium wasabiae WPP163 8529895 YP_003258911.1 CDS Pecwa_1505 NC_013421.1 1633715 1634026 D PFAM: protein of unknown function DUF883 ElaB; KEGG: pct:PC1_2759 hypothetical protein; hypothetical protein 1633715..1634026 Pectobacterium wasabiae WPP163 8529896 YP_003258912.1 CDS Pecwa_1506 NC_013421.1 1634180 1635865 R KEGG: eca:ECA3014 trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose-6-phosphate hydrolase complement(1634180..1635865) Pectobacterium wasabiae WPP163 8529897 YP_003258913.1 CDS Pecwa_1507 NC_013421.1 1635929 1637347 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunit IIBC complement(1635929..1637347) Pectobacterium wasabiae WPP163 8529898 YP_003258914.1 CDS Pecwa_1508 NC_013421.1 1637528 1638325 R hypothetical protein complement(1637528..1638325) Pectobacterium wasabiae WPP163 8529899 YP_003258915.1 CDS Pecwa_1509 NC_013421.1 1638413 1639576 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3265 major facilitator transporter; major facilitator superfamily protein complement(1638413..1639576) Pectobacterium wasabiae WPP163 8529900 YP_003258916.1 CDS Pecwa_1510 NC_013421.1 1639682 1640488 R hypothetical protein complement(1639682..1640488) Pectobacterium wasabiae WPP163 8529901 YP_003258917.1 CDS Pecwa_1511 NC_013421.1 1640494 1641939 R KEGG: bph:Bphy_7706 coproporphyrinogen dehydrogenase; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; coproporphyrinogen dehydrogenase complement(1640494..1641939) Pectobacterium wasabiae WPP163 8529902 YP_003258918.1 CDS Pecwa_1514 NC_013421.1 1645362 1645460 R KEGG: pct:PC1_2756 hypothetical protein; hypothetical protein complement(1645362..1645460) Pectobacterium wasabiae WPP163 8529904 YP_003258919.1 CDS Pecwa_1515 NC_013421.1 1645666 1646211 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3012 acetyltransferase; N-acetyltransferase GCN5 complement(1645666..1646211) Pectobacterium wasabiae WPP163 8529905 YP_003258920.1 CDS Pecwa_1516 NC_013421.1 1646231 1647127 R TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pct:PC1_2754 phenazine biosynthesis protein PhzF family; phenazine biosynthesis protein PhzF family complement(1646231..1647127) Pectobacterium wasabiae WPP163 8529906 YP_003258921.1 CDS Pecwa_1517 NC_013421.1 1647245 1648837 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3010 ABC transporter ATP-binding protein; ABC transporter 1647245..1648837 Pectobacterium wasabiae WPP163 8529907 YP_003258922.1 CDS Pecwa_1518 NC_013421.1 1648934 1651117 R PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pct:PC1_2751 TonB-dependent receptor plug; TonB-dependent receptor plug complement(1648934..1651117) Pectobacterium wasabiae WPP163 8529908 YP_003258923.1 CDS Pecwa_1519 NC_013421.1 1651525 1652838 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1651525..1652838 Pectobacterium wasabiae WPP163 8529909 YP_003258924.1 CDS Pecwa_1520 NC_013421.1 1652853 1653353 D PFAM: protein of unknown function DUF1008; KEGG: pct:PC1_2749 hypothetical protein; hypothetical protein 1652853..1653353 Pectobacterium wasabiae WPP163 8529910 YP_003258925.1 CDS Pecwa_1521 NC_013421.1 1653350 1653979 D KEGG: pct:PC1_2748 hypothetical protein; hypothetical protein 1653350..1653979 Pectobacterium wasabiae WPP163 8529911 YP_003258926.1 CDS Pecwa_1522 NC_013421.1 1654146 1654637 D PFAM: sigma factor YlaC; KEGG: pct:PC1_2747 hypothetical protein; sigma factor YlaC 1654146..1654637 Pectobacterium wasabiae WPP163 8529912 YP_003258927.1 CDS Pecwa_1523 NC_013421.1 1654859 1655581 D Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 1654859..1655581 Pectobacterium wasabiae WPP163 8529913 YP_003258928.1 CDS Pecwa_1524 NC_013421.1 1655690 1657141 D PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pct:PC1_2744 GntR family transcriptional regulator; GntR family transcriptional regulator 1655690..1657141 Pectobacterium wasabiae WPP163 8529914 YP_003258929.1 CDS Pecwa_1525 NC_013421.1 1657386 1658315 D required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE 1657386..1658315 Pectobacterium wasabiae WPP163 8529915 YP_003258930.1 CDS Pecwa_1526 NC_013421.1 1658369 1658695 R KEGG: eca:ECA3001 hypothetical protein; hypothetical protein complement(1658369..1658695) Pectobacterium wasabiae WPP163 8529916 YP_003258931.1 CDS Pecwa_1527 NC_013421.1 1658699 1659064 R PFAM: protein of unknown function DUF202; KEGG: pct:PC1_2741 hypothetical protein; hypothetical protein complement(1658699..1659064) Pectobacterium wasabiae WPP163 8529917 YP_003258932.1 CDS Pecwa_1528 NC_013421.1 1659079 1660041 R PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: ses:SARI_03961 hypothetical protein; RpiR family transcriptional regulator complement(1659079..1660041) Pectobacterium wasabiae WPP163 8529918 YP_003258933.1 CDS Pecwa_1529 NC_013421.1 1660043 1660924 R PFAM: aldose 1-epimerase; KEGG: ses:SARI_03960 hypothetical protein; aldose 1-epimerase complement(1660043..1660924) Pectobacterium wasabiae WPP163 8529919 YP_003258934.1 CDS Pecwa_1530 NC_013421.1 1660935 1662695 R PFAM: sulfatase; KEGG: ses:SARI_03959 hypothetical protein; sulfatase complement(1660935..1662695) Pectobacterium wasabiae WPP163 8529920 YP_003258935.1 CDS Pecwa_1531 NC_013421.1 1662716 1664257 R TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: ses:SARI_03958 hypothetical protein; PTS system glucose-like transporter subunit IIB complement(1662716..1664257) Pectobacterium wasabiae WPP163 8529921 YP_003258936.1 CDS Pecwa_1532 NC_013421.1 1664450 1665667 D PFAM: radical SAM protein; KEGG: ses:SARI_03135 hypothetical protein; radical SAM protein 1664450..1665667 Pectobacterium wasabiae WPP163 8529922 YP_003258937.1 CDS Pecwa_1533 NC_013421.1 1665752 1665853 R TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: pct:PC1_2740 cyd operon protein YbgT; cyd operon protein YbgT complement(1665752..1665853) Pectobacterium wasabiae WPP163 8529923 YP_003258938.1 CDS Pecwa_1534 NC_013421.1 1665874 1667013 R TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: eca:ECA2999 cytochrome d ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II complement(1665874..1667013) Pectobacterium wasabiae WPP163 8529924 YP_003258939.1 CDS Pecwa_1535 NC_013421.1 1667028 1668605 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: eca:ECA2998 cytochrome d ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(1667028..1668605) Pectobacterium wasabiae WPP163 8529925 YP_003258940.1 CDS Pecwa_1536 NC_013421.1 1669144 1669773 R PFAM: tail assembly chaperone gp38; KEGG: pct:PC1_2737 tail assembly chaperone GP38; tail assembly chaperone gp38 complement(1669144..1669773) Pectobacterium wasabiae WPP163 8529926 YP_003258941.1 CDS Pecwa_1537 NC_013421.1 1669773 1671638 R PFAM: hypothetical protein; KEGG: eca:ECA2996 bacteriophage tail fiber protein; hypothetical protein complement(1669773..1671638) Pectobacterium wasabiae WPP163 8529927 YP_003258942.1 CDS Pecwa_1538 NC_013421.1 1671934 1673223 D PFAM: nitrate and nitrite sensing domain protein; ANTAR domain protein; KEGG: eca:ECA2995 nitrate-and nitrite-responsive positive regulator; ANTAR domain-containing protein with unknown sensor 1671934..1673223 Pectobacterium wasabiae WPP163 8529928 YP_003258943.1 CDS Pecwa_1540 NC_013421.1 1673991 1674095 R hypothetical protein complement(1673991..1674095) Pectobacterium wasabiae WPP163 8529930 YP_003258944.1 CDS Pecwa_1541 NC_013421.1 1674160 1675419 D KEGG: pct:PC1_2733 nitrate-binding protein; nitrate-binding protein 1674160..1675419 Pectobacterium wasabiae WPP163 8529931 YP_003258945.1 CDS Pecwa_1542 NC_013421.1 1675432 1676346 D TIGRFAM: nitrate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_2732 nitrate ABC transporter inner membrane protein; nitrate ABC transporter inner membrane protein 1675432..1676346 Pectobacterium wasabiae WPP163 8529932 YP_003258946.1 CDS Pecwa_1543 NC_013421.1 1676357 1677151 D KEGG: eca:ECA2992 nitrate transporter; TIGRFAM: nitrate ABC transporter ATPases C and D; PFAM: ABC transporter related; SMART: ATPase AAA; nitrate ABC transporter ATPases C and D 1676357..1677151 Pectobacterium wasabiae WPP163 8529933 YP_003258947.1 CDS Pecwa_1544 NC_013421.1 1677168 1681358 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: eca:ECA2991 nitrite reductase [NAD(P)H] large subunit; nitrite reductase (NAD(P)H) large subunit 1677168..1681358 Pectobacterium wasabiae WPP163 8529934 YP_003258948.1 CDS Pecwa_1545 NC_013421.1 1681355 1684063 D PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: eca:ECA2990 nitrate reductase; molybdopterin oxidoreductase 1681355..1684063 Pectobacterium wasabiae WPP163 8529935 YP_003258949.1 CDS Pecwa_1546 NC_013421.1 1684089 1684922 D KEGG: pct:PC1_2728 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C-methyltransferase 1684089..1684922 Pectobacterium wasabiae WPP163 8529936 YP_003258950.1 CDS Pecwa_1547 NC_013421.1 1685079 1685945 D PFAM: transposase YhgA family protein; KEGG: pct:PC1_2727 transposase YhgA family protein; transposase YhgA family protein 1685079..1685945 Pectobacterium wasabiae WPP163 8529937 YP_003258951.1 CDS Pecwa_1548 NC_013421.1 1686036 1686497 R PFAM: protein of unknown function DUF1456; KEGG: pct:PC1_2726 hypothetical protein; hypothetical protein complement(1686036..1686497) Pectobacterium wasabiae WPP163 8529938 YP_003258952.1 CDS Pecwa_1549 NC_013421.1 1686582 1687103 R PFAM: acireductone dioxygenase; KEGG: eca:ECA2986 oxidase; acireductone dioxygenase complement(1686582..1687103) Pectobacterium wasabiae WPP163 8529939 YP_003258953.1 CDS Pecwa_1550 NC_013421.1 1687183 1687524 R SMART: regulatory protein ArsR; KEGG: eca:ECA2985 transcription regulator ArsR; ArsR family transcriptional regulator complement(1687183..1687524) Pectobacterium wasabiae WPP163 8529940 YP_003258954.1 CDS Pecwa_1551 NC_013421.1 1687576 1688664 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eca:ECA2984 flavoprotein xenobiotic reductase; NADH:flavin oxidoreductase 1687576..1688664 Pectobacterium wasabiae WPP163 8529941 YP_003258955.1 CDS Pecwa_1552 NC_013421.1 1689335 1689811 D PFAM: protein of unknown function DUF1348; KEGG: pct:PC1_2714 hypothetical protein; hypothetical protein 1689335..1689811 Pectobacterium wasabiae WPP163 8529942 YP_003258956.1 CDS Pecwa_1554 NC_013421.1 1690618 1691799 R PFAM: mandelate racemase/muconate lactonizing protein; KEGG: pct:PC1_2688 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(1690618..1691799) Pectobacterium wasabiae WPP163 8529944 YP_003258957.1 CDS Pecwa_1555 NC_013421.1 1691907 1693406 R PFAM: sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; KEGG: eca:ECA2958 sulfate transporter; sulfate transporter complement(1691907..1693406) Pectobacterium wasabiae WPP163 8529945 YP_003258958.1 CDS Pecwa_1556 NC_013421.1 1693618 1694403 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eca:ECA2933 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1693618..1694403) Pectobacterium wasabiae WPP163 8529946 YP_003258959.1 CDS Pecwa_1557 NC_013421.1 1694481 1695968 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: eca:ECA2932 outer membrane efflux lipoprotein; NodT family RND efflux system outer membrane lipoprotein complement(1694481..1695968) Pectobacterium wasabiae WPP163 8529947 YP_003258960.1 CDS Pecwa_1558 NC_013421.1 1696056 1696670 D PFAM: regulatory protein TetR; KEGG: eca:ECA2931 TetR family transcriptional regulator; TetR family transcriptional regulator 1696056..1696670 Pectobacterium wasabiae WPP163 8529948 YP_003258961.1 CDS Pecwa_1559 NC_013421.1 1696746 1697855 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: hypothetical protein; KEGG: eca:ECA2930 HlyD family hypothetical protein; RND family efflux transporter MFP subunit 1696746..1697855 Pectobacterium wasabiae WPP163 8529949 YP_003258962.1 CDS Pecwa_1560 NC_013421.1 1697852 1700932 D PFAM: acriflavin resistance protein; KEGG: eca:ECA2929 efflux protein; acriflavin resistance protein 1697852..1700932 Pectobacterium wasabiae WPP163 8529950 YP_003258963.1 CDS Pecwa_1561 NC_013421.1 1700987 1701142 R KEGG: dze:Dd1591_1514 integrase; integrase complement(1700987..1701142) Pectobacterium wasabiae WPP163 8529951 YP_003258964.1 CDS Pecwa_1562 NC_013421.1 1701747 1702214 R PFAM: GCN5-related N-acetyltransferase; KEGG: sed:SeD_A1453 acetyltransferase; N-acetyltransferase GCN5 complement(1701747..1702214) Pectobacterium wasabiae WPP163 8529952 YP_003258965.1 CDS Pecwa_1563 NC_013421.1 1702514 1702660 D KEGG: eca:ECA1633 hypothetical protein; hypothetical protein 1702514..1702660 Pectobacterium wasabiae WPP163 8529953 YP_003258966.1 CDS Pecwa_1564 NC_013421.1 1702691 1702879 D KEGG: eca:ECA2917 hypothetical protein; hypothetical protein 1702691..1702879 Pectobacterium wasabiae WPP163 8529954 YP_003258967.1 CDS Pecwa_1565 NC_013421.1 1702959 1703132 D KEGG: eca:ECA2916 hypothetical protein; hypothetical protein 1702959..1703132 Pectobacterium wasabiae WPP163 8529955 YP_003258968.1 CDS Pecwa_1566 NC_013421.1 1703256 1703492 D KEGG: eca:ECA1636 hypothetical protein; hypothetical protein 1703256..1703492 Pectobacterium wasabiae WPP163 8529956 YP_003258969.1 CDS Pecwa_1567 NC_013421.1 1703532 1703882 D KEGG: eca:ECA1637 hypothetical protein; hypothetical protein 1703532..1703882 Pectobacterium wasabiae WPP163 8529957 YP_003258970.1 CDS Pecwa_1569 NC_013421.1 1704306 1704629 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: kpn:KPN_01147 hypothetical protein; antibiotic biosynthesis monooxygenase 1704306..1704629 Pectobacterium wasabiae WPP163 8529959 YP_003258971.1 CDS Pecwa_1570 NC_013421.1 1704622 1705014 D KEGG: kpe:KPK_3349 ACT domain protein; ACT domain protein 1704622..1705014 Pectobacterium wasabiae WPP163 8529960 YP_003258972.1 CDS Pecwa_1571 NC_013421.1 1705016 1705717 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: esa:ESA_pESA3p05470 hypothetical protein; ArsR family transcriptional regulator 1705016..1705717 Pectobacterium wasabiae WPP163 8529961 YP_003258973.1 CDS Pecwa_1573 NC_013421.1 1706398 1706796 R KEGG: eta:ETA_00510 hypothetical protein; hypothetical protein complement(1706398..1706796) Pectobacterium wasabiae WPP163 8529963 YP_003258974.1 CDS Pecwa_1574 NC_013421.1 1706892 1707548 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: eta:ETA_00500 probable transcriptional regulator; AraC family transcriptional regulator 1706892..1707548 Pectobacterium wasabiae WPP163 8529964 YP_003258975.1 CDS Pecwa_1575 NC_013421.1 1707859 1708146 D KEGG: eca:ECA1662 hypothetical protein; hypothetical protein 1707859..1708146 Pectobacterium wasabiae WPP163 8529965 YP_003258976.1 CDS Pecwa_1576 NC_013421.1 1708175 1708459 D PFAM: conjugal transfer protein TraD; KEGG: eca:ECA1663 hypothetical protein; conjugal transfer protein TraD 1708175..1708459 Pectobacterium wasabiae WPP163 8529966 YP_003258977.1 CDS Pecwa_1579 NC_013421.1 1709426 1710148 D KEGG: eta:ETA_09590 hypothetical protein; hypothetical protein 1709426..1710148 Pectobacterium wasabiae WPP163 8529969 YP_003258978.1 CDS Pecwa_1580 NC_013421.1 1710151 1710639 D KEGG: eta:ETA_09580 hypothetical protein; hypothetical protein 1710151..1710639 Pectobacterium wasabiae WPP163 8529970 YP_003258979.1 CDS Pecwa_1581 NC_013421.1 1710973 1712421 D KEGG: eca:ECA1668 type IV prepilin; type IV prepilin 1710973..1712421 Pectobacterium wasabiae WPP163 8529971 YP_003258980.1 CDS Pecwa_1582 NC_013421.1 1712588 1713430 R PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit; integrase catalytic subunit complement(1712588..1713430) Pectobacterium wasabiae WPP163 8529972 YP_003258981.1 CDS Pecwa_1583 NC_013421.1 1713439 1713729 R PFAM: transposase IS3/IS911 family protein; KEGG: har:HEAR2248 transposase; transposase IS3/IS911 family protein complement(1713439..1713729) Pectobacterium wasabiae WPP163 8529973 YP_003258982.1 CDS Pecwa_1584 NC_013421.1 1714014 1714442 D hypothetical protein 1714014..1714442 Pectobacterium wasabiae WPP163 8529974 YP_003258983.1 CDS Pecwa_1585 NC_013421.1 1714420 1714626 R KEGG: eca:ECA1672A hypothetical protein; hypothetical protein complement(1714420..1714626) Pectobacterium wasabiae WPP163 8529975 YP_003258984.1 CDS Pecwa_1586 NC_013421.1 1714725 1716002 R PFAM: integrase; KEGG: dda:Dd703_2459 integrase; integrase complement(1714725..1716002) Pectobacterium wasabiae WPP163 8529976 YP_003258985.1 CDS Pecwa_1587 NC_013421.1 1716368 1717165 R PFAM: protein of unknown function DUF980; KEGG: pct:PC1_1479 hypothetical protein; hypothetical protein complement(1716368..1717165) Pectobacterium wasabiae WPP163 8529978 YP_003258986.1 CDS Pecwa_1589 NC_013421.1 1719818 1720093 D PFAM: regulatory protein LysR; KEGG: pct:PC1_2674 LysR family transcriptional regulator; LysR family transcriptional regulator 1719818..1720093 Pectobacterium wasabiae WPP163 8529982 YP_003258987.1 CDS Pecwa_1590 NC_013421.1 1720482 1720748 D PFAM: Sigma-S stabilisation anti-adaptor protein; KEGG: eca:ECA2886 hypothetical protein; hypothetical protein 1720482..1720748 Pectobacterium wasabiae WPP163 8529983 YP_003258988.1 CDS Pecwa_1591 NC_013421.1 1721059 1722471 R involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; D-alanine/D-serine/glycine permease complement(1721059..1722471) Pectobacterium wasabiae WPP163 8529984 YP_003258989.1 CDS Pecwa_1592 NC_013421.1 1723641 1723928 D KEGG: pct:PC1_2671 hypothetical protein; hypothetical protein 1723641..1723928 Pectobacterium wasabiae WPP163 8529986 YP_003258990.1 CDS Pecwa_1593 NC_013421.1 1724022 1724246 R PFAM: protein of unknown function DUF2594; KEGG: pct:PC1_2670 hypothetical protein; hypothetical protein complement(1724022..1724246) Pectobacterium wasabiae WPP163 8529987 YP_003258991.1 CDS Pecwa_1594 NC_013421.1 1724884 1725540 D in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 1724884..1725540 Pectobacterium wasabiae WPP163 8529988 YP_003258992.1 CDS uvrC NC_013421.1 1725533 1727365 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1725533..1727365 Pectobacterium wasabiae WPP163 8529989 YP_003258993.1 CDS Pecwa_1596 NC_013421.1 1727424 1727972 D KEGG: pct:PC1_2667 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; phosphatidylglycerophosphate synthetase 1727424..1727972 Pectobacterium wasabiae WPP163 8529990 YP_003258994.1 CDS Pecwa_1597 NC_013421.1 1728416 1730224 D PFAM: integrase; KEGG: net:Neut_0006 phage integrase; integrase 1728416..1730224 Pectobacterium wasabiae WPP163 8529992 YP_003258995.1 CDS Pecwa_1598 NC_013421.1 1730382 1732631 D PFAM: KAP P-loop domain protein; KEGG: prw:PsycPRwf_0010 kap P-loop domain-containing protein; KAP P-loop domain-containing protein 1730382..1732631 Pectobacterium wasabiae WPP163 8529993 YP_003258996.1 CDS Pecwa_1599 NC_013421.1 1732929 1734161 D KEGG: rpf:Rpic12D_2663 hypothetical protein; hypothetical protein 1732929..1734161 Pectobacterium wasabiae WPP163 8529994 YP_003258997.1 CDS Pecwa_1600 NC_013421.1 1734359 1737952 R PFAM: DEAD/DEAH box helicase; helicase domain protein; type III restriction protein res subunit; SMART: DEAD/DEAH box helicase ; helicase; KEGG: bxe:Bxe_A1793 helicase-like protein; DEAD/DEAH box helicase complement(1734359..1737952) Pectobacterium wasabiae WPP163 8529995 YP_003258998.1 CDS Pecwa_1601 NC_013421.1 1737903 1738673 R KEGG: bxe:Bxe_A1797 hypothetical protein; hypothetical protein complement(1737903..1738673) Pectobacterium wasabiae WPP163 8529996 YP_003258999.1 CDS Pecwa_1602 NC_013421.1 1739057 1739275 R hypothetical protein complement(1739057..1739275) Pectobacterium wasabiae WPP163 8529997 YP_003259000.1 CDS Pecwa_1603 NC_013421.1 1739693 1740376 R KEGG: pst:PSPTO_4750 hypothetical protein; hypothetical protein complement(1739693..1740376) Pectobacterium wasabiae WPP163 8529998 YP_003259001.1 CDS Pecwa_1604 NC_013421.1 1740479 1740733 R KEGG: dze:Dd1591_0412 transcriptional regulator, Nlp; transcriptional regulator, Nlp complement(1740479..1740733) Pectobacterium wasabiae WPP163 8529999 YP_003259002.1 CDS Pecwa_1605 NC_013421.1 1741102 1741380 R KEGG: dze:Dd1591_0412 transcriptional regulator, Nlp; transcriptional regulator, Nlp complement(1741102..1741380) Pectobacterium wasabiae WPP163 8530000 YP_003259003.1 CDS Pecwa_1606 NC_013421.1 1741995 1742513 D TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: pct:PC1_0054 type VI secretion system effector, Hcp1 family; type VI secretion system effector 1741995..1742513 Pectobacterium wasabiae WPP163 8530001 YP_003259004.1 CDS Pecwa_1607 NC_013421.1 1742607 1744457 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 rhs accessory genetic element; ImpA family type VI secretion-associated protein 1742607..1744457 Pectobacterium wasabiae WPP163 8530002 YP_003259005.1 CDS Pecwa_1608 NC_013421.1 1744489 1744935 D PFAM: Domain of unknown function DUF1795; KEGG: eca:ECA4277 hypothetical protein; hypothetical protein 1744489..1744935 Pectobacterium wasabiae WPP163 8530003 YP_003259006.1 CDS Pecwa_1609 NC_013421.1 1744928 1749271 D TIGRFAM: hypothetical protein; PFAM: PAAR repeat-containing protein; hypothetical protein; KEGG: eca:ECA2869 rhs protein; hypothetical protein 1744928..1749271 Pectobacterium wasabiae WPP163 8530004 YP_003259007.1 CDS Pecwa_1610 NC_013421.1 1749286 1749834 D hypothetical protein 1749286..1749834 Pectobacterium wasabiae WPP163 8530005 YP_003259008.1 CDS Pecwa_1611 NC_013421.1 1749903 1750886 D KEGG: eca:ECA1658 hypothetical protein; hypothetical protein 1749903..1750886 Pectobacterium wasabiae WPP163 8530006 YP_003259009.1 CDS Pecwa_1612 NC_013421.1 1751330 1752139 R KEGG: cps:CPS_1649 hypothetical protein; hypothetical protein complement(1751330..1752139) Pectobacterium wasabiae WPP163 8530007 YP_003259010.1 CDS Pecwa_1613 NC_013421.1 1752564 1754162 D PFAM: sigma-54 factor interaction domain-containing protein; ATPase AAA; SMART: AAA ATPase; KEGG: dze:Dd1591_0424 sigma 54 interacting domain protein; sigma-54 interacting domain-containing protein 1752564..1754162 Pectobacterium wasabiae WPP163 8530008 YP_003259011.1 CDS Pecwa_1614 NC_013421.1 1754222 1756003 R PFAM: relaxase; protein of unknown function DUF1528; KEGG: dze:Dd1591_0425 relaxase; relaxase complement(1754222..1756003) Pectobacterium wasabiae WPP163 8530009 YP_003259012.1 CDS Pecwa_1615 NC_013421.1 1756373 1757089 D KEGG: pfo:Pfl01_3031 hypothetical protein; hypothetical protein 1756373..1757089 Pectobacterium wasabiae WPP163 8530010 YP_003259013.1 CDS Pecwa_1616 NC_013421.1 1757091 1757666 D KEGG: pfo:Pfl01_3030 hypothetical protein; hypothetical protein 1757091..1757666 Pectobacterium wasabiae WPP163 8530011 YP_003259014.1 CDS Pecwa_1617 NC_013421.1 1757846 1758229 D KEGG: tau:Tola_2452 hypothetical protein; hypothetical protein 1757846..1758229 Pectobacterium wasabiae WPP163 8530012 YP_003259015.1 CDS Pecwa_1618 NC_013421.1 1758243 1759760 R KEGG: dze:Dd1591_0428 hypothetical protein; hypothetical protein complement(1758243..1759760) Pectobacterium wasabiae WPP163 8530013 YP_003259016.1 CDS Pecwa_1619 NC_013421.1 1759763 1760113 R KEGG: dze:Dd1591_0429 hypothetical protein; hypothetical protein complement(1759763..1760113) Pectobacterium wasabiae WPP163 8530014 YP_003259017.1 CDS Pecwa_1620 NC_013421.1 1760110 1761510 R KEGG: dze:Dd1591_0430 hypothetical protein; hypothetical protein complement(1760110..1761510) Pectobacterium wasabiae WPP163 8530015 YP_003259018.1 CDS Pecwa_1621 NC_013421.1 1761518 1762453 R PFAM: protein of unknown function DUF1527; KEGG: dze:Dd1591_0431 protein of unknown function DUF1527; hypothetical protein complement(1761518..1762453) Pectobacterium wasabiae WPP163 8530016 YP_003259019.1 CDS Pecwa_1622 NC_013421.1 1762450 1762884 R PFAM: protein of unknown function DUF1525; KEGG: dze:Dd1591_0432 protein of unknown function DUF1525; hypothetical protein complement(1762450..1762884) Pectobacterium wasabiae WPP163 8530017 YP_003259020.1 CDS Pecwa_1623 NC_013421.1 1763024 1763764 R KEGG: bpt:Bpet1364 hypothetical protein; hypothetical protein complement(1763024..1763764) Pectobacterium wasabiae WPP163 8530018 YP_003259021.1 CDS Pecwa_1624 NC_013421.1 1763961 1764572 D KEGG: dze:Dd1591_0433 hypothetical protein; hypothetical protein 1763961..1764572 Pectobacterium wasabiae WPP163 8530019 YP_003259022.1 CDS Pecwa_1625 NC_013421.1 1764565 1765584 D PFAM: Domain of unknown function DUF1814; KEGG: dze:Dd1591_0434 domain of unknown function DUF1814; hypothetical protein 1764565..1765584 Pectobacterium wasabiae WPP163 8530020 YP_003259023.1 CDS Pecwa_1626 NC_013421.1 1765585 1768434 R KEGG: dze:Dd1591_0435 hypothetical protein; hypothetical protein complement(1765585..1768434) Pectobacterium wasabiae WPP163 8530021 YP_003259024.1 CDS Pecwa_1627 NC_013421.1 1768434 1768871 R KEGG: dze:Dd1591_0436 secreted protein; secreted protein complement(1768434..1768871) Pectobacterium wasabiae WPP163 8530022 YP_003259025.1 CDS Pecwa_1628 NC_013421.1 1768852 1770258 R KEGG: dze:Dd1591_0437 secreted protein; secreted protein complement(1768852..1770258) Pectobacterium wasabiae WPP163 8530023 YP_003259026.1 CDS Pecwa_1629 NC_013421.1 1770248 1771150 R KEGG: tau:Tola_2441 secreted protein; secreted protein complement(1770248..1771150) Pectobacterium wasabiae WPP163 8530024 YP_003259027.1 CDS Pecwa_1630 NC_013421.1 1771147 1771827 R KEGG: dze:Dd1591_0439 secreted protein; secreted protein complement(1771147..1771827) Pectobacterium wasabiae WPP163 8530025 YP_003259028.1 CDS Pecwa_1631 NC_013421.1 1771824 1772222 R KEGG: dze:Dd1591_0440 hypothetical protein; hypothetical protein complement(1771824..1772222) Pectobacterium wasabiae WPP163 8530026 YP_003259029.1 CDS Pecwa_1632 NC_013421.1 1772235 1772591 R KEGG: dze:Dd1591_0441 hypothetical protein; hypothetical protein complement(1772235..1772591) Pectobacterium wasabiae WPP163 8530027 YP_003259030.1 CDS Pecwa_1633 NC_013421.1 1772612 1772845 R KEGG: dze:Dd1591_0442 hypothetical protein; hypothetical protein complement(1772612..1772845) Pectobacterium wasabiae WPP163 8530028 YP_003259031.1 CDS Pecwa_1634 NC_013421.1 1772842 1773222 R PFAM: protein of unknown function, RAQPRD; KEGG: dia:Dtpsy_1172 plasmid conserved hypothetical protein RAQPRD; hypothetical protein complement(1772842..1773222) Pectobacterium wasabiae WPP163 8530029 YP_003259032.1 CDS Pecwa_1635 NC_013421.1 1773257 1773367 D hypothetical protein 1773257..1773367 Pectobacterium wasabiae WPP163 8530030 YP_003259033.1 CDS Pecwa_1636 NC_013421.1 1773351 1774451 R PFAM: ion transporter ; pentapeptide repeat protein; KEGG: dal:Dalk_3538 ion transporter; ion transporter complement(1773351..1774451) Pectobacterium wasabiae WPP163 8530031 YP_003259034.1 CDS Pecwa_1637 NC_013421.1 1774547 1775296 R KEGG: dze:Dd1591_0447 hypothetical protein; hypothetical protein complement(1774547..1775296) Pectobacterium wasabiae WPP163 8530032 YP_003259035.1 CDS Pecwa_1638 NC_013421.1 1775293 1777452 R KEGG: dze:Dd1591_0448 hypothetical protein; hypothetical protein complement(1775293..1777452) Pectobacterium wasabiae WPP163 8530033 YP_003259036.1 CDS Pecwa_1639 NC_013421.1 1777457 1777996 R KEGG: dze:Dd1591_0449 hypothetical protein; hypothetical protein complement(1777457..1777996) Pectobacterium wasabiae WPP163 8530034 YP_003259037.1 CDS Pecwa_1640 NC_013421.1 1777993 1778583 R PFAM: lytic transglycosylase catalytic; KEGG: dze:Dd1591_0450 signal peptide; lytic transglycosylase complement(1777993..1778583) Pectobacterium wasabiae WPP163 8530035 YP_003259038.1 CDS Pecwa_1641 NC_013421.1 1778565 1779296 R KEGG: dze:Dd1591_0451 secreted protein; secreted protein complement(1778565..1779296) Pectobacterium wasabiae WPP163 8530036 YP_003259039.1 CDS Pecwa_1642 NC_013421.1 1779308 1779958 R KEGG: dze:Dd1591_0452 hypothetical protein; hypothetical protein complement(1779308..1779958) Pectobacterium wasabiae WPP163 8530037 YP_003259040.1 CDS Pecwa_1643 NC_013421.1 1779955 1780524 R KEGG: dze:Dd1591_0453 secreted protein; secreted protein complement(1779955..1780524) Pectobacterium wasabiae WPP163 8530038 YP_003259041.1 CDS Pecwa_1644 NC_013421.1 1780722 1782512 D KEGG: xca:xccb100_2436 hypothetical protein YbjD; hypothetical protein 1780722..1782512 Pectobacterium wasabiae WPP163 8530039 YP_003259042.1 CDS Pecwa_1645 NC_013421.1 1782499 1784319 D PFAM: UvrD/REP helicase; KEGG: tau:Tola_2426 UvrD/REP helicase; UvrD/REP helicase 1782499..1784319 Pectobacterium wasabiae WPP163 8530040 YP_003259043.1 CDS Pecwa_1646 NC_013421.1 1784404 1786683 R SMART: DEAD/DEAH box helicase; KEGG: dze:Dd1591_0457 DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(1784404..1786683) Pectobacterium wasabiae WPP163 8530041 YP_003259044.1 CDS Pecwa_1647 NC_013421.1 1786819 1787928 R KEGG: dze:Dd1591_0458 hypothetical protein; hypothetical protein complement(1786819..1787928) Pectobacterium wasabiae WPP163 8530042 YP_003259045.1 CDS Pecwa_1648 NC_013421.1 1787999 1788646 R KEGG: dze:Dd1591_0459 hypothetical protein; hypothetical protein complement(1787999..1788646) Pectobacterium wasabiae WPP163 8530043 YP_003259046.1 CDS Pecwa_1649 NC_013421.1 1788740 1789414 R KEGG: dze:Dd1591_0461 hypothetical protein; hypothetical protein complement(1788740..1789414) Pectobacterium wasabiae WPP163 8530044 YP_003259047.1 CDS Pecwa_1650 NC_013421.1 1789497 1790417 R KEGG: dze:Dd1591_0462 hypothetical protein; hypothetical protein complement(1789497..1790417) Pectobacterium wasabiae WPP163 8530045 YP_003259048.1 CDS Pecwa_1651 NC_013421.1 1790795 1791118 D PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: cvi:CV_1243 trans-acting regulatory HvrA protein; histone family protein nucleoid-structuring protein H-NS 1790795..1791118 Pectobacterium wasabiae WPP163 8530046 YP_003259049.1 CDS Pecwa_1652 NC_013421.1 1791190 1792032 R KEGG: rpf:Rpic12D_0661 hypothetical protein; hypothetical protein complement(1791190..1792032) Pectobacterium wasabiae WPP163 8530047 YP_003259050.1 CDS Pecwa_1653 NC_013421.1 1792158 1792523 R KEGG: dze:Dd1591_0463 hypothetical protein; hypothetical protein complement(1792158..1792523) Pectobacterium wasabiae WPP163 8530048 YP_003259051.1 CDS Pecwa_1654 NC_013421.1 1792671 1793468 R KEGG: dze:Dd1591_0464 hypothetical protein; hypothetical protein complement(1792671..1793468) Pectobacterium wasabiae WPP163 8530049 YP_003259052.1 CDS Pecwa_1655 NC_013421.1 1793615 1793752 D hypothetical protein 1793615..1793752 Pectobacterium wasabiae WPP163 8530050 YP_003259053.1 CDS Pecwa_1656 NC_013421.1 1793790 1795253 R TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: dze:Dd1591_0465 DNA-cytosine methyltransferase; DNA-cytosine methyltransferase complement(1793790..1795253) Pectobacterium wasabiae WPP163 8530051 YP_003259054.1 CDS Pecwa_1657 NC_013421.1 1795779 1797779 R KEGG: dze:Dd1591_0466 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase III complement(1795779..1797779) Pectobacterium wasabiae WPP163 8530052 YP_003259055.1 CDS Pecwa_1658 NC_013421.1 1798272 1798526 D KEGG: dze:Dd1591_0468 hypothetical protein; hypothetical protein 1798272..1798526 Pectobacterium wasabiae WPP163 8530053 YP_003259056.1 CDS Pecwa_1659 NC_013421.1 1798797 1799198 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(1798797..1799198) Pectobacterium wasabiae WPP163 8530054 YP_003259057.1 CDS Pecwa_1660 NC_013421.1 1799260 1799820 R KEGG: dze:Dd1591_0474 hypothetical protein; hypothetical protein complement(1799260..1799820) Pectobacterium wasabiae WPP163 8530055 YP_003259058.1 CDS Pecwa_1661 NC_013421.1 1799817 1800635 R PFAM: Domain of unknown function DUF1845; KEGG: dze:Dd1591_0475 domain of unknown function DUF1845; hypothetical protein complement(1799817..1800635) Pectobacterium wasabiae WPP163 8530056 YP_003259059.1 CDS Pecwa_1662 NC_013421.1 1800916 1802130 R KEGG: dze:Dd1591_0476 hypothetical protein; hypothetical protein complement(1800916..1802130) Pectobacterium wasabiae WPP163 8530057 YP_003259060.1 CDS Pecwa_1663 NC_013421.1 1802127 1802690 R KEGG: dze:Dd1591_0477 hypothetical protein; hypothetical protein complement(1802127..1802690) Pectobacterium wasabiae WPP163 8530058 YP_003259061.1 CDS Pecwa_1664 NC_013421.1 1802702 1804426 R KEGG: dze:Dd1591_0478 hypothetical protein; hypothetical protein complement(1802702..1804426) Pectobacterium wasabiae WPP163 8530059 YP_003259062.1 CDS Pecwa_1665 NC_013421.1 1804419 1804679 R KEGG: dze:Dd1591_0479 hypothetical protein; hypothetical protein complement(1804419..1804679) Pectobacterium wasabiae WPP163 8530060 YP_003259063.1 CDS Pecwa_1666 NC_013421.1 1804663 1805526 R PFAM: cobyrinic acid ac-diamide synthase; KEGG: tau:Tola_2396 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase complement(1804663..1805526) Pectobacterium wasabiae WPP163 8530061 YP_003259064.1 CDS Pecwa_1667 NC_013421.1 1805560 1805772 R PFAM: prophage CP4-57 regulator; KEGG: dze:Dd1591_0481 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA complement(1805560..1805772) Pectobacterium wasabiae WPP163 8530062 YP_003259065.1 CDS Pecwa_1668 NC_013421.1 1806211 1807137 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet1288 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1806211..1807137) Pectobacterium wasabiae WPP163 8530063 YP_003259066.1 CDS Pecwa_1669 NC_013421.1 1808136 1809401 D PFAM: integrase; KEGG: eca:ECA2879 integrase; integrase 1808136..1809401 Pectobacterium wasabiae WPP163 8530066 YP_003259067.1 CDS hsdR NC_013421.1 1809711 1813220 D restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities; type I restriction enzyme EcoKI subunit R 1809711..1813220 Pectobacterium wasabiae WPP163 8530067 YP_003259068.1 CDS Pecwa_1671 NC_013421.1 1813292 1814881 D PFAM: N-6 DNA methylase; KEGG: stm:STM4525 DNA methylase M; adenine-specific DNA-methyltransferase 1813292..1814881 Pectobacterium wasabiae WPP163 8530068 YP_003259069.1 CDS Pecwa_1672 NC_013421.1 1814878 1816359 D PFAM: restriction modification system DNA specificity domain; KEGG: stt:t4574 EcoKI restriction-modification system protein HsdS; restriction modification system DNA specificity domain-containing protein 1814878..1816359 Pectobacterium wasabiae WPP163 8530069 YP_003259070.1 CDS Pecwa_1673 NC_013421.1 1816601 1816777 D KEGG: stt:t4573 endoribonuclease SymE; endoribonuclease SymE 1816601..1816777 Pectobacterium wasabiae WPP163 8530070 YP_003259071.1 CDS Pecwa_1674 NC_013421.1 1816842 1818929 R PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: dol:Dole_2238 hypothetical protein; hypothetical protein complement(1816842..1818929) Pectobacterium wasabiae WPP163 8530071 YP_003259072.1 CDS Pecwa_1675 NC_013421.1 1819036 1825350 R PFAM: DEAD/DEAH box helicase; protein of unknown function DUF1998; helicase; SMART: DEAD/DEAH box helicase ; helicase; KEGG: sek:SSPA4005 hypothetical protein; DEAD/DEAH box helicase complement(1819036..1825350) Pectobacterium wasabiae WPP163 8530072 YP_003259073.1 CDS Pecwa_1676 NC_013421.1 1825353 1828646 R KEGG: sek:SSPA4006 hypothetical protein; hypothetical protein complement(1825353..1828646) Pectobacterium wasabiae WPP163 8530073 YP_003259074.1 CDS Pecwa_1677 NC_013421.1 1829121 1829996 R KEGG: dze:Dd1591_3691 hypothetical protein; hypothetical protein complement(1829121..1829996) Pectobacterium wasabiae WPP163 8530074 YP_003259075.1 CDS Pecwa_1680 NC_013421.1 1831140 1833242 D KEGG: eic:NT01EI_2039 hypothetical protein; hypothetical protein 1831140..1833242 Pectobacterium wasabiae WPP163 8530077 YP_003259076.1 CDS Pecwa_1681 NC_013421.1 1833269 1835668 D KEGG: eic:NT01EI_2038 hypothetical protein; hypothetical protein 1833269..1835668 Pectobacterium wasabiae WPP163 8530078 YP_003259077.1 CDS Pecwa_1683 NC_013421.1 1836427 1838133 R KEGG: ppg:PputGB1_4758 labile enterotoxin output A; labile enterotoxin output A complement(1836427..1838133) Pectobacterium wasabiae WPP163 8530080 YP_003259078.1 CDS Pecwa_1684 NC_013421.1 1838133 1840331 R KEGG: ppg:PputGB1_4757 protein of unknown function DUF900 hydrolase family protein; hypothetical protein complement(1838133..1840331) Pectobacterium wasabiae WPP163 8530081 YP_003259079.1 CDS Pecwa_1685 NC_013421.1 1840867 1841076 R TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: dze:Dd1591_1494 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator complement(1840867..1841076) Pectobacterium wasabiae WPP163 8530082 YP_003259080.1 CDS Pecwa_1686 NC_013421.1 1841066 1841650 R KEGG: dze:Dd1591_1495 hypothetical protein; hypothetical protein complement(1841066..1841650) Pectobacterium wasabiae WPP163 8530083 YP_003259081.1 CDS Pecwa_1687 NC_013421.1 1841667 1841861 R PFAM: prophage CP4-57 regulator; KEGG: eca:ECA1627 prophage regulatory protein; phage transcriptional regulator, AlpA complement(1841667..1841861) Pectobacterium wasabiae WPP163 8530084 YP_003259082.1 CDS Pecwa_1688 NC_013421.1 1842015 1842929 R KEGG: dze:Dd1591_1508 hypothetical protein; hypothetical protein complement(1842015..1842929) Pectobacterium wasabiae WPP163 8530085 YP_003259083.1 CDS Pecwa_1689 NC_013421.1 1843033 1843137 D hypothetical protein 1843033..1843137 Pectobacterium wasabiae WPP163 8530086 YP_003259084.1 CDS Pecwa_1690 NC_013421.1 1843235 1843615 R KEGG: dze:Dd1591_1511 transcriptional regulator, Nlp; transcriptional regulator, Nlp complement(1843235..1843615) Pectobacterium wasabiae WPP163 8530087 YP_003259085.1 CDS Pecwa_1691 NC_013421.1 1843778 1844077 D SMART: hypothetical protein; KEGG: dze:Dd1591_1513 XRE family transcriptional regulator; XRE family transcriptional regulator 1843778..1844077 Pectobacterium wasabiae WPP163 8530088 YP_003259086.1 CDS Pecwa_1692 NC_013421.1 1844262 1844576 D SMART: hypothetical protein; KEGG: dze:Dd1591_1513 XRE family transcriptional regulator; XRE family transcriptional regulator 1844262..1844576 Pectobacterium wasabiae WPP163 8530089 YP_003259087.1 CDS Pecwa_1693 NC_013421.1 1844711 1845982 R PFAM: integrase; KEGG: dze:Dd1591_1514 integrase; integrase complement(1844711..1845982) Pectobacterium wasabiae WPP163 8530090 YP_003259088.1 CDS Pecwa_1694 NC_013421.1 1846824 1847681 D KEGG: hypothetical protein; hypothetical protein 1846824..1847681 Pectobacterium wasabiae WPP163 8530091 YP_003259089.1 CDS Pecwa_1695 NC_013421.1 1847965 1848831 D KEGG: pct:PC1_1596 hypothetical protein; hypothetical protein 1847965..1848831 Pectobacterium wasabiae WPP163 8530092 YP_003259090.1 CDS Pecwa_1696 NC_013421.1 1848910 1849116 D PFAM: prophage CP4-57 regulator; KEGG: pct:PC1_1597 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA 1848910..1849116 Pectobacterium wasabiae WPP163 8530093 YP_003259091.1 CDS Pecwa_1697 NC_013421.1 1849485 1850690 D PFAM: integrase; KEGG: ecs:ECs3512 site specific recombinase; integrase 1849485..1850690 Pectobacterium wasabiae WPP163 8530094 YP_003259092.1 CDS Pecwa_1698 NC_013421.1 1850692 1852002 D PFAM: integrase; KEGG: cko:CKO_03527 hypothetical protein; integrase 1850692..1852002 Pectobacterium wasabiae WPP163 8530095 YP_003259093.1 CDS Pecwa_1699 NC_013421.1 1852002 1853621 D KEGG: ecs:ECs3510 hypothetical protein; hypothetical protein 1852002..1853621 Pectobacterium wasabiae WPP163 8530096 YP_003259094.1 CDS Pecwa_1700 NC_013421.1 1853622 1854020 D KEGG: ecs:ECs3509 hypothetical protein; hypothetical protein 1853622..1854020 Pectobacterium wasabiae WPP163 8530097 YP_003259095.1 CDS Pecwa_1701 NC_013421.1 1854118 1854528 D KEGG: pct:PC1_1602 hypothetical protein; hypothetical protein 1854118..1854528 Pectobacterium wasabiae WPP163 8530098 YP_003259096.1 CDS Pecwa_1702 NC_013421.1 1854867 1856618 D KEGG: pca:Pcar_0163 hypothetical protein; hypothetical protein 1854867..1856618 Pectobacterium wasabiae WPP163 8530099 YP_003259097.1 CDS Pecwa_1703 NC_013421.1 1856728 1856961 D hypothetical protein 1856728..1856961 Pectobacterium wasabiae WPP163 8530100 YP_003259098.1 CDS Pecwa_1704 NC_013421.1 1857010 1857300 D PFAM: transposase IS3/IS911 family protein; KEGG: har:HEAR2248 transposase; transposase IS3/IS911 family protein 1857010..1857300 Pectobacterium wasabiae WPP163 8530101 YP_003259099.1 CDS Pecwa_1705 NC_013421.1 1857309 1858151 D PFAM: Integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit; integrase catalytic subunit 1857309..1858151 Pectobacterium wasabiae WPP163 8530102 YP_003259100.1 CDS Pecwa_1706 NC_013421.1 1858764 1859087 R KEGG: pct:PC1_1607 hypothetical protein; hypothetical protein complement(1858764..1859087) Pectobacterium wasabiae WPP163 8530103 YP_003259101.1 CDS Pecwa_1707 NC_013421.1 1859116 1859490 R KEGG: pct:PC1_1608 hypothetical protein; hypothetical protein complement(1859116..1859490) Pectobacterium wasabiae WPP163 8530104 YP_003259102.1 CDS Pecwa_1708 NC_013421.1 1859526 1860323 R KEGG: pct:PC1_1609 hypothetical protein; hypothetical protein complement(1859526..1860323) Pectobacterium wasabiae WPP163 8530105 YP_003259103.1 CDS Pecwa_1709 NC_013421.1 1860645 1861961 R PFAM: relaxase/mobilization nuclease family protein; KEGG: pct:PC1_1610 relaxase/mobilization nuclease family protein; relaxase/mobilization nuclease family protein complement(1860645..1861961) Pectobacterium wasabiae WPP163 8530106 YP_003259104.1 CDS Pecwa_1710 NC_013421.1 1861930 1862307 R KEGG: pct:PC1_1611 hypothetical protein; hypothetical protein complement(1861930..1862307) Pectobacterium wasabiae WPP163 8530107 YP_003259105.1 CDS Pecwa_1711 NC_013421.1 1862613 1862834 D hypothetical protein 1862613..1862834 Pectobacterium wasabiae WPP163 8530108 YP_003259106.1 CDS Pecwa_1712 NC_013421.1 1862946 1863458 R hypothetical protein complement(1862946..1863458) Pectobacterium wasabiae WPP163 8530109 YP_003259107.1 CDS Pecwa_1713 NC_013421.1 1864229 1864504 D KEGG: pct:PC1_1614 hypothetical protein; hypothetical protein 1864229..1864504 Pectobacterium wasabiae WPP163 8530110 YP_003259108.1 CDS Pecwa_1714 NC_013421.1 1864501 1865895 D PFAM: radical SAM protein; KEGG: pct:PC1_1615 radical SAM protein; radical SAM protein 1864501..1865895 Pectobacterium wasabiae WPP163 8530111 YP_003259109.1 CDS Pecwa_1715 NC_013421.1 1865888 1867000 D PFAM: radical SAM protein; KEGG: pct:PC1_1616 radical SAM protein; radical SAM protein 1865888..1867000 Pectobacterium wasabiae WPP163 8530112 YP_003259110.1 CDS Pecwa_1716 NC_013421.1 1866997 1867653 D KEGG: pct:PC1_1617 hypothetical protein; hypothetical protein 1866997..1867653 Pectobacterium wasabiae WPP163 8530113 YP_003259111.1 CDS Pecwa_1717 NC_013421.1 1867770 1867946 R KEGG: pct:PC1_1619 hypothetical protein; hypothetical protein complement(1867770..1867946) Pectobacterium wasabiae WPP163 8530114 YP_003259112.1 CDS Pecwa_1718 NC_013421.1 1867936 1868049 R KEGG: pct:PC1_1620 hypothetical protein; hypothetical protein complement(1867936..1868049) Pectobacterium wasabiae WPP163 8530115 YP_003259113.1 CDS Pecwa_1719 NC_013421.1 1868190 1868384 D KEGG: pct:PC1_1621 hypothetical protein; hypothetical protein 1868190..1868384 Pectobacterium wasabiae WPP163 8530116 YP_003259114.1 CDS Pecwa_1720 NC_013421.1 1868426 1868635 D hypothetical protein 1868426..1868635 Pectobacterium wasabiae WPP163 8530117 YP_003259115.1 CDS Pecwa_1721 NC_013421.1 1868719 1869168 D KEGG: psb:Psyr_2650 hypothetical protein; hypothetical protein 1868719..1869168 Pectobacterium wasabiae WPP163 8530118 YP_003259116.1 CDS Pecwa_1722 NC_013421.1 1869181 1870143 D PFAM: RimK domain protein ATP-grasp; KEGG: psb:Psyr_2651 hypothetical protein; RimK domain-containing protein ATP-grasp 1869181..1870143 Pectobacterium wasabiae WPP163 8530119 YP_003259117.1 CDS Pecwa_1723 NC_013421.1 1870133 1870843 D KEGG: psb:Psyr_2652 hypothetical protein; hypothetical protein 1870133..1870843 Pectobacterium wasabiae WPP163 8530120 YP_003259118.1 CDS Pecwa_1724 NC_013421.1 1870899 1871828 D KEGG: eta:ETA_14250 hypothetical protein; hypothetical protein 1870899..1871828 Pectobacterium wasabiae WPP163 8530121 YP_003259119.1 CDS Pecwa_1725 NC_013421.1 1872317 1873141 R hypothetical protein complement(1872317..1873141) Pectobacterium wasabiae WPP163 8530122 YP_003259120.1 CDS Pecwa_1726 NC_013421.1 1873742 1874884 R PFAM: FRG domain protein; KEGG: elf:LF82_p282 hypothetical protein; FRG domain-containing protein complement(1873742..1874884) Pectobacterium wasabiae WPP163 8530123 YP_003259121.1 CDS Pecwa_1727 NC_013421.1 1874981 1876258 R PFAM: integrase; KEGG: eca:ECA1679 phage integrase; integrase complement(1874981..1876258) Pectobacterium wasabiae WPP163 8530124 YP_003259122.1 CDS Pecwa_1728 NC_013421.1 1877195 1878601 D KEGG: eca:ECA2921 hypothetical protein; hypothetical protein 1877195..1878601 Pectobacterium wasabiae WPP163 8530125 YP_003259123.1 CDS Pecwa_1729 NC_013421.1 1878891 1879766 D KEGG: eca:ECA2919 hypothetical protein; hypothetical protein 1878891..1879766 Pectobacterium wasabiae WPP163 8530126 YP_003259124.1 CDS Pecwa_1730 NC_013421.1 1879916 1880134 D PFAM: prophage CP4-57 regulator; KEGG: eca:ECA2918 phage-related protein; phage transcriptional regulator, AlpA 1879916..1880134 Pectobacterium wasabiae WPP163 8530127 YP_003259125.1 CDS Pecwa_1731 NC_013421.1 1880165 1880479 D KEGG: eca:ECA1634 hypothetical protein; hypothetical protein 1880165..1880479 Pectobacterium wasabiae WPP163 8530128 YP_003259126.1 CDS Pecwa_1732 NC_013421.1 1880557 1880853 D KEGG: eca:ECA1635 hypothetical protein; hypothetical protein 1880557..1880853 Pectobacterium wasabiae WPP163 8530129 YP_003259127.1 CDS Pecwa_1733 NC_013421.1 1880903 1881139 D KEGG: eca:ECA1636 hypothetical protein; hypothetical protein 1880903..1881139 Pectobacterium wasabiae WPP163 8530130 YP_003259128.1 CDS Pecwa_1734 NC_013421.1 1881179 1881529 D KEGG: eca:ECA1637 hypothetical protein; hypothetical protein 1881179..1881529 Pectobacterium wasabiae WPP163 8530131 YP_003259129.1 CDS Pecwa_1735 NC_013421.1 1881595 1881840 D KEGG: eca:ECA2913 DNA-binding protein; hypothetical protein 1881595..1881840 Pectobacterium wasabiae WPP163 8530132 YP_003259130.1 CDS Pecwa_1736 NC_013421.1 1882111 1883067 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein complement(1882111..1883067) Pectobacterium wasabiae WPP163 8530133 YP_003259131.1 CDS Pecwa_1737 NC_013421.1 1883338 1883817 R KEGG: eca:ECA1640 hypothetical protein; hypothetical protein complement(1883338..1883817) Pectobacterium wasabiae WPP163 8530134 YP_003259132.1 CDS Pecwa_1738 NC_013421.1 1883915 1884715 R KEGG: set:SEN1991 hypothetical protein; hypothetical protein complement(1883915..1884715) Pectobacterium wasabiae WPP163 8530135 YP_003259133.1 CDS Pecwa_1739 NC_013421.1 1884738 1885472 R KEGG: eca:ECA2910 plasmid replication protein; plasmid replication protein complement(1884738..1885472) Pectobacterium wasabiae WPP163 8530136 YP_003259134.1 CDS Pecwa_1740 NC_013421.1 1887073 1887834 D KEGG: eca:ECA1645 hypothetical protein; hypothetical protein 1887073..1887834 Pectobacterium wasabiae WPP163 8530137 YP_003259135.1 CDS Pecwa_1741 NC_013421.1 1887938 1888624 D KEGG: eca:ECA1647 hypothetical protein; hypothetical protein 1887938..1888624 Pectobacterium wasabiae WPP163 8530138 YP_003259136.1 CDS Pecwa_1742 NC_013421.1 1888691 1889680 D KEGG: pfs:pQBR0096 hypothetical protein; hypothetical protein 1888691..1889680 Pectobacterium wasabiae WPP163 8530139 YP_003259137.1 CDS Pecwa_1743 NC_013421.1 1889763 1890092 R hypothetical protein complement(1889763..1890092) Pectobacterium wasabiae WPP163 8530140 YP_003259138.1 CDS Pecwa_1744 NC_013421.1 1890279 1890656 R KEGG: eca:ECA1654 hypothetical protein; hypothetical protein complement(1890279..1890656) Pectobacterium wasabiae WPP163 8530141 YP_003259139.1 CDS Pecwa_1745 NC_013421.1 1891294 1891848 D KEGG: eca:ECA2904 lipoprotein; lipoprotein 1891294..1891848 Pectobacterium wasabiae WPP163 8530142 YP_003259140.1 CDS Pecwa_1746 NC_013421.1 1892266 1893210 D KEGG: hypothetical protein; hypothetical protein 1892266..1893210 Pectobacterium wasabiae WPP163 8530143 YP_003259141.1 CDS Pecwa_1747 NC_013421.1 1893261 1894658 R PFAM: MobA/MobL protein; KEGG: ecq:ECED1_2304 mobilization protein; MobA/MobL protein complement(1893261..1894658) Pectobacterium wasabiae WPP163 8530144 YP_003259142.1 CDS Pecwa_1749 NC_013421.1 1896501 1897223 R hypothetical protein complement(1896501..1897223) Pectobacterium wasabiae WPP163 8530146 YP_003259143.1 CDS Pecwa_1750 NC_013421.1 1897590 1897844 D KEGG: eca:ECA2895 hypothetical protein; hypothetical protein 1897590..1897844 Pectobacterium wasabiae WPP163 8530147 YP_003259144.1 CDS Pecwa_1751 NC_013421.1 1897841 1898125 D PFAM: conjugal transfer protein TraD; KEGG: eca:ECA1663 hypothetical protein; conjugal transfer protein TraD 1897841..1898125 Pectobacterium wasabiae WPP163 8530148 YP_003259145.1 CDS Pecwa_1752 NC_013421.1 1898249 1898614 D hypothetical protein 1898249..1898614 Pectobacterium wasabiae WPP163 8530149 YP_003259146.1 CDS Pecwa_1753 NC_013421.1 1898609 1899157 R hypothetical protein complement(1898609..1899157) Pectobacterium wasabiae WPP163 8530150 YP_003259147.1 CDS Pecwa_1754 NC_013421.1 1899248 1899649 R PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: eca:ECA1665 DNA-binding protein Hns; histone family protein nucleoid-structuring protein H-NS complement(1899248..1899649) Pectobacterium wasabiae WPP163 8530151 YP_003259148.1 CDS Pecwa_1755 NC_013421.1 1899887 1900222 D hypothetical protein 1899887..1900222 Pectobacterium wasabiae WPP163 8530152 YP_003259149.1 CDS Pecwa_1756 NC_013421.1 1900293 1900661 D hypothetical protein 1900293..1900661 Pectobacterium wasabiae WPP163 8530153 YP_003259150.1 CDS Pecwa_1757 NC_013421.1 1900702 1900881 D KEGG: eca:ECA1666 hypothetical protein; hypothetical protein 1900702..1900881 Pectobacterium wasabiae WPP163 8530154 YP_003259151.1 CDS Pecwa_1758 NC_013421.1 1900884 1901327 D hypothetical protein 1900884..1901327 Pectobacterium wasabiae WPP163 8530155 YP_003259152.1 CDS Pecwa_1759 NC_013421.1 1901649 1902050 D hypothetical protein 1901649..1902050 Pectobacterium wasabiae WPP163 8530156 YP_003259153.1 CDS Pecwa_1760 NC_013421.1 1902389 1902943 D PFAM: PilS domain protein; KEGG: ecg:E2348C_2109 predicted type IV pilin-like protein; PilS domain-containing protein 1902389..1902943 Pectobacterium wasabiae WPP163 8530157 YP_003259154.1 CDS Pecwa_1761 NC_013421.1 1903295 1904833 D KEGG: eca:ECA1668 type IV prepilin; type IV prepilin 1903295..1904833 Pectobacterium wasabiae WPP163 8530158 YP_003259155.1 CDS Pecwa_1762 NC_013421.1 1905008 1906786 D PFAM: S-type Pyocin domain protein; PAAR repeat-containing protein; KEGG: eca:ECA1669 hypothetical protein; S-type Pyocin domain-containing protein 1905008..1906786 Pectobacterium wasabiae WPP163 8530159 YP_003259156.1 CDS Pecwa_1763 NC_013421.1 1906786 1906995 D KEGG: ypb:YPTS_3644 hypothetical protein; hypothetical protein 1906786..1906995 Pectobacterium wasabiae WPP163 8530160 YP_003259157.1 CDS Pecwa_1764 NC_013421.1 1907102 1907323 R KEGG: eca:ECA1671 hypothetical protein; hypothetical protein complement(1907102..1907323) Pectobacterium wasabiae WPP163 8530161 YP_003259158.1 CDS Pecwa_1765 NC_013421.1 1907811 1908533 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mpt:Mpe_B0033 hypothetical protein; HNH endonuclease 1907811..1908533 Pectobacterium wasabiae WPP163 8530162 YP_003259159.1 CDS Pecwa_1766 NC_013421.1 1908654 1909931 R PFAM: integrase; KEGG: dda:Dd703_2459 integrase; integrase complement(1908654..1909931) Pectobacterium wasabiae WPP163 8530163 YP_003259160.1 CDS lacY NC_013421.1 1910335 1911591 R lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease complement(1910335..1911591) Pectobacterium wasabiae WPP163 8530165 YP_003259161.1 CDS lacZ NC_013421.1 1911720 1914851 R forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase complement(1911720..1914851) Pectobacterium wasabiae WPP163 8530166 YP_003259162.1 CDS lacI NC_013421.1 1915147 1916223 R transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; lac repressor complement(1915147..1916223) Pectobacterium wasabiae WPP163 8530167 YP_003259163.1 CDS fbpC NC_013421.1 1916405 1917454 R Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import; ferric transporter ATP-binding subunit complement(1916405..1917454) Pectobacterium wasabiae WPP163 8530168 YP_003259164.1 CDS Pecwa_1771 NC_013421.1 1917469 1919547 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1493 ferric ABC transporter permease; binding-protein-dependent transporters inner membrane component complement(1917469..1919547) Pectobacterium wasabiae WPP163 8530169 YP_003259165.1 CDS Pecwa_1772 NC_013421.1 1919724 1920758 R PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA1494 ABC transporter iron-binding protein; extracellular solute-binding protein complement(1919724..1920758) Pectobacterium wasabiae WPP163 8530170 YP_003259166.1 CDS Pecwa_1773 NC_013421.1 1920795 1922120 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1495 regulatory protein; major facilitator superfamily protein complement(1920795..1922120) Pectobacterium wasabiae WPP163 8530171 YP_003259167.1 CDS Pecwa_1774 NC_013421.1 1922209 1923768 R KEGG: eca:ECA1496 two-component system sensor histidine kinase; PFAM: MASE1 domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase complement(1922209..1923768) Pectobacterium wasabiae WPP163 8530172 YP_003259168.1 CDS Pecwa_1775 NC_013421.1 1923772 1924401 R PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: eca:ECA1497 two-component system response regulator protein; LuxR family transcriptional regulator complement(1923772..1924401) Pectobacterium wasabiae WPP163 8530173 YP_003259169.1 CDS Pecwa_1776 NC_013421.1 1924631 1925446 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: eca:ECA1498 lipoprotein-28 precursor; lipoprotein 1924631..1925446 Pectobacterium wasabiae WPP163 8530174 YP_003259170.1 CDS Pecwa_1777 NC_013421.1 1925662 1926606 D PFAM: pectate lyase/Amb allergen; SMART: pectate lyase/Amb allergen; KEGG: eca:ECA1499 pectin lyase; pectate lyase/Amb allergen 1925662..1926606 Pectobacterium wasabiae WPP163 8530175 YP_003259171.1 CDS Pecwa_1778 NC_013421.1 1926734 1927450 R TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: eca:ECA1500 aspartate racemase; aspartate racemase complement(1926734..1927450) Pectobacterium wasabiae WPP163 8530176 YP_003259172.1 CDS Pecwa_1779 NC_013421.1 1927673 1928572 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eca:ECA1501 LysR family transcriptional regulator; LysR family transcriptional regulator 1927673..1928572 Pectobacterium wasabiae WPP163 8530177 YP_003259173.1 CDS Pecwa_1780 NC_013421.1 1928648 1929955 R PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA1503 proton glutamate symport protein; sodium:dicarboxylate symporter complement(1928648..1929955) Pectobacterium wasabiae WPP163 8530178 YP_003259174.1 CDS Pecwa_1781 NC_013421.1 1930748 1932898 R TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: pct:PC1_1383 formate dehydrogenase, subunit alpha; formate dehydrogenase subunit alpha complement(1930748..1932898) Pectobacterium wasabiae WPP163 8530179 YP_003259175.1 CDS Pecwa_1782 NC_013421.1 1933421 1935100 D PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: pct:PC1_1384 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1933421..1935100 Pectobacterium wasabiae WPP163 8530180 YP_003259176.1 CDS Pecwa_1783 NC_013421.1 1935639 1937543 D PFAM: iron permease FTR1; KEGG: pct:PC1_1385 iron permease FTR1; iron permease FTR1 1935639..1937543 Pectobacterium wasabiae WPP163 8530181 YP_003259177.1 CDS Pecwa_1784 NC_013421.1 1937652 1938197 D PFAM: Ferrous iron transporter; KEGG: pct:PC1_1386 hypothetical protein; Ferrous iron transporter 1937652..1938197 Pectobacterium wasabiae WPP163 8530182 YP_003259178.1 CDS Pecwa_1785 NC_013421.1 1938374 1939771 D PFAM: protein of unknown function DUF2318, membrane; YHS domain protein; KEGG: pct:PC1_1387 YHS domain protein; hypothetical protein 1938374..1939771 Pectobacterium wasabiae WPP163 8530183 YP_003259179.1 CDS Pecwa_1786 NC_013421.1 1939774 1941063 D PFAM: protein of unknown function DUF214; KEGG: eca:ECA1513 permease; hypothetical protein 1939774..1941063 Pectobacterium wasabiae WPP163 8530184 YP_003259180.1 CDS Pecwa_1787 NC_013421.1 1941053 1942192 D PFAM: protein of unknown function DUF214; KEGG: pct:PC1_1389 hypothetical protein; hypothetical protein 1941053..1942192 Pectobacterium wasabiae WPP163 8530185 YP_003259181.1 CDS Pecwa_1788 NC_013421.1 1942197 1942913 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1515 ABC transporter ATP binding protein; ABC transporter 1942197..1942913 Pectobacterium wasabiae WPP163 8530186 YP_003259182.1 CDS Pecwa_1789 NC_013421.1 1942900 1943397 D PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: eca:ECA1516 lipoprotein; redoxin 1942900..1943397 Pectobacterium wasabiae WPP163 8530187 YP_003259183.1 CDS Pecwa_1790 NC_013421.1 1943447 1944424 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA1517 hypothetical protein; hypothetical protein complement(1943447..1944424) Pectobacterium wasabiae WPP163 8530188 YP_003259184.1 CDS Pecwa_1791 NC_013421.1 1944520 1945353 R PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA1518 AraC family transcription regulator; AraC family transcriptional regulator complement(1944520..1945353) Pectobacterium wasabiae WPP163 8530189 YP_003259185.1 CDS Pecwa_1792 NC_013421.1 1945702 1946655 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1519 transcriptional regulator CysB-like protein; transcriptional regulator CysB-like protein 1945702..1946655 Pectobacterium wasabiae WPP163 8530190 YP_003259186.1 CDS gltP NC_013421.1 1947084 1948400 D carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transporter; glutamate/aspartate:proton symporter 1947084..1948400 Pectobacterium wasabiae WPP163 8530191 YP_003259187.1 CDS Pecwa_1794 NC_013421.1 1948484 1949587 R PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: pct:PC1_1396 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1948484..1949587) Pectobacterium wasabiae WPP163 8530192 YP_003259188.1 CDS Pecwa_1795 NC_013421.1 1949705 1950571 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1524 ABC transporter permease; binding-protein-dependent transporters inner membrane component complement(1949705..1950571) Pectobacterium wasabiae WPP163 8530193 YP_003259189.1 CDS Pecwa_1796 NC_013421.1 1950543 1951397 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_1398 ABC transporter; ABC transporter complement(1950543..1951397) Pectobacterium wasabiae WPP163 8530194 YP_003259190.1 CDS Pecwa_1797 NC_013421.1 1951452 1952474 R KEGG: pct:PC1_1399 ABC transporter periplasmic protein; ABC transporter periplasmic protein complement(1951452..1952474) Pectobacterium wasabiae WPP163 8530195 YP_003259191.1 CDS Pecwa_1798 NC_013421.1 1952796 1953818 D PFAM: malate/L-lactate dehydrogenase; KEGG: eca:ECA1527 malate/lactate dehydrogenase; malate/L-lactate dehydrogenase 1952796..1953818 Pectobacterium wasabiae WPP163 8530196 YP_003259192.1 CDS Pecwa_1799 NC_013421.1 1953880 1954908 D PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA1528 taurine-binding periplasmic protein; substrate-binding region of ABC-type glycine betaine transporter 1953880..1954908 Pectobacterium wasabiae WPP163 8530197 YP_003259193.1 CDS Pecwa_1800 NC_013421.1 1954915 1955688 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1402 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 1954915..1955688 Pectobacterium wasabiae WPP163 8530198 YP_003259194.1 CDS Pecwa_1801 NC_013421.1 1955685 1956488 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1530 taurine transport ATP-binding protein; ABC transporter 1955685..1956488 Pectobacterium wasabiae WPP163 8530199 YP_003259195.1 CDS Pecwa_1802 NC_013421.1 1956510 1957523 D catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 1956510..1957523 Pectobacterium wasabiae WPP163 8530200 YP_003259196.1 CDS Pecwa_1803 NC_013421.1 1957520 1958236 D TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: eca:ECA1532 aspartate racemase; aspartate racemase 1957520..1958236 Pectobacterium wasabiae WPP163 8530201 YP_003259197.1 CDS Pecwa_1807 NC_013421.1 1961560 1962825 D KEGG: pfs:PFLU0454 hypothetical protein; hypothetical protein 1961560..1962825 Pectobacterium wasabiae WPP163 8530205 YP_003259198.1 CDS Pecwa_1808 NC_013421.1 1962825 1963538 D KEGG: ech:ECH_0329 hypothetical protein; hypothetical protein 1962825..1963538 Pectobacterium wasabiae WPP163 8530206 YP_003259199.1 CDS Pecwa_1809 NC_013421.1 1963525 1963980 D hypothetical protein 1963525..1963980 Pectobacterium wasabiae WPP163 8530207 YP_003259200.1 CDS Pecwa_1810 NC_013421.1 1964097 1964360 D PFAM: PAAR repeat-containing protein; KEGG: rso:RS01943 hypothetical protein; PAAR repeat-containing protein 1964097..1964360 Pectobacterium wasabiae WPP163 8530208 YP_003259201.1 CDS Pecwa_1811 NC_013421.1 1964463 1964792 D hypothetical protein 1964463..1964792 Pectobacterium wasabiae WPP163 8530209 YP_003259202.1 CDS Pecwa_1812 NC_013421.1 1965242 1965352 R KEGG: sbp:Sbal223_3248 hypothetical protein; hypothetical protein complement(1965242..1965352) Pectobacterium wasabiae WPP163 8530210 YP_003259203.1 CDS Pecwa_1813 NC_013421.1 1965407 1966747 R functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter complement(1965407..1966747) Pectobacterium wasabiae WPP163 8530211 YP_003259204.1 CDS Pecwa_1814 NC_013421.1 1967625 1970303 R TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pct:PC1_1411 TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent heme/hemoglobin receptor family protein complement(1967625..1970303) Pectobacterium wasabiae WPP163 8530212 YP_003259205.1 CDS Pecwa_1815 NC_013421.1 1970581 1971534 R PFAM: FecR protein; KEGG: eca:ECA1539 transmembrane sensor protein; anti-FecI sigma factor FecR complement(1970581..1971534) Pectobacterium wasabiae WPP163 8530213 YP_003259206.1 CDS Pecwa_1816 NC_013421.1 1971634 1972143 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: eca:ECA1540 ECF sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(1971634..1972143) Pectobacterium wasabiae WPP163 8530214 YP_003259207.1 CDS Pecwa_1817 NC_013421.1 1972394 1972555 D KEGG: eca:ECA1541 hypothetical protein; hypothetical protein 1972394..1972555 Pectobacterium wasabiae WPP163 8530215 YP_003259208.1 CDS Pecwa_1818 NC_013421.1 1972676 1974100 D catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 1972676..1974100 Pectobacterium wasabiae WPP163 8530216 YP_003259209.1 CDS Pecwa_1819 NC_013421.1 1974404 1975837 D catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; putrescine--2-oxoglutarate aminotransferase 1974404..1975837 Pectobacterium wasabiae WPP163 8530217 YP_003259210.1 CDS Pecwa_1820 NC_013421.1 1976689 1978350 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pct:PC1_1417 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1976689..1978350 Pectobacterium wasabiae WPP163 8530218 YP_003259211.1 CDS Pecwa_1821 NC_013421.1 1978592 1979578 R PFAM: methyltransferase type 12; methyltransferase type 11; O-methyltransferase family 2; KEGG: eca:ECA1544 methyltransferase; methyltransferase type 12 complement(1978592..1979578) Pectobacterium wasabiae WPP163 8530219 YP_003259212.1 CDS Pecwa_1822 NC_013421.1 1979701 1980636 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA1545 AraC family transcriptional regulator; AraC family transcriptional regulator 1979701..1980636 Pectobacterium wasabiae WPP163 8530220 YP_003259213.1 CDS Pecwa_1823 NC_013421.1 1980760 1982220 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(1980760..1982220) Pectobacterium wasabiae WPP163 8530221 YP_003259214.1 CDS Pecwa_1824 NC_013421.1 1982356 1984134 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1424 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(1982356..1984134) Pectobacterium wasabiae WPP163 8530222 YP_003259215.1 CDS Pecwa_1825 NC_013421.1 1984172 1985680 R PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_1425 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(1984172..1985680) Pectobacterium wasabiae WPP163 8530223 YP_003259216.1 CDS Pecwa_1826 NC_013421.1 1985691 1986938 R PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1426 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1985691..1986938) Pectobacterium wasabiae WPP163 8530224 YP_003259217.1 CDS Pecwa_1827 NC_013421.1 1987039 1987857 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1551 ABC transporter ATP binding protein; ABC transporter complement(1987039..1987857) Pectobacterium wasabiae WPP163 8530225 YP_003259218.1 CDS Pecwa_1828 NC_013421.1 1987854 1988759 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1552 ABC transporter ATP-binding protein; ABC transporter complement(1987854..1988759) Pectobacterium wasabiae WPP163 8530226 YP_003259219.1 CDS Pecwa_1830 NC_013421.1 1989669 1991462 R PFAM: thioredoxin domain; KEGG: eca:ECA1555 hypothetical protein; thioredoxin complement(1989669..1991462) Pectobacterium wasabiae WPP163 8530228 YP_003259220.1 CDS Pecwa_1831 NC_013421.1 1991486 1992286 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_1431 ABC transporter; ABC transporter complement(1991486..1992286) Pectobacterium wasabiae WPP163 8530229 YP_003259221.1 CDS Pecwa_1832 NC_013421.1 1992283 1993884 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1432 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(1992283..1993884) Pectobacterium wasabiae WPP163 8530230 YP_003259222.1 CDS Pecwa_1833 NC_013421.1 1994122 1995252 D KEGG: eca:ECA1558 sulfate ester transporter periplasmic binding component; sulfate ester transporter periplasmic binding component 1994122..1995252 Pectobacterium wasabiae WPP163 8530231 YP_003259223.1 CDS Pecwa_1834 NC_013421.1 1995263 1996201 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1559 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1995263..1996201) Pectobacterium wasabiae WPP163 8530232 YP_003259224.1 CDS Pecwa_1835 NC_013421.1 1996338 1997090 R PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: pct:PC1_1435 CDP-diacylglycerol diphosphatase; CDP-diacylglycerol pyrophosphatase complement(1996338..1997090) Pectobacterium wasabiae WPP163 8530233 YP_003259225.1 CDS Pecwa_1836 NC_013421.1 1997414 1998151 R PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: eca:ECA1561 quorum-sensing transcriptional regulator; LuxR family transcriptional regulator complement(1997414..1998151) Pectobacterium wasabiae WPP163 8530234 YP_003259226.1 CDS Pecwa_1837 NC_013421.1 1998717 1998821 R hypothetical protein complement(1998717..1998821) Pectobacterium wasabiae WPP163 8530235 YP_003259227.1 CDS Pecwa_1838 NC_013421.1 1999238 2000203 D PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: pct:PC1_1449 response regulator receiver modulated CheW protein; response regulator receiver modulated CheW protein 1999238..2000203 Pectobacterium wasabiae WPP163 8530236 YP_003259228.1 CDS Pecwa_1839 NC_013421.1 2000347 2002458 R Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA complement(2000347..2002458) Pectobacterium wasabiae WPP163 8530237 YP_003259229.1 CDS Pecwa_1840 NC_013421.1 2002717 2003964 R PFAM: regulatory protein TetR; KEGG: pct:PC1_1451 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2002717..2003964) Pectobacterium wasabiae WPP163 8530238 YP_003259230.1 CDS Pecwa_1841 NC_013421.1 2004088 2005344 D TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1452 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 2004088..2005344 Pectobacterium wasabiae WPP163 8530239 YP_003259231.1 CDS Pecwa_1842 NC_013421.1 2005391 2006230 R YghU; B2989; one of eight glutathione transferase proteins from E. coli; glutathione S-transferase complement(2005391..2006230) Pectobacterium wasabiae WPP163 8530240 YP_003259232.1 CDS Pecwa_1844 NC_013421.1 2006617 2007621 R PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: eca:ECA1571 threonine dehydratase catabolic; pyridoxal-5'-phosphate-dependent protein subunit beta complement(2006617..2007621) Pectobacterium wasabiae WPP163 8530242 YP_003259233.1 CDS Pecwa_1845 NC_013421.1 2007674 2008024 D SMART: regulatory protein ArsR; KEGG: eca:ECA1572 transcription regulator ArsR; ArsR family transcriptional regulator 2007674..2008024 Pectobacterium wasabiae WPP163 8530243 YP_003259234.1 CDS Pecwa_1846 NC_013421.1 2008503 2008721 R KEGG: eca:ECA2847 hypothetical protein; hypothetical protein complement(2008503..2008721) Pectobacterium wasabiae WPP163 8530244 YP_003259235.1 CDS Pecwa_1847 NC_013421.1 2008998 2010410 R KEGG: pct:PC1_2619 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2008998..2010410) Pectobacterium wasabiae WPP163 8530245 YP_003259236.1 CDS Pecwa_1848 NC_013421.1 2010602 2010805 D PFAM: dextransucrase DSRB; KEGG: eca:ECA1682 hypothetical protein; hypothetical protein 2010602..2010805 Pectobacterium wasabiae WPP163 8530246 YP_003259237.1 CDS Pecwa_1849 NC_013421.1 2010874 2012586 R PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; KEGG: pct:PC1_2617 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2010874..2012586) Pectobacterium wasabiae WPP163 8530247 YP_003259238.1 CDS Pecwa_1850 NC_013421.1 2012905 2013831 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: pct:PC1_2616 hypothetical protein; hypothetical protein 2012905..2013831 Pectobacterium wasabiae WPP163 8530248 YP_003259239.1 CDS Pecwa_1851 NC_013421.1 2014599 2014949 D with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 2014599..2014949 Pectobacterium wasabiae WPP163 8530249 YP_003259240.1 CDS Pecwa_1852 NC_013421.1 2014952 2015530 D With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 2014952..2015530 Pectobacterium wasabiae WPP163 8530250 YP_003259241.1 CDS Pecwa_1853 NC_013421.1 2015666 2016553 D With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 2015666..2016553 Pectobacterium wasabiae WPP163 8530251 YP_003259242.1 CDS Pecwa_1854 NC_013421.1 2016550 2017602 D PFAM: OmpA/MotB domain protein; KEGG: pct:PC1_2612 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 2016550..2017602 Pectobacterium wasabiae WPP163 8530252 YP_003259243.1 CDS Pecwa_1855 NC_013421.1 2017642 2019630 D chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA 2017642..2019630 Pectobacterium wasabiae WPP163 8530253 YP_003259244.1 CDS Pecwa_1856 NC_013421.1 2019662 2020159 D PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: pct:PC1_2610 CheW protein; purine-binding chemotaxis protein 2019662..2020159 Pectobacterium wasabiae WPP163 8530254 YP_003259245.1 CDS Pecwa_1857 NC_013421.1 2020294 2021979 D PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; KEGG: pct:PC1_2609 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2020294..2021979 Pectobacterium wasabiae WPP163 8530255 YP_003259246.1 CDS Pecwa_1858 NC_013421.1 2022471 2023343 D methylates the MCP; chemotaxis methyltransferase CheR 2022471..2023343 Pectobacterium wasabiae WPP163 8530256 YP_003259247.1 CDS Pecwa_1859 NC_013421.1 2023343 2024395 D regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 2023343..2024395 Pectobacterium wasabiae WPP163 8530257 YP_003259248.1 CDS Pecwa_1860 NC_013421.1 2024434 2024823 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pct:PC1_2606 response regulator receiver protein; response regulator receiver protein 2024434..2024823 Pectobacterium wasabiae WPP163 8530258 YP_003259249.1 CDS Pecwa_1861 NC_013421.1 2024833 2025477 D cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 2024833..2025477 Pectobacterium wasabiae WPP163 8530259 YP_003259250.1 CDS flhB NC_013421.1 2025723 2026874 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 2025723..2026874 Pectobacterium wasabiae WPP163 8530260 YP_003259251.1 CDS flhA NC_013421.1 2026867 2028948 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 2026867..2028948 Pectobacterium wasabiae WPP163 8530261 YP_003259252.1 CDS Pecwa_1864 NC_013421.1 2028948 2029367 D PFAM: flagellar FlhE family protein; KEGG: eca:ECA1698 flagellar protein; flagellar FlhE family protein 2028948..2029367 Pectobacterium wasabiae WPP163 8530262 YP_003259253.1 CDS Pecwa_1865 NC_013421.1 2029443 2029880 R PFAM: FlgN family protein; KEGG: pct:PC1_2601 FlgN family protein; FlgN family protein complement(2029443..2029880) Pectobacterium wasabiae WPP163 8530263 YP_003259254.1 CDS Pecwa_1866 NC_013421.1 2029886 2030182 R regulates the flagellar specific sigma28 transcription factor; anti-sigma-28 factor FlgM complement(2029886..2030182) Pectobacterium wasabiae WPP163 8530264 YP_003259255.1 CDS flgA NC_013421.1 2030324 2030992 R required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA complement(2030324..2030992) Pectobacterium wasabiae WPP163 8530265 YP_003259256.1 CDS flgB NC_013421.1 2031157 2031573 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 2031157..2031573 Pectobacterium wasabiae WPP163 8530266 YP_003259257.1 CDS flgC NC_013421.1 2031602 2032006 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 2031602..2032006 Pectobacterium wasabiae WPP163 8530267 YP_003259258.1 CDS flgD NC_013421.1 2032022 2032696 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 2032022..2032696 Pectobacterium wasabiae WPP163 8530268 YP_003259259.1 CDS flgE NC_013421.1 2032772 2033989 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 2032772..2033989 Pectobacterium wasabiae WPP163 8530269 YP_003259260.1 CDS flgF NC_013421.1 2034011 2034766 D FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 2034011..2034766 Pectobacterium wasabiae WPP163 8530270 YP_003259261.1 CDS flgG NC_013421.1 2034794 2035576 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 2034794..2035576 Pectobacterium wasabiae WPP163 8530271 YP_003259262.1 CDS flgH NC_013421.1 2035759 2036472 D part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 2035759..2036472 Pectobacterium wasabiae WPP163 8530272 YP_003259263.1 CDS flgI NC_013421.1 2036489 2037598 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 2036489..2037598 Pectobacterium wasabiae WPP163 8530273 YP_003259264.1 CDS flgJ NC_013421.1 2037598 2038560 D Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 2037598..2038560 Pectobacterium wasabiae WPP163 8530274 YP_003259265.1 CDS flgK NC_013421.1 2038686 2040356 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 2038686..2040356 Pectobacterium wasabiae WPP163 8530275 YP_003259266.1 CDS flgL NC_013421.1 2040391 2041347 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; flagellar hook-associated protein FlgL 2040391..2041347 Pectobacterium wasabiae WPP163 8530276 YP_003259267.1 CDS fliR NC_013421.1 2041753 2042538 R FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR complement(2041753..2042538) Pectobacterium wasabiae WPP163 8530277 YP_003259268.1 CDS fliQ NC_013421.1 2042541 2042810 R with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ complement(2042541..2042810) Pectobacterium wasabiae WPP163 8530278 YP_003259269.1 CDS fliP NC_013421.1 2042823 2043599 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(2042823..2043599) Pectobacterium wasabiae WPP163 8530279 YP_003259270.1 CDS Pecwa_1882 NC_013421.1 2043596 2044018 R TIGRFAM: flagellar biosynthetic protein FliO; PFAM: flagellar biosynthesis protein FliO; KEGG: eca:ECA1717 flagellar protein; flagellar biosynthetic protein FliO complement(2043596..2044018) Pectobacterium wasabiae WPP163 8530280 YP_003259271.1 CDS fliN NC_013421.1 2044018 2044431 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliN complement(2044018..2044431) Pectobacterium wasabiae WPP163 8530281 YP_003259272.1 CDS fliM NC_013421.1 2044424 2045437 R with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM complement(2044424..2045437) Pectobacterium wasabiae WPP163 8530282 YP_003259273.1 CDS fliL NC_013421.1 2045443 2045928 R interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL complement(2045443..2045928) Pectobacterium wasabiae WPP163 8530283 YP_003259274.1 CDS Pecwa_1886 NC_013421.1 2046078 2047370 R PFAM: flagellar hook-length control protein; KEGG: eca:ECA1721 flagellar hook-length control protein; flagellar hook-length control protein complement(2046078..2047370) Pectobacterium wasabiae WPP163 8530284 YP_003259275.1 CDS fliJ NC_013421.1 2047367 2047813 R rod/hook and filament chaperone; flagellar biosynthesis chaperone complement(2047367..2047813) Pectobacterium wasabiae WPP163 8530285 YP_003259276.1 CDS fliI NC_013421.1 2047822 2049192 R involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase complement(2047822..2049192) Pectobacterium wasabiae WPP163 8530286 YP_003259277.1 CDS fliH NC_013421.1 2049192 2049914 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(2049192..2049914) Pectobacterium wasabiae WPP163 8530287 YP_003259278.1 CDS fliG NC_013421.1 2049907 2050899 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(2049907..2050899) Pectobacterium wasabiae WPP163 8530288 YP_003259279.1 CDS fliF NC_013421.1 2050896 2052605 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(2050896..2052605) Pectobacterium wasabiae WPP163 8530289 YP_003259280.1 CDS fliE NC_013421.1 2052863 2053177 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 2052863..2053177 Pectobacterium wasabiae WPP163 8530290 YP_003259281.1 CDS Pecwa_1893 NC_013421.1 2053273 2053608 R binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; flagellar biosynthesis protein FliT complement(2053273..2053608) Pectobacterium wasabiae WPP163 8530291 YP_003259282.1 CDS fliS NC_013421.1 2053610 2054017 R flagellin specific chaperone; flagellar protein FliS complement(2053610..2054017) Pectobacterium wasabiae WPP163 8530292 YP_003259283.1 CDS Pecwa_1895 NC_013421.1 2054032 2055471 R PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: ypb:YPTS_1841 flagellar capping protein; flagellar hook-associated 2 domain-containing protein complement(2054032..2055471) Pectobacterium wasabiae WPP163 8530293 YP_003259284.1 CDS Pecwa_1896 NC_013421.1 2055744 2057012 D PFAM: flagellin domain protein; KEGG: reh:H16_B2360 flagellin; flagellin domain-containing protein 2055744..2057012 Pectobacterium wasabiae WPP163 8530294 YP_003259285.1 CDS Pecwa_1897 NC_013421.1 2057393 2059087 D PFAM: methyltransferase regulatory domain, predicted; methyltransferase type 12; methyltransferase type 11; KEGG: bav:BAV1666 hypothetical protein; methyltransferase regulatory domain 2057393..2059087 Pectobacterium wasabiae WPP163 8530295 YP_003259286.1 CDS fliA NC_013421.1 2059246 2059968 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 2059246..2059968 Pectobacterium wasabiae WPP163 8530296 YP_003259287.1 CDS Pecwa_1899 NC_013421.1 2060164 2060679 D expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; flagella biosynthesis protein FliZ 2060164..2060679 Pectobacterium wasabiae WPP163 8530297 YP_003259288.1 CDS Pecwa_1900 NC_013421.1 2061414 2062202 D PFAM: PhoH family protein; KEGG: eca:ECA1741 hypothetical protein; hypothetical protein 2061414..2062202 Pectobacterium wasabiae WPP163 8530298 YP_003259289.1 CDS Pecwa_1902 NC_013421.1 2062737 2063987 R PFAM: integrase; KEGG: eca:ECA2750 prophage integrase; integrase complement(2062737..2063987) Pectobacterium wasabiae WPP163 8530300 YP_003259290.1 CDS Pecwa_1903 NC_013421.1 2064330 2066078 R PFAM: sulfatase; KEGG: eca:ECA2749 sulphatase; sulfatase complement(2064330..2066078) Pectobacterium wasabiae WPP163 8530302 YP_003259291.1 CDS Pecwa_1904 NC_013421.1 2066093 2066323 R PFAM: protein of unknown function DUF1414; KEGG: eca:ECA2748 hypothetical protein; hypothetical protein complement(2066093..2066323) Pectobacterium wasabiae WPP163 8530303 YP_003259292.1 CDS Pecwa_1905 NC_013421.1 2066542 2067552 D PFAM: 37kDa nucleoid-associated protein; KEGG: eca:ECA2747 nucleoid-associated protein NdpA; nucleoid-associated protein NdpA 2066542..2067552 Pectobacterium wasabiae WPP163 8530304 YP_003259293.1 CDS Pecwa_1906 NC_013421.1 2067608 2068756 R KEGG: eca:ECA2746 hypothetical protein; hypothetical protein complement(2067608..2068756) Pectobacterium wasabiae WPP163 8530305 YP_003259294.1 CDS Pecwa_1907 NC_013421.1 2068856 2069140 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(2068856..2069140) Pectobacterium wasabiae WPP163 8530306 YP_003259295.1 CDS Pecwa_1908 NC_013421.1 2069548 2071308 R PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD/DEAH box helicase ; helicase; KEGG: eca:ECA2744 helicase; type III restriction protein res subunit complement(2069548..2071308) Pectobacterium wasabiae WPP163 8530307 YP_003259296.1 CDS Pecwa_1909 NC_013421.1 2071311 2071550 R PFAM: protein of unknown function DUF2492; KEGG: eca:ECA2743 hypothetical protein; hypothetical protein complement(2071311..2071550) Pectobacterium wasabiae WPP163 8530308 YP_003259297.1 CDS Pecwa_1910 NC_013421.1 2071764 2072459 D catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A 2071764..2072459 Pectobacterium wasabiae WPP163 8530309 YP_003259298.1 CDS Pecwa_1911 NC_013421.1 2072500 2073690 D Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system protein 2072500..2073690 Pectobacterium wasabiae WPP163 8530310 YP_003259299.1 CDS Pecwa_1912 NC_013421.1 2074073 2074417 D KEGG: eca:ECA2740 hypothetical protein; hypothetical protein 2074073..2074417 Pectobacterium wasabiae WPP163 8530311 YP_003259300.1 CDS Pecwa_1913 NC_013421.1 2074482 2076074 R PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2739 ABC-transporter ATP-binding protein; ABC transporter complement(2074482..2076074) Pectobacterium wasabiae WPP163 8530312 YP_003259301.1 CDS Pecwa_1914 NC_013421.1 2076076 2077101 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2738 ABC transporter permease; binding-protein-dependent transporters inner membrane component complement(2076076..2077101) Pectobacterium wasabiae WPP163 8530313 YP_003259302.1 CDS Pecwa_1915 NC_013421.1 2077101 2078195 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1644 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(2077101..2078195) Pectobacterium wasabiae WPP163 8530314 YP_003259303.1 CDS Pecwa_1916 NC_013421.1 2078205 2080013 R PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_1645 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(2078205..2080013) Pectobacterium wasabiae WPP163 8530315 YP_003259304.1 CDS spr NC_013421.1 2080377 2080958 R by similarity, Spr seems to have peptidase activity; involved in thermoresistance; outer membrane lipoprotein complement(2080377..2080958) Pectobacterium wasabiae WPP163 8530316 YP_003259305.1 CDS Pecwa_1918 NC_013421.1 2081282 2081983 R PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: eca:ECA2734 membrane-bound phosphatase; phosphoesterase PA-phosphatase-like protein complement(2081282..2081983) Pectobacterium wasabiae WPP163 8530317 YP_003259306.1 CDS Pecwa_1919 NC_013421.1 2082020 2083006 R PFAM: cobalamin synthesis protein P47K; KEGG: pct:PC1_1648 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(2082020..2083006) Pectobacterium wasabiae WPP163 8530318 YP_003259307.1 CDS Pecwa_1920 NC_013421.1 2083094 2083666 R Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; elongation factor P complement(2083094..2083666) Pectobacterium wasabiae WPP163 8530319 YP_003259308.1 CDS Pecwa_1921 NC_013421.1 2083830 2084084 D PFAM: protein of unknown function UPF0153; KEGG: eca:ECA2731 hypothetical protein; hypothetical protein 2083830..2084084 Pectobacterium wasabiae WPP163 8530320 YP_003259309.1 CDS Pecwa_1922 NC_013421.1 2084095 2085273 R TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2730 sugar efflux transporter; sugar efflux transporter complement(2084095..2085273) Pectobacterium wasabiae WPP163 8530321 YP_003259310.1 CDS Pecwa_1923 NC_013421.1 2085452 2085553 R hypothetical protein complement(2085452..2085553) Pectobacterium wasabiae WPP163 8530322 YP_003259311.1 CDS Pecwa_1924 NC_013421.1 2085607 2086740 D phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 2085607..2086740 Pectobacterium wasabiae WPP163 8530323 YP_003259312.1 CDS fruK NC_013421.1 2086737 2087675 D converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase 2086737..2087675 Pectobacterium wasabiae WPP163 8530324 YP_003259313.1 CDS Pecwa_1926 NC_013421.1 2087694 2089385 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunit IIBC 2087694..2089385 Pectobacterium wasabiae WPP163 8530325 YP_003259314.1 CDS Pecwa_1927 NC_013421.1 2089531 2090376 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(2089531..2090376) Pectobacterium wasabiae WPP163 8530326 YP_003259315.1 CDS Pecwa_1928 NC_013421.1 2090672 2091544 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_1657 LysR family transcriptional regulator; DNA-binding transcriptional regulator 2090672..2091544 Pectobacterium wasabiae WPP163 8530327 YP_003259316.1 CDS Pecwa_1929 NC_013421.1 2091680 2093155 D PFAM: amino acid permease-associated region; KEGG: eca:ECA2723 lysine transporter; lysine transporter 2091680..2093155 Pectobacterium wasabiae WPP163 8530328 YP_003259317.1 CDS Pecwa_1930 NC_013421.1 2093497 2095605 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eca:ECA2722 exogenous ferric siderophore TonB-dependent receptor; TonB-dependent receptor 2093497..2095605 Pectobacterium wasabiae WPP163 8530329 YP_003259318.1 CDS Pecwa_1931 NC_013421.1 2096053 2097021 D Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; glycerate dehydrogenase 2096053..2097021 Pectobacterium wasabiae WPP163 8530330 YP_003259319.1 CDS Pecwa_1932 NC_013421.1 2097627 2098622 R PFAM: inner-membrane translocator; KEGG: eca:ECA2720 ABC transporter permease; inner-membrane translocator complement(2097627..2098622) Pectobacterium wasabiae WPP163 8530331 YP_003259320.1 CDS Pecwa_1933 NC_013421.1 2098619 2100130 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_1662 ABC transporter; ABC transporter complement(2098619..2100130) Pectobacterium wasabiae WPP163 8530332 YP_003259321.1 CDS Pecwa_1934 NC_013421.1 2100398 2101486 D member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 2100398..2101486 Pectobacterium wasabiae WPP163 8530333 YP_003259322.1 CDS Pecwa_1935 NC_013421.1 2101528 2101740 R KEGG: pct:PC1_1664 hypothetical protein; hypothetical protein complement(2101528..2101740) Pectobacterium wasabiae WPP163 8530334 YP_003259323.1 CDS Pecwa_1936 NC_013421.1 2101961 2102605 R PFAM: glutathione S-transferase domain; KEGG: pct:PC1_1665 glutathione S-transferase; glutathione S-transferase complement(2101961..2102605) Pectobacterium wasabiae WPP163 8530335 YP_003259324.1 CDS Pecwa_1937 NC_013421.1 2102771 2103613 R KEGG: pct:PC1_1666 S-formylglutathione hydrolase; TIGRFAM: S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase complement(2102771..2103613) Pectobacterium wasabiae WPP163 8530336 YP_003259325.1 CDS Pecwa_1938 NC_013421.1 2103653 2104774 R TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: alcohol dehydrogenase GroES; alcohol dehydrogenase zinc-binding domain protein; KEGG: pct:PC1_1667 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(2103653..2104774) Pectobacterium wasabiae WPP163 8530337 YP_003259326.1 CDS Pecwa_1939 NC_013421.1 2104886 2105758 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2713 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2104886..2105758) Pectobacterium wasabiae WPP163 8530338 YP_003259327.1 CDS Pecwa_1940 NC_013421.1 2106460 2108142 D PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: eca:ECA2712 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2106460..2108142 Pectobacterium wasabiae WPP163 8530339 YP_003259328.1 CDS folE NC_013421.1 2108476 2109138 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2108476..2109138 Pectobacterium wasabiae WPP163 8530340 YP_003259329.1 CDS Pecwa_1942 NC_013421.1 2109277 2110452 D PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: eca:ECA2710 hypothetical protein; hypothetical protein 2109277..2110452 Pectobacterium wasabiae WPP163 8530341 YP_003259330.1 CDS Pecwa_1943 NC_013421.1 2110462 2111241 R PFAM: protein of unknown function DUF218; KEGG: pct:PC1_1672 hypothetical protein; hypothetical protein complement(2110462..2111241) Pectobacterium wasabiae WPP163 8530342 YP_003259331.1 CDS rimO NC_013421.1 2111422 2112735 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase complement(2111422..2112735) Pectobacterium wasabiae WPP163 8530343 YP_003259332.1 CDS Pecwa_1945 NC_013421.1 2112959 2114125 D PFAM: glucose sorbosone dehydrogenase; KEGG: eca:ECA2691 hypothetical protein; glucose sorbosone dehydrogenase 2112959..2114125 Pectobacterium wasabiae WPP163 8530344 YP_003259333.1 CDS Pecwa_1946 NC_013421.1 2114158 2114775 R PFAM: glutathione S-transferase domain; KEGG: eca:ECA2690 glutathione S-transferase; glutathione S-transferase complement(2114158..2114775) Pectobacterium wasabiae WPP163 8530345 YP_003259334.1 CDS Pecwa_1947 NC_013421.1 2114918 2115763 D PFAM: NLPA lipoprotein; KEGG: eca:ECA2689 lipoprotein; NLPA lipoprotein 2114918..2115763 Pectobacterium wasabiae WPP163 8530346 YP_003259335.1 CDS Pecwa_1949 NC_013421.1 2116596 2117801 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: pct:PC1_1683 beta-lactamase; beta-lactamase 2116596..2117801 Pectobacterium wasabiae WPP163 8530348 YP_003259336.1 CDS Pecwa_1950 NC_013421.1 2117798 2118571 R PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: eca:ECA2685 DeoR family transcriptional regulator; DeoR family transcriptional regulator complement(2117798..2118571) Pectobacterium wasabiae WPP163 8530349 YP_003259337.1 CDS Pecwa_1951 NC_013421.1 2118603 2119271 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(2118603..2119271) Pectobacterium wasabiae WPP163 8530350 YP_003259338.1 CDS Pecwa_1952 NC_013421.1 2119817 2121505 R TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; TrkA-C domain protein; KEGG: eca:ECA2683 hypothetical protein; hypothetical protein complement(2119817..2121505) Pectobacterium wasabiae WPP163 8530351 YP_003259339.1 CDS Pecwa_1953 NC_013421.1 2121943 2122314 D KEGG: eca:ECA2682 hypothetical protein; hypothetical protein 2121943..2122314 Pectobacterium wasabiae WPP163 8530352 YP_003259340.1 CDS grxA NC_013421.1 2122390 2122656 R functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin complement(2122390..2122656) Pectobacterium wasabiae WPP163 8530353 YP_003259341.1 CDS Pecwa_1955 NC_013421.1 2122897 2123616 D NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; nitroreductase A 2122897..2123616 Pectobacterium wasabiae WPP163 8530354 YP_003259342.1 CDS Pecwa_1956 NC_013421.1 2123633 2124544 D responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; ribosomal protein S6 modification protein 2123633..2124544 Pectobacterium wasabiae WPP163 8530355 YP_003259343.1 CDS Pecwa_1957 NC_013421.1 2124821 2125303 D PFAM: sensory transduction regulator, KEGG: eca:ECA2678 hypothetical protein; sensory transduction regulator 2124821..2125303 Pectobacterium wasabiae WPP163 8530356 YP_003259344.1 CDS Pecwa_1958 NC_013421.1 2125676 2126785 D PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2677 putrescine transporter subunit: periplasmic-binding component of ABC superfamily; putrescine ABC transporter periplasmic-binding protein 2125676..2126785 Pectobacterium wasabiae WPP163 8530357 YP_003259345.1 CDS potG NC_013421.1 2127115 2128248 D part of the PotFGHI ATP-dependent putrescine transporter; putrescine ABC transporter ATP-binding protein 2127115..2128248 Pectobacterium wasabiae WPP163 8530358 YP_003259346.1 CDS Pecwa_1960 NC_013421.1 2128263 2129237 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2675 putrescine transporter subunit: membrane component of ABC superfamily; putrescine ABC transporter membrane protein 2128263..2129237 Pectobacterium wasabiae WPP163 8530359 YP_003259347.1 CDS Pecwa_1961 NC_013421.1 2129234 2130079 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2674 putrescine transporter subunit: membrane component of ABC superfamily; putrescine ABC transporter membrane protein 2129234..2130079 Pectobacterium wasabiae WPP163 8530360 YP_003259348.1 CDS Pecwa_1962 NC_013421.1 2130288 2130740 D KEGG: eca:ECA2673 hypothetical protein; hypothetical protein 2130288..2130740 Pectobacterium wasabiae WPP163 8530361 YP_003259349.1 CDS rumB NC_013421.1 2130866 2131993 D RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 2130866..2131993 Pectobacterium wasabiae WPP163 8530362 YP_003259350.1 CDS Pecwa_1964 NC_013421.1 2132247 2132978 R KEGG: pct:PC1_1698 cationic amino acid ABC transporter periplasmic protein; TIGRFAM: cationic amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic protein complement(2132247..2132978) Pectobacterium wasabiae WPP163 8530363 YP_003259351.1 CDS artM NC_013421.1 2133310 2133978 R with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM complement(2133310..2133978) Pectobacterium wasabiae WPP163 8530364 YP_003259352.1 CDS Pecwa_1966 NC_013421.1 2133978 2134694 R with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ complement(2133978..2134694) Pectobacterium wasabiae WPP163 8530365 YP_003259353.1 CDS Pecwa_1967 NC_013421.1 2134706 2135437 R KEGG: pct:PC1_1701 cationic amino acid ABC transporter periplasmic protein; TIGRFAM: cationic amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic protein complement(2134706..2135437) Pectobacterium wasabiae WPP163 8530366 YP_003259354.1 CDS artP NC_013421.1 2135458 2136207 R With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit complement(2135458..2136207) Pectobacterium wasabiae WPP163 8530367 YP_003259355.1 CDS Pecwa_1969 NC_013421.1 2136387 2136710 D PFAM: protein of unknown function DUF74; KEGG: eca:ECA2666 hypothetical protein; hypothetical protein 2136387..2136710 Pectobacterium wasabiae WPP163 8530368 YP_003259356.1 CDS Pecwa_1970 NC_013421.1 2136732 2137595 D KEGG: eca:ECA2665 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 2136732..2137595 Pectobacterium wasabiae WPP163 8530369 YP_003259357.1 CDS Pecwa_1971 NC_013421.1 2137592 2139028 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: pct:PC1_1705 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2137592..2139028) Pectobacterium wasabiae WPP163 8530370 YP_003259358.1 CDS Pecwa_1972 NC_013421.1 2139187 2140212 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: eca:ECA2663 HCP oxidoreductase, NADH-dependent; HCP oxidoreductase complement(2139187..2140212) Pectobacterium wasabiae WPP163 8530371 YP_003259359.1 CDS Pecwa_1973 NC_013421.1 2140352 2142004 R catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase complement(2140352..2142004) Pectobacterium wasabiae WPP163 8530372 YP_003259360.1 CDS Pecwa_1974 NC_013421.1 2142193 2143095 R PFAM: protein of unknown function DUF340 membrane; KEGG: eca:ECA2661 hypothetical protein; hypothetical protein complement(2142193..2143095) Pectobacterium wasabiae WPP163 8530373 YP_003259361.1 CDS Pecwa_1975 NC_013421.1 2143326 2144990 D KEGG: pct:PC1_1709 hypothetical protein; hypothetical protein 2143326..2144990 Pectobacterium wasabiae WPP163 8530374 YP_003259362.1 CDS Pecwa_1976 NC_013421.1 2145105 2145326 R KEGG: eca:ECA2659 cold shock-like protein; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(2145105..2145326) Pectobacterium wasabiae WPP163 8530375 YP_003259363.1 CDS clpS NC_013421.1 2145875 2146195 D involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 2145875..2146195 Pectobacterium wasabiae WPP163 8530376 YP_003259364.1 CDS clpA NC_013421.1 2146225 2148498 D ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; ATP-dependent Clp protease ATP-binding subunit 2146225..2148498 Pectobacterium wasabiae WPP163 8530377 YP_003259365.1 CDS Pecwa_1979 NC_013421.1 2148610 2148990 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eca:ECA2705 phenazine antibiotic biosynthesis protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(2148610..2148990) Pectobacterium wasabiae WPP163 8530378 YP_003259366.1 CDS Pecwa_1980 NC_013421.1 2149375 2149566 D hypothetical protein 2149375..2149566 Pectobacterium wasabiae WPP163 8530379 YP_003259367.1 CDS infA NC_013421.1 2149576 2149794 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2149576..2149794) Pectobacterium wasabiae WPP163 8530380 YP_003259368.1 CDS aat NC_013421.1 2149908 2150612 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(2149908..2150612) Pectobacterium wasabiae WPP163 8530381 YP_003259369.1 CDS Pecwa_1983 NC_013421.1 2150647 2152386 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(2150647..2152386) Pectobacterium wasabiae WPP163 8530382 YP_003259370.1 CDS Pecwa_1984 NC_013421.1 2152386 2154152 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(2152386..2154152) Pectobacterium wasabiae WPP163 8530383 YP_003259371.1 CDS Pecwa_1985 NC_013421.1 2154390 2155352 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pct:PC1_1717 thioredoxin reductase; thioredoxin reductase complement(2154390..2155352) Pectobacterium wasabiae WPP163 8530384 YP_003259372.1 CDS Pecwa_1986 NC_013421.1 2155937 2156431 D mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transporter; leucine-responsive transcriptional regulator 2155937..2156431 Pectobacterium wasabiae WPP163 8530385 YP_003259373.1 CDS Pecwa_1987 NC_013421.1 2156546 2159983 D PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: pct:PC1_1719 cell divisionFtsK/SpoIIIE; cell division protein FtsK 2156546..2159983 Pectobacterium wasabiae WPP163 8530386 YP_003259374.1 CDS lolA NC_013421.1 2160232 2160843 D participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 2160232..2160843 Pectobacterium wasabiae WPP163 8530387 YP_003259375.1 CDS Pecwa_1989 NC_013421.1 2160851 2162194 D PFAM: ATPase AAA; magnesium chelatase ChlI subunit; SMART: ATPase AAA; KEGG: eca:ECA2645 recombination factor protein RarA; recombination factor protein RarA 2160851..2162194 Pectobacterium wasabiae WPP163 8530388 YP_003259376.1 CDS Pecwa_1990 NC_013421.1 2162298 2163593 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2162298..2163593 Pectobacterium wasabiae WPP163 8530389 YP_003259377.1 CDS Pecwa_1991 NC_013421.1 2163909 2165063 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2643 MFS family transporter protein; MFS family transporter protein 2163909..2165063 Pectobacterium wasabiae WPP163 8530390 YP_003259378.1 CDS Pecwa_1992 NC_013421.1 2165049 2165990 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2642 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2165049..2165990) Pectobacterium wasabiae WPP163 8530391 YP_003259379.1 CDS Pecwa_1993 NC_013421.1 2166264 2167595 D PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: eca:ECA2641 permease; cytosine/purines uracil thiamine allantoin permease 2166264..2167595 Pectobacterium wasabiae WPP163 8530392 YP_003259380.1 CDS Pecwa_1994 NC_013421.1 2167622 2168731 D PFAM: protein of unknown function DUF917; KEGG: eca:ECA2640 hypothetical protein; hypothetical protein 2167622..2168731 Pectobacterium wasabiae WPP163 8530393 YP_003259381.1 CDS Pecwa_1995 NC_013421.1 2168742 2170310 D PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein; KEGG: pct:PC1_1727 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 2168742..2170310 Pectobacterium wasabiae WPP163 8530394 YP_003259382.1 CDS pflA NC_013421.1 2170397 2171137 R activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 complement(2170397..2171137) Pectobacterium wasabiae WPP163 8530395 YP_003259383.1 CDS Pecwa_1997 NC_013421.1 2171407 2173689 R KEGG: eca:ECA2597 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase complement(2171407..2173689) Pectobacterium wasabiae WPP163 8530396 YP_003259384.1 CDS Pecwa_1998 NC_013421.1 2173746 2174606 R TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; KEGG: eca:ECA2596 formate transporter; formate transporter complement(2173746..2174606) Pectobacterium wasabiae WPP163 8530397 YP_003259385.1 CDS Pecwa_1999 NC_013421.1 2175034 2176797 R PFAM: protein of unknown function DUF181; KEGG: eca:ECA2595 hypothetical protein; hypothetical protein complement(2175034..2176797) Pectobacterium wasabiae WPP163 8530398 YP_003259386.1 CDS Pecwa_2000 NC_013421.1 2177186 2178271 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2177186..2178271 Pectobacterium wasabiae WPP163 8530399 YP_003259387.1 CDS Pecwa_2001 NC_013421.1 2178354 2179643 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2178354..2179643 Pectobacterium wasabiae WPP163 8530400 YP_003259388.1 CDS cmk NC_013421.1 2179853 2180530 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2179853..2180530 Pectobacterium wasabiae WPP163 8530401 YP_003259389.1 CDS rpsA NC_013421.1 2180623 2182320 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2180623..2182320 Pectobacterium wasabiae WPP163 8530402 YP_003259390.1 CDS ihfB NC_013421.1 2182412 2182696 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 2182412..2182696 Pectobacterium wasabiae WPP163 8530403 YP_003259391.1 CDS Pecwa_2005 NC_013421.1 2182813 2183445 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase complement(2182813..2183445) Pectobacterium wasabiae WPP163 8530404 YP_003259392.1 CDS Pecwa_2006 NC_013421.1 2183439 2184215 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(2183439..2184215) Pectobacterium wasabiae WPP163 8530405 YP_003259393.1 CDS Pecwa_2007 NC_013421.1 2184197 2184934 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(2184197..2184934) Pectobacterium wasabiae WPP163 8530406 YP_003259394.1 CDS hisH NC_013421.1 2184941 2185531 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(2184941..2185531) Pectobacterium wasabiae WPP163 8530407 YP_003259395.1 CDS Pecwa_2009 NC_013421.1 2185531 2186598 R catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase complement(2185531..2186598) Pectobacterium wasabiae WPP163 8530408 YP_003259396.1 CDS Pecwa_2010 NC_013421.1 2186614 2187687 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(2186614..2187687) Pectobacterium wasabiae WPP163 8530409 YP_003259397.1 CDS hisD NC_013421.1 2187684 2189012 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(2187684..2189012) Pectobacterium wasabiae WPP163 8530410 YP_003259398.1 CDS hisG NC_013421.1 2189018 2189917 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(2189018..2189917) Pectobacterium wasabiae WPP163 8530411 YP_003259399.1 CDS Pecwa_2013 NC_013421.1 2190389 2191231 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: eca:ECA2581 hypothetical protein; NAD-dependent epimerase/dehydratase 2190389..2191231 Pectobacterium wasabiae WPP163 8530412 YP_003259400.1 CDS Pecwa_2014 NC_013421.1 2191581 2193842 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: spe:Spro_4187 rhs element Vgr protein; ImpA family type VI secretion-associated protein 2191581..2193842 Pectobacterium wasabiae WPP163 8530413 YP_003259401.1 CDS Pecwa_2015 NC_013421.1 2193855 2194184 D KEGG: spe:Spro_4186 hypothetical protein; hypothetical protein 2193855..2194184 Pectobacterium wasabiae WPP163 8530414 YP_003259402.1 CDS Pecwa_2016 NC_013421.1 2194294 2194497 R hypothetical protein complement(2194294..2194497) Pectobacterium wasabiae WPP163 8530415 YP_003259403.1 CDS Pecwa_2017 NC_013421.1 2194859 2195017 D hypothetical protein 2194859..2195017 Pectobacterium wasabiae WPP163 8530416 YP_003259404.1 CDS Pecwa_2018 NC_013421.1 2195062 2197014 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA2580 methyl-accepting chemotaxis citrate transducer; methyl-accepting chemotaxis sensory transducer complement(2195062..2197014) Pectobacterium wasabiae WPP163 8530417 YP_003259405.1 CDS Pecwa_2019 NC_013421.1 2197298 2199232 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA2579 methyl-accepting chemotaxis citrate transducer; methyl-accepting chemotaxis sensory transducer complement(2197298..2199232) Pectobacterium wasabiae WPP163 8530418 YP_003259406.1 CDS Pecwa_2020 NC_013421.1 2199709 2200410 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pct:PC1_1748 response regulator receiver and unknown domain protein; response regulator receiver and unknown domain-containing protein complement(2199709..2200410) Pectobacterium wasabiae WPP163 8530419 YP_003259407.1 CDS Pecwa_2021 NC_013421.1 2200507 2202111 R PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pct:PC1_1749 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism complement(2200507..2202111) Pectobacterium wasabiae WPP163 8530420 YP_003259408.1 CDS Pecwa_2022 NC_013421.1 2202289 2202429 R hypothetical protein complement(2202289..2202429) Pectobacterium wasabiae WPP163 8530421 YP_003259409.1 CDS Pecwa_2023 NC_013421.1 2202529 2203887 D PFAM: citrate carrier protein; KEGG: pct:PC1_1750 citrate carrier protein; citrate carrier protein 2202529..2203887 Pectobacterium wasabiae WPP163 8530422 YP_003259410.1 CDS Pecwa_2024 NC_013421.1 2204018 2204902 D PFAM: fumarylacetoacetate hydrolase; KEGG: pct:PC1_1751 fumarylacetoacetate hydrolase; fumarylacetoacetate hydrolase 2204018..2204902 Pectobacterium wasabiae WPP163 8530423 YP_003259411.1 CDS Pecwa_2025 NC_013421.1 2204987 2206051 D KEGG: pct:PC1_1752 citrate lyase ligase; TIGRFAM: citrate lyase ligase; cytidyltransferase-related domain protein; PFAM: citrate lyase ligase domain protein; GCN5-related N-acetyltransferase; SMART: citrate lyase ligase domain protein; citrate lyase ligase 2204987..2206051 Pectobacterium wasabiae WPP163 8530424 YP_003259412.1 CDS Pecwa_2026 NC_013421.1 2206075 2206365 D acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 2206075..2206365 Pectobacterium wasabiae WPP163 8530425 YP_003259413.1 CDS Pecwa_2027 NC_013421.1 2206365 2207240 D KEGG: eca:ECA2572 citrate lyase beta chain; TIGRFAM: citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase; citrate lyase subunit beta 2206365..2207240 Pectobacterium wasabiae WPP163 8530426 YP_003259414.1 CDS Pecwa_2028 NC_013421.1 2207294 2208823 D KEGG: eca:ECA2571 citrate lyase alpha chain; TIGRFAM: citrate lyase subunit alpha; PFAM: citrate lyase subunit alpha; citrate lyase subunit alpha 2207294..2208823 Pectobacterium wasabiae WPP163 8530427 YP_003259415.1 CDS Pecwa_2029 NC_013421.1 2208850 2209377 D KEGG: eca:ECA2570 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; holo-ACP synthase CitX 2208850..2209377 Pectobacterium wasabiae WPP163 8530428 YP_003259416.1 CDS Pecwa_2030 NC_013421.1 2209355 2210260 D KEGG: pct:PC1_1757 triphosphoribosyl-dephospho-CoA synthase CitG; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase CitG 2209355..2210260 Pectobacterium wasabiae WPP163 8530429 YP_003259417.1 CDS Pecwa_2031 NC_013421.1 2210526 2211290 D PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: pct:PC1_1758 YcgR family protein; YcgR family protein 2210526..2211290 Pectobacterium wasabiae WPP163 8530430 YP_003259418.1 CDS Pecwa_2032 NC_013421.1 2211736 2211957 D KEGG: eca:ECA2567 hypothetical protein; hypothetical protein 2211736..2211957 Pectobacterium wasabiae WPP163 8530431 YP_003259419.1 CDS Pecwa_2033 NC_013421.1 2211947 2213326 D PFAM: amino acid permease-associated region; KEGG: pct:PC1_1760 amino acid permease-associated region; amino acid permease 2211947..2213326 Pectobacterium wasabiae WPP163 8530432 YP_003259420.1 CDS sbcB NC_013421.1 2213388 2214815 R Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I complement(2213388..2214815) Pectobacterium wasabiae WPP163 8530433 YP_003259421.1 CDS Pecwa_2035 NC_013421.1 2215079 2216029 D PFAM: periplasmic binding protein; KEGG: pct:PC1_1763 periplasmic binding protein; periplasmic binding protein 2215079..2216029 Pectobacterium wasabiae WPP163 8530434 YP_003259422.1 CDS Pecwa_2036 NC_013421.1 2216051 2217010 D PFAM: transporter permease; KEGG: pct:PC1_1764 transporter permease; transporter permease 2216051..2217010 Pectobacterium wasabiae WPP163 8530435 YP_003259423.1 CDS Pecwa_2037 NC_013421.1 2217000 2218007 D PFAM: transporter permease; KEGG: pct:PC1_1765 transporter permease; transporter permease 2217000..2218007 Pectobacterium wasabiae WPP163 8530436 YP_003259424.1 CDS Pecwa_2038 NC_013421.1 2218004 2218762 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2561 iron ABC transporter ATP-binding protein; ABC transporter 2218004..2218762 Pectobacterium wasabiae WPP163 8530437 YP_003259425.1 CDS Pecwa_2039 NC_013421.1 2219166 2219483 D PFAM: protein of unknown function DUF496; KEGG: pct:PC1_1767 hypothetical protein; hypothetical protein 2219166..2219483 Pectobacterium wasabiae WPP163 8530438 YP_003259426.1 CDS Pecwa_2040 NC_013421.1 2219769 2222060 D TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase; KEGG: pct:PC1_1768 DNA internalization-related competence protein ComEC/Rec2; hypothetical protein 2219769..2222060 Pectobacterium wasabiae WPP163 8530439 YP_003259427.1 CDS Pecwa_2041 NC_013421.1 2222098 2223846 D involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding/permease 2222098..2223846 Pectobacterium wasabiae WPP163 8530440 YP_003259428.1 CDS lpxK NC_013421.1 2223843 2224844 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2223843..2224844 Pectobacterium wasabiae WPP163 8530441 YP_003259429.1 CDS Pecwa_2043 NC_013421.1 2225049 2225231 D PFAM: protein of unknown function DUF343; KEGG: pct:PC1_1771 hypothetical protein; hypothetical protein 2225049..2225231 Pectobacterium wasabiae WPP163 8530442 YP_003259430.1 CDS Pecwa_2044 NC_013421.1 2225228 2225977 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2225228..2225977 Pectobacterium wasabiae WPP163 8530443 YP_003259431.1 CDS Pecwa_2045 NC_013421.1 2226280 2227593 D KEGG: eca:ECA2553 pectate lyase; pectate lyase 2226280..2227593 Pectobacterium wasabiae WPP163 8530444 YP_003259432.1 CDS Pecwa_2046 NC_013421.1 2227805 2228698 D KEGG: eca:ECA2552 hypothetical protein; hypothetical protein 2227805..2228698 Pectobacterium wasabiae WPP163 8530445 YP_003259433.1 CDS Pecwa_2047 NC_013421.1 2228650 2229498 R PFAM: protein of unknown function DUF218; KEGG: eca:ECA2551 hypothetical protein; hypothetical protein complement(2228650..2229498) Pectobacterium wasabiae WPP163 8530446 YP_003259434.1 CDS Pecwa_2048 NC_013421.1 2229666 2230451 D involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; metallothionein SmtA 2229666..2230451 Pectobacterium wasabiae WPP163 8530447 YP_003259435.1 CDS Pecwa_2049 NC_013421.1 2230448 2231773 D acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 2230448..2231773 Pectobacterium wasabiae WPP163 8530448 YP_003259436.1 CDS Pecwa_2050 NC_013421.1 2231754 2232476 D acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 2231754..2232476 Pectobacterium wasabiae WPP163 8530449 YP_003259437.1 CDS mukB NC_013421.1 2232530 2236969 D SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 2232530..2236969 Pectobacterium wasabiae WPP163 8530450 YP_003259438.1 CDS Pecwa_2052 NC_013421.1 2237361 2239088 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding protein; KEGG: eca:ECA2546 hypothetical protein; hypothetical protein 2237361..2239088 Pectobacterium wasabiae WPP163 8530451 YP_003259439.1 CDS Pecwa_2053 NC_013421.1 2239267 2239815 D PFAM: protein of unknown function DUF882; peptidase M15A; KEGG: eca:ECA2545 hypothetical protein; hypothetical protein 2239267..2239815 Pectobacterium wasabiae WPP163 8530452 YP_003259440.1 CDS Pecwa_2054 NC_013421.1 2239897 2240544 D PFAM: beta-lactamase; KEGG: pct:PC1_1782 beta-lactamase; beta-lactamase 2239897..2240544 Pectobacterium wasabiae WPP163 8530453 YP_003259441.1 CDS Pecwa_2055 NC_013421.1 2240638 2241828 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(2240638..2241828) Pectobacterium wasabiae WPP163 8530454 YP_003259442.1 CDS Pecwa_2056 NC_013421.1 2242135 2243241 R PFAM: porin; KEGG: eca:ECA2542 outer membrane protein; porin complement(2242135..2243241) Pectobacterium wasabiae WPP163 8530455 YP_003259443.1 CDS asnC NC_013421.1 2243537 2244937 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(2243537..2244937) Pectobacterium wasabiae WPP163 8530456 YP_003259444.1 CDS Pecwa_2058 NC_013421.1 2245131 2246336 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(2245131..2246336) Pectobacterium wasabiae WPP163 8530457 YP_003259445.1 CDS Pecwa_2059 NC_013421.1 2246390 2246500 D hypothetical protein 2246390..2246500 Pectobacterium wasabiae WPP163 8530458 YP_003259446.1 CDS pepN NC_013421.1 2246560 2249175 D TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: eca:ECA2539 aminopeptidase N; aminopeptidase N 2246560..2249175 Pectobacterium wasabiae WPP163 8530459 YP_003259447.1 CDS Pecwa_2061 NC_013421.1 2249379 2250389 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2249379..2250389 Pectobacterium wasabiae WPP163 8530460 YP_003259448.1 CDS Pecwa_2062 NC_013421.1 2250590 2251177 D PFAM: protein of unknown function DUF1379; KEGG: eca:ECA2537 hypothetical protein; hypothetical protein 2250590..2251177 Pectobacterium wasabiae WPP163 8530461 YP_003259449.1 CDS Pecwa_2063 NC_013421.1 2251221 2252324 R PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: eca:ECA2536 iron-sulfur binding protein; MOSC domain-containing protein complement(2251221..2252324) Pectobacterium wasabiae WPP163 8530462 YP_003259450.1 CDS rlmL NC_013421.1 2252438 2254555 D catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 2252438..2254555 Pectobacterium wasabiae WPP163 8530463 YP_003259451.1 CDS Pecwa_2065 NC_013421.1 2254559 2256469 D Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 2254559..2256469 Pectobacterium wasabiae WPP163 8530464 YP_003259452.1 CDS Pecwa_2066 NC_013421.1 2256571 2257917 D TIGRFAM: integral membrane protein, PqiA family; PFAM: paraquat-inducible protein A; KEGG: pct:PC1_1793 integral membrane protein, PqiA family; PqiA family integral membrane protein 2256571..2257917 Pectobacterium wasabiae WPP163 8530465 YP_003259453.1 CDS Pecwa_2067 NC_013421.1 2257904 2259544 D PFAM: hypothetical protein; KEGG: eca:ECA2532 paraquat-inducible protein B; paraquat-inducible protein B 2257904..2259544 Pectobacterium wasabiae WPP163 8530466 YP_003259454.1 CDS Pecwa_2068 NC_013421.1 2259544 2260110 D PFAM: protein of unknown function DUF330; KEGG: eca:ECA2531 lipoprotein; hypothetical protein 2259544..2260110 Pectobacterium wasabiae WPP163 8530467 YP_003259455.1 CDS Pecwa_2069 NC_013421.1 2260427 2260594 D PFAM: ribosome modulation factor; KEGG: pct:PC1_1796 ribosome modulation factor; ribosome modulation factor 2260427..2260594 Pectobacterium wasabiae WPP163 8530468 YP_003259456.1 CDS Pecwa_2070 NC_013421.1 2261004 2262563 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: pct:PC1_1797 methyl-accepting chemotaxis sensory transducer with cache sensor; methyl-accepting chemotaxis sensory transducer with Cache sensor 2261004..2262563 Pectobacterium wasabiae WPP163 8530469 YP_003259457.1 CDS Pecwa_2071 NC_013421.1 2262840 2262950 R hypothetical protein complement(2262840..2262950) Pectobacterium wasabiae WPP163 8530470 YP_003259458.1 CDS Pecwa_2072 NC_013421.1 2263622 2264863 R KEGG: bph:Bphy_6360 lipoprotein; hypothetical protein complement(2263622..2264863) Pectobacterium wasabiae WPP163 8530471 YP_003259459.1 CDS Pecwa_2073 NC_013421.1 2265002 2265775 R KEGG: pfo:Pfl01_3563 hypothetical protein; hypothetical protein complement(2265002..2265775) Pectobacterium wasabiae WPP163 8530472 YP_003259460.1 CDS Pecwa_2074 NC_013421.1 2265934 2266989 R KEGG: kpu:KP1_0602 hypothetical protein; hypothetical protein complement(2265934..2266989) Pectobacterium wasabiae WPP163 8530473 YP_003259461.1 CDS Pecwa_2075 NC_013421.1 2267732 2268469 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pct:PC1_1798 PHP domain protein; hydrolase 2267732..2268469 Pectobacterium wasabiae WPP163 8530475 YP_003259462.1 CDS Pecwa_2076 NC_013421.1 2268501 2269073 D PFAM: cytoplasmic chaperone TorD family protein; KEGG: eca:ECA2528 hypothetical protein; cytoplasmic chaperone TorD family protein 2268501..2269073 Pectobacterium wasabiae WPP163 8530476 YP_003259463.1 CDS Pecwa_2077 NC_013421.1 2269152 2269718 R PFAM: protein of unknown function DUF1439; KEGG: pct:PC1_1800 hypothetical protein; hypothetical protein complement(2269152..2269718) Pectobacterium wasabiae WPP163 8530477 YP_003259464.1 CDS Pecwa_2078 NC_013421.1 2269905 2270552 R cofactor involved in the reduction of disulfides; glutaredoxin complement(2269905..2270552) Pectobacterium wasabiae WPP163 8530478 YP_003259465.1 CDS Pecwa_2079 NC_013421.1 2270734 2271939 R Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH complement(2270734..2271939) Pectobacterium wasabiae WPP163 8530479 YP_003259466.1 CDS Pecwa_2080 NC_013421.1 2272255 2272839 D PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA2524 ribosomal-protein-S5-alanine N-acetyltransferase; ribosomal-protein-S5-alanine N-acetyltransferase 2272255..2272839 Pectobacterium wasabiae WPP163 8530480 YP_003259467.1 CDS Pecwa_2081 NC_013421.1 2272849 2273487 D PFAM: protein of unknown function DUF480; KEGG: eca:ECA2523 hypothetical protein; hypothetical protein 2272849..2273487 Pectobacterium wasabiae WPP163 8530481 YP_003259468.1 CDS Pecwa_2082 NC_013421.1 2273516 2274481 D PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: eca:ECA2522 virulence factor; oxidoreductase domain-containing protein 2273516..2274481 Pectobacterium wasabiae WPP163 8530482 YP_003259469.1 CDS Pecwa_2083 NC_013421.1 2274609 2276144 D TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: eca:ECA2521 virulence factor; integral membrane protein MviN 2274609..2276144 Pectobacterium wasabiae WPP163 8530483 YP_003259470.1 CDS argS NC_013421.1 2276245 2277975 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(2276245..2277975) Pectobacterium wasabiae WPP163 8530484 YP_003259471.1 CDS Pecwa_2085 NC_013421.1 2278637 2279185 D PFAM: protein of unknown function DUF991; KEGG: pct:PC1_1808 hypothetical protein; hypothetical protein 2278637..2279185 Pectobacterium wasabiae WPP163 8530485 YP_003259472.1 CDS Pecwa_2086 NC_013421.1 2279469 2280227 D PFAM: CutC family protein; KEGG: eca:ECA2518 copper homeostasis protein CutC; copper homeostasis protein CutC 2279469..2280227 Pectobacterium wasabiae WPP163 8530486 YP_003259473.1 CDS Pecwa_2087 NC_013421.1 2280383 2280619 R KEGG: eca:ECA2517 hypothetical protein; hypothetical protein complement(2280383..2280619) Pectobacterium wasabiae WPP163 8530487 YP_003259474.1 CDS Pecwa_2089 NC_013421.1 2281023 2281625 R KEGG: eca:ECA2516 hypothetical protein; hypothetical protein complement(2281023..2281625) Pectobacterium wasabiae WPP163 8530489 YP_003259475.1 CDS Pecwa_2090 NC_013421.1 2281639 2282223 R KEGG: eca:ECA2515 hypothetical protein; hypothetical protein complement(2281639..2282223) Pectobacterium wasabiae WPP163 8530490 YP_003259476.1 CDS Pecwa_2094 NC_013421.1 2283541 2284524 R TIGRFAM: methyltransferase; PFAM: methyltransferase KEGG: eca:ECA2512 hypothetical protein; methyltransferase complement(2283541..2284524) Pectobacterium wasabiae WPP163 8530494 YP_003259477.1 CDS Pecwa_2095 NC_013421.1 2284521 2285264 R TIGRFAM: methyltransferase; PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: pct:PC1_1811 methyltransferase; methyltransferase complement(2284521..2285264) Pectobacterium wasabiae WPP163 8530495 YP_003259478.1 CDS Pecwa_2096 NC_013421.1 2285616 2286011 R KEGG: pct:PC1_1812 hypothetical protein; hypothetical protein complement(2285616..2286011) Pectobacterium wasabiae WPP163 8530496 YP_003259479.1 CDS Pecwa_2097 NC_013421.1 2286166 2286978 R PFAM: protein of unknown function DUF72; KEGG: pct:PC1_1813 hypothetical protein; hypothetical protein complement(2286166..2286978) Pectobacterium wasabiae WPP163 8530497 YP_003259480.1 CDS Pecwa_2098 NC_013421.1 2287070 2288287 R PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: eca:ECA2497 signal transduction protein; diguanylate phosphodiesterase complement(2287070..2288287) Pectobacterium wasabiae WPP163 8530498 YP_003259481.1 CDS aspS NC_013421.1 2288833 2290629 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2288833..2290629 Pectobacterium wasabiae WPP163 8530499 YP_003259482.1 CDS ntpA NC_013421.1 2290631 2291074 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 2290631..2291074 Pectobacterium wasabiae WPP163 8530500 YP_003259483.1 CDS Pecwa_2101 NC_013421.1 2291098 2291841 D PFAM: protein of unknown function DUF28; KEGG: pct:PC1_1817 hypothetical protein; hypothetical protein 2291098..2291841 Pectobacterium wasabiae WPP163 8530501 YP_003259484.1 CDS ruvC NC_013421.1 2291939 2292460 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2291939..2292460 Pectobacterium wasabiae WPP163 8530502 YP_003259485.1 CDS ruvA NC_013421.1 2292552 2293169 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2292552..2293169 Pectobacterium wasabiae WPP163 8530503 YP_003259486.1 CDS ruvB NC_013421.1 2293177 2294181 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2293177..2294181 Pectobacterium wasabiae WPP163 8530504 YP_003259487.1 CDS Pecwa_2105 NC_013421.1 2294253 2295632 R KEGG: pct:PC1_1821 maltoporin; maltoporin complement(2294253..2295632) Pectobacterium wasabiae WPP163 8530505 YP_003259488.1 CDS Pecwa_2106 NC_013421.1 2295799 2296104 R PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: eca:ECA2489 PTS system, cellobiose-specific IIA component; PTS system lactose/cellobiose-specific transporter subunit IIA complement(2295799..2296104) Pectobacterium wasabiae WPP163 8530506 YP_003259489.1 CDS Pecwa_2107 NC_013421.1 2296270 2297598 R KEGG: pct:PC1_1823 PTS system, lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC complement(2296270..2297598) Pectobacterium wasabiae WPP163 8530507 YP_003259490.1 CDS Pecwa_2108 NC_013421.1 2298053 2299015 D PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: eca:ECA2487 LacI family transcriptional regulator; LacI family transcriptional regulator 2298053..2299015 Pectobacterium wasabiae WPP163 8530508 YP_003259491.1 CDS znuB NC_013421.1 2299102 2299887 R involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane protein complement(2299102..2299887) Pectobacterium wasabiae WPP163 8530509 YP_003259492.1 CDS znuC NC_013421.1 2299884 2300642 R involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter ATPase complement(2299884..2300642) Pectobacterium wasabiae WPP163 8530510 YP_003259493.1 CDS znuA NC_013421.1 2300719 2301738 D involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic protein 2300719..2301738 Pectobacterium wasabiae WPP163 8530511 YP_003259494.1 CDS Pecwa_2112 NC_013421.1 2301751 2303076 D PFAM: peptidase M23; peptidoglycan-binding lysin domain; Opacity-associated protein A; Opacity-associated protein A domain protein; SMART: peptidoglycan-binding LysM; KEGG: pct:PC1_1828 peptidase M23; hypothetical protein 2301751..2303076 Pectobacterium wasabiae WPP163 8530512 YP_003259495.1 CDS Pecwa_2113 NC_013421.1 2303331 2304302 D transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2303331..2304302 Pectobacterium wasabiae WPP163 8530513 YP_003259496.1 CDS Pecwa_2114 NC_013421.1 2304405 2305847 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(2304405..2305847) Pectobacterium wasabiae WPP163 8530514 YP_003259497.1 CDS Pecwa_2115 NC_013421.1 2306104 2307030 R Represses the expression of the zwf, eda, glp and gap; HexR family transcriptional regulator complement(2306104..2307030) Pectobacterium wasabiae WPP163 8530515 YP_003259498.1 CDS Pecwa_2116 NC_013421.1 2307344 2308819 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2307344..2308819 Pectobacterium wasabiae WPP163 8530516 YP_003259499.1 CDS Pecwa_2117 NC_013421.1 2308986 2309627 D catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2308986..2309627 Pectobacterium wasabiae WPP163 8530517 YP_003259500.1 CDS purT NC_013421.1 2309722 2310900 R non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 complement(2309722..2310900) Pectobacterium wasabiae WPP163 8530518 YP_003259501.1 CDS Pecwa_2119 NC_013421.1 2311101 2313152 D PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: eca:ECA2476 protease II; oligopeptidase B 2311101..2313152 Pectobacterium wasabiae WPP163 8530519 YP_003259502.1 CDS Pecwa_2120 NC_013421.1 2313237 2313347 R KEGG: pct:PC1_1836 hypothetical protein; hypothetical protein complement(2313237..2313347) Pectobacterium wasabiae WPP163 8530520 YP_003259503.1 CDS Pecwa_2121 NC_013421.1 2313507 2313737 R PFAM: DNA polymerase II subunit beta; KEGG: eca:ECA2475 DNA polymerase III subunit theta; DNA polymerase III subunit theta complement(2313507..2313737) Pectobacterium wasabiae WPP163 8530521 YP_003259504.1 CDS Pecwa_2122 NC_013421.1 2314109 2314615 D PFAM: ferritin; KEGG: pct:PC1_1838 ferroxidase; ferroxidase 2314109..2314615 Pectobacterium wasabiae WPP163 8530522 YP_003259505.1 CDS Pecwa_2123 NC_013421.1 2314897 2315253 D PFAM: protein of unknown function DUF2511; KEGG: pct:PC1_1839 hypothetical protein; hypothetical protein 2314897..2315253 Pectobacterium wasabiae WPP163 8530523 YP_003259506.1 CDS Pecwa_2125 NC_013421.1 2315952 2316182 D KEGG: ypy:YPK_3096 hypothetical protein; hypothetical protein 2315952..2316182 Pectobacterium wasabiae WPP163 8530525 YP_003259507.1 CDS Pecwa_2126 NC_013421.1 2316212 2316457 D hypothetical protein 2316212..2316457 Pectobacterium wasabiae WPP163 8530526 YP_003259508.1 CDS Pecwa_2127 NC_013421.1 2316866 2317231 D PFAM: ankyrin; SMART: ankyrin; KEGG: ankyrin repeat containing protein; ankyrin 2316866..2317231 Pectobacterium wasabiae WPP163 8530527 YP_003259509.1 CDS Pecwa_2128 NC_013421.1 2317307 2317681 D hypothetical protein 2317307..2317681 Pectobacterium wasabiae WPP163 8530528 YP_003259510.1 CDS Pecwa_2129 NC_013421.1 2318367 2318579 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: eca:ECA2471 cold shock protein; cold-shock protein 2318367..2318579 Pectobacterium wasabiae WPP163 8530529 YP_003259511.1 CDS Pecwa_2130 NC_013421.1 2318771 2319262 R PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE4108 hypothetical protein; N-acetyltransferase GCN5 complement(2318771..2319262) Pectobacterium wasabiae WPP163 8530530 YP_003259512.1 CDS Pecwa_2131 NC_013421.1 2319529 2319756 R PFAM: protein of unknown function DUF1471; KEGG: eca:ECA2468 hypothetical protein; hypothetical protein complement(2319529..2319756) Pectobacterium wasabiae WPP163 8530531 YP_003259513.1 CDS Pecwa_2132 NC_013421.1 2319960 2321027 D PFAM: malate/L-lactate dehydrogenase; KEGG: pct:PC1_1845 malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase 2319960..2321027 Pectobacterium wasabiae WPP163 8530532 YP_003259514.1 CDS Pecwa_2133 NC_013421.1 2321067 2321762 D PFAM: Extensin family protein; KEGG: eca:ECA2466 hypothetical protein; extensin family protein 2321067..2321762 Pectobacterium wasabiae WPP163 8530533 YP_003259515.1 CDS Pecwa_2134 NC_013421.1 2321999 2322106 D hypothetical protein 2321999..2322106 Pectobacterium wasabiae WPP163 8530534 YP_003259516.1 CDS Pecwa_2135 NC_013421.1 2322292 2322483 R PFAM: protein of unknown function DUF1482; KEGG: pct:PC1_1847 hypothetical protein; hypothetical protein complement(2322292..2322483) Pectobacterium wasabiae WPP163 8530535 YP_003259517.1 CDS yebU NC_013421.1 2322608 2324062 R in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF complement(2322608..2324062) Pectobacterium wasabiae WPP163 8530536 YP_003259518.1 CDS Pecwa_2137 NC_013421.1 2324188 2326830 R PFAM: hypothetical protein; KEGG: pct:PC1_1849 mammalian cell entry related domain protein; hypothetical protein complement(2324188..2326830) Pectobacterium wasabiae WPP163 8530537 YP_003259519.1 CDS Pecwa_2138 NC_013421.1 2326833 2328122 R TIGRFAM: integral membrane protein, PqiA family; PFAM: paraquat-inducible protein A; KEGG: pct:PC1_1850 integral membrane protein, PqiA family; PqiA family integral membrane protein complement(2326833..2328122) Pectobacterium wasabiae WPP163 8530538 YP_003259520.1 CDS Pecwa_2139 NC_013421.1 2328416 2328922 D PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: pct:PC1_1851 GAF sensor protein; GAF sensor protein 2328416..2328922 Pectobacterium wasabiae WPP163 8530539 YP_003259521.1 CDS Pecwa_2140 NC_013421.1 2329007 2329765 D affects solute and DNA transport through an unknown mechanism; solute/DNA competence effector 2329007..2329765 Pectobacterium wasabiae WPP163 8530540 YP_003259522.1 CDS Pecwa_2141 NC_013421.1 2329785 2331800 D Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2329785..2331800 Pectobacterium wasabiae WPP163 8530541 YP_003259523.1 CDS Pecwa_2142 NC_013421.1 2331919 2332785 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA2458 AraC family transcriptional regulator; AraC family transcriptional regulator complement(2331919..2332785) Pectobacterium wasabiae WPP163 8530542 YP_003259524.1 CDS Pecwa_2143 NC_013421.1 2332830 2333462 R PFAM: PEBP family protein; KEGG: eca:ECA2457 hypothetical protein; PEBP family protein complement(2332830..2333462) Pectobacterium wasabiae WPP163 8530543 YP_003259525.1 CDS potD NC_013421.1 2333674 2334717 R can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotD is a periplasmic component that binds the substrate; spermidine/putrescine ABC transporter substrate-binding protein complement(2333674..2334717) Pectobacterium wasabiae WPP163 8530544 YP_003259526.1 CDS potC NC_013421.1 2334797 2335573 R can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; spermidine/putrescine ABC transporter membrane protein complement(2334797..2335573) Pectobacterium wasabiae WPP163 8530545 YP_003259527.1 CDS potB NC_013421.1 2335570 2336430 R can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; spermidine/putrescine ABC transporter membrane protein complement(2335570..2336430) Pectobacterium wasabiae WPP163 8530546 YP_003259528.1 CDS potA NC_013421.1 2336414 2337529 R functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; putrescine/spermidine ABC transporter ATPase complement(2336414..2337529) Pectobacterium wasabiae WPP163 8530547 YP_003259529.1 CDS Pecwa_2148 NC_013421.1 2337900 2339132 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2337900..2339132 Pectobacterium wasabiae WPP163 8530548 YP_003259530.1 CDS Pecwa_2149 NC_013421.1 2339211 2340332 R PFAM: cupin; SMART: transcription factor jumonji jmjC domain protein; KEGG: pct:PC1_1864 cupin 4 family protein; cupin complement(2339211..2340332) Pectobacterium wasabiae WPP163 8530549 YP_003259531.1 CDS Pecwa_2150 NC_013421.1 2340567 2342027 R PFAM: PhoQ Sensor domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pct:PC1_1865 histidine kinase; sensor protein PhoQ complement(2340567..2342027) Pectobacterium wasabiae WPP163 8530550 YP_003259532.1 CDS Pecwa_2151 NC_013421.1 2342024 2342713 R response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; PhoP family transcriptional regulator complement(2342024..2342713) Pectobacterium wasabiae WPP163 8530551 YP_003259533.1 CDS Pecwa_2152 NC_013421.1 2342947 2344317 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2342947..2344317) Pectobacterium wasabiae WPP163 8530552 YP_003259534.1 CDS Pecwa_2153 NC_013421.1 2344450 2345088 R HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein complement(2344450..2345088) Pectobacterium wasabiae WPP163 8530553 YP_003259535.1 CDS mnmA NC_013421.1 2345091 2346197 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(2345091..2346197) Pectobacterium wasabiae WPP163 8530554 YP_003259536.1 CDS Pecwa_2155 NC_013421.1 2346339 2346785 R PFAM: NUDIX hydrolase; KEGG: pct:PC1_1870 NUDIX hydrolase; NUDIX hydrolase complement(2346339..2346785) Pectobacterium wasabiae WPP163 8530555 YP_003259537.1 CDS Pecwa_2156 NC_013421.1 2346778 2347407 R PFAM: pseudouridine synthase; KEGG: pct:PC1_1871 pseudouridine synthase; pseudouridine synthase complement(2346778..2347407) Pectobacterium wasabiae WPP163 8530556 YP_003259538.1 CDS Pecwa_2157 NC_013421.1 2347536 2348789 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2347536..2348789 Pectobacterium wasabiae WPP163 8530557 YP_003259539.1 CDS Pecwa_2159 NC_013421.1 2349154 2349333 D hypothetical protein 2349154..2349333 Pectobacterium wasabiae WPP163 8530559 YP_003259540.1 CDS Pecwa_2162 NC_013421.1 2351368 2351658 D PFAM: transposase IS3/IS911 family protein; KEGG: mlo:msr5972 transposase; transposase IS3/IS911 family protein 2351368..2351658 Pectobacterium wasabiae WPP163 8530562 YP_003259541.1 CDS Pecwa_2164 NC_013421.1 2352342 2352611 D PFAM: transposase IS200-family protein; KEGG: ypg:YpAngola_A3481 IS1541, transposase; transposase IS200-family protein 2352342..2352611 Pectobacterium wasabiae WPP163 8530564 YP_003259542.1 CDS Pecwa_2165 NC_013421.1 2352789 2353895 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA2438 electron transporter; 4Fe-4S ferredoxin complement(2352789..2353895) Pectobacterium wasabiae WPP163 8530565 YP_003259543.1 CDS Pecwa_2166 NC_013421.1 2354366 2354716 R PFAM: Mor transcription activator domain protein; KEGG: eca:ECA2437 regulator of pectin lyase production; Mor transcription activator domain-containing protein complement(2354366..2354716) Pectobacterium wasabiae WPP163 8530566 YP_003259544.1 CDS Pecwa_2167 NC_013421.1 2355208 2355942 R PFAM: hypothetical protein; peptidase S24/S26A/S26B, conserved region; SMART: hypothetical protein; KEGG: eca:ECA2435 regulator of pectin lyase production; phage repressor complement(2355208..2355942) Pectobacterium wasabiae WPP163 8530567 YP_003259545.1 CDS Pecwa_2168 NC_013421.1 2356338 2356595 D KEGG: eca:ECA2434 hypothetical protein; hypothetical protein 2356338..2356595 Pectobacterium wasabiae WPP163 8530568 YP_003259546.1 CDS Pecwa_2169 NC_013421.1 2356979 2359147 D KEGG: eca:ECA2433 signaling protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; hypothetical protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2356979..2359147 Pectobacterium wasabiae WPP163 8530569 YP_003259547.1 CDS Pecwa_2170 NC_013421.1 2359297 2361042 D KEGG: eca:ECA2432 two-component sensor kinase; PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase LytS 2359297..2361042 Pectobacterium wasabiae WPP163 8530570 YP_003259548.1 CDS Pecwa_2171 NC_013421.1 2361039 2361788 D PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: eca:ECA2431 two-component response regulator; LytTR family two component transcriptional regulator 2361039..2361788 Pectobacterium wasabiae WPP163 8530571 YP_003259549.1 CDS Pecwa_2172 NC_013421.1 2361973 2363196 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2430 hypothetical protein; major facilitator superfamily protein 2361973..2363196 Pectobacterium wasabiae WPP163 8530572 YP_003259550.1 CDS Pecwa_2173 NC_013421.1 2363492 2364829 D PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2429 glycerol-3-phosphate-binding periplasmic protein precursor; extracellular solute-binding protein 2363492..2364829 Pectobacterium wasabiae WPP163 8530573 YP_003259551.1 CDS Pecwa_2174 NC_013421.1 2364860 2365708 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: eca:ECA2428 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 2364860..2365708 Pectobacterium wasabiae WPP163 8530574 YP_003259552.1 CDS Pecwa_2175 NC_013421.1 2365872 2366753 D metalloprotease; heat shock protein HtpX 2365872..2366753 Pectobacterium wasabiae WPP163 8530575 YP_003259553.1 CDS Pecwa_2176 NC_013421.1 2367095 2368261 D KEGG: eca:ECA2426 oligogalacturonate lyase; oligogalacturonide lyase 2367095..2368261 Pectobacterium wasabiae WPP163 8530576 YP_003259554.1 CDS Pecwa_2177 NC_013421.1 2368477 2369268 D PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: pct:PC1_1885 transcriptional regulator, IclR family; transcriptional regulator, IclR family 2368477..2369268 Pectobacterium wasabiae WPP163 8530577 YP_003259555.1 CDS Pecwa_2178 NC_013421.1 2369518 2369781 D KEGG: eca:ECA2424 hypothetical protein; hypothetical protein 2369518..2369781 Pectobacterium wasabiae WPP163 8530578 YP_003259556.1 CDS Pecwa_2179 NC_013421.1 2369904 2371295 D PFAM: amino acid permease-associated region; KEGG: pct:PC1_1887 amino acid permease-associated region; amino acid permease 2369904..2371295 Pectobacterium wasabiae WPP163 8530579 YP_003259557.1 CDS Pecwa_2180 NC_013421.1 2371560 2373488 D catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2371560..2373488 Pectobacterium wasabiae WPP163 8530580 YP_003259558.1 CDS infC NC_013421.1 2373491 2374033 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2373491..2374033 Pectobacterium wasabiae WPP163 8530581 YP_003259559.1 CDS rpmI NC_013421.1 2374147 2374344 D TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: eca:ECA2420 50S ribosomal protein L35; 50S ribosomal protein L35 2374147..2374344 Pectobacterium wasabiae WPP163 8530582 YP_003259560.1 CDS rplT NC_013421.1 2374388 2374744 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2374388..2374744 Pectobacterium wasabiae WPP163 8530583 YP_003259561.1 CDS pheS NC_013421.1 2375073 2376056 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2375073..2376056 Pectobacterium wasabiae WPP163 8530584 YP_003259562.1 CDS pheT NC_013421.1 2376071 2378458 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2376071..2378458 Pectobacterium wasabiae WPP163 8530585 YP_003259563.1 CDS ihfA NC_013421.1 2378463 2378759 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2378463..2378759 Pectobacterium wasabiae WPP163 8530586 YP_003259564.1 CDS Pecwa_2187 NC_013421.1 2378827 2379288 R PFAM: GCN5-related N-acetyltransferase; KEGG: dde:Dde_3024 acetyltransferase; N-acetyltransferase GCN5 complement(2378827..2379288) Pectobacterium wasabiae WPP163 8530587 YP_003259565.1 CDS Pecwa_2188 NC_013421.1 2379321 2379698 R KEGG: pct:PC1_1895 hypothetical protein; hypothetical protein complement(2379321..2379698) Pectobacterium wasabiae WPP163 8530588 YP_003259566.1 CDS Pecwa_2189 NC_013421.1 2379835 2381553 R PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: eca:ECA2414 ABC transporter ATP-binding protein; ABC transporter complement(2379835..2381553) Pectobacterium wasabiae WPP163 8530589 YP_003259567.1 CDS Pecwa_2190 NC_013421.1 2381589 2382485 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA2413 hypothetical protein; hypothetical protein complement(2381589..2382485) Pectobacterium wasabiae WPP163 8530590 YP_003259568.1 CDS nadE NC_013421.1 2382703 2383527 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(2382703..2383527) Pectobacterium wasabiae WPP163 8530591 YP_003259569.1 CDS Pecwa_2192 NC_013421.1 2383753 2384085 D osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE 2383753..2384085 Pectobacterium wasabiae WPP163 8530592 YP_003259570.1 CDS Pecwa_2193 NC_013421.1 2384276 2385670 R PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA2410 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(2384276..2385670) Pectobacterium wasabiae WPP163 8530593 YP_003259571.1 CDS Pecwa_2194 NC_013421.1 2385848 2386423 R PFAM: membrane-bound metal-dependent hydrolase; KEGG: pct:PC1_1901 membrane-bound metal-dependent hydrolase; hypothetical protein complement(2385848..2386423) Pectobacterium wasabiae WPP163 8530594 YP_003259572.1 CDS Pecwa_2195 NC_013421.1 2386523 2387479 R KEGG: pct:PC1_1902 pectin acetylesterase; pectin acetylesterase complement(2386523..2387479) Pectobacterium wasabiae WPP163 8530595 YP_003259573.1 CDS Pecwa_2196 NC_013421.1 2387812 2388534 R PFAM: oligogalacturonate-specific porin; KEGG: eca:ECA2407 oligogalacturonate-specific porin; oligogalacturonate-specific porin complement(2387812..2388534) Pectobacterium wasabiae WPP163 8530596 YP_003259574.1 CDS Pecwa_2197 NC_013421.1 2388783 2390072 R PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein; extracellular solute-binding protein complement(2388783..2390072) Pectobacterium wasabiae WPP163 8530597 YP_003259575.1 CDS Pecwa_2198 NC_013421.1 2390088 2391215 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: eca:ECA2405 ABC transporter ATP-binding protein; ABC transporter complement(2390088..2391215) Pectobacterium wasabiae WPP163 8530598 YP_003259576.1 CDS Pecwa_2199 NC_013421.1 2391229 2392134 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1906 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(2391229..2392134) Pectobacterium wasabiae WPP163 8530599 YP_003259577.1 CDS Pecwa_2200 NC_013421.1 2392127 2393017 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1907 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(2392127..2393017) Pectobacterium wasabiae WPP163 8530600 YP_003259578.1 CDS Pecwa_2201 NC_013421.1 2393063 2394694 R PFAM: periplasmic pectate lyase; KEGG: eca:ECA2402 pectate disaccharide-lyase; pectate disaccharide-lyase complement(2393063..2394694) Pectobacterium wasabiae WPP163 8530601 YP_003259579.1 CDS Pecwa_2202 NC_013421.1 2394967 2395728 R catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase complement(2394967..2395728) Pectobacterium wasabiae WPP163 8530602 YP_003259580.1 CDS Pecwa_2203 NC_013421.1 2395810 2396646 R 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase complement(2395810..2396646) Pectobacterium wasabiae WPP163 8530603 YP_003259581.1 CDS Pecwa_2204 NC_013421.1 2397013 2397345 D PFAM: cupin; KEGG: pct:PC1_1911 cupin 2 conserved barrel domain protein; cupin 2397013..2397345 Pectobacterium wasabiae WPP163 8530604 YP_003259582.1 CDS Pecwa_2205 NC_013421.1 2397432 2398097 R YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase complement(2397432..2398097) Pectobacterium wasabiae WPP163 8530605 YP_003259583.1 CDS Pecwa_2206 NC_013421.1 2398384 2398932 D KEGG: pct:PC1_1914 hypothetical protein; hypothetical protein 2398384..2398932 Pectobacterium wasabiae WPP163 8530606 YP_003259584.1 CDS Pecwa_2207 NC_013421.1 2399003 2399863 R PFAM: fructosamine/ketosamine-3-kinase; aminoglycoside phosphotransferase; KEGG: pct:PC1_1915 fructosamine kinase; fructosamine/ketosamine-3-kinase complement(2399003..2399863) Pectobacterium wasabiae WPP163 8530607 YP_003259585.1 CDS Pecwa_2208 NC_013421.1 2400105 2400962 R PFAM: ABC transporter; transporter permease protein; KEGG: eca:ECA2395 chelated iron transporter membrane protein; ABC transporter complement(2400105..2400962) Pectobacterium wasabiae WPP163 8530608 YP_003259586.1 CDS Pecwa_2209 NC_013421.1 2400959 2401822 R PFAM: ABC transporter; transporter permease protein; KEGG: eca:ECA2394 chelated iron transporter membrane protein; ABC transporter complement(2400959..2401822) Pectobacterium wasabiae WPP163 8530609 YP_003259587.1 CDS Pecwa_2210 NC_013421.1 2401822 2402712 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2393 chelated iron transporter membrane protein; ABC transporter complement(2401822..2402712) Pectobacterium wasabiae WPP163 8530610 YP_003259588.1 CDS Pecwa_2211 NC_013421.1 2402709 2403623 R PFAM: periplasmic solute binding protein; KEGG: eca:ECA2392 periplasmic chelated iron-binding protein; periplasmic solute binding protein complement(2402709..2403623) Pectobacterium wasabiae WPP163 8530611 YP_003259589.1 CDS Pecwa_2212 NC_013421.1 2404570 2404686 D KEGG: yen:YE1764 hypothetical protein; hypothetical protein 2404570..2404686 Pectobacterium wasabiae WPP163 8530612 YP_003259590.1 CDS Pecwa_2213 NC_013421.1 2404728 2404937 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sgl:SG1320 cold shock-like protein CspC; cold shock-like protein CspC 2404728..2404937 Pectobacterium wasabiae WPP163 8530613 YP_003259591.1 CDS rrmA NC_013421.1 2405045 2405875 D methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase A 2405045..2405875 Pectobacterium wasabiae WPP163 8530614 YP_003259592.1 CDS Pecwa_2215 NC_013421.1 2405936 2406508 R PFAM: protein of unknown function DUF204; KEGG: pct:PC1_1922 hypothetical protein; hypothetical protein complement(2405936..2406508) Pectobacterium wasabiae WPP163 8530615 YP_003259593.1 CDS Pecwa_2216 NC_013421.1 2406923 2407381 R PFAM: protein of unknown function DUF986; KEGG: eca:ECA2388 hypothetical protein; hypothetical protein complement(2406923..2407381) Pectobacterium wasabiae WPP163 8530616 YP_003259594.1 CDS Pecwa_2217 NC_013421.1 2407455 2408297 R hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID complement(2407455..2408297) Pectobacterium wasabiae WPP163 8530617 YP_003259595.1 CDS Pecwa_2218 NC_013421.1 2408312 2409109 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: eca:ECA2386 PTS system, mannose-specific IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC complement(2408312..2409109) Pectobacterium wasabiae WPP163 8530618 YP_003259596.1 CDS Pecwa_2219 NC_013421.1 2409286 2410254 R KEGG: pct:PC1_1926 PTS system, mannose/fructose/sorbose family, IIsubunit beta; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PTS system, mannose/fructose/sorbose family, IIsubunit alpha; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component; PTS system mannose/fructose/sorbose family transporter subunit IIB complement(2409286..2410254) Pectobacterium wasabiae WPP163 8530619 YP_003259597.1 CDS Pecwa_2220 NC_013421.1 2410947 2412503 D PFAM: integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: eca:ECA2384 hypothetical protein; integral membrane protein TerC 2410947..2412503 Pectobacterium wasabiae WPP163 8530620 YP_003259598.1 CDS Pecwa_2221 NC_013421.1 2412530 2412748 D KEGG: eum:ECUMN_4194 hypothetical protein; hypothetical protein 2412530..2412748 Pectobacterium wasabiae WPP163 8530621 YP_003259599.1 CDS Pecwa_2222 NC_013421.1 2412705 2413163 D PFAM: transposase IS200-family protein; KEGG: ypi:YpsIP31758_3905 IS1541, transposase; transposase IS200-family protein 2412705..2413163 Pectobacterium wasabiae WPP163 8530622 YP_003259600.1 CDS Pecwa_2223 NC_013421.1 2413326 2414690 R KEGG: pct:PC1_1928 L-serine dehydratase; TIGRFAM: L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase complement(2413326..2414690) Pectobacterium wasabiae WPP163 8530623 YP_003259601.1 CDS Pecwa_2224 NC_013421.1 2415032 2415625 R PFAM: NUDIX hydrolase; KEGG: pct:PC1_1929 NUDIX hydrolase; hypothetical protein complement(2415032..2415625) Pectobacterium wasabiae WPP163 8530624 YP_003259602.1 CDS Pecwa_2225 NC_013421.1 2415622 2417052 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: chorismate binding-like; anthranilate synthase component I domain protein; KEGG: eca:ECA2378 para-aminobenzoate synthase component I; para-aminobenzoate synthase subunit I complement(2415622..2417052) Pectobacterium wasabiae WPP163 8530625 YP_003259603.1 CDS Pecwa_2226 NC_013421.1 2417183 2417425 D PFAM: protein of unknown function UPF0181; KEGG: eca:ECA2377 hypothetical protein; hypothetical protein 2417183..2417425 Pectobacterium wasabiae WPP163 8530626 YP_003259604.1 CDS Pecwa_2227 NC_013421.1 2417455 2417799 R PFAM: endoribonuclease L-PSP; KEGG: pct:PC1_1932 endoribonuclease L-PSP; endoribonuclease L-PSP complement(2417455..2417799) Pectobacterium wasabiae WPP163 8530627 YP_003259605.1 CDS Pecwa_2228 NC_013421.1 2417984 2419903 D SMART: helicase c2; DEAD/DEAH box helicase; KEGG: eca:ECA2375 ATP-dependent helicase; helicase c2 2417984..2419903 Pectobacterium wasabiae WPP163 8530628 YP_003259606.1 CDS Pecwa_2229 NC_013421.1 2420018 2420719 D PFAM: peptidase M22 glycoprotease; KEGG: eca:ECA2374 hypothetical protein; peptidase M22 glycoprotease 2420018..2420719 Pectobacterium wasabiae WPP163 8530629 YP_003259607.1 CDS Pecwa_2230 NC_013421.1 2420817 2421440 D TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; KEGG: pct:PC1_1935 outer membrane lipoprotein, Slp family; outer membrane lipoprotein, Slp family 2420817..2421440 Pectobacterium wasabiae WPP163 8530630 YP_003259608.1 CDS Pecwa_2231 NC_013421.1 2421654 2423372 D Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2421654..2423372 Pectobacterium wasabiae WPP163 8530631 YP_003259609.1 CDS Pecwa_2232 NC_013421.1 2423583 2424707 D KEGG: eca:ECA2371 ribonuclease D; TIGRFAM: ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; HRDC domain protein; ribonuclease D 2423583..2424707 Pectobacterium wasabiae WPP163 8530632 YP_003259610.1 CDS Pecwa_2233 NC_013421.1 2424876 2425106 R hypothetical protein complement(2424876..2425106) Pectobacterium wasabiae WPP163 8530633 YP_003259611.1 CDS minE NC_013421.1 2425321 2425590 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(2425321..2425590) Pectobacterium wasabiae WPP163 8530634 YP_003259612.1 CDS Pecwa_2235 NC_013421.1 2425594 2426406 R ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD complement(2425594..2426406) Pectobacterium wasabiae WPP163 8530635 YP_003259613.1 CDS minC NC_013421.1 2426427 2427113 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(2426427..2427113) Pectobacterium wasabiae WPP163 8530636 YP_003259614.1 CDS Pecwa_2237 NC_013421.1 2427250 2427507 D PFAM: protein of unknown function DUF709; KEGG: eca:ECA2367 hypothetical protein; hypothetical protein 2427250..2427507 Pectobacterium wasabiae WPP163 8530637 YP_003259615.1 CDS Pecwa_2238 NC_013421.1 2427851 2428507 D PFAM: fumarylacetoacetate hydrolase; KEGG: pct:PC1_1942 fumarylacetoacetate hydrolase; hypothetical protein 2427851..2428507 Pectobacterium wasabiae WPP163 8530638 YP_003259616.1 CDS Pecwa_2239 NC_013421.1 2428615 2429061 D PFAM: protein of unknown function UPF0153; KEGG: pct:PC1_1943 hypothetical protein; hypothetical protein 2428615..2429061 Pectobacterium wasabiae WPP163 8530639 YP_003259617.1 CDS Pecwa_2240 NC_013421.1 2429181 2429276 R KEGG: pct:PC1_1944 hypothetical protein; hypothetical protein complement(2429181..2429276) Pectobacterium wasabiae WPP163 8530640 YP_003259618.1 CDS Pecwa_2241 NC_013421.1 2429592 2429789 D KEGG: pct:PC1_1945 DNA polymerase III subunit theta; DNA polymerase III subunit theta 2429592..2429789 Pectobacterium wasabiae WPP163 8530641 YP_003259619.1 CDS Pecwa_2242 NC_013421.1 2430012 2430542 R disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B complement(2430012..2430542) Pectobacterium wasabiae WPP163 8530642 YP_003259620.1 CDS nhaB NC_013421.1 2430738 2432318 R involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter complement(2430738..2432318) Pectobacterium wasabiae WPP163 8530643 YP_003259621.1 CDS Pecwa_2244 NC_013421.1 2432549 2433268 D Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 2432549..2433268 Pectobacterium wasabiae WPP163 8530644 YP_003259622.1 CDS Pecwa_2245 NC_013421.1 2433369 2434928 R PFAM: SpoVR family protein; KEGG: pct:PC1_1949 SpoVR family protein; SpoVR family protein complement(2433369..2434928) Pectobacterium wasabiae WPP163 8530645 YP_003259623.1 CDS Pecwa_2246 NC_013421.1 2435151 2436050 R PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: eca:ECA2358 aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase complement(2435151..2436050) Pectobacterium wasabiae WPP163 8530646 YP_003259624.1 CDS Pecwa_2247 NC_013421.1 2436088 2436621 R KEGG: eca:ECA2357 kinase; kinase complement(2436088..2436621) Pectobacterium wasabiae WPP163 8530647 YP_003259625.1 CDS Pecwa_2248 NC_013421.1 2436618 2437055 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: eca:ECA2356 sugar phosphotransferase enzyme IIA component; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(2436618..2437055) Pectobacterium wasabiae WPP163 8530648 YP_003259626.1 CDS Pecwa_2249 NC_013421.1 2437062 2437340 R KEGG: eca:ECA2355 hypothetical protein; hypothetical protein complement(2437062..2437340) Pectobacterium wasabiae WPP163 8530649 YP_003259627.1 CDS Pecwa_2250 NC_013421.1 2437406 2438743 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(2437406..2438743) Pectobacterium wasabiae WPP163 8530650 YP_003259628.1 CDS Pecwa_2251 NC_013421.1 2438757 2439050 R PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: eca:ECA2353 hypothetical protein; PTS system lactose/cellobiose-specific transporter subunit IIB complement(2438757..2439050) Pectobacterium wasabiae WPP163 8530651 YP_003259629.1 CDS Pecwa_2252 NC_013421.1 2439061 2440041 R PFAM: phosphofructokinase; KEGG: eca:ECA2352 6-phosphofructokinase isozyme II; phosphofructokinase complement(2439061..2440041) Pectobacterium wasabiae WPP163 8530652 YP_003259630.1 CDS Pecwa_2253 NC_013421.1 2440526 2441779 D catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2440526..2441779 Pectobacterium wasabiae WPP163 8530653 YP_003259631.1 CDS Pecwa_2254 NC_013421.1 2441804 2443003 R TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA2350 transporter; Bcr/CflA subfamily drug resistance transporter complement(2441804..2443003) Pectobacterium wasabiae WPP163 8530654 YP_003259632.1 CDS Pecwa_2255 NC_013421.1 2443202 2443612 R PFAM: hemerythrin HHE cation binding domain protein; KEGG: pct:PC1_1959 hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain protein complement(2443202..2443612) Pectobacterium wasabiae WPP163 8530655 YP_003259633.1 CDS Pecwa_2256 NC_013421.1 2443744 2445018 R PFAM: protein of unknown function DUF444; KEGG: pct:PC1_1960 hypothetical protein; hypothetical protein complement(2443744..2445018) Pectobacterium wasabiae WPP163 8530656 YP_003259634.1 CDS Pecwa_2257 NC_013421.1 2445055 2446989 R PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: eca:ECA2348 hypothetical protein; serine protein kinase PrkA complement(2445055..2446989) Pectobacterium wasabiae WPP163 8530657 YP_003259635.1 CDS Pecwa_2258 NC_013421.1 2447445 2448194 D PFAM: MltA-interacting MipA family protein; KEGG: eca:ECA2347 MltA-interacting protein; MltA-interacting MipA family protein 2447445..2448194 Pectobacterium wasabiae WPP163 8530658 YP_003259636.1 CDS Pecwa_2259 NC_013421.1 2448311 2449162 D PFAM: aldo/keto reductase; KEGG: pct:PC1_1963 aldo/keto reductase; aldo/keto reductase 2448311..2449162 Pectobacterium wasabiae WPP163 8530659 YP_003259637.1 CDS Pecwa_2260 NC_013421.1 2449223 2450092 R PFAM: aldose 1-epimerase; KEGG: pct:PC1_1964 aldose 1-epimerase; aldose 1-epimerase complement(2449223..2450092) Pectobacterium wasabiae WPP163 8530660 YP_003259638.1 CDS Pecwa_2261 NC_013421.1 2450199 2451194 R KEGG: eca:ECA2344 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(2450199..2451194) Pectobacterium wasabiae WPP163 8530661 YP_003259639.1 CDS Pecwa_2262 NC_013421.1 2451537 2451956 D this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 2451537..2451956 Pectobacterium wasabiae WPP163 8530662 YP_003259640.1 CDS Pecwa_2263 NC_013421.1 2452089 2452367 D PFAM: protein of unknown function DUF1315; KEGG: pct:PC1_1967 hypothetical protein; hypothetical protein 2452089..2452367 Pectobacterium wasabiae WPP163 8530663 YP_003259641.1 CDS Pecwa_2264 NC_013421.1 2452412 2453059 R catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase complement(2452412..2453059) Pectobacterium wasabiae WPP163 8530664 YP_003259642.1 CDS ansA NC_013421.1 2453078 2454160 R converts asparagine to aspartate and ammonia; asparaginase complement(2453078..2454160) Pectobacterium wasabiae WPP163 8530665 YP_003259643.1 CDS Pecwa_2266 NC_013421.1 2454197 2456047 R SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; protease 4 complement(2454197..2456047) Pectobacterium wasabiae WPP163 8530666 YP_003259644.1 CDS Pecwa_2267 NC_013421.1 2456315 2456866 D PFAM: nitroreductase; KEGG: pct:PC1_1971 nitroreductase; hypothetical protein 2456315..2456866 Pectobacterium wasabiae WPP163 8530667 YP_003259645.1 CDS Pecwa_2268 NC_013421.1 2456963 2458888 D decatenates replicating daughter chromosomes; DNA topoisomerase III 2456963..2458888 Pectobacterium wasabiae WPP163 8530668 YP_003259646.1 CDS Pecwa_2269 NC_013421.1 2458885 2459178 D PFAM: protein of unknown function DUF1496; KEGG: eca:ECA2336 hypothetical protein; hypothetical protein 2458885..2459178 Pectobacterium wasabiae WPP163 8530669 YP_003259647.1 CDS Pecwa_2270 NC_013421.1 2459285 2460103 R removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III complement(2459285..2460103) Pectobacterium wasabiae WPP163 8530670 YP_003259648.1 CDS Pecwa_2271 NC_013421.1 2460523 2461149 D PFAM: protein of unknown function UPF0126; KEGG: eca:ECA2334 hypothetical protein; hypothetical protein 2460523..2461149 Pectobacterium wasabiae WPP163 8530671 YP_003259649.1 CDS Pecwa_2272 NC_013421.1 2461310 2461789 D TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: dze:Dd1591_4093 type VI secretion system effector, Hcp1 family; type VI secretion system effector 2461310..2461789 Pectobacterium wasabiae WPP163 8530672 YP_003259650.1 CDS Pecwa_2273 NC_013421.1 2462349 2462486 D hypothetical protein 2462349..2462486 Pectobacterium wasabiae WPP163 8530673 YP_003259651.1 CDS Pecwa_2274 NC_013421.1 2462547 2462819 R KEGG: ype:YPO0523 hypothetical protein; hypothetical protein complement(2462547..2462819) Pectobacterium wasabiae WPP163 8530674 YP_003259652.1 CDS Pecwa_2275 NC_013421.1 2462940 2463212 R KEGG: ypy:YPK_3541 hypothetical protein; hypothetical protein complement(2462940..2463212) Pectobacterium wasabiae WPP163 8530675 YP_003259653.1 CDS Pecwa_2276 NC_013421.1 2463540 2464385 R KEGG: ypi:YpsIP31758_1345 hypothetical protein; hypothetical protein complement(2463540..2464385) Pectobacterium wasabiae WPP163 8530676 YP_003259654.1 CDS purU NC_013421.1 2465246 2466094 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(2465246..2466094) Pectobacterium wasabiae WPP163 8530678 YP_003259655.1 CDS Pecwa_2278 NC_013421.1 2466177 2466644 R PFAM: SEC-C motif domain protein; KEGG: pct:PC1_1977 sec-C motif domain protein; hypothetical protein complement(2466177..2466644) Pectobacterium wasabiae WPP163 8530679 YP_003259656.1 CDS Pecwa_2279 NC_013421.1 2466776 2467687 D PFAM: patatin; KEGG: eca:ECA2331 hypothetical protein; hypothetical protein 2466776..2467687 Pectobacterium wasabiae WPP163 8530680 YP_003259657.1 CDS Pecwa_2280 NC_013421.1 2467804 2468820 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eca:ECA2330 response regulator of RpoS; response regulator of RpoS 2467804..2468820 Pectobacterium wasabiae WPP163 8530681 YP_003259658.1 CDS Pecwa_2281 NC_013421.1 2469027 2469938 D together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 2469027..2469938 Pectobacterium wasabiae WPP163 8530682 YP_003259659.1 CDS Pecwa_2282 NC_013421.1 2470084 2470491 R PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: pct:PC1_1981 histone family protein nucleoid-structuring protein H-NS; global DNA-binding transcriptional dual regulator H-NS complement(2470084..2470491) Pectobacterium wasabiae WPP163 8530683 YP_003259660.1 CDS Pecwa_2283 NC_013421.1 2470885 2471490 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2470885..2471490 Pectobacterium wasabiae WPP163 8530684 YP_003259661.1 CDS Pecwa_2284 NC_013421.1 2471615 2474293 R PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: eca:ECA2326 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase complement(2471615..2474293) Pectobacterium wasabiae WPP163 8530685 YP_003259662.1 CDS Pecwa_2285 NC_013421.1 2475256 2476926 D PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_1984 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 2475256..2476926 Pectobacterium wasabiae WPP163 8530686 YP_003259663.1 CDS Pecwa_2286 NC_013421.1 2477118 2478755 D PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_1985 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 2477118..2478755 Pectobacterium wasabiae WPP163 8530687 YP_003259664.1 CDS oppB NC_013421.1 2478810 2479730 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1986 binding-protein-dependent transport systems inner membrane component; oligopeptide transporter permease 2478810..2479730 Pectobacterium wasabiae WPP163 8530688 YP_003259665.1 CDS Pecwa_2288 NC_013421.1 2479742 2480650 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1987 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 2479742..2480650 Pectobacterium wasabiae WPP163 8530689 YP_003259666.1 CDS oppD NC_013421.1 2480662 2481657 D KEGG: pct:PC1_1988 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; oligopeptide transporter ATP-binding protein 2480662..2481657 Pectobacterium wasabiae WPP163 8530690 YP_003259667.1 CDS Pecwa_2290 NC_013421.1 2481654 2482682 D KEGG: pct:PC1_1989 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; oligopeptide/dipeptide ABC transporter ATPase 2481654..2482682 Pectobacterium wasabiae WPP163 8530691 YP_003259668.1 CDS Pecwa_2291 NC_013421.1 2482754 2483077 R highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein complement(2482754..2483077) Pectobacterium wasabiae WPP163 8530692 YP_003259669.1 CDS cls NC_013421.1 2483133 2484593 R catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase complement(2483133..2484593) Pectobacterium wasabiae WPP163 8530693 YP_003259670.1 CDS Pecwa_2293 NC_013421.1 2485040 2486713 R PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; KEGG: eca:ECA2317 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(2485040..2486713) Pectobacterium wasabiae WPP163 8530694 YP_003259671.1 CDS Pecwa_2294 NC_013421.1 2486844 2487140 R PFAM: YCII-related; KEGG: eca:ECA2316 hypothetical protein; hypothetical protein complement(2486844..2487140) Pectobacterium wasabiae WPP163 8530695 YP_003259672.1 CDS Pecwa_2295 NC_013421.1 2487391 2488146 D membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; transporter TonB 2487391..2488146 Pectobacterium wasabiae WPP163 8530696 YP_003259673.1 CDS Pecwa_2296 NC_013421.1 2488279 2488701 R YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase complement(2488279..2488701) Pectobacterium wasabiae WPP163 8530697 YP_003259674.1 CDS Pecwa_2297 NC_013421.1 2488724 2489290 R Involved in cell division; probably involved in intracellular septation; intracellular septation protein A complement(2488724..2489290) Pectobacterium wasabiae WPP163 8530698 YP_003259675.1 CDS Pecwa_2298 NC_013421.1 2489482 2490237 R PFAM: protein of unknown function UPF0259; KEGG: pct:PC1_1998 hypothetical protein; hypothetical protein complement(2489482..2490237) Pectobacterium wasabiae WPP163 8530699 YP_003259676.1 CDS Pecwa_2299 NC_013421.1 2490586 2491218 D receptor for colicin S4; outer membrane protein W 2490586..2491218 Pectobacterium wasabiae WPP163 8530700 YP_003259677.1 CDS Pecwa_2300 NC_013421.1 2491355 2492074 R PFAM: oligogalacturonate-specific porin; KEGG: eca:ECA2302 oligogalacturonate-specific porin; oligogalacturonate-specific porin complement(2491355..2492074) Pectobacterium wasabiae WPP163 8530701 YP_003259678.1 CDS trpA NC_013421.1 2492460 2493266 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(2492460..2493266) Pectobacterium wasabiae WPP163 8530702 YP_003259679.1 CDS Pecwa_2302 NC_013421.1 2493266 2494456 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(2493266..2494456) Pectobacterium wasabiae WPP163 8530703 YP_003259680.1 CDS Pecwa_2303 NC_013421.1 2494473 2495840 R monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(2494473..2495840) Pectobacterium wasabiae WPP163 8530704 YP_003259681.1 CDS trpD NC_013421.1 2495848 2496846 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(2495848..2496846) Pectobacterium wasabiae WPP163 8530705 YP_003259682.1 CDS Pecwa_2305 NC_013421.1 2496915 2497493 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(2496915..2497493) Pectobacterium wasabiae WPP163 8530706 YP_003259683.1 CDS Pecwa_2306 NC_013421.1 2497493 2499055 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(2497493..2499055) Pectobacterium wasabiae WPP163 8530707 YP_003259684.1 CDS Pecwa_2307 NC_013421.1 2499357 2500394 R SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA2295 AraC family transcription regulator; AraC family transcriptional regulator complement(2499357..2500394) Pectobacterium wasabiae WPP163 8530708 YP_003259685.1 CDS Pecwa_2308 NC_013421.1 2500821 2502653 D PFAM: glycosyl transferase family 2; KEGG: eca:ECA2294 glycosyl transferase; family 2 glycosyl transferase 2500821..2502653 Pectobacterium wasabiae WPP163 8530709 YP_003259686.1 CDS Pecwa_2309 NC_013421.1 2502772 2503644 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: eca:ECA2293 phosphoesterase; PHP domain-containing protein 2502772..2503644 Pectobacterium wasabiae WPP163 8530710 YP_003259687.1 CDS Pecwa_2310 NC_013421.1 2503787 2504407 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: eca:ECA2292 hypothetical protein; hypothetical protein 2503787..2504407 Pectobacterium wasabiae WPP163 8530711 YP_003259688.1 CDS Pecwa_2311 NC_013421.1 2504569 2505453 D catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B 2504569..2505453 Pectobacterium wasabiae WPP163 8530712 YP_003259689.1 CDS Pecwa_2312 NC_013421.1 2505536 2506126 R catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(2505536..2506126) Pectobacterium wasabiae WPP163 8530713 YP_003259690.1 CDS Pecwa_2313 NC_013421.1 2506144 2506905 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pct:PC1_2012 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(2506144..2506905) Pectobacterium wasabiae WPP163 8530714 YP_003259691.1 CDS Pecwa_2314 NC_013421.1 2507264 2508310 D SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 2507264..2508310 Pectobacterium wasabiae WPP163 8530715 YP_003259692.1 CDS Pecwa_2315 NC_013421.1 2508366 2508635 R PFAM: protein of unknown function DUF2498; KEGG: eca:ECA2287 hypothetical protein; hypothetical protein complement(2508366..2508635) Pectobacterium wasabiae WPP163 8530716 YP_003259693.1 CDS Pecwa_2316 NC_013421.1 2508961 2511561 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2508961..2511561 Pectobacterium wasabiae WPP163 8530717 YP_003259694.1 CDS cysB NC_013421.1 2512002 2512976 D LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 2512002..2512976 Pectobacterium wasabiae WPP163 8530718 YP_003259695.1 CDS tppB NC_013421.1 2513091 2514611 R mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; tripeptide transporter permease complement(2513091..2514611) Pectobacterium wasabiae WPP163 8530719 YP_003259696.1 CDS Pecwa_2319 NC_013421.1 2515270 2515905 R DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines; endonuclease III complement(2515270..2515905) Pectobacterium wasabiae WPP163 8530720 YP_003259697.1 CDS Pecwa_2320 NC_013421.1 2515902 2516609 R in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE complement(2515902..2516609) Pectobacterium wasabiae WPP163 8530721 YP_003259698.1 CDS Pecwa_2321 NC_013421.1 2516606 2517235 R part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG complement(2516606..2517235) Pectobacterium wasabiae WPP163 8530722 YP_003259699.1 CDS rnfD NC_013421.1 2517246 2518301 R RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD complement(2517246..2518301) Pectobacterium wasabiae WPP163 8530723 YP_003259700.1 CDS Pecwa_2323 NC_013421.1 2518302 2520515 R part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC complement(2518302..2520515) Pectobacterium wasabiae WPP163 8530724 YP_003259701.1 CDS Pecwa_2324 NC_013421.1 2520508 2521086 R part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB complement(2520508..2521086) Pectobacterium wasabiae WPP163 8530725 YP_003259702.1 CDS Pecwa_2325 NC_013421.1 2521086 2521667 R TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: pct:PC1_2025 electron transport complex, RnfABCDGE type, subunit alpha; Na(+)-translocating NADH-quinone reductase subunit E complement(2521086..2521667) Pectobacterium wasabiae WPP163 8530726 YP_003259703.1 CDS Pecwa_2326 NC_013421.1 2521895 2522110 R YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; oriC-binding nucleoid-associated protein complement(2521895..2522110) Pectobacterium wasabiae WPP163 8530727 YP_003259704.1 CDS Pecwa_2327 NC_013421.1 2522374 2523879 R catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase complement(2522374..2523879) Pectobacterium wasabiae WPP163 8530728 YP_003259705.1 CDS Pecwa_2328 NC_013421.1 2523917 2525602 R catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase complement(2523917..2525602) Pectobacterium wasabiae WPP163 8530729 YP_003259706.1 CDS Pecwa_2329 NC_013421.1 2525977 2526960 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA2273 L-arabinose-binding periplasmic protein; periplasmic binding protein/LacI transcriptional regulator 2525977..2526960 Pectobacterium wasabiae WPP163 8530730 YP_003259707.1 CDS araG NC_013421.1 2527057 2528580 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2527057..2528580 Pectobacterium wasabiae WPP163 8530731 YP_003259708.1 CDS araH NC_013421.1 2528599 2529585 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 2528599..2529585 Pectobacterium wasabiae WPP163 8530732 YP_003259709.1 CDS Pecwa_2332 NC_013421.1 2529798 2530730 D positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; AraC family transcriptional regulator 2529798..2530730 Pectobacterium wasabiae WPP163 8530733 YP_003259710.1 CDS Pecwa_2333 NC_013421.1 2530847 2531893 D PFAM: oxidoreductase domain protein; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: pct:PC1_2033 oxidoreductase domain protein; oxidoreductase 2530847..2531893 Pectobacterium wasabiae WPP163 8530734 YP_003259711.1 CDS Pecwa_2334 NC_013421.1 2532011 2533000 D PFAM: sodium symporter; KEGG: eca:ECA2268 sodium bile acid symporter; sodium symporter 2532011..2533000 Pectobacterium wasabiae WPP163 8530735 YP_003259712.1 CDS Pecwa_2335 NC_013421.1 2533279 2534340 D PFAM: protein of unknown function DUF1176; KEGG: pmy:Pmen_3175 hypothetical protein; hypothetical protein 2533279..2534340 Pectobacterium wasabiae WPP163 8530736 YP_003259713.1 CDS Pecwa_2336 NC_013421.1 2534623 2535081 D PFAM: Calcium/calmodulin dependent protein kinase II association-domain protein; KEGG: pct:PC1_2035 calcium/calmodulin dependent protein kinase II association-domain protein; calcium/calmodulin dependent protein kinase II association-domain-containing protein 2534623..2535081 Pectobacterium wasabiae WPP163 8530737 YP_003259714.1 CDS Pecwa_2337 NC_013421.1 2535178 2536191 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(2535178..2536191) Pectobacterium wasabiae WPP163 8530738 YP_003259715.1 CDS Pecwa_2338 NC_013421.1 2536313 2537290 R KEGG: pct:PC1_2037 bile acid:sodium symporter; bile acid:sodium symporter complement(2536313..2537290) Pectobacterium wasabiae WPP163 8530739 YP_003259716.1 CDS Pecwa_2339 NC_013421.1 2537392 2538942 R PFAM: protein of unknown function DUF945; KEGG: pct:PC1_2038 hypothetical protein; hypothetical protein complement(2537392..2538942) Pectobacterium wasabiae WPP163 8530740 YP_003259717.1 CDS Pecwa_2340 NC_013421.1 2539062 2540234 R KEGG: eca:ECA2263 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase complement(2539062..2540234) Pectobacterium wasabiae WPP163 8530741 YP_003259718.1 CDS fumC NC_013421.1 2540474 2541871 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2540474..2541871 Pectobacterium wasabiae WPP163 8530742 YP_003259719.1 CDS Pecwa_2342 NC_013421.1 2541935 2542873 R binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein complement(2541935..2542873) Pectobacterium wasabiae WPP163 8530743 YP_003259720.1 CDS Pecwa_2343 NC_013421.1 2543040 2544308 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2260 transporter; major facilitator superfamily protein complement(2543040..2544308) Pectobacterium wasabiae WPP163 8530744 YP_003259721.1 CDS Pecwa_2344 NC_013421.1 2544422 2545318 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2259 LysR family transcriptional regulator; LysR family transcriptional regulator 2544422..2545318 Pectobacterium wasabiae WPP163 8530745 YP_003259722.1 CDS Pecwa_2345 NC_013421.1 2545500 2546717 D PFAM: ROK family protein; KEGG: eca:ECA2258 transcriptional regulator; ROK family protein 2545500..2546717 Pectobacterium wasabiae WPP163 8530746 YP_003259723.1 CDS Pecwa_2346 NC_013421.1 2546850 2547515 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2546850..2547515 Pectobacterium wasabiae WPP163 8530747 YP_003259724.1 CDS Pecwa_2347 NC_013421.1 2547617 2549104 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_2046 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 2547617..2549104 Pectobacterium wasabiae WPP163 8530748 YP_003259725.1 CDS Pecwa_2348 NC_013421.1 2549154 2549453 R PFAM: protein of unknown function DUF1161; KEGG: eca:ECA2255 hypothetical protein; hypothetical protein complement(2549154..2549453) Pectobacterium wasabiae WPP163 8530749 YP_003259726.1 CDS Pecwa_2349 NC_013421.1 2549547 2550158 R KEGG: pct:PC1_2048 lipoprotein; lipoprotein complement(2549547..2550158) Pectobacterium wasabiae WPP163 8530750 YP_003259727.1 CDS Pecwa_2350 NC_013421.1 2550317 2550667 R PFAM: protein of unknown function DUF1283; KEGG: pct:PC1_2049 hypothetical protein; hypothetical protein complement(2550317..2550667) Pectobacterium wasabiae WPP163 8530751 YP_003259728.1 CDS Pecwa_2351 NC_013421.1 2550933 2551682 R NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; 3-hydroxy acid dehydrogenase complement(2550933..2551682) Pectobacterium wasabiae WPP163 8530752 YP_003259729.1 CDS Pecwa_2352 NC_013421.1 2551930 2553114 R PFAM: aminotransferase class I and II; KEGG: eca:ECA2250 aminotransferase; class I and II aminotransferase complement(2551930..2553114) Pectobacterium wasabiae WPP163 8530753 YP_003259730.1 CDS Pecwa_2353 NC_013421.1 2553583 2553813 D 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase 2553583..2553813 Pectobacterium wasabiae WPP163 8530754 YP_003259731.1 CDS Pecwa_2354 NC_013421.1 2553880 2555367 R PFAM: pyridoxal-dependent decarboxylase; KEGG: pct:PC1_2059 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase complement(2553880..2555367) Pectobacterium wasabiae WPP163 8530755 YP_003259732.1 CDS Pecwa_2355 NC_013421.1 2555386 2556768 R catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase complement(2555386..2556768) Pectobacterium wasabiae WPP163 8530756 YP_003259733.1 CDS Pecwa_2356 NC_013421.1 2557178 2558473 R PFAM: protein of unknown function DUF187; KEGG: eca:ECA2240 lipoprotein; hypothetical protein complement(2557178..2558473) Pectobacterium wasabiae WPP163 8530757 YP_003259734.1 CDS Pecwa_2357 NC_013421.1 2558479 2558766 R PFAM: protein of unknown function DUF2132; KEGG: eca:ECA2239 hypothetical protein; hypothetical protein complement(2558479..2558766) Pectobacterium wasabiae WPP163 8530758 YP_003259735.1 CDS Pecwa_2358 NC_013421.1 2559329 2559571 D hypothetical protein 2559329..2559571 Pectobacterium wasabiae WPP163 8530759 YP_003259736.1 CDS Pecwa_2359 NC_013421.1 2559612 2560217 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ebw:BWG_1235 inner membrane protein; CDP-alcohol phosphatidyltransferase 2559612..2560217 Pectobacterium wasabiae WPP163 8530760 YP_003259737.1 CDS Pecwa_2360 NC_013421.1 2560349 2562109 D KEGG: ecl:EcolC_2248 hypothetical protein; hypothetical protein 2560349..2562109 Pectobacterium wasabiae WPP163 8530761 YP_003259738.1 CDS Pecwa_2361 NC_013421.1 2562106 2563392 D PFAM: Dual specificity protein phosphatase; phosphoesterase PA-phosphatase related; SMART: Dual specificity phosphatase, subgroup, catalytic domain; KEGG: ecl:EcolC_2247 dual specificity phosphatase; dual specificity phosphatase 2562106..2563392 Pectobacterium wasabiae WPP163 8530762 YP_003259739.1 CDS Pecwa_2362 NC_013421.1 2563368 2563778 D KEGG: ypb:YPTS_1097 hypothetical protein; hypothetical protein 2563368..2563778 Pectobacterium wasabiae WPP163 8530763 YP_003259740.1 CDS Pecwa_2363 NC_013421.1 2564038 2564400 R KEGG: eca:ECA2237 hypothetical protein; hypothetical protein complement(2564038..2564400) Pectobacterium wasabiae WPP163 8530764 YP_003259741.1 CDS Pecwa_2364 NC_013421.1 2564466 2564909 R KEGG: eca:ECA2236 hypothetical protein; hypothetical protein complement(2564466..2564909) Pectobacterium wasabiae WPP163 8530765 YP_003259742.1 CDS Pecwa_2365 NC_013421.1 2565140 2565913 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mms:mma_1110 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2565140..2565913) Pectobacterium wasabiae WPP163 8530766 YP_003259743.1 CDS Pecwa_2366 NC_013421.1 2566121 2566417 R PFAM: YCII-related; KEGG: pst:PSPTO_4066 hypothetical protein; hypothetical protein complement(2566121..2566417) Pectobacterium wasabiae WPP163 8530767 YP_003259744.1 CDS Pecwa_2367 NC_013421.1 2566622 2567428 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_3218 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2566622..2567428) Pectobacterium wasabiae WPP163 8530768 YP_003259745.1 CDS Pecwa_2368 NC_013421.1 2567967 2568101 D hypothetical protein 2567967..2568101 Pectobacterium wasabiae WPP163 8530769 YP_003259746.1 CDS Pecwa_2369 NC_013421.1 2568138 2568614 D PFAM: helix-turn-helix HxlR type; KEGG: eca:ECA2235 transcriptional regulator; HxlR family transcriptional regulator 2568138..2568614 Pectobacterium wasabiae WPP163 8530770 YP_003259747.1 CDS Pecwa_2370 NC_013421.1 2568721 2569629 D PFAM: alpha/beta hydrolase fold; KEGG: eca:ECA2233 hydrolase; alpha/beta hydrolase 2568721..2569629 Pectobacterium wasabiae WPP163 8530771 YP_003259748.1 CDS Pecwa_2371 NC_013421.1 2570154 2570420 D KEGG: eca:ECA2228 hypothetical protein; hypothetical protein 2570154..2570420 Pectobacterium wasabiae WPP163 8530772 YP_003259749.1 CDS Pecwa_2372 NC_013421.1 2570486 2572459 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: pct:PC1_2086 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2570486..2572459) Pectobacterium wasabiae WPP163 8530773 YP_003259750.1 CDS Pecwa_2373 NC_013421.1 2572629 2573117 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA2225 acetyltransferase; N-acetyltransferase GCN5 complement(2572629..2573117) Pectobacterium wasabiae WPP163 8530774 YP_003259751.1 CDS Pecwa_2374 NC_013421.1 2573262 2574467 R PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_2088 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2573262..2574467) Pectobacterium wasabiae WPP163 8530775 YP_003259752.1 CDS Pecwa_2375 NC_013421.1 2574596 2575150 R PFAM: regulatory protein TetR; KEGG: pct:PC1_2089 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2574596..2575150) Pectobacterium wasabiae WPP163 8530776 YP_003259753.1 CDS Pecwa_2376 NC_013421.1 2575258 2575653 R PFAM: cytochrome b562; KEGG: pct:PC1_2090 cytochrome b562; cytochrome b562 complement(2575258..2575653) Pectobacterium wasabiae WPP163 8530777 YP_003259754.1 CDS Pecwa_2378 NC_013421.1 2576582 2577484 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1479 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2576582..2577484) Pectobacterium wasabiae WPP163 8530779 YP_003259755.1 CDS Pecwa_2379 NC_013421.1 2577576 2578592 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: eca:ECA1480 zinc-binding oxidoreductase; alcohol dehydrogenase zinc-binding domain protein 2577576..2578592 Pectobacterium wasabiae WPP163 8530780 YP_003259756.1 CDS Pecwa_2380 NC_013421.1 2578927 2579616 D PFAM: Rare lipoprotein A; KEGG: eca:ECA2220 cellulase; Rare lipoprotein A 2578927..2579616 Pectobacterium wasabiae WPP163 8530781 YP_003259757.1 CDS Pecwa_2381 NC_013421.1 2579907 2581292 D KEGG: eca:ECA2219 virulence effector protein; virulence effector protein 2579907..2581292 Pectobacterium wasabiae WPP163 8530782 YP_003259758.1 CDS Pecwa_2382 NC_013421.1 2581295 2584282 D PFAM: virulence protein SrfB; KEGG: pct:PC1_2094 virulence protein SrfB; virulence protein SrfB 2581295..2584282 Pectobacterium wasabiae WPP163 8530783 YP_003259759.1 CDS Pecwa_2383 NC_013421.1 2584279 2586726 D PFAM: virulence effector, SrfC; KEGG: pct:PC1_2095 virulence factor; virulence effector, SrfC 2584279..2586726 Pectobacterium wasabiae WPP163 8530784 YP_003259760.1 CDS Pecwa_2384 NC_013421.1 2586948 2587850 R PFAM: endonuclease/exonuclease/phosphatase; KEGG: cko:CKO_01684 hypothetical protein; endonuclease/exonuclease/phosphatase complement(2586948..2587850) Pectobacterium wasabiae WPP163 8530785 YP_003259761.1 CDS Pecwa_2385 NC_013421.1 2587913 2588722 R transcriptional repressor for the agaZVWA and agaSYBCDI operons; AgaR family transcriptional regulator complement(2587913..2588722) Pectobacterium wasabiae WPP163 8530786 YP_003259762.1 CDS Pecwa_2386 NC_013421.1 2588968 2590260 D TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: cko:CKO_04530 hypothetical protein; D-tagatose-bisphosphate aldolase non-catalytic subunit 2588968..2590260 Pectobacterium wasabiae WPP163 8530787 YP_003259763.1 CDS Pecwa_2387 NC_013421.1 2590286 2590759 D catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake;involved in N-acetylgalactosamine transport; PTS system N-acetylgalactosamine-specific transporter subunit IIB 2590286..2590759 Pectobacterium wasabiae WPP163 8530788 YP_003259764.1 CDS Pecwa_2388 NC_013421.1 2590770 2591552 D PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: cko:CKO_04532 hypothetical protein; PTS sorbose-specific transporter subunit IIC 2590770..2591552 Pectobacterium wasabiae WPP163 8530789 YP_003259765.1 CDS Pecwa_2389 NC_013421.1 2591542 2592417 D PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: cko:CKO_04533 hypothetical protein; PTS system mannose/fructose/sorbose family transporter subunit IID 2591542..2592417 Pectobacterium wasabiae WPP163 8530790 YP_003259766.1 CDS Pecwa_2390 NC_013421.1 2592433 2592867 D PFAM: PTS system fructose subfamily IIA component; KEGG: cko:CKO_04534 hypothetical protein; PTS system fructose subfamily transporter subunit IIA 2592433..2592867 Pectobacterium wasabiae WPP163 8530791 YP_003259767.1 CDS Pecwa_2391 NC_013421.1 2592864 2593997 D KEGG: ecw:EcE24377A_3617 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 2592864..2593997 Pectobacterium wasabiae WPP163 8530792 YP_003259768.1 CDS Pecwa_2392 NC_013421.1 2594288 2595442 D TIGRFAM: sugar isomerase, AgaS family; PFAM: sugar isomerase (SIS); KEGG: cko:CKO_04536 hypothetical protein; sugar isomerase 2594288..2595442 Pectobacterium wasabiae WPP163 8530793 YP_003259769.1 CDS kbaY NC_013421.1 2595455 2596333 D catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase 2595455..2596333 Pectobacterium wasabiae WPP163 8530794 YP_003259770.1 CDS Pecwa_2394 NC_013421.1 2596409 2598310 D KEGG: ecc:c1174 hypothetical protein; hypothetical protein 2596409..2598310 Pectobacterium wasabiae WPP163 8530795 YP_003259771.1 CDS Pecwa_2395 NC_013421.1 2598446 2599801 R PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_2102 extracellular solute-binding protein family 1; extracellular solute-binding protein complement(2598446..2599801) Pectobacterium wasabiae WPP163 8530796 YP_003259772.1 CDS Pecwa_2396 NC_013421.1 2599875 2601170 R PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: eca:ECA2209 oxidoreductase; oxidoreductase domain-containing protein complement(2599875..2601170) Pectobacterium wasabiae WPP163 8530797 YP_003259773.1 CDS Pecwa_2397 NC_013421.1 2601668 2602201 D KEGG: eca:ECA2208 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 2601668..2602201 Pectobacterium wasabiae WPP163 8530798 YP_003259774.1 CDS Pecwa_2398 NC_013421.1 2602471 2603217 D Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2602471..2603217 Pectobacterium wasabiae WPP163 8530799 YP_003259775.1 CDS Pecwa_2399 NC_013421.1 2603405 2604355 D with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2603405..2604355 Pectobacterium wasabiae WPP163 8530800 YP_003259776.1 CDS pntB NC_013421.1 2604481 2605869 R catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 subunit betas; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase complement(2604481..2605869) Pectobacterium wasabiae WPP163 8530801 YP_003259777.1 CDS pntA NC_013421.1 2605880 2607409 R forms a tetramer composed of 2 subunit alphas and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha complement(2605880..2607409) Pectobacterium wasabiae WPP163 8530802 YP_003259778.1 CDS Pecwa_2402 NC_013421.1 2607992 2608945 D PFAM: protein of unknown function DUF1471; KEGG: eca:ECA2203 hypothetical protein; hypothetical protein 2607992..2608945 Pectobacterium wasabiae WPP163 8530803 YP_003259779.1 CDS Pecwa_2403 NC_013421.1 2609027 2609881 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2609027..2609881) Pectobacterium wasabiae WPP163 8530804 YP_003259780.1 CDS Pecwa_2404 NC_013421.1 2609957 2610766 R KEGG: eca:ECA2193 transcriptional regulator; transcriptional regulator complement(2609957..2610766) Pectobacterium wasabiae WPP163 8530805 YP_003259781.1 CDS Pecwa_2405 NC_013421.1 2610769 2611164 R PFAM: invasion gene expression up-regulator SirB; KEGG: eca:ECA2192 hypothetical protein; invasion gene expression up-regulator SirB complement(2610769..2611164) Pectobacterium wasabiae WPP163 8530806 YP_003259782.1 CDS Pecwa_2406 NC_013421.1 2611176 2612021 R HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(2611176..2612021) Pectobacterium wasabiae WPP163 8530807 YP_003259783.1 CDS prfA NC_013421.1 2612021 2613103 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(2612021..2613103) Pectobacterium wasabiae WPP163 8530808 YP_003259784.1 CDS hemA NC_013421.1 2613137 2614393 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(2613137..2614393) Pectobacterium wasabiae WPP163 8530809 YP_003259785.1 CDS lolB NC_013421.1 2614625 2615248 D Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 2614625..2615248 Pectobacterium wasabiae WPP163 8530810 YP_003259786.1 CDS ipk NC_013421.1 2615252 2616112 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2615252..2616112 Pectobacterium wasabiae WPP163 8530811 YP_003259787.1 CDS Pecwa_2411 NC_013421.1 2616250 2617197 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2616250..2617197 Pectobacterium wasabiae WPP163 8530812 YP_003259788.1 CDS Pecwa_2412 NC_013421.1 2617369 2617638 R YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; hypothetical protein complement(2617369..2617638) Pectobacterium wasabiae WPP163 8530813 YP_003259789.1 CDS Pecwa_2413 NC_013421.1 2617951 2618538 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2617951..2618538 Pectobacterium wasabiae WPP163 8530814 YP_003259790.1 CDS Pecwa_2414 NC_013421.1 2618668 2619759 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2618668..2619759 Pectobacterium wasabiae WPP163 8530815 YP_003259791.1 CDS Pecwa_2416 NC_013421.1 2620207 2621430 R hypothetical protein complement(2620207..2621430) Pectobacterium wasabiae WPP163 8530817 YP_003259792.1 CDS Pecwa_2417 NC_013421.1 2622396 2622890 R KEGG: ent:Ent638_1538 lipoprotein; lipoprotein complement(2622396..2622890) Pectobacterium wasabiae WPP163 8530818 YP_003259793.1 CDS Pecwa_2418 NC_013421.1 2622887 2623495 R KEGG: ent:Ent638_1537 hypothetical protein; hypothetical protein complement(2622887..2623495) Pectobacterium wasabiae WPP163 8530819 YP_003259794.1 CDS Pecwa_2419 NC_013421.1 2623607 2624146 D KEGG: sec:SC3448 hypothetical protein; hypothetical protein 2623607..2624146 Pectobacterium wasabiae WPP163 8530820 YP_003259795.1 CDS Pecwa_2421 NC_013421.1 2624480 2624827 R KEGG: ypy:YPK_0771 hypothetical protein; hypothetical protein complement(2624480..2624827) Pectobacterium wasabiae WPP163 8530822 YP_003259796.1 CDS Pecwa_2422 NC_013421.1 2624931 2625323 R KEGG: bam:Bamb_0369 hypothetical protein; hypothetical protein complement(2624931..2625323) Pectobacterium wasabiae WPP163 8530823 YP_003259797.1 CDS Pecwa_2423 NC_013421.1 2625325 2625480 R hypothetical protein complement(2625325..2625480) Pectobacterium wasabiae WPP163 8530824 YP_003259798.1 CDS Pecwa_2426 NC_013421.1 2625946 2626404 R hypothetical protein complement(2625946..2626404) Pectobacterium wasabiae WPP163 8530827 YP_003259799.1 CDS Pecwa_2429 NC_013421.1 2627257 2627631 R hypothetical protein complement(2627257..2627631) Pectobacterium wasabiae WPP163 8530830 YP_003259800.1 CDS Pecwa_2432 NC_013421.1 2630119 2630457 D PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: eca:ECA3392 hypothetical protein; hypothetical protein 2630119..2630457 Pectobacterium wasabiae WPP163 8530833 YP_003259801.1 CDS Pecwa_2433 NC_013421.1 2630526 2630966 R KEGG: dze:Dd1591_1505 hypothetical protein; hypothetical protein complement(2630526..2630966) Pectobacterium wasabiae WPP163 8530834 YP_003259802.1 CDS Pecwa_2434 NC_013421.1 2630966 2635012 R PFAM: RHS protein; hypothetical protein; KEGG: esa:ESA_03913 hypothetical protein; RHS protein complement(2630966..2635012) Pectobacterium wasabiae WPP163 8530835 YP_003259803.1 CDS Pecwa_2435 NC_013421.1 2635255 2635998 R KEGG: eta:ETA_06440 lipoprotein; lipoprotein complement(2635255..2635998) Pectobacterium wasabiae WPP163 8530836 YP_003259804.1 CDS Pecwa_2436 NC_013421.1 2636061 2636822 R PFAM: ankyrin; SMART: ankyrin; KEGG: eta:ETA_06440 lipoprotein; ankyrin complement(2636061..2636822) Pectobacterium wasabiae WPP163 8530837 YP_003259805.1 CDS Pecwa_2437 NC_013421.1 2636834 2638126 R KEGG: esa:ESA_03915 hypothetical protein; hypothetical protein complement(2636834..2638126) Pectobacterium wasabiae WPP163 8530838 YP_003259806.1 CDS Pecwa_2438 NC_013421.1 2638119 2639270 R PFAM: protein of unknown function DUF2169; KEGG: esa:ESA_03916 hypothetical protein; hypothetical protein complement(2638119..2639270) Pectobacterium wasabiae WPP163 8530839 YP_003259807.1 CDS Pecwa_2439 NC_013421.1 2639273 2641411 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: eta:ETA_06410 rhs element Vgr protein subfamily; ImpA family type VI secretion-associated protein complement(2639273..2641411) Pectobacterium wasabiae WPP163 8530840 YP_003259808.1 CDS Pecwa_2440 NC_013421.1 2641458 2641850 R KEGG: spe:Spro_4188 hypothetical protein; hypothetical protein complement(2641458..2641850) Pectobacterium wasabiae WPP163 8530841 YP_003259809.1 CDS Pecwa_2441 NC_013421.1 2641860 2642465 R KEGG: spe:Spro_4189 hypothetical protein; hypothetical protein complement(2641860..2642465) Pectobacterium wasabiae WPP163 8530842 YP_003259810.1 CDS Pecwa_2442 NC_013421.1 2642478 2643548 R PFAM: pentapeptide repeat protein; KEGG: spe:Spro_4190 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein complement(2642478..2643548) Pectobacterium wasabiae WPP163 8530843 YP_003259811.1 CDS Pecwa_2443 NC_013421.1 2643545 2646085 R PFAM: protein of unknown function DUF2169; pentapeptide repeat protein; KEGG: spe:Spro_4191 pentapeptide repeat-containing protein; hypothetical protein complement(2643545..2646085) Pectobacterium wasabiae WPP163 8530844 YP_003259812.1 CDS Pecwa_2444 NC_013421.1 2646186 2646569 R hypothetical protein complement(2646186..2646569) Pectobacterium wasabiae WPP163 8530845 YP_003259813.1 CDS Pecwa_2445 NC_013421.1 2646854 2647228 R hypothetical protein complement(2646854..2647228) Pectobacterium wasabiae WPP163 8530846 YP_003259814.1 CDS Pecwa_2446 NC_013421.1 2647530 2647910 R hypothetical protein complement(2647530..2647910) Pectobacterium wasabiae WPP163 8530847 YP_003259815.1 CDS Pecwa_2447 NC_013421.1 2647919 2650126 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: spe:Spro_4187 rhs element Vgr protein; ImpA family type VI secretion-associated protein complement(2647919..2650126) Pectobacterium wasabiae WPP163 8530848 YP_003259816.1 CDS Pecwa_2448 NC_013421.1 2650144 2651574 R PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: eta:ETA_06360 serine/threonine protein kinase; serine/threonine protein kinase complement(2650144..2651574) Pectobacterium wasabiae WPP163 8530849 YP_003259817.1 CDS Pecwa_2449 NC_013421.1 2651604 2654213 R KEGG: eta:ETA_06350 ClpA/B-type chaperone; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; ATPase AAA; Clp domain protein; SMART: ATPase AAA; type VI secretion ATPase, ClpV1 family complement(2651604..2654213) Pectobacterium wasabiae WPP163 8530850 YP_003259818.1 CDS Pecwa_2450 NC_013421.1 2654269 2655318 R TIGRFAM: type VI hypothetical protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: esa:ESA_03922 hypothetical protein; hypothetical protein complement(2654269..2655318) Pectobacterium wasabiae WPP163 8530851 YP_003259819.1 CDS Pecwa_2451 NC_013421.1 2655315 2657189 R TIGRFAM: type VI hypothetical protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: eta:ETA_06310 hypothetical protein; hypothetical protein complement(2655315..2657189) Pectobacterium wasabiae WPP163 8530852 YP_003259820.1 CDS Pecwa_2452 NC_013421.1 2657192 2657767 R TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: eta:ETA_06300 hypothetical protein; type VI secretion system lysozyme-like protein complement(2657192..2657767) Pectobacterium wasabiae WPP163 8530853 YP_003259821.1 CDS Pecwa_2453 NC_013421.1 2657757 2658584 R PFAM: virulence protein SciE type; KEGG: eta:ETA_06290 hypothetical protein; virulence protein SciE type complement(2657757..2658584) Pectobacterium wasabiae WPP163 8530854 YP_003259822.1 CDS Pecwa_2454 NC_013421.1 2658601 2659578 R KEGG: eta:ETA_06280 hypothetical protein; hypothetical protein complement(2658601..2659578) Pectobacterium wasabiae WPP163 8530855 YP_003259823.1 CDS Pecwa_2455 NC_013421.1 2659589 2660380 R PFAM: protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: eta:ETA_06270 protein phosphatase 2C-like; protein serine/threonine phosphatase complement(2659589..2660380) Pectobacterium wasabiae WPP163 8530856 YP_003259824.1 CDS Pecwa_2456 NC_013421.1 2660377 2662191 R TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: eta:ETA_06260 forkhead-associated (FHA) protein; FHA domain-containing protein complement(2660377..2662191) Pectobacterium wasabiae WPP163 8530857 YP_003259825.1 CDS Pecwa_2457 NC_013421.1 2662451 2663110 R hypothetical protein complement(2662451..2663110) Pectobacterium wasabiae WPP163 8530858 YP_003259826.1 CDS Pecwa_2458 NC_013421.1 2663127 2663573 R KEGG: cla:Cla_0841 hypothetical protein; hypothetical protein complement(2663127..2663573) Pectobacterium wasabiae WPP163 8530859 YP_003259827.1 CDS Pecwa_2459 NC_013421.1 2663628 2664110 R PFAM: protein of unknown function DUF796; KEGG: esa:ESA_03934 hypothetical protein; hypothetical protein complement(2663628..2664110) Pectobacterium wasabiae WPP163 8530860 YP_003259828.1 CDS Pecwa_2460 NC_013421.1 2664419 2665918 R TIGRFAM: type VI hypothetical protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: esa:ESA_03941 hypothetical protein; hypothetical protein complement(2664419..2665918) Pectobacterium wasabiae WPP163 8530861 YP_003259829.1 CDS Pecwa_2461 NC_013421.1 2665918 2666448 R TIGRFAM: type VI hypothetical protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: eta:ETA_06170 hypothetical protein; hypothetical protein complement(2665918..2666448) Pectobacterium wasabiae WPP163 8530862 YP_003259830.1 CDS Pecwa_2462 NC_013421.1 2666528 2667547 R TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: eta:ETA_06160 hypothetical protein; type VI secretion-associated protein, ImpA family complement(2666528..2667547) Pectobacterium wasabiae WPP163 8530863 YP_003259831.1 CDS Pecwa_2463 NC_013421.1 2667559 2668266 R TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; PFAM: type VI secretion system-associated, BMAA0400; KEGG: esa:ESA_03944 hypothetical protein; type VI secretion-associated protein complement(2667559..2668266) Pectobacterium wasabiae WPP163 8530864 YP_003259832.1 CDS Pecwa_2464 NC_013421.1 2668281 2671904 R TIGRFAM: type VI hypothetical protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: eta:ETA_06140 hypothetical protein; hypothetical protein complement(2668281..2671904) Pectobacterium wasabiae WPP163 8530865 YP_003259833.1 CDS Pecwa_2465 NC_013421.1 2671908 2673149 R TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: type IV / VI secretion system, DotU; OmpA/MotB domain protein; KEGG: eta:ETA_06130 OmpA family protein; hypothetical protein complement(2671908..2673149) Pectobacterium wasabiae WPP163 8530866 YP_003259834.1 CDS Pecwa_2466 NC_013421.1 2673169 2674509 R TIGRFAM: type VI hypothetical protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: esa:ESA_03947 hypothetical protein; hypothetical protein complement(2673169..2674509) Pectobacterium wasabiae WPP163 8530867 YP_003259835.1 CDS Pecwa_2467 NC_013421.1 2674519 2675013 R TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: esa:ESA_03948 hypothetical protein; type VI secretion lipoprotein complement(2674519..2675013) Pectobacterium wasabiae WPP163 8530868 YP_003259836.1 CDS Pecwa_2468 NC_013421.1 2675037 2675618 R KEGG: esa:ESA_03949 hypothetical protein; hypothetical protein complement(2675037..2675618) Pectobacterium wasabiae WPP163 8530869 YP_003259837.1 CDS Pecwa_2469 NC_013421.1 2676635 2677696 R KEGG: pct:PC1_2131 hypothetical protein; hypothetical protein complement(2676635..2677696) Pectobacterium wasabiae WPP163 8530870 YP_003259838.1 CDS Pecwa_2470 NC_013421.1 2677940 2678665 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cko:CKO_00951 hypothetical protein; ABC transporter 2677940..2678665 Pectobacterium wasabiae WPP163 8530871 YP_003259839.1 CDS Pecwa_2471 NC_013421.1 2678665 2679555 D PFAM: ABC transporter; KEGG: mlo:mll8314 ABC transporter permease; ABC transporter 2678665..2679555 Pectobacterium wasabiae WPP163 8530872 YP_003259840.1 CDS Pecwa_2472 NC_013421.1 2679562 2680497 D PFAM: periplasmic solute binding protein; KEGG: cko:CKO_00949 hypothetical protein; periplasmic solute binding protein 2679562..2680497 Pectobacterium wasabiae WPP163 8530873 YP_003259841.1 CDS Pecwa_2473 NC_013421.1 2680537 2681769 D KEGG: cko:CKO_00948 hypothetical protein; hypothetical protein 2680537..2681769 Pectobacterium wasabiae WPP163 8530874 YP_003259842.1 CDS Pecwa_2474 NC_013421.1 2681910 2682503 R KEGG: eca:ECA2172 hypothetical protein; hypothetical protein complement(2681910..2682503) Pectobacterium wasabiae WPP163 8530875 YP_003259843.1 CDS Pecwa_2475 NC_013421.1 2682967 2683890 D KEGG: eca:ECA2171 hypothetical protein; hypothetical protein 2682967..2683890 Pectobacterium wasabiae WPP163 8530876 YP_003259844.1 CDS Pecwa_2476 NC_013421.1 2683905 2685041 D KEGG: eca:ECA2170 hypothetical protein; hypothetical protein 2683905..2685041 Pectobacterium wasabiae WPP163 8530877 YP_003259845.1 CDS Pecwa_2477 NC_013421.1 2685065 2685679 D KEGG: hch:HCH_02830 hypothetical protein; hypothetical protein 2685065..2685679 Pectobacterium wasabiae WPP163 8530878 YP_003259846.1 CDS Pecwa_2478 NC_013421.1 2685684 2686100 R KEGG: eca:ECA2169 hypothetical protein; hypothetical protein complement(2685684..2686100) Pectobacterium wasabiae WPP163 8530879 YP_003259847.1 CDS Pecwa_2479 NC_013421.1 2686119 2686508 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pct:PC1_2137 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2686119..2686508) Pectobacterium wasabiae WPP163 8530880 YP_003259848.1 CDS Pecwa_2480 NC_013421.1 2686560 2687357 R TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: pct:PC1_2138 histidinol-phosphate phosphatase; histidinol-phosphate phosphatase complement(2686560..2687357) Pectobacterium wasabiae WPP163 8530881 YP_003259849.1 CDS Pecwa_2481 NC_013421.1 2687543 2688973 R PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_2140 glycoside hydrolase family 1; cryptic 6-phospho-beta-glucosidase complement(2687543..2688973) Pectobacterium wasabiae WPP163 8530882 YP_003259850.1 CDS Pecwa_2482 NC_013421.1 2689015 2690475 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC complement(2689015..2690475) Pectobacterium wasabiae WPP163 8530883 YP_003259851.1 CDS Pecwa_2483 NC_013421.1 2690838 2691863 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA2164 asc operon repressor; LacI family transcriptional regulator 2690838..2691863 Pectobacterium wasabiae WPP163 8530884 YP_003259852.1 CDS Pecwa_2484 NC_013421.1 2691949 2692176 R KEGG: pct:PC1_2144 hypothetical protein; hypothetical protein complement(2691949..2692176) Pectobacterium wasabiae WPP163 8530885 YP_003259853.1 CDS Pecwa_2485 NC_013421.1 2692350 2692856 R PFAM: protein of unknown function DUF1706; KEGG: eca:ECA2162 hypothetical protein; hypothetical protein complement(2692350..2692856) Pectobacterium wasabiae WPP163 8530886 YP_003259854.1 CDS Pecwa_2486 NC_013421.1 2692948 2693928 R TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: eca:ECA2161 luciferase-like monooxygenase; luciferase family oxidoreductase, group 1 complement(2692948..2693928) Pectobacterium wasabiae WPP163 8530887 YP_003259855.1 CDS Pecwa_2487 NC_013421.1 2694176 2695372 D KEGG: eca:ECA2160 peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2694176..2695372 Pectobacterium wasabiae WPP163 8530888 YP_003259856.1 CDS Pecwa_2488 NC_013421.1 2695554 2696099 R PFAM: flavin reductase domain protein FMN-binding; KEGG: eca:ECA2159 4-hydroxyphenylacetate 3-monooxygenase, reductase component; flavin reductase complement(2695554..2696099) Pectobacterium wasabiae WPP163 8530889 YP_003259857.1 CDS Pecwa_2489 NC_013421.1 2696381 2697709 D KEGG: pct:PC1_2149 hypothetical protein; hypothetical protein 2696381..2697709 Pectobacterium wasabiae WPP163 8530890 YP_003259858.1 CDS Pecwa_2490 NC_013421.1 2697732 2698667 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA2157 ABC transporter substrate binding protein; family 3 extracellular solute-binding protein 2697732..2698667 Pectobacterium wasabiae WPP163 8530891 YP_003259859.1 CDS Pecwa_2491 NC_013421.1 2698739 2699722 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pct:PC1_2151 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2698739..2699722 Pectobacterium wasabiae WPP163 8530892 YP_003259860.1 CDS Pecwa_2492 NC_013421.1 2699785 2700339 D PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA2155 acetyltransferase; N-acetyltransferase GCN5 2699785..2700339 Pectobacterium wasabiae WPP163 8530893 YP_003259861.1 CDS Pecwa_2493 NC_013421.1 2700406 2701371 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2154 ABC transporter permease; polar amino acid ABC transporter inner membrane protein 2700406..2701371 Pectobacterium wasabiae WPP163 8530894 YP_003259862.1 CDS Pecwa_2494 NC_013421.1 2701387 2702211 D PFAM: ABC transporter; SMC domain protein; SMART: ATPase AAA; KEGG: pct:PC1_2154 ABC transporter; ABC transporter 2701387..2702211 Pectobacterium wasabiae WPP163 8530895 YP_003259863.1 CDS Pecwa_2495 NC_013421.1 2702284 2702583 R PFAM: hypothetical protein; KEGG: eca:ECA2150 hypothetical protein; hypothetical protein complement(2702284..2702583) Pectobacterium wasabiae WPP163 8530896 YP_003259864.1 CDS Pecwa_2496 NC_013421.1 2702922 2703620 R KEGG: pct:PC1_2157 UreA ABC transporter ATP-binding protein UrtE; TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA; urea ABC transporter ATP-binding protein complement(2702922..2703620) Pectobacterium wasabiae WPP163 8530897 YP_003259865.1 CDS Pecwa_2497 NC_013421.1 2703622 2704443 R TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter; KEGG: pct:PC1_2158 UreA ABC transporter ATP-binding protein UrtD; urea ABC transporter ATP-binding protein complement(2703622..2704443) Pectobacterium wasabiae WPP163 8530898 YP_003259866.1 CDS Pecwa_2498 NC_013421.1 2704436 2705524 R TIGRFAM: urea ABC transporter permease; PFAM: inner-membrane translocator; KEGG: eca:ECA2146 branched-chain amino acid transporter, permease; urea ABC transporter permease complement(2704436..2705524) Pectobacterium wasabiae WPP163 8530899 YP_003259867.1 CDS Pecwa_2499 NC_013421.1 2705524 2707143 R TIGRFAM: urea ABC transporter permease; PFAM: inner-membrane translocator; KEGG: pct:PC1_2160 UreA ABC transporter permease UrtB; urea ABC transporter permease complement(2705524..2707143) Pectobacterium wasabiae WPP163 8530900 YP_003259868.1 CDS Pecwa_2500 NC_013421.1 2707481 2708749 R TIGRFAM: urea ABC transporter substrate-binding protein; PFAM: extracellular ligand-binding receptor; KEGG: pct:PC1_2161 UreA ABC transporter UreA binding protein; urea ABC transporter substrate-binding protein complement(2707481..2708749) Pectobacterium wasabiae WPP163 8530901 YP_003259869.1 CDS Pecwa_2501 NC_013421.1 2708746 2709534 R PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pct:PC1_2162 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2708746..2709534) Pectobacterium wasabiae WPP163 8530902 YP_003259870.1 CDS Pecwa_2502 NC_013421.1 2709571 2713185 R KEGG: eca:ECA2142 UreA amidolyase; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; SMART: allophanate hydrolase subunit 2; allophanate hydrolase subunit 1; urea carboxylase complement(2709571..2713185) Pectobacterium wasabiae WPP163 8530903 YP_003259871.1 CDS Pecwa_2503 NC_013421.1 2713178 2714980 R catalyzes the hydrolysis of allophanate; allophanate hydrolase complement(2713178..2714980) Pectobacterium wasabiae WPP163 8530904 YP_003259872.1 CDS Pecwa_2504 NC_013421.1 2715186 2716862 R PFAM: glycoside hydrolase family 43; KEGG: kpe:KPK_0598 xylan 1,4-beta-xylosidase; xylan 1,4-beta-xylosidase complement(2715186..2716862) Pectobacterium wasabiae WPP163 8530905 YP_003259873.1 CDS Pecwa_2505 NC_013421.1 2716966 2718294 R uncharacterized member of the GPH family of galactose-pentose-hexuronide transporters; symporter YagG complement(2716966..2718294) Pectobacterium wasabiae WPP163 8530906 YP_003259874.1 CDS Pecwa_2506 NC_013421.1 2718424 2719335 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: kpe:KPK_0599 transcriptional regulator, AraC family; AraC family transcriptional regulator 2718424..2719335 Pectobacterium wasabiae WPP163 8530907 YP_003259875.1 CDS Pecwa_2507 NC_013421.1 2719357 2720364 R PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: pct:PC1_2165 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(2719357..2720364) Pectobacterium wasabiae WPP163 8530908 YP_003259876.1 CDS Pecwa_2508 NC_013421.1 2720511 2720687 D KEGG: eca:ECA2139 hypothetical protein; hypothetical protein 2720511..2720687 Pectobacterium wasabiae WPP163 8530909 YP_003259877.1 CDS Pecwa_2509 NC_013421.1 2721209 2722267 D PFAM: oligogalacturonate-specific porin; KEGG: pct:PC1_2168 oligogalacturonate-specific porin; oligogalacturonate-specific porin 2721209..2722267 Pectobacterium wasabiae WPP163 8530910 YP_003259878.1 CDS Pecwa_2510 NC_013421.1 2722387 2723151 D PFAM: oligogalacturonate-specific porin; KEGG: pct:PC1_2169 oligogalacturonate-specific porin; oligogalacturonate-specific porin 2722387..2723151 Pectobacterium wasabiae WPP163 8530911 YP_003259879.1 CDS Pecwa_2511 NC_013421.1 2723237 2724943 D PFAM: periplasmic pectate lyase; KEGG: pct:PC1_2170 pectate lyase; pectate lyase 2723237..2724943 Pectobacterium wasabiae WPP163 8530912 YP_003259880.1 CDS Pecwa_2512 NC_013421.1 2725111 2726232 R PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_2171 extracellular solute-binding protein family 1; extracellular solute-binding protein complement(2725111..2726232) Pectobacterium wasabiae WPP163 8530913 YP_003259881.1 CDS Pecwa_2513 NC_013421.1 2726872 2727198 R hypothetical protein complement(2726872..2727198) Pectobacterium wasabiae WPP163 8530914 YP_003259882.1 CDS Pecwa_2514 NC_013421.1 2727246 2727809 R KEGG: ank:AnaeK_3328 hypothetical protein; hypothetical protein complement(2727246..2727809) Pectobacterium wasabiae WPP163 8530915 YP_003259883.1 CDS Pecwa_2515 NC_013421.1 2727887 2728270 R KEGG: eca:ECA0397 hypothetical protein; hypothetical protein complement(2727887..2728270) Pectobacterium wasabiae WPP163 8530916 YP_003259884.1 CDS Pecwa_2516 NC_013421.1 2728423 2728818 R KEGG: eca:ECA0398 hypothetical protein; hypothetical protein complement(2728423..2728818) Pectobacterium wasabiae WPP163 8530917 YP_003259885.1 CDS Pecwa_2517 NC_013421.1 2729113 2729466 R hypothetical protein complement(2729113..2729466) Pectobacterium wasabiae WPP163 8530918 YP_003259886.1 CDS Pecwa_2519 NC_013421.1 2730157 2730615 R PFAM: transposase IS200-family protein; KEGG: ypk:y1204 transposase; transposase IS200-family protein complement(2730157..2730615) Pectobacterium wasabiae WPP163 8530920 YP_003259887.1 CDS Pecwa_2520 NC_013421.1 2730572 2730760 R KEGG: ecz:ECS88_0034 hypothetical protein; hypothetical protein complement(2730572..2730760) Pectobacterium wasabiae WPP163 8530921 YP_003259888.1 CDS Pecwa_2521 NC_013421.1 2730793 2731023 R KEGG: pay:PAU_00446 hypothetical protein; hypothetical protein complement(2730793..2731023) Pectobacterium wasabiae WPP163 8530922 YP_003259889.1 CDS Pecwa_2522 NC_013421.1 2731035 2748980 R TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: eca:ECA2118 hemolysin/hemagglutinin-like protein HecA precursor; filamentous hemagglutinin family outer membrane protein complement(2731035..2748980) Pectobacterium wasabiae WPP163 8530923 YP_003259890.1 CDS Pecwa_2523 NC_013421.1 2749017 2750681 R PFAM: polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: eca:ECA2116 hemolysin activator protein; polypeptide-transport-associated domain-containing protein ShlB-type complement(2749017..2750681) Pectobacterium wasabiae WPP163 8530924 YP_003259891.1 CDS Pecwa_2524 NC_013421.1 2751015 2751695 D PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA2115 transcriptional regulator; GntR family transcriptional regulator 2751015..2751695 Pectobacterium wasabiae WPP163 8530925 YP_003259892.1 CDS Pecwa_2525 NC_013421.1 2751832 2752044 R KEGG: pfs:PFLU3607 hypothetical protein; hypothetical protein complement(2751832..2752044) Pectobacterium wasabiae WPP163 8530926 YP_003259893.1 CDS Pecwa_2526 NC_013421.1 2752723 2754303 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: eca:ECA2091 signaling membrane protein; EAL domain-containing protein 2752723..2754303 Pectobacterium wasabiae WPP163 8530927 YP_003259894.1 CDS Pecwa_2527 NC_013421.1 2754300 2754410 R hypothetical protein complement(2754300..2754410) Pectobacterium wasabiae WPP163 8530928 YP_003259895.1 CDS Pecwa_2528 NC_013421.1 2754410 2755342 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA2075 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2754410..2755342) Pectobacterium wasabiae WPP163 8530929 YP_003259896.1 CDS Pecwa_2529 NC_013421.1 2755483 2756889 D PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: eca:ECA2074 hypothetical protein; hypothetical protein 2755483..2756889 Pectobacterium wasabiae WPP163 8530930 YP_003259897.1 CDS Pecwa_2530 NC_013421.1 2757070 2757360 R PFAM: Bor family protein; KEGG: eca:ECA2067 lipoprotein; Bor family protein complement(2757070..2757360) Pectobacterium wasabiae WPP163 8530931 YP_003259898.1 CDS Pecwa_2531 NC_013421.1 2757555 2758364 R PFAM: NLPA lipoprotein; KEGG: pct:PC1_2218 NlpA lipoprotein; NLPA lipoprotein complement(2757555..2758364) Pectobacterium wasabiae WPP163 8530932 YP_003259899.1 CDS Pecwa_2532 NC_013421.1 2758664 2759776 R PFAM: mandelate racemase/muconate lactonizing protein; KEGG: pct:PC1_2219 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(2758664..2759776) Pectobacterium wasabiae WPP163 8530933 YP_003259900.1 CDS Pecwa_2533 NC_013421.1 2759809 2760468 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2064 ABC transporter permease; binding-protein-dependent transporters inner membrane component complement(2759809..2760468) Pectobacterium wasabiae WPP163 8530934 YP_003259901.1 CDS Pecwa_2534 NC_013421.1 2760461 2761483 R PFAM: ABC transporter; NIL domain; SMART: AAA ATPase; KEGG: eca:ECA2063 ABC transporter ATP-binding protein; ABC transporter complement(2760461..2761483) Pectobacterium wasabiae WPP163 8530935 YP_003259902.1 CDS Pecwa_2535 NC_013421.1 2761881 2762543 R PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dda:Dd703_2186 haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase complement(2761881..2762543) Pectobacterium wasabiae WPP163 8530936 YP_003259903.1 CDS Pecwa_2536 NC_013421.1 2762754 2764049 D PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: eca:ECA2062 phosphatase; phosphoesterase PA-phosphatase-like protein 2762754..2764049 Pectobacterium wasabiae WPP163 8530937 YP_003259904.1 CDS Pecwa_2537 NC_013421.1 2764342 2765868 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA2061 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2764342..2765868 Pectobacterium wasabiae WPP163 8530938 YP_003259905.1 CDS Pecwa_2538 NC_013421.1 2765902 2767206 R PFAM: aminotransferase class-III; KEGG: pct:PC1_2224 aminotransferase class-III; class III aminotransferase complement(2765902..2767206) Pectobacterium wasabiae WPP163 8530939 YP_003259906.1 CDS Pecwa_2539 NC_013421.1 2767203 2768324 R PFAM: aminoglycoside phosphotransferase; KEGG: eca:ECA2059 phosphotransferase; aminoglycoside phosphotransferase complement(2767203..2768324) Pectobacterium wasabiae WPP163 8530940 YP_003259907.1 CDS Pecwa_2540 NC_013421.1 2768317 2769051 R PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: pct:PC1_2226 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2768317..2769051) Pectobacterium wasabiae WPP163 8530941 YP_003259908.1 CDS Pecwa_2541 NC_013421.1 2769592 2770410 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2057 transporter, permease protein; binding-protein-dependent transporters inner membrane component complement(2769592..2770410) Pectobacterium wasabiae WPP163 8530942 YP_003259909.1 CDS Pecwa_2542 NC_013421.1 2770448 2771716 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_2229 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(2770448..2771716) Pectobacterium wasabiae WPP163 8530943 YP_003259910.1 CDS Pecwa_2543 NC_013421.1 2771759 2772838 R PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2055 transporter, periplasmic solute-binding protein; extracellular solute-binding protein complement(2771759..2772838) Pectobacterium wasabiae WPP163 8530944 YP_003259911.1 CDS Pecwa_2544 NC_013421.1 2773204 2774676 R KEGG: eca:ECA2054 succinate-semialdehyde dehydrogenase [NADP+]; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase complement(2773204..2774676) Pectobacterium wasabiae WPP163 8530945 YP_003259912.1 CDS Pecwa_2545 NC_013421.1 2774687 2775952 R catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase complement(2774687..2775952) Pectobacterium wasabiae WPP163 8530946 YP_003259913.1 CDS Pecwa_2546 NC_013421.1 2776091 2777584 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: eca:ECA2052 GntR family transcriptional regulator; GntR family transcriptional regulator 2776091..2777584 Pectobacterium wasabiae WPP163 8530947 YP_003259914.1 CDS Pecwa_2547 NC_013421.1 2777777 2778871 D KEGG: pct:PC1_2235 spermidine/putrescine ABC transporter ATPase; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; spermidine/putrescine ABC transporter ATPase 2777777..2778871 Pectobacterium wasabiae WPP163 8530948 YP_003259915.1 CDS Pecwa_2548 NC_013421.1 2778996 2779613 D PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA2050 hypothetical protein; lysine exporter protein LysE/YggA 2778996..2779613 Pectobacterium wasabiae WPP163 8530949 YP_003259916.1 CDS Pecwa_2549 NC_013421.1 2780004 2780756 D KEGG: eca:ECA2049 hypothetical protein; hypothetical protein 2780004..2780756 Pectobacterium wasabiae WPP163 8530950 YP_003259917.1 CDS Pecwa_2550 NC_013421.1 2780870 2782834 D PFAM: hypothetical protein; KEGG: eca:ECA2048 hypothetical protein; hypothetical protein 2780870..2782834 Pectobacterium wasabiae WPP163 8530951 YP_003259918.1 CDS Pecwa_2551 NC_013421.1 2782851 2784050 D PFAM: protein of unknown function DUF1501; KEGG: eca:ECA2047 hypothetical protein; hypothetical protein 2782851..2784050 Pectobacterium wasabiae WPP163 8530952 YP_003259919.1 CDS Pecwa_2552 NC_013421.1 2784141 2787152 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; chitin synthase; KEGG: eca:ECA2046 bifunctional enzyme including aminotransferase and chitin synthase; DegT/DnrJ/EryC1/StrS aminotransferase 2784141..2787152 Pectobacterium wasabiae WPP163 8530953 YP_003259920.1 CDS Pecwa_2553 NC_013421.1 2787149 2788177 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: eca:ECA2045 NAD dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2787149..2788177 Pectobacterium wasabiae WPP163 8530954 YP_003259921.1 CDS Pecwa_2554 NC_013421.1 2788230 2788478 R PFAM: transglycosylase; KEGG: pct:PC1_2247 transglycosylase; hypothetical protein complement(2788230..2788478) Pectobacterium wasabiae WPP163 8530955 YP_003259922.1 CDS Pecwa_2555 NC_013421.1 2788659 2789279 R PFAM: YheO domain protein; KEGG: eca:ECA2041 DNA-binding protein; YheO domain-containing protein complement(2788659..2789279) Pectobacterium wasabiae WPP163 8530956 YP_003259923.1 CDS Pecwa_2556 NC_013421.1 2789550 2790524 D catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 2789550..2790524 Pectobacterium wasabiae WPP163 8530957 YP_003259924.1 CDS Pecwa_2557 NC_013421.1 2790535 2791479 D PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: eca:ECA2039 ornithine cyclodeaminase; ornithine cyclodeaminase 2790535..2791479 Pectobacterium wasabiae WPP163 8530958 YP_003259925.1 CDS Pecwa_2558 NC_013421.1 2791472 2792614 D PFAM: alanine racemase domain protein; KEGG: eca:ECA2038 hypothetical protein; alanine racemase 2791472..2792614 Pectobacterium wasabiae WPP163 8530959 YP_003259926.1 CDS Pecwa_2559 NC_013421.1 2792671 2793210 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pct:PC1_2254 MarR family transcriptional regulator; MarR family transcriptional regulator complement(2792671..2793210) Pectobacterium wasabiae WPP163 8530960 YP_003259927.1 CDS Pecwa_2560 NC_013421.1 2793273 2794145 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: pct:PC1_2255 hypothetical protein; hypothetical protein 2793273..2794145 Pectobacterium wasabiae WPP163 8530961 YP_003259928.1 CDS Pecwa_2561 NC_013421.1 2794250 2794939 R KEGG: eca:ECA2034 respiratory nitrate reductase 1 gamma chain; TIGRFAM: respiratory nitrate reductase, subunit gamma; PFAM: nitrate reductase subunit gamma; nitrate reductase subunit gamma complement(2794250..2794939) Pectobacterium wasabiae WPP163 8530962 YP_003259929.1 CDS Pecwa_2562 NC_013421.1 2794939 2795658 R KEGG: pct:PC1_2257 nitrate reductase molybdenum cofactor assembly chaperone; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: nitrate reductase subunit delta; nitrate reductase molybdenum cofactor assembly chaperone complement(2794939..2795658) Pectobacterium wasabiae WPP163 8530963 YP_003259930.1 CDS Pecwa_2563 NC_013421.1 2795651 2797231 R TIGRFAM: nitrate reductase subunit beta; KEGG: eca:ECA2032 respiratory nitrate reductase 1 beta chain; nitrate reductase subunit beta complement(2795651..2797231) Pectobacterium wasabiae WPP163 8530964 YP_003259931.1 CDS Pecwa_2564 NC_013421.1 2797231 2800992 R KEGG: eca:ECA2031 respiratory nitrate reductase 1 alpha chain; TIGRFAM: nitrate reductase subunit alpha; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; nitrate reductase subunit alpha complement(2797231..2800992) Pectobacterium wasabiae WPP163 8530965 YP_003259932.1 CDS Pecwa_2565 NC_013421.1 2801513 2801725 D hypothetical protein 2801513..2801725 Pectobacterium wasabiae WPP163 8530966 YP_003259933.1 CDS Pecwa_2566 NC_013421.1 2801764 2803152 R TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2030 nitrite extrusion protein; nitrite transporter complement(2801764..2803152) Pectobacterium wasabiae WPP163 8530967 YP_003259934.1 CDS Pecwa_2567 NC_013421.1 2803426 2805297 D KEGG: eca:ECA2029 nitrate/nitrite sensor protein NarX; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; nitrate/nitrite sensor protein NarX 2803426..2805297 Pectobacterium wasabiae WPP163 8530968 YP_003259935.1 CDS Pecwa_2568 NC_013421.1 2805290 2805940 D two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL 2805290..2805940 Pectobacterium wasabiae WPP163 8530969 YP_003259936.1 CDS Pecwa_2569 NC_013421.1 2806202 2807476 D PFAM: acyltransferase 3; KEGG: eca:ECA2027 acyltransferase; acyltransferase 3 2806202..2807476 Pectobacterium wasabiae WPP163 8530970 YP_003259937.1 CDS Pecwa_2570 NC_013421.1 2807896 2808936 D KEGG: pct:PC1_2264 hypothetical protein; hypothetical protein 2807896..2808936 Pectobacterium wasabiae WPP163 8530971 YP_003259938.1 CDS Pecwa_2571 NC_013421.1 2809011 2809697 R PFAM: cation transport protein ChaC; KEGG: eca:ECA2025 cation transporter; cation transport protein ChaC complement(2809011..2809697) Pectobacterium wasabiae WPP163 8530972 YP_003259939.1 CDS Pecwa_2572 NC_013421.1 2810003 2810167 D hypothetical protein 2810003..2810167 Pectobacterium wasabiae WPP163 8530973 YP_003259940.1 CDS Pecwa_2573 NC_013421.1 2810130 2810933 D PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: eca:ECA2023 siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain-containing protein 2810130..2810933 Pectobacterium wasabiae WPP163 8530974 YP_003259941.1 CDS Pecwa_2574 NC_013421.1 2811262 2812362 D TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; KEGG: eca:ECA2022 calcium/sodium:proton antiporter; calcium/sodium:proton antiporter 2811262..2812362 Pectobacterium wasabiae WPP163 8530975 YP_003259942.1 CDS Pecwa_2575 NC_013421.1 2812527 2814230 D role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; sulfate transporter YchM 2812527..2814230 Pectobacterium wasabiae WPP163 8530976 YP_003259943.1 CDS Pecwa_2576 NC_013421.1 2814179 2814343 R hypothetical protein complement(2814179..2814343) Pectobacterium wasabiae WPP163 8530977 YP_003259944.1 CDS Pecwa_2577 NC_013421.1 2814412 2815134 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eca:ECA2018 short chain dehydrogenase; short chain dehydrogenase 2814412..2815134 Pectobacterium wasabiae WPP163 8530978 YP_003259945.1 CDS Pecwa_2578 NC_013421.1 2815257 2816801 R PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: dda:Dd703_1789 EAL domain protein; EAL domain-containing protein complement(2815257..2816801) Pectobacterium wasabiae WPP163 8530979 YP_003259946.1 CDS Pecwa_2579 NC_013421.1 2817119 2818321 R KEGG: eca:ECA2014 hypothetical protein; hypothetical protein complement(2817119..2818321) Pectobacterium wasabiae WPP163 8530980 YP_003259947.1 CDS Pecwa_2580 NC_013421.1 2818530 2819267 D response regulator in two-component regulatory system with RstB; RstA family transcriptional regulator 2818530..2819267 Pectobacterium wasabiae WPP163 8530981 YP_003259948.1 CDS Pecwa_2581 NC_013421.1 2819264 2820577 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA2012 sensor protein RstB; sensor protein RstB 2819264..2820577 Pectobacterium wasabiae WPP163 8530982 YP_003259949.1 CDS Pecwa_2582 NC_013421.1 2820753 2821172 D required for growth and survival under moderately acid conditions; acid shock protein 2820753..2821172 Pectobacterium wasabiae WPP163 8530983 YP_003259950.1 CDS Pecwa_2584 NC_013421.1 2822018 2822872 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: eca:ECA2009 exported protease; peptidase S1 and S6 chymotrypsin/Hap 2822018..2822872 Pectobacterium wasabiae WPP163 8530985 YP_003259951.1 CDS Pecwa_2585 NC_013421.1 2822846 2822944 R hypothetical protein complement(2822846..2822944) Pectobacterium wasabiae WPP163 8530986 YP_003259952.1 CDS Pecwa_2586 NC_013421.1 2823384 2825162 D PFAM: EAL domain protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; KEGG: pct:PC1_2286 diguanylate cyclase/phosphodiesterase with GAF sensor; GAF sensor-containing diguanylate cyclase/phosphodiesterase 2823384..2825162 Pectobacterium wasabiae WPP163 8530987 YP_003259953.1 CDS Pecwa_2587 NC_013421.1 2825239 2829126 R involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA complement(2825239..2829126) Pectobacterium wasabiae WPP163 8530988 YP_003259954.1 CDS Pecwa_2588 NC_013421.1 2829086 2829259 R hypothetical protein complement(2829086..2829259) Pectobacterium wasabiae WPP163 8530989 YP_003259955.1 CDS Pecwa_2589 NC_013421.1 2829433 2830038 D FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 2829433..2830038 Pectobacterium wasabiae WPP163 8530990 YP_003259956.1 CDS Pecwa_2590 NC_013421.1 2830087 2830317 R KEGG: eca:ECA2004 lipoprotein; lipoprotein complement(2830087..2830317) Pectobacterium wasabiae WPP163 8530991 YP_003259957.1 CDS Pecwa_2591 NC_013421.1 2830333 2832924 R KEGG: eca:ECA2003 hypothetical protein; hypothetical protein complement(2830333..2832924) Pectobacterium wasabiae WPP163 8530992 YP_003259958.1 CDS Pecwa_2593 NC_013421.1 2833738 2835291 D KEGG: eca:ECA2001 aerotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 2833738..2835291 Pectobacterium wasabiae WPP163 8530994 YP_003259959.1 CDS Pecwa_2594 NC_013421.1 2835410 2836402 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: pct:PC1_2294 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2835410..2836402 Pectobacterium wasabiae WPP163 8530995 YP_003259960.1 CDS Pecwa_2595 NC_013421.1 2836585 2836875 R PFAM: protein of unknown function DUF333; KEGG: pct:PC1_2295 hypothetical protein; hypothetical protein complement(2836585..2836875) Pectobacterium wasabiae WPP163 8530996 YP_003259961.1 CDS Pecwa_2598 NC_013421.1 2838336 2839271 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2838336..2839271 Pectobacterium wasabiae WPP163 8530999 YP_003259962.1 CDS Pecwa_2599 NC_013421.1 2839321 2839605 D hypothetical protein 2839321..2839605 Pectobacterium wasabiae WPP163 8531000 YP_003259963.1 CDS zntB NC_013421.1 2839846 2840829 R PFAM: Mg2 transporter protein CorA family protein; KEGG: pct:PC1_2318 Mg2 transporter protein CorA family protein; zinc transporter complement(2839846..2840829) Pectobacterium wasabiae WPP163 8531001 YP_003259964.1 CDS Pecwa_2601 NC_013421.1 2840953 2842569 R PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1992 periplasmic murein peptide-binding protein; family 5 extracellular solute-binding protein complement(2840953..2842569) Pectobacterium wasabiae WPP163 8531002 YP_003259965.1 CDS Pecwa_2602 NC_013421.1 2842735 2843454 D PFAM: peptidase M14 carboxypeptidase A; KEGG: eca:ECA1991 murein peptide amidase A; murein peptide amidase A 2842735..2843454 Pectobacterium wasabiae WPP163 8531003 YP_003259966.1 CDS tpx NC_013421.1 2843534 2844037 D antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2843534..2844037 Pectobacterium wasabiae WPP163 8531004 YP_003259967.1 CDS Pecwa_2604 NC_013421.1 2844105 2845673 R regulates genes involved in the biosynthesis and transport of aromatic amino acids; TyrR family transcriptional regulator complement(2844105..2845673) Pectobacterium wasabiae WPP163 8531005 YP_003259968.1 CDS Pecwa_2605 NC_013421.1 2845810 2847354 R PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: eca:ECA1988 peptidase; peptidase dimerization domain-containing protein complement(2845810..2847354) Pectobacterium wasabiae WPP163 8531006 YP_003259969.1 CDS Pecwa_2606 NC_013421.1 2847512 2848555 R PFAM: conserved hypothetical protein; KEGG: eca:ECA1987 hypothetical protein; hypothetical protein complement(2847512..2848555) Pectobacterium wasabiae WPP163 8531007 YP_003259970.1 CDS Pecwa_2607 NC_013421.1 2848552 2849949 R PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: pct:PC1_2327 hypothetical protein; hypothetical protein complement(2848552..2849949) Pectobacterium wasabiae WPP163 8531008 YP_003259971.1 CDS Pecwa_2608 NC_013421.1 2850125 2850490 R with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; DNA-binding transcriptional activator PspC complement(2850125..2850490) Pectobacterium wasabiae WPP163 8531009 YP_003259972.1 CDS pspB NC_013421.1 2850490 2850714 R acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B complement(2850490..2850714) Pectobacterium wasabiae WPP163 8531010 YP_003259973.1 CDS Pecwa_2610 NC_013421.1 2850793 2851458 R involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA complement(2850793..2851458) Pectobacterium wasabiae WPP163 8531011 YP_003259974.1 CDS pspF NC_013421.1 2851684 2852670 D transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; phage shock protein operon transcriptional activator 2851684..2852670 Pectobacterium wasabiae WPP163 8531012 YP_003259975.1 CDS Pecwa_2612 NC_013421.1 2852742 2854259 R PFAM: glycoside hydrolase family 5; type 3a cellulose-binding domain protein; KEGG: eca:ECA1981 endoglucanase V; glycoside hydrolase family protein complement(2852742..2854259) Pectobacterium wasabiae WPP163 8531013 YP_003259976.1 CDS Pecwa_2613 NC_013421.1 2854807 2856495 D PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1977 peptide transport periplasmic protein; family 5 extracellular solute-binding protein 2854807..2856495 Pectobacterium wasabiae WPP163 8531014 YP_003259977.1 CDS Pecwa_2614 NC_013421.1 2856492 2857457 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_2343 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 2856492..2857457 Pectobacterium wasabiae WPP163 8531015 YP_003259978.1 CDS Pecwa_2615 NC_013421.1 2857444 2858334 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1975 peptide transporter permease protein; binding-protein-dependent transporters inner membrane component 2857444..2858334 Pectobacterium wasabiae WPP163 8531016 YP_003259979.1 CDS Pecwa_2616 NC_013421.1 2858351 2859343 D KEGG: eca:ECA1974 peptide transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; oligopeptide/dipeptide ABC transporter ATPase 2858351..2859343 Pectobacterium wasabiae WPP163 8531017 YP_003259980.1 CDS Pecwa_2617 NC_013421.1 2859343 2860158 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1973 peptide transporter ATP-binding protein; ABC transporter 2859343..2860158 Pectobacterium wasabiae WPP163 8531018 YP_003259981.1 CDS Pecwa_2618 NC_013421.1 2860351 2861139 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 2860351..2861139 Pectobacterium wasabiae WPP163 8531019 YP_003259982.1 CDS Pecwa_2619 NC_013421.1 2861329 2861958 D KEGG: csa:Csal_1206 hypothetical protein; hypothetical protein 2861329..2861958 Pectobacterium wasabiae WPP163 8531020 YP_003259983.1 CDS Pecwa_2620 NC_013421.1 2861970 2862335 R KEGG: hch:HCH_03994 hypothetical protein; hypothetical protein complement(2861970..2862335) Pectobacterium wasabiae WPP163 8531021 YP_003259984.1 CDS Pecwa_2621 NC_013421.1 2862341 2862715 R KEGG: pct:PC1_2348 hypothetical protein; hypothetical protein complement(2862341..2862715) Pectobacterium wasabiae WPP163 8531022 YP_003259985.1 CDS Pecwa_2622 NC_013421.1 2862720 2863106 R KEGG: pct:PC1_2349 hypothetical protein; hypothetical protein complement(2862720..2863106) Pectobacterium wasabiae WPP163 8531023 YP_003259986.1 CDS Pecwa_2623 NC_013421.1 2863108 2863431 R KEGG: bur:Bcep18194_B3040 hypothetical protein; hypothetical protein complement(2863108..2863431) Pectobacterium wasabiae WPP163 8531024 YP_003259987.1 CDS Pecwa_2624 NC_013421.1 2863533 2864504 R PFAM: ApbE family lipoprotein; KEGG: pct:PC1_2350 ApbE family lipoprotein; ApbE family lipoprotein complement(2863533..2864504) Pectobacterium wasabiae WPP163 8531025 YP_003259988.1 CDS Pecwa_2625 NC_013421.1 2864593 2867466 R TIGRFAM: flavocytochrome C; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FMN-binding domain protein; HI0933 family protein; NADH:flavin oxidoreductase/NADH oxidase; KEGG: eca:ECA1969 NADH:flavin oxidoreductase; flavocytochrome C complement(2864593..2867466) Pectobacterium wasabiae WPP163 8531026 YP_003259989.1 CDS Pecwa_2626 NC_013421.1 2867817 2870183 R PFAM: glycoside hydrolase family 31; KEGG: eca:ECA1968 glycosyl hydrolase; glucan 1,3-alpha-glucosidase complement(2867817..2870183) Pectobacterium wasabiae WPP163 8531027 YP_003259990.1 CDS Pecwa_2627 NC_013421.1 2870342 2871652 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1967 hexuronate transporter; major facilitator superfamily protein complement(2870342..2871652) Pectobacterium wasabiae WPP163 8531028 YP_003259991.1 CDS Pecwa_2628 NC_013421.1 2871973 2873043 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; KEGG: eca:ECA1966 transcriptional repressor; LacI family transcriptional regulator 2871973..2873043 Pectobacterium wasabiae WPP163 8531029 YP_003259992.1 CDS Pecwa_2629 NC_013421.1 2873034 2873936 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1965 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2873034..2873936) Pectobacterium wasabiae WPP163 8531030 YP_003259993.1 CDS Pecwa_2630 NC_013421.1 2874231 2876543 D TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: pct:PC1_2356 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit 2874231..2876543 Pectobacterium wasabiae WPP163 8531031 YP_003259994.1 CDS Pecwa_2631 NC_013421.1 2876781 2878715 D Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 2876781..2878715 Pectobacterium wasabiae WPP163 8531032 YP_003259995.1 CDS Pecwa_2632 NC_013421.1 2878888 2879805 D PFAM: aldo/keto reductase; KEGG: eca:ECA1962 oxidoreductase; aldo/keto reductase 2878888..2879805 Pectobacterium wasabiae WPP163 8531033 YP_003259996.1 CDS Pecwa_2633 NC_013421.1 2880250 2882313 D PFAM: carbon starvation protein CstA; KEGG: pct:PC1_2361 carbon starvation protein CstA; carbon starvation protein CstA 2880250..2882313 Pectobacterium wasabiae WPP163 8531034 YP_003259997.1 CDS Pecwa_2634 NC_013421.1 2882446 2883330 R positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; AraC family transcriptional regulator complement(2882446..2883330) Pectobacterium wasabiae WPP163 8531035 YP_003259998.1 CDS Pecwa_2635 NC_013421.1 2883363 2885372 R PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; KEGG: kpn:KPN_04612 glycoside hydrolase family protein 42; beta-galactosidase complement(2883363..2885372) Pectobacterium wasabiae WPP163 8531036 YP_003259999.1 CDS Pecwa_2636 NC_013421.1 2885390 2886622 R TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); PFAM: proton/sugar symporter LacY; major facilitator superfamily MFS_1; KEGG: kpe:KPK_5056 oligosaccharide:H+ symporter; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) complement(2885390..2886622) Pectobacterium wasabiae WPP163 8531037 YP_003260000.1 CDS araD NC_013421.1 2886920 2887615 R catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase complement(2886920..2887615) Pectobacterium wasabiae WPP163 8531038 YP_003260001.1 CDS Pecwa_2638 NC_013421.1 2887952 2888167 D KEGG: pct:PC1_2363 lipoprotein; lipoprotein 2887952..2888167 Pectobacterium wasabiae WPP163 8531039 YP_003260002.1 CDS Pecwa_2639 NC_013421.1 2888216 2888545 R involved in start site selection during the initiation of translation; translation initiation factor Sui1 complement(2888216..2888545) Pectobacterium wasabiae WPP163 8531040 YP_003260003.1 CDS Pecwa_2640 NC_013421.1 2888542 2889285 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(2888542..2889285) Pectobacterium wasabiae WPP163 8531041 YP_003260004.1 CDS Pecwa_2641 NC_013421.1 2889470 2890639 R PFAM: hypothetical protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: pct:PC1_2367 tetratricopeptide TPR_2 repeat protein; tetratricopeptide repeat protein complement(2889470..2890639) Pectobacterium wasabiae WPP163 8531042 YP_003260005.1 CDS Pecwa_2642 NC_013421.1 2890652 2890957 R PFAM: protein of unknown function DUF1049; KEGG: pct:PC1_2368 hypothetical protein; hypothetical protein complement(2890652..2890957) Pectobacterium wasabiae WPP163 8531043 YP_003260006.1 CDS Pecwa_2643 NC_013421.1 2891210 2892154 D PFAM: sugar-binding domain protein; KEGG: eca:ECA1954 transcriptional regulator; DeoR family transcriptional regulator 2891210..2892154 Pectobacterium wasabiae WPP163 8531044 YP_003260007.1 CDS Pecwa_2644 NC_013421.1 2892272 2893270 R PFAM: xylose isomerase; KEGG: eca:ECA1953 xylose isomerase; xylose isomerase complement(2892272..2893270) Pectobacterium wasabiae WPP163 8531045 YP_003260008.1 CDS Pecwa_2645 NC_013421.1 2893371 2894861 R PFAM: carbohydrate kinase, FGGY-like; KEGG: eca:ECA1952 glycerol kinase; FGGY-like carbohydrate kinase complement(2893371..2894861) Pectobacterium wasabiae WPP163 8531046 YP_003260009.1 CDS Pecwa_2646 NC_013421.1 2894864 2895808 R PFAM: transketolase; transketolase central region; KEGG: eca:ECA1951 transketolase C-terminal section; transketolase complement(2894864..2895808) Pectobacterium wasabiae WPP163 8531047 YP_003260010.1 CDS Pecwa_2647 NC_013421.1 2895801 2896631 R PFAM: transketolase; KEGG: eca:ECA1950 transketolase N-terminal section; transketolase complement(2895801..2896631) Pectobacterium wasabiae WPP163 8531048 YP_003260011.1 CDS Pecwa_2648 NC_013421.1 2896805 2897902 R PFAM: inner-membrane translocator; KEGG: eca:ECA1949 sugar ABC transporter permease; inner-membrane translocator complement(2896805..2897902) Pectobacterium wasabiae WPP163 8531049 YP_003260012.1 CDS Pecwa_2649 NC_013421.1 2897904 2899460 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1948 sugar ABC transporter ATP-binding protein; ABC transporter complement(2897904..2899460) Pectobacterium wasabiae WPP163 8531050 YP_003260013.1 CDS Pecwa_2650 NC_013421.1 2899457 2900089 R PFAM: periplasmic lipoprotein; KEGG: eca:ECA1947 lipoprotein; lipoprotein complement(2899457..2900089) Pectobacterium wasabiae WPP163 8531051 YP_003260014.1 CDS Pecwa_2651 NC_013421.1 2900134 2901075 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yps:YPTB0812 ABC transporter periplasmic sugar binding protein; periplasmic binding protein/LacI transcriptional regulator complement(2900134..2901075) Pectobacterium wasabiae WPP163 8531052 YP_003260015.1 CDS Pecwa_2652 NC_013421.1 2901322 2902098 R KEGG: pct:PC1_2370 phosphatidylglycerophosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphatidylglycerophosphatase B complement(2901322..2902098) Pectobacterium wasabiae WPP163 8531053 YP_003260016.1 CDS ribA NC_013421.1 2902372 2902965 D catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 2902372..2902965 Pectobacterium wasabiae WPP163 8531054 YP_003260017.1 CDS Pecwa_2654 NC_013421.1 2903035 2904669 R PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1942 periplasmic oligopeptide-binding protein; family 5 extracellular solute-binding protein complement(2903035..2904669) Pectobacterium wasabiae WPP163 8531055 YP_003260018.1 CDS Pecwa_2655 NC_013421.1 2904815 2905381 D KEGG: ses:SARI_02726 hypothetical protein; hypothetical protein 2904815..2905381 Pectobacterium wasabiae WPP163 8531056 YP_003260019.1 CDS Pecwa_2656 NC_013421.1 2905469 2908141 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(2905469..2908141) Pectobacterium wasabiae WPP163 8531057 YP_003260020.1 CDS Pecwa_2657 NC_013421.1 2908552 2909835 R PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA1939 glutamate symport protein; sodium:dicarboxylate symporter complement(2908552..2909835) Pectobacterium wasabiae WPP163 8531058 YP_003260021.1 CDS Pecwa_2658 NC_013421.1 2909992 2910096 R hypothetical protein complement(2909992..2910096) Pectobacterium wasabiae WPP163 8531059 YP_003260022.1 CDS Pecwa_2659 NC_013421.1 2910707 2911315 D PFAM: glutathione S-transferase domain; KEGG: pct:PC1_2375 glutathione S-transferase; glutathione transferase 2910707..2911315 Pectobacterium wasabiae WPP163 8531060 YP_003260023.1 CDS Pecwa_2660 NC_013421.1 2911378 2912238 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase complement(2911378..2912238) Pectobacterium wasabiae WPP163 8531061 YP_003260024.1 CDS Pecwa_2661 NC_013421.1 2912323 2913600 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(2912323..2913600) Pectobacterium wasabiae WPP163 8531062 YP_003260025.1 CDS Pecwa_2662 NC_013421.1 2913835 2914518 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase complement(2913835..2914518) Pectobacterium wasabiae WPP163 8531063 YP_003260026.1 CDS Pecwa_2663 NC_013421.1 2914626 2914943 R PFAM: protein of unknown function DUF2091, periplasmic; KEGG: pct:PC1_2379 lipoprotein; hypothetical protein complement(2914626..2914943) Pectobacterium wasabiae WPP163 8531064 YP_003260027.1 CDS anmK NC_013421.1 2915040 2916152 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(2915040..2916152) Pectobacterium wasabiae WPP163 8531065 YP_003260028.1 CDS Pecwa_2665 NC_013421.1 2916503 2916970 D PFAM: 17 kDa surface antigen; KEGG: eca:ECA1932 outer membrane lipoprotein; 17 kDa surface antigen 2916503..2916970 Pectobacterium wasabiae WPP163 8531066 YP_003260029.1 CDS Pecwa_2666 NC_013421.1 2917102 2917539 R transcription regulator that can both activate or repress expression; transcriptional regulator SlyA complement(2917102..2917539) Pectobacterium wasabiae WPP163 8531067 YP_003260030.1 CDS Pecwa_2667 NC_013421.1 2917770 2918009 R PFAM: protein of unknown function DUF1289; KEGG: pct:PC1_2383 hypothetical protein; hypothetical protein complement(2917770..2918009) Pectobacterium wasabiae WPP163 8531068 YP_003260031.1 CDS Pecwa_2668 NC_013421.1 2918299 2918706 D KEGG: eca:ECA1929 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 2918299..2918706 Pectobacterium wasabiae WPP163 8531069 YP_003260032.1 CDS Pecwa_2669 NC_013421.1 2918866 2919537 D Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2918866..2919537 Pectobacterium wasabiae WPP163 8531070 YP_003260033.1 CDS Pecwa_2670 NC_013421.1 2919651 2920001 R TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: eca:ECA1927 hypothetical protein; hypothetical protein complement(2919651..2920001) Pectobacterium wasabiae WPP163 8531071 YP_003260034.1 CDS Pecwa_2671 NC_013421.1 2920343 2921194 D PFAM: NLP/P60 protein; KEGG: eca:ECA1926 hypothetical protein; NLP/P60 protein 2920343..2921194 Pectobacterium wasabiae WPP163 8531072 YP_003260035.1 CDS Pecwa_2672 NC_013421.1 2921766 2922791 D binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; PurR family transcriptional regulator 2921766..2922791 Pectobacterium wasabiae WPP163 8531073 YP_003260036.1 CDS Pecwa_2673 NC_013421.1 2923109 2924263 D catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 2923109..2924263 Pectobacterium wasabiae WPP163 8531074 YP_003260037.1 CDS Pecwa_2674 NC_013421.1 2924323 2924958 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(2924323..2924958) Pectobacterium wasabiae WPP163 8531075 YP_003260038.1 CDS Pecwa_2675 NC_013421.1 2925207 2926580 D NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 2925207..2926580 Pectobacterium wasabiae WPP163 8531076 YP_003260039.1 CDS Pecwa_2676 NC_013421.1 2927441 2928994 D TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: eca:ECA1921 L-lactate permease; L-lactate transport 2927441..2928994 Pectobacterium wasabiae WPP163 8531078 YP_003260040.1 CDS Pecwa_2677 NC_013421.1 2929041 2929760 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: eca:ECA1920 hypothetical protein; hypothetical protein 2929041..2929760 Pectobacterium wasabiae WPP163 8531079 YP_003260041.1 CDS Pecwa_2678 NC_013421.1 2929770 2931191 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: eca:ECA1919 electron transporter; iron-sulfur cluster binding protein 2929770..2931191 Pectobacterium wasabiae WPP163 8531080 YP_003260042.1 CDS Pecwa_2679 NC_013421.1 2931191 2931886 D PFAM: protein of unknown function DUF162; KEGG: eca:ECA1918 hypothetical protein; hypothetical protein 2931191..2931886 Pectobacterium wasabiae WPP163 8531081 YP_003260043.1 CDS Pecwa_2680 NC_013421.1 2931939 2935541 R KEGG: eca:ECA1917 allophanate hydrolase; TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; SMART: allophanate hydrolase subunit 2; allophanate hydrolase subunit 1; urea carboxylase complement(2931939..2935541) Pectobacterium wasabiae WPP163 8531082 YP_003260044.1 CDS Pecwa_2681 NC_013421.1 2935653 2935793 R KEGG: pct:PC1_2394 hypothetical protein; hypothetical protein complement(2935653..2935793) Pectobacterium wasabiae WPP163 8531083 YP_003260045.1 CDS Pecwa_2682 NC_013421.1 2935784 2936419 R TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; KEGG: eca:ECA1916 hypothetical protein; urea carboxylase-associated protein 1 complement(2935784..2936419) Pectobacterium wasabiae WPP163 8531084 YP_003260046.1 CDS Pecwa_2683 NC_013421.1 2936431 2937177 R TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; KEGG: pct:PC1_2396 UreA carboxylase-associated protein 2; urea carboxylase-associated protein 2 complement(2936431..2937177) Pectobacterium wasabiae WPP163 8531085 YP_003260047.1 CDS Pecwa_2684 NC_013421.1 2937191 2937982 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1914 ABC transporter ATP-binding protein; ABC transporter complement(2937191..2937982) Pectobacterium wasabiae WPP163 8531086 YP_003260048.1 CDS Pecwa_2685 NC_013421.1 2937979 2938794 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1913 ABC transporter permease; binding-protein-dependent transporters inner membrane component complement(2937979..2938794) Pectobacterium wasabiae WPP163 8531087 YP_003260049.1 CDS Pecwa_2686 NC_013421.1 2938818 2939876 R TIGRFAM: ABC transporter periplasmic protein, urea carboxylase region; KEGG: eca:ECA1912 ABC transporter periplasmic protein; ABC transporter periplasmic protein complement(2938818..2939876) Pectobacterium wasabiae WPP163 8531088 YP_003260050.1 CDS Pecwa_2687 NC_013421.1 2940220 2940633 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: eca:ECA1911 MarR family transcriptional regulator; MarR family transcriptional regulator complement(2940220..2940633) Pectobacterium wasabiae WPP163 8531089 YP_003260051.1 CDS Pecwa_2688 NC_013421.1 2940715 2940978 D KEGG: eca:ECA1910 hypothetical protein; hypothetical protein 2940715..2940978 Pectobacterium wasabiae WPP163 8531090 YP_003260052.1 CDS Pecwa_2689 NC_013421.1 2941065 2943239 R TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: eca:ECA1909 catalase-peroxidase; catalase/peroxidase HPI complement(2941065..2943239) Pectobacterium wasabiae WPP163 8531091 YP_003260053.1 CDS Pecwa_2691 NC_013421.1 2944247 2945095 D PFAM: protein of unknown function DUF1528; transposase IS3/IS911 family protein; KEGG: dze:Dd1591_0425 relaxase; hypothetical protein 2944247..2945095 Pectobacterium wasabiae WPP163 8531094 YP_003260054.1 CDS Pecwa_2692 NC_013421.1 2945154 2946752 R PFAM: sigma-54 factor interaction domain-containing protein; SMART: ATPase AAA; KEGG: dze:Dd1591_0424 sigma 54 interacting domain protein; sigma-54 specific transcriptional regulator complement(2945154..2946752) Pectobacterium wasabiae WPP163 8531095 YP_003260055.1 CDS Pecwa_2693 NC_013421.1 2947588 2948007 R KEGG: spc:Sputcn32_2884 hypothetical protein; hypothetical protein complement(2947588..2948007) Pectobacterium wasabiae WPP163 8531096 YP_003260056.1 CDS Pecwa_2694 NC_013421.1 2948018 2952304 R TIGRFAM: hypothetical protein; PFAM: PAAR repeat-containing protein; hypothetical protein; KEGG: eca:ECA2869 rhs protein; hypothetical protein complement(2948018..2952304) Pectobacterium wasabiae WPP163 8531097 YP_003260057.1 CDS Pecwa_2695 NC_013421.1 2952297 2952743 R PFAM: Domain of unknown function DUF1795; KEGG: eca:ECA4277 hypothetical protein; hypothetical protein complement(2952297..2952743) Pectobacterium wasabiae WPP163 8531098 YP_003260058.1 CDS Pecwa_2696 NC_013421.1 2952775 2954622 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 rhs accessory genetic element; ImpA family type VI secretion-associated protein complement(2952775..2954622) Pectobacterium wasabiae WPP163 8531099 YP_003260059.1 CDS Pecwa_2697 NC_013421.1 2954716 2955234 R TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: pct:PC1_0054 type VI secretion system effector, Hcp1 family; type VI secretion system effector complement(2954716..2955234) Pectobacterium wasabiae WPP163 8531100 YP_003260060.1 CDS Pecwa_2698 NC_013421.1 2955840 2956001 D KEGG: hde:HDEF_1764 transcriptional activator of maltose metabolism; transcriptional regulator, Nlp 2955840..2956001 Pectobacterium wasabiae WPP163 8531101 YP_003260061.1 CDS Pecwa_2699 NC_013421.1 2956168 2956371 R KEGG: net:Neut_0006 phage integrase; phage integrase complement(2956168..2956371) Pectobacterium wasabiae WPP163 8531102 YP_003260062.1 CDS Pecwa_2700 NC_013421.1 2957075 2958001 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: eca:ECA3947 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(2957075..2958001) Pectobacterium wasabiae WPP163 8531104 YP_003260063.1 CDS Pecwa_2701 NC_013421.1 2958072 2959778 R KEGG: pct:PC1_3739 hypothetical protein; hypothetical protein complement(2958072..2959778) Pectobacterium wasabiae WPP163 8531105 YP_003260064.1 CDS Pecwa_2702 NC_013421.1 2959843 2961903 R PFAM: protein of unknown function DUF2207, membrane; KEGG: pct:PC1_3740 hypothetical protein; hypothetical protein complement(2959843..2961903) Pectobacterium wasabiae WPP163 8531106 YP_003260065.1 CDS Pecwa_2703 NC_013421.1 2961908 2962450 R PFAM: LemA family protein; KEGG: pct:PC1_3741 LemA family protein; LemA family protein complement(2961908..2962450) Pectobacterium wasabiae WPP163 8531107 YP_003260066.1 CDS Pecwa_2704 NC_013421.1 2962825 2963991 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: pct:PC1_3745 major facilitator superfamily MFS_1; major facilitator superfamily protein 2962825..2963991 Pectobacterium wasabiae WPP163 8531108 YP_003260067.1 CDS Pecwa_2705 NC_013421.1 2964062 2965204 D KEGG: pct:PC1_3749 hypothetical protein; hypothetical protein 2964062..2965204 Pectobacterium wasabiae WPP163 8531109 YP_003260068.1 CDS Pecwa_2706 NC_013421.1 2965304 2966125 D KEGG: sea:SeAg_B2063 hypothetical protein; hypothetical protein 2965304..2966125 Pectobacterium wasabiae WPP163 8531110 YP_003260069.1 CDS Pecwa_2708 NC_013421.1 2966645 2967169 R KEGG: shw:Sputw3181_3748 hypothetical protein; hypothetical protein complement(2966645..2967169) Pectobacterium wasabiae WPP163 8531112 YP_003260070.1 CDS Pecwa_2709 NC_013421.1 2967290 2967679 R KEGG: spc:Sputcn32_1424 hypothetical protein; hypothetical protein complement(2967290..2967679) Pectobacterium wasabiae WPP163 8531113 YP_003260071.1 CDS Pecwa_2710 NC_013421.1 2968046 2968333 R KEGG: hch:HCH_03872 hypothetical protein; hypothetical protein complement(2968046..2968333) Pectobacterium wasabiae WPP163 8531114 YP_003260072.1 CDS Pecwa_2711 NC_013421.1 2968491 2969123 R nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; transcriptional regulator NarP complement(2968491..2969123) Pectobacterium wasabiae WPP163 8531115 YP_003260073.1 CDS Pecwa_2712 NC_013421.1 2969210 2970928 R KEGG: eca:ECA1900 nitrate/nitrite sensor protein NarQ; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; nitrate/nitrite sensor protein NarQ complement(2969210..2970928) Pectobacterium wasabiae WPP163 8531116 YP_003260074.1 CDS Pecwa_2713 NC_013421.1 2971419 2971955 D TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA1898 ferredoxin-type protein; ferredoxin-type protein NapF 2971419..2971955 Pectobacterium wasabiae WPP163 8531117 YP_003260075.1 CDS Pecwa_2714 NC_013421.1 2971952 2972272 D PFAM: NapD family protein; KEGG: pct:PC1_2410 NapD family protein; assembly protein for periplasmic nitrate reductase 2971952..2972272 Pectobacterium wasabiae WPP163 8531118 YP_003260076.1 CDS Pecwa_2715 NC_013421.1 2972269 2974755 D periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 2972269..2974755 Pectobacterium wasabiae WPP163 8531119 YP_003260077.1 CDS napG NC_013421.1 2974761 2975453 D part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic protein 2974761..2975453 Pectobacterium wasabiae WPP163 8531120 YP_003260078.1 CDS napH NC_013421.1 2975440 2976303 D part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 2975440..2976303 Pectobacterium wasabiae WPP163 8531121 YP_003260079.1 CDS napB NC_013421.1 2976300 2976737 D small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; citrate reductase cytochrome C subunit 2976300..2976737 Pectobacterium wasabiae WPP163 8531122 YP_003260080.1 CDS Pecwa_2719 NC_013421.1 2976746 2977348 D with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; cytochrome C protein NapC 2976746..2977348 Pectobacterium wasabiae WPP163 8531123 YP_003260081.1 CDS Pecwa_2720 NC_013421.1 2977725 2978594 R KEGG: eca:ECA1890 cytochrome C biogenesis protein; TIGRFAM: cytochrome C biogenesis protein CcmI; PFAM: hypothetical protein; hypothetical protein; SMART: Tetratricopeptide repeat; cytochrome C biogenesis protein CcmI complement(2977725..2978594) Pectobacterium wasabiae WPP163 8531124 YP_003260082.1 CDS Pecwa_2721 NC_013421.1 2978591 2979049 R PFAM: cytochrome C biogenesis protein; KEGG: eca:ECA1889 cytochrome C biogenesis protein; cytochrome C biogenesis protein complement(2978591..2979049) Pectobacterium wasabiae WPP163 8531125 YP_003260083.1 CDS Pecwa_2722 NC_013421.1 2979046 2979603 R TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: pct:PC1_2418 periplasmic protein thiol/disulphide oxidoreductase DsbE; periplasmic protein thiol/disulfide oxidoreductase DsbE complement(2979046..2979603) Pectobacterium wasabiae WPP163 8531126 YP_003260084.1 CDS Pecwa_2723 NC_013421.1 2979600 2981555 R TIGRFAM: cytochrome C biogenesis protein CcmF; PFAM: cytochrome C assembly protein; KEGG: eca:ECA1887 cytochrome C biogenesis protein; cytochrome C biogenesis protein CcmF complement(2979600..2981555) Pectobacterium wasabiae WPP163 8531127 YP_003260085.1 CDS Pecwa_2724 NC_013421.1 2981552 2982034 R CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome C maturation system; periplasmic protein anchored to the inner membrane; cytochrome C biogenesis protein CcmE complement(2981552..2982034) Pectobacterium wasabiae WPP163 8531128 YP_003260086.1 CDS Pecwa_2725 NC_013421.1 2982031 2982252 R TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); KEGG: pct:PC1_2421 heme exporter protein CcmD; heme exporter protein CcmD complement(2982031..2982252) Pectobacterium wasabiae WPP163 8531129 YP_003260087.1 CDS Pecwa_2726 NC_013421.1 2982249 2982989 R TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome C assembly protein; KEGG: pct:PC1_2422 heme exporter protein CcmC; heme exporter protein CcmC complement(2982249..2982989) Pectobacterium wasabiae WPP163 8531130 YP_003260088.1 CDS Pecwa_2727 NC_013421.1 2983058 2983714 R TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: eca:ECA1883 heme exporter protein B; heme exporter protein CcmB complement(2983058..2983714) Pectobacterium wasabiae WPP163 8531131 YP_003260089.1 CDS Pecwa_2728 NC_013421.1 2983714 2984334 R ATP-binding protein; required for proper cytochrome C maturation; cytochrome C biogenesis protein CcmA complement(2983714..2984334) Pectobacterium wasabiae WPP163 8531132 YP_003260090.1 CDS Pecwa_2729 NC_013421.1 2984536 2985363 R KEGG: eca:ECA1881 formate-dependent nitrite reductase complex subunit NrfG; formate-dependent nitrite reductase complex subunit NrfG complement(2984536..2985363) Pectobacterium wasabiae WPP163 8531133 YP_003260091.1 CDS Pecwa_2730 NC_013421.1 2985360 2985761 R TIGRFAM: cytochrome C nitrite reductase, accessory protein NrfF; PFAM: cytochrome C biogenesis protein; KEGG: eca:ECA1880 formate-dependent nitrite reductase complex subunit NrfF; formate-dependent nitrite reductase complex subunit NrfF complement(2985360..2985761) Pectobacterium wasabiae WPP163 8531134 YP_003260092.1 CDS Pecwa_2731 NC_013421.1 2985754 2987628 R with NrfF and NrfG catalyzes the insertion of heme into cytochrome C552; heme lyase subunit NrfE complement(2985754..2987628) Pectobacterium wasabiae WPP163 8531135 YP_003260093.1 CDS Pecwa_2732 NC_013421.1 2987650 2988612 R TIGRFAM: cytochrome C nitrite reductase, NrfD subunit; PFAM: polysulphide reductase NrfD; KEGG: eca:ECA1878 nitrite reductase complex component; cytochrome C nitrite reductase, NrfD subunit complement(2987650..2988612) Pectobacterium wasabiae WPP163 8531136 YP_003260094.1 CDS Pecwa_2733 NC_013421.1 2988609 2989280 R TIGRFAM: cytochrome C nitrite reductase, Fe-S protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pct:PC1_2430 cytochrome C nitrite reductase, Fe-S protein; cytochrome C nitrite reductase, Fe-S protein complement(2988609..2989280) Pectobacterium wasabiae WPP163 8531137 YP_003260095.1 CDS Pecwa_2734 NC_013421.1 2989277 2989846 R part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia; cytochrome C nitrite reductase pentaheme subunit complement(2989277..2989846) Pectobacterium wasabiae WPP163 8531138 YP_003260096.1 CDS nrfA NC_013421.1 2989893 2991311 R catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome C552 complement(2989893..2991311) Pectobacterium wasabiae WPP163 8531139 YP_003260097.1 CDS Pecwa_2736 NC_013421.1 2991815 2992111 D hypothetical protein 2991815..2992111 Pectobacterium wasabiae WPP163 8531140 YP_003260098.1 CDS Pecwa_2737 NC_013421.1 2992267 2993280 R PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: eca:ECA1874 inosine-uridine preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase complement(2992267..2993280) Pectobacterium wasabiae WPP163 8531141 YP_003260099.1 CDS Pecwa_2738 NC_013421.1 2993387 2994571 R PFAM: glycoside hydrolase family 13 domain protein; esterase; KEGG: eca:ECA1873 glycosyl hydrolase exoenzyme; glycoside hydrolase family 13 complement(2993387..2994571) Pectobacterium wasabiae WPP163 8531142 YP_003260100.1 CDS Pecwa_2739 NC_013421.1 2994665 2996296 R KEGG: pat:Patl_0833 hypothetical protein; hypothetical protein complement(2994665..2996296) Pectobacterium wasabiae WPP163 8531143 YP_003260101.1 CDS Pecwa_2740 NC_013421.1 2996361 2997917 R PFAM: porin; KEGG: dze:Dd1591_1706 porin; porin complement(2996361..2997917) Pectobacterium wasabiae WPP163 8531144 YP_003260102.1 CDS Pecwa_2741 NC_013421.1 2997949 2999349 R PFAM: glycoside hydrolase family 1; KEGG: eca:ECA1871 6-phospho-beta-glucosidase; glycoside hydrolase family 1 complement(2997949..2999349) Pectobacterium wasabiae WPP163 8531145 YP_003260103.1 CDS Pecwa_2742 NC_013421.1 2999385 3001286 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system beta-glucoside-specific transporter subunit IIABC complement(2999385..3001286) Pectobacterium wasabiae WPP163 8531146 YP_003260104.1 CDS Pecwa_2743 NC_013421.1 3001725 3002588 R PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: pct:PC1_2440 transcriptional antiterminator, BglG; transcriptional antiterminator BglG complement(3001725..3002588) Pectobacterium wasabiae WPP163 8531147 YP_003260105.1 CDS Pecwa_2744 NC_013421.1 3003154 3004629 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 3003154..3004629 Pectobacterium wasabiae WPP163 8531148 YP_003260106.1 CDS Pecwa_2745 NC_013421.1 3004944 3005180 D PFAM: LPP repeat-containing protein; KEGG: pct:PC1_2442 LPP repeat-containing protein; LPP repeat-containing protein 3004944..3005180 Pectobacterium wasabiae WPP163 8531149 YP_003260107.1 CDS Pecwa_2746 NC_013421.1 3005361 3006383 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eca:ECA1865 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(3005361..3006383) Pectobacterium wasabiae WPP163 8531150 YP_003260108.1 CDS Pecwa_2747 NC_013421.1 3006764 3007180 R Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE complement(3006764..3007180) Pectobacterium wasabiae WPP163 8531151 YP_003260109.1 CDS Pecwa_2748 NC_013421.1 3007214 3008437 R catalyzes the formation of L-alanine and selenide or sulfanylcysteine from selenocysteine or cysteine; bifunctional cysteine desulfurase/selenocysteine lyase complement(3007214..3008437) Pectobacterium wasabiae WPP163 8531152 YP_003260110.1 CDS Pecwa_2749 NC_013421.1 3008437 3009783 R with SufBC activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufD complement(3008437..3009783) Pectobacterium wasabiae WPP163 8531153 YP_003260111.1 CDS sufC NC_013421.1 3009758 3010504 R part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase complement(3009758..3010504) Pectobacterium wasabiae WPP163 8531154 YP_003260112.1 CDS Pecwa_2751 NC_013421.1 3010602 3012101 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(3010602..3012101) Pectobacterium wasabiae WPP163 8531155 YP_003260113.1 CDS sufA NC_013421.1 3012115 3012486 R functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; iron-sulfur cluster assembly scaffold protein complement(3012115..3012486) Pectobacterium wasabiae WPP163 8531156 YP_003260114.1 CDS Pecwa_2753 NC_013421.1 3012913 3013314 D KEGG: pct:PC1_2451 hypothetical protein; hypothetical protein 3012913..3013314 Pectobacterium wasabiae WPP163 8531157 YP_003260115.1 CDS Pecwa_2754 NC_013421.1 3013378 3013794 R PFAM: thioesterase superfamily protein; KEGG: eca:ECA1857 hypothetical protein; thioesterase superfamily protein complement(3013378..3013794) Pectobacterium wasabiae WPP163 8531158 YP_003260116.1 CDS Pecwa_2755 NC_013421.1 3013794 3016847 R PFAM: FAD linked oxidase; KEGG: eca:ECA1856 FAD-binding oxidase; FAD linked oxidase complement(3013794..3016847) Pectobacterium wasabiae WPP163 8531159 YP_003260117.1 CDS Pecwa_2756 NC_013421.1 3017265 3018374 D YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; inner membrane protein 3017265..3018374 Pectobacterium wasabiae WPP163 8531160 YP_003260118.1 CDS Pecwa_2757 NC_013421.1 3018861 3019907 D catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; thiamine biosynthesis lipoprotein ApbE 3018861..3019907 Pectobacterium wasabiae WPP163 8531161 YP_003260119.1 CDS Pecwa_2758 NC_013421.1 3020078 3022456 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(3020078..3022456) Pectobacterium wasabiae WPP163 8531162 YP_003260120.1 CDS Pecwa_2759 NC_013421.1 3022757 3023578 D PFAM: protein of unknown function DUF299; KEGG: eca:ECA1852 hypothetical protein; hypothetical protein 3022757..3023578 Pectobacterium wasabiae WPP163 8531163 YP_003260121.1 CDS Pecwa_2760 NC_013421.1 3023772 3024818 D tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 3023772..3024818 Pectobacterium wasabiae WPP163 8531164 YP_003260122.1 CDS Pecwa_2761 NC_013421.1 3025028 3026077 D PFAM: Haemin-degrading family protein; KEGG: pct:PC1_2459 hemin-degrading family protein; hemin-degrading family protein 3025028..3026077 Pectobacterium wasabiae WPP163 8531165 YP_003260123.1 CDS Pecwa_2762 NC_013421.1 3026074 3026892 D PFAM: periplasmic binding protein; KEGG: eca:ECA1845 hemin-binding periplasmic protein; periplasmic binding protein 3026074..3026892 Pectobacterium wasabiae WPP163 8531166 YP_003260124.1 CDS Pecwa_2763 NC_013421.1 3026889 3027893 D PFAM: transporter permease; KEGG: eca:ECA1844 hemin transporter permease; transporter permease 3026889..3027893 Pectobacterium wasabiae WPP163 8531167 YP_003260125.1 CDS hmuV NC_013421.1 3027886 3028683 D with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 3027886..3028683 Pectobacterium wasabiae WPP163 8531168 YP_003260126.1 CDS Pecwa_2765 NC_013421.1 3028704 3030155 R PFAM: protein of unknown function UPF0061; KEGG: eca:ECA1842 hypothetical protein; hypothetical protein complement(3028704..3030155) Pectobacterium wasabiae WPP163 8531169 YP_003260127.1 CDS Pecwa_2766 NC_013421.1 3030327 3031052 R PFAM: EAL domain protein; KEGG: eca:ECA1841 hypothetical protein; diguanylate phosphodiesterase complement(3030327..3031052) Pectobacterium wasabiae WPP163 8531170 YP_003260128.1 CDS Pecwa_2768 NC_013421.1 3031438 3032772 R TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: eca:ECA1840 high-affinity gluconate transporter; gluconate transporter complement(3031438..3032772) Pectobacterium wasabiae WPP163 8531172 YP_003260129.1 CDS Pecwa_2769 NC_013421.1 3033069 3033596 D KEGG: eca:ECA1839 gluconokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 3033069..3033596 Pectobacterium wasabiae WPP163 8531173 YP_003260130.1 CDS Pecwa_2770 NC_013421.1 3033601 3034596 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: eca:ECA1838 gluconate utilization system Gnt-I transcriptional repressor; LacI family transcriptional regulator complement(3033601..3034596) Pectobacterium wasabiae WPP163 8531174 YP_003260131.1 CDS Pecwa_2771 NC_013421.1 3035613 3037448 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 3035613..3037448 Pectobacterium wasabiae WPP163 8531175 YP_003260132.1 CDS Pecwa_2772 NC_013421.1 3037514 3037987 R PFAM: NLP/P60 protein; KEGG: eca:ECA1835 lipoprotein; NLP/P60 protein complement(3037514..3037987) Pectobacterium wasabiae WPP163 8531176 YP_003260133.1 CDS Pecwa_2773 NC_013421.1 3038176 3038904 R ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; vitamin B12-transporter ATPase complement(3038176..3038904) Pectobacterium wasabiae WPP163 8531177 YP_003260134.1 CDS btuE NC_013421.1 3038953 3039504 R similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; glutathione peroxidase complement(3038953..3039504) Pectobacterium wasabiae WPP163 8531178 YP_003260135.1 CDS Pecwa_2775 NC_013421.1 3039571 3040608 R with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease complement(3039571..3040608) Pectobacterium wasabiae WPP163 8531179 YP_003260136.1 CDS Pecwa_2776 NC_013421.1 3040781 3041545 R PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: eca:ECA1831 methyltransferase; methyltransferase type 11 complement(3040781..3041545) Pectobacterium wasabiae WPP163 8531180 YP_003260137.1 CDS Pecwa_2777 NC_013421.1 3041584 3041925 R PFAM: cupin; KEGG: eca:ECA1830 hypothetical protein; cupin complement(3041584..3041925) Pectobacterium wasabiae WPP163 8531181 YP_003260138.1 CDS Pecwa_2778 NC_013421.1 3042042 3042758 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: eca:ECA1829 Crp/Fnr family transcriptional regulator; Crp/Fnr family transcriptional regulator 3042042..3042758 Pectobacterium wasabiae WPP163 8531182 YP_003260139.1 CDS Pecwa_2779 NC_013421.1 3042825 3042965 R KEGG: eca:ECA3326 hypothetical protein; hypothetical protein complement(3042825..3042965) Pectobacterium wasabiae WPP163 8531183 YP_003260140.1 CDS Pecwa_2780 NC_013421.1 3043082 3043315 D KEGG: eca:ECA1828 hypothetical protein; hypothetical protein 3043082..3043315 Pectobacterium wasabiae WPP163 8531184 YP_003260141.1 CDS Pecwa_2781 NC_013421.1 3043338 3044168 R Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase complement(3043338..3044168) Pectobacterium wasabiae WPP163 8531185 YP_003260142.1 CDS Pecwa_2782 NC_013421.1 3044180 3045091 R PFAM: ROK family protein; KEGG: eca:ECA1826 hypothetical protein; ROK family protein complement(3044180..3045091) Pectobacterium wasabiae WPP163 8531186 YP_003260143.1 CDS Pecwa_2783 NC_013421.1 3045176 3046423 R part of the ATP-dependent transporter LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE complement(3045176..3046423) Pectobacterium wasabiae WPP163 8531187 YP_003260144.1 CDS lolD NC_013421.1 3046420 3047127 R outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; lipoprotein transporter ATP-binding subunit complement(3046420..3047127) Pectobacterium wasabiae WPP163 8531188 YP_003260145.1 CDS Pecwa_2785 NC_013421.1 3047120 3048322 R part of the ATP-dependent transporter LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC complement(3047120..3048322) Pectobacterium wasabiae WPP163 8531189 YP_003260146.1 CDS Pecwa_2786 NC_013421.1 3048459 3051911 D KEGG: eca:ECA1821 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein; transcription factor CarD; helicase; DEAD/DEAH box helicase; type III restriction protein res subunit; SMART: DEAD/DEAH box helicase ; helicase; transcription-repair coupling factor 3048459..3051911 Pectobacterium wasabiae WPP163 8531190 YP_003260147.1 CDS Pecwa_2787 NC_013421.1 3052172 3053542 D KEGG: eca:ECA1820 chaperone; chaperone 3052172..3053542 Pectobacterium wasabiae WPP163 8531191 YP_003260148.1 CDS Pecwa_2788 NC_013421.1 3053579 3054184 R PFAM: regulatory protein TetR; KEGG: eca:ECA1819 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3053579..3054184) Pectobacterium wasabiae WPP163 8531192 YP_003260149.1 CDS Pecwa_2789 NC_013421.1 3054320 3055528 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1818 transporter; major facilitator superfamily protein 3054320..3055528 Pectobacterium wasabiae WPP163 8531193 YP_003260150.1 CDS Pecwa_2790 NC_013421.1 3055566 3056762 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1817 transporter; major facilitator superfamily protein 3055566..3056762 Pectobacterium wasabiae WPP163 8531194 YP_003260151.1 CDS Pecwa_2791 NC_013421.1 3056844 3057383 R PFAM: 17 kDa surface antigen; KEGG: eca:ECA1816 hypothetical protein; hypothetical protein complement(3056844..3057383) Pectobacterium wasabiae WPP163 8531195 YP_003260152.1 CDS Pecwa_2792 NC_013421.1 3057851 3059155 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pct:PC1_2486 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3057851..3059155) Pectobacterium wasabiae WPP163 8531196 YP_003260153.1 CDS Pecwa_2793 NC_013421.1 3059520 3060062 R PFAM: protein of unknown function UPF0227; KEGG: eca:ECA1814 hypothetical protein; hypothetical protein complement(3059520..3060062) Pectobacterium wasabiae WPP163 8531197 YP_003260154.1 CDS Pecwa_2794 NC_013421.1 3060091 3061119 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(3060091..3061119) Pectobacterium wasabiae WPP163 8531198 YP_003260155.1 CDS Pecwa_2795 NC_013421.1 3061173 3062066 R KEGG: pct:PC1_2489 thiamine kinase; TIGRFAM: thiamine kinase; PFAM: aminoglycoside phosphotransferase; thiamine kinase complement(3061173..3062066) Pectobacterium wasabiae WPP163 8531199 YP_003260156.1 CDS Pecwa_2796 NC_013421.1 3062047 3062628 R TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: pct:PC1_2490 membrane lipoprotein lipid attachment site; membrane lipoprotein lipid attachment site complement(3062047..3062628) Pectobacterium wasabiae WPP163 8531200 YP_003260157.1 CDS Pecwa_2797 NC_013421.1 3062650 3063030 R PFAM: protein of unknown function DUF1425; KEGG: eca:ECA1810 lipoprotein; hypothetical protein complement(3062650..3063030) Pectobacterium wasabiae WPP163 8531201 YP_003260158.1 CDS Pecwa_2798 NC_013421.1 3063071 3063421 R PFAM: histidine triad (HIT) protein; KEGG: eca:ECA1809 purine nucleoside phosphoramidase; purine nucleoside phosphoramidase complement(3063071..3063421) Pectobacterium wasabiae WPP163 8531202 YP_003260159.1 CDS Pecwa_2799 NC_013421.1 3063645 3065078 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunit IIBC complement(3063645..3065078) Pectobacterium wasabiae WPP163 8531203 YP_003260160.1 CDS Pecwa_2800 NC_013421.1 3065398 3066192 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: eca:ECA1804 metallodependent hydrolase; metallodependent hydrolase complement(3065398..3066192) Pectobacterium wasabiae WPP163 8531204 YP_003260161.1 CDS Pecwa_2801 NC_013421.1 3066216 3067226 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the subunit beta on the DNA; DNA polymerase III subunit delta' complement(3066216..3067226) Pectobacterium wasabiae WPP163 8531205 YP_003260162.1 CDS tmk NC_013421.1 3067226 3067885 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(3067226..3067885) Pectobacterium wasabiae WPP163 8531206 YP_003260163.1 CDS Pecwa_2803 NC_013421.1 3067875 3068894 R PFAM: aminodeoxychorismate lyase; KEGG: pct:PC1_2499 aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(3067875..3068894) Pectobacterium wasabiae WPP163 8531207 YP_003260164.1 CDS Pecwa_2804 NC_013421.1 3068909 3069706 R catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase complement(3068909..3069706) Pectobacterium wasabiae WPP163 8531208 YP_003260165.1 CDS Pecwa_2805 NC_013421.1 3070192 3071226 R PFAM: periplasmic binding protein; KEGG: ccv:CCV52592_1611 periplasmic binding protein; periplasmic binding protein complement(3070192..3071226) Pectobacterium wasabiae WPP163 8531209 YP_003260166.1 CDS Pecwa_2806 NC_013421.1 3071465 3072706 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(3071465..3072706) Pectobacterium wasabiae WPP163 8531210 YP_003260167.1 CDS acpP NC_013421.1 3072788 3073024 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(3072788..3073024) Pectobacterium wasabiae WPP163 8531211 YP_003260168.1 CDS fabG NC_013421.1 3073178 3073912 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(3073178..3073912) Pectobacterium wasabiae WPP163 8531212 YP_003260169.1 CDS Pecwa_2809 NC_013421.1 3073927 3074856 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: eca:ECA1796 acyl carrier protein S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase complement(3073927..3074856) Pectobacterium wasabiae WPP163 8531213 YP_003260170.1 CDS Pecwa_2810 NC_013421.1 3074874 3075827 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(3074874..3075827) Pectobacterium wasabiae WPP163 8531214 YP_003260171.1 CDS Pecwa_2811 NC_013421.1 3075834 3076880 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(3075834..3076880) Pectobacterium wasabiae WPP163 8531215 YP_003260172.1 CDS rpmF NC_013421.1 3076910 3077080 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(3076910..3077080) Pectobacterium wasabiae WPP163 8531216 YP_003260173.1 CDS Pecwa_2813 NC_013421.1 3077097 3077618 R PFAM: protein of unknown function DUF177; KEGG: pct:PC1_2508 hypothetical protein; hypothetical protein complement(3077097..3077618) Pectobacterium wasabiae WPP163 8531217 YP_003260174.1 CDS Pecwa_2814 NC_013421.1 3077759 3078343 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 3077759..3078343 Pectobacterium wasabiae WPP163 8531218 YP_003260175.1 CDS Pecwa_2815 NC_013421.1 3078402 3079358 R catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; 23S rRNA pseudouridylate synthase C complement(3078402..3079358) Pectobacterium wasabiae WPP163 8531219 YP_003260176.1 CDS rne NC_013421.1 3079941 3083306 D bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase; ribonuclease E 3079941..3083306 Pectobacterium wasabiae WPP163 8531220 YP_003260177.1 CDS Pecwa_2817 NC_013421.1 3083369 3083656 R PFAM: antibiotic biosynthesis monooxygenase; KEGG: eca:ECA1788 hypothetical protein; antibiotic biosynthesis monooxygenase complement(3083369..3083656) Pectobacterium wasabiae WPP163 8531221 YP_003260178.1 CDS Pecwa_2818 NC_013421.1 3083841 3084884 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 3083841..3084884 Pectobacterium wasabiae WPP163 8531222 YP_003260179.1 CDS Pecwa_2819 NC_013421.1 3084990 3085229 D PFAM: DinI family protein; KEGG: pct:PC1_2514 DinI family protein; DNA damage-inducible protein I 3084990..3085229 Pectobacterium wasabiae WPP163 8531223 YP_003260180.1 CDS Pecwa_2820 NC_013421.1 3085318 3085575 D KEGG: eca:ECA1785 hypothetical protein; hypothetical protein 3085318..3085575 Pectobacterium wasabiae WPP163 8531224 YP_003260181.1 CDS bssS NC_013421.1 3085813 3086067 D BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssS 3085813..3086067 Pectobacterium wasabiae WPP163 8531225 YP_003260182.1 CDS Pecwa_2822 NC_013421.1 3086542 3087096 D PFAM: cytochrome B561; KEGG: eca:ECA1783 hypothetical protein; cytochrome B561 3086542..3087096 Pectobacterium wasabiae WPP163 8531226 YP_003260183.1 CDS Pecwa_2823 NC_013421.1 3087123 3087701 D PFAM: YceI family protein; KEGG: pct:PC1_2518 YceI family protein; hypothetical protein 3087123..3087701 Pectobacterium wasabiae WPP163 8531227 YP_003260184.1 CDS Pecwa_2824 NC_013421.1 3087777 3088844 R PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: eca:ECA1781 hypothetical protein; hypothetical protein complement(3087777..3088844) Pectobacterium wasabiae WPP163 8531228 YP_003260185.1 CDS Pecwa_2825 NC_013421.1 3089047 3090141 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eca:ECA1780 NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase 3089047..3090141 Pectobacterium wasabiae WPP163 8531229 YP_003260186.1 CDS Pecwa_2826 NC_013421.1 3090410 3091330 D acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 3090410..3091330 Pectobacterium wasabiae WPP163 8531230 YP_003260187.1 CDS Pecwa_2827 NC_013421.1 3091438 3094002 R necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH complement(3091438..3094002) Pectobacterium wasabiae WPP163 8531231 YP_003260188.1 CDS mdoG NC_013421.1 3093995 3095563 R involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G complement(3093995..3095563) Pectobacterium wasabiae WPP163 8531232 YP_003260189.1 CDS Pecwa_2829 NC_013421.1 3095940 3096422 D KEGG: eca:ECA1776 hypothetical protein; hypothetical protein 3095940..3096422 Pectobacterium wasabiae WPP163 8531233 YP_003260190.1 CDS Pecwa_2830 NC_013421.1 3096525 3098048 D PFAM: PepSY-associated TM helix domain protein; KEGG: pct:PC1_2525 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 3096525..3098048 Pectobacterium wasabiae WPP163 8531234 YP_003260191.1 CDS Pecwa_2831 NC_013421.1 3098144 3099808 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pct:PC1_2526 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3098144..3099808) Pectobacterium wasabiae WPP163 8531235 YP_003260192.1 CDS Pecwa_2832 NC_013421.1 3100652 3100933 R KEGG: eca:ECA1773 hypothetical protein; hypothetical protein complement(3100652..3100933) Pectobacterium wasabiae WPP163 8531236 YP_003260193.1 CDS Pecwa_2833 NC_013421.1 3101092 3101391 R KEGG: pct:PC1_2529 hypothetical protein; hypothetical protein complement(3101092..3101391) Pectobacterium wasabiae WPP163 8531237 YP_003260194.1 CDS Pecwa_2834 NC_013421.1 3101549 3101734 D PFAM: protein of unknown function DUF2566; KEGG: eca:ECA1771 hypothetical protein; hypothetical protein 3101549..3101734 Pectobacterium wasabiae WPP163 8531238 YP_003260195.1 CDS Pecwa_2835 NC_013421.1 3101806 3102312 D PFAM: protein of unknown function DUF523; KEGG: eca:ECA1770 hypothetical protein; hypothetical protein 3101806..3102312 Pectobacterium wasabiae WPP163 8531239 YP_003260196.1 CDS Pecwa_2836 NC_013421.1 3102366 3102794 R PFAM: UspA domain protein; KEGG: eca:ECA1769 hypothetical protein; UspA domain-containing protein complement(3102366..3102794) Pectobacterium wasabiae WPP163 8531240 YP_003260197.1 CDS Pecwa_2837 NC_013421.1 3102938 3103408 R PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_2533 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3102938..3103408) Pectobacterium wasabiae WPP163 8531241 YP_003260198.1 CDS Pecwa_2838 NC_013421.1 3103413 3103937 R PFAM: isochorismatase hydrolase; KEGG: pct:PC1_2534 isochorismatase hydrolase; isochorismatase hydrolase complement(3103413..3103937) Pectobacterium wasabiae WPP163 8531242 YP_003260199.1 CDS Pecwa_2839 NC_013421.1 3104015 3104437 R PFAM: NUDIX hydrolase; KEGG: eca:ECA1766 hypothetical protein; NUDIX hydrolase complement(3104015..3104437) Pectobacterium wasabiae WPP163 8531243 YP_003260200.1 CDS Pecwa_2840 NC_013421.1 3104904 3105158 D KEGG: pct:PC1_2536 hypothetical protein; hypothetical protein 3104904..3105158 Pectobacterium wasabiae WPP163 8531244 YP_003260201.1 CDS Pecwa_2842 NC_013421.1 3106671 3107072 D PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: eca:ECA1665 DNA-binding protein Hns; histone family protein nucleoid-structuring protein H-NS 3106671..3107072 Pectobacterium wasabiae WPP163 8531246 YP_003260202.1 CDS Pecwa_2843 NC_013421.1 3107130 3107426 R PFAM: colicin immunity protein/pyocin immunity protein; KEGG: ses:SARI_02581 hypothetical protein; colicin immunity protein/pyocin immunity protein complement(3107130..3107426) Pectobacterium wasabiae WPP163 8531247 YP_003260203.1 CDS Pecwa_2844 NC_013421.1 3107505 3107705 R PFAM: transposase IS3/IS911 family protein; KEGG: ppg:PputGB1_5424 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(3107505..3107705) Pectobacterium wasabiae WPP163 8531248 YP_003260204.1 CDS Pecwa_2845 NC_013421.1 3107993 3108208 D KEGG: ent:Ent638_1886 hypothetical protein; hypothetical protein 3107993..3108208 Pectobacterium wasabiae WPP163 8531249 YP_003260205.1 CDS Pecwa_2846 NC_013421.1 3108957 3109616 D PFAM: protein of unknown function UPF0005; KEGG: pct:PC1_2537 hypothetical protein; hypothetical protein 3108957..3109616 Pectobacterium wasabiae WPP163 8531251 YP_003260206.1 CDS Pecwa_2847 NC_013421.1 3109728 3110057 D TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: eca:ECA1762 hypothetical protein; TusE/DsrC/DsvC family sulfur relay protein 3109728..3110057 Pectobacterium wasabiae WPP163 8531252 YP_003260207.1 CDS Pecwa_2848 NC_013421.1 3110068 3110346 R PFAM: acylphosphatase; KEGG: eca:ECA1761 acylphosphatase; acylphosphatase complement(3110068..3110346) Pectobacterium wasabiae WPP163 8531253 YP_003260208.1 CDS Pecwa_2849 NC_013421.1 3110580 3110888 D TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: pct:PC1_2540 hemimethylated DNA binding protein; heat shock protein HspQ 3110580..3110888 Pectobacterium wasabiae WPP163 8531254 YP_003260209.1 CDS Pecwa_2850 NC_013421.1 3110969 3111382 R PFAM: CoA-binding protein; KEGG: pct:PC1_2541 CoA-binding protein; CoA-binding protein complement(3110969..3111382) Pectobacterium wasabiae WPP163 8531255 YP_003260210.1 CDS Pecwa_2851 NC_013421.1 3111578 3112102 D PFAM: protein of unknown function DUF2057; KEGG: eca:ECA1758 hypothetical protein; hypothetical protein 3111578..3112102 Pectobacterium wasabiae WPP163 8531256 YP_003260211.1 CDS mgsA NC_013421.1 3112240 3112698 D catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 3112240..3112698 Pectobacterium wasabiae WPP163 8531257 YP_003260212.1 CDS helD NC_013421.1 3112777 3114834 R catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV complement(3112777..3114834) Pectobacterium wasabiae WPP163 8531258 YP_003260213.1 CDS Pecwa_2854 NC_013421.1 3115021 3115467 D PFAM: protein of unknown function DUF307; KEGG: eca:ECA1755 hypothetical protein; hypothetical protein 3115021..3115467 Pectobacterium wasabiae WPP163 8531259 YP_003260214.1 CDS Pecwa_2855 NC_013421.1 3115488 3117623 D TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: pct:PC1_2546 hypothetical protein; hypothetical protein 3115488..3117623 Pectobacterium wasabiae WPP163 8531260 YP_003260215.1 CDS Pecwa_2856 NC_013421.1 3117639 3118259 R PFAM: TfoX domain protein; KEGG: pct:PC1_2547 regulator of competence-specific genes; competence-specific genes regulator complement(3117639..3118259) Pectobacterium wasabiae WPP163 8531261 YP_003260216.1 CDS Pecwa_2857 NC_013421.1 3118482 3118988 D PFAM: cell division inhibitor SulA; KEGG: pct:PC1_2548 cell division inhibitor SulA; SOS cell division inhibitor 3118482..3118988 Pectobacterium wasabiae WPP163 8531262 YP_003260217.1 CDS Pecwa_2858 NC_013421.1 3119351 3120436 D OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; outer membrane protein A 3119351..3120436 Pectobacterium wasabiae WPP163 8531263 YP_003260218.1 CDS Pecwa_2859 NC_013421.1 3120589 3121050 R PFAM: protein of unknown function DUF1047; KEGG: eca:ECA1750 hypothetical protein; hypothetical protein complement(3120589..3121050) Pectobacterium wasabiae WPP163 8531264 YP_003260219.1 CDS Pecwa_2860 NC_013421.1 3121227 3122996 D KEGG: pct:PC1_2551 hypothetical protein; hypothetical protein 3121227..3122996 Pectobacterium wasabiae WPP163 8531265 YP_003260220.1 CDS Pecwa_2861 NC_013421.1 3123088 3123606 D catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 3123088..3123606 Pectobacterium wasabiae WPP163 8531266 YP_003260221.1 CDS Pecwa_2862 NC_013421.1 3123703 3124356 R PFAM: protein of unknown function DUF533; KEGG: eca:ECA1747 hypothetical protein; hypothetical protein complement(3123703..3124356) Pectobacterium wasabiae WPP163 8531267 YP_003260222.1 CDS Pecwa_2864 NC_013421.1 3124851 3125489 D PFAM: ribose/galactose isomerase; KEGG: pct:PC1_2558 ribose/galactose isomerase; hypothetical protein 3124851..3125489 Pectobacterium wasabiae WPP163 8531269 YP_003260223.1 CDS Pecwa_2865 NC_013421.1 3126235 3126546 D KEGG: eca:ECA1674 hypothetical protein; hypothetical protein 3126235..3126546 Pectobacterium wasabiae WPP163 8531271 YP_003260224.1 CDS Pecwa_2866 NC_013421.1 3127111 3127356 D KEGG: pct:PC1_1466 hypothetical protein; hypothetical protein 3127111..3127356 Pectobacterium wasabiae WPP163 8531272 YP_003260225.1 CDS Pecwa_2867 NC_013421.1 3127611 3128150 D PFAM: protein of unknown function DUF2058; KEGG: eca:ECA1578 hypothetical protein; hypothetical protein 3127611..3128150 Pectobacterium wasabiae WPP163 8531273 YP_003260226.1 CDS Pecwa_2868 NC_013421.1 3128444 3128926 D PFAM: Cold-shock protein DNA-binding; KEGG: eca:ECA1580 cold-shock protein; cold-shock protein 3128444..3128926 Pectobacterium wasabiae WPP163 8531274 YP_003260227.1 CDS Pecwa_2869 NC_013421.1 3129000 3130070 R KEGG: hypothetical protein; hypothetical protein complement(3129000..3130070) Pectobacterium wasabiae WPP163 8531275 YP_003260228.1 CDS Pecwa_2870 NC_013421.1 3130486 3130815 R KEGG: eca:ECA2760 hypothetical protein; hypothetical protein complement(3130486..3130815) Pectobacterium wasabiae WPP163 8531276 YP_003260229.1 CDS Pecwa_2871 NC_013421.1 3130873 3131409 R PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: eca:ECA2761 hypothetical protein; rhodanese complement(3130873..3131409) Pectobacterium wasabiae WPP163 8531277 YP_003260230.1 CDS Pecwa_2872 NC_013421.1 3131759 3133183 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: eca:ECA2762 hypothetical protein; hypothetical protein 3131759..3133183 Pectobacterium wasabiae WPP163 8531278 YP_003260231.1 CDS Pecwa_2873 NC_013421.1 3133231 3134400 R PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1589 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(3133231..3134400) Pectobacterium wasabiae WPP163 8531279 YP_003260232.1 CDS ompX NC_013421.1 3134691 3135206 R OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X complement(3134691..3135206) Pectobacterium wasabiae WPP163 8531280 YP_003260233.1 CDS Pecwa_2875 NC_013421.1 3135583 3136464 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA2765 threonine and homoserine efflux system; threonine and homoserine efflux system 3135583..3136464 Pectobacterium wasabiae WPP163 8531281 YP_003260234.1 CDS Pecwa_2876 NC_013421.1 3136478 3137017 R KEGG: eca:ECA2766 hypothetical protein; hypothetical protein complement(3136478..3137017) Pectobacterium wasabiae WPP163 8531282 YP_003260235.1 CDS Pecwa_2877 NC_013421.1 3137331 3137834 D binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps 3137331..3137834 Pectobacterium wasabiae WPP163 8531283 YP_003260236.1 CDS glnH NC_013421.1 3138232 3138978 D similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein 3138232..3138978 Pectobacterium wasabiae WPP163 8531284 YP_003260237.1 CDS glnP NC_013421.1 3139005 3139664 D similar to permease of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 3139005..3139664 Pectobacterium wasabiae WPP163 8531285 YP_003260238.1 CDS glnQ NC_013421.1 3139661 3140383 D similar to ATP-binding protein of ABC transporters; glutamine ABC transporter ATP-binding protein 3139661..3140383 Pectobacterium wasabiae WPP163 8531286 YP_003260239.1 CDS Pecwa_2881 NC_013421.1 3140423 3142291 R PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: eca:ECA2771 peptidase; peptidase M3A and M3B thimet/oligopeptidase F complement(3140423..3142291) Pectobacterium wasabiae WPP163 8531287 YP_003260240.1 CDS Pecwa_2882 NC_013421.1 3142378 3143346 R PFAM: glycosyl transferase, family 3-like; KEGG: eca:ECA2772 glycosyl transferase; glycosyl transferase family protein complement(3142378..3143346) Pectobacterium wasabiae WPP163 8531288 YP_003260241.1 CDS Pecwa_2884 NC_013421.1 3144412 3144741 R hypothetical protein complement(3144412..3144741) Pectobacterium wasabiae WPP163 8531290 YP_003260242.1 CDS Pecwa_2885 NC_013421.1 3144791 3146179 R KEGG: eca:ECA3741 bacteriophage tail fiber protein; bacteriophage tail fiber protein complement(3144791..3146179) Pectobacterium wasabiae WPP163 8531291 YP_003260243.1 CDS Pecwa_2886 NC_013421.1 3146182 3146763 R TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: pct:PC1_1576 phage tail protein I; phage tail protein I complement(3146182..3146763) Pectobacterium wasabiae WPP163 8531292 YP_003260244.1 CDS Pecwa_2887 NC_013421.1 3146756 3147859 R PFAM: Baseplate J family protein; KEGG: pct:PC1_1575 baseplate J family protein; baseplate J family protein complement(3146756..3147859) Pectobacterium wasabiae WPP163 8531293 YP_003260245.1 CDS Pecwa_2888 NC_013421.1 3147850 3148197 R PFAM: GPW/gp25 family protein; KEGG: pct:PC1_1574 gpW/GP25 family protein; GPW/gp25 family protein complement(3147850..3148197) Pectobacterium wasabiae WPP163 8531294 YP_003260246.1 CDS Pecwa_2889 NC_013421.1 3148257 3148838 R TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: pct:PC1_1573 phage baseplate assembly protein V; phage baseplate assembly protein V complement(3148257..3148838) Pectobacterium wasabiae WPP163 8531295 YP_003260247.1 CDS Pecwa_2890 NC_013421.1 3148835 3149989 R PFAM: late control D family protein; KEGG: pct:PC1_1572 late control D family protein; late control D family protein complement(3148835..3149989) Pectobacterium wasabiae WPP163 8531296 YP_003260248.1 CDS Pecwa_2891 NC_013421.1 3149977 3150189 R PFAM: tail X family protein; KEGG: pct:PC1_1571 tail X family protein; tail X family protein complement(3149977..3150189) Pectobacterium wasabiae WPP163 8531297 YP_003260249.1 CDS Pecwa_2892 NC_013421.1 3150189 3151106 R PFAM: P2 GpU family protein; KEGG: pct:PC1_1570 P2 GpU family protein; P2 GpU family protein complement(3150189..3151106) Pectobacterium wasabiae WPP163 8531298 YP_003260250.1 CDS Pecwa_2893 NC_013421.1 3151106 3153559 R TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: pct:PC1_1569 phage tail tape measure protein, TP901 family; phage tail tape measure protein, TP901 family complement(3151106..3153559) Pectobacterium wasabiae WPP163 8531299 YP_003260251.1 CDS Pecwa_2894 NC_013421.1 3153776 3153922 R KEGG: see:SNSL254_A4551 hypothetical protein; hypothetical protein complement(3153776..3153922) Pectobacterium wasabiae WPP163 8531300 YP_003260252.1 CDS Pecwa_2895 NC_013421.1 3153864 3154184 R KEGG: pct:PC1_1568 hypothetical protein; hypothetical protein complement(3153864..3154184) Pectobacterium wasabiae WPP163 8531301 YP_003260253.1 CDS Pecwa_2896 NC_013421.1 3154327 3154851 R TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pct:PC1_1566 phage major tail tube protein; phage major tail tube protein complement(3154327..3154851) Pectobacterium wasabiae WPP163 8531302 YP_003260254.1 CDS Pecwa_2897 NC_013421.1 3154851 3156278 R PFAM: tail sheath protein; KEGG: pct:PC1_1565 tail sheath protein; tail sheath protein complement(3154851..3156278) Pectobacterium wasabiae WPP163 8531303 YP_003260255.1 CDS Pecwa_2898 NC_013421.1 3156268 3156465 R KEGG: pct:PC1_1564 hypothetical protein; hypothetical protein complement(3156268..3156465) Pectobacterium wasabiae WPP163 8531304 YP_003260256.1 CDS Pecwa_2899 NC_013421.1 3156462 3156929 R PFAM: protein of unknown function Gp37; KEGG: pct:PC1_1563 hypothetical protein; hypothetical protein complement(3156462..3156929) Pectobacterium wasabiae WPP163 8531305 YP_003260257.1 CDS Pecwa_2900 NC_013421.1 3157173 3157484 R KEGG: eca:ECA2776 hypothetical protein; hypothetical protein complement(3157173..3157484) Pectobacterium wasabiae WPP163 8531306 YP_003260258.1 CDS Pecwa_2901 NC_013421.1 3157477 3157806 R KEGG: eca:ECA2777 hypothetical protein; hypothetical protein complement(3157477..3157806) Pectobacterium wasabiae WPP163 8531307 YP_003260259.1 CDS Pecwa_2902 NC_013421.1 3157796 3158470 R KEGG: pct:PC1_1560 hypothetical protein; hypothetical protein complement(3157796..3158470) Pectobacterium wasabiae WPP163 8531308 YP_003260260.1 CDS Pecwa_2903 NC_013421.1 3158460 3159071 R PFAM: lytic transglycosylase catalytic; KEGG: eca:ECA2779 transglycosylase; lytic transglycosylase complement(3158460..3159071) Pectobacterium wasabiae WPP163 8531309 YP_003260261.1 CDS Pecwa_2904 NC_013421.1 3159073 3159402 R KEGG: pct:PC1_1558 hypothetical protein; hypothetical protein complement(3159073..3159402) Pectobacterium wasabiae WPP163 8531310 YP_003260262.1 CDS Pecwa_2905 NC_013421.1 3159619 3160986 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pct:PC1_1557 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein complement(3159619..3160986) Pectobacterium wasabiae WPP163 8531311 YP_003260263.1 CDS Pecwa_2906 NC_013421.1 3160989 3162317 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: hypothetical protein; KEGG: eca:ECA2782 protease hypothetical protein; HlyD family type I secretion membrane fusion protein complement(3160989..3162317) Pectobacterium wasabiae WPP163 8531312 YP_003260264.1 CDS Pecwa_2907 NC_013421.1 3162346 3164073 R KEGG: eca:ECA2783 protease secretion ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; type I secretion system ATPase complement(3162346..3164073) Pectobacterium wasabiae WPP163 8531313 YP_003260265.1 CDS Pecwa_2908 NC_013421.1 3164091 3164402 R PFAM: metalloprotease inhibitor I38; KEGG: eca:ECA2784 protease inhibitor; metalloprotease inhibitor I38 complement(3164091..3164402) Pectobacterium wasabiae WPP163 8531314 YP_003260266.1 CDS Pecwa_2909 NC_013421.1 3164506 3165930 R KEGG: pct:PC1_1553 serralysin; PFAM: peptidase M10 serralysin ; Hemolysin-type calcium-binding region; peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; serralysin complement(3164506..3165930) Pectobacterium wasabiae WPP163 8531315 YP_003260267.1 CDS dinG NC_013421.1 3166439 3168538 R helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG complement(3166439..3168538) Pectobacterium wasabiae WPP163 8531316 YP_003260268.1 CDS Pecwa_2911 NC_013421.1 3168753 3169586 D PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA2787 AraC family transcription regulator; AraC family transcriptional regulator 3168753..3169586 Pectobacterium wasabiae WPP163 8531317 YP_003260269.1 CDS Pecwa_2912 NC_013421.1 3169639 3170286 D PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA2788 LysE family translocator; lysine exporter protein LysE/YggA 3169639..3170286 Pectobacterium wasabiae WPP163 8531318 YP_003260270.1 CDS Pecwa_2913 NC_013421.1 3170378 3170485 D KEGG: pct:PC1_1549 hypothetical protein; hypothetical protein 3170378..3170485 Pectobacterium wasabiae WPP163 8531319 YP_003260271.1 CDS Pecwa_2914 NC_013421.1 3170561 3171100 R KEGG: eca:ECA2789 isopentenyl-diphosphate delta-isomerase; TIGRFAM: isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase complement(3170561..3171100) Pectobacterium wasabiae WPP163 8531320 YP_003260272.1 CDS Pecwa_2915 NC_013421.1 3171221 3173527 R PFAM: glycoside hydrolase; KEGG: eca:ECA2790 periplasmic beta-glucosidase; glycoside hydrolase complement(3171221..3173527) Pectobacterium wasabiae WPP163 8531321 YP_003260273.1 CDS Pecwa_2916 NC_013421.1 3173873 3175219 R PFAM: aminotransferase class-III; KEGG: pct:PC1_1546 aminotransferase class-III; class III aminotransferase complement(3173873..3175219) Pectobacterium wasabiae WPP163 8531322 YP_003260274.1 CDS Pecwa_2917 NC_013421.1 3175634 3176653 D PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_1545 extracellular solute-binding protein family 1; extracellular solute-binding protein 3175634..3176653 Pectobacterium wasabiae WPP163 8531323 YP_003260275.1 CDS Pecwa_2918 NC_013421.1 3176731 3177741 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: pct:PC1_1544 ABC transporter; ABC transporter 3176731..3177741 Pectobacterium wasabiae WPP163 8531324 YP_003260276.1 CDS Pecwa_2919 NC_013421.1 3177738 3179390 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1543 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 3177738..3179390 Pectobacterium wasabiae WPP163 8531325 YP_003260277.1 CDS Pecwa_2920 NC_013421.1 3179422 3180192 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: pct:PC1_1542 DeoR family transcriptional regulator; DeoR family transcriptional regulator 3179422..3180192 Pectobacterium wasabiae WPP163 8531326 YP_003260278.1 CDS Pecwa_2921 NC_013421.1 3180339 3181025 D PFAM: glutathione S-transferase domain; KEGG: eca:ECA2791 glutathione S-transferase; glutathione S-transferase 3180339..3181025 Pectobacterium wasabiae WPP163 8531327 YP_003260279.1 CDS pbpG NC_013421.1 3181094 3182041 R specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase complement(3181094..3182041) Pectobacterium wasabiae WPP163 8531328 YP_003260280.1 CDS Pecwa_2923 NC_013421.1 3182355 3182711 R PFAM: FMN-binding domain protein; KEGG: eca:ECA2794 hypothetical protein; FMN-binding domain-containing protein complement(3182355..3182711) Pectobacterium wasabiae WPP163 8531329 YP_003260281.1 CDS Pecwa_2924 NC_013421.1 3182771 3183313 R TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: eca:ECA2795 adenylate cyclase; adenylyl cyclase CyaB complement(3182771..3183313) Pectobacterium wasabiae WPP163 8531330 YP_003260282.1 CDS Pecwa_2925 NC_013421.1 3183650 3184198 R KEGG: eca:ECA2796 hypothetical protein; hypothetical protein complement(3183650..3184198) Pectobacterium wasabiae WPP163 8531331 YP_003260283.1 CDS mmuM NC_013421.1 3184221 3185162 R converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase complement(3184221..3185162) Pectobacterium wasabiae WPP163 8531332 YP_003260284.1 CDS Pecwa_2927 NC_013421.1 3185155 3186567 R PFAM: amino acid permease-associated region; KEGG: pct:PC1_1534 amino acid permease-associated region; S-methylmethionine transporter complement(3185155..3186567) Pectobacterium wasabiae WPP163 8531333 YP_003260285.1 CDS Pecwa_2928 NC_013421.1 3186763 3187695 R PFAM: dihydrouridine synthase; KEGG: eca:ECA2799 tRNA-dihydrouridine synthase C; tRNA-dihydrouridine synthase C complement(3186763..3187695) Pectobacterium wasabiae WPP163 8531334 YP_003260286.1 CDS Pecwa_2929 NC_013421.1 3187927 3188598 D PFAM: protein of unknown function DUF208; KEGG: eca:ECA2800 hypothetical protein; hypothetical protein 3187927..3188598 Pectobacterium wasabiae WPP163 8531335 YP_003260287.1 CDS Pecwa_2930 NC_013421.1 3188646 3190241 R PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_1531 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(3188646..3190241) Pectobacterium wasabiae WPP163 8531336 YP_003260288.1 CDS Pecwa_2931 NC_013421.1 3190382 3191611 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3190382..3191611 Pectobacterium wasabiae WPP163 8531337 YP_003260289.1 CDS Pecwa_2932 NC_013421.1 3191671 3192552 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: dda:Dd703_2413 AraC family transcriptional regulator; AraC family transcriptional regulator complement(3191671..3192552) Pectobacterium wasabiae WPP163 8531338 YP_003260290.1 CDS Pecwa_2933 NC_013421.1 3192668 3193567 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: dda:Dd703_2418 protein of unknown function DUF6 transmembrane; hypothetical protein 3192668..3193567 Pectobacterium wasabiae WPP163 8531339 YP_003260291.1 CDS Pecwa_2935 NC_013421.1 3195030 3196460 R this helicase is not essential cell growth; ATP-dependent RNA helicase RhlE complement(3195030..3196460) Pectobacterium wasabiae WPP163 8531341 YP_003260292.1 CDS Pecwa_2936 NC_013421.1 3196682 3197494 R KEGG: pct:PC1_1527 hypothetical protein; hypothetical protein complement(3196682..3197494) Pectobacterium wasabiae WPP163 8531342 YP_003260293.1 CDS Pecwa_2937 NC_013421.1 3197484 3198338 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_1526 ABC transporter; ABC transporter complement(3197484..3198338) Pectobacterium wasabiae WPP163 8531343 YP_003260294.1 CDS Pecwa_2938 NC_013421.1 3198348 3199379 R PFAM: transporter permease; KEGG: pct:PC1_1525 transporter permease; transporter permease complement(3198348..3199379) Pectobacterium wasabiae WPP163 8531344 YP_003260295.1 CDS Pecwa_2939 NC_013421.1 3199372 3200361 R PFAM: transporter permease; KEGG: eca:ECA2808 achromobactin transporter permease; transporter permease complement(3199372..3200361) Pectobacterium wasabiae WPP163 8531345 YP_003260296.1 CDS Pecwa_2940 NC_013421.1 3200358 3201308 R PFAM: periplasmic binding protein; KEGG: eca:ECA2809 achromobactin-binding periplasmic protein; periplasmic binding protein complement(3200358..3201308) Pectobacterium wasabiae WPP163 8531346 YP_003260297.1 CDS Pecwa_2941 NC_013421.1 3201367 3203472 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pct:PC1_1522 TonB-dependent receptor; TonB-dependent receptor complement(3201367..3203472) Pectobacterium wasabiae WPP163 8531347 YP_003260298.1 CDS Pecwa_2942 NC_013421.1 3204003 3205031 D PFAM: hypothetical protein; KEGG: pct:PC1_1521 hypothetical protein; hypothetical protein 3204003..3205031 Pectobacterium wasabiae WPP163 8531348 YP_003260299.1 CDS Pecwa_2943 NC_013421.1 3205009 3206766 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_1520 ABC transporter; ABC transporter 3205009..3206766 Pectobacterium wasabiae WPP163 8531349 YP_003260300.1 CDS Pecwa_2944 NC_013421.1 3206759 3207934 D PFAM: ABC transporter; KEGG: pct:PC1_1519 ABC-2 type transporter; ABC transporter 3206759..3207934 Pectobacterium wasabiae WPP163 8531350 YP_003260301.1 CDS Pecwa_2945 NC_013421.1 3207944 3209080 D PFAM: ABC transporter; KEGG: pct:PC1_1518 ABC-2 type transporter; ABC transporter 3207944..3209080 Pectobacterium wasabiae WPP163 8531351 YP_003260302.1 CDS Pecwa_2946 NC_013421.1 3209042 3209197 R hypothetical protein complement(3209042..3209197) Pectobacterium wasabiae WPP163 8531352 YP_003260303.1 CDS Pecwa_2947 NC_013421.1 3209314 3210021 R PFAM: protein of unknown function UPF0005; KEGG: pct:PC1_1517 hypothetical protein; hypothetical protein complement(3209314..3210021) Pectobacterium wasabiae WPP163 8531353 YP_003260304.1 CDS moaE NC_013421.1 3210134 3210586 R catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE complement(3210134..3210586) Pectobacterium wasabiae WPP163 8531354 YP_003260305.1 CDS moaD NC_013421.1 3210589 3210834 R catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit complement(3210589..3210834) Pectobacterium wasabiae WPP163 8531355 YP_003260306.1 CDS moaC NC_013421.1 3210831 3211325 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(3210831..3211325) Pectobacterium wasabiae WPP163 8531356 YP_003260307.1 CDS Pecwa_2951 NC_013421.1 3211344 3211862 R TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis protein; PFAM: molybdopterin binding domain; KEGG: eca:ECA2816 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B complement(3211344..3211862) Pectobacterium wasabiae WPP163 8531357 YP_003260308.1 CDS moaA NC_013421.1 3211897 3212919 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(3211897..3212919) Pectobacterium wasabiae WPP163 8531358 YP_003260309.1 CDS Pecwa_2953 NC_013421.1 3213296 3214204 D PFAM: protein of unknown function UPF0052 and CofD; KEGG: eca:ECA2818 hypothetical protein; hypothetical protein 3213296..3214204 Pectobacterium wasabiae WPP163 8531359 YP_003260310.1 CDS Pecwa_2954 NC_013421.1 3214210 3214785 R KEGG: hypothetical protein; hypothetical protein complement(3214210..3214785) Pectobacterium wasabiae WPP163 8531360 YP_003260311.1 CDS Pecwa_2955 NC_013421.1 3214915 3215346 R KEGG: eca:ECA2819 hypothetical protein; hypothetical protein complement(3214915..3215346) Pectobacterium wasabiae WPP163 8531361 YP_003260312.1 CDS Pecwa_2956 NC_013421.1 3215409 3217421 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-subunit beta is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(3215409..3217421) Pectobacterium wasabiae WPP163 8531362 YP_003260313.1 CDS Pecwa_2958 NC_013421.1 3218409 3219485 R KEGG: spe:Spro_0389 hypothetical protein; hypothetical protein complement(3218409..3219485) Pectobacterium wasabiae WPP163 8531364 YP_003260314.1 CDS bioD NC_013421.1 3219861 3220544 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(3219861..3220544) Pectobacterium wasabiae WPP163 8531367 YP_003260315.1 CDS Pecwa_2962 NC_013421.1 3220537 3221298 R TIGRFAM: biotin biosynthesis protein BioC; PFAM: methyltransferase type 11; tellurite resistance methyltransferase, TehB, core; methyltransferase type 12; KEGG: pct:PC1_1507 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC complement(3220537..3221298) Pectobacterium wasabiae WPP163 8531368 YP_003260316.1 CDS Pecwa_2963 NC_013421.1 3221279 3222436 R catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase complement(3221279..3222436) Pectobacterium wasabiae WPP163 8531369 YP_003260317.1 CDS Pecwa_2964 NC_013421.1 3222476 3223513 R KEGG: eca:ECA2825 biotin synthase; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(3222476..3223513) Pectobacterium wasabiae WPP163 8531370 YP_003260318.1 CDS Pecwa_2965 NC_013421.1 3223609 3224913 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3223609..3224913 Pectobacterium wasabiae WPP163 8531371 YP_003260319.1 CDS Pecwa_2966 NC_013421.1 3225153 3225947 D PFAM: glycoside hydrolase family 12; KEGG: pct:PC1_1503 cellulase; cellulase 3225153..3225947 Pectobacterium wasabiae WPP163 8531372 YP_003260320.1 CDS Pecwa_2967 NC_013421.1 3226171 3226578 D PFAM: LrgA family protein; KEGG: pct:PC1_1498 LrgA family protein; hypothetical protein 3226171..3226578 Pectobacterium wasabiae WPP163 8531373 YP_003260321.1 CDS Pecwa_2968 NC_013421.1 3226578 3227276 D PFAM: LrgB family protein; KEGG: pct:PC1_1497 LrgB family protein; hypothetical protein 3226578..3227276 Pectobacterium wasabiae WPP163 8531374 YP_003260322.1 CDS Pecwa_2969 NC_013421.1 3227309 3228628 D KEGG: pct:PC1_1496 hypothetical protein; hypothetical protein 3227309..3228628 Pectobacterium wasabiae WPP163 8531375 YP_003260323.1 CDS Pecwa_2970 NC_013421.1 3228887 3229777 D Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 3228887..3229777 Pectobacterium wasabiae WPP163 8531376 YP_003260324.1 CDS Pecwa_2971 NC_013421.1 3229988 3231685 D malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 3229988..3231685 Pectobacterium wasabiae WPP163 8531377 YP_003260325.1 CDS Pecwa_2972 NC_013421.1 3231741 3232646 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1493 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(3231741..3232646) Pectobacterium wasabiae WPP163 8531378 YP_003260326.1 CDS Pecwa_2973 NC_013421.1 3232656 3233576 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1492 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(3232656..3233576) Pectobacterium wasabiae WPP163 8531379 YP_003260327.1 CDS Pecwa_2974 NC_013421.1 3233686 3235230 R PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2834 ABC transporter periplasmic protein; family 5 extracellular solute-binding protein complement(3233686..3235230) Pectobacterium wasabiae WPP163 8531380 YP_003260328.1 CDS Pecwa_2975 NC_013421.1 3235256 3237157 R KEGG: eca:ECA2835 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; oligopeptide/dipeptide ABC transporter ATPase complement(3235256..3237157) Pectobacterium wasabiae WPP163 8531381 YP_003260329.1 CDS Pecwa_2976 NC_013421.1 3237633 3238868 D is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA 3237633..3238868 Pectobacterium wasabiae WPP163 8531382 YP_003260330.1 CDS Pecwa_2977 NC_013421.1 3238871 3239623 D ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 3238871..3239623 Pectobacterium wasabiae WPP163 8531383 YP_003260331.1 CDS Pecwa_2978 NC_013421.1 3239729 3240328 D PFAM: nitroreductase; KEGG: eca:ECA2838 hypothetical protein; nitroreductase 3239729..3240328 Pectobacterium wasabiae WPP163 8531384 YP_003260332.1 CDS Pecwa_2979 NC_013421.1 3240642 3242114 D KEGG: eca:ECA2840 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3240642..3242114 Pectobacterium wasabiae WPP163 8531385 YP_003260333.1 CDS Pecwa_2980 NC_013421.1 3242213 3242380 R PFAM: protein of unknown function UPF0057; KEGG: eca:ECA2844 hypothetical protein; hypothetical protein complement(3242213..3242380) Pectobacterium wasabiae WPP163 8531386 YP_003260334.1 CDS Pecwa_2981 NC_013421.1 3242575 3244584 R TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eca:ECA2845 TonB dependent receptor; TonB-dependent copper receptor complement(3242575..3244584) Pectobacterium wasabiae WPP163 8531387 YP_003260335.1 CDS Pecwa_2982 NC_013421.1 3244693 3245139 R KEGG: eca:ECA2846 hypothetical protein; hypothetical protein complement(3244693..3245139) Pectobacterium wasabiae WPP163 8531388 YP_003260336.1 CDS Pecwa_2983 NC_013421.1 3245200 3245679 R KEGG: dze:Dd1591_2165 hypothetical protein; hypothetical protein complement(3245200..3245679) Pectobacterium wasabiae WPP163 8531389 YP_003260337.1 CDS Pecwa_2984 NC_013421.1 3246035 3247456 D KEGG: bav:BAV2779 lipoprotein; hypothetical protein 3246035..3247456 Pectobacterium wasabiae WPP163 8531390 YP_003260338.1 CDS Pecwa_2985 NC_013421.1 3247722 3248153 R hypothetical protein complement(3247722..3248153) Pectobacterium wasabiae WPP163 8531391 YP_003260339.1 CDS Pecwa_2986 NC_013421.1 3248708 3249298 R PFAM: flavin reductase domain protein FMN-binding; KEGG: eca:ECA1475 hypothetical protein; flavin reductase complement(3248708..3249298) Pectobacterium wasabiae WPP163 8531392 YP_003260340.1 CDS Pecwa_2987 NC_013421.1 3249677 3250009 D PFAM: protein of unknown function DUF1971; KEGG: pct:PC1_1354 hypothetical protein; hypothetical protein 3249677..3250009 Pectobacterium wasabiae WPP163 8531393 YP_003260341.1 CDS Pecwa_2988 NC_013421.1 3250020 3250358 D PFAM: Domain of unknown function DUF1869; KEGG: pct:PC1_1353 domain of unknown function DUF1869; hypothetical protein 3250020..3250358 Pectobacterium wasabiae WPP163 8531394 YP_003260342.1 CDS Pecwa_2989 NC_013421.1 3250852 3251898 D PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA1470 ABC transporter substrate binding protein; extracellular solute-binding protein 3250852..3251898 Pectobacterium wasabiae WPP163 8531395 YP_003260343.1 CDS Pecwa_2990 NC_013421.1 3251882 3253579 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1469 ABC transporter permease; binding-protein-dependent transporters inner membrane component 3251882..3253579 Pectobacterium wasabiae WPP163 8531396 YP_003260344.1 CDS Pecwa_2991 NC_013421.1 3253601 3254275 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_1344 ABC transporter; ABC transporter 3253601..3254275 Pectobacterium wasabiae WPP163 8531397 YP_003260345.1 CDS Pecwa_2992 NC_013421.1 3254346 3254603 R hypothetical protein complement(3254346..3254603) Pectobacterium wasabiae WPP163 8531398 YP_003260346.1 CDS Pecwa_2993 NC_013421.1 3254630 3255337 R PFAM: Zeta toxin family protein; KEGG: shn:Shewana3_1822 zeta toxin family protein; Zeta toxin family protein complement(3254630..3255337) Pectobacterium wasabiae WPP163 8531399 YP_003260347.1 CDS Pecwa_2994 NC_013421.1 3255516 3256346 R PFAM: myo-inositol catabolism IolB domain protein; KEGG: eca:ECA1465 hypothetical protein; myo-inositol catabolism IolB domain protein complement(3255516..3256346) Pectobacterium wasabiae WPP163 8531400 YP_003260348.1 CDS Pecwa_2995 NC_013421.1 3256372 3257262 R PFAM: xylose isomerase; KEGG: pct:PC1_1342 myo-inosose-2 dehydratase; myo-inosose-2 dehydratase complement(3256372..3257262) Pectobacterium wasabiae WPP163 8531401 YP_003260349.1 CDS Pecwa_2996 NC_013421.1 3257295 3259199 R PFAM: protein of unknown function DUF2090; PfkB domain protein; KEGG: eca:ECA1463 carbohydrate kinase; hypothetical protein complement(3257295..3259199) Pectobacterium wasabiae WPP163 8531402 YP_003260350.1 CDS Pecwa_2997 NC_013421.1 3259241 3260374 R PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: pct:PC1_1340 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(3259241..3260374) Pectobacterium wasabiae WPP163 8531403 YP_003260351.1 CDS Pecwa_2998 NC_013421.1 3260414 3261445 R PFAM: inner-membrane translocator; KEGG: eca:ECA1461 sugar ABC transporter permease; inner-membrane translocator complement(3260414..3261445) Pectobacterium wasabiae WPP163 8531404 YP_003260352.1 CDS Pecwa_2999 NC_013421.1 3261458 3263005 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA1460 sugar ABC transporter ATP-binding protein; ABC transporter complement(3261458..3263005) Pectobacterium wasabiae WPP163 8531405 YP_003260353.1 CDS Pecwa_3000 NC_013421.1 3263227 3264165 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA1459 sugar ABC transporter periplasmic protein; periplasmic binding protein/LacI transcriptional regulator complement(3263227..3264165) Pectobacterium wasabiae WPP163 8531406 YP_003260354.1 CDS Pecwa_3001 NC_013421.1 3264246 3265232 R PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: eca:ECA1458 myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein complement(3264246..3265232) Pectobacterium wasabiae WPP163 8531407 YP_003260355.1 CDS Pecwa_3002 NC_013421.1 3265996 3267927 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: eca:ECA1457 thiamine pyrophosphate-dependent protein; thiamine pyrophosphate domain-containing TPP-binding protein complement(3265996..3267927) Pectobacterium wasabiae WPP163 8531408 YP_003260356.1 CDS Pecwa_3003 NC_013421.1 3268284 3269795 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: eca:ECA1456 aldehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(3268284..3269795) Pectobacterium wasabiae WPP163 8531409 YP_003260357.1 CDS Pecwa_3004 NC_013421.1 3270128 3270985 D PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: pct:PC1_1333 RpiR family transcriptional regulator; RpiR family transcriptional regulator 3270128..3270985 Pectobacterium wasabiae WPP163 8531410 YP_003260358.1 CDS Pecwa_3005 NC_013421.1 3271033 3271338 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: eca:ECA1454 hypothetical protein; antibiotic biosynthesis monooxygenase 3271033..3271338 Pectobacterium wasabiae WPP163 8531411 YP_003260359.1 CDS Pecwa_3006 NC_013421.1 3271629 3272768 D PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_1331 extracellular solute-binding protein family 1; extracellular solute-binding protein 3271629..3272768 Pectobacterium wasabiae WPP163 8531412 YP_003260360.1 CDS Pecwa_3007 NC_013421.1 3272911 3273972 R KEGG: eca:ECA1453 signaling membrane protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3272911..3273972) Pectobacterium wasabiae WPP163 8531413 YP_003260361.1 CDS Pecwa_3008 NC_013421.1 3274776 3276398 R PFAM: peptidase S53 propeptide; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: eca:ECA1450 protease; peptidase S53 propeptide complement(3274776..3276398) Pectobacterium wasabiae WPP163 8531414 YP_003260362.1 CDS Pecwa_3009 NC_013421.1 3276418 3276975 R catalyzes the interconversion of chorismate to prephenate; chorismate mutase complement(3276418..3276975) Pectobacterium wasabiae WPP163 8531415 YP_003260363.1 CDS Pecwa_3010 NC_013421.1 3277367 3279502 R PFAM: protein of unknown function DUF940 membrane lipoprotein KEGG: eca:ECA1448 hypothetical protein; hypothetical protein complement(3277367..3279502) Pectobacterium wasabiae WPP163 8531416 YP_003260364.1 CDS Pecwa_3011 NC_013421.1 3279499 3280281 R PFAM: protein of unknown function DUF1017; KEGG: pct:PC1_1323 hypothetical protein; hypothetical protein complement(3279499..3280281) Pectobacterium wasabiae WPP163 8531417 YP_003260365.1 CDS Pecwa_3012 NC_013421.1 3280291 3280968 R KEGG: pct:PC1_1322 lipoprotein; lipoprotein complement(3280291..3280968) Pectobacterium wasabiae WPP163 8531418 YP_003260366.1 CDS Pecwa_3013 NC_013421.1 3281044 3281325 R KEGG: pct:PC1_1321 hypothetical protein; hypothetical protein complement(3281044..3281325) Pectobacterium wasabiae WPP163 8531419 YP_003260367.1 CDS Pecwa_3014 NC_013421.1 3281779 3283185 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(3281779..3283185) Pectobacterium wasabiae WPP163 8531420 YP_003260368.1 CDS Pecwa_3015 NC_013421.1 3283417 3284313 R PFAM: nucleotidyl transferase; KEGG: eca:ECA1443 UTP--glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase complement(3283417..3284313) Pectobacterium wasabiae WPP163 8531421 YP_003260369.1 CDS Pecwa_3016 NC_013421.1 3284548 3285417 D KEGG: eca:ECA1442 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 3284548..3285417 Pectobacterium wasabiae WPP163 8531422 YP_003260370.1 CDS Pecwa_3017 NC_013421.1 3285419 3285955 D KEGG: eca:ECA1441 dTDP-6-deoxy-D-glucose-3,5 epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 3285419..3285955 Pectobacterium wasabiae WPP163 8531423 YP_003260371.1 CDS Pecwa_3018 NC_013421.1 3285952 3286797 D TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA1440 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 3285952..3286797 Pectobacterium wasabiae WPP163 8531424 YP_003260372.1 CDS Pecwa_3019 NC_013421.1 3286839 3287984 R KEGG: kpu:KP1_3695 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; UDP-galactopyranose mutase complement(3286839..3287984) Pectobacterium wasabiae WPP163 8531425 YP_003260373.1 CDS Pecwa_3021 NC_013421.1 3289077 3290420 R KEGG: asu:Asuc_0818 hypothetical protein; hypothetical protein complement(3289077..3290420) Pectobacterium wasabiae WPP163 8531427 YP_003260374.1 CDS Pecwa_3022 NC_013421.1 3290691 3291446 R KEGG: cko:CKO_00752 hypothetical protein; hypothetical protein complement(3290691..3291446) Pectobacterium wasabiae WPP163 8531428 YP_003260375.1 CDS Pecwa_3023 NC_013421.1 3291463 3292434 R PFAM: glycosyl transferase family 2; KEGG: dps:DP0013 glycosyltransferase involved capsular polysaccharide biosynthesis; family 2 glycosyl transferase complement(3291463..3292434) Pectobacterium wasabiae WPP163 8531429 YP_003260376.1 CDS Pecwa_3024 NC_013421.1 3292442 3293512 R PFAM: glycosyl transferase group 1; KEGG: pay:PAU_00363 lipopolysaccharide 1,6-galactosyltransferase; group 1 glycosyl transferase complement(3292442..3293512) Pectobacterium wasabiae WPP163 8531430 YP_003260377.1 CDS Pecwa_3025 NC_013421.1 3293571 3294557 R PFAM: glycosyltransferase family 52; KEGG: abm:ABSDF0075 polysaccharide biosynthesis protein; glycosyl transferase family protein complement(3293571..3294557) Pectobacterium wasabiae WPP163 8531431 YP_003260378.1 CDS Pecwa_3026 NC_013421.1 3294544 3295764 R PFAM: polysaccharide biosynthesis protein; KEGG: pmu:PM0507 hypothetical protein; polysaccharide biosynthesis protein complement(3294544..3295764) Pectobacterium wasabiae WPP163 8531432 YP_003260379.1 CDS Pecwa_3027 NC_013421.1 3295770 3296819 R KEGG: aeh:Mlg_2327 N-acetylneuraminate synthase; TIGRFAM: pseudaminic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; pseudaminic acid synthase complement(3295770..3296819) Pectobacterium wasabiae WPP163 8531433 YP_003260380.1 CDS Pecwa_3028 NC_013421.1 3296823 3297341 R TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; PFAM: GCN5-related N-acetyltransferase; KEGG: abc:ACICU_00079 acetyltransferase; pseudaminic acid biosynthesis N-acetyl transferase complement(3296823..3297341) Pectobacterium wasabiae WPP163 8531434 YP_003260381.1 CDS Pecwa_3029 NC_013421.1 3297338 3298441 R TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; KEGG: aeh:Mlg_2325 polysaccharide biosynthesis protein; pseudaminic acid biosynthesis-associated protein PseG complement(3297338..3298441) Pectobacterium wasabiae WPP163 8531435 YP_003260382.1 CDS Pecwa_3030 NC_013421.1 3298434 3299132 R TIGRFAM: pseudaminic acid CMP-transferase; PFAM: acylneuraminate cytidylyltransferase; KEGG: aeh:Mlg_2324 acylneuraminate cytidylyltransferase; pseudaminic acid CMP-transferase complement(3298434..3299132) Pectobacterium wasabiae WPP163 8531436 YP_003260383.1 CDS Pecwa_3031 NC_013421.1 3299129 3300292 R TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: par:Psyc_0654 DegT/DnrJ/EryC1/StrS aminotransferase; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase complement(3299129..3300292) Pectobacterium wasabiae WPP163 8531437 YP_003260384.1 CDS Pecwa_3032 NC_013421.1 3300294 3301292 R TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: bpt:Bpet2302 sugar nucleotide epimerase / oxidoreductase; UDP-N-acetylglucosamine 4,6-dehydratase complement(3300294..3301292) Pectobacterium wasabiae WPP163 8531438 YP_003260385.1 CDS Pecwa_3033 NC_013421.1 3301371 3302807 R KEGG: eca:ECA1420 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase, WbaP complement(3301371..3302807) Pectobacterium wasabiae WPP163 8531439 YP_003260386.1 CDS Pecwa_3034 NC_013421.1 3303061 3305232 R Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); tyrosine kinase complement(3303061..3305232) Pectobacterium wasabiae WPP163 8531440 YP_003260387.1 CDS Pecwa_3035 NC_013421.1 3305248 3305682 R PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: pct:PC1_1297 protein tyrosine phosphatase; protein tyrosine phosphatase complement(3305248..3305682) Pectobacterium wasabiae WPP163 8531441 YP_003260388.1 CDS Pecwa_3036 NC_013421.1 3305691 3306827 R PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: eca:ECA1417 polysaccharide export protein; polysaccharide export protein complement(3305691..3306827) Pectobacterium wasabiae WPP163 8531442 YP_003260389.1 CDS Pecwa_3037 NC_013421.1 3306974 3308053 R TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase, family 4, conserved region; KEGG: pct:PC1_1295 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase complement(3306974..3308053) Pectobacterium wasabiae WPP163 8531443 YP_003260390.1 CDS Pecwa_3038 NC_013421.1 3308508 3310241 D PFAM: integral membrane protein TerC; transporter-associated region; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: eca:ECA1415 hypothetical protein; integral membrane protein TerC 3308508..3310241 Pectobacterium wasabiae WPP163 8531444 YP_003260391.1 CDS dcuC NC_013421.1 3310325 3311677 R responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC complement(3310325..3311677) Pectobacterium wasabiae WPP163 8531445 YP_003260392.1 CDS Pecwa_3040 NC_013421.1 3311939 3313774 R YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; assembly protein complement(3311939..3313774) Pectobacterium wasabiae WPP163 8531446 YP_003260393.1 CDS dcd NC_013421.1 3313838 3314419 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(3313838..3314419) Pectobacterium wasabiae WPP163 8531447 YP_003260394.1 CDS Pecwa_3042 NC_013421.1 3314526 3315167 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(3314526..3315167) Pectobacterium wasabiae WPP163 8531448 YP_003260395.1 CDS Pecwa_3043 NC_013421.1 3315356 3316465 R PFAM: ATPase-like, ParA/MinD; KEGG: pct:PC1_1288 ATPase; ATPase complement(3315356..3316465) Pectobacterium wasabiae WPP163 8531449 YP_003260396.1 CDS metG NC_013421.1 3316688 3318718 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 3316688..3318718 Pectobacterium wasabiae WPP163 8531450 YP_003260397.1 CDS Pecwa_3045 NC_013421.1 3318999 3322046 D TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: eca:ECA1408 formate dehydrogenase, nitrate-inducible, major subunit; formate dehydrogenase subunit alpha 3318999..3322046 Pectobacterium wasabiae WPP163 8531451 YP_003260398.1 CDS Pecwa_3046 NC_013421.1 3322059 3322967 D TIGRFAM: formate dehydrogenase subunit beta; PFAM: formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA1407 formate dehydrogenase, nitrate-inducible, iron-sulfur subunit; formate dehydrogenase subunit beta 3322059..3322967 Pectobacterium wasabiae WPP163 8531452 YP_003260399.1 CDS Pecwa_3047 NC_013421.1 3322960 3323595 D nitrate-inducible, cytochrome b556(fdn) component of formate dehydrogenase; formate dehydrogenase-N subunit gamma 3322960..3323595 Pectobacterium wasabiae WPP163 8531453 YP_003260400.1 CDS Pecwa_3048 NC_013421.1 3323861 3324937 D KEGG: pct:PC1_1283 hypothetical protein; hypothetical protein 3323861..3324937 Pectobacterium wasabiae WPP163 8531454 YP_003260401.1 CDS Pecwa_3049 NC_013421.1 3324952 3326202 D KEGG: pct:PC1_1282 hypothetical protein; hypothetical protein 3324952..3326202 Pectobacterium wasabiae WPP163 8531455 YP_003260402.1 CDS Pecwa_3050 NC_013421.1 3326334 3327710 D KEGG: pct:PC1_1281 hypothetical protein; hypothetical protein 3326334..3327710 Pectobacterium wasabiae WPP163 8531456 YP_003260403.1 CDS Pecwa_3051 NC_013421.1 3327747 3328745 R catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase complement(3327747..3328745) Pectobacterium wasabiae WPP163 8531457 YP_003260404.1 CDS Pecwa_3053 NC_013421.1 3329791 3330192 D PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: eca:ECA1665 DNA-binding protein Hns; histone family protein nucleoid-structuring protein H-NS 3329791..3330192 Pectobacterium wasabiae WPP163 8531459 YP_003260405.1 CDS Pecwa_3054 NC_013421.1 3330660 3331136 R KEGG: gur:Gura_2880 hypothetical protein; hypothetical protein complement(3330660..3331136) Pectobacterium wasabiae WPP163 8531460 YP_003260406.1 CDS Pecwa_3056 NC_013421.1 3331831 3332652 D YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily; phosphotransferase 3331831..3332652 Pectobacterium wasabiae WPP163 8531463 YP_003260407.1 CDS glk NC_013421.1 3332722 3333687 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(3332722..3333687) Pectobacterium wasabiae WPP163 8531464 YP_003260408.1 CDS Pecwa_3058 NC_013421.1 3333875 3335119 D PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: eca:ECA1400 nucleoside H+ symporter; nucleoside:H symporter 3333875..3335119 Pectobacterium wasabiae WPP163 8531465 YP_003260409.1 CDS Pecwa_3059 NC_013421.1 3335256 3336326 D PFAM: xylose isomerase; AP endonuclease 2 domain protein; KEGG: eca:ECA1399 hypothetical protein; xylose isomerase 3335256..3336326 Pectobacterium wasabiae WPP163 8531466 YP_003260410.1 CDS Pecwa_3060 NC_013421.1 3336323 3337474 D PFAM: oxidoreductase domain protein; semialdehyde dehydrogenase NAD - binding; homoserine dehydrogenase NAD-binding; oxidoreductase domain; KEGG: eca:ECA1398 oxidoreductase; oxidoreductase domain-containing protein 3336323..3337474 Pectobacterium wasabiae WPP163 8531467 YP_003260411.1 CDS Pecwa_3061 NC_013421.1 3337589 3338569 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pct:PC1_1273 LacI family transcriptional regulator; LacI family transcriptional regulator 3337589..3338569 Pectobacterium wasabiae WPP163 8531468 YP_003260412.1 CDS Pecwa_3062 NC_013421.1 3338648 3339511 R PFAM: xylose isomerase; KEGG: eca:ECA1396 hypothetical protein; xylose isomerase complement(3338648..3339511) Pectobacterium wasabiae WPP163 8531469 YP_003260413.1 CDS modC NC_013421.1 3339750 3340808 R Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein complement(3339750..3340808) Pectobacterium wasabiae WPP163 8531470 YP_003260414.1 CDS modB NC_013421.1 3340808 3341494 R part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease complement(3340808..3341494) Pectobacterium wasabiae WPP163 8531471 YP_003260415.1 CDS modA NC_013421.1 3341497 3342267 R with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein complement(3341497..3342267) Pectobacterium wasabiae WPP163 8531472 YP_003260416.1 CDS Pecwa_3066 NC_013421.1 3342413 3342568 R KEGG: pct:PC1_1268 hypothetical protein; hypothetical protein complement(3342413..3342568) Pectobacterium wasabiae WPP163 8531473 YP_003260417.1 CDS Pecwa_3067 NC_013421.1 3342764 3343555 D represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; ModE family transcriptional regulator 3342764..3343555 Pectobacterium wasabiae WPP163 8531474 YP_003260418.1 CDS Pecwa_3068 NC_013421.1 3343596 3345071 D contains 2 ATP-binding cassettes; involved in the transport of molybdenum; molybdenum transport ATP-binding protein ModF 3343596..3345071 Pectobacterium wasabiae WPP163 8531475 YP_003260419.1 CDS Pecwa_3069 NC_013421.1 3345270 3346289 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: pct:PC1_1265 UDP-glucose 4-epimerase; UDP-galactose-4-epimerase 3345270..3346289 Pectobacterium wasabiae WPP163 8531476 YP_003260420.1 CDS galM NC_013421.1 3346549 3347595 D catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose; aldose 1-epimerase 3346549..3347595 Pectobacterium wasabiae WPP163 8531477 YP_003260421.1 CDS Pecwa_3071 NC_013421.1 3347747 3348199 D KEGG: pct:PC1_1263 hypothetical protein; hypothetical protein 3347747..3348199 Pectobacterium wasabiae WPP163 8531478 YP_003260422.1 CDS Pecwa_3072 NC_013421.1 3348275 3348625 D KEGG: eca:ECA1386 hypothetical protein; hypothetical protein 3348275..3348625 Pectobacterium wasabiae WPP163 8531479 YP_003260423.1 CDS Pecwa_3073 NC_013421.1 3348638 3349897 D PFAM: outer membrane efflux protein; KEGG: eca:ECA1385 hypothetical protein; outer membrane efflux protein 3348638..3349897 Pectobacterium wasabiae WPP163 8531480 YP_003260424.1 CDS Pecwa_3074 NC_013421.1 3349894 3351387 D TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: eca:ECA1384 copper efflux system protein; RND family efflux transporter MFP subunit 3349894..3351387 Pectobacterium wasabiae WPP163 8531481 YP_003260425.1 CDS Pecwa_3075 NC_013421.1 3351384 3354521 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: eca:ECA1383 cation efflux system protein; CzcA family heavy metal efflux pump 3351384..3354521 Pectobacterium wasabiae WPP163 8531482 YP_003260426.1 CDS gpmA NC_013421.1 3354659 3355411 D 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 3354659..3355411 Pectobacterium wasabiae WPP163 8531483 YP_003260427.1 CDS Pecwa_3078 NC_013421.1 3356590 3357141 D PFAM: NAD(P)H dehydrogenase (quinone); DoxX family protein; KEGG: ara:Arad_7382 (acyl-carrier-protein) phosphodiesterase protein; NAD(P)H dehydrogenase (quinone) 3356590..3357141 Pectobacterium wasabiae WPP163 8531485 YP_003260428.1 CDS Pecwa_3079 NC_013421.1 3357256 3358311 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3357256..3358311) Pectobacterium wasabiae WPP163 8531486 YP_003260429.1 CDS Pecwa_3080 NC_013421.1 3358607 3359539 D involved in zinc efflux across the cytoplasmic membrane; zinc transporter ZitB 3358607..3359539 Pectobacterium wasabiae WPP163 8531487 YP_003260430.1 CDS Pecwa_3081 NC_013421.1 3359547 3360272 R TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: eca:ECA1379 nicotinamide mononucleotide transporter; nicotinamide mononucleotide transporter PnuC complement(3359547..3360272) Pectobacterium wasabiae WPP163 8531488 YP_003260431.1 CDS Pecwa_3082 NC_013421.1 3360331 3361392 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(3360331..3361392) Pectobacterium wasabiae WPP163 8531489 YP_003260432.1 CDS Pecwa_3083 NC_013421.1 3361608 3362006 D KEGG: eca:ECA1377 hypothetical protein; hypothetical protein 3361608..3362006 Pectobacterium wasabiae WPP163 8531490 YP_003260433.1 CDS Pecwa_3084 NC_013421.1 3362021 3362737 R PFAM: protein of unknown function DUF554; KEGG: pct:PC1_1252 hypothetical protein; hypothetical protein complement(3362021..3362737) Pectobacterium wasabiae WPP163 8531491 YP_003260434.1 CDS Pecwa_3085 NC_013421.1 3363691 3364467 R periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; tol-pal system protein YbgF complement(3363691..3364467) Pectobacterium wasabiae WPP163 8531494 YP_003260435.1 CDS Pecwa_3086 NC_013421.1 3364477 3364986 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: pct:PC1_1250 peptidoglycan-associated lipoprotein; peptidoglycan-associated outer membrane lipoprotein complement(3364477..3364986) Pectobacterium wasabiae WPP163 8531495 YP_003260436.1 CDS tolB NC_013421.1 3365027 3366319 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(3365027..3366319) Pectobacterium wasabiae WPP163 8531496 YP_003260437.1 CDS tolA NC_013421.1 3366458 3367618 R inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA complement(3366458..3367618) Pectobacterium wasabiae WPP163 8531497 YP_003260438.1 CDS Pecwa_3089 NC_013421.1 3367683 3368108 R membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR complement(3367683..3368108) Pectobacterium wasabiae WPP163 8531498 YP_003260439.1 CDS Pecwa_3090 NC_013421.1 3368121 3368807 R membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ complement(3368121..3368807) Pectobacterium wasabiae WPP163 8531499 YP_003260440.1 CDS Pecwa_3091 NC_013421.1 3368804 3369208 R catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase YbgC complement(3368804..3369208) Pectobacterium wasabiae WPP163 8531500 YP_003260441.1 CDS Pecwa_3092 NC_013421.1 3369342 3369635 R TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE; KEGG: eca:ECA1368 hypothetical protein; hypothetical protein complement(3369342..3369635) Pectobacterium wasabiae WPP163 8531501 YP_003260442.1 CDS Pecwa_3093 NC_013421.1 3369632 3369748 R TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: eca:ECA1367 hypothetical protein; cyd operon protein YbgT complement(3369632..3369748) Pectobacterium wasabiae WPP163 8531502 YP_003260443.1 CDS Pecwa_3094 NC_013421.1 3369765 3370904 R TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: pct:PC1_1242 cytochrome d ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II complement(3369765..3370904) Pectobacterium wasabiae WPP163 8531503 YP_003260444.1 CDS Pecwa_3095 NC_013421.1 3370918 3372486 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: pct:PC1_1241 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(3370918..3372486) Pectobacterium wasabiae WPP163 8531504 YP_003260445.1 CDS Pecwa_3096 NC_013421.1 3373199 3374368 R PFAM: hypothetical protein; SMART: Tetratricopeptide repeat; KEGG: pct:PC1_1240 hypothetical protein; hypothetical protein complement(3373199..3374368) Pectobacterium wasabiae WPP163 8531505 YP_003260446.1 CDS Pecwa_3097 NC_013421.1 3374596 3375468 R Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha complement(3374596..3375468) Pectobacterium wasabiae WPP163 8531506 YP_003260447.1 CDS sucC NC_013421.1 3375468 3376634 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(3375468..3376634) Pectobacterium wasabiae WPP163 8531507 YP_003260448.1 CDS Pecwa_3099 NC_013421.1 3376844 3378070 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(3376844..3378070) Pectobacterium wasabiae WPP163 8531508 YP_003260449.1 CDS sucA NC_013421.1 3378086 3380893 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(3378086..3380893) Pectobacterium wasabiae WPP163 8531509 YP_003260450.1 CDS sdhB NC_013421.1 3381169 3381885 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(3381169..3381885) Pectobacterium wasabiae WPP163 8531510 YP_003260451.1 CDS sdhA NC_013421.1 3381902 3383668 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(3381902..3383668) Pectobacterium wasabiae WPP163 8531511 YP_003260452.1 CDS sdhD NC_013421.1 3383668 3384015 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: pct:PC1_1233 succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase cytochrome b556 small membrane subunit complement(3383668..3384015) Pectobacterium wasabiae WPP163 8531512 YP_003260453.1 CDS sdhC NC_013421.1 3384009 3384398 R TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: pct:PC1_1232 succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase cytochrome b556 large membrane subunit complement(3384009..3384398) Pectobacterium wasabiae WPP163 8531513 YP_003260454.1 CDS gltA NC_013421.1 3385065 3386351 D type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 3385065..3386351 Pectobacterium wasabiae WPP163 8531514 YP_003260455.1 CDS Pecwa_3106 NC_013421.1 3386426 3387217 R 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; endonuclease VIII complement(3386426..3387217) Pectobacterium wasabiae WPP163 8531515 YP_003260456.1 CDS Pecwa_3107 NC_013421.1 3387267 3387914 R KEGG: pct:PC1_1229 pyrrolidone-carboxylate peptidase; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase complement(3387267..3387914) Pectobacterium wasabiae WPP163 8531516 YP_003260457.1 CDS Pecwa_3108 NC_013421.1 3387945 3388682 R PFAM: LamB/YcsF family protein; KEGG: eca:ECA1353 LamB/YcsF family protein; LamB/YcsF family protein complement(3387945..3388682) Pectobacterium wasabiae WPP163 8531517 YP_003260458.1 CDS Pecwa_3109 NC_013421.1 3388672 3389616 R KEGG: eca:ECA1352 allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; SMART: allophanate hydrolase subunit 2; urea amidolyase-like protein complement(3388672..3389616) Pectobacterium wasabiae WPP163 8531518 YP_003260459.1 CDS Pecwa_3110 NC_013421.1 3389610 3390266 R PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1; KEGG: eca:ECA1351 allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 complement(3389610..3390266) Pectobacterium wasabiae WPP163 8531519 YP_003260460.1 CDS Pecwa_3111 NC_013421.1 3390423 3391166 R PFAM: protein of unknown function DUF34; KEGG: eca:ECA1350 hydrolase-oxidase; hydrolase-oxidase complement(3390423..3391166) Pectobacterium wasabiae WPP163 8531520 YP_003260461.1 CDS Pecwa_3112 NC_013421.1 3391159 3392637 R UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase complement(3391159..3392637) Pectobacterium wasabiae WPP163 8531521 YP_003260462.1 CDS Pecwa_3113 NC_013421.1 3392659 3393618 R PFAM: protein of unknown function DUF1722; protein of unknown function DUF523; KEGG: pct:PC1_1223 hypothetical protein; hypothetical protein complement(3392659..3393618) Pectobacterium wasabiae WPP163 8531522 YP_003260463.1 CDS Pecwa_3114 NC_013421.1 3393913 3394119 R PFAM: protein of unknown function DUF2517; KEGG: eca:ECA1344 hypothetical protein; hypothetical protein complement(3393913..3394119) Pectobacterium wasabiae WPP163 8531523 YP_003260464.1 CDS Pecwa_3115 NC_013421.1 3394732 3395238 R KEGG: bbt:BBta_3107 hypothetical protein; hypothetical protein complement(3394732..3395238) Pectobacterium wasabiae WPP163 8531524 YP_003260465.1 CDS Pecwa_3116 NC_013421.1 3395367 3395918 R KEGG: plu:plu0351 hypothetical protein; hypothetical protein complement(3395367..3395918) Pectobacterium wasabiae WPP163 8531525 YP_003260466.1 CDS Pecwa_3117 NC_013421.1 3396600 3397214 D PFAM: transcriptional regulator; KEGG: eca:ECA1338 DNA-binding transcriptional activator KdpE; two component transcriptional regulator, winged helix family 3396600..3397214 Pectobacterium wasabiae WPP163 8531526 YP_003260467.1 CDS Pecwa_3118 NC_013421.1 3397297 3397725 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: pct:PC1_1213 hypothetical protein; hypothetical protein 3397297..3397725 Pectobacterium wasabiae WPP163 8531527 YP_003260468.1 CDS Pecwa_3119 NC_013421.1 3397783 3399426 R catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase complement(3397783..3399426) Pectobacterium wasabiae WPP163 8531528 YP_003260469.1 CDS Pecwa_3120 NC_013421.1 3399553 3400089 R negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA complement(3399553..3400089) Pectobacterium wasabiae WPP163 8531529 YP_003260470.1 CDS Pecwa_3121 NC_013421.1 3400362 3401141 D PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: pct:PC1_1210 alpha/beta hydrolase; hypothetical protein 3400362..3401141 Pectobacterium wasabiae WPP163 8531530 YP_003260471.1 CDS Pecwa_3122 NC_013421.1 3401434 3401715 D PFAM: CopG domain protein DNA-binding domain protein; KEGG: eca:ECA1333 LexA regulated protein; LexA regulated protein 3401434..3401715 Pectobacterium wasabiae WPP163 8531531 YP_003260472.1 CDS Pecwa_3123 NC_013421.1 3401867 3403534 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: pct:PC1_1208 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3401867..3403534) Pectobacterium wasabiae WPP163 8531532 YP_003260473.1 CDS Pecwa_3124 NC_013421.1 3404423 3404950 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 3404423..3404950 Pectobacterium wasabiae WPP163 8531533 YP_003260474.1 CDS fur NC_013421.1 3405280 3405729 D negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator 3405280..3405729 Pectobacterium wasabiae WPP163 8531534 YP_003260475.1 CDS Pecwa_3126 NC_013421.1 3405793 3407451 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(3405793..3407451) Pectobacterium wasabiae WPP163 8531535 YP_003260476.1 CDS Pecwa_3127 NC_013421.1 3407617 3409113 R TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: pct:PC1_1204 PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system N-acetylglucosamine-specific transporter subunit IIBC complement(3407617..3409113) Pectobacterium wasabiae WPP163 8531536 YP_003260477.1 CDS nagB NC_013421.1 3409473 3410273 D catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 3409473..3410273 Pectobacterium wasabiae WPP163 8531537 YP_003260478.1 CDS nagA NC_013421.1 3410293 3411438 D catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase 3410293..3411438 Pectobacterium wasabiae WPP163 8531538 YP_003260479.1 CDS Pecwa_3130 NC_013421.1 3411530 3412753 D PFAM: ROK family protein; KEGG: pct:PC1_1201 ROK family protein; ROK family protein 3411530..3412753 Pectobacterium wasabiae WPP163 8531539 YP_003260480.1 CDS asnB NC_013421.1 3412957 3414621 D functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 3412957..3414621 Pectobacterium wasabiae WPP163 8531540 YP_003260481.1 CDS Pecwa_3132 NC_013421.1 3415676 3416290 D KEGG: pct:PC1_1199 hypothetical protein; hypothetical protein 3415676..3416290 Pectobacterium wasabiae WPP163 8531547 YP_003260482.1 CDS ubiF NC_013421.1 3416314 3417480 R catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(3416314..3417480) Pectobacterium wasabiae WPP163 8531548 YP_003260483.1 CDS Pecwa_3134 NC_013421.1 3417711 3419135 D KEGG: pct:PC1_1197 tRNA-i(6)A37 thiotransferase enzyme MiaB; TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase enzyme MiaB 3417711..3419135 Pectobacterium wasabiae WPP163 8531549 YP_003260484.1 CDS Pecwa_3135 NC_013421.1 3419554 3420612 D PFAM: PhoH family protein; KEGG: pct:PC1_1196 PhoH family protein; PhoH family protein 3419554..3420612 Pectobacterium wasabiae WPP163 8531550 YP_003260485.1 CDS Pecwa_3136 NC_013421.1 3420609 3421088 D PFAM: protein of unknown function UPF0054; KEGG: pct:PC1_1195 hypothetical protein; metalloprotease 3420609..3421088 Pectobacterium wasabiae WPP163 8531551 YP_003260486.1 CDS Pecwa_3137 NC_013421.1 3421384 3422262 D PFAM: transporter-associated region; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: pct:PC1_1194 transporter-associated region; transporter-associated protein 3421384..3422262 Pectobacterium wasabiae WPP163 8531552 YP_003260487.1 CDS lnt NC_013421.1 3422270 3423799 D transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 3422270..3423799 Pectobacterium wasabiae WPP163 8531553 YP_003260488.1 CDS Pecwa_3139 NC_013421.1 3424231 3425127 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pct:PC1_1192 extracellular solute-binding protein family 3; glutamate and aspartate transporter subunit 3424231..3425127 Pectobacterium wasabiae WPP163 8531554 YP_003260489.1 CDS Pecwa_3140 NC_013421.1 3425345 3426085 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA1313 glutamate/aspartate transporter permease protein; polar amino acid ABC transporter inner membrane protein 3425345..3426085 Pectobacterium wasabiae WPP163 8531555 YP_003260490.1 CDS Pecwa_3141 NC_013421.1 3426089 3426763 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_1190 polar amino acid ABC transporter inner membrane protein; polar amino acid ABC transporter inner membrane protein 3426089..3426763 Pectobacterium wasabiae WPP163 8531556 YP_003260491.1 CDS Pecwa_3142 NC_013421.1 3426763 3427488 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_1189 ABC transporter; ABC transporter 3426763..3427488 Pectobacterium wasabiae WPP163 8531557 YP_003260492.1 CDS Pecwa_3143 NC_013421.1 3427537 3428019 R PFAM: protein of unknown function DUF1451; KEGG: pct:PC1_1188 hypothetical protein; hypothetical protein complement(3427537..3428019) Pectobacterium wasabiae WPP163 8531558 YP_003260493.1 CDS leuS NC_013421.1 3428328 3430910 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3428328..3430910 Pectobacterium wasabiae WPP163 8531559 YP_003260494.1 CDS Pecwa_3145 NC_013421.1 3430925 3431479 D rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB 3430925..3431479 Pectobacterium wasabiae WPP163 8531560 YP_003260495.1 CDS holA NC_013421.1 3431476 3432501 D required for the assembly and function of the DNAX complex which is required for the assembly of the subunit beta onto primed DNA; DNA polymerase III subunit delta 3431476..3432501 Pectobacterium wasabiae WPP163 8531561 YP_003260496.1 CDS nadD NC_013421.1 3432468 3433157 D transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 3432468..3433157 Pectobacterium wasabiae WPP163 8531562 YP_003260497.1 CDS Pecwa_3148 NC_013421.1 3433352 3433669 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: eca:ECA1305 hypothetical protein; hypothetical protein 3433352..3433669 Pectobacterium wasabiae WPP163 8531563 YP_003260498.1 CDS Pecwa_3149 NC_013421.1 3433671 3434141 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3433671..3434141 Pectobacterium wasabiae WPP163 8531564 YP_003260499.1 CDS Pecwa_3150 NC_013421.1 3434175 3436079 D KEGG: eca:ECA1303 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 3434175..3436079 Pectobacterium wasabiae WPP163 8531565 YP_003260500.1 CDS Pecwa_3151 NC_013421.1 3436089 3437201 D TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: eca:ECA1302 cell wall shape-determining protein; cell wall shape-determining protein 3436089..3437201 Pectobacterium wasabiae WPP163 8531566 YP_003260501.1 CDS Pecwa_3152 NC_013421.1 3437215 3438327 D TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; sporulation domain protein; KEGG: pct:PC1_1179 lipoprotein A; lipoprotein A 3437215..3438327 Pectobacterium wasabiae WPP163 8531567 YP_003260502.1 CDS Pecwa_3153 NC_013421.1 3438493 3439704 D penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase 3438493..3439704 Pectobacterium wasabiae WPP163 8531568 YP_003260503.1 CDS Pecwa_3154 NC_013421.1 3439872 3440135 D PFAM: protein of unknown function DUF493; KEGG: pct:PC1_1177 hypothetical protein; hypothetical protein 3439872..3440135 Pectobacterium wasabiae WPP163 8531569 YP_003260504.1 CDS Pecwa_3155 NC_013421.1 3440340 3441023 D lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system protein H; lipoate-protein ligase B 3440340..3441023 Pectobacterium wasabiae WPP163 8531570 YP_003260505.1 CDS Pecwa_3156 NC_013421.1 3441251 3442216 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3441251..3442216 Pectobacterium wasabiae WPP163 8531571 YP_003260506.1 CDS tatE NC_013421.1 3442299 3442496 R TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(3442299..3442496) Pectobacterium wasabiae WPP163 8531572 YP_003260507.1 CDS Pecwa_3158 NC_013421.1 3442973 3443356 D TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: eca:ECA1295 hypothetical protein; CrcB protein 3442973..3443356 Pectobacterium wasabiae WPP163 8531573 YP_003260508.1 CDS cspE NC_013421.1 3443420 3443629 R member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE complement(3443420..3443629) Pectobacterium wasabiae WPP163 8531574 YP_003260509.1 CDS Pecwa_3160 NC_013421.1 3443848 3444558 D TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: eca:ECA1293 aspartate/glutamate racemase; aspartate racemase 3443848..3444558 Pectobacterium wasabiae WPP163 8531575 YP_003260510.1 CDS Pecwa_3161 NC_013421.1 3445015 3445392 D PFAM: arsenate reductase; KEGG: eca:ECA1292 hypothetical protein; hypothetical protein 3445015..3445392 Pectobacterium wasabiae WPP163 8531576 YP_003260511.1 CDS Pecwa_3162 NC_013421.1 3445394 3446521 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3445394..3446521 Pectobacterium wasabiae WPP163 8531577 YP_003260512.1 CDS Pecwa_3163 NC_013421.1 3446518 3447192 D PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: pct:PC1_1168 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 3446518..3447192 Pectobacterium wasabiae WPP163 8531578 YP_003260513.1 CDS Pecwa_3164 NC_013421.1 3447196 3447384 D KEGG: eca:ECA1289 hypothetical protein; hypothetical protein 3447196..3447384 Pectobacterium wasabiae WPP163 8531579 YP_003260514.1 CDS Pecwa_3165 NC_013421.1 3447447 3448346 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1288 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3447447..3448346) Pectobacterium wasabiae WPP163 8531580 YP_003260515.1 CDS Pecwa_3166 NC_013421.1 3448953 3450275 D TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: citrate transporter; TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: eca:ECA1287 Mg(2+)/citrate complex transporter; CitMHS family citrate/H+ symporter 3448953..3450275 Pectobacterium wasabiae WPP163 8531581 YP_003260516.1 CDS Pecwa_3167 NC_013421.1 3450337 3451677 D PFAM: protein of unknown function DUF1446; KEGG: eca:ECA1286 hypothetical protein; hypothetical protein 3450337..3451677 Pectobacterium wasabiae WPP163 8531582 YP_003260517.1 CDS Pecwa_3168 NC_013421.1 3451677 3451976 D KEGG: eca:ECA1285 hypothetical protein; hypothetical protein 3451677..3451976 Pectobacterium wasabiae WPP163 8531583 YP_003260518.1 CDS Pecwa_3169 NC_013421.1 3452124 3452780 D KEGG: pct:PC1_1162 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, subunit alpha; PFAM: coenzyme A transferase; acetyl-CoA:acetoacetyl-CoA transferase subunit alpha 3452124..3452780 Pectobacterium wasabiae WPP163 8531584 YP_003260519.1 CDS Pecwa_3170 NC_013421.1 3452780 3453427 D KEGG: eca:ECA1283 acetate CoA-transferase beta subunit; TIGRFAM: 3-oxoacid CoA-transferase subunit beta; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 3452780..3453427 Pectobacterium wasabiae WPP163 8531585 YP_003260520.1 CDS Pecwa_3171 NC_013421.1 3453439 3454617 D KEGG: pct:PC1_1160 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase; acetyl-CoA acetyltransferase 3453439..3454617 Pectobacterium wasabiae WPP163 8531586 YP_003260521.1 CDS Pecwa_3172 NC_013421.1 3454929 3456599 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1281 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3454929..3456599) Pectobacterium wasabiae WPP163 8531587 YP_003260522.1 CDS Pecwa_3173 NC_013421.1 3456937 3457554 R Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YpfH complement(3456937..3457554) Pectobacterium wasabiae WPP163 8531588 YP_003260523.1 CDS Pecwa_3174 NC_013421.1 3457719 3457946 R PFAM: protein of unknown function DUF1272; KEGG: pct:PC1_1157 hypothetical protein; hypothetical protein complement(3457719..3457946) Pectobacterium wasabiae WPP163 8531589 YP_003260524.1 CDS Pecwa_3175 NC_013421.1 3458400 3460505 R PFAM: protein of unknown function DUF699 ATPase ; GCN5-related N-acetyltransferase; KEGG: eca:ECA1266 acetyltransferase; hypothetical protein complement(3458400..3460505) Pectobacterium wasabiae WPP163 8531590 YP_003260525.1 CDS Pecwa_3176 NC_013421.1 3460523 3460975 R PFAM: protein of unknown function DUF441; KEGG: eca:ECA1265 hypothetical protein; hypothetical protein complement(3460523..3460975) Pectobacterium wasabiae WPP163 8531591 YP_003260526.1 CDS Pecwa_3177 NC_013421.1 3461177 3461890 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(3461177..3461890) Pectobacterium wasabiae WPP163 8531592 YP_003260527.1 CDS Pecwa_3178 NC_013421.1 3462033 3463070 R PFAM: NlpBDapX family lipoprotein; KEGG: eca:ECA1263 lipoprotein; lipoprotein complement(3462033..3463070) Pectobacterium wasabiae WPP163 8531593 YP_003260528.1 CDS Pecwa_3179 NC_013421.1 3463087 3463965 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(3463087..3463965) Pectobacterium wasabiae WPP163 8531594 YP_003260529.1 CDS gcvR NC_013421.1 3464339 3464890 D negative transcriptional regulator of the gcvTHP operon; glycine cleavage system transcriptional repressor 3464339..3464890 Pectobacterium wasabiae WPP163 8531595 YP_003260530.1 CDS bcp NC_013421.1 3464953 3465420 D bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 3464953..3465420 Pectobacterium wasabiae WPP163 8531596 YP_003260531.1 CDS Pecwa_3182 NC_013421.1 3465590 3467053 D PFAM: peptidase M48 Ste24p; KEGG: eca:ECA1259 hypothetical protein; peptidase M48 Ste24p 3465590..3467053 Pectobacterium wasabiae WPP163 8531597 YP_003260532.1 CDS Pecwa_3183 NC_013421.1 3467068 3467445 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: eca:ECA1258 arsenate reductase; arsenate reductase 3467068..3467445 Pectobacterium wasabiae WPP163 8531598 YP_003260533.1 CDS Pecwa_3184 NC_013421.1 3467497 3468204 R controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor complement(3467497..3468204) Pectobacterium wasabiae WPP163 8531599 YP_003260534.1 CDS Pecwa_3185 NC_013421.1 3468304 3469593 R TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: pct:PC1_1131 uracil-xanthine permease; uracil transporter complement(3468304..3469593) Pectobacterium wasabiae WPP163 8531600 YP_003260535.1 CDS upp NC_013421.1 3469809 3470435 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(3469809..3470435) Pectobacterium wasabiae WPP163 8531601 YP_003260536.1 CDS Pecwa_3187 NC_013421.1 3470788 3471825 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3470788..3471825 Pectobacterium wasabiae WPP163 8531602 YP_003260537.1 CDS purN NC_013421.1 3471825 3472460 D glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 3471825..3472460 Pectobacterium wasabiae WPP163 8531603 YP_003260538.1 CDS Pecwa_3189 NC_013421.1 3472634 3474820 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vcj:VCD_000696 hypothetical protein; TonB-dependent receptor complement(3472634..3474820) Pectobacterium wasabiae WPP163 8531604 YP_003260539.1 CDS Pecwa_3190 NC_013421.1 3475256 3475831 D PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_1125 diamine N-acetyltransferase; diamine N-acetyltransferase 3475256..3475831 Pectobacterium wasabiae WPP163 8531605 YP_003260540.1 CDS Pecwa_3191 NC_013421.1 3476230 3478659 R PFAM: protein of unknown function DUF214; KEGG: eca:ECA1224 hypothetical protein; hypothetical protein complement(3476230..3478659) Pectobacterium wasabiae WPP163 8531606 YP_003260541.1 CDS Pecwa_3192 NC_013421.1 3478656 3479387 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_1123 ABC transporter; ABC transporter complement(3478656..3479387) Pectobacterium wasabiae WPP163 8531607 YP_003260542.1 CDS Pecwa_3193 NC_013421.1 3479400 3479993 D PFAM: lipolytic protein G-D-S-L family; KEGG: eca:ECA1222 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 3479400..3479993 Pectobacterium wasabiae WPP163 8531608 YP_003260543.1 CDS Pecwa_3194 NC_013421.1 3480022 3480792 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pct:PC1_1121 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 3480022..3480792 Pectobacterium wasabiae WPP163 8531609 YP_003260544.1 CDS Pecwa_3195 NC_013421.1 3480903 3481763 D PFAM: thioredoxin domain; KEGG: eca:ECA1220 thioredoxin; thioredoxin 3480903..3481763 Pectobacterium wasabiae WPP163 8531610 YP_003260545.1 CDS Pecwa_3196 NC_013421.1 3482179 3483372 R TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; KEGG: pct:PC1_1119 competence/damage-inducible protein CinA; competence damage-inducible protein A complement(3482179..3483372) Pectobacterium wasabiae WPP163 8531611 YP_003260546.1 CDS Pecwa_3197 NC_013421.1 3483738 3484946 D TIGRFAM: aromatic amino acid transporter; PFAM: tryptophan/tyrosine permease; Amino acid transporter transmembrane; KEGG: pct:PC1_1118 aromatic amino acid transporter; aromatic amino acid transporter 3483738..3484946 Pectobacterium wasabiae WPP163 8531612 YP_003260547.1 CDS Pecwa_3198 NC_013421.1 3485113 3485652 R PFAM: YfaZ family protein; KEGG: eca:ECA1217 hypothetical protein; hypothetical protein complement(3485113..3485652) Pectobacterium wasabiae WPP163 8531613 YP_003260548.1 CDS Pecwa_3199 NC_013421.1 3485765 3487177 R TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA1215 O-succinylbenzoic acid--CoA ligase; O-succinylbenzoic acid--CoA ligase complement(3485765..3487177) Pectobacterium wasabiae WPP163 8531614 YP_003260549.1 CDS Pecwa_3200 NC_013421.1 3487165 3488136 R catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase complement(3487165..3488136) Pectobacterium wasabiae WPP163 8531615 YP_003260550.1 CDS Pecwa_3201 NC_013421.1 3488136 3488993 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(3488136..3488993) Pectobacterium wasabiae WPP163 8531616 YP_003260551.1 CDS Pecwa_3202 NC_013421.1 3488999 3489799 R catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB complement(3488999..3489799) Pectobacterium wasabiae WPP163 8531617 YP_003260552.1 CDS Pecwa_3203 NC_013421.1 3489787 3491469 R SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(3489787..3491469) Pectobacterium wasabiae WPP163 8531618 YP_003260553.1 CDS Pecwa_3204 NC_013421.1 3491759 3493087 R TIGRFAM: isochorismate synthase; PFAM: chorismate binding-like; KEGG: eca:ECA1210 menaquinone-specific isochorismate synthase; isochorismate synthase complement(3491759..3493087) Pectobacterium wasabiae WPP163 8531619 YP_003260554.1 CDS Pecwa_3205 NC_013421.1 3493540 3494301 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eca:ECA1207 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3493540..3494301) Pectobacterium wasabiae WPP163 8531620 YP_003260555.1 CDS Pecwa_3206 NC_013421.1 3494667 3495086 D PFAM: helix-turn-helix HxlR type; regulatory protein MarR; KEGG: eca:ECA1206 transcriptional regulator; HxlR family transcriptional regulator 3494667..3495086 Pectobacterium wasabiae WPP163 8531621 YP_003260556.1 CDS Pecwa_3207 NC_013421.1 3495223 3496392 D PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1109 major facilitator superfamily MFS_1; major facilitator superfamily protein 3495223..3496392 Pectobacterium wasabiae WPP163 8531622 YP_003260557.1 CDS Pecwa_3208 NC_013421.1 3496409 3499096 D KEGG: eca:ECA1204 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: Hpt domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 3496409..3499096 Pectobacterium wasabiae WPP163 8531623 YP_003260558.1 CDS Pecwa_3209 NC_013421.1 3499105 3499755 D two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB 3499105..3499755 Pectobacterium wasabiae WPP163 8531624 YP_003260559.1 CDS Pecwa_3210 NC_013421.1 3499793 3502648 R PFAM: Signal transduction histidine kinase RcsC, alpha-beta loop-like; ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: pct:PC1_1106 histidine kinase; hybrid sensory kinase in two-component regulatory system with RcsB and YojN complement(3499793..3502648) Pectobacterium wasabiae WPP163 8531625 YP_003260560.1 CDS Pecwa_3211 NC_013421.1 3502764 3505403 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(3502764..3505403) Pectobacterium wasabiae WPP163 8531626 YP_003260561.1 CDS Pecwa_3212 NC_013421.1 3505652 3506371 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3505652..3506371 Pectobacterium wasabiae WPP163 8531627 YP_003260562.1 CDS Pecwa_3213 NC_013421.1 3506720 3509005 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3506720..3509005 Pectobacterium wasabiae WPP163 8531628 YP_003260563.1 CDS nrdB NC_013421.1 3509115 3510245 D B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 3509115..3510245 Pectobacterium wasabiae WPP163 8531629 YP_003260564.1 CDS Pecwa_3215 NC_013421.1 3510249 3510509 D plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; 2Fe-2S ferredoxin 3510249..3510509 Pectobacterium wasabiae WPP163 8531630 YP_003260565.1 CDS Pecwa_3216 NC_013421.1 3510782 3511696 D PFAM: band 7 protein; SMART: band 7 protein; KEGG: eca:ECA1196 hypothetical protein; hypothetical protein 3510782..3511696 Pectobacterium wasabiae WPP163 8531631 YP_003260566.1 CDS Pecwa_3217 NC_013421.1 3511696 3512151 D PFAM: protein of unknown function DUF107; KEGG: pct:PC1_1099 hypothetical protein; hypothetical protein 3511696..3512151 Pectobacterium wasabiae WPP163 8531632 YP_003260567.1 CDS Pecwa_3218 NC_013421.1 3512195 3512611 R KEGG: eca:ECA1194 copper efflux regulator; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator complement(3512195..3512611) Pectobacterium wasabiae WPP163 8531633 YP_003260568.1 CDS Pecwa_3219 NC_013421.1 3512844 3513308 D KEGG: abm:ABSDF1448 hypothetical protein; hypothetical protein 3512844..3513308 Pectobacterium wasabiae WPP163 8531634 YP_003260569.1 CDS copA NC_013421.1 3513546 3516269 D TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase type 3; KEGG: eca:ECA1193 copper exporting ATPase; copper exporting ATPase 3513546..3516269 Pectobacterium wasabiae WPP163 8531635 YP_003260570.1 CDS Pecwa_3221 NC_013421.1 3516433 3517251 D PFAM: GumN family protein; KEGG: pct:PC1_1094 GumN family protein; GumN family protein 3516433..3517251 Pectobacterium wasabiae WPP163 8531636 YP_003260571.1 CDS Pecwa_3222 NC_013421.1 3517322 3517801 D TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: eca:ECA1191 hypothetical protein; hypothetical protein 3517322..3517801 Pectobacterium wasabiae WPP163 8531637 YP_003260572.1 CDS Pecwa_3223 NC_013421.1 3517954 3519336 R PFAM: glycoside hydrolase family 28; KEGG: eca:ECA1190 polygalacturonase; glycoside hydrolase family protein complement(3517954..3519336) Pectobacterium wasabiae WPP163 8531638 YP_003260573.1 CDS Pecwa_3224 NC_013421.1 3519603 3520589 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: eca:ECA1189 GTP-binding protein YjiA; GTP-binding protein YjiA complement(3519603..3520589) Pectobacterium wasabiae WPP163 8531639 YP_003260574.1 CDS Pecwa_3225 NC_013421.1 3520606 3520809 R PFAM: protein of unknown function DUF466; KEGG: pct:PC1_1090 hypothetical protein; hypothetical protein complement(3520606..3520809) Pectobacterium wasabiae WPP163 8531640 YP_003260575.1 CDS Pecwa_3226 NC_013421.1 3520955 3523108 R PFAM: carbon starvation protein CstA; KEGG: eca:ECA1187 carbon starvation protein; carbon starvation protein CstA complement(3520955..3523108) Pectobacterium wasabiae WPP163 8531641 YP_003260576.1 CDS Pecwa_3227 NC_013421.1 3523401 3523637 R KEGG: eca:ECA1185 hypothetical protein; hypothetical protein complement(3523401..3523637) Pectobacterium wasabiae WPP163 8531642 YP_003260577.1 CDS ushA NC_013421.1 3523732 3525381 R catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic complement(3523732..3525381) Pectobacterium wasabiae WPP163 8531643 YP_003260578.1 CDS Pecwa_3229 NC_013421.1 3526051 3527736 D YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; cation:proton antiport protein 3526051..3527736 Pectobacterium wasabiae WPP163 8531644 YP_003260579.1 CDS hemH NC_013421.1 3527845 3528807 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(3527845..3528807) Pectobacterium wasabiae WPP163 8531645 YP_003260580.1 CDS adk NC_013421.1 3529030 3529674 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(3529030..3529674) Pectobacterium wasabiae WPP163 8531646 YP_003260581.1 CDS Pecwa_3232 NC_013421.1 3529937 3531826 R molecular chaperone; heat shock protein 90 complement(3529937..3531826) Pectobacterium wasabiae WPP163 8531647 YP_003260582.1 CDS recR NC_013421.1 3531996 3532601 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(3531996..3532601) Pectobacterium wasabiae WPP163 8531648 YP_003260583.1 CDS Pecwa_3234 NC_013421.1 3532601 3532930 R PFAM: conserved hypothetical protein; KEGG: pct:PC1_1077 hypothetical protein; hypothetical protein complement(3532601..3532930) Pectobacterium wasabiae WPP163 8531649 YP_003260584.1 CDS Pecwa_3235 NC_013421.1 3532971 3535043 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma/tau complement(3532971..3535043) Pectobacterium wasabiae WPP163 8531650 YP_003260585.1 CDS Pecwa_3236 NC_013421.1 3535118 3535675 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3535118..3535675) Pectobacterium wasabiae WPP163 8531651 YP_003260586.1 CDS Pecwa_3237 NC_013421.1 3535890 3536291 R PFAM: protein of unknown function DUF454; KEGG: eca:ECA1174 hypothetical protein; hypothetical protein complement(3535890..3536291) Pectobacterium wasabiae WPP163 8531652 YP_003260587.1 CDS Pecwa_3238 NC_013421.1 3536461 3536997 D PFAM: Primosomal replication priB and priC; KEGG: pct:PC1_1073 primosomal replication PriB and PriC; primosomal replication priB and priC 3536461..3536997 Pectobacterium wasabiae WPP163 8531653 YP_003260588.1 CDS Pecwa_3239 NC_013421.1 3537035 3537214 D PFAM: protein of unknown function DUF2496, YbaM-related; KEGG: eca:ECA1172 hypothetical protein; hypothetical protein 3537035..3537214 Pectobacterium wasabiae WPP163 8531654 YP_003260589.1 CDS Pecwa_3240 NC_013421.1 3537255 3537896 R regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR complement(3537255..3537896) Pectobacterium wasabiae WPP163 8531655 YP_003260590.1 CDS Pecwa_3241 NC_013421.1 3538038 3539234 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: hypothetical protein; KEGG: eca:ECA1170 acriflavine resistance protein A; RND family efflux transporter MFP subunit 3538038..3539234 Pectobacterium wasabiae WPP163 8531656 YP_003260591.1 CDS Pecwa_3242 NC_013421.1 3539263 3542391 D TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pct:PC1_1069 transporter hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3539263..3542391 Pectobacterium wasabiae WPP163 8531657 YP_003260592.1 CDS rpmE2 NC_013421.1 3542624 3542872 D RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 3542624..3542872 Pectobacterium wasabiae WPP163 8531658 YP_003260593.1 CDS rpmJ NC_013421.1 3542890 3543033 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 3542890..3543033 Pectobacterium wasabiae WPP163 8531659 YP_003260594.1 CDS Pecwa_3245 NC_013421.1 3543792 3544160 D PFAM: biofilm formation regulator YbaJ; KEGG: pct:PC1_1066 hypothetical protein; hypothetical protein 3543792..3544160 Pectobacterium wasabiae WPP163 8531660 YP_003260595.1 CDS Pecwa_3246 NC_013421.1 3544216 3544419 D with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein 3544216..3544419 Pectobacterium wasabiae WPP163 8531661 YP_003260596.1 CDS Pecwa_3247 NC_013421.1 3545147 3545467 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pct:PC1_1064 methylated-DNA/protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 3545147..3545467 Pectobacterium wasabiae WPP163 8531663 YP_003260597.1 CDS Pecwa_3248 NC_013421.1 3545487 3546071 R KEGG: pct:PC1_1063 lipoprotein; lipoprotein complement(3545487..3546071) Pectobacterium wasabiae WPP163 8531664 YP_003260598.1 CDS Pecwa_3249 NC_013421.1 3546282 3547145 D TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: pct:PC1_1062 acyl-CoA thioesterase II; acyl-CoA thioesterase II 3546282..3547145 Pectobacterium wasabiae WPP163 8531665 YP_003260599.1 CDS Pecwa_3250 NC_013421.1 3547263 3548555 R TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: pct:PC1_1061 ammonium transporter; ammonium transporter complement(3547263..3548555) Pectobacterium wasabiae WPP163 8531666 YP_003260600.1 CDS Pecwa_3251 NC_013421.1 3548589 3548927 R indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.; nitrogen regulatory protein P-II 2 complement(3548589..3548927) Pectobacterium wasabiae WPP163 8531667 YP_003260601.1 CDS Pecwa_3252 NC_013421.1 3549287 3551092 R PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: pct:PC1_1059 ABC transporter related; multidrug transporter membrane\ATP-binding proteins complement(3549287..3551092) Pectobacterium wasabiae WPP163 8531668 YP_003260602.1 CDS Pecwa_3253 NC_013421.1 3551055 3552824 R PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: eca:ECA1158 multidrug transporter membrane\ATP-binding proteins; multidrug transporter membrane\ATP-binding proteins complement(3551055..3552824) Pectobacterium wasabiae WPP163 8531669 YP_003260603.1 CDS Pecwa_3254 NC_013421.1 3553149 3553610 R PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; KEGG: eca:ECA1157 transcription regulator AsnC; AsnC family transcriptional regulator complement(3553149..3553610) Pectobacterium wasabiae WPP163 8531670 YP_003260604.1 CDS Pecwa_3255 NC_013421.1 3553874 3554317 D KEGG: ecs:ECs4618 hypothetical protein; hypothetical protein 3553874..3554317 Pectobacterium wasabiae WPP163 8531671 YP_003260605.1 CDS Pecwa_3256 NC_013421.1 3554476 3555552 D PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pct:PC1_1056 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 3554476..3555552 Pectobacterium wasabiae WPP163 8531672 YP_003260606.1 CDS Pecwa_3257 NC_013421.1 3555677 3556372 D YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; queuosine biosynthesis protein QueC 3555677..3556372 Pectobacterium wasabiae WPP163 8531673 YP_003260607.1 CDS Pecwa_3258 NC_013421.1 3556449 3556847 R PFAM: thioesterase superfamily protein; KEGG: pct:PC1_1054 thioesterase superfamily protein; thioesterase superfamily protein complement(3556449..3556847) Pectobacterium wasabiae WPP163 8531674 YP_003260608.1 CDS Pecwa_3259 NC_013421.1 3556986 3557351 R TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: eca:ECA1153 hypothetical protein; competence protein ComEA complement(3556986..3557351) Pectobacterium wasabiae WPP163 8531675 YP_003260609.1 CDS Pecwa_3260 NC_013421.1 3557490 3559373 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: pct:PC1_1052 PpiC-type peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl cis-trans isomerase complement(3557490..3559373) Pectobacterium wasabiae WPP163 8531676 YP_003260610.1 CDS Pecwa_3261 NC_013421.1 3559710 3559982 R histone-like DNA-binding protein; transcriptional regulator HU subunit beta complement(3559710..3559982) Pectobacterium wasabiae WPP163 8531677 YP_003260611.1 CDS Pecwa_3262 NC_013421.1 3560175 3562556 R KEGG: eca:ECA1150 DNA-binding ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16; ATPase AAA; DNA-binding ATP-dependent protease La complement(3560175..3562556) Pectobacterium wasabiae WPP163 8531678 YP_003260612.1 CDS clpX NC_013421.1 3562747 3564021 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(3562747..3564021) Pectobacterium wasabiae WPP163 8531679 YP_003260613.1 CDS clpP NC_013421.1 3564184 3564807 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(3564184..3564807) Pectobacterium wasabiae WPP163 8531680 YP_003260614.1 CDS tig NC_013421.1 3565339 3566643 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(3565339..3566643) Pectobacterium wasabiae WPP163 8531681 YP_003260615.1 CDS Pecwa_3266 NC_013421.1 3566961 3567275 R positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; transcriptional regulator BolA complement(3566961..3567275) Pectobacterium wasabiae WPP163 8531682 YP_003260616.1 CDS Pecwa_3267 NC_013421.1 3567724 3568302 D PFAM: Uncharacterized lipoprotein; KEGG: pct:PC1_1045 uncharacterized lipoprotein; hypothetical protein 3567724..3568302 Pectobacterium wasabiae WPP163 8531683 YP_003260617.1 CDS ampG NC_013421.1 3568362 3569849 D in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter 3568362..3569849 Pectobacterium wasabiae WPP163 8531684 YP_003260618.1 CDS Pecwa_3269 NC_013421.1 3570271 3571233 D TIGRFAM: ubiquinol oxidase subunit II; PFAM: COX aromatic rich domain protein; cytochrome C oxidase subunit II; KEGG: pct:PC1_1043 ubiquinol oxidase subunit II; cytochrome o ubiquinol oxidase subunit II 3570271..3571233 Pectobacterium wasabiae WPP163 8531685 YP_003260619.1 CDS Pecwa_3270 NC_013421.1 3571238 3573229 D KEGG: eca:ECA1142 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 3571238..3573229 Pectobacterium wasabiae WPP163 8531686 YP_003260620.1 CDS Pecwa_3271 NC_013421.1 3573219 3573833 D TIGRFAM: cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome C oxidase subunit III; KEGG: eca:ECA1141 cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III 3573219..3573833 Pectobacterium wasabiae WPP163 8531687 YP_003260621.1 CDS Pecwa_3272 NC_013421.1 3573833 3574165 D TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: eca:ECA1140 cytochrome o ubiquinol oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV 3573833..3574165 Pectobacterium wasabiae WPP163 8531688 YP_003260622.1 CDS Pecwa_3273 NC_013421.1 3574180 3575070 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 3574180..3575070 Pectobacterium wasabiae WPP163 8531689 YP_003260623.1 CDS Pecwa_3274 NC_013421.1 3575304 3576668 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1138 transporter; major facilitator superfamily protein 3575304..3576668 Pectobacterium wasabiae WPP163 8531690 YP_003260624.1 CDS Pecwa_3275 NC_013421.1 3576730 3577221 R nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein complement(3576730..3577221) Pectobacterium wasabiae WPP163 8531691 YP_003260625.1 CDS Pecwa_3276 NC_013421.1 3577410 3578318 D Ketopantoate reductase; catalyzes the NADPH reduction of Ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 3577410..3578318 Pectobacterium wasabiae WPP163 8531692 YP_003260626.1 CDS Pecwa_3277 NC_013421.1 3578281 3578871 D TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA1135 hypothetical protein; DJ-1 family protein 3578281..3578871 Pectobacterium wasabiae WPP163 8531693 YP_003260627.1 CDS Pecwa_3278 NC_013421.1 3578938 3580386 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(3578938..3580386) Pectobacterium wasabiae WPP163 8531694 YP_003260628.1 CDS Pecwa_3279 NC_013421.1 3580640 3580888 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 3580640..3580888 Pectobacterium wasabiae WPP163 8531695 YP_003260629.1 CDS Pecwa_3280 NC_013421.1 3580885 3581796 D PFAM: polyprenyl synthetase; KEGG: pct:PC1_1031 polyprenyl synthetase; geranyltranstransferase 3580885..3581796 Pectobacterium wasabiae WPP163 8531696 YP_003260630.1 CDS Pecwa_3281 NC_013421.1 3581814 3583679 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 3581814..3583679 Pectobacterium wasabiae WPP163 8531697 YP_003260631.1 CDS Pecwa_3282 NC_013421.1 3583789 3584769 R catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase complement(3583789..3584769) Pectobacterium wasabiae WPP163 8531698 YP_003260632.1 CDS nusB NC_013421.1 3584838 3585257 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(3584838..3585257) Pectobacterium wasabiae WPP163 8531699 YP_003260633.1 CDS ribH NC_013421.1 3585282 3585758 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; subunit beta of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(3585282..3585758) Pectobacterium wasabiae WPP163 8531700 YP_003260634.1 CDS ribD NC_013421.1 3585869 3586978 R riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase complement(3585869..3586978) Pectobacterium wasabiae WPP163 8531701 YP_003260635.1 CDS nrdR NC_013421.1 3587071 3587520 R PFAM: ATP-cone domain protein; KEGG: pct:PC1_1024 ATP-cone domain protein; NrdR family transcriptional regulator complement(3587071..3587520) Pectobacterium wasabiae WPP163 8531702 YP_003260636.1 CDS Pecwa_3287 NC_013421.1 3587730 3588299 D KEGG: eca:ECA1124 hypothetical protein; hypothetical protein 3587730..3588299 Pectobacterium wasabiae WPP163 8531703 YP_003260637.1 CDS secF NC_013421.1 3588372 3589340 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(3588372..3589340) Pectobacterium wasabiae WPP163 8531704 YP_003260638.1 CDS secD NC_013421.1 3589351 3591165 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(3589351..3591165) Pectobacterium wasabiae WPP163 8531705 YP_003260639.1 CDS yajC NC_013421.1 3591226 3591555 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(3591226..3591555) Pectobacterium wasabiae WPP163 8531706 YP_003260640.1 CDS tgt NC_013421.1 3591664 3592809 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(3591664..3592809) Pectobacterium wasabiae WPP163 8531707 YP_003260641.1 CDS queA NC_013421.1 3593029 3594096 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(3593029..3594096) Pectobacterium wasabiae WPP163 8531708 YP_003260642.1 CDS Pecwa_3293 NC_013421.1 3594229 3594810 D PFAM: protein of unknown function DUF479; KEGG: eca:ECA1118 hypothetical protein; (acyl-carrier-protein) phosphodiesterase 3594229..3594810 Pectobacterium wasabiae WPP163 8531709 YP_003260643.1 CDS Pecwa_3294 NC_013421.1 3595023 3595625 D PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; peroxiredoxin-like; redoxin; KEGG: pct:PC1_1015 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 3595023..3595625 Pectobacterium wasabiae WPP163 8531710 YP_003260644.1 CDS Pecwa_3295 NC_013421.1 3595843 3597117 D PFAM: MscS Mechanosensitive ion channel; KEGG: pct:PC1_1014 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 3595843..3597117 Pectobacterium wasabiae WPP163 8531711 YP_003260645.1 CDS proY NC_013421.1 3597350 3598726 R cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; proline-specific permease complement(3597350..3598726) Pectobacterium wasabiae WPP163 8531713 YP_003260646.1 CDS Pecwa_3298 NC_013421.1 3598859 3600178 R TIGRFAM: branched-chain amino acid transporter II carrier protein; PFAM: branched-chain amino acid transporter II carrier protein; KEGG: eca:ECA1114 branched-chain amino acid transporter II carrier protein; branched-chain amino acid transporter II carrier protein complement(3598859..3600178) Pectobacterium wasabiae WPP163 8531714 YP_003260647.1 CDS Pecwa_3299 NC_013421.1 3600657 3601763 R catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(3600657..3601763) Pectobacterium wasabiae WPP163 8531715 YP_003260648.1 CDS Pecwa_3300 NC_013421.1 3602006 3602944 R TIGRFAM: phosphate binding protein; KEGG: pct:PC1_1010 phosphate binding protein; phosphate binding protein complement(3602006..3602944) Pectobacterium wasabiae WPP163 8531716 YP_003260649.1 CDS phoR NC_013421.1 3602960 3604282 R membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein complement(3602960..3604282) Pectobacterium wasabiae WPP163 8531717 YP_003260650.1 CDS Pecwa_3302 NC_013421.1 3604310 3604999 R KEGG: pct:PC1_1008 two component transcriptional regulator PhoB, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver; winged helix family two component transcriptional regulator PhoB complement(3604310..3604999) Pectobacterium wasabiae WPP163 8531718 YP_003260651.1 CDS Pecwa_3303 NC_013421.1 3605294 3606520 D with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease subunit SbcD 3605294..3606520 Pectobacterium wasabiae WPP163 8531719 YP_003260652.1 CDS Pecwa_3304 NC_013421.1 3606517 3610200 D TIGRFAM: exonuclease SbcC; PFAM: SMC domain protein; KEGG: eca:ECA1108 exonuclease; exonuclease SbcC 3606517..3610200 Pectobacterium wasabiae WPP163 8531720 YP_003260653.1 CDS Pecwa_3305 NC_013421.1 3610204 3611115 R catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase complement(3610204..3611115) Pectobacterium wasabiae WPP163 8531721 YP_003260654.1 CDS rdgC NC_013421.1 3611405 3612334 D Required for efficient pilin antigenic variation; recombination associated protein 3611405..3612334 Pectobacterium wasabiae WPP163 8531722 YP_003260655.1 CDS Pecwa_3307 NC_013421.1 3612397 3614187 R PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA1105 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(3612397..3614187) Pectobacterium wasabiae WPP163 8531723 YP_003260656.1 CDS Pecwa_3308 NC_013421.1 3614862 3615608 D PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pct:PC1_1002 GntR family transcriptional regulator; GntR family transcriptional regulator 3614862..3615608 Pectobacterium wasabiae WPP163 8531724 YP_003260657.1 CDS Pecwa_3309 NC_013421.1 3615582 3616559 R PFAM: PfkB domain protein; KEGG: pct:PC1_1001 PfkB domain protein; PfkB domain-containing protein complement(3615582..3616559) Pectobacterium wasabiae WPP163 8531725 YP_003260658.1 CDS Pecwa_3310 NC_013421.1 3616559 3617560 R PFAM: ADP-ribosylation/crystallin J1; KEGG: pct:PC1_1000 ADP-ribosylation/crystallin J1; ADP-ribosylation/crystallin J1 complement(3616559..3617560) Pectobacterium wasabiae WPP163 8531726 YP_003260659.1 CDS Pecwa_3311 NC_013421.1 3617557 3618834 R TIGRFAM: nucleoside transporter; PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: pct:PC1_0999 nucleoside transporter; nucleoside transporter complement(3617557..3618834) Pectobacterium wasabiae WPP163 8531727 YP_003260660.1 CDS Pecwa_3312 NC_013421.1 3619177 3619461 R PFAM: protein of unknown function DUF1255; KEGG: eca:ECA1104 hypothetical protein; hypothetical protein complement(3619177..3619461) Pectobacterium wasabiae WPP163 8531728 YP_003260661.1 CDS aroL NC_013421.1 3619600 3620121 R type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(3619600..3620121) Pectobacterium wasabiae WPP163 8531729 YP_003260662.1 CDS Pecwa_3314 NC_013421.1 3620381 3621421 R KEGG: eca:ECA1102 L-asparaginase precursor; TIGRFAM: L-asparaginase, type II; PFAM: asparaginase/glutaminase; type II L-asparaginase complement(3620381..3621421) Pectobacterium wasabiae WPP163 8531730 YP_003260663.1 CDS Pecwa_3315 NC_013421.1 3621637 3623283 R efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane component/ATP-binding protein complement(3621637..3623283) Pectobacterium wasabiae WPP163 8531731 YP_003260664.1 CDS Pecwa_3318 NC_013421.1 3639129 3640541 D TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pct:PC1_0993 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 3639129..3640541 Pectobacterium wasabiae WPP163 8531733 YP_003260665.1 CDS Pecwa_3319 NC_013421.1 3640569 3642707 D KEGG: pct:PC1_0992 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; type I secretion system ATPase 3640569..3642707 Pectobacterium wasabiae WPP163 8531734 YP_003260666.1 CDS Pecwa_3320 NC_013421.1 3642719 3643888 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: hypothetical protein; KEGG: eca:ECA1096 type I hypothetical protein; HlyD family type I secretion membrane fusion protein 3642719..3643888 Pectobacterium wasabiae WPP163 8531735 YP_003260667.1 CDS Pecwa_3321 NC_013421.1 3643970 3645178 R PFAM: glycoside hydrolase family 28; KEGG: eca:ECA1095 endo-polygalacturonase; glycoside hydrolase family protein complement(3643970..3645178) Pectobacterium wasabiae WPP163 8531736 YP_003260668.1 CDS Pecwa_3322 NC_013421.1 3645746 3646789 D PFAM: pectate lyase; KEGG: eca:ECA1094 pectate lyase; pectate lyase 3645746..3646789 Pectobacterium wasabiae WPP163 8531737 YP_003260669.1 CDS Pecwa_3323 NC_013421.1 3646878 3648074 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(3646878..3648074) Pectobacterium wasabiae WPP163 8531738 YP_003260670.1 CDS Pecwa_3324 NC_013421.1 3648358 3649092 R PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pct:PC1_0986 GntR domain protein; GntR family transcriptional regulator complement(3648358..3649092) Pectobacterium wasabiae WPP163 8531739 YP_003260671.1 CDS Pecwa_3325 NC_013421.1 3649303 3650496 D KEGG: eca:ECA1090 lipoprotein; lipoprotein 3649303..3650496 Pectobacterium wasabiae WPP163 8531740 YP_003260672.1 CDS Pecwa_3326 NC_013421.1 3650582 3651826 D PFAM: stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: pct:PC1_0984 protein serine/threonine phosphatase; protein serine/threonine phosphatase 3650582..3651826 Pectobacterium wasabiae WPP163 8531741 YP_003260673.1 CDS Pecwa_3327 NC_013421.1 3651840 3652394 D KEGG: eca:ECA1088 hypothetical protein; hypothetical protein 3651840..3652394 Pectobacterium wasabiae WPP163 8531742 YP_003260674.1 CDS Pecwa_3328 NC_013421.1 3652396 3652848 D PFAM: Domain of unknown function DUF1987; KEGG: eca:ECA1087 lipoprotein; hypothetical protein 3652396..3652848 Pectobacterium wasabiae WPP163 8531743 YP_003260675.1 CDS Pecwa_3329 NC_013421.1 3652835 3653542 D KEGG: eca:ECA1086 signaling protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3652835..3653542 Pectobacterium wasabiae WPP163 8531744 YP_003260676.1 CDS Pecwa_3330 NC_013421.1 3653622 3654515 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA1085 LysR family transcriptional regulator; LysR family transcriptional regulator 3653622..3654515 Pectobacterium wasabiae WPP163 8531745 YP_003260677.1 CDS Pecwa_3331 NC_013421.1 3654512 3655237 R PFAM: protein of unknown function DUF81; KEGG: pct:PC1_0979 hypothetical protein; hypothetical protein complement(3654512..3655237) Pectobacterium wasabiae WPP163 8531746 YP_003260678.1 CDS Pecwa_3332 NC_013421.1 3655617 3655859 D hypothetical protein 3655617..3655859 Pectobacterium wasabiae WPP163 8531747 YP_003260679.1 CDS Pecwa_3333 NC_013421.1 3655764 3656834 R membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B complement(3655764..3656834) Pectobacterium wasabiae WPP163 8531748 YP_003260680.1 CDS Pecwa_3334 NC_013421.1 3656973 3657314 R TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: pct:PC1_0976 alkylphosphonate utilization operon protein PhnA; alkylphosphonate utilization operon protein PhnA complement(3656973..3657314) Pectobacterium wasabiae WPP163 8531749 YP_003260681.1 CDS Pecwa_3335 NC_013421.1 3657435 3659057 R PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: eca:ECA1081 transcriptional regulator; EAL domain-containing protein complement(3657435..3659057) Pectobacterium wasabiae WPP163 8531750 YP_003260682.1 CDS Pecwa_3337 NC_013421.1 3660802 3663366 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 3660802..3663366 Pectobacterium wasabiae WPP163 8531752 YP_003260683.1 CDS Pecwa_3338 NC_013421.1 3663442 3664131 R PFAM: copper resistance lipoprotein NlpE; KEGG: pct:PC1_0963 copper resistance lipoprotein NlpE; lipoprotein involved with copper homeostasis and adhesion complement(3663442..3664131) Pectobacterium wasabiae WPP163 8531753 YP_003260684.1 CDS Pecwa_3339 NC_013421.1 3664200 3664754 R PFAM: YaeQ family protein; KEGG: eca:ECA1051 hypothetical protein; YaeQ family protein complement(3664200..3664754) Pectobacterium wasabiae WPP163 8531754 YP_003260685.1 CDS Pecwa_3340 NC_013421.1 3664994 3665194 D PFAM: protein of unknown function UPF0253; KEGG: pct:PC1_0961 hypothetical protein; hypothetical protein 3664994..3665194 Pectobacterium wasabiae WPP163 8531755 YP_003260686.1 CDS Pecwa_3341 NC_013421.1 3665181 3665441 D Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Rho-binding antiterminator 3665181..3665441 Pectobacterium wasabiae WPP163 8531756 YP_003260687.1 CDS tilS NC_013421.1 3665554 3666873 R Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase complement(3665554..3666873) Pectobacterium wasabiae WPP163 8531757 YP_003260688.1 CDS Pecwa_3343 NC_013421.1 3666878 3667267 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eca:ECA1048 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3666878..3667267) Pectobacterium wasabiae WPP163 8531758 YP_003260689.1 CDS Pecwa_3344 NC_013421.1 3667378 3668337 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(3667378..3668337) Pectobacterium wasabiae WPP163 8531759 YP_003260690.1 CDS dnaE NC_013421.1 3668350 3671832 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(3668350..3671832) Pectobacterium wasabiae WPP163 8531760 YP_003260691.1 CDS rnhB NC_013421.1 3671909 3672505 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(3671909..3672505) Pectobacterium wasabiae WPP163 8531761 YP_003260692.1 CDS lpxB NC_013421.1 3672527 3673678 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(3672527..3673678) Pectobacterium wasabiae WPP163 8531762 YP_003260693.1 CDS Pecwa_3348 NC_013421.1 3673682 3674470 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(3673682..3674470) Pectobacterium wasabiae WPP163 8531763 YP_003260694.1 CDS fabZ NC_013421.1 3674475 3674930 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(3674475..3674930) Pectobacterium wasabiae WPP163 8531764 YP_003260695.1 CDS lpxD NC_013421.1 3675033 3676055 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(3675033..3676055) Pectobacterium wasabiae WPP163 8531765 YP_003260696.1 CDS Pecwa_3351 NC_013421.1 3676059 3676556 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: eca:ECA1040 periplasmic chaperone; periplasmic chaperone complement(3676059..3676556) Pectobacterium wasabiae WPP163 8531766 YP_003260697.1 CDS Pecwa_3352 NC_013421.1 3676697 3679144 R part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; outer membrane protein assembly factor YaeT complement(3676697..3679144) Pectobacterium wasabiae WPP163 8531767 YP_003260698.1 CDS Pecwa_3353 NC_013421.1 3679180 3680535 R catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP complement(3679180..3680535) Pectobacterium wasabiae WPP163 8531768 YP_003260699.1 CDS cdsA NC_013421.1 3680557 3681414 R catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; CDP-diglyceride synthase complement(3680557..3681414) Pectobacterium wasabiae WPP163 8531769 YP_003260700.1 CDS Pecwa_3355 NC_013421.1 3681424 3682185 R KEGG: pct:PC1_0946 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(3681424..3682185) Pectobacterium wasabiae WPP163 8531770 YP_003260701.1 CDS Pecwa_3356 NC_013421.1 3682384 3683580 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(3682384..3683580) Pectobacterium wasabiae WPP163 8531771 YP_003260702.1 CDS frr NC_013421.1 3683832 3684389 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(3683832..3684389) Pectobacterium wasabiae WPP163 8531772 YP_003260703.1 CDS pyrH NC_013421.1 3684515 3685240 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(3684515..3685240) Pectobacterium wasabiae WPP163 8531773 YP_003260704.1 CDS tsf NC_013421.1 3685394 3686245 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(3685394..3686245) Pectobacterium wasabiae WPP163 8531774 YP_003260705.1 CDS rpsB NC_013421.1 3686380 3687105 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(3686380..3687105) Pectobacterium wasabiae WPP163 8531775 YP_003260706.1 CDS Pecwa_3361 NC_013421.1 3687453 3688247 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 3687453..3688247 Pectobacterium wasabiae WPP163 8531776 YP_003260707.1 CDS Pecwa_3362 NC_013421.1 3688360 3691071 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3688360..3691071 Pectobacterium wasabiae WPP163 8531777 YP_003260708.1 CDS dapD NC_013421.1 3691100 3691927 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3691100..3691927 Pectobacterium wasabiae WPP163 8531778 YP_003260709.1 CDS Pecwa_3364 NC_013421.1 3691981 3692370 D KEGG: eca:ECA1027 hypothetical protein; hypothetical protein 3691981..3692370 Pectobacterium wasabiae WPP163 8531779 YP_003260710.1 CDS Pecwa_3365 NC_013421.1 3692475 3692930 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin complement(3692475..3692930) Pectobacterium wasabiae WPP163 8531780 YP_003260711.1 CDS Pecwa_3366 NC_013421.1 3693009 3693794 R catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C complement(3693009..3693794) Pectobacterium wasabiae WPP163 8531781 YP_003260712.1 CDS Pecwa_3367 NC_013421.1 3693787 3694137 R PFAM: protein of unknown function DUF446; KEGG: pct:PC1_0934 hypothetical protein; hypothetical protein complement(3693787..3694137) Pectobacterium wasabiae WPP163 8531782 YP_003260713.1 CDS Pecwa_3368 NC_013421.1 3694130 3694252 R hypothetical protein complement(3694130..3694252) Pectobacterium wasabiae WPP163 8531783 YP_003260714.1 CDS Pecwa_3369 NC_013421.1 3694230 3694676 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: eca:ECA1023 MarR family transcriptional regulator; MarR family transcriptional regulator complement(3694230..3694676) Pectobacterium wasabiae WPP163 8531784 YP_003260715.1 CDS Pecwa_3370 NC_013421.1 3694900 3696576 R PFAM: amidohydrolase; amidohydrolase; KEGG: eca:ECA1022 exoenzyme regulatory protein; amidohydrolase complement(3694900..3696576) Pectobacterium wasabiae WPP163 8531785 YP_003260716.1 CDS Pecwa_3371 NC_013421.1 3697392 3697940 R SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd complement(3697392..3697940) Pectobacterium wasabiae WPP163 8531786 YP_003260717.1 CDS queF NC_013421.1 3698011 3698859 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3698011..3698859 Pectobacterium wasabiae WPP163 8531787 YP_003260718.1 CDS Pecwa_3373 NC_013421.1 3699298 3700662 D PFAM: conserved hypothetical protein; KEGG: eca:ECA1019 lysine decarboxylase family protein; hypothetical protein 3699298..3700662 Pectobacterium wasabiae WPP163 8531788 YP_003260719.1 CDS xni NC_013421.1 3700725 3701519 D has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 3700725..3701519 Pectobacterium wasabiae WPP163 8531789 YP_003260720.1 CDS Pecwa_3375 NC_013421.1 3701565 3702665 R KEGG: eca:ECA1017 RNA 2'-O-ribose methyltransferase; RNA 2'-O-ribose methyltransferase complement(3701565..3702665) Pectobacterium wasabiae WPP163 8531790 YP_003260721.1 CDS Pecwa_3376 NC_013421.1 3702658 3703053 R PFAM: protein of unknown function DUF423; KEGG: pct:PC1_0928 hypothetical protein; hypothetical protein complement(3702658..3703053) Pectobacterium wasabiae WPP163 8531791 YP_003260722.1 CDS Pecwa_3377 NC_013421.1 3703310 3704233 R glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(3703310..3704233) Pectobacterium wasabiae WPP163 8531792 YP_003260723.1 CDS Pecwa_3378 NC_013421.1 3704896 3705117 R PFAM: protein of unknown function DUF903; KEGG: eca:ECA1013 lipoprotein; hypothetical protein complement(3704896..3705117) Pectobacterium wasabiae WPP163 8531793 YP_003260724.1 CDS Pecwa_3379 NC_013421.1 3705301 3706506 D PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: eca:ECA1012 cysteine sulfinate desulfinase; cysteine sulfinate desulfinase 3705301..3706506 Pectobacterium wasabiae WPP163 8531794 YP_003260725.1 CDS Pecwa_3380 NC_013421.1 3706522 3706977 D TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE; KEGG: pct:PC1_0924 cysteine desulfurase, sulfur acceptor subunit CsdE; cysteine desulfurase, sulfur acceptor subunit CsdE 3706522..3706977 Pectobacterium wasabiae WPP163 8531795 YP_003260726.1 CDS Pecwa_3381 NC_013421.1 3706992 3707810 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: eca:ECA1010 hypothetical protein; UBA/THIF-type NAD/FAD binding protein complement(3706992..3707810) Pectobacterium wasabiae WPP163 8531796 YP_003260727.1 CDS Pecwa_3382 NC_013421.1 3707877 3710135 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: eca:ECA1009 biotin sulfoxide reductase; molybdopterin oxidoreductase complement(3707877..3710135) Pectobacterium wasabiae WPP163 8531797 YP_003260728.1 CDS mltA NC_013421.1 3710164 3711327 R membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A complement(3710164..3711327) Pectobacterium wasabiae WPP163 8531798 YP_003260729.1 CDS Pecwa_3384 NC_013421.1 3712098 3713342 R KEGG: eca:ECA1000 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase complement(3712098..3713342) Pectobacterium wasabiae WPP163 8531802 YP_003260730.1 CDS Pecwa_3385 NC_013421.1 3713620 3714945 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 3713620..3714945 Pectobacterium wasabiae WPP163 8531803 YP_003260731.1 CDS Pecwa_3386 NC_013421.1 3715010 3716206 R PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0998 mandelate racemase; mandelate racemase/muconate lactonizing protein complement(3715010..3716206) Pectobacterium wasabiae WPP163 8531804 YP_003260732.1 CDS Pecwa_3387 NC_013421.1 3716534 3717556 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA0997 LacI family transcriptional regulator; LacI family transcriptional regulator 3716534..3717556 Pectobacterium wasabiae WPP163 8531805 YP_003260733.1 CDS recD NC_013421.1 3717588 3719444 R helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha complement(3717588..3719444) Pectobacterium wasabiae WPP163 8531806 YP_003260734.1 CDS recB NC_013421.1 3719441 3723052 R helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta complement(3719441..3723052) Pectobacterium wasabiae WPP163 8531807 YP_003260735.1 CDS Pecwa_3390 NC_013421.1 3723049 3725997 R PFAM: peptidase M16 domain protein; KEGG: eca:ECA0994 protease III precursor; peptidase M16 domain-containing protein complement(3723049..3725997) Pectobacterium wasabiae WPP163 8531808 YP_003260736.1 CDS recC NC_013421.1 3726083 3729481 R catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma complement(3726083..3729481) Pectobacterium wasabiae WPP163 8531809 YP_003260737.1 CDS Pecwa_3392 NC_013421.1 3729542 3729934 R KEGG: eca:ECA0992 prepilin peptidase dependent protein c precursor; prepilin peptidase dependent protein c complement(3729542..3729934) Pectobacterium wasabiae WPP163 8531810 YP_003260738.1 CDS Pecwa_3393 NC_013421.1 3729921 3730376 R PFAM: protein of unknown function DUF2509; KEGG: eca:ECA0991 hypothetical protein; hypothetical protein complement(3729921..3730376) Pectobacterium wasabiae WPP163 8531811 YP_003260739.1 CDS Pecwa_3394 NC_013421.1 3730373 3730984 R KEGG: eca:ECA0990 hypothetical protein; hypothetical protein complement(3730373..3730984) Pectobacterium wasabiae WPP163 8531812 YP_003260740.1 CDS Pecwa_3395 NC_013421.1 3731008 3731511 R KEGG: pct:PC1_0908 hypothetical protein; hypothetical protein complement(3731008..3731511) Pectobacterium wasabiae WPP163 8531813 YP_003260741.1 CDS thyA NC_013421.1 3731689 3732483 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(3731689..3732483) Pectobacterium wasabiae WPP163 8531814 YP_003260742.1 CDS Pecwa_3397 NC_013421.1 3732520 3733389 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(3732520..3733389) Pectobacterium wasabiae WPP163 8531815 YP_003260743.1 CDS Pecwa_3398 NC_013421.1 3733612 3735858 R member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain complement(3733612..3735858) Pectobacterium wasabiae WPP163 8531816 YP_003260744.1 CDS Pecwa_3399 NC_013421.1 3735871 3736407 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(3735871..3736407) Pectobacterium wasabiae WPP163 8531817 YP_003260745.1 CDS Pecwa_3400 NC_013421.1 3737103 3737795 D MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 3737103..3737795 Pectobacterium wasabiae WPP163 8531818 YP_003260746.1 CDS Pecwa_3401 NC_013421.1 3737905 3738123 D PFAM: protein of unknown function DUF903; KEGG: pct:PC1_0900 hypothetical protein; hypothetical protein 3737905..3738123 Pectobacterium wasabiae WPP163 8531819 YP_003260747.1 CDS Pecwa_3402 NC_013421.1 3738028 3738276 R hypothetical protein complement(3738028..3738276) Pectobacterium wasabiae WPP163 8531820 YP_003260748.1 CDS tas NC_013421.1 3738329 3739390 D complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; aldo-keto reductase 3738329..3739390 Pectobacterium wasabiae WPP163 8531821 YP_003260749.1 CDS Pecwa_3404 NC_013421.1 3739450 3740163 R KEGG: pct:PC1_0885 hypothetical protein; hypothetical protein complement(3739450..3740163) Pectobacterium wasabiae WPP163 8531822 YP_003260750.1 CDS Pecwa_3405 NC_013421.1 3740277 3740621 R PFAM: protein of unknown function DUF469; KEGG: eca:ECA0978 hypothetical protein; hypothetical protein complement(3740277..3740621) Pectobacterium wasabiae WPP163 8531823 YP_003260751.1 CDS trmB NC_013421.1 3740623 3741342 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(3740623..3741342) Pectobacterium wasabiae WPP163 8531824 YP_003260752.1 CDS Pecwa_3407 NC_013421.1 3741508 3742614 D KEGG: eca:ECA0976 adenine DNA glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop; adenine DNA glycosylase 3741508..3742614 Pectobacterium wasabiae WPP163 8531825 YP_003260753.1 CDS Pecwa_3408 NC_013421.1 3742611 3742883 D PFAM: Fe(II) trafficking protein YggX; KEGG: pct:PC1_0881 Fe(II) trafficking protein YggX; hypothetical protein 3742611..3742883 Pectobacterium wasabiae WPP163 8531826 YP_003260754.1 CDS mltC NC_013421.1 3742885 3744009 D Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 3742885..3744009 Pectobacterium wasabiae WPP163 8531827 YP_003260755.1 CDS Pecwa_3410 NC_013421.1 3744079 3745158 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA0973 AraC family transcription regulator; AraC family transcriptional regulator 3744079..3745158 Pectobacterium wasabiae WPP163 8531828 YP_003260756.1 CDS Pecwa_3411 NC_013421.1 3745121 3746164 R KEGG: eca:ECA0972 hypothetical protein; hypothetical protein complement(3745121..3746164) Pectobacterium wasabiae WPP163 8531829 YP_003260757.1 CDS Pecwa_3412 NC_013421.1 3746724 3747134 D KEGG: plu:plu3955 hypothetical protein; hypothetical protein 3746724..3747134 Pectobacterium wasabiae WPP163 8531830 YP_003260758.1 CDS Pecwa_3413 NC_013421.1 3747254 3748084 R PFAM: TIM-barrel signal transduction protein; KEGG: eca:ECA0971 hypothetical protein; TIM-barrel signal transduction protein complement(3747254..3748084) Pectobacterium wasabiae WPP163 8531831 YP_003260759.1 CDS Pecwa_3414 NC_013421.1 3748101 3749309 R PFAM: conserved hypothetical protein; KEGG: eca:ECA0970 hypothetical protein; hypothetical protein complement(3748101..3749309) Pectobacterium wasabiae WPP163 8531832 YP_003260760.1 CDS Pecwa_3415 NC_013421.1 3749598 3750227 D PFAM: regulatory protein TetR; KEGG: eca:ECA0969 TetR family transcriptional regulator; TetR family transcriptional regulator 3749598..3750227 Pectobacterium wasabiae WPP163 8531833 YP_003260761.1 CDS Pecwa_3416 NC_013421.1 3750304 3750690 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pct:PC1_0874 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3750304..3750690 Pectobacterium wasabiae WPP163 8531834 YP_003260762.1 CDS Pecwa_3417 NC_013421.1 3751076 3752527 D PFAM: amino acid permease-associated region; KEGG: pct:PC1_0873 amino acid permease-associated region; amino acid permease 3751076..3752527 Pectobacterium wasabiae WPP163 8531835 YP_003260763.1 CDS Pecwa_3418 NC_013421.1 3752619 3754772 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: eca:ECA0967 ornithine decarboxylase; ornithine decarboxylase complement(3752619..3754772) Pectobacterium wasabiae WPP163 8531836 YP_003260764.1 CDS Pecwa_3419 NC_013421.1 3755687 3756946 D PFAM: integrase; KEGG: dze:Dd1591_3537 integrase; integrase 3755687..3756946 Pectobacterium wasabiae WPP163 8531838 YP_003260765.1 CDS Pecwa_3420 NC_013421.1 3757210 3758061 D KEGG: eci:UTI89_C0293 hypothetical protein; hypothetical protein 3757210..3758061 Pectobacterium wasabiae WPP163 8531839 YP_003260766.1 CDS Pecwa_3421 NC_013421.1 3758568 3759032 R PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: eci:UTI89_C0292 transcription regulator; XRE family transcriptional regulator complement(3758568..3759032) Pectobacterium wasabiae WPP163 8531840 YP_003260767.1 CDS Pecwa_3422 NC_013421.1 3759273 3759770 D KEGG: eci:UTI89_C0291 hypothetical protein; hypothetical protein 3759273..3759770 Pectobacterium wasabiae WPP163 8531841 YP_003260768.1 CDS Pecwa_3423 NC_013421.1 3759928 3760485 R PFAM: Resolvase domain; KEGG: eci:UTI89_C0290 resolvase; resolvase complement(3759928..3760485) Pectobacterium wasabiae WPP163 8531842 YP_003260769.1 CDS Pecwa_3424 NC_013421.1 3760731 3761171 D KEGG: bbr:BB4149 hypothetical protein; hypothetical protein 3760731..3761171 Pectobacterium wasabiae WPP163 8531843 YP_003260770.1 CDS Pecwa_3425 NC_013421.1 3761168 3761536 D KEGG: bbr:BB4148 hypothetical protein; hypothetical protein 3761168..3761536 Pectobacterium wasabiae WPP163 8531844 YP_003260771.1 CDS Pecwa_3426 NC_013421.1 3761575 3761961 R hypothetical protein complement(3761575..3761961) Pectobacterium wasabiae WPP163 8531845 YP_003260772.1 CDS Pecwa_3428 NC_013421.1 3762474 3764414 R PFAM: integrase; KEGG: eci:UTI89_C0286 integrase; integrase complement(3762474..3764414) Pectobacterium wasabiae WPP163 8531847 YP_003260773.1 CDS Pecwa_3429 NC_013421.1 3765246 3767312 D PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: avi:Avi_1253 polyphenol oxidase protein; multicopper oxidase type 3 3765246..3767312 Pectobacterium wasabiae WPP163 8531849 YP_003260774.1 CDS proA NC_013421.1 3767431 3768684 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(3767431..3768684) Pectobacterium wasabiae WPP163 8531850 YP_003260775.1 CDS Pecwa_3431 NC_013421.1 3768695 3769798 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(3768695..3769798) Pectobacterium wasabiae WPP163 8531851 YP_003260776.1 CDS Pecwa_3432 NC_013421.1 3769922 3770296 R involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl complement(3769922..3770296) Pectobacterium wasabiae WPP163 8531852 YP_003260777.1 CDS Pecwa_3433 NC_013421.1 3770347 3772497 R PFAM: ankyrin; SMART: ankyrin; KEGG: pct:PC1_3286 ankyrin; ankyrin complement(3770347..3772497) Pectobacterium wasabiae WPP163 8531853 YP_003260778.1 CDS Pecwa_3434 NC_013421.1 3772509 3774548 R PFAM: ankyrin; KEGG: pct:PC1_3287 ankyrin; ankyrin complement(3772509..3774548) Pectobacterium wasabiae WPP163 8531854 YP_003260779.1 CDS frsA NC_013421.1 3774620 3775870 R forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein complement(3774620..3775870) Pectobacterium wasabiae WPP163 8531855 YP_003260780.1 CDS Pecwa_3436 NC_013421.1 3776086 3776544 R catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase complement(3776086..3776544) Pectobacterium wasabiae WPP163 8531856 YP_003260781.1 CDS Pecwa_3437 NC_013421.1 3776875 3778335 D KEGG: pct:PC1_3290 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20; aminoacyl-histidine dipeptidase 3776875..3778335 Pectobacterium wasabiae WPP163 8531857 YP_003260782.1 CDS Pecwa_3438 NC_013421.1 3778400 3779458 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(3778400..3779458) Pectobacterium wasabiae WPP163 8531858 YP_003260783.1 CDS Pecwa_3439 NC_013421.1 3779533 3780333 R SMART: hypothetical protein; KEGG: eca:ECA3469 DNA-binding protein; XRE family transcriptional regulator complement(3779533..3780333) Pectobacterium wasabiae WPP163 8531859 YP_003260784.1 CDS Pecwa_3440 NC_013421.1 3780547 3781317 D PFAM: methyltransferase type 11; methyltransferase small; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: eca:ECA3470 methyltransferase; methyltransferase type 11 3780547..3781317 Pectobacterium wasabiae WPP163 8531860 YP_003260785.1 CDS Pecwa_3441 NC_013421.1 3781588 3782322 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pct:PC1_3294 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3781588..3782322 Pectobacterium wasabiae WPP163 8531861 YP_003260786.1 CDS Pecwa_3442 NC_013421.1 3782293 3783060 R PFAM: glutamine amidotransferase class-II; KEGG: pct:PC1_3295 glutamine amidotransferase class-II; glutamine amidotransferase complement(3782293..3783060) Pectobacterium wasabiae WPP163 8531862 YP_003260787.1 CDS gmhA NC_013421.1 3783155 3783736 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(3783155..3783736) Pectobacterium wasabiae WPP163 8531863 YP_003260788.1 CDS fadE NC_013421.1 3784085 3786532 D functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 3784085..3786532 Pectobacterium wasabiae WPP163 8531864 YP_003260789.1 CDS Pecwa_3445 NC_013421.1 3786631 3786981 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: eca:ECA3475 hypothetical protein; hypothetical protein 3786631..3786981 Pectobacterium wasabiae WPP163 8531865 YP_003260790.1 CDS mtnK NC_013421.1 3787069 3788271 R phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase complement(3787069..3788271) Pectobacterium wasabiae WPP163 8531866 YP_003260791.1 CDS Pecwa_3447 NC_013421.1 3788424 3789452 D KEGG: pct:PC1_3300 translation initiation factor, aIF-2BI family; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 3788424..3789452 Pectobacterium wasabiae WPP163 8531867 YP_003260792.1 CDS Pecwa_3448 NC_013421.1 3789511 3789777 R PFAM: PAAR repeat-containing protein; KEGG: pct:PC1_2184 PaaR repeat-containing protein; PAAR repeat-containing protein complement(3789511..3789777) Pectobacterium wasabiae WPP163 8531868 YP_003260793.1 CDS Pecwa_3449 NC_013421.1 3789850 3790785 R KEGG: pct:PC1_2185 hypothetical protein; hypothetical protein complement(3789850..3790785) Pectobacterium wasabiae WPP163 8531869 YP_003260794.1 CDS Pecwa_3450 NC_013421.1 3790929 3791864 R KEGG: pct:PC1_2185 hypothetical protein; hypothetical protein complement(3790929..3791864) Pectobacterium wasabiae WPP163 8531870 YP_003260795.1 CDS Pecwa_3451 NC_013421.1 3792009 3792938 R KEGG: pct:PC1_2185 hypothetical protein; hypothetical protein complement(3792009..3792938) Pectobacterium wasabiae WPP163 8531871 YP_003260796.1 CDS Pecwa_3452 NC_013421.1 3792889 3794502 R KEGG: pct:PC1_2186 hypothetical protein; hypothetical protein complement(3792889..3794502) Pectobacterium wasabiae WPP163 8531872 YP_003260797.1 CDS Pecwa_3453 NC_013421.1 3794512 3795324 R KEGG: pct:PC1_2187 hypothetical protein; hypothetical protein complement(3794512..3795324) Pectobacterium wasabiae WPP163 8531873 YP_003260798.1 CDS Pecwa_3454 NC_013421.1 3795317 3797284 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: pct:PC1_2188 type VI secretion system Vgr family protein; ImpA family type VI secretion-associated protein complement(3795317..3797284) Pectobacterium wasabiae WPP163 8531874 YP_003260799.1 CDS Pecwa_3455 NC_013421.1 3797827 3798372 R PFAM: acireductone dioxygenase; KEGG: eca:ECA3485 oxidase; acireductone dioxygenase complement(3797827..3798372) Pectobacterium wasabiae WPP163 8531875 YP_003260800.1 CDS Pecwa_3456 NC_013421.1 3798369 3799058 R KEGG: pct:PC1_3302 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase complement(3798369..3799058) Pectobacterium wasabiae WPP163 8531876 YP_003260801.1 CDS Pecwa_3457 NC_013421.1 3799055 3799672 R catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; methylthioribulose-1-phosphate dehydratase complement(3799055..3799672) Pectobacterium wasabiae WPP163 8531877 YP_003260802.1 CDS Pecwa_3458 NC_013421.1 3799851 3801008 D catalyzes the transfer of an amino moiety; aminotransferase 3799851..3801008 Pectobacterium wasabiae WPP163 8531878 YP_003260803.1 CDS Pecwa_3459 NC_013421.1 3800996 3801763 D PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pct:PC1_3305 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; hypothetical protein 3800996..3801763 Pectobacterium wasabiae WPP163 8531879 YP_003260804.1 CDS Pecwa_3460 NC_013421.1 3801812 3802804 R KEGG: dps:DP3026 pyruvate formate-lyase activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; glycyl-radical enzyme activating protein family complement(3801812..3802804) Pectobacterium wasabiae WPP163 8531880 YP_003260805.1 CDS Pecwa_3461 NC_013421.1 3802812 3805292 R PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; KEGG: dde:Dde_1273 formate C-acetyltransferase; formate C-acetyltransferase complement(3802812..3805292) Pectobacterium wasabiae WPP163 8531881 YP_003260806.1 CDS Pecwa_3462 NC_013421.1 3805441 3806379 R KEGG: pfs:PFLU5857 aliphatic sulfonatesABC transporter, substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates ABC transporter periplasmic protein complement(3805441..3806379) Pectobacterium wasabiae WPP163 8531882 YP_003260807.1 CDS Pecwa_3463 NC_013421.1 3806788 3808116 D PFAM: aminotransferase class-III; KEGG: atc:AGR_L_2984 probable pyridoxal-dependent aminotransferase; class III aminotransferase 3806788..3808116 Pectobacterium wasabiae WPP163 8531883 YP_003260808.1 CDS Pecwa_3464 NC_013421.1 3808348 3809637 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(3808348..3809637) Pectobacterium wasabiae WPP163 8531884 YP_003260809.1 CDS Pecwa_3465 NC_013421.1 3809634 3810878 R PFAM: aminotransferase class V; KEGG: eca:ECA3491 purine catabolism protein; class V aminotransferase complement(3809634..3810878) Pectobacterium wasabiae WPP163 8531885 YP_003260810.1 CDS Pecwa_3466 NC_013421.1 3810928 3811671 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3492 amino acid ABC transporter ATP-binding protein; ABC transporter complement(3810928..3811671) Pectobacterium wasabiae WPP163 8531886 YP_003260811.1 CDS Pecwa_3467 NC_013421.1 3811652 3812305 R TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3493 amino acid ABC transporter permease protein; polar amino acid ABC transporter inner membrane protein complement(3811652..3812305) Pectobacterium wasabiae WPP163 8531887 YP_003260812.1 CDS Pecwa_3468 NC_013421.1 3812302 3812970 R TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3494 amino acid ABC transporter permease protein; polar amino acid ABC transporter inner membrane protein complement(3812302..3812970) Pectobacterium wasabiae WPP163 8531888 YP_003260813.1 CDS Pecwa_3469 NC_013421.1 3812983 3813789 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA3495 amino acid ABC transporter substrate binding protein; family 3 extracellular solute-binding protein complement(3812983..3813789) Pectobacterium wasabiae WPP163 8531889 YP_003260814.1 CDS Pecwa_3470 NC_013421.1 3814370 3815212 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: eca:ECA3496 transcriptional regulator; RpiR family transcriptional regulator complement(3814370..3815212) Pectobacterium wasabiae WPP163 8531890 YP_003260815.1 CDS Pecwa_3471 NC_013421.1 3815406 3816992 D PFAM: gamma-glutamyltranspeptidase; KEGG: eca:ECA3497 gamma-glutamyltranspeptidase; gamma-glutamyltransferase 3815406..3816992 Pectobacterium wasabiae WPP163 8531891 YP_003260816.1 CDS Pecwa_3472 NC_013421.1 3817018 3817224 D KEGG: eca:ECA3498 hypothetical protein; hypothetical protein 3817018..3817224 Pectobacterium wasabiae WPP163 8531892 YP_003260817.1 CDS Pecwa_3473 NC_013421.1 3817221 3818618 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3817221..3818618 Pectobacterium wasabiae WPP163 8531893 YP_003260818.1 CDS Pecwa_3474 NC_013421.1 3818630 3819016 D KEGG: eca:ECA3500 hypothetical protein; hypothetical protein 3818630..3819016 Pectobacterium wasabiae WPP163 8531894 YP_003260819.1 CDS Pecwa_3475 NC_013421.1 3819062 3819454 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eca:ECA3501 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3819062..3819454) Pectobacterium wasabiae WPP163 8531895 YP_003260820.1 CDS Pecwa_3476 NC_013421.1 3820124 3821326 D KEGG: eca:ECA3502 glycine betaine/L-proline transport ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; CBS domain containing protein; SMART: ATPase AAA; glycine betaine/L-proline ABC transporter ATPase 3820124..3821326 Pectobacterium wasabiae WPP163 8531896 YP_003260821.1 CDS Pecwa_3477 NC_013421.1 3821319 3822521 D with ProVX is involved in the high-affinity uptake of glycine betaine; glycine/betaine ABC transporter 3821319..3822521 Pectobacterium wasabiae WPP163 8531897 YP_003260822.1 CDS proX NC_013421.1 3822646 3823653 D with ProVW, part of the high-affinity transporter for the osmoprotectant glycine betaine; glycine/betaine ABC transporter periplasmic protein 3822646..3823653 Pectobacterium wasabiae WPP163 8531898 YP_003260823.1 CDS Pecwa_3479 NC_013421.1 3823757 3824647 R PFAM: alpha/beta hydrolase fold; KEGG: eca:ECA3505 hydrolase; alpha/beta hydrolase complement(3823757..3824647) Pectobacterium wasabiae WPP163 8531899 YP_003260824.1 CDS Pecwa_3480 NC_013421.1 3824739 3825320 D PFAM: protein of unknown function DUF1470; KEGG: pct:PC1_3324 hypothetical protein; hypothetical protein 3824739..3825320 Pectobacterium wasabiae WPP163 8531900 YP_003260825.1 CDS Pecwa_3481 NC_013421.1 3825458 3826618 R PFAM: Domain of unknown function DUF2394; KEGG: eca:ECA3507 hypothetical protein; 6-phosphogluconolactonase complement(3825458..3826618) Pectobacterium wasabiae WPP163 8531901 YP_003260826.1 CDS Pecwa_3482 NC_013421.1 3826779 3827999 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3508 transporter; major facilitator superfamily protein 3826779..3827999 Pectobacterium wasabiae WPP163 8531902 YP_003260827.1 CDS Pecwa_3483 NC_013421.1 3828184 3828915 D PFAM: AzlC family protein; KEGG: pct:PC1_3327 AzlC family protein; AzlC family protein 3828184..3828915 Pectobacterium wasabiae WPP163 8531903 YP_003260828.1 CDS Pecwa_3484 NC_013421.1 3828912 3829241 D PFAM: protein of unknown function DUF2598; KEGG: pct:PC1_3328 hypothetical protein; hypothetical protein 3828912..3829241 Pectobacterium wasabiae WPP163 8531904 YP_003260829.1 CDS Pecwa_3485 NC_013421.1 3829431 3829946 D DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA 3829431..3829946 Pectobacterium wasabiae WPP163 8531905 YP_003260830.1 CDS Pecwa_3486 NC_013421.1 3830212 3831387 D TIGRFAM: efflux pump membrane protein; PFAM: hypothetical protein family protein; KEGG: eca:ECA3512 multidrug resistance protein A; efflux pump membrane protein 3830212..3831387 Pectobacterium wasabiae WPP163 8531906 YP_003260831.1 CDS Pecwa_3487 NC_013421.1 3831405 3832940 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3513 multidrug resistance protein B; EmrB/QacA subfamily drug resistance transporter 3831405..3832940 Pectobacterium wasabiae WPP163 8531907 YP_003260832.1 CDS Pecwa_3489 NC_013421.1 3833498 3833947 R KEGG: eca:ECA3515 lipoprotein; lipoprotein complement(3833498..3833947) Pectobacterium wasabiae WPP163 8531909 YP_003260833.1 CDS Pecwa_3490 NC_013421.1 3834016 3835167 R PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: eca:ECA3516 methyltransferase; methyltransferase complement(3834016..3835167) Pectobacterium wasabiae WPP163 8531910 YP_003260834.1 CDS Pecwa_3491 NC_013421.1 3835417 3835836 D TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: pct:PC1_3335 thioredoxin; thioredoxin 3835417..3835836 Pectobacterium wasabiae WPP163 8531911 YP_003260835.1 CDS Pecwa_3492 NC_013421.1 3835972 3836706 D PFAM: DTW domain containing protein; KEGG: eca:ECA3518 hypothetical protein; DTW domain containing protein 3835972..3836706 Pectobacterium wasabiae WPP163 8531912 YP_003260836.1 CDS Pecwa_3493 NC_013421.1 3836739 3839387 D PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: pct:PC1_3337 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3836739..3839387 Pectobacterium wasabiae WPP163 8531913 YP_003260837.1 CDS pssA NC_013421.1 3839576 3840931 D catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 3839576..3840931 Pectobacterium wasabiae WPP163 8531914 YP_003260838.1 CDS Pecwa_3495 NC_013421.1 3840994 3841317 D KEGG: pct:PC1_3339 hypothetical protein; hypothetical protein 3840994..3841317 Pectobacterium wasabiae WPP163 8531915 YP_003260839.1 CDS Pecwa_3496 NC_013421.1 3841314 3842594 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: pct:PC1_3340 metabolite/H+ symporter, major facilitator superfamily (MFS); alpha-ketoglutarate transporter complement(3841314..3842594) Pectobacterium wasabiae WPP163 8531916 YP_003260840.1 CDS Pecwa_3497 NC_013421.1 3848601 3848738 D hypothetical protein 3848601..3848738 Pectobacterium wasabiae WPP163 8531923 YP_003260841.1 CDS Pecwa_3498 NC_013421.1 3848781 3849344 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(3848781..3849344) Pectobacterium wasabiae WPP163 8531924 YP_003260842.1 CDS metN NC_013421.1 3849525 3850556 D part of the metNIQ transporter for methionine; DL-methionine transporter ATP-binding subunit 3849525..3850556 Pectobacterium wasabiae WPP163 8531925 YP_003260843.1 CDS Pecwa_3500 NC_013421.1 3850549 3851202 D part of the MetNIQ methionine uptake system; DL-methionine transporter permease 3850549..3851202 Pectobacterium wasabiae WPP163 8531926 YP_003260844.1 CDS metQ NC_013421.1 3851266 3852081 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: pct:PC1_3344 lipoprotein, YaeC family; DL-methionine transporter substrate-binding subunit 3851266..3852081 Pectobacterium wasabiae WPP163 8531927 YP_003260845.1 CDS rcsF NC_013421.1 3852200 3852610 D KEGG: eca:ECA3527 outer membrane lipoprotein; outer membrane lipoprotein 3852200..3852610 Pectobacterium wasabiae WPP163 8531928 YP_003260846.1 CDS Pecwa_3503 NC_013421.1 3852607 3853323 D PFAM: protein of unknown function UPF0066; KEGG: eca:ECA3528 hypothetical protein; hypothetical protein 3852607..3853323 Pectobacterium wasabiae WPP163 8531929 YP_003260847.1 CDS Pecwa_3504 NC_013421.1 3853469 3855187 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3853469..3855187 Pectobacterium wasabiae WPP163 8531930 YP_003260848.1 CDS Pecwa_3505 NC_013421.1 3855294 3856286 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS complement(3855294..3856286) Pectobacterium wasabiae WPP163 8531931 YP_003260849.1 CDS nlpD NC_013421.1 3856340 3857377 R outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; lipoprotein NlpD complement(3856340..3857377) Pectobacterium wasabiae WPP163 8531932 YP_003260850.1 CDS pcm NC_013421.1 3857836 3858462 R catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase complement(3857836..3858462) Pectobacterium wasabiae WPP163 8531933 YP_003260851.1 CDS truD NC_013421.1 3858598 3859644 R catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D complement(3858598..3859644) Pectobacterium wasabiae WPP163 8531934 YP_003260852.1 CDS ispF NC_013421.1 3859748 3860245 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(3859748..3860245) Pectobacterium wasabiae WPP163 8531935 YP_003260853.1 CDS ispD NC_013421.1 3860297 3861010 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(3860297..3861010) Pectobacterium wasabiae WPP163 8531936 YP_003260854.1 CDS ftsB NC_013421.1 3861014 3861349 R forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB complement(3861014..3861349) Pectobacterium wasabiae WPP163 8531937 YP_003260855.1 CDS Pecwa_3512 NC_013421.1 3861704 3862474 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: pct:PC1_3355 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3861704..3862474 Pectobacterium wasabiae WPP163 8531938 YP_003260856.1 CDS Pecwa_3513 NC_013421.1 3862609 3863373 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3538 amino acid ABC transporter; polar amino acid ABC transporter inner membrane protein 3862609..3863373 Pectobacterium wasabiae WPP163 8531939 YP_003260857.1 CDS Pecwa_3514 NC_013421.1 3863360 3864082 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3539 amino acid ABC transporter ATP-binding protein; ABC transporter 3863360..3864082 Pectobacterium wasabiae WPP163 8531940 YP_003260858.1 CDS Pecwa_3515 NC_013421.1 3864155 3864499 R KEGG: pct:PC1_3358 hypothetical protein; hypothetical protein complement(3864155..3864499) Pectobacterium wasabiae WPP163 8531941 YP_003260859.1 CDS Pecwa_3516 NC_013421.1 3864546 3865163 R converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase complement(3864546..3865163) Pectobacterium wasabiae WPP163 8531942 YP_003260860.1 CDS cysN NC_013421.1 3865165 3866655 R may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 complement(3865165..3866655) Pectobacterium wasabiae WPP163 8531943 YP_003260861.1 CDS Pecwa_3518 NC_013421.1 3866667 3867575 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(3866667..3867575) Pectobacterium wasabiae WPP163 8531944 YP_003260862.1 CDS Pecwa_3519 NC_013421.1 3867585 3869027 R TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain; KEGG: pct:PC1_3362 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase complement(3867585..3869027) Pectobacterium wasabiae WPP163 8531945 YP_003260863.1 CDS Pecwa_3520 NC_013421.1 3869442 3869885 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: pct:PC1_1952 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 3869442..3869885 Pectobacterium wasabiae WPP163 8531946 YP_003260864.1 CDS Pecwa_3521 NC_013421.1 3869899 3870204 D PFAM: phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: vsa:VSAL_I0704 PTS system, cellobiose-specific component IIB; PTS system lactose/cellobiose-specific transporter subunit IIB 3869899..3870204 Pectobacterium wasabiae WPP163 8531947 YP_003260865.1 CDS Pecwa_3522 NC_013421.1 3870206 3871504 D KEGG: vvy:VV2900 phosphotransferase system cellobiose-specific component IIC; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 3870206..3871504 Pectobacterium wasabiae WPP163 8531948 YP_003260866.1 CDS Pecwa_3523 NC_013421.1 3871523 3872920 D PFAM: glycoside hydrolase family 1; KEGG: spe:Spro_4221 beta-glucosidase; beta-glucosidase 3871523..3872920 Pectobacterium wasabiae WPP163 8531949 YP_003260867.1 CDS Pecwa_3524 NC_013421.1 3873014 3874024 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: vfm:VFMJ11_0622 HTH-type transcriptional regulator AscG; LacI family transcriptional regulator 3873014..3874024 Pectobacterium wasabiae WPP163 8531950 YP_003260868.1 CDS Pecwa_3525 NC_013421.1 3874210 3874944 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(3874210..3874944) Pectobacterium wasabiae WPP163 8531951 YP_003260869.1 CDS Pecwa_3526 NC_013421.1 3874957 3876690 R hemoprotein; NADPH dependent; with the subunit alpha (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta complement(3874957..3876690) Pectobacterium wasabiae WPP163 8531952 YP_003260870.1 CDS cysJ NC_013421.1 3876690 3878519 R catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity; sulfite reductase subunit alpha complement(3876690..3878519) Pectobacterium wasabiae WPP163 8531953 YP_003260871.1 CDS Pecwa_3528 NC_013421.1 3878798 3880522 R PFAM: type IV pilus assembly PilZ; KEGG: eca:ECA3548 hypothetical protein; metal dependent phosphohydrolase complement(3878798..3880522) Pectobacterium wasabiae WPP163 8531954 YP_003260872.1 CDS Pecwa_3529 NC_013421.1 3881049 3881789 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: pct:PC1_3367 diguanylate phosphodiesterase; diguanylate phosphodiesterase 3881049..3881789 Pectobacterium wasabiae WPP163 8531955 YP_003260873.1 CDS Pecwa_3530 NC_013421.1 3882070 3882432 D PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: pct:PC1_3372 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; 6-pyruvoyl-tetrahydropterin synthase 3882070..3882432 Pectobacterium wasabiae WPP163 8531956 YP_003260874.1 CDS Pecwa_3531 NC_013421.1 3882474 3883145 R KEGG: pct:PC1_3374 hypothetical protein; hypothetical protein complement(3882474..3883145) Pectobacterium wasabiae WPP163 8531957 YP_003260875.1 CDS Pecwa_3532 NC_013421.1 3883519 3884502 D PFAM: beta-lactamase; KEGG: eca:ECA3555 metallo hydrolase; beta-lactamase 3883519..3884502 Pectobacterium wasabiae WPP163 8531958 YP_003260876.1 CDS Pecwa_3533 NC_013421.1 3885051 3887228 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: pay:PAU_00969 hypothetical protein; ImpA family type VI secretion-associated protein 3885051..3887228 Pectobacterium wasabiae WPP163 8531959 YP_003260877.1 CDS Pecwa_3534 NC_013421.1 3887221 3888570 D PFAM: VRR-NUC domain protein; KEGG: plu:plu1493 hypothetical protein; VRR-NUC domain-containing protein 3887221..3888570 Pectobacterium wasabiae WPP163 8531960 YP_003260878.1 CDS Pecwa_3535 NC_013421.1 3888589 3889746 D KEGG: pay:PAU_03662 hypothetical protein; hypothetical protein 3888589..3889746 Pectobacterium wasabiae WPP163 8531961 YP_003260879.1 CDS Pecwa_3536 NC_013421.1 3889724 3889816 D hypothetical protein 3889724..3889816 Pectobacterium wasabiae WPP163 8531962 YP_003260880.1 CDS Pecwa_3537 NC_013421.1 3889844 3891193 D PFAM: VRR-NUC domain protein; KEGG: plu:plu1493 hypothetical protein; VRR-NUC domain-containing protein 3889844..3891193 Pectobacterium wasabiae WPP163 8531963 YP_003260881.1 CDS Pecwa_3538 NC_013421.1 3891212 3892366 D KEGG: pay:PAU_03662 hypothetical protein; hypothetical protein 3891212..3892366 Pectobacterium wasabiae WPP163 8531964 YP_003260882.1 CDS Pecwa_3539 NC_013421.1 3892375 3893529 D KEGG: pay:PAU_03662 hypothetical protein; hypothetical protein 3892375..3893529 Pectobacterium wasabiae WPP163 8531965 YP_003260883.1 CDS Pecwa_3540 NC_013421.1 3893526 3893795 D KEGG: pmr:PMI2995 hypothetical protein; hypothetical protein 3893526..3893795 Pectobacterium wasabiae WPP163 8531966 YP_003260884.1 CDS Pecwa_3541 NC_013421.1 3893863 3895002 R PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein; glycosyl hydrolase family protein complement(3893863..3895002) Pectobacterium wasabiae WPP163 8531967 YP_003260885.1 CDS Pecwa_3542 NC_013421.1 3895046 3896605 R KEGG: eca:ECA3560 oligogalacturonide transporter; oligogalacturonide transporter complement(3895046..3896605) Pectobacterium wasabiae WPP163 8531968 YP_003260886.1 CDS Pecwa_3543 NC_013421.1 3896922 3897998 R PFAM: periplasmic binding protein; KEGG: pct:PC1_3384 periplasmic binding protein; periplasmic binding protein complement(3896922..3897998) Pectobacterium wasabiae WPP163 8531969 YP_003260887.1 CDS Pecwa_3544 NC_013421.1 3898004 3900187 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pct:PC1_3385 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(3898004..3900187) Pectobacterium wasabiae WPP163 8531970 YP_003260888.1 CDS eno NC_013421.1 3900601 3901896 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(3900601..3901896) Pectobacterium wasabiae WPP163 8531971 YP_003260889.1 CDS pyrG NC_013421.1 3901995 3903632 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(3901995..3903632) Pectobacterium wasabiae WPP163 8531972 YP_003260890.1 CDS mazG NC_013421.1 3903859 3904671 R functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase complement(3903859..3904671) Pectobacterium wasabiae WPP163 8531973 YP_003260891.1 CDS relA NC_013421.1 3905060 3907297 R (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase complement(3905060..3907297) Pectobacterium wasabiae WPP163 8531974 YP_003260892.1 CDS rumA NC_013421.1 3907350 3908699 R in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase complement(3907350..3908699) Pectobacterium wasabiae WPP163 8531975 YP_003260893.1 CDS Pecwa_3550 NC_013421.1 3908815 3911601 D part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 3908815..3911601 Pectobacterium wasabiae WPP163 8531976 YP_003260894.1 CDS Pecwa_3551 NC_013421.1 3911684 3912847 R KEGG: pct:PC1_3392 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; glycerate kinase complement(3911684..3912847) Pectobacterium wasabiae WPP163 8531977 YP_003260895.1 CDS Pecwa_3552 NC_013421.1 3912844 3912990 R hypothetical protein complement(3912844..3912990) Pectobacterium wasabiae WPP163 8531978 YP_003260896.1 CDS garR NC_013421.1 3913024 3913908 R catalyzes the reduction of tartronate semialdehyde to glycerate; tartronate semialdehyde reductase complement(3913024..3913908) Pectobacterium wasabiae WPP163 8531979 YP_003260897.1 CDS Pecwa_3554 NC_013421.1 3913999 3914769 R cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; alpha-dehydro-beta-deoxy-D-glucarate aldolase complement(3913999..3914769) Pectobacterium wasabiae WPP163 8531980 YP_003260898.1 CDS Pecwa_3555 NC_013421.1 3914839 3916179 R KEGG: eca:ECA3575 glucarate dehydratase; TIGRFAM: glucarate dehydratase; PFAM: mandelate racemase/muconate lactonizing protein; glucarate dehydratase complement(3914839..3916179) Pectobacterium wasabiae WPP163 8531981 YP_003260899.1 CDS Pecwa_3556 NC_013421.1 3916216 3917568 R PFAM: mandelate racemase/muconate lactonizing protein; KEGG: pct:PC1_3396 glucarate dehydratase; glucarate dehydratase complement(3916216..3917568) Pectobacterium wasabiae WPP163 8531982 YP_003260900.1 CDS Pecwa_3557 NC_013421.1 3918173 3919525 R TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA3577 glucarate transporter; d-galactonate transporter complement(3918173..3919525) Pectobacterium wasabiae WPP163 8531983 YP_003260901.1 CDS Pecwa_3558 NC_013421.1 3920192 3921766 D KEGG: eca:ECA3578 D-galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase 3920192..3921766 Pectobacterium wasabiae WPP163 8531984 YP_003260902.1 CDS Pecwa_3559 NC_013421.1 3922632 3924167 D KEGG: eca:ECA3579 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 3922632..3924167 Pectobacterium wasabiae WPP163 8531985 YP_003260903.1 CDS Pecwa_3560 NC_013421.1 3924400 3924756 D KEGG: eca:ECA3581 hypothetical protein; hypothetical protein 3924400..3924756 Pectobacterium wasabiae WPP163 8531986 YP_003260904.1 CDS Pecwa_3561 NC_013421.1 3924961 3925182 R KEGG: eca:ECA3582 hypothetical protein; hypothetical protein complement(3924961..3925182) Pectobacterium wasabiae WPP163 8531987 YP_003260905.1 CDS ligA NC_013421.1 3925187 3927232 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(3925187..3927232) Pectobacterium wasabiae WPP163 8531988 YP_003260906.1 CDS Pecwa_3563 NC_013421.1 3927378 3928814 R catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(3927378..3928814) Pectobacterium wasabiae WPP163 8531989 YP_003260907.1 CDS Pecwa_3564 NC_013421.1 3929069 3931924 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(3929069..3931924) Pectobacterium wasabiae WPP163 8531990 YP_003260908.1 CDS Pecwa_3565 NC_013421.1 3931977 3933308 R PFAM: adenylate cyclase; KEGG: eca:ECA3586 hypothetical protein; adenylate cyclase complement(3931977..3933308) Pectobacterium wasabiae WPP163 8531991 YP_003260909.1 CDS Pecwa_3566 NC_013421.1 3933596 3934216 D SMART: SH3 domain protein; KEGG: eca:ECA3587 signal transduction protein; signal transduction protein 3933596..3934216 Pectobacterium wasabiae WPP163 8531992 YP_003260910.1 CDS cca NC_013421.1 3934325 3935569 D catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3934325..3935569 Pectobacterium wasabiae WPP163 8531993 YP_003260911.1 CDS Pecwa_3568 NC_013421.1 3935622 3936440 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(3935622..3936440) Pectobacterium wasabiae WPP163 8531994 YP_003260912.1 CDS folB NC_013421.1 3936588 3936941 R catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase complement(3936588..3936941) Pectobacterium wasabiae WPP163 8531995 YP_003260913.1 CDS Pecwa_3570 NC_013421.1 3937049 3937684 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 3937049..3937684 Pectobacterium wasabiae WPP163 8531996 YP_003260914.1 CDS Pecwa_3571 NC_013421.1 3937841 3939427 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3592 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3937841..3939427) Pectobacterium wasabiae WPP163 8531997 YP_003260915.1 CDS Pecwa_3572 NC_013421.1 3939676 3940206 D catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 3939676..3940206 Pectobacterium wasabiae WPP163 8531998 YP_003260916.1 CDS Pecwa_3573 NC_013421.1 3940322 3940669 R PFAM: AIG2 family protein; KEGG: pct:PC1_3414 AIG2 family protein; AIG2 family protein complement(3940322..3940669) Pectobacterium wasabiae WPP163 8531999 YP_003260917.1 CDS Pecwa_3574 NC_013421.1 3940672 3944700 R PFAM: protein of unknown function DUF490; KEGG: pct:PC1_3415 hypothetical protein; hypothetical protein complement(3940672..3944700) Pectobacterium wasabiae WPP163 8532000 YP_003260918.1 CDS Pecwa_3575 NC_013421.1 3944697 3946412 R PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: pct:PC1_3416 surface antigen (D15); surface antigen (D15) complement(3944697..3946412) Pectobacterium wasabiae WPP163 8532001 YP_003260919.1 CDS Pecwa_3576 NC_013421.1 3947028 3947666 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 3947028..3947666 Pectobacterium wasabiae WPP163 8532002 YP_003260920.1 CDS Pecwa_3577 NC_013421.1 3947839 3949164 D PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: pct:PC1_3418 hypothetical protein; hypothetical protein 3947839..3949164 Pectobacterium wasabiae WPP163 8532003 YP_003260921.1 CDS Pecwa_3578 NC_013421.1 3949224 3949430 R PFAM: protein of unknown function DUF1107; KEGG: pct:PC1_3419 hypothetical protein; hypothetical protein complement(3949224..3949430) Pectobacterium wasabiae WPP163 8532004 YP_003260922.1 CDS Pecwa_3579 NC_013421.1 3949777 3950355 D PFAM: conserved hypothetical protein; KEGG: pct:PC1_3420 hypothetical protein; hypothetical protein 3949777..3950355 Pectobacterium wasabiae WPP163 8532005 YP_003260923.1 CDS Pecwa_3580 NC_013421.1 3950358 3951098 R catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; adenosine-3'(2'),5'-bisphosphate nucleotidase complement(3950358..3951098) Pectobacterium wasabiae WPP163 8532006 YP_003260924.1 CDS cpdB NC_013421.1 3951304 3953256 D periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein 3951304..3953256 Pectobacterium wasabiae WPP163 8532007 YP_003260925.1 CDS Pecwa_3582 NC_013421.1 3953443 3953997 D PFAM: flavodoxin/nitric oxide synthase; KEGG: pct:PC1_3424 flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 3953443..3953997 Pectobacterium wasabiae WPP163 8532008 YP_003260926.1 CDS Pecwa_3583 NC_013421.1 3954051 3954473 R PFAM: protein of unknown function DUF2502; KEGG: pct:PC1_3425 hypothetical protein; hypothetical protein complement(3954051..3954473) Pectobacterium wasabiae WPP163 8532009 YP_003260927.1 CDS Pecwa_3584 NC_013421.1 3954819 3955484 D Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein 3954819..3955484 Pectobacterium wasabiae WPP163 8532010 YP_003260928.1 CDS Pecwa_3585 NC_013421.1 3955562 3956182 R FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase complement(3955562..3956182) Pectobacterium wasabiae WPP163 8532011 YP_003260929.1 CDS Pecwa_3586 NC_013421.1 3956185 3956319 D KEGG: pct:PC1_3429 hypothetical protein; hypothetical protein 3956185..3956319 Pectobacterium wasabiae WPP163 8532012 YP_003260930.1 CDS Pecwa_3587 NC_013421.1 3956455 3957168 D PFAM: Opacity-associated protein A; Opacity-associated protein A domain protein; KEGG: pct:PC1_3430 opacity-associated protein A; Opacity-associated protein A 3956455..3957168 Pectobacterium wasabiae WPP163 8532013 YP_003260931.1 CDS Pecwa_3588 NC_013421.1 3957165 3957527 R PFAM: protein of unknown function DUF488; KEGG: pct:PC1_3431 hypothetical protein; hypothetical protein complement(3957165..3957527) Pectobacterium wasabiae WPP163 8532014 YP_003260932.1 CDS rplI NC_013421.1 3957654 3958106 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(3957654..3958106) Pectobacterium wasabiae WPP163 8532015 YP_003260933.1 CDS rpsR NC_013421.1 3958148 3958375 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(3958148..3958375) Pectobacterium wasabiae WPP163 8532016 YP_003260934.1 CDS Pecwa_3591 NC_013421.1 3958380 3958700 R binds single-stranded DNA at the primosome assembly site; primosomal replication protein N complement(3958380..3958700) Pectobacterium wasabiae WPP163 8532017 YP_003260935.1 CDS rpsF NC_013421.1 3958706 3959098 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(3958706..3959098) Pectobacterium wasabiae WPP163 8532018 YP_003260936.1 CDS Pecwa_3593 NC_013421.1 3959280 3960032 R YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase complement(3959280..3960032) Pectobacterium wasabiae WPP163 8532019 YP_003260937.1 CDS Pecwa_3594 NC_013421.1 3960328 3962268 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3615 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3960328..3962268 Pectobacterium wasabiae WPP163 8532020 YP_003260938.1 CDS Pecwa_3595 NC_013421.1 3962265 3962426 R hypothetical protein complement(3962265..3962426) Pectobacterium wasabiae WPP163 8532021 YP_003260939.1 CDS Pecwa_3596 NC_013421.1 3962553 3963674 D mutations in this gene result in a compromised ability for drug-inducible mexXY expression; expression is inducible by the same ribosome-targeting agents that induce mexXY; hypothetical protein 3962553..3963674 Pectobacterium wasabiae WPP163 8532022 YP_003260940.1 CDS prfH NC_013421.1 3963671 3964294 D similar to release factor 1 and 2; peptide chain release factor-like protein 3963671..3964294 Pectobacterium wasabiae WPP163 8532023 YP_003260941.1 CDS Pecwa_3598 NC_013421.1 3964302 3964403 R hypothetical protein complement(3964302..3964403) Pectobacterium wasabiae WPP163 8532024 YP_003260942.1 CDS Pecwa_3599 NC_013421.1 3964381 3964779 R PFAM: protein of unknown function DUF350; KEGG: pct:PC1_3442 hypothetical protein; hypothetical protein complement(3964381..3964779) Pectobacterium wasabiae WPP163 8532025 YP_003260943.1 CDS Pecwa_3600 NC_013421.1 3965135 3966667 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pct:PC1_3443 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3965135..3966667 Pectobacterium wasabiae WPP163 8532026 YP_003260944.1 CDS Pecwa_3601 NC_013421.1 3966723 3967454 R Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase complement(3966723..3967454) Pectobacterium wasabiae WPP163 8532027 YP_003260945.1 CDS Pecwa_3602 NC_013421.1 3967556 3970012 R 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; exoribonuclease R complement(3967556..3970012) Pectobacterium wasabiae WPP163 8532028 YP_003260946.1 CDS Pecwa_3603 NC_013421.1 3970054 3970479 R negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR complement(3970054..3970479) Pectobacterium wasabiae WPP163 8532029 YP_003260947.1 CDS Pecwa_3604 NC_013421.1 3970768 3972339 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pct:PC1_3447 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3970768..3972339 Pectobacterium wasabiae WPP163 8532030 YP_003260948.1 CDS Pecwa_3605 NC_013421.1 3972844 3974676 D KEGG: eca:ECA3625 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; hypothetical protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 3972844..3974676 Pectobacterium wasabiae WPP163 8532031 YP_003260949.1 CDS Pecwa_3606 NC_013421.1 3974645 3975661 R KEGG: eca:ECA3626 type II/IV secretion system protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA; twitching motility protein complement(3974645..3975661) Pectobacterium wasabiae WPP163 8532032 YP_003260950.1 CDS Pecwa_3607 NC_013421.1 3975683 3976396 D PFAM: alanine racemase domain protein; KEGG: pct:PC1_3450 alanine racemase domain protein; alanine racemase 3975683..3976396 Pectobacterium wasabiae WPP163 8532033 YP_003260951.1 CDS Pecwa_3608 NC_013421.1 3976473 3977294 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3976473..3977294 Pectobacterium wasabiae WPP163 8532034 YP_003260952.1 CDS Pecwa_3609 NC_013421.1 3977344 3977913 D PFAM: protein of unknown function YGGT; KEGG: pct:PC1_3452 hypothetical protein; hypothetical protein 3977344..3977913 Pectobacterium wasabiae WPP163 8532035 YP_003260953.1 CDS Pecwa_3610 NC_013421.1 3977910 3978200 D PFAM: protein of unknown function DUF167; KEGG: pct:PC1_3453 hypothetical protein; hypothetical protein 3977910..3978200 Pectobacterium wasabiae WPP163 8532036 YP_003260954.1 CDS Pecwa_3611 NC_013421.1 3978218 3978811 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 3978218..3978811 Pectobacterium wasabiae WPP163 8532037 YP_003260955.1 CDS Pecwa_3612 NC_013421.1 3978804 3979943 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3978804..3979943 Pectobacterium wasabiae WPP163 8532038 YP_003260956.1 CDS Pecwa_3613 NC_013421.1 3980305 3980874 D PFAM: phosphoglycerate mutase; KEGG: ent:Ent638_2024 phosphoglycerate mutase; phosphoglycerate mutase 3980305..3980874 Pectobacterium wasabiae WPP163 8532039 YP_003260957.1 CDS Pecwa_3614 NC_013421.1 3981108 3981239 D PFAM: entericidin EcnAB; KEGG: eca:ECA3638 entericidin A precursor; entericidin EcnAB 3981108..3981239 Pectobacterium wasabiae WPP163 8532040 YP_003260958.1 CDS Pecwa_3615 NC_013421.1 3981334 3981789 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3639 acyltransferase; N-acetyltransferase GCN5 complement(3981334..3981789) Pectobacterium wasabiae WPP163 8532041 YP_003260959.1 CDS Pecwa_3616 NC_013421.1 3981801 3983024 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3640 lysophospholipid transporter LplT; lysophospholipid transporter LplT complement(3981801..3983024) Pectobacterium wasabiae WPP163 8532042 YP_003260960.1 CDS Pecwa_3617 NC_013421.1 3983030 3985207 R transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase complement(3983030..3985207) Pectobacterium wasabiae WPP163 8532043 YP_003260961.1 CDS Pecwa_3618 NC_013421.1 3985851 3987506 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pct:PC1_3464 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3985851..3987506 Pectobacterium wasabiae WPP163 8532044 YP_003260962.1 CDS Pecwa_3619 NC_013421.1 3987872 3988324 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3643 GnaT-family acetyltransferase; N-acetyltransferase GCN5 complement(3987872..3988324) Pectobacterium wasabiae WPP163 8532045 YP_003260963.1 CDS Pecwa_3620 NC_013421.1 3988625 3989638 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pct:PC1_3471 LacI family transcriptional regulator; LacI family transcriptional regulator 3988625..3989638 Pectobacterium wasabiae WPP163 8532046 YP_003260964.1 CDS Pecwa_3621 NC_013421.1 3989700 3990854 R regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; carbohydrate diacid transcriptional activator CdaR complement(3989700..3990854) Pectobacterium wasabiae WPP163 8532047 YP_003260965.1 CDS Pecwa_3622 NC_013421.1 3991180 3992622 R KEGG: kpn:KPN_02369 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta; pyruvate kinase complement(3991180..3992622) Pectobacterium wasabiae WPP163 8532048 YP_003260966.1 CDS Pecwa_3623 NC_013421.1 3992720 3993880 R KEGG: vfi:VF_2157 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; glycerate kinase complement(3992720..3993880) Pectobacterium wasabiae WPP163 8532049 YP_003260967.1 CDS Pecwa_3624 NC_013421.1 3993890 3995194 R PFAM: gluconate transporter; citrate transporter; KEGG: ypg:YpAngola_A4082 gluconate:H+ symporter (GntP) family protein; gluconate transporter complement(3993890..3995194) Pectobacterium wasabiae WPP163 8532050 YP_003260968.1 CDS Pecwa_3625 NC_013421.1 3995664 3996926 R catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase complement(3995664..3996926) Pectobacterium wasabiae WPP163 8532051 YP_003260969.1 CDS Pecwa_3626 NC_013421.1 3997048 3997968 D activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; LysR family transcriptional regulator 3997048..3997968 Pectobacterium wasabiae WPP163 8532052 YP_003260970.1 CDS Pecwa_3627 NC_013421.1 3997980 3998897 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_3488 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3997980..3998897) Pectobacterium wasabiae WPP163 8532053 YP_003260971.1 CDS Pecwa_3628 NC_013421.1 3999005 3999886 D PFAM: beta-lactamase; KEGG: eca:ECA3655 hypothetical protein; beta-lactamase 3999005..3999886 Pectobacterium wasabiae WPP163 8532054 YP_003260972.1 CDS Pecwa_3629 NC_013421.1 3999874 4000530 D KEGG: eca:ECA3656 hypothetical protein; hypothetical protein 3999874..4000530 Pectobacterium wasabiae WPP163 8532055 YP_003260973.1 CDS Pecwa_3630 NC_013421.1 4000821 4001114 D KEGG: eca:ECA3657 hypothetical protein; hypothetical protein 4000821..4001114 Pectobacterium wasabiae WPP163 8532056 YP_003260974.1 CDS Pecwa_3631 NC_013421.1 4001311 4002333 D TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase; KEGG: eca:ECA3660 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A 4001311..4002333 Pectobacterium wasabiae WPP163 8532057 YP_003260975.1 CDS pspG NC_013421.1 4002500 4002772 D coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G 4002500..4002772 Pectobacterium wasabiae WPP163 8532058 YP_003260976.1 CDS Pecwa_3633 NC_013421.1 4002871 4003086 R hypothetical protein complement(4002871..4003086) Pectobacterium wasabiae WPP163 8532059 YP_003260977.1 CDS Pecwa_3634 NC_013421.1 4003251 4004639 R PFAM: cytochrome P450; KEGG: eca:ECA3662 cytochrome; cytochrome P450 complement(4003251..4004639) Pectobacterium wasabiae WPP163 8532060 YP_003260978.1 CDS Pecwa_3635 NC_013421.1 4004971 4005957 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: eca:ECA3663 quinone oxidoreductase, NADPH-dependent; quinone oxidoreductase complement(4004971..4005957) Pectobacterium wasabiae WPP163 8532061 YP_003260979.1 CDS Pecwa_3636 NC_013421.1 4006085 4007491 D unwinds double stranded DNA; replicative DNA helicase 4006085..4007491 Pectobacterium wasabiae WPP163 8532062 YP_003260980.1 CDS alr NC_013421.1 4007533 4008612 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 4007533..4008612 Pectobacterium wasabiae WPP163 8532063 YP_003260981.1 CDS Pecwa_3639 NC_013421.1 4008788 4009438 D KEGG: eca:ECA3666 hypothetical protein; hypothetical protein 4008788..4009438 Pectobacterium wasabiae WPP163 8532065 YP_003260982.1 CDS Pecwa_3640 NC_013421.1 4010775 4011254 D PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type; KEGG: pct:PC1_3502 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 4010775..4011254 Pectobacterium wasabiae WPP163 8532066 YP_003260983.1 CDS Pecwa_3641 NC_013421.1 4011506 4012120 D PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein; hypothetical protein 4011506..4012120 Pectobacterium wasabiae WPP163 8532067 YP_003260984.1 CDS Pecwa_3642 NC_013421.1 4012184 4013377 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 4012184..4013377 Pectobacterium wasabiae WPP163 8532068 YP_003260985.1 CDS Pecwa_3643 NC_013421.1 4013511 4014014 D PFAM: protein of unknown function DUF45; KEGG: eca:ECA3671 hypothetical protein; hypothetical protein 4013511..4014014 Pectobacterium wasabiae WPP163 8532069 YP_003260986.1 CDS Pecwa_3644 NC_013421.1 4014133 4014612 D TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: pct:PC1_3506 type VI secretion system effector, Hcp1 family; type VI secretion system effector 4014133..4014612 Pectobacterium wasabiae WPP163 8532070 YP_003260987.1 CDS Pecwa_3645 NC_013421.1 4014665 4015102 R PFAM: protein of unknown function DUF1240; KEGG: ypn:YPN_1051 hypothetical protein; hypothetical protein complement(4014665..4015102) Pectobacterium wasabiae WPP163 8532071 YP_003260988.1 CDS Pecwa_3646 NC_013421.1 4015116 4015520 R PFAM: protein of unknown function DUF1240; KEGG: pct:PC1_3507 hypothetical protein; hypothetical protein complement(4015116..4015520) Pectobacterium wasabiae WPP163 8532072 YP_003260989.1 CDS Pecwa_3647 NC_013421.1 4015572 4015979 R PFAM: protein of unknown function DUF1240; KEGG: eca:ECA3674 hypothetical protein; hypothetical protein complement(4015572..4015979) Pectobacterium wasabiae WPP163 8532073 YP_003260990.1 CDS Pecwa_3648 NC_013421.1 4016027 4016431 R PFAM: protein of unknown function DUF1240; KEGG: pct:PC1_3508 hypothetical protein; hypothetical protein complement(4016027..4016431) Pectobacterium wasabiae WPP163 8532074 YP_003260991.1 CDS Pecwa_3649 NC_013421.1 4016479 4016883 R PFAM: protein of unknown function DUF1240; KEGG: pct:PC1_3507 hypothetical protein; hypothetical protein complement(4016479..4016883) Pectobacterium wasabiae WPP163 8532075 YP_003260992.1 CDS Pecwa_3650 NC_013421.1 4016935 4017342 R PFAM: protein of unknown function DUF1240; KEGG: yps:YPTB1065 hypothetical protein; hypothetical protein complement(4016935..4017342) Pectobacterium wasabiae WPP163 8532076 YP_003260993.1 CDS Pecwa_3651 NC_013421.1 4017389 4017817 R PFAM: protein of unknown function DUF1240; KEGG: ypn:YPN_1051 hypothetical protein; hypothetical protein complement(4017389..4017817) Pectobacterium wasabiae WPP163 8532077 YP_003260994.1 CDS Pecwa_3652 NC_013421.1 4017843 4018268 R PFAM: protein of unknown function DUF1240; KEGG: ypn:YPN_1051 hypothetical protein; hypothetical protein complement(4017843..4018268) Pectobacterium wasabiae WPP163 8532078 YP_003260995.1 CDS Pecwa_3653 NC_013421.1 4018240 4019097 R KEGG: eca:ECA3675 hypothetical protein; hypothetical protein complement(4018240..4019097) Pectobacterium wasabiae WPP163 8532079 YP_003260996.1 CDS Pecwa_3654 NC_013421.1 4019502 4020056 R TIGRFAM: CRISPR-associated protein, Csy4 family; PFAM: CRISPR-associated protein Csy4; KEGG: eca:ECA3684 hypothetical protein; CRISPR-associated protein, Csy4 family complement(4019502..4020056) Pectobacterium wasabiae WPP163 8532080 YP_003260997.1 CDS Pecwa_3655 NC_013421.1 4020066 4021079 R TIGRFAM: CRISPR-associated protein, Csy3 family; PFAM: CRISPR-associated protein Csy3; KEGG: eca:ECA3683 hypothetical protein; CRISPR-associated protein, Csy3 family complement(4020066..4021079) Pectobacterium wasabiae WPP163 8532081 YP_003260998.1 CDS Pecwa_3656 NC_013421.1 4021093 4022025 R TIGRFAM: CRISPR-associated protein, Csy2 family; PFAM: CRISPR-associated protein Csy2; KEGG: eca:ECA3682 hypothetical protein; CRISPR-associated protein, Csy2 family complement(4021093..4022025) Pectobacterium wasabiae WPP163 8532082 YP_003260999.1 CDS Pecwa_3657 NC_013421.1 4022022 4023356 R TIGRFAM: CRISPR-associated protein, Csy1 family; PFAM: CRISPR-associated protein Csy1; KEGG: eca:ECA3681 hypothetical protein; CRISPR-associated protein, Csy1 family complement(4022022..4023356) Pectobacterium wasabiae WPP163 8532083 YP_003261000.1 CDS Pecwa_3658 NC_013421.1 4023380 4026670 R TIGRFAM: CRISPR-associated helicase Cas3 family; KEGG: eca:ECA3680 hypothetical protein; CRISPR-associated helicase Cas3 family complement(4023380..4026670) Pectobacterium wasabiae WPP163 8532084 YP_003261001.1 CDS Pecwa_3659 NC_013421.1 4026667 4027647 R TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: eca:ECA3679 hypothetical protein; CRISPR-associated protein Cas1 complement(4026667..4027647) Pectobacterium wasabiae WPP163 8532085 YP_003261002.1 CDS Pecwa_3660 NC_013421.1 4029514 4029933 R PFAM: protein of unknown function UPF0047; KEGG: eca:ECA3688 hypothetical protein; hypothetical protein complement(4029514..4029933) Pectobacterium wasabiae WPP163 8532086 YP_003261003.1 CDS uvrA NC_013421.1 4029951 4032785 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrsubunit betas scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(4029951..4032785) Pectobacterium wasabiae WPP163 8532087 YP_003261004.1 CDS Pecwa_3662 NC_013421.1 4033035 4033577 D binds to single stranded DNA and PriA helcase facilitate replication restart; single-stranded DNA-binding protein 4033035..4033577 Pectobacterium wasabiae WPP163 8532088 YP_003261005.1 CDS Pecwa_3663 NC_013421.1 4033812 4035653 D PFAM: amidohydrolase; amidohydrolase; KEGG: pct:PC1_3513 amidohydrolase 3; amidohydrolase 4033812..4035653 Pectobacterium wasabiae WPP163 8532089 YP_003261006.1 CDS Pecwa_3664 NC_013421.1 4035885 4036340 D PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_3514 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4035885..4036340 Pectobacterium wasabiae WPP163 8532090 YP_003261007.1 CDS Pecwa_3665 NC_013421.1 4036408 4036998 D KEGG: pct:PC1_3515 hypothetical protein; hypothetical protein 4036408..4036998 Pectobacterium wasabiae WPP163 8532091 YP_003261008.1 CDS Pecwa_3666 NC_013421.1 4037110 4037541 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: pct:PC1_3517 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase complement(4037110..4037541) Pectobacterium wasabiae WPP163 8532092 YP_003261009.1 CDS Pecwa_3667 NC_013421.1 4037682 4038113 R PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_3518 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4037682..4038113) Pectobacterium wasabiae WPP163 8532093 YP_003261010.1 CDS Pecwa_3668 NC_013421.1 4038205 4039623 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: pct:PC1_3519 GntR family transcriptional regulator; GntR family transcriptional regulator 4038205..4039623 Pectobacterium wasabiae WPP163 8532094 YP_003261011.1 CDS Pecwa_3669 NC_013421.1 4039665 4040714 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: eca:ECA3745 LacI family transcriptional regulator; LacI family transcriptional regulator complement(4039665..4040714) Pectobacterium wasabiae WPP163 8532095 YP_003261012.1 CDS Pecwa_3670 NC_013421.1 4040714 4041763 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA3746 ABC transporter membrane spanning protein; binding-protein-dependent transporters inner membrane component complement(4040714..4041763) Pectobacterium wasabiae WPP163 8532096 YP_003261013.1 CDS Pecwa_3671 NC_013421.1 4041775 4042773 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_3522 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(4041775..4042773) Pectobacterium wasabiae WPP163 8532097 YP_003261014.1 CDS Pecwa_3672 NC_013421.1 4042797 4043888 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: eca:ECA3748 ABC transporter ATP-binding protein; ABC transporter complement(4042797..4043888) Pectobacterium wasabiae WPP163 8532098 YP_003261015.1 CDS Pecwa_3673 NC_013421.1 4043891 4044997 R PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3749 plant-inducible protein; glycosyl hydrolase family protein complement(4043891..4044997) Pectobacterium wasabiae WPP163 8532099 YP_003261016.1 CDS Pecwa_3674 NC_013421.1 4044999 4047461 R KEGG: eca:ECA3750 hypothetical protein; hypothetical protein complement(4044999..4047461) Pectobacterium wasabiae WPP163 8532100 YP_003261017.1 CDS Pecwa_3675 NC_013421.1 4047905 4049212 D PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA3751 extracellular solute-binding protein; extracellular solute-binding protein 4047905..4049212 Pectobacterium wasabiae WPP163 8532101 YP_003261018.1 CDS Pecwa_3676 NC_013421.1 4049209 4049760 D KEGG: eca:ECA3752 hypothetical protein; hypothetical protein 4049209..4049760 Pectobacterium wasabiae WPP163 8532102 YP_003261019.1 CDS Pecwa_3677 NC_013421.1 4049757 4050665 D PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: pct:PC1_3528 ATPase BadF/BadG/BcrA/BcrD type; BadF/BadG/BcrA/BcrD type ATPase 4049757..4050665 Pectobacterium wasabiae WPP163 8532103 YP_003261020.1 CDS Pecwa_3678 NC_013421.1 4050684 4052507 D PFAM: metallophosphoesterase; KEGG: eca:ECA3754 calcineurin-like phosphoesterase; metallophosphoesterase 4050684..4052507 Pectobacterium wasabiae WPP163 8532104 YP_003261021.1 CDS Pecwa_3679 NC_013421.1 4052902 4053645 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA3756 ABC transporter ATP-binding protein; ABC transporter 4052902..4053645 Pectobacterium wasabiae WPP163 8532105 YP_003261022.1 CDS Pecwa_3680 NC_013421.1 4053642 4054496 D PFAM: ABC transporter; KEGG: eca:ECA3757 ABC transporter membrane protein; ABC transporter 4053642..4054496 Pectobacterium wasabiae WPP163 8532106 YP_003261023.1 CDS Pecwa_3681 NC_013421.1 4054537 4055415 D PFAM: periplasmic solute binding protein; KEGG: pct:PC1_3532 periplasmic solute binding protein; periplasmic solute binding protein 4054537..4055415 Pectobacterium wasabiae WPP163 8532107 YP_003261024.1 CDS Pecwa_3682 NC_013421.1 4055532 4057031 R KEGG: ypb:YPTS_3652 kinase; kinase complement(4055532..4057031) Pectobacterium wasabiae WPP163 8532108 YP_003261025.1 CDS Pecwa_3683 NC_013421.1 4057062 4058828 R KEGG: ypi:YpsIP31758_0504 hypothetical protein; hypothetical protein complement(4057062..4058828) Pectobacterium wasabiae WPP163 8532109 YP_003261026.1 CDS Pecwa_3684 NC_013421.1 4058828 4059868 R PFAM: von Willebrand factor A; SMART: von Willebrand factor A; KEGG: ypi:YpsIP31758_0505 tellurium resistance protein; von Willebrand factor A complement(4058828..4059868) Pectobacterium wasabiae WPP163 8532110 YP_003261027.1 CDS Pecwa_3685 NC_013421.1 4059986 4060624 R PFAM: von Willebrand factor A; SMART: von Willebrand factor A; KEGG: ypy:YPK_0568 von Willebrand factor A; von Willebrand factor A complement(4059986..4060624) Pectobacterium wasabiae WPP163 8532111 YP_003261028.1 CDS Pecwa_3686 NC_013421.1 4060625 4061269 R PFAM: stress protein; KEGG: ypi:YpsIP31758_0507 tellurium resistance protein; stress protein complement(4060625..4061269) Pectobacterium wasabiae WPP163 8532112 YP_003261029.1 CDS Pecwa_3687 NC_013421.1 4061297 4061935 R PFAM: von Willebrand factor A; SMART: von Willebrand factor A; KEGG: ypb:YPTS_3647 von Willebrand factor A; von Willebrand factor A complement(4061297..4061935) Pectobacterium wasabiae WPP163 8532113 YP_003261030.1 CDS Pecwa_3688 NC_013421.1 4062094 4062561 R KEGG: ecs:ECs1343 TerW; TerW protein complement(4062094..4062561) Pectobacterium wasabiae WPP163 8532114 YP_003261031.1 CDS Pecwa_3689 NC_013421.1 4062854 4063807 R KEGG: ecs:ECs1345 hypothetical protein; hypothetical protein complement(4062854..4063807) Pectobacterium wasabiae WPP163 8532115 YP_003261032.1 CDS Pecwa_3690 NC_013421.1 4063807 4064889 R KEGG: kpe:KPK_A0206 hypothetical protein; hypothetical protein complement(4063807..4064889) Pectobacterium wasabiae WPP163 8532116 YP_003261033.1 CDS Pecwa_3691 NC_013421.1 4064882 4065664 R KEGG: kpe:KPK_A0205 hypothetical protein; hypothetical protein complement(4064882..4065664) Pectobacterium wasabiae WPP163 8532117 YP_003261034.1 CDS Pecwa_3692 NC_013421.1 4065657 4066799 R KEGG: ecs:ECs1349 hypothetical protein; hypothetical protein complement(4065657..4066799) Pectobacterium wasabiae WPP163 8532118 YP_003261035.1 CDS Pecwa_3693 NC_013421.1 4066806 4067870 R PFAM: protein of unknown function DUF201; KEGG: ecv:APECO1_O1R67 hypothetical protein; hypothetical protein complement(4066806..4067870) Pectobacterium wasabiae WPP163 8532119 YP_003261036.1 CDS Pecwa_3694 NC_013421.1 4068192 4068773 D PFAM: stress protein; KEGG: ecs:ECs1351 TerZ; stress protein 4068192..4068773 Pectobacterium wasabiae WPP163 8532120 YP_003261037.1 CDS Pecwa_3695 NC_013421.1 4068773 4069927 D PFAM: tellurium resistance; stress protein; KEGG: ece:Z1611 phage inhibition, colicin resistance and tellurite resistance protein; tellurium resistance 4068773..4069927 Pectobacterium wasabiae WPP163 8532121 YP_003261038.1 CDS Pecwa_3696 NC_013421.1 4069951 4070406 D PFAM: tellurite resistance TerB; KEGG: kpe:KPK_A0200 tellurite resistance protein TerB; tellurite resistance TerB 4069951..4070406 Pectobacterium wasabiae WPP163 8532122 YP_003261039.1 CDS Pecwa_3697 NC_013421.1 4070432 4071475 D PFAM: integral membrane protein TerC; KEGG: ecs:ECs1354 TerC; integral membrane protein TerC 4070432..4071475 Pectobacterium wasabiae WPP163 8532123 YP_003261040.1 CDS Pecwa_3698 NC_013421.1 4071528 4072106 D PFAM: stress protein; KEGG: kpe:KPK_A0198 tellurium resistance protein TerD; stress protein 4071528..4072106 Pectobacterium wasabiae WPP163 8532124 YP_003261041.1 CDS Pecwa_3699 NC_013421.1 4072181 4072756 D PFAM: stress protein; KEGG: pmr:PMI2383 tellurite resistance protein; stress protein 4072181..4072756 Pectobacterium wasabiae WPP163 8532125 YP_003261042.1 CDS Pecwa_3700 NC_013421.1 4072800 4073483 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: ent:Ent638_3903 HAD family hydrolase; HAD-superfamily hydrolase complement(4072800..4073483) Pectobacterium wasabiae WPP163 8532126 YP_003261043.1 CDS Pecwa_3701 NC_013421.1 4073499 4074308 R PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: eca:ECA3759 DeoR family transcriptional regulator; DeoR family transcriptional regulator complement(4073499..4074308) Pectobacterium wasabiae WPP163 8532127 YP_003261044.1 CDS Pecwa_3702 NC_013421.1 4074733 4075491 D PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: ent:Ent638_0458 regulatory protein, IclR; transcriptional regulator, IclR family 4074733..4075491 Pectobacterium wasabiae WPP163 8532128 YP_003261045.1 CDS Pecwa_3703 NC_013421.1 4075544 4076890 R TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: ebw:BWG_3993 KpLE2 phage-like element; transporter; gluconate transporter complement(4075544..4076890) Pectobacterium wasabiae WPP163 8532129 YP_003261046.1 CDS Pecwa_3704 NC_013421.1 4077214 4079181 R KEGG: ent:Ent638_0455 hypothetical protein; TIGRFAM: dehydratase, YjhG/YagF family; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; hypothetical protein complement(4077214..4079181) Pectobacterium wasabiae WPP163 8532130 YP_003261047.1 CDS Pecwa_3705 NC_013421.1 4079321 4080238 R PFAM: dihydrodipicolinate synthetase; KEGG: ecd:ECDH10B_0255 CP4-6 prophage; lyase/synthase; dihydrodipicolinate synthetase complement(4079321..4080238) Pectobacterium wasabiae WPP163 8532131 YP_003261048.1 CDS pdxA NC_013421.1 4080711 4081691 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(4080711..4081691) Pectobacterium wasabiae WPP163 8532132 YP_003261049.1 CDS Pecwa_3707 NC_013421.1 4081684 4083003 R PFAM: type III effector Hrp-dependent outers; KEGG: eca:ECA3761 hypothetical protein; Hrp-dependent type III effector protein complement(4081684..4083003) Pectobacterium wasabiae WPP163 8532133 YP_003261050.1 CDS Pecwa_3708 NC_013421.1 4083248 4084384 D PFAM: iron-containing alcohol dehydrogenase; KEGG: pct:PC1_3537 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4083248..4084384 Pectobacterium wasabiae WPP163 8532134 YP_003261051.1 CDS Pecwa_3709 NC_013421.1 4084579 4085463 D PFAM: dihydrodipicolinate synthetase; KEGG: pct:PC1_3538 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 4084579..4085463 Pectobacterium wasabiae WPP163 8532135 YP_003261052.1 CDS Pecwa_3710 NC_013421.1 4085502 4086917 D PFAM: Na+/solute symporter; KEGG: pct:PC1_3539 Na+/solute symporter; Na+/solute symporter 4085502..4086917 Pectobacterium wasabiae WPP163 8532136 YP_003261053.1 CDS Pecwa_3711 NC_013421.1 4086921 4088108 D KEGG: eca:ECA3765 hypothetical protein; hypothetical protein 4086921..4088108 Pectobacterium wasabiae WPP163 8532137 YP_003261054.1 CDS Pecwa_3712 NC_013421.1 4088174 4088641 D PFAM: conserved hypothetical protein; KEGG: pct:PC1_3541 hypothetical protein; hypothetical protein 4088174..4088641 Pectobacterium wasabiae WPP163 8532138 YP_003261055.1 CDS Pecwa_3713 NC_013421.1 4088687 4089376 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA3767 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4088687..4089376 Pectobacterium wasabiae WPP163 8532139 YP_003261056.1 CDS Pecwa_3714 NC_013421.1 4090034 4092538 D PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; KEGG: eca:ECA3768 formate acetyltransferase; formate C-acetyltransferase 4090034..4092538 Pectobacterium wasabiae WPP163 8532140 YP_003261057.1 CDS Pecwa_3715 NC_013421.1 4092626 4093576 D KEGG: eca:ECA3769 pyruvate formate-lyase activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; glycyl-radical enzyme activating protein family 4092626..4093576 Pectobacterium wasabiae WPP163 8532141 YP_003261058.1 CDS Pecwa_3716 NC_013421.1 4093629 4094045 D PFAM: small multidrug resistance protein; KEGG: eca:ECA3770 quaternary ammonium compound resistance protein; small multidrug resistance protein 4093629..4094045 Pectobacterium wasabiae WPP163 8532142 YP_003261059.1 CDS Pecwa_3717 NC_013421.1 4094063 4094389 D PFAM: small multidrug resistance protein; KEGG: eca:ECA3771 multidrug resistance protein; small multidrug resistance protein 4094063..4094389 Pectobacterium wasabiae WPP163 8532143 YP_003261060.1 CDS Pecwa_3718 NC_013421.1 4094429 4095385 R TIGRFAM: ribokinase; PFAM: PfkB domain protein; phosphomethylpyrimidine kinase type-1; KEGG: kpu:KP1_2751 ribokinase; ribokinase complement(4094429..4095385) Pectobacterium wasabiae WPP163 8532144 YP_003261061.1 CDS Pecwa_3719 NC_013421.1 4095382 4096275 R PFAM: ROK family protein; KEGG: elf:LF82_0079 D-allose kinase; D-allose kinase complement(4095382..4096275) Pectobacterium wasabiae WPP163 8532145 YP_003261062.1 CDS Pecwa_3720 NC_013421.1 4096272 4096964 R PFAM: ribulose-phosphate 3-epimerase; KEGG: kpu:KP1_2752 ribulose-phosphate 3-epimerase; allulose-6-phosphate 3-epimerase complement(4096272..4096964) Pectobacterium wasabiae WPP163 8532146 YP_003261063.1 CDS Pecwa_3721 NC_013421.1 4096964 4098010 R PFAM: inner-membrane translocator; KEGG: ypb:YPTS_0834 inner-membrane translocator; inner-membrane translocator complement(4096964..4098010) Pectobacterium wasabiae WPP163 8532147 YP_003261064.1 CDS Pecwa_3722 NC_013421.1 4098028 4099017 R PFAM: inner-membrane translocator; KEGG: ypb:YPTS_0835 inner-membrane translocator; inner-membrane translocator complement(4098028..4099017) Pectobacterium wasabiae WPP163 8532148 YP_003261065.1 CDS Pecwa_3723 NC_013421.1 4099010 4100533 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ypb:YPTS_0836 ABC transporter; ABC transporter complement(4099010..4100533) Pectobacterium wasabiae WPP163 8532149 YP_003261066.1 CDS Pecwa_3724 NC_013421.1 4100538 4101521 R KEGG: ypy:YPK_3398 carbohydrate ABC transporter periplasmic-binding protein; carbohydrate ABC transporter periplasmic-binding protein complement(4100538..4101521) Pectobacterium wasabiae WPP163 8532150 YP_003261067.1 CDS Pecwa_3725 NC_013421.1 4101546 4102376 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: ypy:YPK_3397 DeoR family transcriptional regulator; DeoR family transcriptional regulator complement(4101546..4102376) Pectobacterium wasabiae WPP163 8532151 YP_003261068.1 CDS Pecwa_3726 NC_013421.1 4102573 4102677 R hypothetical protein complement(4102573..4102677) Pectobacterium wasabiae WPP163 8532152 YP_003261069.1 CDS Pecwa_3727 NC_013421.1 4102856 4103215 R PFAM: conserved hypothetical protein; KEGG: pct:PC1_3552 hypothetical protein; hypothetical protein complement(4102856..4103215) Pectobacterium wasabiae WPP163 8532153 YP_003261070.1 CDS Pecwa_3728 NC_013421.1 4103326 4104414 D with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein 4103326..4104414 Pectobacterium wasabiae WPP163 8532154 YP_003261071.1 CDS Pecwa_3729 NC_013421.1 4104470 4105750 R protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; enterobactin exporter EntS complement(4104470..4105750) Pectobacterium wasabiae WPP163 8532155 YP_003261072.1 CDS Pecwa_3730 NC_013421.1 4105933 4106985 D PFAM: transporter permease; KEGG: dda:Dd703_1497 transporter permease; transporter permease 4105933..4106985 Pectobacterium wasabiae WPP163 8532156 YP_003261073.1 CDS Pecwa_3731 NC_013421.1 4106982 4108001 D PFAM: transporter permease; KEGG: dda:Dd703_1496 transporter permease; transporter permease 4106982..4108001 Pectobacterium wasabiae WPP163 8532157 YP_003261074.1 CDS Pecwa_3732 NC_013421.1 4108030 4108860 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dda:Dd703_1495 ABC transporter; ABC transporter 4108030..4108860 Pectobacterium wasabiae WPP163 8532158 YP_003261075.1 CDS Pecwa_3733 NC_013421.1 4108849 4117416 R TIGRFAM: amino acid adenylation protein; non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: dze:Dd1591_1322 amino acid adenylation protein; amino acid adenylation protein complement(4108849..4117416) Pectobacterium wasabiae WPP163 8532159 YP_003261076.1 CDS Pecwa_3734 NC_013421.1 4117494 4117700 R PFAM: MbtH domain protein; KEGG: dze:Dd1591_1321 MbtH domain protein; MbtH domain-containing protein complement(4117494..4117700) Pectobacterium wasabiae WPP163 8532160 YP_003261077.1 CDS Pecwa_3735 NC_013421.1 4117672 4119021 R PFAM: esterase; KEGG: dda:Dd703_1492 esterase; enterobactin/ferric enterobactin esterase complement(4117672..4119021) Pectobacterium wasabiae WPP163 8532161 YP_003261078.1 CDS Pecwa_3736 NC_013421.1 4119470 4121677 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dda:Dd703_1491 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 4119470..4121677 Pectobacterium wasabiae WPP163 8532162 YP_003261079.1 CDS Pecwa_3737 NC_013421.1 4121779 4122642 D PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: dda:Dd703_1488 isochorismatase; isochorismatase 4121779..4122642 Pectobacterium wasabiae WPP163 8532163 YP_003261080.1 CDS Pecwa_3738 NC_013421.1 4122773 4125370 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(4122773..4125370) Pectobacterium wasabiae WPP163 8532164 YP_003261081.1 CDS Pecwa_3739 NC_013421.1 4125813 4126319 D KEGG: eca:ECA3779 hypothetical protein; hypothetical protein 4125813..4126319 Pectobacterium wasabiae WPP163 8532165 YP_003261082.1 CDS Pecwa_3740 NC_013421.1 4126447 4127847 R PFAM: protein of unknown function UPF0027; KEGG: pct:PC1_3555 hypothetical protein; hypothetical protein complement(4126447..4127847) Pectobacterium wasabiae WPP163 8532166 YP_003261083.1 CDS Pecwa_3741 NC_013421.1 4128112 4128423 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: eca:ECA3780 transcription regulator ArsR; ArsR family transcriptional regulator 4128112..4128423 Pectobacterium wasabiae WPP163 8532167 YP_003261084.1 CDS Pecwa_3742 NC_013421.1 4128488 4128586 D hypothetical protein 4128488..4128586 Pectobacterium wasabiae WPP163 8532168 YP_003261085.1 CDS Pecwa_3743 NC_013421.1 4128787 4131087 R Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA complement(4128787..4131087) Pectobacterium wasabiae WPP163 8532169 YP_003261086.1 CDS Pecwa_3744 NC_013421.1 4131365 4132498 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: pct:PC1_3558 transcriptional regulator, AraC family; AraC family transcriptional regulator 4131365..4132498 Pectobacterium wasabiae WPP163 8532170 YP_003261087.1 CDS Pecwa_3745 NC_013421.1 4132606 4133934 D PFAM: MmgE/PrpD family protein; KEGG: eca:ECA3784 hypothetical protein; MmgE/PrpD family protein 4132606..4133934 Pectobacterium wasabiae WPP163 8532171 YP_003261088.1 CDS Pecwa_3746 NC_013421.1 4134043 4135749 R KEGG: pct:PC1_3560 hypothetical protein; hypothetical protein complement(4134043..4135749) Pectobacterium wasabiae WPP163 8532172 YP_003261089.1 CDS Pecwa_3747 NC_013421.1 4135863 4137041 R PFAM: dienelactone hydrolase; KEGG: pct:PC1_3562 dienelactone hydrolase; dienelactone hydrolase complement(4135863..4137041) Pectobacterium wasabiae WPP163 8532173 YP_003261090.1 CDS Pecwa_3748 NC_013421.1 4137208 4137831 R KEGG: eca:ECA3786 hypothetical protein; hypothetical protein complement(4137208..4137831) Pectobacterium wasabiae WPP163 8532174 YP_003261091.1 CDS Pecwa_3749 NC_013421.1 4138030 4139214 R PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_3563 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(4138030..4139214) Pectobacterium wasabiae WPP163 8532175 YP_003261092.1 CDS Pecwa_3750 NC_013421.1 4139211 4140404 R PFAM: beta-lactamase; KEGG: pct:PC1_3564 beta-lactamase; beta-lactamase complement(4139211..4140404) Pectobacterium wasabiae WPP163 8532176 YP_003261093.1 CDS Pecwa_3751 NC_013421.1 4140523 4141419 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_3565 LysR family transcriptional regulator; LysR family transcriptional regulator 4140523..4141419 Pectobacterium wasabiae WPP163 8532177 YP_003261094.1 CDS Pecwa_3752 NC_013421.1 4141475 4142899 R E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(4141475..4142899) Pectobacterium wasabiae WPP163 8532178 YP_003261095.1 CDS aceF NC_013421.1 4143114 4144997 R E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase complement(4143114..4144997) Pectobacterium wasabiae WPP163 8532179 YP_003261096.1 CDS aceE NC_013421.1 4145012 4147675 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(4145012..4147675) Pectobacterium wasabiae WPP163 8532180 YP_003261097.1 CDS pdhR NC_013421.1 4147819 4148583 R activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR complement(4147819..4148583) Pectobacterium wasabiae WPP163 8532181 YP_003261098.1 CDS Pecwa_3756 NC_013421.1 4149230 4150588 D PFAM: amino acid permease-associated region; KEGG: eca:ECA3791 aromatic amino acid transporter; amino acid permease 4149230..4150588 Pectobacterium wasabiae WPP163 8532182 YP_003261099.1 CDS Pecwa_3757 NC_013421.1 4150670 4151524 R involved in regulation of beta-lactamase; signaling protein; regulatory protein AmpE complement(4150670..4151524) Pectobacterium wasabiae WPP163 8532183 YP_003261100.1 CDS Pecwa_3758 NC_013421.1 4151521 4152096 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: eca:ECA3795 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase complement(4151521..4152096) Pectobacterium wasabiae WPP163 8532184 YP_003261101.1 CDS Pecwa_3759 NC_013421.1 4152543 4153355 D PFAM: nucleoside-specific channel-forming protein, Tsx-like; KEGG: pct:PC1_3573 nucleoside-specific channel-forming protein Tsx; nucleoside-specific channel-forming protein, Tsx-like protein 4152543..4153355 Pectobacterium wasabiae WPP163 8532185 YP_003261102.1 CDS Pecwa_3760 NC_013421.1 4153499 4154389 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; quinolinate phosphoribosyltransferase 4153499..4154389 Pectobacterium wasabiae WPP163 8532186 YP_003261103.1 CDS Pecwa_3761 NC_013421.1 4154456 4154575 R hypothetical protein complement(4154456..4154575) Pectobacterium wasabiae WPP163 8532187 YP_003261104.1 CDS Pecwa_3762 NC_013421.1 4154699 4155145 D KEGG: pct:PC1_3575 major pilin subunit; major pilin subunit 4154699..4155145 Pectobacterium wasabiae WPP163 8532188 YP_003261105.1 CDS Pecwa_3763 NC_013421.1 4155148 4156620 D PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: eca:ECA3799 hypothetical protein; hypothetical protein 4155148..4156620 Pectobacterium wasabiae WPP163 8532189 YP_003261106.1 CDS Pecwa_3764 NC_013421.1 4156617 4157822 D PFAM: type II secretion system F domain; KEGG: eca:ECA3800 type IV pilin biogenesis protein; type IV pilin biogenesis protein 4156617..4157822 Pectobacterium wasabiae WPP163 8532190 YP_003261107.1 CDS Pecwa_3765 NC_013421.1 4157908 4158948 R catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase complement(4157908..4158948) Pectobacterium wasabiae WPP163 8532191 YP_003261108.1 CDS Pecwa_3766 NC_013421.1 4158938 4159048 R hypothetical protein complement(4158938..4159048) Pectobacterium wasabiae WPP163 8532192 YP_003261109.1 CDS coaE NC_013421.1 4159241 4159867 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 4159241..4159867 Pectobacterium wasabiae WPP163 8532193 YP_003261110.1 CDS Pecwa_3768 NC_013421.1 4159860 4160612 D PFAM: protein of unknown function DUF1342; KEGG: pct:PC1_3580 hypothetical protein; hypothetical protein 4159860..4160612 Pectobacterium wasabiae WPP163 8532194 YP_003261111.1 CDS Pecwa_3769 NC_013421.1 4160669 4160863 D PFAM: protein of unknown function DUF329; KEGG: pct:PC1_3581 hypothetical protein; hypothetical protein 4160669..4160863 Pectobacterium wasabiae WPP163 8532195 YP_003261112.1 CDS Pecwa_3770 NC_013421.1 4160908 4161303 R TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: pct:PC1_3582 mutator MutT protein; nucleoside triphosphate pyrophosphohydrolase complement(4160908..4161303) Pectobacterium wasabiae WPP163 8532196 YP_003261113.1 CDS Pecwa_3771 NC_013421.1 4161393 4164143 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(4161393..4164143) Pectobacterium wasabiae WPP163 8532197 YP_003261114.1 CDS Pecwa_3772 NC_013421.1 4164207 4164731 R secM translational pause allows for the initiation of secA translation; SecA regulator SecM complement(4164207..4164731) Pectobacterium wasabiae WPP163 8532198 YP_003261115.1 CDS Pecwa_3773 NC_013421.1 4164749 4165276 D PFAM: protein of unknown function DUF721; KEGG: eca:ECA3808 hypothetical protein; hypothetical protein 4164749..4165276 Pectobacterium wasabiae WPP163 8532199 YP_003261116.1 CDS lpxC NC_013421.1 4165289 4166221 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(4165289..4166221) Pectobacterium wasabiae WPP163 8532200 YP_003261117.1 CDS Pecwa_3775 NC_013421.1 4166311 4167462 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(4166311..4167462) Pectobacterium wasabiae WPP163 8532201 YP_003261118.1 CDS ftsA NC_013421.1 4167531 4168787 R ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA complement(4167531..4168787) Pectobacterium wasabiae WPP163 8532202 YP_003261119.1 CDS Pecwa_3777 NC_013421.1 4168841 4169665 R involved in septum formation; cell division protein FtsQ complement(4168841..4169665) Pectobacterium wasabiae WPP163 8532203 YP_003261120.1 CDS ddl NC_013421.1 4169667 4170587 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(4169667..4170587) Pectobacterium wasabiae WPP163 8532204 YP_003261121.1 CDS murC NC_013421.1 4170596 4172056 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(4170596..4172056) Pectobacterium wasabiae WPP163 8532205 YP_003261122.1 CDS murG NC_013421.1 4172119 4173210 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(4172119..4173210) Pectobacterium wasabiae WPP163 8532206 YP_003261123.1 CDS Pecwa_3781 NC_013421.1 4173207 4174409 R integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW complement(4173207..4174409) Pectobacterium wasabiae WPP163 8532207 YP_003261124.1 CDS murD NC_013421.1 4174409 4175725 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(4174409..4175725) Pectobacterium wasabiae WPP163 8532208 YP_003261125.1 CDS mraY NC_013421.1 4175729 4176811 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(4175729..4176811) Pectobacterium wasabiae WPP163 8532209 YP_003261126.1 CDS murF NC_013421.1 4176805 4178166 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: eca:ECA3819 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(4176805..4178166) Pectobacterium wasabiae WPP163 8532210 YP_003261127.1 CDS murE NC_013421.1 4178163 4179650 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(4178163..4179650) Pectobacterium wasabiae WPP163 8532211 YP_003261128.1 CDS Pecwa_3786 NC_013421.1 4179637 4181400 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pct:PC1_3598 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase complement(4179637..4181400) Pectobacterium wasabiae WPP163 8532212 YP_003261129.1 CDS Pecwa_3787 NC_013421.1 4181427 4181744 R membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL complement(4181427..4181744) Pectobacterium wasabiae WPP163 8532213 YP_003261130.1 CDS mraW NC_013421.1 4181741 4182685 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: pct:PC1_3600 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(4181741..4182685) Pectobacterium wasabiae WPP163 8532214 YP_003261131.1 CDS Pecwa_3789 NC_013421.1 4182688 4183146 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(4182688..4183146) Pectobacterium wasabiae WPP163 8532215 YP_003261132.1 CDS Pecwa_3790 NC_013421.1 4183954 4184391 D PFAM: protein of unknown function DUF1144; KEGG: eca:ECA3826 hypothetical protein; hypothetical protein 4183954..4184391 Pectobacterium wasabiae WPP163 8532216 YP_003261133.1 CDS Pecwa_3791 NC_013421.1 4184459 4185463 R binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; FruR family transcriptional regulator complement(4184459..4185463) Pectobacterium wasabiae WPP163 8532217 YP_003261134.1 CDS ilvH NC_013421.1 4185734 4186225 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(4185734..4186225) Pectobacterium wasabiae WPP163 8532218 YP_003261135.1 CDS Pecwa_3793 NC_013421.1 4186228 4187946 R catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit complement(4186228..4187946) Pectobacterium wasabiae WPP163 8532219 YP_003261136.1 CDS Pecwa_3794 NC_013421.1 4188434 4190239 R PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA3830 AMP-binding protein; AMP-dependent synthetase and ligase complement(4188434..4190239) Pectobacterium wasabiae WPP163 8532220 YP_003261137.1 CDS Pecwa_3795 NC_013421.1 4190651 4192249 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 4190651..4192249 Pectobacterium wasabiae WPP163 8532221 YP_003261138.1 CDS Pecwa_3796 NC_013421.1 4192249 4193340 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 4192249..4193340 Pectobacterium wasabiae WPP163 8532222 YP_003261139.1 CDS Pecwa_3797 NC_013421.1 4193343 4194743 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 4193343..4194743 Pectobacterium wasabiae WPP163 8532223 YP_003261140.1 CDS leuD NC_013421.1 4194757 4195359 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 4194757..4195359 Pectobacterium wasabiae WPP163 8532224 YP_003261141.1 CDS Pecwa_3799 NC_013421.1 4195432 4195743 R PFAM: branched-chain amino acid transport; KEGG: eca:ECA3835 hypothetical protein; branched-chain amino acid transport complement(4195432..4195743) Pectobacterium wasabiae WPP163 8532225 YP_003261142.1 CDS Pecwa_3800 NC_013421.1 4195740 4196474 R PFAM: AzlC family protein; KEGG: pct:PC1_3612 AzlC family protein; AzlC family protein complement(4195740..4196474) Pectobacterium wasabiae WPP163 8532226 YP_003261143.1 CDS Pecwa_3801 NC_013421.1 4196580 4197416 R PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA3837 AraC family transcription regulator; AraC family transcriptional regulator complement(4196580..4197416) Pectobacterium wasabiae WPP163 8532227 YP_003261144.1 CDS Pecwa_3802 NC_013421.1 4197637 4199256 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA3838 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4197637..4199256) Pectobacterium wasabiae WPP163 8532228 YP_003261145.1 CDS Pecwa_3804 NC_013421.1 4200414 4200632 D hypothetical protein 4200414..4200632 Pectobacterium wasabiae WPP163 8532230 YP_003261146.1 CDS Pecwa_3805 NC_013421.1 4200819 4202477 D activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR 4200819..4202477 Pectobacterium wasabiae WPP163 8532231 YP_003261147.1 CDS Pecwa_3806 NC_013421.1 4202530 4203459 R PFAM: NmrA family protein; KEGG: eca:ECA3842 isoflavone oxidoreductase; NmrA family protein complement(4202530..4203459) Pectobacterium wasabiae WPP163 8532232 YP_003261148.1 CDS Pecwa_3807 NC_013421.1 4203745 4204650 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3843 LysR family transcriptional regulator; LysR family transcriptional regulator 4203745..4204650 Pectobacterium wasabiae WPP163 8532233 YP_003261149.1 CDS tbpA NC_013421.1 4204948 4205964 D part of the thiamine and TPP transporter tbpA-thiPQ; thiamine transporter substrate binding subunit 4204948..4205964 Pectobacterium wasabiae WPP163 8532234 YP_003261150.1 CDS thiP NC_013421.1 4205940 4207547 D permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 4205940..4207547 Pectobacterium wasabiae WPP163 8532235 YP_003261151.1 CDS thiQ NC_013421.1 4207534 4208238 D with TbpA and ThiP is part of the thiamine and TPP transporter; thiamine transporter ATP-binding subunit 4207534..4208238 Pectobacterium wasabiae WPP163 8532236 YP_003261152.1 CDS Pecwa_3811 NC_013421.1 4208249 4209856 R PFAM: glycoside hydrolase family 43; KEGG: pct:PC1_3622 xylan 1,4-beta-xylosidase; glycoside hydrolase family protein complement(4208249..4209856) Pectobacterium wasabiae WPP163 8532237 YP_003261153.1 CDS Pecwa_3812 NC_013421.1 4210138 4210245 D PFAM: IlvB leader peptide; KEGG: pct:PC1_3623 hypothetical protein; IlvB leader peptide 4210138..4210245 Pectobacterium wasabiae WPP163 8532238 YP_003261154.1 CDS Pecwa_3813 NC_013421.1 4210356 4212020 D TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: pct:PC1_3624 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase catalytic subunit 4210356..4212020 Pectobacterium wasabiae WPP163 8532239 YP_003261155.1 CDS Pecwa_3814 NC_013421.1 4212026 4212319 D with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; acetolactate synthase 1 regulatory subunit 4212026..4212319 Pectobacterium wasabiae WPP163 8532240 YP_003261156.1 CDS Pecwa_3815 NC_013421.1 4212360 4213130 R PFAM: SNARE associated Golgi protein; KEGG: pct:PC1_3626 SNARE associated Golgi protein; hypothetical protein complement(4212360..4213130) Pectobacterium wasabiae WPP163 8532241 YP_003261157.1 CDS Pecwa_3816 NC_013421.1 4213278 4214858 D KEGG: pct:PC1_3627 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 4213278..4214858 Pectobacterium wasabiae WPP163 8532242 YP_003261158.1 CDS Pecwa_3817 NC_013421.1 4215012 4215314 D hypothetical protein 4215012..4215314 Pectobacterium wasabiae WPP163 8532243 YP_003261159.1 CDS Pecwa_3818 NC_013421.1 4215384 4215878 D hypothetical protein 4215384..4215878 Pectobacterium wasabiae WPP163 8532244 YP_003261160.1 CDS Pecwa_3819 NC_013421.1 4216600 4218966 D Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 4216600..4218966 Pectobacterium wasabiae WPP163 8532245 YP_003261161.1 CDS Pecwa_3820 NC_013421.1 4219128 4222031 D transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 4219128..4222031 Pectobacterium wasabiae WPP163 8532246 YP_003261162.1 CDS Pecwa_3821 NC_013421.1 4222540 4222776 D hypothetical protein 4222540..4222776 Pectobacterium wasabiae WPP163 8532247 YP_003261163.1 CDS Pecwa_3822 NC_013421.1 4222776 4223705 D KEGG: stm:STM1552 cytoplasmic protein; hypothetical protein 4222776..4223705 Pectobacterium wasabiae WPP163 8532248 YP_003261164.1 CDS Pecwa_3823 NC_013421.1 4223923 4224120 D hypothetical protein 4223923..4224120 Pectobacterium wasabiae WPP163 8532249 YP_003261165.1 CDS Pecwa_3824 NC_013421.1 4224166 4225089 D KEGG: stm:STM1552 cytoplasmic protein; hypothetical protein 4224166..4225089 Pectobacterium wasabiae WPP163 8532250 YP_003261166.1 CDS Pecwa_3825 NC_013421.1 4225122 4225850 D hypothetical protein 4225122..4225850 Pectobacterium wasabiae WPP163 8532251 YP_003261167.1 CDS Pecwa_3826 NC_013421.1 4225870 4226169 D PFAM: PAAR repeat-containing protein; KEGG: atc:AGR_L_1028 hypothetical protein; PAAR repeat-containing protein 4225870..4226169 Pectobacterium wasabiae WPP163 8532252 YP_003261168.1 CDS Pecwa_3827 NC_013421.1 4226414 4227067 D PFAM: pseudouridine synthase; KEGG: eca:ECA3854 ribosomal large subunit pseudouridine synthase A; pseudouridine synthase 4226414..4227067 Pectobacterium wasabiae WPP163 8532253 YP_003261169.1 CDS djlA NC_013421.1 4227163 4228053 R functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein complement(4227163..4228053) Pectobacterium wasabiae WPP163 8532254 YP_003261170.1 CDS Pecwa_3829 NC_013421.1 4228205 4230610 D determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein 4228205..4230610 Pectobacterium wasabiae WPP163 8532255 YP_003261171.1 CDS Pecwa_3830 NC_013421.1 4230700 4231995 D Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; peptidyl-prolyl cis-trans isomerase SurA 4230700..4231995 Pectobacterium wasabiae WPP163 8532256 YP_003261172.1 CDS pdxA NC_013421.1 4231995 4232996 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 4231995..4232996 Pectobacterium wasabiae WPP163 8532257 YP_003261173.1 CDS ksgA NC_013421.1 4232989 4233807 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 4232989..4233807 Pectobacterium wasabiae WPP163 8532258 YP_003261174.1 CDS apaG NC_013421.1 4233820 4234197 D protein associated with Co2+ and Mg2+ efflux; ApaG protein 4233820..4234197 Pectobacterium wasabiae WPP163 8532259 YP_003261175.1 CDS apaH NC_013421.1 4234200 4235045 D hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 4234200..4235045 Pectobacterium wasabiae WPP163 8532260 YP_003261176.1 CDS Pecwa_3835 NC_013421.1 4235098 4235292 R KEGG: pct:PC1_3638 hypothetical protein; hypothetical protein complement(4235098..4235292) Pectobacterium wasabiae WPP163 8532261 YP_003261177.1 CDS folA NC_013421.1 4235544 4236026 R catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase complement(4235544..4236026) Pectobacterium wasabiae WPP163 8532262 YP_003261178.1 CDS Pecwa_3837 NC_013421.1 4236125 4236595 R KEGG: eca:ECA3865 hypothetical protein; hypothetical protein complement(4236125..4236595) Pectobacterium wasabiae WPP163 8532263 YP_003261179.1 CDS Pecwa_3838 NC_013421.1 4236586 4237425 R PFAM: protein of unknown function DUF1212; KEGG: pct:PC1_3643 hypothetical protein; hypothetical protein complement(4236586..4237425) Pectobacterium wasabiae WPP163 8532264 YP_003261180.1 CDS Pecwa_3839 NC_013421.1 4237582 4238196 D PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA3867 LysE-type translocator; lysine exporter protein LysE/YggA 4237582..4238196 Pectobacterium wasabiae WPP163 8532265 YP_003261181.1 CDS carB NC_013421.1 4238283 4241507 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(4238283..4241507) Pectobacterium wasabiae WPP163 8532266 YP_003261182.1 CDS Pecwa_3841 NC_013421.1 4241522 4242670 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(4241522..4242670) Pectobacterium wasabiae WPP163 8532267 YP_003261183.1 CDS Pecwa_3842 NC_013421.1 4243116 4243937 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(4243116..4243937) Pectobacterium wasabiae WPP163 8532268 YP_003261184.1 CDS ispH NC_013421.1 4244273 4245223 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(4244273..4245223) Pectobacterium wasabiae WPP163 8532269 YP_003261185.1 CDS Pecwa_3844 NC_013421.1 4245204 4245677 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pct:PC1_3651 peptidylprolyl isomerase FKBP-type; FKBP-type peptidylprolyl isomerase complement(4245204..4245677) Pectobacterium wasabiae WPP163 8532270 YP_003261186.1 CDS lspA NC_013421.1 4245677 4246189 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(4245677..4246189) Pectobacterium wasabiae WPP163 8532271 YP_003261187.1 CDS ileS NC_013421.1 4246189 4249002 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(4246189..4249002) Pectobacterium wasabiae WPP163 8532272 YP_003261188.1 CDS Pecwa_3847 NC_013421.1 4249033 4249974 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(4249033..4249974) Pectobacterium wasabiae WPP163 8532273 YP_003261189.1 CDS rpsT NC_013421.1 4250400 4250663 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 4250400..4250663 Pectobacterium wasabiae WPP163 8532275 YP_003261190.1 CDS nhaR NC_013421.1 4250731 4251636 R Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR complement(4250731..4251636) Pectobacterium wasabiae WPP163 8532276 YP_003261191.1 CDS nhaA NC_013421.1 4251668 4252864 R exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter complement(4251668..4252864) Pectobacterium wasabiae WPP163 8532277 YP_003261192.1 CDS Pecwa_3852 NC_013421.1 4253143 4254279 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(4253143..4254279) Pectobacterium wasabiae WPP163 8532278 YP_003261193.1 CDS dnaK NC_013421.1 4254388 4256295 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(4254388..4256295) Pectobacterium wasabiae WPP163 8532279 YP_003261194.1 CDS Pecwa_3854 NC_013421.1 4256556 4256690 D hypothetical protein 4256556..4256690 Pectobacterium wasabiae WPP163 8532280 YP_003261195.1 CDS Pecwa_3855 NC_013421.1 4256786 4257361 D PFAM: GPR1/FUN34/yaaH family protein; KEGG: eca:ECA3883 hypothetical protein; hypothetical protein 4256786..4257361 Pectobacterium wasabiae WPP163 8532281 YP_003261196.1 CDS Pecwa_3856 NC_013421.1 4257493 4258830 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA3884 transporter; major facilitator superfamily protein complement(4257493..4258830) Pectobacterium wasabiae WPP163 8532282 YP_003261197.1 CDS mogA NC_013421.1 4258954 4259541 R forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA complement(4258954..4259541) Pectobacterium wasabiae WPP163 8532283 YP_003261198.1 CDS Pecwa_3858 NC_013421.1 4259931 4261019 D KEGG: pct:PC1_3663 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 4259931..4261019 Pectobacterium wasabiae WPP163 8532284 YP_003261199.1 CDS Pecwa_3859 NC_013421.1 4261098 4262051 R KEGG: pct:PC1_3664 transaldolase; TIGRFAM: transaldolase; PFAM: transaldolase; transaldolase B complement(4261098..4262051) Pectobacterium wasabiae WPP163 8532285 YP_003261200.1 CDS Pecwa_3860 NC_013421.1 4262354 4263127 D PFAM: protein of unknown function DUF328; KEGG: pct:PC1_3665 hypothetical protein; hypothetical protein 4262354..4263127 Pectobacterium wasabiae WPP163 8532286 YP_003261201.1 CDS Pecwa_3861 NC_013421.1 4263311 4264600 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(4263311..4264600) Pectobacterium wasabiae WPP163 8532287 YP_003261202.1 CDS Pecwa_3862 NC_013421.1 4264604 4265533 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(4264604..4265533) Pectobacterium wasabiae WPP163 8532288 YP_003261203.1 CDS thrA NC_013421.1 4265536 4267995 R multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I complement(4265536..4267995) Pectobacterium wasabiae WPP163 8532289 YP_003261204.1 CDS Pecwa_3864 NC_013421.1 4268424 4269110 R member of the SPOUT superfamily of methyltransferases; RNA methyltransferase complement(4268424..4269110) Pectobacterium wasabiae WPP163 8532290 YP_003261205.1 CDS Pecwa_3865 NC_013421.1 4269867 4270583 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pct:PC1_3671 transcriptional regulator; two-component response regulator 4269867..4270583 Pectobacterium wasabiae WPP163 8532291 YP_003261206.1 CDS Pecwa_3866 NC_013421.1 4270641 4271123 R PFAM: CreA family protein; KEGG: eca:ECA3894 hypothetical protein; hypothetical protein complement(4270641..4271123) Pectobacterium wasabiae WPP163 8532292 YP_003261207.1 CDS Pecwa_3867 NC_013421.1 4271329 4272216 D PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA3896 right origin-binding protein; AraC family transcriptional regulator 4271329..4272216 Pectobacterium wasabiae WPP163 8532293 YP_003261208.1 CDS Pecwa_3868 NC_013421.1 4272205 4272855 R catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase complement(4272205..4272855) Pectobacterium wasabiae WPP163 8532294 YP_003261209.1 CDS Pecwa_3869 NC_013421.1 4272906 4273445 D pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 4272906..4273445 Pectobacterium wasabiae WPP163 8532295 YP_003261210.1 CDS Pecwa_3870 NC_013421.1 4273449 4273796 R When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor complement(4273449..4273796) Pectobacterium wasabiae WPP163 8532296 YP_003261211.1 CDS Pecwa_3871 NC_013421.1 4273869 4275803 R catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase complement(4273869..4275803) Pectobacterium wasabiae WPP163 8532297 YP_003261212.1 CDS Pecwa_3872 NC_013421.1 4276273 4277940 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 4276273..4277940 Pectobacterium wasabiae WPP163 8532298 YP_003261213.1 CDS Pecwa_3873 NC_013421.1 4278022 4279749 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pct:PC1_3679 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4278022..4279749) Pectobacterium wasabiae WPP163 8532299 YP_003261214.1 CDS Pecwa_3875 NC_013421.1 4280219 4281220 D TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: eca:ECA3904 zinc-binding dehydrogenase; zinc-binding alcohol dehydrogenase family protein 4280219..4281220 Pectobacterium wasabiae WPP163 8532301 YP_003261215.1 CDS Pecwa_3876 NC_013421.1 4281274 4282506 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(4281274..4282506) Pectobacterium wasabiae WPP163 8532302 YP_003261216.1 CDS Pecwa_3877 NC_013421.1 4282810 4283526 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(4282810..4283526) Pectobacterium wasabiae WPP163 8532303 YP_003261217.1 CDS Pecwa_3878 NC_013421.1 4283709 4284602 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 4283709..4284602 Pectobacterium wasabiae WPP163 8532304 YP_003261218.1 CDS Pecwa_3880 NC_013421.1 4284901 4285392 R KEGG: ypi:YpsIP31758_2196 hypothetical protein; hypothetical protein complement(4284901..4285392) Pectobacterium wasabiae WPP163 8532306 YP_003261219.1 CDS Pecwa_3881 NC_013421.1 4285816 4286115 D hypothetical protein 4285816..4286115 Pectobacterium wasabiae WPP163 8532307 YP_003261220.1 CDS Pecwa_3882 NC_013421.1 4286142 4286882 R PFAM: protein of unknown function DUF541; KEGG: pct:PC1_3685 hypothetical protein; hypothetical protein complement(4286142..4286882) Pectobacterium wasabiae WPP163 8532308 YP_003261221.1 CDS Pecwa_3883 NC_013421.1 4287073 4287687 R Involved in the export of arginine; arginine exporter protein complement(4287073..4287687) Pectobacterium wasabiae WPP163 8532309 YP_003261222.1 CDS Pecwa_3884 NC_013421.1 4287809 4288627 R PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: pct:PC1_3687 transcriptional regulator, IclR family; transcriptional regulator, IclR family complement(4287809..4288627) Pectobacterium wasabiae WPP163 8532310 YP_003261223.1 CDS Pecwa_3885 NC_013421.1 4289095 4290624 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_3688 ABC transporter; ABC transporter 4289095..4290624 Pectobacterium wasabiae WPP163 8532311 YP_003261224.1 CDS Pecwa_3886 NC_013421.1 4290711 4291841 D PFAM: inner-membrane translocator; KEGG: pct:PC1_3689 inner-membrane translocator; inner-membrane translocator 4290711..4291841 Pectobacterium wasabiae WPP163 8532312 YP_003261225.1 CDS Pecwa_3887 NC_013421.1 4291856 4292956 D KEGG: pct:PC1_3690 hypothetical protein; hypothetical protein 4291856..4292956 Pectobacterium wasabiae WPP163 8532313 YP_003261226.1 CDS Pecwa_3888 NC_013421.1 4292971 4293816 D PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: pct:PC1_3691 gluconolactonase; gluconolactonase 4292971..4293816 Pectobacterium wasabiae WPP163 8532314 YP_003261227.1 CDS Pecwa_3889 NC_013421.1 4294074 4295072 D NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate; 2,3-diketo-L-gulonate reductase 4294074..4295072 Pectobacterium wasabiae WPP163 8532315 YP_003261228.1 CDS Pecwa_3890 NC_013421.1 4295087 4295560 D PFAM: conserved hypothetical protein; KEGG: pct:PC1_3693 hypothetical protein; hypothetical protein 4295087..4295560 Pectobacterium wasabiae WPP163 8532316 YP_003261229.1 CDS Pecwa_3891 NC_013421.1 4295682 4296983 D PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_3694 major facilitator superfamily MFS_1; major facilitator superfamily protein 4295682..4296983 Pectobacterium wasabiae WPP163 8532317 YP_003261230.1 CDS Pecwa_3892 NC_013421.1 4296980 4298497 D PFAM: carbohydrate kinase, FGGY-like; KEGG: pct:PC1_3695 carbohydrate kinase FGGY; FGGY-like carbohydrate kinase 4296980..4298497 Pectobacterium wasabiae WPP163 8532318 YP_003261231.1 CDS sgbH NC_013421.1 4298494 4299150 D catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate; 3-keto-L-gulonate-6-phosphate decarboxylase 4298494..4299150 Pectobacterium wasabiae WPP163 8532319 YP_003261232.1 CDS Pecwa_3894 NC_013421.1 4299152 4300012 D L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; L-xylulose 5-phosphate 3-epimerase 4299152..4300012 Pectobacterium wasabiae WPP163 8532320 YP_003261233.1 CDS sgbE NC_013421.1 4300006 4300707 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 4300006..4300707 Pectobacterium wasabiae WPP163 8532321 YP_003261234.1 CDS Pecwa_3896 NC_013421.1 4300754 4301605 R PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: pct:PC1_3699 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS complement(4300754..4301605) Pectobacterium wasabiae WPP163 8532322 YP_003261235.1 CDS Pecwa_3897 NC_013421.1 4301732 4302808 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase complement(4301732..4302808) Pectobacterium wasabiae WPP163 8532323 YP_003261236.1 CDS pgk NC_013421.1 4302947 4304110 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(4302947..4304110) Pectobacterium wasabiae WPP163 8532324 YP_003261237.1 CDS Pecwa_3899 NC_013421.1 4304183 4305199 R NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase complement(4304183..4305199) Pectobacterium wasabiae WPP163 8532325 YP_003261238.1 CDS Pecwa_3900 NC_013421.1 4305516 4307510 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(4305516..4307510) Pectobacterium wasabiae WPP163 8532326 YP_003261239.1 CDS Pecwa_3901 NC_013421.1 4307920 4308672 D PFAM: peptidase M48 Ste24p; KEGG: pct:PC1_3704 peptidase M48 Ste24p; peptidase M48 Ste24p 4307920..4308672 Pectobacterium wasabiae WPP163 8532327 YP_003261240.1 CDS Pecwa_3902 NC_013421.1 4309348 4309893 D PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pct:PC1_3705 LuxR family transcriptional regulator; LuxR family transcriptional regulator 4309348..4309893 Pectobacterium wasabiae WPP163 8532328 YP_003261241.1 CDS Pecwa_3903 NC_013421.1 4309952 4311931 R catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase complement(4309952..4311931) Pectobacterium wasabiae WPP163 8532329 YP_003261242.1 CDS Pecwa_3904 NC_013421.1 4311924 4312082 R hypothetical protein complement(4311924..4312082) Pectobacterium wasabiae WPP163 8532330 YP_003261243.1 CDS Pecwa_3905 NC_013421.1 4312572 4313792 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 4312572..4313792 Pectobacterium wasabiae WPP163 8532331 YP_003261244.1 CDS Pecwa_3906 NC_013421.1 4314103 4314615 D PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: eca:ECA3921 hypothetical protein; hypothetical protein 4314103..4314615 Pectobacterium wasabiae WPP163 8532332 YP_003261245.1 CDS Pecwa_3907 NC_013421.1 4314712 4315410 D PFAM: endonuclease I; KEGG: eca:ECA3922 endonuclease; deoxyribonuclease I 4314712..4315410 Pectobacterium wasabiae WPP163 8532333 YP_003261246.1 CDS Pecwa_3908 NC_013421.1 4315526 4316260 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 4315526..4316260 Pectobacterium wasabiae WPP163 8532334 YP_003261247.1 CDS Pecwa_3909 NC_013421.1 4316272 4317231 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 4316272..4317231 Pectobacterium wasabiae WPP163 8532335 YP_003261248.1 CDS Pecwa_3910 NC_013421.1 4317306 4317869 D PFAM: protein of unknown function DUF179; KEGG: pct:PC1_3712 hypothetical protein; hypothetical protein 4317306..4317869 Pectobacterium wasabiae WPP163 8532336 YP_003261249.1 CDS Pecwa_3911 NC_013421.1 4317869 4318288 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 4317869..4318288 Pectobacterium wasabiae WPP163 8532337 YP_003261250.1 CDS Pecwa_3912 NC_013421.1 4318410 4319414 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(4318410..4319414) Pectobacterium wasabiae WPP163 8532338 YP_003261251.1 CDS Pecwa_3913 NC_013421.1 4319584 4320969 D TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: eca:ECA3928 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4319584..4320969 Pectobacterium wasabiae WPP163 8532339 YP_003261252.1 CDS Pecwa_3914 NC_013421.1 4321076 4322374 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(4321076..4322374) Pectobacterium wasabiae WPP163 8532340 YP_003261253.1 CDS Pecwa_3915 NC_013421.1 4322474 4322674 R PFAM: protein of unknown function DUF2065; KEGG: eca:ECA3930 hypothetical protein; hypothetical protein complement(4322474..4322674) Pectobacterium wasabiae WPP163 8532341 YP_003261254.1 CDS Pecwa_3916 NC_013421.1 4322799 4323794 R with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC complement(4322799..4323794) Pectobacterium wasabiae WPP163 8532342 YP_003261255.1 CDS Pecwa_3917 NC_013421.1 4323798 4325045 R with HflC inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflK complement(4323798..4325045) Pectobacterium wasabiae WPP163 8532343 YP_003261256.1 CDS Pecwa_3918 NC_013421.1 4325142 4326422 R involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; GTPase HflX complement(4325142..4326422) Pectobacterium wasabiae WPP163 8532344 YP_003261257.1 CDS hfq NC_013421.1 4326517 4326816 R Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(4326517..4326816) Pectobacterium wasabiae WPP163 8532345 YP_003261258.1 CDS miaA NC_013421.1 4326930 4327871 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(4326930..4327871) Pectobacterium wasabiae WPP163 8532346 YP_003261259.1 CDS mutL NC_013421.1 4327864 4329849 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(4327864..4329849) Pectobacterium wasabiae WPP163 8532347 YP_003261260.1 CDS Pecwa_3922 NC_013421.1 4329901 4331529 R PFAM: cell wall hydrolase/autolysin; peptidoglycan-binding lysin domain; SMART: cell wall hydrolase/autolysin; peptidoglycan-binding LysM; KEGG: pct:PC1_3724 cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(4329901..4331529) Pectobacterium wasabiae WPP163 8532348 YP_003261261.1 CDS Pecwa_3923 NC_013421.1 4331526 4332008 R possibly involved in cell wall synthesis; ATPase complement(4331526..4332008) Pectobacterium wasabiae WPP163 8532349 YP_003261262.1 CDS Pecwa_3924 NC_013421.1 4332048 4333580 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: eca:ECA3939 hypothetical protein; hypothetical protein complement(4332048..4333580) Pectobacterium wasabiae WPP163 8532350 YP_003261263.1 CDS Pecwa_3925 NC_013421.1 4333726 4334865 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pct:PC1_3728 iron-sulfur cluster binding protein; iron-sulfur cluster binding protein 4333726..4334865 Pectobacterium wasabiae WPP163 8532351 YP_003261264.1 CDS Pecwa_3926 NC_013421.1 4335363 4336925 R TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pct:PC1_3729 alkyl hydroperoxide reductase, F subunit; alkyl hydroperoxide reductase complement(4335363..4336925) Pectobacterium wasabiae WPP163 8532352 YP_003261265.1 CDS Pecwa_3927 NC_013421.1 4337055 4337618 R with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; alkyl hydroperoxide reductase subunit C complement(4337055..4337618) Pectobacterium wasabiae WPP163 8532353 YP_003261266.1 CDS Pecwa_3928 NC_013421.1 4337729 4339378 R KEGG: eca:ECA3943 hypothetical protein; hypothetical protein complement(4337729..4339378) Pectobacterium wasabiae WPP163 8532354 YP_003261267.1 CDS Pecwa_3929 NC_013421.1 4339594 4342629 D KEGG: psp:PSPPH_0319 autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; outer membrane autotransporter barrel domain-containing protein 4339594..4342629 Pectobacterium wasabiae WPP163 8532355 YP_003261268.1 CDS Pecwa_3930 NC_013421.1 4343019 4343810 D KEGG: pct:PC1_1351 hypothetical protein; hypothetical protein 4343019..4343810 Pectobacterium wasabiae WPP163 8532356 YP_003261269.1 CDS Pecwa_3931 NC_013421.1 4344265 4344807 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(4344265..4344807) Pectobacterium wasabiae WPP163 8532359 YP_003261270.1 CDS Pecwa_3932 NC_013421.1 4345115 4346164 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 4345115..4346164 Pectobacterium wasabiae WPP163 8532360 YP_003261271.1 CDS psd NC_013421.1 4346309 4347265 D catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 4346309..4347265 Pectobacterium wasabiae WPP163 8532361 YP_003261272.1 CDS Pecwa_3934 NC_013421.1 4347306 4350629 D PFAM: MscS Mechanosensitive ion channel; KEGG: eca:ECA3967 hypothetical protein; hypothetical protein 4347306..4350629 Pectobacterium wasabiae WPP163 8532362 YP_003261273.1 CDS Pecwa_3935 NC_013421.1 4350713 4351690 R lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase complement(4350713..4351690) Pectobacterium wasabiae WPP163 8532363 YP_003261274.1 CDS Pecwa_3936 NC_013421.1 4352165 4353961 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 4352165..4353961 Pectobacterium wasabiae WPP163 8532364 YP_003261275.1 CDS Pecwa_3937 NC_013421.1 4353954 4354691 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 4353954..4354691 Pectobacterium wasabiae WPP163 8532365 YP_003261276.1 CDS Pecwa_3938 NC_013421.1 4354701 4355099 D part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C 4354701..4355099 Pectobacterium wasabiae WPP163 8532366 YP_003261277.1 CDS Pecwa_3939 NC_013421.1 4355114 4355470 D in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 4355114..4355470 Pectobacterium wasabiae WPP163 8532367 YP_003261278.1 CDS Pecwa_3940 NC_013421.1 4355580 4356164 D lipocalin; globomycin-sensitive outer membrane lipoprotein; outer membrane lipoprotein Blc 4355580..4356164 Pectobacterium wasabiae WPP163 8532368 YP_003261279.1 CDS Pecwa_3941 NC_013421.1 4356206 4356559 R PFAM: protein of unknown function DUF486; KEGG: eca:ECA3974 hypothetical protein; hypothetical protein complement(4356206..4356559) Pectobacterium wasabiae WPP163 8532369 YP_003261280.1 CDS Pecwa_3942 NC_013421.1 4356662 4356793 R PFAM: entericidin EcnAB; KEGG: eca:ECA3975 entericidin B; entericidin EcnAB complement(4356662..4356793) Pectobacterium wasabiae WPP163 8532370 YP_003261281.1 CDS Pecwa_3943 NC_013421.1 4356977 4357543 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(4356977..4357543) Pectobacterium wasabiae WPP163 8532371 YP_003261282.1 CDS Pecwa_3944 NC_013421.1 4357585 4358631 D KEGG: pct:PC1_3766 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 4357585..4358631 Pectobacterium wasabiae WPP163 8532372 YP_003261283.1 CDS Pecwa_3945 NC_013421.1 4358692 4359036 R KEGG: eca:ECA3978 lipoprotein; lipoprotein complement(4358692..4359036) Pectobacterium wasabiae WPP163 8532373 YP_003261284.1 CDS pgi NC_013421.1 4359080 4360729 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(4359080..4360729) Pectobacterium wasabiae WPP163 8532374 YP_003261285.1 CDS Pecwa_3947 NC_013421.1 4361236 4362612 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 4361236..4362612 Pectobacterium wasabiae WPP163 8532375 YP_003261286.1 CDS Pecwa_3948 NC_013421.1 4363019 4364665 R TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: eca:ECA3983 sodium/phosphate cotransporter; sodium-dependent inorganic phosphate (Pi) transporter complement(4363019..4364665) Pectobacterium wasabiae WPP163 8532376 YP_003261287.1 CDS Pecwa_3949 NC_013421.1 4365044 4366498 D TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter; citrate transporter; KEGG: pct:PC1_3771 anion transporter; anion transporter 4365044..4366498 Pectobacterium wasabiae WPP163 8532377 YP_003261288.1 CDS Pecwa_3950 NC_013421.1 4366953 4367387 D KEGG: lhk:LHK_01568 hypothetical protein; hypothetical protein 4366953..4367387 Pectobacterium wasabiae WPP163 8532378 YP_003261289.1 CDS metH NC_013421.1 4367744 4371427 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(4367744..4371427) Pectobacterium wasabiae WPP163 8532379 YP_003261290.1 CDS Pecwa_3952 NC_013421.1 4371619 4372452 D regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; IclR family transcriptional regulator 4371619..4372452 Pectobacterium wasabiae WPP163 8532380 YP_003261291.1 CDS Pecwa_3953 NC_013421.1 4372516 4373256 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pmr:PMI2193 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 4372516..4373256 Pectobacterium wasabiae WPP163 8532381 YP_003261292.1 CDS Pecwa_3954 NC_013421.1 4373261 4373920 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: pay:PAU_04266 acyltransferase; phospholipid/glycerol acyltransferase 4373261..4373920 Pectobacterium wasabiae WPP163 8532382 YP_003261293.1 CDS Pecwa_3955 NC_013421.1 4373917 4374849 D PFAM: phosphatidate cytidylyltransferase; KEGG: pmr:PMI2195 cytidylyltransferase; phosphatidate cytidylyltransferase 4373917..4374849 Pectobacterium wasabiae WPP163 8532383 YP_003261294.1 CDS aceK NC_013421.1 4374842 4376608 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(4374842..4376608) Pectobacterium wasabiae WPP163 8532384 YP_003261295.1 CDS Pecwa_3957 NC_013421.1 4376658 4377965 R TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: pct:PC1_3778 isocitrate lyase; isocitrate lyase complement(4376658..4377965) Pectobacterium wasabiae WPP163 8532385 YP_003261296.1 CDS Pecwa_3958 NC_013421.1 4377997 4379595 R Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase complement(4377997..4379595) Pectobacterium wasabiae WPP163 8532386 YP_003261297.1 CDS Pecwa_3959 NC_013421.1 4379882 4380811 R catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase complement(4379882..4380811) Pectobacterium wasabiae WPP163 8532387 YP_003261298.1 CDS Pecwa_3960 NC_013421.1 4380948 4381319 R KEGG: pct:PC1_3781 uncharacterized protein YjaA; hypothetical protein complement(4380948..4381319) Pectobacterium wasabiae WPP163 8532388 YP_003261299.1 CDS Pecwa_3961 NC_013421.1 4387140 4387688 D KEGG: pct:PC1_3782 transferase; transferase 4387140..4387688 Pectobacterium wasabiae WPP163 8532394 YP_003261300.1 CDS Pecwa_3962 NC_013421.1 4387673 4387930 R PFAM: protein of unknown function DUF1488; KEGG: eca:ECA3994 hypothetical protein; hypothetical protein complement(4387673..4387930) Pectobacterium wasabiae WPP163 8532395 YP_003261301.1 CDS aroE NC_013421.1 4387927 4388754 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(4387927..4388754) Pectobacterium wasabiae WPP163 8532396 YP_003261302.1 CDS Pecwa_3964 NC_013421.1 4388774 4389343 R PFAM: SUA5/yciO/yrdC domain; KEGG: pct:PC1_3785 SUA5/YciO/YrdC domain protein; SUA5/yciO/yrdC domain-containing protein complement(4388774..4389343) Pectobacterium wasabiae WPP163 8532397 YP_003261303.1 CDS Pecwa_3965 NC_013421.1 4389336 4389893 R PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: pct:PC1_3786 DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase type IA zn finger domain-containing protein complement(4389336..4389893) Pectobacterium wasabiae WPP163 8532398 YP_003261304.1 CDS Pecwa_3966 NC_013421.1 4389914 4390387 R PFAM: protein of unknown function DUF494; KEGG: eca:ECA3997 hypothetical protein; hypothetical protein complement(4389914..4390387) Pectobacterium wasabiae WPP163 8532399 YP_003261305.1 CDS Pecwa_3967 NC_013421.1 4390359 4391480 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pct:PC1_3788 DNA protecting protein DprA; DNA protecting protein DprA complement(4390359..4391480) Pectobacterium wasabiae WPP163 8532400 YP_003261306.1 CDS def NC_013421.1 4391609 4392121 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4391609..4392121 Pectobacterium wasabiae WPP163 8532401 YP_003261307.1 CDS fmt NC_013421.1 4392145 4393092 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 4392145..4393092 Pectobacterium wasabiae WPP163 8532402 YP_003261308.1 CDS Pecwa_3970 NC_013421.1 4393160 4394449 D catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase B 4393160..4394449 Pectobacterium wasabiae WPP163 8532403 YP_003261309.1 CDS trkA NC_013421.1 4394506 4395882 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 4394506..4395882 Pectobacterium wasabiae WPP163 8532404 YP_003261310.1 CDS mscL NC_013421.1 4395973 4396386 D forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 4395973..4396386 Pectobacterium wasabiae WPP163 8532405 YP_003261311.1 CDS Pecwa_3973 NC_013421.1 4396420 4396632 R PFAM: protein of unknown function DUF331; KEGG: pct:PC1_3794 hypothetical protein; hypothetical protein complement(4396420..4396632) Pectobacterium wasabiae WPP163 8532406 YP_003261312.1 CDS rplQ NC_013421.1 4396839 4397231 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(4396839..4397231) Pectobacterium wasabiae WPP163 8532407 YP_003261313.1 CDS Pecwa_3975 NC_013421.1 4397272 4398261 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(4397272..4398261) Pectobacterium wasabiae WPP163 8532408 YP_003261314.1 CDS rpsD NC_013421.1 4398287 4398907 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(4398287..4398907) Pectobacterium wasabiae WPP163 8532409 YP_003261315.1 CDS Pecwa_3977 NC_013421.1 4398938 4399327 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(4398938..4399327) Pectobacterium wasabiae WPP163 8532410 YP_003261316.1 CDS rpsM NC_013421.1 4399344 4399700 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(4399344..4399700) Pectobacterium wasabiae WPP163 8532411 YP_003261317.1 CDS rpmJ NC_013421.1 4399847 4399963 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(4399847..4399963) Pectobacterium wasabiae WPP163 8532413 YP_003261318.1 CDS secY NC_013421.1 4399997 4401328 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(4399997..4401328) Pectobacterium wasabiae WPP163 8532414 YP_003261319.1 CDS rplO NC_013421.1 4401336 4401770 R late assembly protein; 50S ribosomal protein L15 complement(4401336..4401770) Pectobacterium wasabiae WPP163 8532415 YP_003261320.1 CDS rpmD NC_013421.1 4401774 4401953 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(4401774..4401953) Pectobacterium wasabiae WPP163 8532416 YP_003261321.1 CDS rpsE NC_013421.1 4401960 4402460 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(4401960..4402460) Pectobacterium wasabiae WPP163 8532417 YP_003261322.1 CDS rplR NC_013421.1 4402475 4402828 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(4402475..4402828) Pectobacterium wasabiae WPP163 8532418 YP_003261323.1 CDS rplF NC_013421.1 4402838 4403371 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(4402838..4403371) Pectobacterium wasabiae WPP163 8532419 YP_003261324.1 CDS rpsH NC_013421.1 4403384 4403776 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(4403384..4403776) Pectobacterium wasabiae WPP163 8532420 YP_003261325.1 CDS rpsN NC_013421.1 4403810 4404115 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(4403810..4404115) Pectobacterium wasabiae WPP163 8532421 YP_003261326.1 CDS rplE NC_013421.1 4404129 4404668 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(4404129..4404668) Pectobacterium wasabiae WPP163 8532422 YP_003261327.1 CDS rplX NC_013421.1 4404683 4404997 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(4404683..4404997) Pectobacterium wasabiae WPP163 8532423 YP_003261328.1 CDS rplN NC_013421.1 4405008 4405379 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(4405008..4405379) Pectobacterium wasabiae WPP163 8532424 YP_003261329.1 CDS rpsQ NC_013421.1 4405543 4405797 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(4405543..4405797) Pectobacterium wasabiae WPP163 8532425 YP_003261330.1 CDS Pecwa_3993 NC_013421.1 4405797 4405988 R TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: pct:PC1_3814 ribosomal protein L29; 50S ribosomal protein L29 complement(4405797..4405988) Pectobacterium wasabiae WPP163 8532426 YP_003261331.1 CDS rplP NC_013421.1 4405988 4406398 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(4405988..4406398) Pectobacterium wasabiae WPP163 8532427 YP_003261332.1 CDS rpsC NC_013421.1 4406411 4407112 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(4406411..4407112) Pectobacterium wasabiae WPP163 8532428 YP_003261333.1 CDS rplV NC_013421.1 4407130 4407462 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(4407130..4407462) Pectobacterium wasabiae WPP163 8532429 YP_003261334.1 CDS rpsS NC_013421.1 4407477 4407755 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(4407477..4407755) Pectobacterium wasabiae WPP163 8532430 YP_003261335.1 CDS rplB NC_013421.1 4407772 4408593 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(4407772..4408593) Pectobacterium wasabiae WPP163 8532431 YP_003261336.1 CDS rplW NC_013421.1 4408611 4408913 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(4408611..4408913) Pectobacterium wasabiae WPP163 8532432 YP_003261337.1 CDS rplD NC_013421.1 4408910 4409515 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(4408910..4409515) Pectobacterium wasabiae WPP163 8532433 YP_003261338.1 CDS rplC NC_013421.1 4409526 4410155 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(4409526..4410155) Pectobacterium wasabiae WPP163 8532434 YP_003261339.1 CDS rpsJ NC_013421.1 4410188 4410499 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(4410188..4410499) Pectobacterium wasabiae WPP163 8532435 YP_003261340.1 CDS Pecwa_4003 NC_013421.1 4410624 4410734 D KEGG: pct:PC1_3824 hypothetical protein; hypothetical protein 4410624..4410734 Pectobacterium wasabiae WPP163 8532436 YP_003261341.1 CDS Pecwa_4004 NC_013421.1 4410807 4411280 R iron storage protein; bacterioferritin complement(4410807..4411280) Pectobacterium wasabiae WPP163 8532437 YP_003261342.1 CDS Pecwa_4005 NC_013421.1 4411353 4411547 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pct:PC1_3826 BFD domain protein (2Fe-2S)-binding domain protein; bacterioferritin-associated ferredoxin complement(4411353..4411547) Pectobacterium wasabiae WPP163 8532438 YP_003261343.1 CDS Pecwa_4006 NC_013421.1 4411752 4412936 R TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: pct:PC1_3827 translation elongation factor Tu; translation elongation factor Tu complement(4411752..4412936) Pectobacterium wasabiae WPP163 8532439 YP_003261344.1 CDS Pecwa_4007 NC_013421.1 4413006 4415120 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(4413006..4415120) Pectobacterium wasabiae WPP163 8532440 YP_003261345.1 CDS Pecwa_4008 NC_013421.1 4415217 4415687 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(4415217..4415687) Pectobacterium wasabiae WPP163 8532441 YP_003261346.1 CDS rpsL NC_013421.1 4415784 4416158 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(4415784..4416158) Pectobacterium wasabiae WPP163 8532443 YP_003261347.1 CDS Pecwa_4011 NC_013421.1 4416290 4416577 R TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: eca:ECA4039 intracellular sulfur oxidation protein; sulfur relay protein TusB/DsrH complement(4416290..4416577) Pectobacterium wasabiae WPP163 8532444 YP_003261348.1 CDS Pecwa_4012 NC_013421.1 4416596 4416955 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC complement(4416596..4416955) Pectobacterium wasabiae WPP163 8532445 YP_003261349.1 CDS Pecwa_4013 NC_013421.1 4416965 4417354 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD complement(4416965..4417354) Pectobacterium wasabiae WPP163 8532446 YP_003261350.1 CDS Pecwa_4014 NC_013421.1 4417354 4418100 R PFAM: YheO domain protein; KEGG: pct:PC1_3834 YheO domain protein; YheO domain-containing protein complement(4417354..4418100) Pectobacterium wasabiae WPP163 8532447 YP_003261351.1 CDS Pecwa_4015 NC_013421.1 4418322 4419968 D with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; cell division protein 4418322..4419968 Pectobacterium wasabiae WPP163 8532448 YP_003261352.1 CDS Pecwa_4016 NC_013421.1 4419965 4420633 D response regulator in two-component regulatory system with BasS; BasR family transcriptional regulator 4419965..4420633 Pectobacterium wasabiae WPP163 8532449 YP_003261353.1 CDS Pecwa_4017 NC_013421.1 4420630 4421724 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eca:ECA4045 sensor protein BasS/PmrB; sensor protein BasS/PmrB 4420630..4421724 Pectobacterium wasabiae WPP163 8532450 YP_003261354.1 CDS glyA NC_013421.1 4421796 4423067 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(4421796..4423067) Pectobacterium wasabiae WPP163 8532451 YP_003261355.1 CDS Pecwa_4019 NC_013421.1 4423101 4423913 R PFAM: alanine racemase domain protein; KEGG: eca:ECA4047 alanine racemase; alanine racemase complement(4423101..4423913) Pectobacterium wasabiae WPP163 8532452 YP_003261356.1 CDS Pecwa_4020 NC_013421.1 4424017 4425516 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: eca:ECA4048 GntR family transcriptional regulator; GntR family transcriptional regulator 4424017..4425516 Pectobacterium wasabiae WPP163 8532453 YP_003261357.1 CDS Pecwa_4021 NC_013421.1 4425705 4426523 R rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase complement(4425705..4426523) Pectobacterium wasabiae WPP163 8532454 YP_003261358.1 CDS Pecwa_4022 NC_013421.1 4426806 4427024 D PFAM: SlyX family protein; KEGG: eca:ECA4050 hypothetical protein; hypothetical protein 4426806..4427024 Pectobacterium wasabiae WPP163 8532455 YP_003261359.1 CDS Pecwa_4023 NC_013421.1 4427127 4427711 R rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase complement(4427127..4427711) Pectobacterium wasabiae WPP163 8532456 YP_003261360.1 CDS Pecwa_4024 NC_013421.1 4427832 4428026 R PFAM: conserved hypothetical protein; KEGG: eca:ECA4055 hypothetical protein; hypothetical protein complement(4427832..4428026) Pectobacterium wasabiae WPP163 8532457 YP_003261361.1 CDS Pecwa_4025 NC_013421.1 4428092 4429903 R involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB complement(4428092..4429903) Pectobacterium wasabiae WPP163 8532458 YP_003261362.1 CDS Pecwa_4026 NC_013421.1 4429905 4430456 R required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG complement(4429905..4430456) Pectobacterium wasabiae WPP163 8532459 YP_003261363.1 CDS Pecwa_4027 NC_013421.1 4430582 4432489 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_3847 ABC transporter; ABC transporter ATP-binding protein 4430582..4432489 Pectobacterium wasabiae WPP163 8532460 YP_003261364.1 CDS Pecwa_4028 NC_013421.1 4432562 4433164 R PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA4059 hypothetical protein; lysine exporter protein LysE/YggA complement(4432562..4433164) Pectobacterium wasabiae WPP163 8532461 YP_003261365.1 CDS Pecwa_4029 NC_013421.1 4433271 4434524 D PFAM: protein of unknown function UPF0270; alpha/beta hydrolase fold; KEGG: eca:ECA4060 hydrolase; hydrolase 4433271..4434524 Pectobacterium wasabiae WPP163 8532462 YP_003261366.1 CDS Pecwa_4030 NC_013421.1 4434647 4435516 D PFAM: phosphoribulokinase/uridine kinase; KEGG: eca:ECA4062 phosphoribulokinase; phosphoribulokinase 4434647..4435516 Pectobacterium wasabiae WPP163 8532463 YP_003261367.1 CDS Pecwa_4031 NC_013421.1 4435682 4436089 R PFAM: OsmC family protein; KEGG: pct:PC1_3852 OsmC family protein; hypothetical protein complement(4435682..4436089) Pectobacterium wasabiae WPP163 8532464 YP_003261368.1 CDS Pecwa_4032 NC_013421.1 4436464 4437096 D complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 4436464..4437096 Pectobacterium wasabiae WPP163 8532465 YP_003261369.1 CDS argD NC_013421.1 4437327 4438553 R DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein complement(4437327..4438553) Pectobacterium wasabiae WPP163 8532466 YP_003261370.1 CDS Pecwa_4034 NC_013421.1 4438673 4439389 R aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II complement(4438673..4439389) Pectobacterium wasabiae WPP163 8532467 YP_003261371.1 CDS Pecwa_4035 NC_013421.1 4439931 4441055 D PFAM: pectate lyase/Amb allergen; SMART: pectate lyase/Amb allergen; KEGG: pct:PC1_3858 pectate lyase/Amb allergen; pectate lyase/Amb allergen 4439931..4441055 Pectobacterium wasabiae WPP163 8532468 YP_003261372.1 CDS Pecwa_4036 NC_013421.1 4441723 4442847 D PFAM: pectate lyase/Amb allergen; SMART: pectate lyase/Amb allergen; KEGG: pct:PC1_3859 pectate lyase/Amb allergen; pectate lyase/Amb allergen 4441723..4442847 Pectobacterium wasabiae WPP163 8532469 YP_003261373.1 CDS Pecwa_4037 NC_013421.1 4443555 4444679 D PFAM: pectate lyase/Amb allergen; SMART: pectate lyase/Amb allergen; KEGG: eca:ECA4069 pectate lyase III; pectate lyase/Amb allergen 4443555..4444679 Pectobacterium wasabiae WPP163 8532470 YP_003261374.1 CDS Pecwa_4038 NC_013421.1 4444842 4446119 D KEGG: eca:ECA4070 pectate lyase; pectate lyase 4444842..4446119 Pectobacterium wasabiae WPP163 8532471 YP_003261375.1 CDS Pecwa_4039 NC_013421.1 4446204 4446773 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: eca:ECA4071 peptidyl-prolyl cis-trans isomerase A (rotamase A); peptidyl-prolyl cis-trans isomerase A complement(4446204..4446773) Pectobacterium wasabiae WPP163 8532472 YP_003261376.1 CDS Pecwa_4040 NC_013421.1 4446977 4447786 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA4072 ABC transporter ATP-binding protein; ABC transporter complement(4446977..4447786) Pectobacterium wasabiae WPP163 8532473 YP_003261377.1 CDS Pecwa_4041 NC_013421.1 4447798 4448685 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_3864 ABC transporter; ABC transporter complement(4447798..4448685) Pectobacterium wasabiae WPP163 8532474 YP_003261378.1 CDS Pecwa_4042 NC_013421.1 4448657 4449580 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4074 ABC transporter permease; binding-protein-dependent transporters inner membrane component complement(4448657..4449580) Pectobacterium wasabiae WPP163 8532475 YP_003261379.1 CDS Pecwa_4043 NC_013421.1 4449577 4450617 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_3866 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(4449577..4450617) Pectobacterium wasabiae WPP163 8532476 YP_003261380.1 CDS Pecwa_4044 NC_013421.1 4450750 4452360 R PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_3867 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(4450750..4452360) Pectobacterium wasabiae WPP163 8532477 YP_003261381.1 CDS Pecwa_4045 NC_013421.1 4452459 4453613 R PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA4077 mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein complement(4452459..4453613) Pectobacterium wasabiae WPP163 8532478 YP_003261382.1 CDS Pecwa_4046 NC_013421.1 4454251 4456803 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: eca:ECA4079 nitrite reductase [NAD(P)H] large subunit; nitrite reductase (NAD(P)H) large subunit 4454251..4456803 Pectobacterium wasabiae WPP163 8532479 YP_003261383.1 CDS nirD NC_013421.1 4456800 4457168 D involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; nitrite reductase small subunit 4456800..4457168 Pectobacterium wasabiae WPP163 8532480 YP_003261384.1 CDS cysG NC_013421.1 4457232 4458611 D multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin; siroheme synthase 4457232..4458611 Pectobacterium wasabiae WPP163 8532481 YP_003261385.1 CDS Pecwa_4049 NC_013421.1 4459149 4459865 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4082 octopine transporter permease; polar amino acid ABC transporter inner membrane protein 4459149..4459865 Pectobacterium wasabiae WPP163 8532482 YP_003261386.1 CDS Pecwa_4050 NC_013421.1 4459865 4460599 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4083 octopine transporter permease; polar amino acid ABC transporter inner membrane protein 4459865..4460599 Pectobacterium wasabiae WPP163 8532483 YP_003261387.1 CDS Pecwa_4051 NC_013421.1 4460596 4461360 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA4084 octopine permease ATP-binding protein P; ABC transporter 4460596..4461360 Pectobacterium wasabiae WPP163 8532484 YP_003261388.1 CDS Pecwa_4052 NC_013421.1 4461437 4462306 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA4085 octopine-binding periplasmic protein; family 3 extracellular solute-binding protein 4461437..4462306 Pectobacterium wasabiae WPP163 8532485 YP_003261389.1 CDS Pecwa_4053 NC_013421.1 4462400 4463857 D TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: eca:ECA4086 aminobenzoyl-glutamate utilization protein B; amidohydrolase 4462400..4463857 Pectobacterium wasabiae WPP163 8532486 YP_003261390.1 CDS Pecwa_4054 NC_013421.1 4463932 4464936 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(4463932..4464936) Pectobacterium wasabiae WPP163 8532487 YP_003261391.1 CDS Pecwa_4055 NC_013421.1 4464933 4465637 R catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase complement(4464933..4465637) Pectobacterium wasabiae WPP163 8532488 YP_003261392.1 CDS Pecwa_4056 NC_013421.1 4465630 4466307 R KEGG: pct:PC1_3879 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(4465630..4466307) Pectobacterium wasabiae WPP163 8532489 YP_003261393.1 CDS Pecwa_4057 NC_013421.1 4466420 4467232 R KEGG: pct:PC1_3880 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase complement(4466420..4467232) Pectobacterium wasabiae WPP163 8532490 YP_003261394.1 CDS Pecwa_4058 NC_013421.1 4467312 4468322 R PFAM: sporulation domain protein; KEGG: eca:ECA4091 hypothetical protein; hypothetical protein complement(4467312..4468322) Pectobacterium wasabiae WPP163 8532491 YP_003261395.1 CDS aroB NC_013421.1 4468489 4469574 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(4468489..4469574) Pectobacterium wasabiae WPP163 8532492 YP_003261396.1 CDS Pecwa_4061 NC_013421.1 4470380 4470478 R hypothetical protein complement(4470380..4470478) Pectobacterium wasabiae WPP163 8532494 YP_003261397.1 CDS hofQ NC_013421.1 4470499 4471773 R outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; outer membrane porin HofQ complement(4470499..4471773) Pectobacterium wasabiae WPP163 8532495 YP_003261398.1 CDS Pecwa_4063 NC_013421.1 4471831 4472211 R KEGG: eca:ECA4095 hypothetical protein; hypothetical protein complement(4471831..4472211) Pectobacterium wasabiae WPP163 8532496 YP_003261399.1 CDS Pecwa_4064 NC_013421.1 4472208 4472795 R KEGG: pct:PC1_3886 hypothetical protein; hypothetical protein complement(4472208..4472795) Pectobacterium wasabiae WPP163 8532497 YP_003261400.1 CDS Pecwa_4065 NC_013421.1 4472788 4473357 R PFAM: fimbrial assembly family protein; KEGG: eca:ECA4097 hypothetical protein; fimbrial assembly family protein complement(4472788..4473357) Pectobacterium wasabiae WPP163 8532498 YP_003261401.1 CDS Pecwa_4066 NC_013421.1 4473360 4474211 R KEGG: pct:PC1_3888 hypothetical protein; hypothetical protein complement(4473360..4474211) Pectobacterium wasabiae WPP163 8532499 YP_003261402.1 CDS mrcA NC_013421.1 4474323 4476878 D bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 4474323..4476878 Pectobacterium wasabiae WPP163 8532500 YP_003261403.1 CDS nudE NC_013421.1 4476963 4477520 R ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE complement(4476963..4477520) Pectobacterium wasabiae WPP163 8532501 YP_003261404.1 CDS Pecwa_4069 NC_013421.1 4477957 4480104 D PFAM: Intracellular growth attenuator IgaA; KEGG: eca:ECA4102 intracellular growth attenuator protein; intracellular growth attenuator igaA 4477957..4480104 Pectobacterium wasabiae WPP163 8532502 YP_003261405.1 CDS Pecwa_4070 NC_013421.1 4480223 4480939 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: pct:PC1_3893 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase 4480223..4480939 Pectobacterium wasabiae WPP163 8532503 YP_003261406.1 CDS Pecwa_4071 NC_013421.1 4481028 4481438 D PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: eca:ECA4104 heat shock protein; RNA-binding S4 domain-containing protein 4481028..4481438 Pectobacterium wasabiae WPP163 8532504 YP_003261407.1 CDS hslO NC_013421.1 4481509 4482378 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 4481509..4482378 Pectobacterium wasabiae WPP163 8532505 YP_003261408.1 CDS Pecwa_4073 NC_013421.1 4482576 4484195 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 4482576..4484195 Pectobacterium wasabiae WPP163 8532506 YP_003261409.1 CDS envZ NC_013421.1 4484391 4485752 R membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein complement(4484391..4485752) Pectobacterium wasabiae WPP163 8532507 YP_003261410.1 CDS ompR NC_013421.1 4485749 4486468 R part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator complement(4485749..4486468) Pectobacterium wasabiae WPP163 8532508 YP_003261411.1 CDS Pecwa_4076 NC_013421.1 4486677 4486805 R KEGG: pct:PC1_3899 hypothetical protein; hypothetical protein complement(4486677..4486805) Pectobacterium wasabiae WPP163 8532509 YP_003261412.1 CDS Pecwa_4077 NC_013421.1 4486819 4487970 R PFAM: periplasmic binding protein; KEGG: eca:ECA4110 periplasmic substrate-binding protein; periplasmic binding protein complement(4486819..4487970) Pectobacterium wasabiae WPP163 8532510 YP_003261413.1 CDS Pecwa_4078 NC_013421.1 4487960 4489213 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4111 transporter; major facilitator superfamily protein complement(4487960..4489213) Pectobacterium wasabiae WPP163 8532511 YP_003261414.1 CDS Pecwa_4079 NC_013421.1 4489380 4491569 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pct:PC1_3905 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(4489380..4491569) Pectobacterium wasabiae WPP163 8532512 YP_003261415.1 CDS Pecwa_4080 NC_013421.1 4492107 4492679 D KEGG: pct:PC1_3907 HpcH/HpaI aldolase; citrate lyase subunit beta-like protein 4492107..4492679 Pectobacterium wasabiae WPP163 8532513 YP_003261416.1 CDS greB NC_013421.1 4492669 4493148 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(4492669..4493148) Pectobacterium wasabiae WPP163 8532514 YP_003261417.1 CDS Pecwa_4082 NC_013421.1 4493480 4495195 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: eca:ECA4119 acyltransferase; phospholipid/glycerol acyltransferase 4493480..4495195 Pectobacterium wasabiae WPP163 8532515 YP_003261418.1 CDS Pecwa_4083 NC_013421.1 4495413 4495559 D hypothetical protein 4495413..4495559 Pectobacterium wasabiae WPP163 8532516 YP_003261419.1 CDS Pecwa_4084 NC_013421.1 4495528 4497195 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: eca:ECA4120 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4495528..4497195 Pectobacterium wasabiae WPP163 8532517 YP_003261420.1 CDS Pecwa_4085 NC_013421.1 4497337 4498620 R KEGG: pct:PC1_3911 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: citrate synthase; citrate synthase I complement(4497337..4498620) Pectobacterium wasabiae WPP163 8532518 YP_003261421.1 CDS Pecwa_4086 NC_013421.1 4499303 4500541 D PFAM: transcriptional regulator, histidine kinase sensor-like; histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ecz:ECS88_4665 conserved hypothetical protein with histidine kinase domain; signal transduction histidine kinase LytS 4499303..4500541 Pectobacterium wasabiae WPP163 8532519 YP_003261422.1 CDS Pecwa_4087 NC_013421.1 4500557 4501609 D PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; KEGG: ecv:APECO1_2301 hypothetical protein; AraC family transcriptional regulator 4500557..4501609 Pectobacterium wasabiae WPP163 8532520 YP_003261423.1 CDS Pecwa_4088 NC_013421.1 4501740 4502918 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 4501740..4502918 Pectobacterium wasabiae WPP163 8532521 YP_003261424.1 CDS Pecwa_4089 NC_013421.1 4502942 4503517 D PFAM: microcompartments protein; KEGG: ecz:ECS88_4661 conserved hypothetical protein with microcompartments protein domain; microcompartments protein 4502942..4503517 Pectobacterium wasabiae WPP163 8532522 YP_003261425.1 CDS Pecwa_4090 NC_013421.1 4503724 4504521 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: ssn:SSON_2057 propanediol diffusion facilitator; MIP family channel protein complement(4503724..4504521) Pectobacterium wasabiae WPP163 8532523 YP_003261426.1 CDS Pecwa_4091 NC_013421.1 4504629 4505546 R KEGG: ecc:c4538 pyruvate formate-lyase 3 activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; glycyl-radical enzyme activating protein family complement(4504629..4505546) Pectobacterium wasabiae WPP163 8532524 YP_003261427.1 CDS Pecwa_4092 NC_013421.1 4505656 4508199 R KEGG: ecz:ECS88_4672 formate C-acetyltransferase; TIGRFAM: pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase complement(4505656..4508199) Pectobacterium wasabiae WPP163 8532525 YP_003261428.1 CDS Pecwa_4093 NC_013421.1 4508279 4508854 R TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: ecz:ECS88_4673 conserved hypothetical protein with intracelllular protease 1 domain; PfpI family intracellular protease complement(4508279..4508854) Pectobacterium wasabiae WPP163 8532526 YP_003261429.1 CDS Pecwa_4094 NC_013421.1 4508865 4509164 R KEGG: ecz:ECS88_4674 hypothetical protein; hypothetical protein complement(4508865..4509164) Pectobacterium wasabiae WPP163 8532527 YP_003261430.1 CDS Pecwa_4095 NC_013421.1 4509190 4510698 R PFAM: aldehyde dehydrogenase; KEGG: ecz:ECS88_4675 acetaldehyde/propionaldehyde dehydrogenase (EutE-like); aldehyde dehydrogenase complement(4509190..4510698) Pectobacterium wasabiae WPP163 8532528 YP_003261431.1 CDS Pecwa_4096 NC_013421.1 4510748 4511533 R PFAM: microcompartments protein; KEGG: ecz:ECS88_4676 propanediol utilization protein, polyhedral bodies (PduB-like); microcompartments protein complement(4510748..4511533) Pectobacterium wasabiae WPP163 8532529 YP_003261432.1 CDS Pecwa_4097 NC_013421.1 4511555 4511836 R PFAM: microcompartments protein; KEGG: ecz:ECS88_4677 propanediol utilization protein, polyhedral bodies (PduA-like); microcompartments protein complement(4511555..4511836) Pectobacterium wasabiae WPP163 8532530 YP_003261433.1 CDS Pecwa_4098 NC_013421.1 4512041 4513252 R catalyzes the formation of propanoyl phosphate from propanoate and ATP; TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism; propionate/acetate kinase complement(4512041..4513252) Pectobacterium wasabiae WPP163 8532531 YP_003261434.1 CDS Pecwa_4099 NC_013421.1 4513276 4513788 R PFAM: protein of unknown function DUF336; KEGG: ecz:ECS88_4680 hypothetical protein; hypothetical protein complement(4513276..4513788) Pectobacterium wasabiae WPP163 8532532 YP_003261435.1 CDS Pecwa_4100 NC_013421.1 4513809 4514081 R PFAM: ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: sgl:SG1884 ethanolamine utilization protein EutN; ethanolamine utilization protein EutN/carboxysome structural protein Ccml complement(4513809..4514081) Pectobacterium wasabiae WPP163 8532533 YP_003261436.1 CDS Pecwa_4101 NC_013421.1 4514063 4514818 R KEGG: ecq:ECED1_3451 hypothetical protein; hypothetical protein complement(4514063..4514818) Pectobacterium wasabiae WPP163 8532534 YP_003261437.1 CDS Pecwa_4102 NC_013421.1 4514906 4515595 R PFAM: propanediol utilization protein; KEGG: ecz:ECS88_4684 conserved hypothetical protein involved in propanediol utilization protein (PduL-like); propanediol utilization protein complement(4514906..4515595) Pectobacterium wasabiae WPP163 8532535 YP_003261438.1 CDS Pecwa_4103 NC_013421.1 4515721 4516836 R PFAM: iron-containing alcohol dehydrogenase; KEGG: ecq:ECED1_3448 propanol dehydrogenase; iron-containing alcohol dehydrogenase complement(4515721..4516836) Pectobacterium wasabiae WPP163 8532536 YP_003261439.1 CDS Pecwa_4104 NC_013421.1 4517186 4519519 D PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: eca:ECA4122 RNA binding protein; hypothetical protein 4517186..4519519 Pectobacterium wasabiae WPP163 8532537 YP_003261440.1 CDS Pecwa_4105 NC_013421.1 4519745 4520533 D PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: eca:ECA4123 regulator of exoenzyme; transcriptional regulator, IclR family 4519745..4520533 Pectobacterium wasabiae WPP163 8532538 YP_003261441.1 CDS Pecwa_4106 NC_013421.1 4520894 4521850 D transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 4520894..4521850 Pectobacterium wasabiae WPP163 8532539 YP_003261442.1 CDS Pecwa_4107 NC_013421.1 4521863 4522699 D 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 4521863..4522699 Pectobacterium wasabiae WPP163 8532540 YP_003261443.1 CDS Pecwa_4108 NC_013421.1 4522772 4523326 R KEGG: dze:Dd1591_0207 hypothetical protein; hypothetical protein complement(4522772..4523326) Pectobacterium wasabiae WPP163 8532541 YP_003261444.1 CDS Pecwa_4109 NC_013421.1 4523323 4523856 R KEGG: sgl:SG0585 hypothetical protein; hypothetical protein complement(4523323..4523856) Pectobacterium wasabiae WPP163 8532542 YP_003261445.1 CDS Pecwa_4110 NC_013421.1 4523846 4524727 R PFAM: protein of unknown function DUF323; KEGG: dze:Dd1591_0206 protein of unknown function DUF323; hypothetical protein complement(4523846..4524727) Pectobacterium wasabiae WPP163 8532543 YP_003261446.1 CDS Pecwa_4111 NC_013421.1 4524970 4526319 R PFAM: protein of unknown function DUF214; KEGG: pct:PC1_3917 hypothetical protein; hypothetical protein complement(4524970..4526319) Pectobacterium wasabiae WPP163 8532544 YP_003261447.1 CDS Pecwa_4112 NC_013421.1 4526316 4527008 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA4128 ABC transporter ATP-binding protein; ABC transporter complement(4526316..4527008) Pectobacterium wasabiae WPP163 8532545 YP_003261448.1 CDS Pecwa_4113 NC_013421.1 4527017 4527496 R KEGG: eca:ECA4129 hypothetical protein; hypothetical protein complement(4527017..4527496) Pectobacterium wasabiae WPP163 8532546 YP_003261449.1 CDS Pecwa_4114 NC_013421.1 4527509 4529254 R PFAM: alkaline phosphatase; SMART: alkaline phosphatase; KEGG: eca:ECA4130 alkaline phosphatase; alkaline phosphatase complement(4527509..4529254) Pectobacterium wasabiae WPP163 8532547 YP_003261450.1 CDS Pecwa_4115 NC_013421.1 4529543 4529821 R hypothetical protein complement(4529543..4529821) Pectobacterium wasabiae WPP163 8532548 YP_003261451.1 CDS Pecwa_4116 NC_013421.1 4530084 4533194 R TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: eca:ECA4131 aminoglycoside/multidrug efflux system; aminoglycoside/multidrug efflux system complement(4530084..4533194) Pectobacterium wasabiae WPP163 8532549 YP_003261452.1 CDS Pecwa_4117 NC_013421.1 4533572 4534339 R TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: eca:ECA4132 biotin biosynthesis protein; bioH protein complement(4533572..4534339) Pectobacterium wasabiae WPP163 8532550 YP_003261453.1 CDS Pecwa_4118 NC_013421.1 4534386 4535087 D involved in high-affinity gluconate transport; gluconate periplasmic binding protein 4534386..4535087 Pectobacterium wasabiae WPP163 8532551 YP_003261454.1 CDS Pecwa_4119 NC_013421.1 4535148 4535723 D cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; DNA uptake protein 4535148..4535723 Pectobacterium wasabiae WPP163 8532552 YP_003261455.1 CDS malQ NC_013421.1 4535794 4537878 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(4535794..4537878) Pectobacterium wasabiae WPP163 8532553 YP_003261456.1 CDS Pecwa_4121 NC_013421.1 4537891 4540413 R KEGG: pct:PC1_3928 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(4537891..4540413) Pectobacterium wasabiae WPP163 8532554 YP_003261457.1 CDS Pecwa_4122 NC_013421.1 4540456 4541214 R represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; GlpR family transcriptional regulator complement(4540456..4541214) Pectobacterium wasabiae WPP163 8532555 YP_003261458.1 CDS Pecwa_4123 NC_013421.1 4541239 4542072 R protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG complement(4541239..4542072) Pectobacterium wasabiae WPP163 8532556 YP_003261459.1 CDS Pecwa_4124 NC_013421.1 4542277 4543488 D KEGG: ect:ECIAI39_4374 carbohydrate kinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein; regulatory protein DeoR; phosphomethylpyrimidine kinase type-1; SMART: regulatory protein DeoR; ribokinase 4542277..4543488 Pectobacterium wasabiae WPP163 8532557 YP_003261460.1 CDS Pecwa_4125 NC_013421.1 4543533 4544456 D PFAM: dihydrodipicolinate synthetase; KEGG: dda:Dd703_0301 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 4543533..4544456 Pectobacterium wasabiae WPP163 8532558 YP_003261461.1 CDS Pecwa_4126 NC_013421.1 4544542 4545024 D PFAM: conserved hypothetical protein; KEGG: dda:Dd703_0300 hypothetical protein; hypothetical protein 4544542..4545024 Pectobacterium wasabiae WPP163 8532559 YP_003261462.1 CDS Pecwa_4127 NC_013421.1 4545026 4546324 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: dda:Dd703_0299 major facilitator superfamily MFS_1; major facilitator superfamily protein 4545026..4546324 Pectobacterium wasabiae WPP163 8532560 YP_003261463.1 CDS Pecwa_4128 NC_013421.1 4546367 4546690 R KEGG: pct:PC1_3931 thiosulfate sulfurtransferase; PFAM: rhodanese; SMART: rhodanese; thiosulfate sulfurtransferase complement(4546367..4546690) Pectobacterium wasabiae WPP163 8532561 YP_003261464.1 CDS glpD NC_013421.1 4547010 4548512 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 4547010..4548512 Pectobacterium wasabiae WPP163 8532562 YP_003261465.1 CDS Pecwa_4131 NC_013421.1 4548800 4549219 D hypothetical protein 4548800..4549219 Pectobacterium wasabiae WPP163 8532564 YP_003261466.1 CDS Pecwa_4132 NC_013421.1 4549359 4551806 R KEGG: pct:PC1_3933 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(4549359..4551806) Pectobacterium wasabiae WPP163 8532565 YP_003261467.1 CDS glgA NC_013421.1 4551882 4553321 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(4551882..4553321) Pectobacterium wasabiae WPP163 8532566 YP_003261468.1 CDS glgC NC_013421.1 4553350 4554627 R catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase complement(4553350..4554627) Pectobacterium wasabiae WPP163 8532567 YP_003261469.1 CDS Pecwa_4135 NC_013421.1 4554663 4556639 R catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; glycogen debranching protein complement(4554663..4556639) Pectobacterium wasabiae WPP163 8532568 YP_003261470.1 CDS Pecwa_4136 NC_013421.1 4556640 4558817 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(4556640..4558817) Pectobacterium wasabiae WPP163 8532569 YP_003261471.1 CDS Pecwa_4137 NC_013421.1 4559202 4560920 D KEGG: pct:PC1_3938 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; signal transduction histidine kinase LytS 4559202..4560920 Pectobacterium wasabiae WPP163 8532570 YP_003261472.1 CDS Pecwa_4138 NC_013421.1 4561004 4561495 D hypothetical protein 4561004..4561495 Pectobacterium wasabiae WPP163 8532571 YP_003261473.1 CDS Pecwa_4139 NC_013421.1 4561670 4562773 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(4561670..4562773) Pectobacterium wasabiae WPP163 8532572 YP_003261474.1 CDS Pecwa_4140 NC_013421.1 4563064 4563657 D YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); dITP- and XTP- hydrolase 4563064..4563657 Pectobacterium wasabiae WPP163 8532573 YP_003261475.1 CDS Pecwa_4142 NC_013421.1 4564305 4566101 D PFAM: glycoside hydrolase; KEGG: eca:ECA4161 beta-hexosaminidase; glycoside hydrolase 4564305..4566101 Pectobacterium wasabiae WPP163 8532575 YP_003261476.1 CDS Pecwa_4143 NC_013421.1 4566160 4566855 R PFAM: pirin; Cupin 2 conserved barrel domain protein; KEGG: eca:ECA4162 hypothetical protein; pirin complement(4566160..4566855) Pectobacterium wasabiae WPP163 8532576 YP_003261477.1 CDS glpC NC_013421.1 4568373 4569584 R anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C complement(4568373..4569584) Pectobacterium wasabiae WPP163 8532579 YP_003261478.1 CDS Pecwa_4147 NC_013421.1 4569581 4570843 R sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B complement(4569581..4570843) Pectobacterium wasabiae WPP163 8532580 YP_003261479.1 CDS glpA NC_013421.1 4570833 4572503 R anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A complement(4570833..4572503) Pectobacterium wasabiae WPP163 8532581 YP_003261480.1 CDS glpT NC_013421.1 4572824 4574173 D catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; sn-glycerol-3-phosphate transporter 4572824..4574173 Pectobacterium wasabiae WPP163 8532582 YP_003261481.1 CDS Pecwa_4150 NC_013421.1 4574272 4575072 R purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium; sugar phosphatase complement(4574272..4575072) Pectobacterium wasabiae WPP163 8532583 YP_003261482.1 CDS Pecwa_4151 NC_013421.1 4575121 4576158 R lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 complement(4575121..4576158) Pectobacterium wasabiae WPP163 8532584 YP_003261483.1 CDS rhtB NC_013421.1 4576291 4576911 D TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4170 homoserine/homoserine lactone efflux protein; homoserine/homoserine lactone efflux protein 4576291..4576911 Pectobacterium wasabiae WPP163 8532585 YP_003261484.1 CDS Pecwa_4153 NC_013421.1 4576982 4577605 R TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA); KEGG: pct:PC1_3963 homoserine/threonine efflux pump; threonine efflux system complement(4576982..4577605) Pectobacterium wasabiae WPP163 8532586 YP_003261485.1 CDS Pecwa_4154 NC_013421.1 4577648 4579474 R functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; ATP-dependent DNA helicase RecQ complement(4577648..4579474) Pectobacterium wasabiae WPP163 8532587 YP_003261486.1 CDS Pecwa_4155 NC_013421.1 4579557 4580423 R catalyzes the hydrolysis of phosphatidylcholine; phospholipase A complement(4579557..4580423) Pectobacterium wasabiae WPP163 8532588 YP_003261487.1 CDS Pecwa_4156 NC_013421.1 4580678 4581166 D PFAM: thioesterase superfamily protein; KEGG: pct:PC1_3966 thioesterase superfamily protein; hypothetical protein 4580678..4581166 Pectobacterium wasabiae WPP163 8532589 YP_003261488.1 CDS Pecwa_4157 NC_013421.1 4581283 4582212 D TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: pct:PC1_3967 RarD protein, DMT superfamily transporter; RarD protein, DMT superfamily transporter 4581283..4582212 Pectobacterium wasabiae WPP163 8532590 YP_003261489.1 CDS Pecwa_4158 NC_013421.1 4582178 4583236 R TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; KEGG: eca:ECA4176 hypothetical protein; membrane protein AbrB complement(4582178..4583236) Pectobacterium wasabiae WPP163 8532591 YP_003261490.1 CDS Pecwa_4159 NC_013421.1 4583425 4584375 R responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA complement(4583425..4584375) Pectobacterium wasabiae WPP163 8532592 YP_003261491.1 CDS Pecwa_4160 NC_013421.1 4584789 4585538 R PFAM: cyclase family protein; KEGG: pct:PC1_3970 cyclase family protein; cyclase family protein complement(4584789..4585538) Pectobacterium wasabiae WPP163 8532593 YP_003261492.1 CDS Pecwa_4161 NC_013421.1 4585637 4585963 R KEGG: eca:ECA0178 hypothetical protein; hypothetical protein complement(4585637..4585963) Pectobacterium wasabiae WPP163 8532594 YP_003261493.1 CDS uvrD NC_013421.1 4585984 4588146 R unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II complement(4585984..4588146) Pectobacterium wasabiae WPP163 8532595 YP_003261494.1 CDS Pecwa_4163 NC_013421.1 4588376 4589092 R YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; flavin mononucleotide phosphatase complement(4588376..4589092) Pectobacterium wasabiae WPP163 8532596 YP_003261495.1 CDS xerC NC_013421.1 4589092 4590027 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(4589092..4590027) Pectobacterium wasabiae WPP163 8532597 YP_003261496.1 CDS Pecwa_4165 NC_013421.1 4590024 4590728 R PFAM: protein of unknown function DUF484; KEGG: pct:PC1_3974 hypothetical protein; hypothetical protein complement(4590024..4590728) Pectobacterium wasabiae WPP163 8532598 YP_003261497.1 CDS dapF NC_013421.1 4590725 4591549 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(4590725..4591549) Pectobacterium wasabiae WPP163 8532599 YP_003261498.1 CDS Pecwa_4167 NC_013421.1 4591627 4591812 R KEGG: eca:ECA4184 lipoprotein; lipoprotein complement(4591627..4591812) Pectobacterium wasabiae WPP163 8532600 YP_003261499.1 CDS cyaY NC_013421.1 4591872 4592192 D defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 4591872..4592192 Pectobacterium wasabiae WPP163 8532601 YP_003261500.1 CDS Pecwa_4169 NC_013421.1 4592230 4593402 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4186 hypothetical protein; major facilitator superfamily protein complement(4592230..4593402) Pectobacterium wasabiae WPP163 8532602 YP_003261501.1 CDS cyaA NC_013421.1 4593451 4596009 R catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase complement(4593451..4596009) Pectobacterium wasabiae WPP163 8532603 YP_003261502.1 CDS hemC NC_013421.1 4596466 4597407 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 4596466..4597407 Pectobacterium wasabiae WPP163 8532604 YP_003261503.1 CDS hemD NC_013421.1 4597404 4598144 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 4597404..4598144 Pectobacterium wasabiae WPP163 8532605 YP_003261504.1 CDS Pecwa_4173 NC_013421.1 4598168 4599292 D PFAM: protein of unknown function DUF513 hemX; KEGG: pct:PC1_3982 uroporphyrinogen-III C-methyltransferase; uroporphyrinogen III C-methyltransferase 4598168..4599292 Pectobacterium wasabiae WPP163 8532606 YP_003261505.1 CDS Pecwa_4174 NC_013421.1 4599295 4600488 D TIGRFAM: HemY protein; PFAM: HemY domain protein; hypothetical protein; KEGG: eca:ECA4191 protoheme IX biogenesis protein; protoheme IX biogenesis protein 4599295..4600488 Pectobacterium wasabiae WPP163 8532607 YP_003261506.1 CDS Pecwa_4175 NC_013421.1 4601073 4601723 R PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pct:PC1_3984 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(4601073..4601723) Pectobacterium wasabiae WPP163 8532608 YP_003261507.1 CDS Pecwa_4176 NC_013421.1 4602048 4603400 D PFAM: MmgE/PrpD family protein; KEGG: pct:PC1_3985 MmgE/PrpD family protein; MmgE/PrpD family protein 4602048..4603400 Pectobacterium wasabiae WPP163 8532609 YP_003261508.1 CDS Pecwa_4177 NC_013421.1 4603465 4604790 D PFAM: MmgE/PrpD family protein; KEGG: pct:PC1_3986 MmgE/PrpD family protein; MmgE/PrpD family protein 4603465..4604790 Pectobacterium wasabiae WPP163 8532610 YP_003261509.1 CDS Pecwa_4178 NC_013421.1 4604888 4605649 D PFAM: protein of unknown function DUF81; KEGG: pct:PC1_3987 hypothetical protein; hypothetical protein 4604888..4605649 Pectobacterium wasabiae WPP163 8532611 YP_003261510.1 CDS Pecwa_4179 NC_013421.1 4605920 4606972 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pct:PC1_3988 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 4605920..4606972 Pectobacterium wasabiae WPP163 8532612 YP_003261511.1 CDS Pecwa_4180 NC_013421.1 4607014 4608318 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_3989 polar amino acid ABC transporter inner membrane protein; polar amino acid ABC transporter inner membrane protein 4607014..4608318 Pectobacterium wasabiae WPP163 8532613 YP_003261512.1 CDS Pecwa_4181 NC_013421.1 4608329 4609438 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_3990 polar amino acid ABC transporter inner membrane protein; polar amino acid ABC transporter inner membrane protein 4608329..4609438 Pectobacterium wasabiae WPP163 8532614 YP_003261513.1 CDS Pecwa_4182 NC_013421.1 4609481 4610266 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_3991 ABC transporter; ABC transporter 4609481..4610266 Pectobacterium wasabiae WPP163 8532615 YP_003261514.1 CDS Pecwa_4183 NC_013421.1 4610324 4611481 R KEGG: eca:ECA4192 peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(4610324..4611481) Pectobacterium wasabiae WPP163 8532616 YP_003261515.1 CDS Pecwa_4184 NC_013421.1 4611559 4612320 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_3993 ABC transporter; ABC transporter complement(4611559..4612320) Pectobacterium wasabiae WPP163 8532617 YP_003261516.1 CDS Pecwa_4185 NC_013421.1 4612330 4613001 R TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4194 amino-acid ABC transporter permease; polar amino acid ABC transporter inner membrane protein complement(4612330..4613001) Pectobacterium wasabiae WPP163 8532618 YP_003261517.1 CDS Pecwa_4186 NC_013421.1 4613087 4613878 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA4195 amino-acid ABC transporter binding protein; family 3 extracellular solute-binding protein complement(4613087..4613878) Pectobacterium wasabiae WPP163 8532619 YP_003261518.1 CDS Pecwa_4187 NC_013421.1 4613875 4614417 R PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_3996 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4613875..4614417) Pectobacterium wasabiae WPP163 8532620 YP_003261519.1 CDS Pecwa_4188 NC_013421.1 4614427 4615791 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(4614427..4615791) Pectobacterium wasabiae WPP163 8532621 YP_003261520.1 CDS Pecwa_4189 NC_013421.1 4616040 4617341 D PFAM: histidine acid phosphatase; KEGG: eca:ECA4198 exported phosphatase; acid phosphatase 4616040..4617341 Pectobacterium wasabiae WPP163 8532622 YP_003261521.1 CDS Pecwa_4190 NC_013421.1 4617403 4618479 R PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: kpe:KPK_1827 glycerol dehydrogenase; iron-containing alcohol dehydrogenase complement(4617403..4618479) Pectobacterium wasabiae WPP163 8532623 YP_003261522.1 CDS Pecwa_4191 NC_013421.1 4618734 4619543 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA4195 amino-acid ABC transporter binding protein; family 3 extracellular solute-binding protein 4618734..4619543 Pectobacterium wasabiae WPP163 8532624 YP_003261523.1 CDS Pecwa_4192 NC_013421.1 4620511 4621260 R KEGG: pct:PC1_4000 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; UDP-N-acetyl-D-mannosaminuronic acid transferase complement(4620511..4621260) Pectobacterium wasabiae WPP163 8532629 YP_003261524.1 CDS Pecwa_4193 NC_013421.1 4621257 4622648 R enterobacterial common antigen polymerase; common antigen polymerase complement(4621257..4622648) Pectobacterium wasabiae WPP163 8532630 YP_003261525.1 CDS Pecwa_4194 NC_013421.1 4622645 4623730 R catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase complement(4622645..4623730) Pectobacterium wasabiae WPP163 8532631 YP_003261526.1 CDS Pecwa_4195 NC_013421.1 4623727 4624977 R PFAM: polysaccharide biosynthesis protein; KEGG: pct:PC1_4003 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(4623727..4624977) Pectobacterium wasabiae WPP163 8532632 YP_003261527.1 CDS Pecwa_4196 NC_013421.1 4624979 4626109 R catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase complement(4624979..4626109) Pectobacterium wasabiae WPP163 8532633 YP_003261528.1 CDS Pecwa_4197 NC_013421.1 4626114 4626845 R TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_4005 TDP-D-fucosamine acetyltransferase; TDP-fucosamine acetyltransferase complement(4626114..4626845) Pectobacterium wasabiae WPP163 8532634 YP_003261529.1 CDS Pecwa_4198 NC_013421.1 4626884 4627951 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: eca:ECA4206 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(4626884..4627951) Pectobacterium wasabiae WPP163 8532635 YP_003261530.1 CDS wecC NC_013421.1 4627948 4629210 R catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase complement(4627948..4629210) Pectobacterium wasabiae WPP163 8532636 YP_003261531.1 CDS Pecwa_4200 NC_013421.1 4629327 4630457 R KEGG: pct:PC1_4008 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(4629327..4630457) Pectobacterium wasabiae WPP163 8532637 YP_003261532.1 CDS Pecwa_4201 NC_013421.1 4630525 4631571 R Enterobacterial Common antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE complement(4630525..4631571) Pectobacterium wasabiae WPP163 8532638 YP_003261533.1 CDS Pecwa_4202 NC_013421.1 4631593 4632675 R TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase, family 4, conserved region; KEGG: eca:ECA4210 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase complement(4631593..4632675) Pectobacterium wasabiae WPP163 8532639 YP_003261534.1 CDS rho NC_013421.1 4633038 4634390 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(4633038..4634390) Pectobacterium wasabiae WPP163 8532640 YP_003261535.1 CDS Pecwa_4204 NC_013421.1 4634792 4635118 R TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: eca:ECA4212 thioredoxin; thioredoxin complement(4634792..4635118) Pectobacterium wasabiae WPP163 8532641 YP_003261536.1 CDS Pecwa_4205 NC_013421.1 4635348 4636640 D enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 4635348..4636640 Pectobacterium wasabiae WPP163 8532642 YP_003261537.1 CDS Pecwa_4206 NC_013421.1 4636647 4638143 D catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; guanosine pentaphosphate phosphohydrolase 4636647..4638143 Pectobacterium wasabiae WPP163 8532643 YP_003261538.1 CDS Pecwa_4207 NC_013421.1 4638163 4640184 R single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep complement(4638163..4640184) Pectobacterium wasabiae WPP163 8532644 YP_003261539.1 CDS Pecwa_4208 NC_013421.1 4640346 4640627 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: eca:ECA4216 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase 4640346..4640627 Pectobacterium wasabiae WPP163 8532645 YP_003261540.1 CDS putA NC_013421.1 4640704 4644672 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(4640704..4644672) Pectobacterium wasabiae WPP163 8532646 YP_003261541.1 CDS Pecwa_4210 NC_013421.1 4644869 4646353 D TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: eca:ECA4218 sodium/proline symporter; sodium/proline symporter 4644869..4646353 Pectobacterium wasabiae WPP163 8532647 YP_003261542.1 CDS Pecwa_4211 NC_013421.1 4646397 4647284 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_4019 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4646397..4647284) Pectobacterium wasabiae WPP163 8532648 YP_003261543.1 CDS Pecwa_4212 NC_013421.1 4647386 4648039 D PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: eca:ECA4220 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 4647386..4648039 Pectobacterium wasabiae WPP163 8532649 YP_003261544.1 CDS Pecwa_4213 NC_013421.1 4648133 4649611 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(4648133..4649611) Pectobacterium wasabiae WPP163 8532650 YP_003261545.1 CDS Pecwa_4214 NC_013421.1 4649797 4650687 D participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; IlvY family transcriptional regulator 4649797..4650687 Pectobacterium wasabiae WPP163 8532651 YP_003261546.1 CDS Pecwa_4215 NC_013421.1 4650684 4651484 D KEGG: eca:ECA4223 hypothetical protein; hypothetical protein 4650684..4651484 Pectobacterium wasabiae WPP163 8532652 YP_003261547.1 CDS Pecwa_4216 NC_013421.1 4651503 4652246 R PFAM: conserved hypothetical protein; KEGG: eca:ECA4224 hypothetical protein; hypothetical protein complement(4651503..4652246) Pectobacterium wasabiae WPP163 8532653 YP_003261548.1 CDS Pecwa_4217 NC_013421.1 4652340 4653884 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(4652340..4653884) Pectobacterium wasabiae WPP163 8532654 YP_003261549.1 CDS Pecwa_4218 NC_013421.1 4653890 4655740 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(4653890..4655740) Pectobacterium wasabiae WPP163 8532655 YP_003261550.1 CDS Pecwa_4219 NC_013421.1 4655874 4656800 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(4655874..4656800) Pectobacterium wasabiae WPP163 8532656 YP_003261551.1 CDS ilvM NC_013421.1 4656826 4657086 R KEGG: eca:ECA4228 acetolactate synthase 2 regulatory subunit; acetolactate synthase 2 regulatory subunit complement(4656826..4657086) Pectobacterium wasabiae WPP163 8532657 YP_003261552.1 CDS Pecwa_4221 NC_013421.1 4657144 4658790 R catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit complement(4657144..4658790) Pectobacterium wasabiae WPP163 8532658 YP_003261553.1 CDS Pecwa_4222 NC_013421.1 4659136 4659294 D hypothetical protein 4659136..4659294 Pectobacterium wasabiae WPP163 8532659 YP_003261554.1 CDS Pecwa_4223 NC_013421.1 4659437 4660963 D KEGG: eca:ECA4230 magnesium-chelatase; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; Mg chelatase subunit ChlI 4659437..4660963 Pectobacterium wasabiae WPP163 8532660 YP_003261555.1 CDS Pecwa_4224 NC_013421.1 4661017 4661355 R PFAM: protein of unknown function DUF413; KEGG: pct:PC1_4034 hypothetical protein; hypothetical protein complement(4661017..4661355) Pectobacterium wasabiae WPP163 8532661 YP_003261556.1 CDS Pecwa_4225 NC_013421.1 4661476 4662303 D negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR 4661476..4662303 Pectobacterium wasabiae WPP163 8532662 YP_003261557.1 CDS Pecwa_4226 NC_013421.1 4662591 4663553 R membrane component of a sugar ABC transporter system; inner membrane ABC transporter permease YjfF complement(4662591..4663553) Pectobacterium wasabiae WPP163 8532663 YP_003261558.1 CDS Pecwa_4227 NC_013421.1 4663553 4664563 R PFAM: inner-membrane translocator; KEGG: pct:PC1_4037 inner-membrane translocator; inner-membrane translocator complement(4663553..4664563) Pectobacterium wasabiae WPP163 8532664 YP_003261559.1 CDS Pecwa_4228 NC_013421.1 4664550 4666070 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA4235 ABC transporter ATP-binding protein; ABC transporter complement(4664550..4666070) Pectobacterium wasabiae WPP163 8532665 YP_003261560.1 CDS Pecwa_4229 NC_013421.1 4666260 4667216 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pct:PC1_4039 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(4666260..4667216) Pectobacterium wasabiae WPP163 8532666 YP_003261561.1 CDS hemG NC_013421.1 4673464 4674003 R catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase complement(4673464..4674003) Pectobacterium wasabiae WPP163 8532673 YP_003261562.1 CDS Pecwa_4231 NC_013421.1 4674025 4675476 R TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: eca:ECA0211 potassium transporter; potassium transporter complement(4674025..4675476) Pectobacterium wasabiae WPP163 8532674 YP_003261563.1 CDS Pecwa_4232 NC_013421.1 4675520 4676131 R PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: pct:PC1_4042 hypothetical protein; hypothetical protein complement(4675520..4676131) Pectobacterium wasabiae WPP163 8532675 YP_003261564.1 CDS Pecwa_4233 NC_013421.1 4676131 4677462 R catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase complement(4676131..4677462) Pectobacterium wasabiae WPP163 8532676 YP_003261565.1 CDS fadB NC_013421.1 4677648 4679837 D includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 4677648..4679837 Pectobacterium wasabiae WPP163 8532677 YP_003261566.1 CDS fadA NC_013421.1 4679849 4681012 D FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 4679849..4681012 Pectobacterium wasabiae WPP163 8532678 YP_003261567.1 CDS Pecwa_4236 NC_013421.1 4681127 4682134 R KEGG: pmr:PMI1215 hypothetical protein; hypothetical protein complement(4681127..4682134) Pectobacterium wasabiae WPP163 8532679 YP_003261568.1 CDS fre NC_013421.1 4682327 4683028 R NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase complement(4682327..4683028) Pectobacterium wasabiae WPP163 8532680 YP_003261569.1 CDS Pecwa_4238 NC_013421.1 4683081 4684577 R catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(4683081..4684577) Pectobacterium wasabiae WPP163 8532681 YP_003261570.1 CDS rfaH NC_013421.1 4684778 4685266 D KEGG: pct:PC1_4048 transcriptional acivator RfaH; TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; SMART: NGN domain protein; transcriptional activator RfaH 4684778..4685266 Pectobacterium wasabiae WPP163 8532682 YP_003261571.1 CDS Pecwa_4240 NC_013421.1 4685329 4686351 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(4685329..4686351) Pectobacterium wasabiae WPP163 8532683 YP_003261572.1 CDS Pecwa_4241 NC_013421.1 4686369 4687151 R magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD complement(4686369..4687151) Pectobacterium wasabiae WPP163 8532684 YP_003261573.1 CDS Pecwa_4242 NC_013421.1 4687233 4687982 R with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC complement(4687233..4687982) Pectobacterium wasabiae WPP163 8532685 YP_003261574.1 CDS Pecwa_4243 NC_013421.1 4687986 4688597 R TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: eca:ECA0200 sec-independent protein translocase; twin-arginine translocation protein TatB complement(4687986..4688597) Pectobacterium wasabiae WPP163 8532686 YP_003261575.1 CDS Pecwa_4244 NC_013421.1 4688601 4688861 R TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: eca:ECA0199 sec-independent protein translocase; twin-arginine translocation protein, TatA/E family subunit complement(4688601..4688861) Pectobacterium wasabiae WPP163 8532687 YP_003261576.1 CDS ubiB NC_013421.1 4688944 4690584 R an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB complement(4688944..4690584) Pectobacterium wasabiae WPP163 8532688 YP_003261577.1 CDS Pecwa_4246 NC_013421.1 4690581 4691204 R PFAM: sterol-binding domain protein; KEGG: pct:PC1_4055 sterol-binding domain protein; sterol-binding domain protein complement(4690581..4691204) Pectobacterium wasabiae WPP163 8532689 YP_003261578.1 CDS Pecwa_4247 NC_013421.1 4691217 4691972 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: pct:PC1_4056 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase complement(4691217..4691972) Pectobacterium wasabiae WPP163 8532690 YP_003261579.1 CDS Pecwa_4248 NC_013421.1 4692113 4693669 R PFAM: protein of unknown function DUF195; KEGG: eca:ECA0195 DNA recombination protein; hypothetical protein complement(4692113..4693669) Pectobacterium wasabiae WPP163 8532691 YP_003261580.1 CDS Pecwa_4249 NC_013421.1 4693900 4695273 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(4693900..4695273) Pectobacterium wasabiae WPP163 8532692 YP_003261581.1 CDS Pecwa_4250 NC_013421.1 4695336 4696109 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(4695336..4696109) Pectobacterium wasabiae WPP163 8532693 YP_003261582.1 CDS argC NC_013421.1 4696147 4697151 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(4696147..4697151) Pectobacterium wasabiae WPP163 8532694 YP_003261583.1 CDS Pecwa_4252 NC_013421.1 4697354 4698505 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 4697354..4698505 Pectobacterium wasabiae WPP163 8532695 YP_003261584.1 CDS Pecwa_4253 NC_013421.1 4698560 4699273 D PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0190 GntR family transcriptional regulator; GntR family transcriptional regulator 4698560..4699273 Pectobacterium wasabiae WPP163 8532696 YP_003261585.1 CDS Pecwa_4254 NC_013421.1 4699280 4700479 R PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0189 mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein complement(4699280..4700479) Pectobacterium wasabiae WPP163 8532697 YP_003261586.1 CDS Pecwa_4255 NC_013421.1 4700801 4702183 D PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: eca:ECA0188 PTS system, IIABC component; PTS system transporter subunit IIC 4700801..4702183 Pectobacterium wasabiae WPP163 8532698 YP_003261587.1 CDS Pecwa_4256 NC_013421.1 4702651 4703169 D TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: pct:PC1_0054 type VI secretion system effector, Hcp1 family; type VI secretion system effector 4702651..4703169 Pectobacterium wasabiae WPP163 8532699 YP_003261588.1 CDS Pecwa_4257 NC_013421.1 4703358 4705190 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: dze:Dd1591_2559 type VI secretion system Vgr family protein; ImpA family type VI secretion-associated protein 4703358..4705190 Pectobacterium wasabiae WPP163 8532700 YP_003261589.1 CDS Pecwa_4258 NC_013421.1 4705214 4705723 D PFAM: PAAR repeat-containing protein; KEGG: dze:Dd1591_2560 PaaR repeat-containing protein; PAAR repeat-containing protein 4705214..4705723 Pectobacterium wasabiae WPP163 8532701 YP_003261590.1 CDS Pecwa_4259 NC_013421.1 4705724 4706668 D KEGG: ecz:ECS88_3099 hypothetical protein; hypothetical protein 4705724..4706668 Pectobacterium wasabiae WPP163 8532702 YP_003261591.1 CDS Pecwa_4260 NC_013421.1 4706734 4707213 D hypothetical protein 4706734..4707213 Pectobacterium wasabiae WPP163 8532703 YP_003261592.1 CDS Pecwa_4261 NC_013421.1 4707424 4707954 D hypothetical protein 4707424..4707954 Pectobacterium wasabiae WPP163 8532704 YP_003261593.1 CDS Pecwa_4263 NC_013421.1 4709356 4710135 D SMART: ankyrin; KEGG: pct:PC1_3236 ankyrin; ankyrin 4709356..4710135 Pectobacterium wasabiae WPP163 8532706 YP_003261594.1 CDS Pecwa_4264 NC_013421.1 4710132 4710899 D SMART: ankyrin; KEGG: eca:ECA3424 lipoprotein; ankyrin 4710132..4710899 Pectobacterium wasabiae WPP163 8532707 YP_003261595.1 CDS Pecwa_4265 NC_013421.1 4710896 4711663 D SMART: ankyrin; KEGG: eca:ECA3425 lipoprotein; ankyrin 4710896..4711663 Pectobacterium wasabiae WPP163 8532708 YP_003261596.1 CDS Pecwa_4266 NC_013421.1 4711729 4712427 D PFAM: ankyrin; SMART: ankyrin; KEGG: pct:PC1_3236 ankyrin; ankyrin 4711729..4712427 Pectobacterium wasabiae WPP163 8532709 YP_003261597.1 CDS Pecwa_4268 NC_013421.1 4713540 4714457 D KEGG: pct:PC1_3234 hypothetical protein; hypothetical protein 4713540..4714457 Pectobacterium wasabiae WPP163 8532711 YP_003261598.1 CDS Pecwa_4270 NC_013421.1 4719717 4720094 D hypothetical protein 4719717..4720094 Pectobacterium wasabiae WPP163 8532713 YP_003261599.1 CDS Pecwa_4272 NC_013421.1 4720572 4721063 D PFAM: cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: pfl:PFL_4085 hypothetical protein; cell wall assembly/cell proliferation coordinating protein 4720572..4721063 Pectobacterium wasabiae WPP163 8532715 YP_003261600.1 CDS Pecwa_4273 NC_013421.1 4721124 4721315 R PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: eca:ECA4289 hypothetical protein; hypothetical protein complement(4721124..4721315) Pectobacterium wasabiae WPP163 8532716 YP_003261601.1 CDS Pecwa_4275 NC_013421.1 4721553 4722041 D hypothetical protein 4721553..4722041 Pectobacterium wasabiae WPP163 8532718 YP_003261602.1 CDS Pecwa_4276 NC_013421.1 4722169 4722414 D KEGG: eca:ECA3411 hypothetical protein; hypothetical protein 4722169..4722414 Pectobacterium wasabiae WPP163 8532719 YP_003261603.1 CDS Pecwa_4280 NC_013421.1 4723251 4723910 D KEGG: yps:YPTB3279 hypothetical protein; hypothetical protein 4723251..4723910 Pectobacterium wasabiae WPP163 8532723 YP_003261604.1 CDS Pecwa_4283 NC_013421.1 4724642 4724944 D hypothetical protein 4724642..4724944 Pectobacterium wasabiae WPP163 8532726 YP_003261605.1 CDS Pecwa_4284 NC_013421.1 4724949 4725611 D hypothetical protein 4724949..4725611 Pectobacterium wasabiae WPP163 8532727 YP_003261606.1 CDS Pecwa_4287 NC_013421.1 4726632 4727147 D hypothetical protein 4726632..4727147 Pectobacterium wasabiae WPP163 8532730 YP_003261607.1 CDS Pecwa_4290 NC_013421.1 4728047 4728517 D PFAM: cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: plu:plu0342 hypothetical protein; cell wall assembly/cell proliferation coordinating protein 4728047..4728517 Pectobacterium wasabiae WPP163 8532733 YP_003261608.1 CDS Pecwa_4295 NC_013421.1 4730706 4731032 D KEGG: pay:PAU_01169 hypothetical protein; hypothetical protein 4730706..4731032 Pectobacterium wasabiae WPP163 8532738 YP_003261609.1 CDS Pecwa_4299 NC_013421.1 4731691 4732023 D KEGG: eca:ECA2119 hypothetical protein; hypothetical protein 4731691..4732023 Pectobacterium wasabiae WPP163 8532742 YP_003261610.1 CDS Pecwa_4302 NC_013421.1 4732813 4733241 D KEGG: aci:ACIAD2705 hypothetical protein; hypothetical protein 4732813..4733241 Pectobacterium wasabiae WPP163 8532745 YP_003261611.1 CDS Pecwa_4303 NC_013421.1 4733304 4733519 R KEGG: eca:ECA3402 hypothetical protein; hypothetical protein complement(4733304..4733519) Pectobacterium wasabiae WPP163 8532746 YP_003261612.1 CDS Pecwa_4305 NC_013421.1 4734198 4734707 D PFAM: cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: bcj:BCAS0662 hypothetical protein; cell wall assembly/cell proliferation coordinating protein 4734198..4734707 Pectobacterium wasabiae WPP163 8532748 YP_003261613.1 CDS Pecwa_4306 NC_013421.1 4734768 4735001 R PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: eca:ECA3402 hypothetical protein; hypothetical protein complement(4734768..4735001) Pectobacterium wasabiae WPP163 8532749 YP_003261614.1 CDS Pecwa_4307 NC_013421.1 4735207 4735698 D hypothetical protein 4735207..4735698 Pectobacterium wasabiae WPP163 8532750 YP_003261615.1 CDS Pecwa_4309 NC_013421.1 4736114 4736401 D KEGG: hch:HCH_03841 hypothetical protein; hypothetical protein 4736114..4736401 Pectobacterium wasabiae WPP163 8532752 YP_003261616.1 CDS Pecwa_4312 NC_013421.1 4737038 4737421 D KEGG: efe:EFER_1460 hypothetical protein; hypothetical protein 4737038..4737421 Pectobacterium wasabiae WPP163 8532755 YP_003261617.1 CDS Pecwa_4314 NC_013421.1 4737837 4738418 D hypothetical protein 4737837..4738418 Pectobacterium wasabiae WPP163 8532757 YP_003261618.1 CDS Pecwa_4315 NC_013421.1 4738869 4739339 D PFAM: cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: plu:plu0342 hypothetical protein; cell wall assembly/cell proliferation coordinating protein 4738869..4739339 Pectobacterium wasabiae WPP163 8532758 YP_003261619.1 CDS Pecwa_4317 NC_013421.1 4740117 4740560 D PFAM: cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: esa:ESA_03887 hypothetical protein; cell wall assembly/cell proliferation coordinating protein 4740117..4740560 Pectobacterium wasabiae WPP163 8532760 YP_003261620.1 CDS Pecwa_4318 NC_013421.1 4740880 4741185 D hypothetical protein 4740880..4741185 Pectobacterium wasabiae WPP163 8532761 YP_003261621.1 CDS Pecwa_4319 NC_013421.1 4741349 4741837 D hypothetical protein 4741349..4741837 Pectobacterium wasabiae WPP163 8532762 YP_003261622.1 CDS Pecwa_4321 NC_013421.1 4742813 4743271 D hypothetical protein 4742813..4743271 Pectobacterium wasabiae WPP163 8532764 YP_003261623.1 CDS Pecwa_4322 NC_013421.1 4743731 4744207 R hypothetical protein complement(4743731..4744207) Pectobacterium wasabiae WPP163 8532765 YP_003261624.1 CDS Pecwa_4324 NC_013421.1 4744798 4745274 D KEGG: eum:ECUMN_4031 hypothetical protein; hypothetical protein 4744798..4745274 Pectobacterium wasabiae WPP163 8532767 YP_003261625.1 CDS Pecwa_4326 NC_013421.1 4745659 4746588 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4305 LysR family transcriptional regulator; LysR family transcriptional regulator 4745659..4746588 Pectobacterium wasabiae WPP163 8532769 YP_003261626.1 CDS Pecwa_4327 NC_013421.1 4746575 4747267 R KEGG: eca:ECA4304 hypothetical protein; hypothetical protein complement(4746575..4747267) Pectobacterium wasabiae WPP163 8532770 YP_003261627.1 CDS Pecwa_4328 NC_013421.1 4747302 4750073 R KEGG: eca:ECA4303 hypothetical protein; hypothetical protein complement(4747302..4750073) Pectobacterium wasabiae WPP163 8532771 YP_003261628.1 CDS Pecwa_4329 NC_013421.1 4750078 4752282 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pct:PC1_0144 TonB-dependent receptor; TonB-dependent receptor complement(4750078..4752282) Pectobacterium wasabiae WPP163 8532772 YP_003261629.1 CDS Pecwa_4330 NC_013421.1 4752432 4753439 R PFAM: NMT1/THI5 like domain protein; KEGG: eca:ECA4301 sulfate ester binding protein; NMT1/THI5 like domain-containing protein complement(4752432..4753439) Pectobacterium wasabiae WPP163 8532773 YP_003261630.1 CDS Pecwa_4331 NC_013421.1 4753881 4754747 D TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: eca:ECA4300 TonB protein; TonB family protein 4753881..4754747 Pectobacterium wasabiae WPP163 8532774 YP_003261631.1 CDS Pecwa_4332 NC_013421.1 4754758 4755474 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: pct:PC1_0147 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 4754758..4755474 Pectobacterium wasabiae WPP163 8532775 YP_003261632.1 CDS Pecwa_4333 NC_013421.1 4755476 4755877 D PFAM: biopolymertransporter ExbD/TolR; KEGG: pct:PC1_0148 biopolymer transporter ExbD/TolR; biopolymertransporter ExbD/TolR 4755476..4755877 Pectobacterium wasabiae WPP163 8532776 YP_003261633.1 CDS Pecwa_4334 NC_013421.1 4755899 4757509 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4297 sulfate ester ABC transporter permease protein; binding-protein-dependent transporters inner membrane component 4755899..4757509 Pectobacterium wasabiae WPP163 8532777 YP_003261634.1 CDS Pecwa_4335 NC_013421.1 4757527 4758270 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA4296 sulfate ester ABC transporter ATP-binding protein; ABC transporter 4757527..4758270 Pectobacterium wasabiae WPP163 8532778 YP_003261635.1 CDS Pecwa_4336 NC_013421.1 4758996 4759586 D KEGG: vap:Vapar_5783 hypothetical protein; hypothetical protein 4758996..4759586 Pectobacterium wasabiae WPP163 8532779 YP_003261636.1 CDS Pecwa_4337 NC_013421.1 4759743 4760072 D hypothetical protein 4759743..4760072 Pectobacterium wasabiae WPP163 8532780 YP_003261637.1 CDS Pecwa_4338 NC_013421.1 4760187 4760516 D KEGG: pct:PC1_3226 hypothetical protein; hypothetical protein 4760187..4760516 Pectobacterium wasabiae WPP163 8532781 YP_003261638.1 CDS Pecwa_4339 NC_013421.1 4760782 4761171 D KEGG: esa:ESA_pESA3p05511 hypothetical protein; hypothetical protein 4760782..4761171 Pectobacterium wasabiae WPP163 8532782 YP_003261639.1 CDS Pecwa_4340 NC_013421.1 4761385 4761732 D KEGG: plu:plu0341 hypothetical protein; hypothetical protein 4761385..4761732 Pectobacterium wasabiae WPP163 8532783 YP_003261640.1 CDS Pecwa_4341 NC_013421.1 4762076 4762342 D KEGG: pst:PSPTO_0093 hypothetical protein; hypothetical protein 4762076..4762342 Pectobacterium wasabiae WPP163 8532784 YP_003261641.1 CDS Pecwa_4342 NC_013421.1 4762524 4762814 D PFAM: Barstar (barnase inhibitor); KEGG: pct:PC1_3227 barstar (barnase inhibitor); barnase inhibitor 4762524..4762814 Pectobacterium wasabiae WPP163 8532785 YP_003261642.1 CDS Pecwa_4343 NC_013421.1 4763032 4763700 D KEGG: yps:YPTB3279 hypothetical protein; hypothetical protein 4763032..4763700 Pectobacterium wasabiae WPP163 8532786 YP_003261643.1 CDS Pecwa_4344 NC_013421.1 4763969 4764232 D KEGG: plu:plu3111 hypothetical protein; hypothetical protein 4763969..4764232 Pectobacterium wasabiae WPP163 8532787 YP_003261644.1 CDS Pecwa_4345 NC_013421.1 4764514 4764981 D hypothetical protein 4764514..4764981 Pectobacterium wasabiae WPP163 8532788 YP_003261645.1 CDS Pecwa_4346 NC_013421.1 4764974 4765348 D KEGG: pct:PC1_3229 hypothetical protein; hypothetical protein 4764974..4765348 Pectobacterium wasabiae WPP163 8532789 YP_003261646.1 CDS Pecwa_4347 NC_013421.1 4765600 4766058 D hypothetical protein 4765600..4766058 Pectobacterium wasabiae WPP163 8532790 YP_003261647.1 CDS Pecwa_4348 NC_013421.1 4766190 4766426 D hypothetical protein 4766190..4766426 Pectobacterium wasabiae WPP163 8532791 YP_003261648.1 CDS Pecwa_4349 NC_013421.1 4766482 4767018 D KEGG: pay:PAU_03002 hypothetical protein; hypothetical protein 4766482..4767018 Pectobacterium wasabiae WPP163 8532792 YP_003261649.1 CDS Pecwa_4350 NC_013421.1 4767365 4770004 D catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 4767365..4770004 Pectobacterium wasabiae WPP163 8532793 YP_003261650.1 CDS Pecwa_4351 NC_013421.1 4770077 4770859 R KEGG: eca:ECA0186 hypothetical protein; protein tyrosine/serine phosphatase complement(4770077..4770859) Pectobacterium wasabiae WPP163 8532794 YP_003261651.1 CDS Pecwa_4352 NC_013421.1 4771008 4771778 R catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase complement(4771008..4771778) Pectobacterium wasabiae WPP163 8532795 YP_003261652.1 CDS Pecwa_4353 NC_013421.1 4772104 4772931 D PFAM: dienelactone hydrolase; KEGG: eca:ECA0184 carboxymethylenebutenolidase; carboxymethylenebutenolidase 4772104..4772931 Pectobacterium wasabiae WPP163 8532796 YP_003261653.1 CDS Pecwa_4354 NC_013421.1 4773026 4774693 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0183 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4773026..4774693) Pectobacterium wasabiae WPP163 8532797 YP_003261654.1 CDS Pecwa_4355 NC_013421.1 4775597 4777219 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pct:PC1_4072 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4775597..4777219) Pectobacterium wasabiae WPP163 8532798 YP_003261655.1 CDS Pecwa_4356 NC_013421.1 4777762 4780026 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(4777762..4780026) Pectobacterium wasabiae WPP163 8532799 YP_003261656.1 CDS Pecwa_4357 NC_013421.1 4780131 4781066 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0180 transcriptional activator protein; LysR family transcriptional regulator 4780131..4781066 Pectobacterium wasabiae WPP163 8532800 YP_003261657.1 CDS Pecwa_4358 NC_013421.1 4780972 4781871 R TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA0179 hypothetical protein; carboxylate/amino acid/amine transporter complement(4780972..4781871) Pectobacterium wasabiae WPP163 8532801 YP_003261658.1 CDS Pecwa_4359 NC_013421.1 4782166 4782624 D hypothetical protein 4782166..4782624 Pectobacterium wasabiae WPP163 8532802 YP_003261659.1 CDS pagP NC_013421.1 4782857 4783486 R catalyzes the transfer of palmitate to lipid A; palmitoyl transferase complement(4782857..4783486) Pectobacterium wasabiae WPP163 8532803 YP_003261660.1 CDS cysE NC_013421.1 4783894 4784715 R catalyzes the O-acetylation of serine; serine acetyltransferase complement(4783894..4784715) Pectobacterium wasabiae WPP163 8532804 YP_003261661.1 CDS gpsA NC_013421.1 4784994 4786013 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(4784994..4786013) Pectobacterium wasabiae WPP163 8532805 YP_003261662.1 CDS Pecwa_4363 NC_013421.1 4786013 4786489 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(4786013..4786489) Pectobacterium wasabiae WPP163 8532806 YP_003261663.1 CDS Pecwa_4364 NC_013421.1 4786694 4787125 R PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: pct:PC1_4083 rhodanese domain protein; rhodanese complement(4786694..4787125) Pectobacterium wasabiae WPP163 8532807 YP_003261664.1 CDS Pecwa_4365 NC_013421.1 4787370 4788671 D PFAM: peptidase M23; KEGG: pct:PC1_4084 peptidase M23; hypothetical protein 4787370..4788671 Pectobacterium wasabiae WPP163 8532808 YP_003261665.1 CDS Pecwa_4366 NC_013421.1 4788674 4789615 D PFAM: protein of unknown function DUF610 YibQ; KEGG: pct:PC1_4085 hypothetical protein; hypothetical protein 4788674..4789615 Pectobacterium wasabiae WPP163 8532809 YP_003261666.1 CDS tdh NC_013421.1 4789654 4790685 R converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase complement(4789654..4790685) Pectobacterium wasabiae WPP163 8532810 YP_003261667.1 CDS Pecwa_4368 NC_013421.1 4790696 4791892 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(4790696..4791892) Pectobacterium wasabiae WPP163 8532811 YP_003261668.1 CDS rfaD NC_013421.1 4792134 4793066 D catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-manno-heptose-6-epimerase 4792134..4793066 Pectobacterium wasabiae WPP163 8532812 YP_003261669.1 CDS Pecwa_4370 NC_013421.1 4793090 4794157 D catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose--LPS heptosyltransferase 4793090..4794157 Pectobacterium wasabiae WPP163 8532813 YP_003261670.1 CDS Pecwa_4371 NC_013421.1 4794154 4795137 D TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: eca:ECA0163 ADP-heptose:LPS heptosyl transferase I; ADP-heptose--LPS heptosyltransferase 4794154..4795137 Pectobacterium wasabiae WPP163 8532814 YP_003261671.1 CDS Pecwa_4372 NC_013421.1 4795134 4796417 D PFAM: O-antigen polymerase; KEGG: eca:ECA0162 O-antigen ligase; O-antigen polymerase 4795134..4796417 Pectobacterium wasabiae WPP163 8532815 YP_003261672.1 CDS Pecwa_4373 NC_013421.1 4796728 4796859 D hypothetical protein 4796728..4796859 Pectobacterium wasabiae WPP163 8532816 YP_003261673.1 CDS Pecwa_4374 NC_013421.1 4797182 4798414 D PFAM: O-antigen polymerase; KEGG: eca:ECA0161 O-antigen ligase; O-antigen polymerase 4797182..4798414 Pectobacterium wasabiae WPP163 8532817 YP_003261674.1 CDS Pecwa_4375 NC_013421.1 4798411 4799481 D TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9; KEGG: eca:ECA0160 lipopolysaccharide core biosynthesis protein; lipopolysaccharide core biosynthesis protein 4798411..4799481 Pectobacterium wasabiae WPP163 8532818 YP_003261675.1 CDS Pecwa_4376 NC_013421.1 4799478 4800593 D PFAM: glycosyl transferase group 1; KEGG: eca:ECA0159 lipopolysaccharide core biosynthesis protein; group 1 glycosyl transferase 4799478..4800593 Pectobacterium wasabiae WPP163 8532819 YP_003261676.1 CDS Pecwa_4377 NC_013421.1 4800671 4801681 D PFAM: glycosyl transferase family 8; glycosyl transferase family 8 domain protein; KEGG: eca:ECA0158 lipopolysaccharide 1,3-galactosyltransferase; lipopolysaccharide 3-alpha-galactosyltransferase 4800671..4801681 Pectobacterium wasabiae WPP163 8532820 YP_003261677.1 CDS Pecwa_4378 NC_013421.1 4801733 4802743 D PFAM: glycosyl transferase family 8; glycosyl transferase family 8 domain protein; KEGG: eca:ECA0157 lipopolysaccharide 1,2-glucosyltransferase; lipopolysaccharide glucosyltransferase I 4801733..4802743 Pectobacterium wasabiae WPP163 8532821 YP_003261678.1 CDS Pecwa_4379 NC_013421.1 4802901 4803689 D KEGG: eca:ECA0156 hypothetical protein; hypothetical protein 4802901..4803689 Pectobacterium wasabiae WPP163 8532822 YP_003261679.1 CDS Pecwa_4380 NC_013421.1 4804607 4804699 D hypothetical protein 4804607..4804699 Pectobacterium wasabiae WPP163 8532823 YP_003261680.1 CDS Pecwa_4381 NC_013421.1 4804845 4805594 R PFAM: glycosyl transferase family 25; KEGG: eca:ECA0154 beta1,4-galactosyltransferase; glycosyl transferase family protein complement(4804845..4805594) Pectobacterium wasabiae WPP163 8532824 YP_003261681.1 CDS Pecwa_4382 NC_013421.1 4805677 4806453 D PFAM: glycosyl transferase family 2; KEGG: eca:ECA0153 lipopolysaccharide core biosynthesis glycosyl transferase; family 2 glycosyl transferase 4805677..4806453 Pectobacterium wasabiae WPP163 8532825 YP_003261682.1 CDS Pecwa_4383 NC_013421.1 4806519 4807379 D PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: eca:ECA0152 glycosyltransferase; glycosyltransferase family protein 4806519..4807379 Pectobacterium wasabiae WPP163 8532826 YP_003261683.1 CDS Pecwa_4384 NC_013421.1 4807609 4808886 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 4807609..4808886 Pectobacterium wasabiae WPP163 8532827 YP_003261684.1 CDS coaD NC_013421.1 4808923 4809414 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 4808923..4809414 Pectobacterium wasabiae WPP163 8532828 YP_003261685.1 CDS Pecwa_4386 NC_013421.1 4809418 4810491 R PFAM: glycosyl transferase group 1; KEGG: cvi:CV_0824 lipopolysaccharide biosynthesis protein; group 1 glycosyl transferase complement(4809418..4810491) Pectobacterium wasabiae WPP163 8532829 YP_003261686.1 CDS Pecwa_4387 NC_013421.1 4810539 4811348 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(4810539..4811348) Pectobacterium wasabiae WPP163 8532830 YP_003261687.1 CDS rpmG NC_013421.1 4811566 4811733 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(4811566..4811733) Pectobacterium wasabiae WPP163 8532831 YP_003261688.1 CDS rpmB NC_013421.1 4811745 4811981 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(4811745..4811981) Pectobacterium wasabiae WPP163 8532832 YP_003261689.1 CDS radC NC_013421.1 4812219 4812884 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(4812219..4812884) Pectobacterium wasabiae WPP163 8532833 YP_003261690.1 CDS Pecwa_4391 NC_013421.1 4813071 4814315 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 4813071..4814315 Pectobacterium wasabiae WPP163 8532834 YP_003261691.1 CDS dut NC_013421.1 4814293 4814751 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 4814293..4814751 Pectobacterium wasabiae WPP163 8532835 YP_003261692.1 CDS slmA NC_013421.1 4814870 4815466 D FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 4814870..4815466 Pectobacterium wasabiae WPP163 8532836 YP_003261693.1 CDS pyrE NC_013421.1 4815558 4816199 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(4815558..4816199) Pectobacterium wasabiae WPP163 8532837 YP_003261694.1 CDS rph NC_013421.1 4816385 4817101 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(4816385..4817101) Pectobacterium wasabiae WPP163 8532838 YP_003261695.1 CDS Pecwa_4396 NC_013421.1 4817344 4818312 D PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0139 mandelate racemase / muconate lactonizing enzyme family protein; mandelate racemase/muconate lactonizing protein 4817344..4818312 Pectobacterium wasabiae WPP163 8532839 YP_003261696.1 CDS Pecwa_4397 NC_013421.1 4818357 4820228 D PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_4108 ABC transporter related; ABC transporter 4818357..4820228 Pectobacterium wasabiae WPP163 8532840 YP_003261697.1 CDS Pecwa_4398 NC_013421.1 4820300 4821841 D PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_4109 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 4820300..4821841 Pectobacterium wasabiae WPP163 8532841 YP_003261698.1 CDS Pecwa_4399 NC_013421.1 4821860 4822780 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_4110 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 4821860..4822780 Pectobacterium wasabiae WPP163 8532842 YP_003261699.1 CDS Pecwa_4400 NC_013421.1 4822789 4823688 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_4111 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 4822789..4823688 Pectobacterium wasabiae WPP163 8532843 YP_003261700.1 CDS Pecwa_4401 NC_013421.1 4823697 4824779 D PFAM: peptidase S58 DmpA; KEGG: eca:ECA0134 peptidase; peptidase S58 DmpA 4823697..4824779 Pectobacterium wasabiae WPP163 8532844 YP_003261701.1 CDS Pecwa_4402 NC_013421.1 4824782 4825603 D PFAM: peptidase M55 D-aminopeptidase; KEGG: eca:ECA0133 hypothetical protein; peptidase M55 D-aminopeptidase 4824782..4825603 Pectobacterium wasabiae WPP163 8532845 YP_003261702.1 CDS Pecwa_4403 NC_013421.1 4825653 4826600 D PFAM: peptidase T2 asparaginase 2; KEGG: eca:ECA0132 L-asparaginase; peptidase T2 asparaginase 2 4825653..4826600 Pectobacterium wasabiae WPP163 8532846 YP_003261703.1 CDS Pecwa_4404 NC_013421.1 4827073 4827981 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0131 LysR family transcriptional regulator; LysR family transcriptional regulator 4827073..4827981 Pectobacterium wasabiae WPP163 8532847 YP_003261704.1 CDS Pecwa_4405 NC_013421.1 4828080 4828943 D PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: eca:ECA0130 hypothetical protein; hypothetical protein 4828080..4828943 Pectobacterium wasabiae WPP163 8532848 YP_003261705.1 CDS Pecwa_4406 NC_013421.1 4829078 4829404 D PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: pct:PC1_4123 transcriptional regulator, XRE family; XRE family transcriptional regulator 4829078..4829404 Pectobacterium wasabiae WPP163 8532849 YP_003261706.1 CDS Pecwa_4407 NC_013421.1 4829667 4829840 D KEGG: eca:ECA0125 hypothetical protein; hypothetical protein 4829667..4829840 Pectobacterium wasabiae WPP163 8532850 YP_003261707.1 CDS Pecwa_4408 NC_013421.1 4829987 4830544 D KEGG: pct:PC1_4127 lipoprotein; lipoprotein 4829987..4830544 Pectobacterium wasabiae WPP163 8532851 YP_003261708.1 CDS Pecwa_4409 NC_013421.1 4830592 4831143 R KEGG: pct:PC1_4128 lipoprotein; lipoprotein complement(4830592..4831143) Pectobacterium wasabiae WPP163 8532852 YP_003261709.1 CDS Pecwa_4410 NC_013421.1 4831206 4831637 D KEGG: pct:PC1_4129 hypothetical protein; hypothetical protein 4831206..4831637 Pectobacterium wasabiae WPP163 8532853 YP_003261710.1 CDS Pecwa_4411 NC_013421.1 4831792 4832961 R PFAM: protein of unknown function UPF0118; KEGG: eca:ECA0120 hypothetical protein; hypothetical protein complement(4831792..4832961) Pectobacterium wasabiae WPP163 8532854 YP_003261711.1 CDS Pecwa_4412 NC_013421.1 4833055 4833555 R PFAM: protein of unknown function UPF0157; KEGG: pct:PC1_4131 hypothetical protein; hypothetical protein complement(4833055..4833555) Pectobacterium wasabiae WPP163 8532855 YP_003261712.1 CDS lldD NC_013421.1 4833668 4834828 R flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase complement(4833668..4834828) Pectobacterium wasabiae WPP163 8532856 YP_003261713.1 CDS Pecwa_4414 NC_013421.1 4835013 4836452 R NAD-linked; aldehyde dehydrogenase A complement(4835013..4836452) Pectobacterium wasabiae WPP163 8532857 YP_003261714.1 CDS Pecwa_4415 NC_013421.1 4836722 4837645 R KEGG: eca:ECA0117 hypothetical protein; hypothetical protein complement(4836722..4837645) Pectobacterium wasabiae WPP163 8532858 YP_003261715.1 CDS Pecwa_4416 NC_013421.1 4837712 4838803 R PFAM: fatty acid desaturase; KEGG: pct:PC1_4135 fatty acid desaturase; fatty acid desaturase complement(4837712..4838803) Pectobacterium wasabiae WPP163 8532859 YP_003261716.1 CDS Pecwa_4417 NC_013421.1 4838803 4839942 R PFAM: fatty acid desaturase; KEGG: eca:ECA0115 fatty acid desaturase; fatty acid desaturase complement(4838803..4839942) Pectobacterium wasabiae WPP163 8532860 YP_003261717.1 CDS Pecwa_4418 NC_013421.1 4839935 4841059 R PFAM: fatty acid hydroxylase; KEGG: eca:ECA0114 hypothetical protein; fatty acid hydroxylase complement(4839935..4841059) Pectobacterium wasabiae WPP163 8532861 YP_003261718.1 CDS Pecwa_4419 NC_013421.1 4841064 4841717 R PFAM: phosphoesterase PA-phosphatase related; KEGG: eca:ECA0113 hypothetical protein; phosphoesterase PA-phosphatase-like protein complement(4841064..4841717) Pectobacterium wasabiae WPP163 8532862 YP_003261719.1 CDS Pecwa_4420 NC_013421.1 4841717 4843003 R TIGRFAM: adenylate-forming enzyme; KEGG: eca:ECA0112 hypothetical protein; adenylate-forming enzyme complement(4841717..4843003) Pectobacterium wasabiae WPP163 8532863 YP_003261720.1 CDS Pecwa_4421 NC_013421.1 4843000 4843806 R PFAM: beta-lactamase; KEGG: pct:PC1_4140 beta-lactamase; beta-lactamase complement(4843000..4843806) Pectobacterium wasabiae WPP163 8532864 YP_003261721.1 CDS Pecwa_4422 NC_013421.1 4843799 4844827 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: eca:ECA0110 hypothetical protein; NAD-dependent epimerase/dehydratase complement(4843799..4844827) Pectobacterium wasabiae WPP163 8532865 YP_003261722.1 CDS Pecwa_4423 NC_013421.1 4844824 4845837 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: eca:ECA0109 hypothetical protein; beta-ketoacyl-acyl-carrier-protein synthase III complement(4844824..4845837) Pectobacterium wasabiae WPP163 8532866 YP_003261723.1 CDS Pecwa_4424 NC_013421.1 4846039 4846380 D PFAM: GlpM family protein; KEGG: eca:ECA0108 hypothetical protein; GlpM family protein 4846039..4846380 Pectobacterium wasabiae WPP163 8532867 YP_003261724.1 CDS Pecwa_4425 NC_013421.1 4846425 4846814 R SMART: rhodanese; KEGG: ecf:ECH74115_2149 rhodanese domain protein; rhodanese complement(4846425..4846814) Pectobacterium wasabiae WPP163 8532868 YP_003261725.1 CDS ftrA NC_013421.1 4846934 4847929 D upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; transcriptional activator FtrA 4846934..4847929 Pectobacterium wasabiae WPP163 8532869 YP_003261726.1 CDS Pecwa_4427 NC_013421.1 4847934 4849136 D outer membrane lipoprotein that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; YbhC localizes to the cellular poles; member of pectinesterase family; pectinesterase 4847934..4849136 Pectobacterium wasabiae WPP163 8532870 YP_003261727.1 CDS Pecwa_4428 NC_013421.1 4849527 4850264 D PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: dze:Dd1591_0100 LuxR family transcriptional regulator; LuxR family transcriptional regulator 4849527..4850264 Pectobacterium wasabiae WPP163 8532871 YP_003261728.1 CDS Pecwa_4429 NC_013421.1 4850242 4850895 R PFAM: autoinducer synthesis protein; KEGG: eca:ECA0105 N-acylhomoserine lactone synthesis protein; acyl-homoserine-lactone synthase complement(4850242..4850895) Pectobacterium wasabiae WPP163 8532872 YP_003261729.1 CDS Pecwa_4430 NC_013421.1 4851164 4852510 R catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase complement(4851164..4852510) Pectobacterium wasabiae WPP163 8532873 YP_003261730.1 CDS Pecwa_4431 NC_013421.1 4853047 4853622 D PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA0102 hypothetical protein; ThiJ/PfpI domain-containing protein 4853047..4853622 Pectobacterium wasabiae WPP163 8532874 YP_003261731.1 CDS Pecwa_4432 NC_013421.1 4853693 4854871 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: eca:ECA0101 xylose operon regulatory protein; AraC family transcriptional regulator complement(4853693..4854871) Pectobacterium wasabiae WPP163 8532875 YP_003261732.1 CDS Pecwa_4433 NC_013421.1 4854887 4855003 R hypothetical protein complement(4854887..4855003) Pectobacterium wasabiae WPP163 8532876 YP_003261733.1 CDS Pecwa_4434 NC_013421.1 4855008 4856189 R PFAM: inner-membrane translocator; KEGG: eca:ECA0100 xylose transporter permease; inner-membrane translocator complement(4855008..4856189) Pectobacterium wasabiae WPP163 8532877 YP_003261734.1 CDS Pecwa_4435 NC_013421.1 4856167 4857708 R with XylFH is part of the high affinity xylose ABC transporter; sugar ABC transporter ATP-binding protein complement(4856167..4857708) Pectobacterium wasabiae WPP163 8532878 YP_003261735.1 CDS xylF NC_013421.1 4857829 4858827 R periplasmic substrate-binding component of the ATP-dependent xylose transporter; high affinity; D-xylose transporter subunit XylF complement(4857829..4858827) Pectobacterium wasabiae WPP163 8532879 YP_003261736.1 CDS Pecwa_4437 NC_013421.1 4859177 4860499 D catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 4859177..4860499 Pectobacterium wasabiae WPP163 8532880 YP_003261737.1 CDS Pecwa_4438 NC_013421.1 4860830 4862287 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY-like; KEGG: eca:ECA0096 xylulose kinase; xylulokinase 4860830..4862287 Pectobacterium wasabiae WPP163 8532881 YP_003261738.1 CDS Pecwa_4439 NC_013421.1 4862318 4863310 R PFAM: acyltransferase 3; KEGG: eca:ECA0095 hypothetical protein; acyltransferase 3 complement(4862318..4863310) Pectobacterium wasabiae WPP163 8532882 YP_003261739.1 CDS Pecwa_4440 NC_013421.1 4863518 4865053 R PFAM: aldehyde dehydrogenase; KEGG: eca:ECA0094 aldehyde dehydrogenase B; aldehyde dehydrogenase complement(4863518..4865053) Pectobacterium wasabiae WPP163 8532883 YP_003261740.1 CDS Pecwa_4441 NC_013421.1 4865466 4866299 D involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 4865466..4866299 Pectobacterium wasabiae WPP163 8532884 YP_003261741.1 CDS Pecwa_4442 NC_013421.1 4866558 4867184 D SodA; manganese binding; only present under aerobic conditions; destroys free radicals; superoxide dismutase 4866558..4867184 Pectobacterium wasabiae WPP163 8532885 YP_003261742.1 CDS Pecwa_4443 NC_013421.1 4867570 4869462 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: eca:ECA0091 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4867570..4869462 Pectobacterium wasabiae WPP163 8532886 YP_003261743.1 CDS Pecwa_4444 NC_013421.1 4869580 4869942 R KEGG: eca:ECA0090 hypothetical protein; hypothetical protein complement(4869580..4869942) Pectobacterium wasabiae WPP163 8532887 YP_003261744.1 CDS mtlR NC_013421.1 4870104 4870667 R Acts as a repressor of the mtlAD operon; mannitol repressor protein complement(4870104..4870667) Pectobacterium wasabiae WPP163 8532888 YP_003261745.1 CDS Pecwa_4446 NC_013421.1 4870785 4871933 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: pct:PC1_4164 mannitol dehydrogenase domain protein; mannitol-1-phosphate 5-dehydrogenase complement(4870785..4871933) Pectobacterium wasabiae WPP163 8532889 YP_003261746.1 CDS Pecwa_4447 NC_013421.1 4871995 4873902 R TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: pct:PC1_4165 PTS system, mannitol-specific IIC subunit; PTS system mannitol-specific transporter subunit IIC complement(4871995..4873902) Pectobacterium wasabiae WPP163 8532890 YP_003261747.1 CDS Pecwa_4448 NC_013421.1 4874329 4875045 R KEGG: eca:ECA0086 hypothetical protein; hypothetical protein complement(4874329..4875045) Pectobacterium wasabiae WPP163 8532891 YP_003261748.1 CDS glyS NC_013421.1 4875359 4877428 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(4875359..4877428) Pectobacterium wasabiae WPP163 8532892 YP_003261749.1 CDS glyQ NC_013421.1 4877438 4878367 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(4877438..4878367) Pectobacterium wasabiae WPP163 8532893 YP_003261750.1 CDS Pecwa_4451 NC_013421.1 4878494 4879300 R PFAM: protein of unknown function DUF81; KEGG: pct:PC1_4169 hypothetical protein; hypothetical protein complement(4878494..4879300) Pectobacterium wasabiae WPP163 8532894 YP_003261751.1 CDS Pecwa_4452 NC_013421.1 4879560 4880123 D KEGG: eca:ECA0082 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 4879560..4880123 Pectobacterium wasabiae WPP163 8532895 YP_003261752.1 CDS Pecwa_4453 NC_013421.1 4880120 4880611 D PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_4171 GCN5-related N-acetyltransferase; hypothetical protein 4880120..4880611 Pectobacterium wasabiae WPP163 8532896 YP_003261753.1 CDS Pecwa_4454 NC_013421.1 4880619 4882580 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pct:PC1_4172 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4880619..4882580) Pectobacterium wasabiae WPP163 8532897 YP_003261754.1 CDS Pecwa_4455 NC_013421.1 4882944 4883906 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: pct:PC1_4173 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; gluconate 2-dehydrogenase 4882944..4883906 Pectobacterium wasabiae WPP163 8532898 YP_003261755.1 CDS Pecwa_4456 NC_013421.1 4884213 4885850 D PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_4174 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 4884213..4885850 Pectobacterium wasabiae WPP163 8532899 YP_003261756.1 CDS Pecwa_4457 NC_013421.1 4885877 4886821 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_4175 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 4885877..4886821 Pectobacterium wasabiae WPP163 8532900 YP_003261757.1 CDS Pecwa_4458 NC_013421.1 4886818 4887678 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pct:PC1_4176 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 4886818..4887678 Pectobacterium wasabiae WPP163 8532901 YP_003261758.1 CDS Pecwa_4459 NC_013421.1 4887675 4889372 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA0072 ABC transporter ATP-binding protein; ABC transporter 4887675..4889372 Pectobacterium wasabiae WPP163 8532902 YP_003261759.1 CDS Pecwa_4460 NC_013421.1 4889374 4890408 D PFAM: Luciferase-like, subgroup; KEGG: eca:ECA0071 monooxygenase; luciferase-like protein 4889374..4890408 Pectobacterium wasabiae WPP163 8532903 YP_003261760.1 CDS Pecwa_4461 NC_013421.1 4890405 4891538 D TIGRFAM: peroxidase; alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: eca:ECA0070 hypothetical protein; peroxidase 4890405..4891538 Pectobacterium wasabiae WPP163 8532904 YP_003261761.1 CDS Pecwa_4462 NC_013421.1 4891944 4892381 D PFAM: ricin B lectin; KEGG: ret:RHE_PA00136 hypothetical protein; ricin B lectin 4891944..4892381 Pectobacterium wasabiae WPP163 8532905 YP_003261762.1 CDS Pecwa_4463 NC_013421.1 4892632 4893141 R PFAM: Phenolic acid decarboxylase; KEGG: eca:ECA0069 phenolic acid decarboxylase; Phenolic acid decarboxylase complement(4892632..4893141) Pectobacterium wasabiae WPP163 8532906 YP_003261763.1 CDS Pecwa_4464 NC_013421.1 4893244 4894116 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eca:ECA0068 LysR family transcriptional regulator; LysR family transcriptional regulator 4893244..4894116 Pectobacterium wasabiae WPP163 8532907 YP_003261764.1 CDS Pecwa_4465 NC_013421.1 4894160 4894783 R PFAM: lysine exporter (LYSE/YGGA); KEGG: eca:ECA0067 amino acid transporter LysE; lysine exporter protein LysE/YggA complement(4894160..4894783) Pectobacterium wasabiae WPP163 8532908 YP_003261765.1 CDS Pecwa_4466 NC_013421.1 4894829 4895368 R PFAM: protein of unknown function UPF0167; KEGG: pap:PSPA7_3797 hypothetical protein; hypothetical protein complement(4894829..4895368) Pectobacterium wasabiae WPP163 8532909 YP_003261766.1 CDS Pecwa_4467 NC_013421.1 4895483 4896388 R PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: pct:PC1_4183 FAD-binding 9 siderophore-interacting domain protein; FAD-binding 9 siderophore-interacting domain-containing protein complement(4895483..4896388) Pectobacterium wasabiae WPP163 8532910 YP_003261767.1 CDS Pecwa_4468 NC_013421.1 4896879 4897481 D KEGG: bbt:BBta_4640 hypothetical protein; hypothetical protein 4896879..4897481 Pectobacterium wasabiae WPP163 8532911 YP_003261768.1 CDS Pecwa_4469 NC_013421.1 4897550 4897909 D hypothetical protein 4897550..4897909 Pectobacterium wasabiae WPP163 8532912 YP_003261769.1 CDS Pecwa_4470 NC_013421.1 4897979 4898368 R KEGG: vfi:VF_A0980 hypothetical protein; hypothetical protein complement(4897979..4898368) Pectobacterium wasabiae WPP163 8532913 YP_003261770.1 CDS Pecwa_4471 NC_013421.1 4898799 4900151 R catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase complement(4898799..4900151) Pectobacterium wasabiae WPP163 8532914 YP_003261771.1 CDS Pecwa_4472 NC_013421.1 4900281 4901123 R PFAM: protein of unknown function DUF519; KEGG: eca:ECA0061 hypothetical protein; hypothetical protein complement(4900281..4901123) Pectobacterium wasabiae WPP163 8532915 YP_003261772.1 CDS Pecwa_4473 NC_013421.1 4901492 4902196 D PFAM: protein of unknown function DUF1266; KEGG: pct:PC1_4188 hypothetical protein; hypothetical protein 4901492..4902196 Pectobacterium wasabiae WPP163 8532916 YP_003261773.1 CDS Pecwa_4474 NC_013421.1 4902196 4904925 D PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: pct:PC1_4189 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 4902196..4904925 Pectobacterium wasabiae WPP163 8532917 YP_003261774.1 CDS Pecwa_4475 NC_013421.1 4904974 4906665 R PFAM: heat shock protein 70; KEGG: pct:PC1_4190 heat shock protein 70; heat shock protein 70 complement(4904974..4906665) Pectobacterium wasabiae WPP163 8532918 YP_003261775.1 CDS Pecwa_4476 NC_013421.1 4906886 4907179 D KEGG: eca:ECA0060 hypothetical protein; hypothetical protein 4906886..4907179 Pectobacterium wasabiae WPP163 8532919 YP_003261776.1 CDS Pecwa_4477 NC_013421.1 4907371 4907751 D hypothetical protein 4907371..4907751 Pectobacterium wasabiae WPP163 8532920 YP_003261777.1 CDS Pecwa_4478 NC_013421.1 4907767 4908156 D hypothetical protein 4907767..4908156 Pectobacterium wasabiae WPP163 8532921 YP_003261778.1 CDS Pecwa_4479 NC_013421.1 4908411 4910453 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: pct:PC1_4196 oligopeptidase A; oligopeptidase A 4908411..4910453 Pectobacterium wasabiae WPP163 8532922 YP_003261779.1 CDS Pecwa_4480 NC_013421.1 4910450 4911196 D predicted SAM-dependent methyltransferase; methyltransferase 4910450..4911196 Pectobacterium wasabiae WPP163 8532923 YP_003261780.1 CDS Pecwa_4481 NC_013421.1 4911355 4913250 D PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: eca:ECA0053 phosphodiesterase; 5'-nucleotidase domain protein 4911355..4913250 Pectobacterium wasabiae WPP163 8532924 YP_003261781.1 CDS Pecwa_4482 NC_013421.1 4913348 4914661 R PFAM: FAD dependent oxidoreductase; KEGG: eca:ECA0052 hypothetical protein; FAD dependent oxidoreductase complement(4913348..4914661) Pectobacterium wasabiae WPP163 8532925 YP_003261782.1 CDS Pecwa_4483 NC_013421.1 4914849 4916192 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(4914849..4916192) Pectobacterium wasabiae WPP163 8532926 YP_003261783.1 CDS Pecwa_4484 NC_013421.1 4916485 4916922 R PFAM: UspA domain protein; KEGG: pct:PC1_4201 UspA domain protein; UspA domain-containing protein complement(4916485..4916922) Pectobacterium wasabiae WPP163 8532927 YP_003261784.1 CDS Pecwa_4485 NC_013421.1 4917478 4917813 D ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspB 4917478..4917813 Pectobacterium wasabiae WPP163 8532928 YP_003261785.1 CDS Pecwa_4486 NC_013421.1 4917905 4919410 R PFAM: phosphate transporter; KEGG: pct:PC1_4203 phosphate transporter; phosphate transporter complement(4917905..4919410) Pectobacterium wasabiae WPP163 8532929 YP_003261786.1 CDS Pecwa_4487 NC_013421.1 4919679 4920878 D PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: pct:PC1_4204 HI0933 family protein; hypothetical protein 4919679..4920878 Pectobacterium wasabiae WPP163 8532930 YP_003261787.1 CDS Pecwa_4488 NC_013421.1 4920971 4922575 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: pct:PC1_4205 EAL domain protein; EAL domain-containing protein 4920971..4922575 Pectobacterium wasabiae WPP163 8532931 YP_003261788.1 CDS Pecwa_4489 NC_013421.1 4922619 4923167 R PFAM: virulence-related outer membrane protein; KEGG: eca:ECA0045 virulence-associated outer membrane protein; virulence-related outer membrane protein complement(4922619..4923167) Pectobacterium wasabiae WPP163 8532932 YP_003261789.1 CDS Pecwa_4490 NC_013421.1 4923742 4925421 R catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase complement(4923742..4925421) Pectobacterium wasabiae WPP163 8532934 YP_003261790.1 CDS ligB NC_013421.1 4925676 4927367 R this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB complement(4925676..4927367) Pectobacterium wasabiae WPP163 8532935 YP_003261791.1 CDS gmk NC_013421.1 4927691 4928314 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 4927691..4928314 Pectobacterium wasabiae WPP163 8532936 YP_003261792.1 CDS rpoZ NC_013421.1 4928368 4928643 D promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and subunit alphas; DNA-directed RNA polymerase subunit omega 4928368..4928643 Pectobacterium wasabiae WPP163 8532937 YP_003261793.1 CDS Pecwa_4494 NC_013421.1 4928662 4930761 D KEGG: pct:PC1_4211 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 4928662..4930761 Pectobacterium wasabiae WPP163 8532938 YP_003261794.1 CDS Pecwa_4495 NC_013421.1 4930767 4931459 D specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 4930767..4931459 Pectobacterium wasabiae WPP163 8532939 YP_003261795.1 CDS Pecwa_4496 NC_013421.1 4931459 4933540 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 4931459..4933540 Pectobacterium wasabiae WPP163 8532940 YP_003261796.1 CDS Pecwa_4497 NC_013421.1 4933707 4935095 D TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: eca:ECA0035 purine permease; uracil-xanthine permease 4933707..4935095 Pectobacterium wasabiae WPP163 8532941 YP_003261797.1 CDS Pecwa_4498 NC_013421.1 4935253 4936944 D PFAM: AsmA family protein; KEGG: pct:PC1_4215 AsmA family protein; AsmA family protein 4935253..4936944 Pectobacterium wasabiae WPP163 8532942 YP_003261798.1 CDS Pecwa_4499 NC_013421.1 4937099 4938040 R TIGRFAM: thioesterase domain protein; PFAM: thioesterase ; GCN5-related N-acetyltransferase; KEGG: eca:ECA0033 GNAT family acetyltransferase; thioesterase domain-containing protein complement(4937099..4938040) Pectobacterium wasabiae WPP163 8532943 YP_003261799.1 CDS Pecwa_4500 NC_013421.1 4938125 4938562 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(4938125..4938562) Pectobacterium wasabiae WPP163 8532944 YP_003261800.1 CDS Pecwa_4501 NC_013421.1 4938627 4939238 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: eca:ECA0031 phosphatase; phosphatase complement(4938627..4939238) Pectobacterium wasabiae WPP163 8532945 YP_003261801.1 CDS Pecwa_4502 NC_013421.1 4939400 4941223 R TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: eca:ECA0030 GTP-binding regulatory protein; GTP-binding protein TypA complement(4939400..4941223) Pectobacterium wasabiae WPP163 8532946 YP_003261802.1 CDS glnA NC_013421.1 4941593 4943002 D forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 4941593..4943002 Pectobacterium wasabiae WPP163 8532947 YP_003261803.1 CDS glnL NC_013421.1 4943345 4944394 D sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) 4943345..4944394 Pectobacterium wasabiae WPP163 8532948 YP_003261804.1 CDS glnG NC_013421.1 4944403 4945815 D response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) 4944403..4945815 Pectobacterium wasabiae WPP163 8532949 YP_003261805.1 CDS Pecwa_4506 NC_013421.1 4945959 4946096 D KEGG: pct:PC1_4223 hypothetical protein; hypothetical protein 4945959..4946096 Pectobacterium wasabiae WPP163 8532950 YP_003261806.1 CDS Pecwa_4507 NC_013421.1 4946308 4946940 R KEGG: avn:Avin_09722 DsbA oxidoreductase; hypothetical protein complement(4946308..4946940) Pectobacterium wasabiae WPP163 8532951 YP_003261807.1 CDS Pecwa_4508 NC_013421.1 4946933 4947616 R hypothetical protein complement(4946933..4947616) Pectobacterium wasabiae WPP163 8532952 YP_003261808.1 CDS Pecwa_4509 NC_013421.1 4947647 4947940 R TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: FED_A; FED A (FERREDOXIN 2); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding ; K02639 ferredoxin; ferredoxin 2Fe-2S complement(4947647..4947940) Pectobacterium wasabiae WPP163 8532953 YP_003261809.1 CDS Pecwa_4510 NC_013421.1 4947937 4948188 R KEGG: dze:Dd1591_1323 hypothetical protein; hypothetical protein complement(4947937..4948188) Pectobacterium wasabiae WPP163 8532954 YP_003261810.1 CDS Pecwa_4511 NC_013421.1 4948218 4948523 R hypothetical protein complement(4948218..4948523) Pectobacterium wasabiae WPP163 8532955 YP_003261811.1 CDS Pecwa_4514 NC_013421.1 4949237 4950610 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(4949237..4950610) Pectobacterium wasabiae WPP163 8532958 YP_003261812.1 CDS Pecwa_4515 NC_013421.1 4950924 4951481 R PFAM: protein of unknown function DUF414; KEGG: eca:ECA0024 hypothetical protein; hypothetical protein complement(4950924..4951481) Pectobacterium wasabiae WPP163 8532959 YP_003261813.1 CDS engB NC_013421.1 4951685 4952320 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 4951685..4952320 Pectobacterium wasabiae WPP163 8532960 YP_003261814.1 CDS Pecwa_4517 NC_013421.1 4952735 4955524 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(4952735..4955524) Pectobacterium wasabiae WPP163 8532961 YP_003261815.1 CDS Pecwa_4518 NC_013421.1 4955901 4956524 R PFAM: DSBA oxidoreductase; KEGG: eca:ECA0020 periplasmic protein disulfide isomerase I; protein disulfide isomerase I complement(4955901..4956524) Pectobacterium wasabiae WPP163 8532962 YP_003261816.1 CDS Pecwa_4519 NC_013421.1 4956549 4957535 R catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase complement(4956549..4957535) Pectobacterium wasabiae WPP163 8532963 YP_003261817.1 CDS Pecwa_4520 NC_013421.1 4957614 4957883 R PFAM: protein of unknown function DUF1040; KEGG: pct:PC1_4230 hypothetical protein; hypothetical protein complement(4957614..4957883) Pectobacterium wasabiae WPP163 8532964 YP_003261818.1 CDS mobA NC_013421.1 4958085 4958675 D in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4958085..4958675 Pectobacterium wasabiae WPP163 8532965 YP_003261819.1 CDS Pecwa_4522 NC_013421.1 4958665 4959186 D in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; molybdopterin-guanine dinucleotide biosynthesis protein B 4958665..4959186 Pectobacterium wasabiae WPP163 8532966 YP_003261820.1 CDS Pecwa_4523 NC_013421.1 4964919 4965914 R DNA-binding transcriptional repressor of ribose metabolism; transcriptional repressor RbsR complement(4964919..4965914) Pectobacterium wasabiae WPP163 8532972 YP_003261821.1 CDS Pecwa_4524 NC_013421.1 4965918 4966844 R catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase complement(4965918..4966844) Pectobacterium wasabiae WPP163 8532974 YP_003261822.1 CDS Pecwa_4525 NC_013421.1 4967048 4967935 R periplasmic substrate-binding component of the ATP-dependent ribose transporter; D-ribose transporter subunit RbsB complement(4967048..4967935) Pectobacterium wasabiae WPP163 8532975 YP_003261823.1 CDS rbsC NC_013421.1 4967961 4968929 R functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease complement(4967961..4968929) Pectobacterium wasabiae WPP163 8532976 YP_003261824.1 CDS Pecwa_4527 NC_013421.1 4968937 4970442 R with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein complement(4968937..4970442) Pectobacterium wasabiae WPP163 8532977 YP_003261825.1 CDS Pecwa_4528 NC_013421.1 4970450 4970869 R cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase complement(4970450..4970869) Pectobacterium wasabiae WPP163 8532978 YP_003261826.1 CDS Pecwa_4529 NC_013421.1 4971186 4971581 R PFAM: conserved hypothetical protein; KEGG: eca:ECA0009 hypothetical protein; hypothetical protein complement(4971186..4971581) Pectobacterium wasabiae WPP163 8532979 YP_003261827.1 CDS Pecwa_4530 NC_013421.1 4971826 4972488 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pct:PC1_4240 transcriptional regulator; two component transcriptional regulator, winged helix family 4971826..4972488 Pectobacterium wasabiae WPP163 8532980 YP_003261828.1 CDS Pecwa_4531 NC_013421.1 4972485 4973834 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pct:PC1_4241 histidine kinase; sensor protein QseC 4972485..4973834 Pectobacterium wasabiae WPP163 8532981 YP_003261829.1 CDS trkD NC_013421.1 4973994 4975862 R Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transporter Kup complement(4973994..4975862) Pectobacterium wasabiae WPP163 8532982 YP_003261830.1 CDS Pecwa_4533 NC_013421.1 4976199 4977698 D interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; regulatory ATPase RavA 4976199..4977698 Pectobacterium wasabiae WPP163 8532983 YP_003261831.1 CDS yieM NC_013421.1 4977704 4979182 D contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein 4977704..4979182 Pectobacterium wasabiae WPP163 8532984 YP_003261832.1 CDS Pecwa_4535 NC_013421.1 4979179 4980171 R catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA complement(4979179..4980171) Pectobacterium wasabiae WPP163 8532985 YP_003261833.1 CDS Pecwa_4536 NC_013421.1 4980324 4980785 D transcriptional repressor of asnA which codes for aspartate-ammonia ligase; AsnC family transcriptional regulator 4980324..4980785 Pectobacterium wasabiae WPP163 8532986 YP_003261834.1 CDS Pecwa_4537 NC_013421.1 4980875 4981318 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 4980875..4981318 Pectobacterium wasabiae WPP163 8532987 YP_003261835.1 CDS Pecwa_4538 NC_013421.1 4981710 4983599 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 4981710..4983599 Pectobacterium wasabiae WPP163 8532988 YP_003261836.1 CDS gidB NC_013421.1 4983682 4984302 D glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 4983682..4984302 Pectobacterium wasabiae WPP163 8532989 YP_003261837.1 CDS Pecwa_4540 NC_013421.1 4984926 4985309 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 4984926..4985309 Pectobacterium wasabiae WPP163 8532990 YP_003261838.1 CDS Pecwa_4541 NC_013421.1 4985332 4986132 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 4985332..4986132 Pectobacterium wasabiae WPP163 8532991 YP_003261839.1 CDS Pecwa_4542 NC_013421.1 4986182 4986421 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 4986182..4986421 Pectobacterium wasabiae WPP163 8532992 YP_003261840.1 CDS Pecwa_4543 NC_013421.1 4986485 4986955 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 4986485..4986955 Pectobacterium wasabiae WPP163 8532993 YP_003261841.1 CDS Pecwa_4544 NC_013421.1 4986970 4987503 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the subunit delta is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 4986970..4987503 Pectobacterium wasabiae WPP163 8532994 YP_003261842.1 CDS Pecwa_4545 NC_013421.1 4987516 4989057 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 4987516..4989057 Pectobacterium wasabiae WPP163 8532995 YP_003261843.1 CDS Pecwa_4546 NC_013421.1 4989110 4989973 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 4989110..4989973 Pectobacterium wasabiae WPP163 8532996 YP_003261844.1 CDS Pecwa_4547 NC_013421.1 4990021 4991403 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 4990021..4991403 Pectobacterium wasabiae WPP163 8532997 YP_003261845.1 CDS atpC NC_013421.1 4991423 4991842 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 4991423..4991842 Pectobacterium wasabiae WPP163 8532998 YP_003261846.1 CDS Pecwa_4550 NC_013421.1 4992096 4992899 R TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase; KEGG: pfl:PFL_0410 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(4992096..4992899) Pectobacterium wasabiae WPP163 8533000 YP_003261847.1 CDS Pecwa_4551 NC_013421.1 4992892 4994100 R TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; amidohydrolase; KEGG: pae:PA5092 imidazolonepropionase; imidazolonepropionase complement(4992892..4994100) Pectobacterium wasabiae WPP163 8533001 YP_003261848.1 CDS Pecwa_4552 NC_013421.1 4994192 4995868 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(4994192..4995868) Pectobacterium wasabiae WPP163 8533002 YP_003261849.1 CDS Pecwa_4553 NC_013421.1 4996351 4997445 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: avi:Avi_0501 ABC transporter nucleotide binding/ATPase protein (proline/glycine/betaine); ABC transporter 4996351..4997445 Pectobacterium wasabiae WPP163 8533003 YP_003261850.1 CDS Pecwa_4554 NC_013421.1 4997442 4998086 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: avi:Avi_0502 ABC transporter membrane spanning protein (proline/glycine/betaine); binding-protein-dependent transporters inner membrane component 4997442..4998086 Pectobacterium wasabiae WPP163 8533004 YP_003261851.1 CDS Pecwa_4555 NC_013421.1 4998090 4998770 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_8400 proline/glycine betaine ABC transporter; binding-protein-dependent transporters inner membrane component 4998090..4998770 Pectobacterium wasabiae WPP163 8533005 YP_003261852.1 CDS Pecwa_4556 NC_013421.1 4998804 4999685 D PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: ara:Arad_8402 substrate-binding region of ABC-type glycine betaine transporter; substrate-binding region of ABC-type glycine betaine transporter 4998804..4999685 Pectobacterium wasabiae WPP163 8533006 YP_003261853.1 CDS Pecwa_4557 NC_013421.1 4999700 5001274 D KEGG: ara:Arad_8403 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 4999700..5001274 Pectobacterium wasabiae WPP163 8533007 YP_003261854.1 CDS Pecwa_4558 NC_013421.1 5001354 5001905 R PFAM: protein of unknown function DUF886; KEGG: pen:PSEEN5098 hypothetical protein; hypothetical protein complement(5001354..5001905) Pectobacterium wasabiae WPP163 8533008 YP_003261855.1 CDS Pecwa_4559 NC_013421.1 5001902 5002663 R KEGG: ppu:PP_5035 histidine utilization repressor; TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; transcriptional regulator, histidine utilization repressor, GntR family complement(5001902..5002663) Pectobacterium wasabiae WPP163 8533009 YP_003261856.1 CDS Pecwa_4560 NC_013421.1 5002773 5004140 D catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 5002773..5004140 Pectobacterium wasabiae WPP163 8533010 YP_003261857.1 CDS Pecwa_4562 NC_013421.1 5004461 5006695 R KEGG: eca:ECA4510 exopolygalacturonate lyase; exopolygalacturonate lyase complement(5004461..5006695) Pectobacterium wasabiae WPP163 8533012 YP_003261858.1 CDS glmU NC_013421.1 5007009 5008379 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 5007009..5008379 Pectobacterium wasabiae WPP163 8533013 YP_003261859.1 CDS Pecwa_4564 NC_013421.1 5008568 5010400 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 5008568..5010400 Pectobacterium wasabiae WPP163 8533014 YP_003261860.1 CDS Pecwa_4565 NC_013421.1 5010666 5011052 D KEGG: eca:ECA4507 lipoprotein; lipoprotein 5010666..5011052 Pectobacterium wasabiae WPP163 8533015 YP_003261861.1 CDS Pecwa_4566 NC_013421.1 5011142 5012209 D PFAM: O-methyltransferase family 2; methyltransferase type 12; KEGG: efe:EFER_3450 methyltransferase; O-methyltransferase family 2 5011142..5012209 Pectobacterium wasabiae WPP163 8533016 YP_003261862.1 CDS Pecwa_4567 NC_013421.1 5012253 5012981 D KEGG: eca:ECA4506 hypothetical protein; hypothetical protein 5012253..5012981 Pectobacterium wasabiae WPP163 8533017 YP_003261863.1 CDS Pecwa_4568 NC_013421.1 5012974 5013762 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: eca:ECA4505 acyltransferase; phospholipid/glycerol acyltransferase 5012974..5013762 Pectobacterium wasabiae WPP163 8533018 YP_003261864.1 CDS Pecwa_4569 NC_013421.1 5013782 5014039 D KEGG: eca:ECA4504 acyl carrier protein; hypothetical protein 5013782..5014039 Pectobacterium wasabiae WPP163 8533019 YP_003261865.1 CDS Pecwa_4570 NC_013421.1 5014071 5014319 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 5014071..5014319 Pectobacterium wasabiae WPP163 8533020 YP_003261866.1 CDS Pecwa_4571 NC_013421.1 5014332 5014895 D KEGG: eca:ECA4502 hypothetical protein; hypothetical protein 5014332..5014895 Pectobacterium wasabiae WPP163 8533021 YP_003261867.1 CDS Pecwa_4572 NC_013421.1 5014892 5016247 D PFAM: AMP-dependent synthetase and ligase; KEGG: eca:ECA4501 AMP-binding enzyme; AMP-dependent synthetase and ligase 5014892..5016247 Pectobacterium wasabiae WPP163 8533022 YP_003261868.1 CDS Pecwa_4573 NC_013421.1 5016234 5016623 D PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: eca:ECA4500 hypothetical protein; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 5016234..5016623 Pectobacterium wasabiae WPP163 8533023 YP_003261869.1 CDS Pecwa_4574 NC_013421.1 5016614 5018329 D PFAM: glycosyl transferase family 2; KEGG: eca:ECA4499 glycosyl transferase; family 2 glycosyl transferase 5016614..5018329 Pectobacterium wasabiae WPP163 8533024 YP_003261870.1 CDS Pecwa_4575 NC_013421.1 5018329 5018751 D PFAM: thioesterase superfamily protein; KEGG: eca:ECA4498 thioesterase; thioesterase superfamily protein 5018329..5018751 Pectobacterium wasabiae WPP163 8533025 YP_003261871.1 CDS Pecwa_4576 NC_013421.1 5018748 5019353 D PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: eca:ECA4497 hypothetical protein; outer membrane lipoprotein carrier protein LolA 5018748..5019353 Pectobacterium wasabiae WPP163 8533026 YP_003261872.1 CDS Pecwa_4577 NC_013421.1 5019325 5021646 D KEGG: eca:ECA4496 hypothetical protein; hypothetical protein 5019325..5021646 Pectobacterium wasabiae WPP163 8533027 YP_003261873.1 CDS Pecwa_4578 NC_013421.1 5021643 5022218 D KEGG: eca:ECA4495 lipoprotein; lipoprotein 5021643..5022218 Pectobacterium wasabiae WPP163 8533028 YP_003261874.1 CDS Pecwa_4579 NC_013421.1 5022220 5023377 D FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 5022220..5023377 Pectobacterium wasabiae WPP163 8533029 YP_003261875.1 CDS Pecwa_4580 NC_013421.1 5023370 5023852 D PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: eca:ECA4493 beta-hydroxydecanoyl-ACP dehydrase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 5023370..5023852 Pectobacterium wasabiae WPP163 8533030 YP_003261876.1 CDS fabG NC_013421.1 5023891 5024622 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 5023891..5024622 Pectobacterium wasabiae WPP163 8533031 YP_003261877.1 CDS Pecwa_4582 NC_013421.1 5024622 5025848 D FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 5024622..5025848 Pectobacterium wasabiae WPP163 8533032 YP_003261878.1 CDS Pecwa_4583 NC_013421.1 5025954 5027120 R PFAM: metallophosphoesterase; KEGG: sgl:SG1888 hypothetical protein; metallophosphoesterase complement(5025954..5027120) Pectobacterium wasabiae WPP163 8533033 YP_003261879.1 CDS Pecwa_4584 NC_013421.1 5027582 5028622 D TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_4263 phosphate ABC transporter periplasmic phosphate-binding protein; phosphate ABC transporter substrate-binding protein 5027582..5028622 Pectobacterium wasabiae WPP163 8533034 YP_003261880.1 CDS pstC NC_013421.1 5028784 5029743 D part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate ABC transporter permease 5028784..5029743 Pectobacterium wasabiae WPP163 8533035 YP_003261881.1 CDS pstA NC_013421.1 5029743 5030630 D Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate ABC transporter permease 5029743..5030630 Pectobacterium wasabiae WPP163 8533036 YP_003261882.1 CDS pstB NC_013421.1 5030733 5031506 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 5030733..5031506 Pectobacterium wasabiae WPP163 8533037 YP_003261883.1 CDS Pecwa_4588 NC_013421.1 5031520 5032251 D regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 5031520..5032251 Pectobacterium wasabiae WPP163 8533038 YP_003261884.1 CDS Pecwa_4589 NC_013421.1 5032297 5032863 R PFAM: cupin; hypothetical protein; SMART: hypothetical protein; KEGG: eca:ECA4472 DNA-binding protein; XRE family transcriptional regulator complement(5032297..5032863) Pectobacterium wasabiae WPP163 8533039 YP_003261885.1 CDS Pecwa_4590 NC_013421.1 5032957 5034141 D TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transporter; xanthine/uracil/vitamin C permease; KEGG: eca:ECA4471 benzoate transporter; benzoate transporter 5032957..5034141 Pectobacterium wasabiae WPP163 8533040 YP_003261886.1 CDS Pecwa_4591 NC_013421.1 5034269 5035105 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: eca:ECA4470 extracellular solute-binding protein; family 3 extracellular solute-binding protein 5034269..5035105 Pectobacterium wasabiae WPP163 8533041 YP_003261887.1 CDS Pecwa_4592 NC_013421.1 5035322 5036065 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4468 binding-protein-dependent transporter inner membrane component; polar amino acid ABC transporter inner membrane protein 5035322..5036065 Pectobacterium wasabiae WPP163 8533042 YP_003261888.1 CDS Pecwa_4593 NC_013421.1 5036067 5036795 D TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA4467 binding-protein-dependent transporter inner membrane component; polar amino acid ABC transporter inner membrane protein 5036067..5036795 Pectobacterium wasabiae WPP163 8533043 YP_003261889.1 CDS Pecwa_4594 NC_013421.1 5036819 5037484 R YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; 6-phosphogluconate phosphatase complement(5036819..5037484) Pectobacterium wasabiae WPP163 8533044 YP_003261890.1 CDS Pecwa_4595 NC_013421.1 5037839 5039176 D PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: pct:PC1_4275 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 5037839..5039176 Pectobacterium wasabiae WPP163 8533045 YP_003261891.1 CDS Pecwa_4596 NC_013421.1 5039232 5039975 R KEGG: eca:ECA4463 hypothetical protein; hypothetical protein complement(5039232..5039975) Pectobacterium wasabiae WPP163 8533046 YP_003261892.1 CDS Pecwa_4597 NC_013421.1 5040162 5040671 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pct:PC1_4277 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(5040162..5040671) Pectobacterium wasabiae WPP163 8533047 YP_003261893.1 CDS Pecwa_4598 NC_013421.1 5040668 5042692 R unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); oxidoreductase Fe-S binding subunit complement(5040668..5042692) Pectobacterium wasabiae WPP163 8533048 YP_003261894.1 CDS Pecwa_4599 NC_013421.1 5042975 5043076 R hypothetical protein complement(5042975..5043076) Pectobacterium wasabiae WPP163 8533049 YP_003261895.1 CDS Pecwa_4600 NC_013421.1 5043120 5043791 D PFAM: Curli production assembly/transport component CsgG; KEGG: pct:PC1_4279 curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 5043120..5043791 Pectobacterium wasabiae WPP163 8533050 YP_003261896.1 CDS Pecwa_4601 NC_013421.1 5043810 5044169 D KEGG: eca:ECA4459 lipoprotein; lipoprotein 5043810..5044169 Pectobacterium wasabiae WPP163 8533051 YP_003261897.1 CDS Pecwa_4602 NC_013421.1 5044166 5044825 D PFAM: protein of unknown function DUF799; KEGG: eca:ECA4458 lipoprotein; hypothetical protein 5044166..5044825 Pectobacterium wasabiae WPP163 8533052 YP_003261898.1 CDS Pecwa_4603 NC_013421.1 5044919 5046421 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4457 methyl viologen resistance protein; major facilitator superfamily protein complement(5044919..5046421) Pectobacterium wasabiae WPP163 8533053 YP_003261899.1 CDS Pecwa_4604 NC_013421.1 5046524 5047993 R KEGG: pct:PC1_4283 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(5046524..5047993) Pectobacterium wasabiae WPP163 8533054 YP_003261900.1 CDS Pecwa_4605 NC_013421.1 5048184 5049068 R KEGG: pct:PC1_4284 hypothetical protein; hypothetical protein complement(5048184..5049068) Pectobacterium wasabiae WPP163 8533055 YP_003261901.1 CDS pgaA NC_013421.1 5049272 5051734 D outer membrane protein essential for the synthesis of poly-beta-1,6-N-acetyl-D-glucosamine (PGA); adhesin required for biofilm formation; PgaA (HmsH) seems to translocate and/or dock PGA to the cell surface; member of the hmsHFRS (ycdSRQP or pgaABCD in Escherichia coli) operon in Yersinia; outer membrane protein PgaA 5049272..5051734 Pectobacterium wasabiae WPP163 8533056 YP_003261902.1 CDS pgaB NC_013421.1 5051746 5053761 D in Yersinia this protein is involved in biofilm formation and hemin adsorption; related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1,6-N-acetyl-D-glucosamine (PGA) export; outer membrane N-deacetylase 5051746..5053761 Pectobacterium wasabiae WPP163 8533057 YP_003261903.1 CDS Pecwa_4608 NC_013421.1 5053758 5055086 D predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 5053758..5055086 Pectobacterium wasabiae WPP163 8533058 YP_003261904.1 CDS Pecwa_4609 NC_013421.1 5055090 5055521 D KEGG: eca:ECA4451 hemin storage protein; hemin storage protein 5055090..5055521 Pectobacterium wasabiae WPP163 8533059 YP_003261905.1 CDS Pecwa_4610 NC_013421.1 5055630 5056064 R PFAM: helix-turn-helix HxlR type; KEGG: pct:PC1_4289 HxlR family transcriptional regulator; HxlR family transcriptional regulator complement(5055630..5056064) Pectobacterium wasabiae WPP163 8533060 YP_003261906.1 CDS Pecwa_4611 NC_013421.1 5056165 5057016 D PFAM: NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pct:PC1_4290 NmrA family protein; NmrA family protein 5056165..5057016 Pectobacterium wasabiae WPP163 8533061 YP_003261907.1 CDS Pecwa_4612 NC_013421.1 5057117 5058328 R PFAM: acyltransferase 3; KEGG: pct:PC1_4291 acyltransferase 3; acyltransferase 3 complement(5057117..5058328) Pectobacterium wasabiae WPP163 8533062 YP_003261908.1 CDS Pecwa_4613 NC_013421.1 5058892 5059161 D PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: plu:plu4901 HipB protein; hypothetical protein 5058892..5059161 Pectobacterium wasabiae WPP163 8533063 YP_003261909.1 CDS Pecwa_4614 NC_013421.1 5059228 5059371 D KEGG: plu:plu4900 HipA protein; HipA protein 5059228..5059371 Pectobacterium wasabiae WPP163 8533064 YP_003261910.1 CDS trmE NC_013421.1 5059405 5060769 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(5059405..5060769) Pectobacterium wasabiae WPP163 8533065 YP_003261911.1 CDS Pecwa_4616 NC_013421.1 5060898 5062529 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(5060898..5062529) Pectobacterium wasabiae WPP163 8533066 YP_003261912.1 CDS Pecwa_4617 NC_013421.1 5062879 5063076 D KEGG: pct:PC1_4294 hypothetical protein; hypothetical protein 5062879..5063076 Pectobacterium wasabiae WPP163 8533067 YP_003261913.1 CDS rpmH NC_013421.1 5063131 5063271 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(5063131..5063271) Pectobacterium wasabiae WPP163 8533068 Pecwa_R0002 tRNA Pecwa_R0002 NC_013421.1 217633 217708 D tRNA-Glu 217633..217708 Pectobacterium wasabiae WPP163 8528551 Pecwa_R0005 tRNA Pecwa_R0005 NC_013421.1 225051 225126 D tRNA-Thr 225051..225126 Pectobacterium wasabiae WPP163 8528557 Pecwa_R0006 tRNA Pecwa_R0006 NC_013421.1 225142 225226 D tRNA-Tyr 225142..225226 Pectobacterium wasabiae WPP163 8528558 Pecwa_R0007 tRNA Pecwa_R0007 NC_013421.1 225356 225430 D tRNA-Gly 225356..225430 Pectobacterium wasabiae WPP163 8528559 Pecwa_R0008 tRNA Pecwa_R0008 NC_013421.1 225437 225512 D tRNA-Thr 225437..225512 Pectobacterium wasabiae WPP163 8528560 Pecwa_R0010 tRNA Pecwa_R0010 NC_013421.1 259351 259426 D tRNA-Glu 259351..259426 Pectobacterium wasabiae WPP163 8528589 Pecwa_R0014 tRNA Pecwa_R0014 NC_013421.1 482784 482868 D tRNA-Leu 482784..482868 Pectobacterium wasabiae WPP163 8528810 Pecwa_R0016 tRNA Pecwa_R0016 NC_013421.1 753354 753429 R tRNA-Phe complement(753354..753429) Pectobacterium wasabiae WPP163 8529084 Pecwa_R0017 tRNA Pecwa_R0017 NC_013421.1 829855 829930 R tRNA-Met complement(829855..829930) Pectobacterium wasabiae WPP163 8529148 Pecwa_R0018 tRNA Pecwa_R0018 NC_013421.1 852224 852310 D tRNA-Leu 852224..852310 Pectobacterium wasabiae WPP163 8529173 Pecwa_R0019 tRNA Pecwa_R0019 NC_013421.1 853804 853880 D tRNA-Met 853804..853880 Pectobacterium wasabiae WPP163 8529174 Pecwa_R0020 tRNA Pecwa_R0020 NC_013421.1 882609 882695 D tRNA-Leu 882609..882695 Pectobacterium wasabiae WPP163 8529202 Pecwa_R0021 tRNA Pecwa_R0021 NC_013421.1 882773 882859 D tRNA-Leu 882773..882859 Pectobacterium wasabiae WPP163 8529203 Pecwa_R0022 tRNA Pecwa_R0022 NC_013421.1 882921 883007 D tRNA-Leu 882921..883007 Pectobacterium wasabiae WPP163 8529204 Pecwa_R0023 tRNA Pecwa_R0023 NC_013421.1 922664 922737 D tRNA-Gly 922664..922737 Pectobacterium wasabiae WPP163 8529240 Pecwa_R0025 tRNA Pecwa_R0025 NC_013421.1 1205812 1205904 D tRNA-Ser 1205812..1205904 Pectobacterium wasabiae WPP163 8529492 Pecwa_R0026 tRNA Pecwa_R0026 NC_013421.1 1205913 1205989 D tRNA-Arg 1205913..1205989 Pectobacterium wasabiae WPP163 8529493 Pecwa_R0028 tRNA Pecwa_R0028 NC_013421.1 1229166 1229242 D tRNA-Ile 1229166..1229242 Pectobacterium wasabiae WPP163 8529516 Pecwa_R0029 tRNA Pecwa_R0029 NC_013421.1 1229285 1229360 D tRNA-Ala 1229285..1229360 Pectobacterium wasabiae WPP163 8529517 Pecwa_R0032 tRNA Pecwa_R0032 NC_013421.1 1232799 1232875 D tRNA-Asp 1232799..1232875 Pectobacterium wasabiae WPP163 8529520 Pecwa_R0033 tRNA Pecwa_R0033 NC_013421.1 1238363 1238439 D tRNA-Asp 1238363..1238439 Pectobacterium wasabiae WPP163 8529527 Pecwa_R0034 tRNA Pecwa_R0034 NC_013421.1 1287718 1287793 R tRNA-Lys complement(1287718..1287793) Pectobacterium wasabiae WPP163 8529574 Pecwa_R0035 tRNA Pecwa_R0035 NC_013421.1 1287801 1287876 R tRNA-Val complement(1287801..1287876) Pectobacterium wasabiae WPP163 8529575 Pecwa_R0036 tRNA Pecwa_R0036 NC_013421.1 1287943 1288018 R tRNA-Val complement(1287943..1288018) Pectobacterium wasabiae WPP163 8529576 Pecwa_R0037 tRNA Pecwa_R0037 NC_013421.1 1288076 1288151 R tRNA-Val complement(1288076..1288151) Pectobacterium wasabiae WPP163 8529577 Pecwa_R0038 tRNA Pecwa_R0038 NC_013421.1 1291113 1291188 D tRNA-Ala 1291113..1291188 Pectobacterium wasabiae WPP163 8529580 Pecwa_R0039 tRNA Pecwa_R0039 NC_013421.1 1291236 1291311 D tRNA-Ala 1291236..1291311 Pectobacterium wasabiae WPP163 8529581 Pecwa_R0040 tRNA Pecwa_R0040 NC_013421.1 1520488 1520564 R tRNA-Arg complement(1520488..1520564) Pectobacterium wasabiae WPP163 8529793 Pecwa_R0041 tRNA Pecwa_R0041 NC_013421.1 1556297 1556371 R tRNA-Arg complement(1556297..1556371) Pectobacterium wasabiae WPP163 8529827 Pecwa_R0042 tRNA Pecwa_R0042 NC_013421.1 1716182 1716257 R tRNA-Asn complement(1716182..1716257) Pectobacterium wasabiae WPP163 8529977 Pecwa_R0043 tRNA Pecwa_R0043 NC_013421.1 1717246 1717335 D tRNA-Ser 1717246..1717335 Pectobacterium wasabiae WPP163 8529979 Pecwa_R0044 tRNA Pecwa_R0044 NC_013421.1 1719363 1719438 R tRNA-Asn complement(1719363..1719438) Pectobacterium wasabiae WPP163 8529981 Pecwa_R0045 tRNA Pecwa_R0045 NC_013421.1 1722808 1722883 D tRNA-Lys 1722808..1722883 Pectobacterium wasabiae WPP163 8529985 Pecwa_R0046 tRNA Pecwa_R0046 NC_013421.1 1728112 1728187 D tRNA-Gly 1728112..1728187 Pectobacterium wasabiae WPP163 8529991 Pecwa_R0047 tRNA Pecwa_R0047 NC_013421.1 1807764 1807837 D tRNA-Cys 1807764..1807837 Pectobacterium wasabiae WPP163 8530064 Pecwa_R0048 tRNA Pecwa_R0048 NC_013421.1 1807846 1807932 D tRNA-Leu 1807846..1807932 Pectobacterium wasabiae WPP163 8530065 Pecwa_R0049 tRNA Pecwa_R0049 NC_013421.1 1910111 1910186 R tRNA-Asn complement(1910111..1910186) Pectobacterium wasabiae WPP163 8530164 Pecwa_R0050 tRNA Pecwa_R0050 NC_013421.1 2064175 2064251 R tRNA-Pro complement(2064175..2064251) Pectobacterium wasabiae WPP163 8530301 Pecwa_R0051 tRNA Pecwa_R0051 NC_013421.1 2267346 2267435 R tRNA-Ser complement(2267346..2267435) Pectobacterium wasabiae WPP163 8530474 Pecwa_R0052 tRNA Pecwa_R0052 NC_013421.1 2465007 2465091 R tRNA-Tyr complement(2465007..2465091) Pectobacterium wasabiae WPP163 8530677 Pecwa_R0053 tRNA Pecwa_R0053 NC_013421.1 2927080 2927156 D tRNA-Val 2927080..2927156 Pectobacterium wasabiae WPP163 8531077 Pecwa_R0054 tRNA Pecwa_R0054 NC_013421.1 2943706 2943782 D tRNA-Val 2943706..2943782 Pectobacterium wasabiae WPP163 8531092 Pecwa_R0055 tRNA Pecwa_R0055 NC_013421.1 2956599 2956674 R tRNA-Gly complement(2956599..2956674) Pectobacterium wasabiae WPP163 8531103 Pecwa_R0056 tRNA Pecwa_R0056 NC_013421.1 3108579 3108666 R tRNA-Ser complement(3108579..3108666) Pectobacterium wasabiae WPP163 8531250 Pecwa_R0057 tRNA Pecwa_R0057 NC_013421.1 3125709 3125798 D tRNA-Ser 3125709..3125798 Pectobacterium wasabiae WPP163 8531270 Pecwa_R0058 tRNA Pecwa_R0058 NC_013421.1 3331473 3331560 R tRNA-Ser complement(3331473..3331560) Pectobacterium wasabiae WPP163 8531462 Pecwa_R0059 tRNA Pecwa_R0059 NC_013421.1 3363160 3363235 R tRNA-Lys complement(3363160..3363235) Pectobacterium wasabiae WPP163 8531492 Pecwa_R0060 tRNA Pecwa_R0060 NC_013421.1 3363440 3363515 R tRNA-Lys complement(3363440..3363515) Pectobacterium wasabiae WPP163 8531493 Pecwa_R0061 tRNA Pecwa_R0061 NC_013421.1 3414920 3414996 D tRNA-Met 3414920..3414996 Pectobacterium wasabiae WPP163 8531541 Pecwa_R0062 tRNA Pecwa_R0062 NC_013421.1 3415005 3415089 D tRNA-Leu 3415005..3415089 Pectobacterium wasabiae WPP163 8531542 Pecwa_R0063 tRNA Pecwa_R0063 NC_013421.1 3415146 3415220 D tRNA-Gln 3415146..3415220 Pectobacterium wasabiae WPP163 8531543 Pecwa_R0064 tRNA Pecwa_R0064 NC_013421.1 3415256 3415330 D tRNA-Gln 3415256..3415330 Pectobacterium wasabiae WPP163 8531544 Pecwa_R0065 tRNA Pecwa_R0065 NC_013421.1 3415385 3415461 D tRNA-Met 3415385..3415461 Pectobacterium wasabiae WPP163 8531545 Pecwa_R0066 tRNA Pecwa_R0066 NC_013421.1 3415468 3415542 D tRNA-Gln 3415468..3415542 Pectobacterium wasabiae WPP163 8531546 Pecwa_R0068 tRNA Pecwa_R0068 NC_013421.1 3711598 3711674 D tRNA-Met 3711598..3711674 Pectobacterium wasabiae WPP163 8531799 Pecwa_R0069 tRNA Pecwa_R0069 NC_013421.1 3711723 3711799 D tRNA-Met 3711723..3711799 Pectobacterium wasabiae WPP163 8531800 Pecwa_R0070 tRNA Pecwa_R0070 NC_013421.1 3711848 3711924 D tRNA-Met 3711848..3711924 Pectobacterium wasabiae WPP163 8531801 Pecwa_R0071 tRNA Pecwa_R0071 NC_013421.1 3755450 3755525 D tRNA-Phe 3755450..3755525 Pectobacterium wasabiae WPP163 8531837 Pecwa_R0072 tRNA Pecwa_R0072 NC_013421.1 3764502 3764577 R tRNA-Thr complement(3764502..3764577) Pectobacterium wasabiae WPP163 8531848 Pecwa_R0074 tRNA Pecwa_R0074 NC_013421.1 3843153 3843228 R tRNA-Thr complement(3843153..3843228) Pectobacterium wasabiae WPP163 8531918 Pecwa_R0077 tRNA Pecwa_R0077 NC_013421.1 3846644 3846719 R tRNA-Glu complement(3846644..3846719) Pectobacterium wasabiae WPP163 8531921 Pecwa_R0079 tRNA Pecwa_R0079 NC_013421.1 4343843 4343918 R tRNA-Gly complement(4343843..4343918) Pectobacterium wasabiae WPP163 8532357 Pecwa_R0080 tRNA Pecwa_R0080 NC_013421.1 4343995 4344070 R tRNA-Gly complement(4343995..4344070) Pectobacterium wasabiae WPP163 8532358 Pecwa_R0083 tRNA Pecwa_R0083 NC_013421.1 4384839 4384914 R tRNA-Ala complement(4384839..4384914) Pectobacterium wasabiae WPP163 8532391 Pecwa_R0084 tRNA Pecwa_R0084 NC_013421.1 4384957 4385033 R tRNA-Ile complement(4384957..4385033) Pectobacterium wasabiae WPP163 8532392 Pecwa_R0086 tRNA Pecwa_R0086 NC_013421.1 4619719 4619795 R tRNA-Pro complement(4619719..4619795) Pectobacterium wasabiae WPP163 8532625 Pecwa_R0087 tRNA Pecwa_R0087 NC_013421.1 4619839 4619925 R tRNA-Leu complement(4619839..4619925) Pectobacterium wasabiae WPP163 8532626 Pecwa_R0088 tRNA Pecwa_R0088 NC_013421.1 4619978 4620053 R tRNA-His complement(4619978..4620053) Pectobacterium wasabiae WPP163 8532627 Pecwa_R0089 tRNA Pecwa_R0089 NC_013421.1 4620171 4620247 R tRNA-Arg complement(4620171..4620247) Pectobacterium wasabiae WPP163 8532628 Pecwa_R0090 tRNA Pecwa_R0090 NC_013421.1 4667656 4667731 R tRNA-Trp complement(4667656..4667731) Pectobacterium wasabiae WPP163 8532667 Pecwa_R0091 tRNA Pecwa_R0091 NC_013421.1 4667786 4667862 R tRNA-Asp complement(4667786..4667862) Pectobacterium wasabiae WPP163 8532668 Pecwa_R0094 tRNA Pecwa_R0094 NC_013421.1 4671313 4671388 R tRNA-Glu complement(4671313..4671388) Pectobacterium wasabiae WPP163 8532671 Pecwa_R0096 tRNA Pecwa_R0096 NC_013421.1 4923534 4923610 R tRNA-Pro complement(4923534..4923610) Pectobacterium wasabiae WPP163 8532933 Pecwa_R0099 tRNA Pecwa_R0099 NC_013421.1 4962679 4962754 R tRNA-Ala complement(4962679..4962754) Pectobacterium wasabiae WPP163 8532969 Pecwa_R0100 tRNA Pecwa_R0100 NC_013421.1 4962797 4962873 R tRNA-Ile complement(4962797..4962873) Pectobacterium wasabiae WPP163 8532970 Pecwa_R0001 rRNA Pecwa_R0001 NC_013421.1 215956 217486 D 16S ribosomal RNA 215956..217486 Pectobacterium wasabiae WPP163 8528550 Pecwa_R0003 rRNA Pecwa_R0003 NC_013421.1 217945 220851 D 23S ribosomal RNA 217945..220851 Pectobacterium wasabiae WPP163 8528552 Pecwa_R0004 rRNA Pecwa_R0004 NC_013421.1 220993 221107 D 5S ribosomal RNA 220993..221107 Pectobacterium wasabiae WPP163 8528553 Pecwa_R0009 rRNA Pecwa_R0009 NC_013421.1 257675 259205 D 16S ribosomal RNA 257675..259205 Pectobacterium wasabiae WPP163 8528588 Pecwa_R0011 rRNA Pecwa_R0011 NC_013421.1 259663 262568 D 23S ribosomal RNA 259663..262568 Pectobacterium wasabiae WPP163 8528590 Pecwa_R0012 rRNA Pecwa_R0012 NC_013421.1 262710 262824 D 5S ribosomal RNA 262710..262824 Pectobacterium wasabiae WPP163 8528591 Pecwa_R0027 rRNA Pecwa_R0027 NC_013421.1 1227556 1229086 D 16S ribosomal RNA 1227556..1229086 Pectobacterium wasabiae WPP163 8529515 Pecwa_R0030 rRNA Pecwa_R0030 NC_013421.1 1229585 1232490 D 23S ribosomal RNA 1229585..1232490 Pectobacterium wasabiae WPP163 8529518 Pecwa_R0031 rRNA Pecwa_R0031 NC_013421.1 1232633 1232747 D 5S ribosomal RNA 1232633..1232747 Pectobacterium wasabiae WPP163 8529519 Pecwa_R0073 rRNA Pecwa_R0073 NC_013421.1 3843000 3843114 R 5S ribosomal RNA complement(3843000..3843114) Pectobacterium wasabiae WPP163 8531917 Pecwa_R0075 rRNA Pecwa_R0075 NC_013421.1 3843246 3843360 R 5S ribosomal RNA complement(3843246..3843360) Pectobacterium wasabiae WPP163 8531919 Pecwa_R0076 rRNA Pecwa_R0076 NC_013421.1 3843502 3846407 R 23S ribosomal RNA complement(3843502..3846407) Pectobacterium wasabiae WPP163 8531920 Pecwa_R0078 rRNA Pecwa_R0078 NC_013421.1 3846865 3848395 R 16S ribosomal RNA complement(3846865..3848395) Pectobacterium wasabiae WPP163 8531922 Pecwa_R0081 rRNA Pecwa_R0081 NC_013421.1 4381452 4381566 R 5S ribosomal RNA complement(4381452..4381566) Pectobacterium wasabiae WPP163 8532389 Pecwa_R0082 rRNA Pecwa_R0082 NC_013421.1 4381709 4384614 R 23S ribosomal RNA complement(4381709..4384614) Pectobacterium wasabiae WPP163 8532390 Pecwa_R0085 rRNA Pecwa_R0085 NC_013421.1 4385113 4386643 R 16S ribosomal RNA complement(4385113..4386643) Pectobacterium wasabiae WPP163 8532393 Pecwa_R0092 rRNA Pecwa_R0092 NC_013421.1 4667914 4668028 R 5S ribosomal RNA complement(4667914..4668028) Pectobacterium wasabiae WPP163 8532669 Pecwa_R0093 rRNA Pecwa_R0093 NC_013421.1 4668171 4671076 R 23S ribosomal RNA complement(4668171..4671076) Pectobacterium wasabiae WPP163 8532670 Pecwa_R0095 rRNA Pecwa_R0095 NC_013421.1 4671535 4673065 R 16S ribosomal RNA complement(4671535..4673065) Pectobacterium wasabiae WPP163 8532672 Pecwa_R0097 rRNA Pecwa_R0097 NC_013421.1 4959293 4959407 R 5S ribosomal RNA complement(4959293..4959407) Pectobacterium wasabiae WPP163 8532967 Pecwa_R0098 rRNA Pecwa_R0098 NC_013421.1 4959549 4962454 R 23S ribosomal RNA complement(4959549..4962454) Pectobacterium wasabiae WPP163 8532968 Pecwa_R0101 rRNA Pecwa_R0101 NC_013421.1 4962953 4964483 R 16S ribosomal RNA complement(4962953..4964483) Pectobacterium wasabiae WPP163 8532971