-- dump date   	20140619_233106
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_002016977.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_002016978.1	KEGG: plt:Plut_0001 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain
YP_002016979.1	TIGRFAM: DNA replication and repair protein RecF; KEGG: pvi:Cvib_0003 DNA replication and repair protein RecF
YP_002016980.1	KEGG: plt:Plut_0003 hypothetical protein
YP_002016981.1	PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: pvi:Cvib_0005 beta-lactamase domain protein
YP_002016982.1	PFAM: DNA polymerase B exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: cph:Cpha266_0027 DNA polymerase B region
YP_002016983.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_002016985.1	KEGG: cph:Cpha266_0029 thiosulfate-binding protein SoxY
YP_002016986.1	PFAM: Sulphur oxidation protein SoxZ; KEGG: cph:Cpha266_0030 sulfur oxidation protein SoxZ
YP_002016987.1	PFAM: cytochrome c class I; KEGG: cph:Cpha266_0031 sulfide dehydrogenase (flavocytochrome), cytochrome c subunit
YP_002016988.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; KEGG: cph:Cpha266_0032 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit
YP_002016989.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_002016990.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_002016991.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: pvi:Cvib_0012 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_002016992.1	KEGG: cch:Cag_0029 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II
YP_002016993.1	PFAM: protein of unknown function UPF0102; KEGG: cph:Cpha266_0037 hypothetical protein
YP_002016994.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_002016995.1	PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1465 hypothetical protein
YP_002016996.1	PFAM: HicB family protein; KEGG: cph:Cpha266_2191 HicB family protein
YP_002016997.1	KEGG: cph:Cpha266_2192 HicA protein
YP_002016999.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: cph:Cpha266_0040 ribonuclease, Rne/Rng family
YP_002017000.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_002017001.1	KEGG: plt:Plut_0014 peptidase S41A, C-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_002017002.1	KEGG: cch:Cag_0034 hypothetical protein
YP_002017003.1	TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: cch:Cag_0035 geranylgeranyl reductase
YP_002017004.1	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002017005.1	PFAM: DsrE family protein; KEGG: cch:Cag_1216 hypothetical protein
YP_002017006.1	PFAM: protein of unknown function UPF0153; KEGG: cte:CT0872 hypothetical protein
YP_002017008.1	KEGG: cch:Cag_1214 hypothetical protein
YP_002017009.1	KEGG: cch:Cag_1582 heterodisulfide reductase
YP_002017010.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase delta subunit; FAD dependent oxidoreductase; KEGG: cch:Cag_1583 heterodisulfide reductase, subunit A/hydrogenase, delta subunit
YP_002017011.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cch:Cag_1584 heterodisulfide reductase, subunit A
YP_002017013.1	catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite
YP_002017014.1	TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT0864 adenylylsulfate reductase, subunit B
YP_002017015.1	ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
YP_002017016.1	PFAM: conserved hypothetical protein; KEGG: cte:CT0845 hypothetical protein
YP_002017018.1	KEGG: ccr:CC_3052 hypothetical protein
YP_002017019.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: cph:Cpha266_0046 ATP-dependent Clp protease adaptor protein ClpS
YP_002017020.1	PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: cph:Cpha266_0047 muramoyltetrapeptide carboxypeptidase
YP_002017021.1	PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: pvi:Cvib_0024 H+-transporting two-sector ATPase, delta/epsilon subunit
YP_002017022.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_002017023.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: pvi:Cvib_0026 redoxin domain protein
YP_002017024.1	catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP
YP_002017025.1	PFAM: protein of unknown function DUF1458; KEGG: cte:CT2229 hypothetical protein
YP_002017026.1	PFAM: zinc finger SWIM domain protein; KEGG: cph:Cpha266_1236 zinc finger, SWIM domain protein
YP_002017027.1	KEGG: cph:Cpha266_1235 SNF2-related protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases
YP_002017029.1	KEGG: fgr:FG06081.1 hypothetical protein
YP_002017030.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: plt:Plut_0053 transporter
YP_002017031.1	KEGG: cph:Cpha266_0071 helix-turn-helix domain protein
YP_002017032.1	KEGG: cph:Cpha266_0072 hypothetical protein
YP_002017033.1	TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: cte:CT2274 hypothetical protein
YP_002017034.1	TIGRFAM: addiction module component, TIGR02574 family; PFAM:  addiction module component CHP02574 family protein; KEGG: gsu:GSU0056 hypothetical protein
YP_002017035.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mae:Maeo_0832 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_002017036.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cph:Cpha266_0093 drug resistance transporter, EmrB/QacA subfamily
YP_002017037.1	PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_0094 secretion protein HlyD family protein
YP_002017038.1	PFAM: UspA domain protein; KEGG: cph:Cpha266_0095 UspA domain protein
YP_002017039.1	PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0096 outer membrane efflux protein
YP_002017040.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_0097 DNA-binding protein fis / transcriptional regulator, Fis family
YP_002017041.1	PFAM: aminotransferase class I and II; KEGG: cph:Cpha266_1972  transcriptional regulator, GntR family
YP_002017042.1	PFAM: amino acid-binding ACT domain protein; KEGG: cph:Cpha266_1971 amino acid-binding ACT domain protein
YP_002017043.1	PFAM: peptidase M12A astacin; SMART: peptidase metallopeptidase; KEGG: cph:Cpha266_0056 peptidase M12A, astacin
YP_002017044.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_0055 radical SAM protein
YP_002017045.1	KEGG: cph:Cpha266_0054 hypothetical protein
YP_002017046.1	KEGG: cph:Cpha266_1968 phenylacetate-CoA ligase
YP_002017047.1	Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
YP_002017048.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cph:Cpha266_1966 indolepyruvate ferredoxin oxidoreductase
YP_002017049.1	KEGG: cph:Cpha266_1834 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002017050.1	KEGG: cph:Cpha266_2683 hypothetical protein
YP_002017051.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_002017052.1	TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: cph:Cpha266_2681 RseP peptidase. Metallo peptidase. MEROPS family M50B
YP_002017053.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_002017054.1	KEGG: cph:Cpha266_2678 FtsH-2 peptidase. Metallo peptidase. MEROPS family M41; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002017055.1	TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: cph:Cpha266_2677 orotidine 5'-phosphate decarboxylase
YP_002017056.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_002017057.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; domain of unknown function DUF1731; KEGG: cch:Cag_0004 hypothetical protein
YP_002017058.1	PFAM: Ferritin Dps family protein; KEGG: cph:Cpha266_2674 ferritin, Dps family protein
YP_002017059.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cph:Cpha266_2672 ammonium transporter
YP_002017060.1	PFAM: nitrogen regulatory protein P-II; KEGG: cch:Cag_1998 nitrogen regulatory protein P-II (GlnB, GlnK)
YP_002017061.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: plt:Plut_0092 hypothetical protein
YP_002017062.1	PFAM: conserved hypothetical protein; KEGG: plt:Plut_0094 hypothetical protein
YP_002017063.1	PFAM: protein of unknown function UPF0079; KEGG: cph:Cpha266_2666 protein of unknown function UPF0079
YP_002017064.1	PFAM: peptidase M22 glycoprotease; KEGG: cch:Cag_1986 protease
YP_002017067.1	KEGG: syn:sll1715 hypothetical protein
YP_002017068.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: plt:Plut_0097 iojap-related protein
YP_002017069.1	KEGG: cph:Cpha266_2663 DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_002017070.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_002017072.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cph:Cpha266_0756 PHP C-terminal domain protein
YP_002017073.1	TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: cph:Cpha266_0755 catalase/peroxidase HPI
YP_002017074.1	PFAM: ferric-uptake regulator; KEGG: cph:Cpha266_0754 ferric uptake regulator, Fur family
YP_002017075.1	KEGG: cph:Cpha266_2695 hypothetical protein
YP_002017076.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: plt:Plut_0106 pterin-4A-carbinolamine dehydratase
YP_002017077.1	PFAM: thioesterase superfamily protein; KEGG: cph:Cpha266_2516 thioesterase superfamily protein
YP_002017078.1	KEGG: cch:Cag_0092 hypothetical protein
YP_002017079.1	PFAM: glycosyl transferase family 9; KEGG: cph:Cpha266_2514 glycosyl transferase, family 9
YP_002017080.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_002017081.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cph:Cpha266_2511 single-strand binding protein
YP_002017082.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_002017083.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_002017084.1	KEGG: cph:Cpha266_1405 hypothetical protein
YP_002017085.1	KEGG: cph:Cpha266_0154 rhodanese domain protein
YP_002017086.1	TIGRFAM: yecA family protein; KEGG: cph:Cpha266_0914 YecA family protein
YP_002017087.1	PFAM: protein of unknown function UPF0047; KEGG: cph:Cpha266_0833 protein of unknown function UPF0047
YP_002017088.1	KEGG: cph:Cpha266_0798 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_002017089.1	KEGG: cph:Cpha266_0162 hypothetical protein
YP_002017091.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0775 RND efflux system, outer membrane lipoprotein, NodT family
YP_002017092.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: cph:Cpha266_0776 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
YP_002017093.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_0777 efflux transporter, RND family, MFP subunit
YP_002017094.1	PFAM: regulatory protein TetR; KEGG: cph:Cpha266_0778 transcriptional regulator, TetR family
YP_002017095.1	KEGG: cph:Cpha266_1475 hypothetical protein
YP_002017096.1	KEGG: cph:Cpha266_0783 ATPase (AAA+ superfamily)
YP_002017097.1	KEGG: cph:Cpha266_0779 ATPase (AAA+ superfamily)-like
YP_002017099.1	PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region
YP_002017100.1	PFAM: transposase IS3/IS911 family protein; KEGG: net:Neut_1719 transposase IS3/IS911 family protein
YP_002017103.1	PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: ilo:IL0196 anaerobic nitric oxide reductase transcription regulator
YP_002017104.1	KEGG: nmr:Nmar_1474 hypothetical protein
YP_002017105.1	KEGG: cph:Cpha266_0773 hypothetical protein
YP_002017106.1	KEGG: cph:Cpha266_0774 hypothetical protein
YP_002017107.1	PFAM: plasmid stabilization system; KEGG: cph:Cpha266_1217 plasmid stabilization system
YP_002017108.1	KEGG: cph:Cpha266_1216 hypothetical protein
YP_002017109.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cph:Cpha266_0509 transcriptional regulator, BadM/Rrf2 family
YP_002017110.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT1701 iron-sulfur cluster-binding protein
YP_002017111.1	PFAM: hypothetical protein-containing protein; SMART: Tetratricopeptide domain protein; KEGG: pvi:Cvib_1456 hypothetical protein-containing protein
YP_002017112.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_002017113.1	PFAM: PilT protein domain protein; KEGG: cch:Cag_1433 possible NtrR protein
YP_002017114.1	KEGG: rpd:RPD_2062 SpoVT/AbrB-like
YP_002017116.1	PFAM: protein of unknown function DUF891; KEGG: plt:Plut_0606 hypothetical protein
YP_002017117.1	KEGG: cch:Cag_1578 hypothetical protein
YP_002017118.1	PFAM: DNA polymerase beta domain protein region; KEGG: cch:Cag_0015 hypothetical protein
YP_002017119.1	KEGG: cch:Cag_1579 hypothetical protein
YP_002017120.1	KEGG: gur:Gura_3207 hypothetical protein
YP_002017121.1	PFAM: protein of unknown function UPF0175; KEGG: cph:Cpha266_0647 hypothetical protein
YP_002017122.1	KEGG: cph:Cpha266_0648 hypothetical protein
YP_002017123.1	PFAM: helix-turn-helix domain protein; KEGG: plt:Plut_1818 transcriptional regulator, XRE family
YP_002017124.1	PFAM: protein of unknown function DUF1044; KEGG: plt:Plut_1817 hypothetical protein
YP_002017125.1	KEGG: vei:Veis_3132 hypothetical protein
YP_002017126.1	PFAM: Domain of unknown function DUF1828; Domain of unknown function DUF1829; KEGG: vei:Veis_3133 Lj965 prophage protein
YP_002017127.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_002017128.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_002017129.1	PFAM: ribosomal protein L35; KEGG: cch:Cag_1713 50S ribosomal protein L35
YP_002017130.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_002017131.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_002017132.1	TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: cch:Cag_1716 chlorophyllide reductase subunit Z
YP_002017133.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: cph:Cpha266_2499 glycoside hydrolase, family 3 domain protein
YP_002017134.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein
YP_002017136.1	PFAM: protein of unknown function DUF1016; KEGG: pna:Pnap_0993 protein of unknown function DUF1016
YP_002017137.1	TIGRFAM: prevent-host-death family protein; KEGG: gur:Gura_3866 prevent-host-death family protein
YP_002017138.1	PFAM: protein of unknown function DUF1526; KEGG: gur:Gura_4147 protein of unknown function DUF1526
YP_002017139.1	PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region
YP_002017140.1	PFAM: transposase IS3/IS911 family protein; KEGG: net:Neut_1719 transposase IS3/IS911 family protein
YP_002017141.1	TIGRFAM: prevent-host-death family protein; KEGG: gur:Gura_3866 prevent-host-death family protein
YP_002017142.1	PFAM: PilT protein domain protein; KEGG: gur:Gura_3865 PilT protein domain protein
YP_002017143.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pau:PA14_28840  helicase
YP_002017144.1	KEGG: pmy:Pmen_3425 hypothetical protein
YP_002017145.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: psa:PST_3463 hypothetical protein
YP_002017146.1	KEGG: gur:Gura_3956 hypothetical protein
YP_002017147.1	KEGG: gur:Gura_3957 hypothetical protein
YP_002017148.1	PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: cph:Cpha266_2495 ribonuclease III
YP_002017149.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: cch:Cag_1660 3-oxoacyl-(acyl-carrier-protein) synthase II
YP_002017150.1	carries the fatty acid chain in fatty acid biosynthesis
YP_002017151.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: plt:Plut_0131 3-oxoacyl-(acyl-carrier-protein) reductase
YP_002017152.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cph:Cpha266_2491 [acyl-carrier-protein] S-malonyltransferase
YP_002017153.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_002017154.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_002017155.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_002017156.1	PFAM: protein of unknown function DUF177; KEGG: cph:Cpha266_2487 protein of unknown function DUF177
YP_002017158.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cph:Cpha266_2478 2-isopropylmalate synthase
YP_002017159.1	PFAM: periplasmic solute binding protein; KEGG: cph:Cpha266_2476 periplasmic solute binding protein
YP_002017160.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_2475 ABC transporter related
YP_002017161.1	PFAM: ABC-3 protein; KEGG: cch:Cag_1676 ABC 3 transport family protein
YP_002017162.1	KEGG: plt:Plut_0144 Ric1 protein
YP_002017163.1	KEGG: plt:Plut_0145 hypothetical protein
YP_002017164.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cph:Cpha266_2470 glycerophosphoryl diester phosphodiesterase
YP_002017165.1	KEGG: cph:Cpha266_2467 hypothetical protein
YP_002017166.1	KEGG: plt:Plut_0150 delta 1-pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_002017167.1	PFAM: cytochrome c class I; KEGG: cch:Cag_0917 cytochrome c-555
YP_002017168.1	PFAM: cytochrome c class I; KEGG: cph:Cpha266_2463 cytochrome c, class I
YP_002017169.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_2462 radical SAM protein
YP_002017170.1	KEGG: cch:Cag_0105 hypothetical protein
YP_002017171.1	PFAM: aminotransferase class V; KEGG: cph:Cpha266_2460 serine--glyoxylate transaminase
YP_002017172.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_002017173.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: plt:Plut_0157 YajC
YP_002017174.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_002017175.1	KEGG: cch:Cag_0110 hypothetical protein
YP_002017176.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: cph:Cpha266_2455 ATPase associated with various cellular activities, AAA_3
YP_002017177.1	PFAM: von Willebrand factor A; protein of unknown function DUF58; KEGG: cph:Cpha266_2454 protein of unknown function DUF58
YP_002017178.1	KEGG: cch:Cag_0113 hypothetical protein
YP_002017179.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: cph:Cpha266_0860 OmpA/MotB domain protein
YP_002017180.1	PFAM: surface antigen msp4 family protein; KEGG: cph:Cpha266_0396 hypothetical protein
YP_002017182.1	PFAM: ATP-binding region ATPase domain protein; KEGG: dol:Dole_1520 PAS/PAC sensor hybrid histidine kinase
YP_002017183.1	KEGG: cch:Cag_0563  PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002017184.1	KEGG: cch:Cag_0562  PAS/PAC sensor protein
YP_002017185.1	KEGG: cph:Cpha266_0794 hypothetical protein
YP_002017186.1	KEGG: cch:Cag_1035 hypothetical protein
YP_002017187.1	KEGG: cch:Cag_1041 hypothetical protein
YP_002017188.1	KEGG: cph:Cpha266_0798 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_002017189.1	PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_1356 glycosyl transferase, group 1
YP_002017190.1	KEGG: cph:Cpha266_1270 hypothetical protein
YP_002017191.1	PFAM: hypothetical protein-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3497 peptidase-like
YP_002017192.1	KEGG: cph:Cpha266_2281 hypothetical protein
YP_002017193.1	KEGG: cph:Cpha266_0521 hypothetical protein
YP_002017194.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: plt:Plut_1552 thiosulphate-binding protein
YP_002017195.1	PFAM: von Willebrand factor A; KEGG: cph:Cpha266_2452 von Willebrand factor, type A
YP_002017196.1	PFAM: von Willebrand factor A; KEGG: cph:Cpha266_2451 von Willebrand factor, type A
YP_002017197.1	KEGG: cch:Cag_1877 hypothetical protein
YP_002017198.1	PFAM: AAA ATPase central domain protein; Clp domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2449 AAA ATPase, central domain protein
YP_002017199.1	KEGG: cph:Cpha266_1202 hypothetical protein
YP_002017200.1	KEGG: gvi:gll1120 unknown protein
YP_002017201.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: AAA ATPase; Tetratricopeptide domain protein; KEGG: cch:Cag_1875 hypothetical protein
YP_002017202.1	KEGG: cph:Cpha266_2448 hypothetical protein
YP_002017203.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_002017204.1	PFAM: Exonuclease VII small subunit; KEGG: cph:Cpha266_2446 exodeoxyribonuclease VII small subunit
YP_002017205.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_002017206.1	catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate
YP_002017207.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: cph:Cpha266_2443 phosphotransferase system, phosphocarrier protein HPr
YP_002017208.1	PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_2442 glycosyl transferase, group 1
YP_002017209.1	PFAM: glycosyl transferase family 2; KEGG: plt:Plut_0169 glycosyl transferase
YP_002017210.1	KEGG: cch:Cag_1865 hypothetical protein
YP_002017211.1	PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1863 glycosyl transferase, group 1 family protein
YP_002017212.1	PFAM: polysaccharide biosynthesis protein; KEGG: cch:Cag_1862 polysaccharide efflux transporter
YP_002017213.1	KEGG: cch:Cag_1857 hypothetical protein
YP_002017214.1	PFAM: HipA domain protein; KEGG: eca:ECA0127 hypothetical protein
YP_002017215.1	SMART: helix-turn-helix domain protein; KEGG: gur:Gura_3064 hypothetical protein
YP_002017216.1	KEGG: cch:Cag_0509 hypothetical protein
YP_002017217.1	PFAM: SpoVT/AbrB domain protein; KEGG: rrs:RoseRS_3308 transcriptional regulator/antitoxin, MazE
YP_002017218.1	PFAM: PemK family protein; KEGG: cch:Cag_0429 transcriptional modulator of MazE/toxin, MazF
YP_002017219.1	PFAM: HipA domain protein; KEGG: hch:HCH_01139 uncharacterized protein related to capsule biosynthesis enzyme
YP_002017220.1	PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_3064 hypothetical protein
YP_002017221.1	KEGG: sus:Acid_6999 hypothetical protein
YP_002017222.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tle:Tlet_1717 radical SAM protein
YP_002017223.1	PFAM: NUDIX hydrolase; KEGG: chu:CHU_2826 pyrophosphohydrolase related protein
YP_002017224.1	KEGG: mag:amb1154 hypothetical protein
YP_002017225.1	SMART: TIR protein; KEGG: fal:FRAAL5311 hypothetical protein; transmembrane receptor activity
YP_002017226.1	KEGG: rba:RB452 hypothetical protein
YP_002017227.1	KEGG: rba:RB453 hypothetical protein
YP_002017228.1	PFAM: transposase IS4 family protein; KEGG: amt:Amet_0623 transposase, IS4
YP_002017229.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rba:RB460 probable DEAH ATP-dependent helicase
YP_002017230.1	PFAM: plasmid stabilization system; KEGG: cph:Cpha266_0252 hypothetical protein
YP_002017231.1	TIGRFAM: addiction module component, TIGR02574 family; PFAM:  addiction module component CHP02574 family protein; KEGG: mhu:Mhun_0713 hypothetical protein
YP_002017232.1	KEGG: tde:TDE2749 hypothetical protein
YP_002017233.1	KEGG: gur:Gura_3064 hypothetical protein
YP_002017234.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_002017235.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_002017236.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002017237.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_002017238.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_002017239.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_002017240.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_002017241.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_002017242.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_002017243.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_002017244.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_002017245.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_002017246.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_002017247.1	one of the stabilizing components for the large ribosomal subunit
YP_002017248.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_002017249.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_002017250.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_002017251.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_002017252.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_002017253.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_002017254.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_002017255.1	binds 5S rRNA along with protein L5 and L25
YP_002017256.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_002017257.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_002017258.1	late assembly protein
YP_002017259.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_002017260.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pvi:Cvib_0267 methionine aminopeptidase, type I
YP_002017261.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_002017262.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_002017263.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_002017264.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_002017265.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_002017266.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_002017267.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_002017268.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_002017269.1	PFAM: Nucleotidyl transferase; KEGG: cch:Cag_1821 mannose-1-phosphate guanylyltransferase
YP_002017270.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_002017271.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_002017272.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_002017273.1	PFAM: protein of unknown function DUF77; KEGG: plt:Plut_0214 protein of unknown function DUF77
YP_002017274.1	light-independent reduction of protochlorophyllide to form chlorophyllide a
YP_002017275.1	light-independent reduction of protochlorophyllide to form chlorophyllide a
YP_002017276.1	light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production
YP_002017277.1	KEGG: sfu:Sfum_2080 hypothetical protein
YP_002017278.1	TIGRFAM: bacteriochlorophyll 4-vinyl reductase; KEGG: cch:Cag_1810 bacteriochlorophyll 4-vinyl reductase
YP_002017279.1	KEGG: cch:Cag_1809 hypothetical protein
YP_002017280.1	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose
YP_002017281.1	TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: plt:Plut_0221 histidinol-phosphate phosphatase
YP_002017282.1	KEGG: plt:Plut_0222  oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002017283.1	KEGG: cch:Cag_0197 hypothetical protein
YP_002017284.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_002017285.1	PFAM: ROK family protein; KEGG: pvi:Cvib_0291 ROK family protein
YP_002017286.1	PFAM: phosphoribosyltransferase; KEGG: plt:Plut_0226 competence protein
YP_002017287.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_002017288.1	PFAM: protein of unknown function UPF0118; KEGG: cch:Cag_0203 hypothetical protein
YP_002017289.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_002017290.1	PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2634 transposase, IS4 family protein
YP_002017291.1	KEGG: sph:MGAS10270_Spy0033 hypothetical protein
YP_002017292.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rpe:RPE_0561 DNA methylase N-4/N-6 domain protein
YP_002017294.1	PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein
YP_002017295.1	KEGG: rba:RB11248 similar to protein-S-isoprenylcysteine O-methyltransferase
YP_002017296.1	TIGRFAM: addiction module component, TIGR02574 family; PFAM:  addiction module component CHP02574 family protein; KEGG: cch:Cag_0032 hypothetical protein
YP_002017297.1	KEGG: gsu:GSU0055 hypothetical protein
YP_002017298.1	PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_2339 transposase, IS4 family protein
YP_002017299.1	KEGG: tcx:Tcr_1422 hypothetical protein
YP_002017300.1	KEGG: tcx:Tcr_1422 hypothetical protein
YP_002017302.1	SMART: HNH nuclease; KEGG: dra:DR_1533 hypothetical protein
YP_002017304.1	PFAM: PspC domain protein; KEGG: aby:ABAYE0373 hypothetical protein
YP_002017305.1	KEGG: mar:MAE_48580 hypothetical protein
YP_002017306.1	KEGG: swo:Swol_0601 signal transduction histidine kinase-like protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; SMART: PAS domain containing protein
YP_002017307.1	KEGG: cph:Cpha266_0282 ferredoxin, 2Fe-2S
YP_002017308.1	PFAM: protein of unknown function UPF0066; KEGG: ppd:Ppro_1968 protein of unknown function UPF0066
YP_002017309.1	KEGG: mbu:Mbur_0507 divergent AAA ATPase
YP_002017310.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cch:Cag_0205 bacterioferritin comigratory protein, thiol peroxidase
YP_002017311.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pvi:Cvib_0301 aminotransferase, class V
YP_002017312.1	PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cph:Cpha266_2362 nitrogen-fixing NifU domain protein
YP_002017313.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_002017314.1	catalyzes the synthesis of bacteriochlorophyll c which is the primary pigment in the chlorosomes of the photosynthetic green bacteria
YP_002017315.1	PFAM: phosphatidate cytidylyltransferase; KEGG: cph:Cpha266_2359 phosphatidate cytidylyltransferase
YP_002017316.1	PFAM: metallophosphoesterase; KEGG: cph:Cpha266_2358 metallophosphoesterase
YP_002017317.1	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
YP_002017318.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_2356 glycosyl transferase, family 2
YP_002017319.1	PFAM: WD-40 repeat protein; KEGG: cch:Cag_0213 WD-40 repeat
YP_002017320.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: cph:Cpha266_2354 cold-shock DNA-binding protein family
YP_002017321.1	KEGG: plt:Plut_0248 hypothetical protein
YP_002017322.1	KEGG: pvi:Cvib_0314 hypothetical protein
YP_002017323.1	KEGG: sit:TM1040_3853 hypothetical protein
YP_002017324.1	KEGG: cch:Cag_0740 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase
YP_002017325.1	KEGG: cph:Cpha266_1748 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase
YP_002017326.1	PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_1747 secretion protein HlyD family protein
YP_002017327.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_1746 type I secretion outer membrane protein, TolC family
YP_002017328.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_1482 ATPase
YP_002017329.1	PFAM: glycosyl transferase family 2; KEGG: cte:CT0216 glycosyl transferase
YP_002017330.1	KEGG: cte:CT0219 glycosyl transferase
YP_002017331.1	KEGG: pvi:Cvib_0686 hypothetical protein
YP_002017332.1	PFAM: glycosyl transferase family 9; KEGG: cte:CT0221 heptosyltransferase
YP_002017333.1	PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_0359 glycosyl transferase, group 1
YP_002017334.1	PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1472 glycosyl transferase
YP_002017335.1	PFAM: glycosyl transferase group 1; KEGG: pvi:Cvib_0692 glycosyl transferase, group 1
YP_002017336.1	PFAM: Abortive infection protein; KEGG: plt:Plut_1789 hypothetical protein
YP_002017337.1	PFAM: phosphatidate cytidylyltransferase; KEGG: cch:Cag_1470 phosphatidate cytidylyltransferase
YP_002017338.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: plt:Plut_1787  PTS IIA-like nitrogen-regulatory protein PtsN
YP_002017339.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_002017340.1	PFAM: glutaredoxin; glutaredoxin 2; KEGG: cte:CT0237 hypothetical protein
YP_002017341.1	KEGG: cch:Cag_1465 hypothetical protein
YP_002017342.1	KEGG: pvi:Cvib_1563 protein of unknown function DUF150
YP_002017343.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_002017344.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_002017345.1	PFAM: ribosome-binding factor A; KEGG: pvi:Cvib_1560 ribosome-binding factor A
YP_002017346.1	TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: cch:Cag_1460 tRNA pseudouridine synthase B
YP_002017347.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_002017348.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: cch:Cag_1457 hypothetical protein
YP_002017349.1	Essential for recycling GMP and indirectly, cGMP
YP_002017350.1	KEGG: plt:Plut_1772 hypothetical protein
YP_002017351.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cph:Cpha266_0377 glyoxalase/bleomycin resistance protein/dioxygenase
YP_002017352.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Nucleotidyl transferase; KEGG: pvi:Cvib_1552 UDP-N-acetylglucosamine pyrophosphorylase
YP_002017353.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
YP_002017354.1	PFAM: protein of unknown function DUF1239; KEGG: cph:Cpha266_0380 hypothetical protein
YP_002017355.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: cch:Cag_1448 outer membrane protein OmpH
YP_002017356.1	TIGRFAM: methyltransferase FkbM family; KEGG: cph:Cpha266_0382 methyltransferase FkbM family
YP_002017357.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: cph:Cpha266_0383 DNA protecting protein DprA
YP_002017358.1	PFAM: Polyprenyl synthetase; KEGG: cph:Cpha266_0384 polyprenyl synthetase
YP_002017359.1	catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate
YP_002017360.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pvi:Cvib_0153 RNA-directed DNA polymerase
YP_002017361.1	KEGG: eba:ebA7204 predicted transposase
YP_002017363.1	PFAM: PilT protein domain protein; KEGG: mar:MAE_40120 PilT-like protein
YP_002017364.1	PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_0386 protein of unknown function DUF214
YP_002017365.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_0453 ATPase
YP_002017366.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cch:Cag_0454 phosphoglucomutase/phosphomannomutase family protein
YP_002017367.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_002017368.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_002017369.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cph:Cpha266_0391 FolC bifunctional protein
YP_002017370.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_002017372.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: plt:Plut_1755 electron transfer flavoprotein beta subunit
YP_002017373.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: cch:Cag_0461 electron transfer flavoprotein alpha-subunit
YP_002017374.1	PFAM: UvrB/UvrC protein; protein of unknown function DUF151; KEGG: cph:Cpha266_0395 protein of unknown function DUF151
YP_002017375.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: cph:Cpha266_0397 surface antigen (D15)
YP_002017376.1	KEGG: plt:Plut_1750 di-trans-poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_002017377.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_002017378.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: plt:Plut_1748 succinyl-CoA ligase, alpha subunit
YP_002017379.1	KEGG: cch:Cag_0467 KpsF/GutQ; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_002017380.1	KEGG: cph:Cpha266_0402 hypothetical protein
YP_002017381.1	PFAM: polysaccharide biosynthesis protein; KEGG: cch:Cag_0469 polysaccharide biosynthesis protein
YP_002017382.1	KEGG: pvi:Cvib_1524 hypothetical protein
YP_002017383.1	KEGG: pvi:Cvib_1523 hypothetical protein
YP_002017384.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cph:Cpha266_0408 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_002017385.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: plt:Plut_1740 phosphoglucomutase
YP_002017386.1	TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; KEGG: cph:Cpha266_0411 lipid-A-disaccharide synthase
YP_002017387.1	KEGG: cch:Cag_0476 hypothetical protein
YP_002017388.1	KEGG: cph:Cpha266_2281 hypothetical protein
YP_002017389.1	PFAM: hypothetical protein-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3497 peptidase-like
YP_002017390.1	these proteins belong to a family of oxidoreductases related to the NADPH-dependent glutamate synthase
YP_002017391.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_002017392.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_002017393.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_002017394.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_002017395.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_002017396.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pmo:Pmob_0755 peptidase S8 and S53 subtilisin kexin sedolisin
YP_002017397.1	KEGG: bxe:Bxe_A1213 hypothetical protein
YP_002017398.1	PFAM: protein of unknown function UPF0150; KEGG: noc:Noc_0168 hypothetical protein
YP_002017399.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_002017400.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: plt:Plut_1730 rod shape-determining protein RodA
YP_002017401.1	KEGG: plt:Plut_1729 hypothetical protein
YP_002017402.1	KEGG: cph:Cpha266_0422 RNA modification enzyme, MiaB family; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: radical SAM protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002017403.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_002017404.1	PFAM: histone family protein DNA-binding protein; KEGG: cph:Cpha266_0424 histone family protein DNA-binding protein
YP_002017405.1	KEGG: plt:Plut_1723 hypothetical protein
YP_002017406.1	KEGG: pvi:Cvib_1504 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002017407.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_002017408.1	PFAM: hydroxyneurosporene synthase; KEGG: cph:Cpha266_0428 hydroxyneurosporene synthase
YP_002017409.1	PFAM: Rieske [2Fe-2S] domain protein; Cytochrome b6-f complex Fe-S subunit; KEGG: cph:Cpha266_0429 Plastoquinol--plastocyanin reductase
YP_002017410.1	PFAM: Cytochrome b/b6 domain; KEGG: cph:Cpha266_0430 cytochrome b/b6, N-terminal domain
YP_002017411.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: plt:Plut_1717 alpha amylase, catalytic subdomain
YP_002017412.1	KEGG: cph:Cpha266_0432 hypothetical protein
YP_002017413.1	KEGG: cph:Cpha266_0433 hypothetical protein
YP_002017414.1	KEGG: cph:Cpha266_0434 hypothetical protein
YP_002017415.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: plt:Plut_1713 3-oxoacyl-(acyl-carrier-protein) reductase
YP_002017416.1	KEGG: cph:Cpha266_0452 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase
YP_002017417.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cph:Cpha266_0453 molybdate ABC transporter, inner membrane subunit
YP_002017418.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cph:Cpha266_0454 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_002017419.1	TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: cph:Cpha266_0455 ModD protein
YP_002017420.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_1685 ABC transporter related
YP_002017421.1	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_1684 ABC transporter related
YP_002017422.1	PFAM: inner-membrane translocator; KEGG: cph:Cpha266_1683 inner-membrane translocator
YP_002017423.1	PFAM: Extracellular ligand-binding receptor; KEGG: cph:Cpha266_1682 extracellular ligand-binding receptor
YP_002017424.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_0264 ATPase
YP_002017425.1	KEGG: cph:Cpha266_0474 hypothetical protein
YP_002017426.1	KEGG: cch:Cag_0275 NAD-dependent DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase
YP_002017427.1	PFAM: VanZ family protein; KEGG: cph:Cpha266_0477 hypothetical protein
YP_002017428.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_0478 demethylmenaquinone methyltransferase
YP_002017429.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
YP_002017430.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cph:Cpha266_0480 efflux transporter, RND family, MFP subunit
YP_002017431.1	PFAM: ferrochelatase; KEGG: cph:Cpha266_0481 ferrochelatase
YP_002017432.1	PFAM: protein of unknown function DUF88; KEGG: cph:Cpha266_0482 protein of unknown function DUF88
YP_002017433.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_0484 ABC transporter related
YP_002017434.1	PFAM: cobalt transport protein; KEGG: cph:Cpha266_0485 cobalt transport protein
YP_002017435.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cph:Cpha266_0486 cobalamin (vitamin B12) biosynthesis CbiM protein
YP_002017436.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_002017437.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cph:Cpha266_0490 ferredoxin--NADP(+) reductase subunit alpha
YP_002017438.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_002017439.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_002017440.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cch:Cag_0542 pseudouridine synthase, Rsu
YP_002017441.1	KEGG: pvi:Cvib_1472 hypothetical protein
YP_002017442.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: cph:Cpha266_0496 translation factor SUA5
YP_002017443.1	PFAM: phosphatidate cytidylyltransferase; KEGG: pvi:Cvib_1470 phosphatidate cytidylyltransferase
YP_002017444.1	PFAM: Ppx/GppA phosphatase; KEGG: cch:Cag_0423 exopolyphosphatase
YP_002017445.1	TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; KEGG: cph:Cpha266_0499 para-aminobenzoate synthase, subunit I
YP_002017446.1	KEGG: pvi:Cvib_1467 hypothetical protein
YP_002017447.1	KEGG: pvi:Cvib_1466 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein
YP_002017448.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cph:Cpha266_0502 NusB antitermination factor
YP_002017449.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pvi:Cvib_1463 haloacid dehalogenase domain protein hydrolase
YP_002017450.1	KEGG: gur:Gura_0825 hypothetical protein
YP_002017452.1	KEGG: cph:Cpha266_0505 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_002017453.1	PFAM: peptidase M50; KEGG: cph:Cpha266_0506 peptidase M50
YP_002017454.1	KEGG: cph:Cpha266_0507 cytochrome c
YP_002017455.1	PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cch:Cag_0114 elongator protein 3/MiaB/NifB
YP_002017456.1	KEGG: cph:Cpha266_0053 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases
YP_002017457.1	KEGG: cph:Cpha266_2644 hypothetical protein
YP_002017458.1	KEGG: scl:sce5011 hypothetical protein
YP_002017459.1	KEGG: cph:Cpha266_2650 hypothetical protein
YP_002017460.1	KEGG: cph:Cpha266_2649 lipopolysaccharide biosynthesis; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein
YP_002017461.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cph:Cpha266_2635 polysaccharide biosynthesis protein CapD
YP_002017462.1	PFAM: DNA polymerase beta domain protein region; KEGG: cch:Cag_1383 hypothetical protein
YP_002017463.1	KEGG: mmw:Mmwyl1_0818 hypothetical protein
YP_002017464.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pvi:Cvib_0616 ABC transporter related
YP_002017465.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: lic:LIC12176 UDP-glucose 4-epimerase
YP_002017466.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: lic:LIC12175 aminotransferase
YP_002017467.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: lic:LIC12174 acetyl transferase
YP_002017468.1	PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: syw:SYNW0448  N-acetylneuraminic acid synthetase
YP_002017469.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: syw:SYNW0449  N-acetylglucosamine-6-phosphate 2-epimerase
YP_002017470.1	PFAM: CBS domain containing protein; Nucleotidyl transferase; KEGG: tdn:Tmden_0598 nucleotidyl transferase
YP_002017471.1	KEGG: lpc:LPC_2544 LPS biosynthesis protein, PseA-like protein
YP_002017472.1	PFAM: histidine biosynthesis protein; KEGG: lpc:LPC_2543 imidazole glycerol phosphate synthase, cyclase subunit HisF
YP_002017473.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_002017474.1	PFAM: oxidoreductase domain protein; KEGG: pmf:P9303_01161 hypothetical protein
YP_002017475.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: dvl:Dvul_2588 N-acylneuraminate cytidylyltransferase
YP_002017476.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nwi:Nwi_2393 short-chain dehydrogenase/reductase SDR
YP_002017477.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: vvy:VV0322 acetyltransferase
YP_002017478.1	KEGG: aeh:Mlg_2331 hypothetical protein
YP_002017479.1	TIGRFAM: methyltransferase FkbM family; KEGG: ava:Ava_1043 methyltransferase FkbM
YP_002017480.1	KEGG: cph:Cpha266_2625 transposase
YP_002017481.1	KEGG: cph:Cpha266_2626 transposase
YP_002017482.1	KEGG: cau:Caur_2124 hypothetical protein
YP_002017483.1	PFAM: glycosyl transferase group 1; KEGG: bfr:BF2784  glycosyltransferase
YP_002017484.1	KEGG: dps:DPPB82 related to polysaccharide transport proteins
YP_002017486.1	KEGG: syn:slr2118 hypothetical protein
YP_002017487.1	PFAM: glycosyl transferase group 1; KEGG: sus:Acid_4655 glycosyl transferase, group 1
YP_002017488.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: gur:Gura_1672 polysaccharide biosynthesis protein CapD
YP_002017489.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: drm:Dred_3032 NAD-dependent epimerase/dehydratase
YP_002017490.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: gur:Gura_1696 UDP-N-acetylglucosamine 2-epimerase
YP_002017491.1	KEGG: bxe:Bxe_C1079  acetyltransferase
YP_002017492.1	KEGG: pna:Pnap_3182  acetyltransferase
YP_002017493.1	KEGG: mca:MCA1164 methyltransferase domain protein
YP_002017494.1	KEGG: ret:RHE_CH03209  methyltransferase
YP_002017495.1	PFAM: glycosyl transferase family 2; KEGG: bvu:BVU_2654 glycosyltransferase family 2
YP_002017496.1	PFAM: glycosyl transferase family 2; KEGG: rma:Rmag_0889 glycosyl transferase, family 2
YP_002017497.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cph:Cpha266_2616 NAD-dependent epimerase/dehydratase
YP_002017498.1	PFAM: sugar transferase; KEGG: cph:Cpha266_2615 sugar transferase
YP_002017499.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: cph:Cpha266_2610 NAD-dependent epimerase/dehydratase
YP_002017500.1	TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: cph:Cpha266_2608 GDP-mannose 4,6-dehydratase
YP_002017501.1	KEGG: cph:Cpha266_2607  acetyltransferase
YP_002017502.1	PFAM: glycosyl transferase group 1; KEGG: eba:ebA5893 predicted glycosyltransferase
YP_002017503.1	PFAM: sugar transferase; KEGG: rrs:RoseRS_4262 undecaprenyl-phosphate galactose phosphotransferase
YP_002017504.1	KEGG: pat:Patl_3073 hypothetical protein
YP_002017505.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pat:Patl_3072 hypothetical protein
YP_002017506.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: pat:Patl_3071 short-chain dehydrogenase/reductase SDR
YP_002017507.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: bxe:Bxe_A2414  O-acyltransferase, CysE/LacA/LpxA/NodL family
YP_002017508.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: rme:Rmet_2724 DegT/DnrJ/EryC1/StrS aminotransferase
YP_002017509.1	KEGG: hch:HCH_03424 hypothetical protein
YP_002017510.1	KEGG: tbd:Tbd_1792 hypothetical protein
YP_002017511.1	KEGG: cte:CT0711 hypothetical protein
YP_002017512.1	KEGG: cte:CT0711 hypothetical protein
YP_002017513.1	KEGG: noc:Noc_0212 protein of unknown function DUF1555
YP_002017514.1	KEGG: pol:Bpro_1359 hypothetical protein
YP_002017515.1	KEGG: cch:Cag_0645 hypothetical protein
YP_002017516.1	TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: cph:Cpha266_2608 GDP-mannose 4,6-dehydratase
YP_002017517.1	KEGG: cph:Cpha266_2602 hypothetical protein
YP_002017518.1	KEGG: cph:Cpha266_2601 hypothetical protein
YP_002017519.1	PFAM: helix-turn-helix domain protein; KEGG: cch:Cag_0084 transcriptional regulator, XRE family
YP_002017520.1	KEGG: cch:Cag_1240 hypothetical protein
YP_002017521.1	KEGG: cch:Cag_1240 hypothetical protein
YP_002017522.1	KEGG: cch:Cag_1091 hypothetical protein
YP_002017523.1	KEGG: cch:Cag_1240 hypothetical protein
YP_002017524.1	PFAM: helix-turn-helix domain protein; KEGG: cch:Cag_0084 transcriptional regulator, XRE family
YP_002017525.1	PFAM: transposase IS4 family protein; KEGG: cph:Cpha266_0352 transposase, IS4 family protein
YP_002017526.1	SMART: helix-turn-helix domain protein; KEGG: mmw:Mmwyl1_3898 helix-turn-helix domain protein
YP_002017527.1	KEGG: cph:Cpha266_2604 hypothetical protein
YP_002017528.1	PFAM: PilT protein domain protein; KEGG: cch:Cag_1292 hypothetical protein
YP_002017531.1	PFAM: legume lectin beta domain; KEGG: dar:Daro_1504 legume lectin, beta domain:protein of unknown function DUF1555
YP_002017532.1	KEGG: nar:Saro_0424 hypothetical protein
YP_002017533.1	KEGG: cph:Cpha266_1384 transposase family protein
YP_002017534.1	KEGG: cch:Cag_1091 hypothetical protein
YP_002017535.1	KEGG: cch:Cag_1240 hypothetical protein
YP_002017536.1	KEGG: cch:Cag_0661 hypothetical protein
YP_002017538.1	KEGG: cch:Cag_0684 hypothetical protein
YP_002017540.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: cte:CT0227 UDP-glucose/GDP-mannose dehydrogenase family protein
YP_002017541.1	KEGG: cph:Cpha266_2183 hypothetical protein
YP_002017542.1	PFAM: protein of unknown function DUF218; KEGG: cte:CT0624 hypothetical protein
YP_002017543.1	PFAM: KOW domain protein; NGN domain protein; KEGG: cch:Cag_0149 NusG antitermination factor
YP_002017544.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cph:Cpha266_0514 major facilitator superfamily MFS_1
YP_002017545.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: plt:Plut_1662 excinuclease ABC, A subunit
YP_002017546.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_002017547.1	PFAM: inner-membrane translocator; KEGG: pvi:Cvib_1448 inner-membrane translocator
YP_002017548.1	TIGRFAM: outer membrane adhesin like proteiin; KEGG: cph:Cpha266_1846  outer membrane adhesin like proteiin
YP_002017549.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_1845 type I secretion outer membrane protein, TolC family
YP_002017550.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cph:Cpha266_1844 hypothetical protein
YP_002017551.1	PFAM: cyclic nucleotide-binding; ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_1843 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters
YP_002017552.1	PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_1842 secretion protein HlyD family protein
YP_002017553.1	PFAM: hypothetical protein-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1841 hypothetical protein-containing protein
YP_002017554.1	PFAM: glycosyl transferase family 2; KEGG: mrd:Mrad2831_1547 hypothetical protein
YP_002017555.1	KEGG: gfo:GFO_0545 hypothetical protein
YP_002017556.1	KEGG: sit:TM1040_1486 hypothetical protein
YP_002017557.1	PFAM: hypothetical protein-containing protein; Tetratricopeptide TPR_4; hypothetical protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1841 hypothetical protein-containing protein
YP_002017558.1	KEGG: cph:Cpha266_1326 pentapeptide repeat protein
YP_002017559.1	KEGG: cph:Cpha266_1326 pentapeptide repeat protein
YP_002017560.1	PFAM: isochorismatase hydrolase; KEGG: cph:Cpha266_0525 isochorismatase hydrolase
YP_002017561.1	KEGG: cch:Cag_0169 tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase
YP_002017562.1	PFAM: protein of unknown function DUF374; KEGG: cch:Cag_0170 hypothetical protein
YP_002017563.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_002017564.1	KEGG: cch:Cag_0172 hypothetical protein
YP_002017565.1	PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: cch:Cag_0173 carbamoyl-phosphate synthase, medium subunit
YP_002017566.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_002017567.1	PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; KEGG: cch:Cag_0175 ribulose-phosphate 3-epimerase
YP_002017568.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: cph:Cpha266_0533 surface antigen (D15)
YP_002017569.1	KEGG: plt:Plut_1647 hypothetical protein
YP_002017570.1	PFAM: Peptidase M23; KEGG: cph:Cpha266_0535 peptidase M23B
YP_002017571.1	KEGG: plt:Plut_1645 DNA polymerase A; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2
YP_002017572.1	PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cph:Cpha266_0537 prephenate dehydratase
YP_002017573.1	PFAM: protein of unknown function DUF28; KEGG: cch:Cag_0165 hypothetical protein
YP_002017574.1	KEGG: cph:Cpha266_0539 crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC
YP_002017575.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: plt:Plut_1641 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_002017576.1	catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis
YP_002017577.1	PFAM: inositol monophosphatase; KEGG: cph:Cpha266_0543 inositol-phosphate phosphatase
YP_002017578.1	PFAM: TspO/MBR family protein; KEGG: cph:Cpha266_0544 TspO and MBR like proteins
YP_002017579.1	KEGG: cph:Cpha266_0064 hypothetical protein
YP_002017580.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_002017581.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_002017582.1	KEGG: cch:Cag_1689 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_002017583.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_002017584.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: plt:Plut_1633 hypothetical protein
YP_002017585.1	KEGG: plt:Plut_1632 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_002017586.1	KEGG: cch:Cag_1704 peptidase S49, protease IV; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49
YP_002017587.1	KEGG: cph:Cpha266_0557 hypothetical protein
YP_002017588.1	KEGG: cch:Cag_1757 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002017589.1	PFAM: acyltransferase 3; KEGG: abo:ABO_0912 acetyltransferase
YP_002017590.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cph:Cpha266_0073 DNA methylase N-4/N-6 domain protein
YP_002017591.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: sfu:Sfum_2797 DNA-cytosine methyltransferase
YP_002017592.1	SMART: HNH nuclease; KEGG: sfu:Sfum_2799 HNH endonuclease
YP_002017593.1	KEGG: cbd:COXBU7E912_0654 hypothetical protein
YP_002017594.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: cbs:COXBURSA331_A0759 prevent-host-death family protein
YP_002017595.1	PFAM: phosphoenolpyruvate carboxylase; KEGG: cph:Cpha266_0559 phosphoenolpyruvate carboxylase
YP_002017596.1	KEGG: pvi:Cvib_1418 photosystem P840 reaction center cytochrome c-551
YP_002017597.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_002017598.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_0562 methyltransferase type 12
YP_002017599.1	KEGG: cph:Cpha266_0563 hypothetical protein
YP_002017600.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cch:Cag_1762 site-specific recombinase, phage/XerD family
YP_002017601.1	KEGG: cph:Cpha266_0565 hypothetical protein
YP_002017602.1	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system
YP_002017603.1	PFAM: extracellular solute-binding protein family 5; KEGG: cph:Cpha266_0567 extracellular solute-binding protein, family 5
YP_002017604.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: plt:Plut_1620 peptide ABC transporter, permease
YP_002017605.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_002017606.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_0570 hypothetical protein
YP_002017607.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cph:Cpha266_0571 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_002017608.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cch:Cag_1731 RNA methyltransferase TrmH, group 3
YP_002017609.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_002017610.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein
YP_002017611.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_002017612.1	KEGG: plt:Plut_2011 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002017613.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: cph:Cpha266_0576 DNA repair protein RecN
YP_002017614.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: cph:Cpha266_0577 twin-arginine translocation protein, TatA/E family subunit
YP_002017615.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
YP_002017616.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: cch:Cag_1746 MesJ protein
YP_002017617.1	KEGG: cph:Cpha266_0580 hypothetical protein
YP_002017618.1	PFAM: ribonuclease H; KEGG: cph:Cpha266_0581 ribonuclease H
YP_002017619.1	required for 70S ribosome assembly
YP_002017620.1	TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cph:Cpha266_0583 bacteriochlorophyll/chlorophyll a synthase
YP_002017621.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_002017622.1	PFAM: creatinase; peptidase M24; KEGG: cph:Cpha266_0585 peptidase M24
YP_002017623.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: cph:Cpha266_0586 CutA1 divalent ion tolerance protein
YP_002017624.1	KEGG: dde:Dde_1416 hypothetical protein
YP_002017625.1	KEGG: cph:Cpha266_2243 hypothetical protein
YP_002017626.1	PFAM: Hemolysin-type calcium-binding region; Cadherin; KEGG: mmr:Mmar10_1504 cadherin
YP_002017627.1	KEGG: cph:Cpha266_0587 DNA-directed DNA polymerase
YP_002017628.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_002017629.1	PFAM: phosphofructokinase; KEGG: cch:Cag_1780 phosphofructokinase
YP_002017630.1	PFAM: protein of unknown function DUF214; KEGG: cch:Cag_1781 lipoprotein releasing system
YP_002017631.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
YP_002017632.1	KEGG: cph:Cpha266_0592 hypothetical protein
YP_002017633.1	TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: cch:Cag_1783 dihydroorotate dehydrogenase 1
YP_002017634.1	KEGG: pvi:Cvib_1386 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_002017635.1	PFAM: metallophosphoesterase; KEGG: plt:Plut_1594 hypothetical protein
YP_002017636.1	KEGG: plt:Plut_1593 hypothetical protein
YP_002017637.1	PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: cph:Cpha266_0599 carbamoyl-phosphate synthase large subunit
YP_002017638.1	KEGG: cph:Cpha266_0600 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II
YP_002017639.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_002017640.1	KEGG: cph:Cpha266_0602 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein
YP_002017641.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: cte:CT1586 MotA/TolQ/ExbB proton channel family protein
YP_002017642.1	KEGG: cph:Cpha266_0604 hypothetical protein
YP_002017643.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cph:Cpha266_0605 biopolymer transport protein ExbD/TolR
YP_002017644.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: plt:Plut_1585 TonB-like
YP_002017645.1	KEGG: cph:Cpha266_0608 hypothetical protein
YP_002017646.1	catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
YP_002017647.1	PFAM: metallophosphoesterase; protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_1893 protein of unknown function DUF323
YP_002017648.1	KEGG: cph:Cpha266_0610 hypothetical protein
YP_002017649.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cph:Cpha266_0611 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002017650.1	PFAM: protein of unknown function DUF985; KEGG: cch:Cag_0287 hypothetical protein
YP_002017651.1	KEGG: pvi:Cvib_1371 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_002017652.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_002017653.1	KEGG: bxe:Bxe_B0298  phage resistance protein
YP_002017654.1	KEGG: mfa:Mfla_1215 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases
YP_002017655.1	KEGG: sbl:Sbal_3718 protein of unknown function DUF1016
YP_002017656.1	PFAM: restriction modification system DNA specificity domain; KEGG: vei:Veis_3549 restriction modification system DNA specificity domain
YP_002017657.1	KEGG: dac:Daci_2437 hypothetical protein
YP_002017658.1	KEGG: dac:Daci_2436 hypothetical protein
YP_002017659.1	KEGG: cch:Cag_1388 hypothetical protein
YP_002017660.1	KEGG: cch:Cag_1091 hypothetical protein
YP_002017661.1	TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: vei:Veis_3546 type I restriction-modification system, M subunit
YP_002017662.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: dol:Dole_2718 Sel1 domain protein repeat-containing protein
YP_002017664.1	TIGRFAM: prevent-host-death family protein; KEGG: lic:LIC12712 hypothetical protein
YP_002017665.1	KEGG: swo:Swol_2490 hypothetical protein
YP_002017666.1	KEGG: ajs:Ajs_3020 hypothetical protein
YP_002017667.1	PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_0017 transcriptional regulator, TetR family
YP_002017668.1	KEGG: cph:Cpha266_0062 NADPH-dependent FMN reductase
YP_002017669.1	PFAM: protein of unknown function DUF1703; KEGG: cch:Cag_0755 hypothetical protein
YP_002017670.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: lipolytic protein G-D-S-L family; Autotransporter beta- domain protein; KEGG: rpe:RPE_3830 outer membrane autotransporter barrel domain
YP_002017671.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cph:Cpha266_0615 oxidoreductase domain protein
YP_002017672.1	PFAM: small multidrug resistance protein; KEGG: cch:Cag_0283 SugE protein
YP_002017673.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_0618 ABC transporter related
YP_002017675.1	KEGG: cph:Cpha266_1359 hypothetical protein
YP_002017677.1	PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0620 outer membrane efflux protein
YP_002017678.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cph:Cpha266_0621 efflux transporter, RND family, MFP subunit
YP_002017679.1	PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: cph:Cpha266_0622 ABC transporter related
YP_002017680.1	KEGG: cph:Cpha266_1944 Legionella vir region protein
YP_002017681.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_0508 methyltransferase type 12
YP_002017682.1	KEGG: sfu:Sfum_1855 amidohydrolase 2
YP_002017683.1	PFAM: heat shock protein Hsp20; KEGG: pvi:Cvib_0315 heat shock protein HSP20
YP_002017684.1	KEGG: cph:Cpha266_0991 hypothetical protein
YP_002017685.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_002017686.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pvi:Cvib_0554 tRNA-adenosine deaminase
YP_002017687.1	KEGG: pvi:Cvib_0555 hypothetical protein
YP_002017688.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: pvi:Cvib_0556 2-nitropropane dioxygenase, NPD
YP_002017689.1	2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
YP_002017690.1	PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: plt:Plut_0502 glutamate synthase (ferredoxin)
YP_002017691.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_002017692.1	KEGG: plt:Plut_0504 hypothetical protein
YP_002017693.1	binds and unfolds substrates as part of the ClpXP protease
YP_002017694.1	PFAM: metallophosphoesterase; KEGG: plt:Plut_0506 Ser/Thr protein phosphatase family protein
YP_002017695.1	KEGG: plt:Plut_0507 hypothetical protein
YP_002017696.1	PFAM: Domain of unknown function DUF1814; KEGG: plt:Plut_0508 hypothetical protein
YP_002017697.1	KEGG: cph:Cpha266_0655 hypothetical protein
YP_002017698.1	PFAM: DNA primase small subunit; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: dde:Dde_2493 DEAD/DEAH box helicase-like
YP_002017699.1	PFAM: protein of unknown function DUF891; KEGG: cph:Cpha266_0649 protein of unknown function DUF891
YP_002017700.1	PFAM: helix-turn-helix domain protein; KEGG: cph:Cpha266_0650 transcriptional regulator, XRE family
YP_002017701.1	KEGG: mmw:Mmwyl1_0848 hypothetical protein
YP_002017702.1	KEGG: gbe:GbCGDNIH1_1764 general secretion pathway protein N
YP_002017705.1	PFAM: Flp/Fap pilin component; KEGG: pvi:Cvib_0571 Flp/Fap pilin component
YP_002017706.1	TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: pvi:Cvib_0570 SAF domain
YP_002017707.1	PFAM: type II and III secretion system protein; transport-associated; KEGG: pvi:Cvib_0569 type II and III secretion system protein
YP_002017708.1	PFAM: TadE family protein; KEGG: pvi:Cvib_0568 TadE family protein
YP_002017709.1	KEGG: pvi:Cvib_0567 hypothetical protein
YP_002017710.1	KEGG: plt:Plut_0656 Flp pilus assembly protein ATPase CpaE-like
YP_002017711.1	PFAM: type II secretion system protein E; KEGG: pvi:Cvib_0565 type II secretion system protein E
YP_002017712.1	PFAM: type II secretion system protein; KEGG: pvi:Cvib_0564 type II secretion system protein
YP_002017713.1	PFAM: type II secretion system protein; KEGG: plt:Plut_0793 TadC protein
YP_002017714.1	PFAM: peptidase A24A prepilin type IV; KEGG: pvi:Cvib_0562 peptidase A24A, prepilin type IV
YP_002017715.1	PFAM: radical SAM protein; KEGG: cte:CT1749 MoaA/NifB/PqqE family protein
YP_002017716.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cte:CT1748 methlytransferase, UbiE/COQ5 family
YP_002017717.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; KEGG: cph:Cpha266_0468 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit
YP_002017718.1	KEGG: cch:Cag_1922 sulfur oxidation protein SoxX
YP_002017719.1	KEGG: cch:Cag_1923 twin-arginine translocation pathway signal
YP_002017720.1	PFAM: Sulphur oxidation protein SoxZ; KEGG: cch:Cag_1924 sulfur oxidation protein SoxZ
YP_002017721.1	KEGG: cch:Cag_1925 sulfur oxidation protein SoxA
YP_002017722.1	KEGG: cch:Cag_1926 hypothetical protein
YP_002017723.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cch:Cag_1927 twin-arginine translocation pathway signal
YP_002017724.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cch:Cag_1928 thiol:disulfide interchange protein, thioredoxin family
YP_002017725.1	PFAM: Rubrerythrin; KEGG: cte:CT1327 rubrerythrin
YP_002017726.1	KEGG: cph:Cpha266_2642 hypothetical protein
YP_002017727.1	KEGG: cph:Cpha266_0697 ABC transporter, transmembrane region, type 1; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase
YP_002017728.1	KEGG: cph:Cpha266_0698 ABC transporter, transmembrane region, type 1; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_002017732.1	KEGG: cph:Cpha266_2641 hypothetical protein
YP_002017733.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_002017734.1	KEGG: cph:Cpha266_1942 hypothetical protein
YP_002017735.1	PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1299 dihydrolipoamide acetyltransferase
YP_002017736.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: plt:Plut_0538 hypothetical protein
YP_002017737.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: plt:Plut_0539 excinuclease ABC, A subunit
YP_002017738.1	KEGG: pvi:Cvib_0584 hypothetical protein
YP_002017739.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_002017740.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_002017741.1	KEGG: cch:Cag_0574 hypothetical protein
YP_002017742.1	PFAM: plasmid stabilization system; KEGG: cch:Cag_0575 hypothetical protein
YP_002017744.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: cph:Cpha266_1935 ExsB protein
YP_002017745.1	PFAM: Abortive infection protein; KEGG: cph:Cpha266_1934 abortive infection protein
YP_002017746.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_002017747.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1932 glycosyl transferase, family 2
YP_002017748.1	PFAM: cyclase/dehydrase; KEGG: cte:CT1061 hypothetical protein
YP_002017749.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: cph:Cpha266_1931 NAD-dependent epimerase/dehydratase
YP_002017750.1	KEGG: mfa:Mfla_1836 hypothetical protein
YP_002017751.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cph:Cpha266_0745 cation diffusion facilitator family transporter
YP_002017752.1	PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_0799 glycosyl transferase, group 1
YP_002017753.1	KEGG: cch:Cag_1290 cell shape determining protein MreB/Mrl; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; SMART: actin/actin family protein
YP_002017754.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_002017755.1	TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: pvi:Cvib_0597 queuosine biosynthesis protein
YP_002017756.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_002017757.1	KEGG: rno:685126 hypothetical protein LOC685126
YP_002017758.1	PFAM: Auxin Efflux Carrier; KEGG: cph:Cpha266_0806 auxin efflux carrier
YP_002017759.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_002017760.1	PFAM: Peptidase M23; KEGG: cch:Cag_1281 membrane-bound metallopeptidase-like
YP_002017761.1	KEGG: plt:Plut_0563 hypothetical protein
YP_002017762.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_002017763.1	KEGG: plt:Plut_0565 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_002017764.1	PFAM: hypothetical protein; KEGG: cph:Cpha266_0812 DedA family protein
YP_002017765.1	PvlArgDC; converts arginine to agmatine and carbon dioxide; has a role in polyamine metabolism; in Methanococcus jannaschii this enzyme self-cleaves at serine-serine bond to form alpha (N-terminal) and beta (C-terminal) subunits; the alpha subunit contains a catalytically active pyruvoyl group; the beta subunit contains the substrate-binding residues; forms homotrimers of the alpha/beta complex
YP_002017766.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_002017767.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_002017768.1	PFAM: FAD linked oxidase domain protein; KEGG: pvi:Cvib_1206 D-lactate dehydrogenase (cytochrome)
YP_002017769.1	KEGG: cph:Cpha266_0817 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_002017770.1	KEGG: plt:Plut_0572 hypothetical protein
YP_002017771.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_002017772.1	PFAM: chaperonin Cpn10; KEGG: cch:Cag_1167 chaperonin, 10 kDa
YP_002017773.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_002017774.1	KEGG: cph:Cpha266_0822 hypothetical protein
YP_002017775.1	PFAM: pentapeptide repeat protein; KEGG: cte:CT0572 pentapeptide repeat family protein
YP_002017776.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bcz:BCZK2940 3-oxoacyl-(acyl carrier protein) synthase III
YP_002017777.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: cph:Cpha266_1549 PAS/PAC sensor hybrid histidine kinase
YP_002017778.1	PFAM: Tail Collar domain protein; KEGG: ana:alr4706 unknown protein
YP_002017780.1	PFAM: glycoside hydrolase family 24; KEGG: cch:Cag_0702 probable phage-related lysozyme
YP_002017781.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_002017782.1	PFAM: radical SAM protein; KEGG: ppd:Ppro_1702 hydrolase, TatD family
YP_002017783.1	PFAM: homospermidine synthase; KEGG: mbn:Mboo_1047 homospermidine synthase
YP_002017784.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mbn:Mboo_1046 Orn/DAP/Arg decarboxylase 2
YP_002017785.1	PvlArgDC; converts arginine to agmatine and carbon dioxide; has a role in polyamine metabolism; in Methanococcus jannaschii this enzyme self-cleaves at serine-serine bond to form alpha (N-terminal) and beta (C-terminal) subunits; the alpha subunit contains a catalytically active pyruvoyl group; the beta subunit contains the substrate-binding residues; forms homotrimers of the alpha/beta complex
YP_002017786.1	PFAM: protein of unknown function DUF134; KEGG: cph:Cpha266_1458 protein of unknown function DUF134
YP_002017787.1	KEGG: gur:Gura_2736 hypothetical protein
YP_002017788.1	KEGG: gvi:gll2960 hypothetical protein
YP_002017789.1	KEGG: mhu:Mhun_0632 hypothetical protein
YP_002017790.1	KEGG: amt:Amet_0623 transposase, IS4
YP_002017791.1	KEGG: cph:Cpha266_1440 hypothetical protein
YP_002017792.1	KEGG: cch:Cag_0704 hypothetical protein
YP_002017793.1	PFAM: AAA-4 family protein; KEGG: gur:Gura_2922  transcriptional regulator
YP_002017794.1	KEGG: gur:Gura_2921 hypothetical protein
YP_002017795.1	KEGG: cph:Cpha266_1443 hypothetical protein
YP_002017796.1	KEGG: cch:Cag_0843 hypothetical protein
YP_002017799.1	KEGG: cch:Cag_0843 hypothetical protein
YP_002017800.1	KEGG: btr:Btr_1076 hypothetical protein
YP_002017801.1	KEGG: cch:Cag_0841 hypothetical protein
YP_002017802.1	TIGRFAM: addiction module antidote protein; KEGG: mar:MAE_47260 hypothetical protein
YP_002017803.1	TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: gme:Gmet_2533 protein of unknown function DUF891
YP_002017804.1	KEGG: cch:Cag_0839 hypothetical protein
YP_002017805.1	KEGG: cch:Cag_0838 hypothetical protein
YP_002017806.1	KEGG: rfe:RF_0889 hypothetical protein
YP_002017807.1	KEGG: mar:MAE_20750 hypothetical protein
YP_002017808.1	KEGG: cph:Cpha266_2115 ATPase
YP_002017809.1	KEGG: rpe:RPE_0295 hypothetical protein
YP_002017810.1	KEGG: syn:ssl3692 hypothetical protein
YP_002017811.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pvi:Cvib_1198 cell division ATP-binding protein FtsE
YP_002017812.1	KEGG: cph:Cpha266_1780 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_002017813.1	KEGG: pvi:Cvib_1196 hypothetical protein
YP_002017814.1	PFAM: Polysulphide reductase NrfD; KEGG: cch:Cag_0618 formate-dependent nitrite reductase membrane component-like
YP_002017815.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cch:Cag_0619 NrfC protein
YP_002017816.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cch:Cag_0620 twin-arginine translocation pathway signal
YP_002017817.1	KEGG: cph:Cpha266_1712 N-6 DNA methylase
YP_002017818.1	PFAM: protein of unknown function DUF497; KEGG: cte:CT0821 hypothetical protein
YP_002017819.1	KEGG: cph:Cpha266_2182 hypothetical protein
YP_002017820.1	KEGG: cph:Cpha266_1711 DNA-damage-inducible protein D
YP_002017821.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: cph:Cpha266_1068 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_002017822.1	PFAM: acid phosphatase (Class B); KEGG: cph:Cpha266_1069 acid phosphatase (class B)
YP_002017823.1	TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: cph:Cpha266_2430 alkylphosphonate utilization operon protein PhnA
YP_002017824.1	catalyzes the hydrolysis of acylphosphate
YP_002017825.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: plt:Plut_1551 cysteine synthase K/M/A
YP_002017826.1	PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: cph:Cpha266_1778 3-deoxy-D-manno-octulosonic-acid transferase domain protein
YP_002017827.1	KEGG: cph:Cpha266_1775 hypothetical protein
YP_002017828.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_1774 DEAD/DEAH box helicase domain protein
YP_002017829.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: plt:Plut_0588 metallo-beta-lactamase superfamily protein
YP_002017830.1	KEGG: cph:Cpha266_1771 hypothetical protein
YP_002017831.1	TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cph:Cpha266_1769 tyrosine recombinase XerD
YP_002017832.1	TIGRFAM: sun protein; transcription antitermination factor NusB; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: cph:Cpha266_1768 sun protein
YP_002017833.1	KEGG: cte:CT0604 O-acetylhomoserine (thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_002017834.1	KEGG: cph:Cpha266_1766 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold
YP_002017835.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002017836.1	PFAM: GatB/Yqey domain protein; KEGG: cph:Cpha266_1764 GatB/YqeY domain protein
YP_002017837.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_1763 short-chain dehydrogenase/reductase SDR
YP_002017838.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: cph:Cpha266_1762 cold-shock DNA-binding protein family
YP_002017839.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_002017840.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cph:Cpha266_1847 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
YP_002017842.1	KEGG: cph:Cpha266_1406 hypothetical protein
YP_002017843.1	PFAM: surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: pfl:PFL_1466 hemolysin activator protein, HlyB family
YP_002017844.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: cch:Cag_1512 filamentous haemagglutinin-like
YP_002017845.1	KEGG: cph:Cpha266_1806 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein
YP_002017846.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_002017847.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_002017848.1	KEGG: plt:Plut_1434 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit
YP_002017849.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: plt:Plut_1433 biotin carboxyl carrier protein
YP_002017850.1	KEGG: pvi:Cvib_1249 hypothetical protein
YP_002017851.1	PFAM: carboxyl transferase; KEGG: plt:Plut_1431 propionyl-CoA carboxylase beta chain
YP_002017852.1	KEGG: pvi:Cvib_1247 histidinol-phosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase
YP_002017853.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: cch:Cag_1514 uroporphyrinogen-III synthase
YP_002017854.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_002017855.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_002017856.1	PFAM: cytochrome c assembly protein; KEGG: plt:Plut_1425 HemX protein
YP_002017857.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: cph:Cpha266_1793 GTP-binding protein TypA
YP_002017858.1	PFAM: ferredoxin-dependent glutamate synthase; Rubredoxin-type Fe(Cys)4 protein; KEGG: cph:Cpha266_1570 glutamate synthase (NADPH) GltB2 subunit
YP_002017859.1	PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cph:Cpha266_1571 rubrerythrin
YP_002017860.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: pvi:Cvib_0086 helix-turn-helix, type 11 domain protein
YP_002017861.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: plt:Plut_0825  ribosylglycohydrolase
YP_002017862.1	KEGG: nme:NMB0252 hypothetical protein
YP_002017863.1	KEGG: azo:azo3723 hypothetical protein
YP_002017865.1	KEGG: dar:Daro_1651 hypothetical protein
YP_002017867.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pvi:Cvib_0153 RNA-directed DNA polymerase
YP_002017868.1	KEGG: cch:Cag_1342 hypothetical protein
YP_002017869.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: pvi:Cvib_0620 transposase, IS204/IS1001/IS1096/IS1165 family protein
YP_002017870.1	KEGG: pvi:Cvib_0081 hypothetical protein
YP_002017871.1	PFAM: Protein of unknown function DUF1790; KEGG: pvi:Cvib_0068 hypothetical protein
YP_002017872.1	KEGG: cch:Cag_0294 hypothetical protein
YP_002017873.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: dvu:DVU2042 Fic family protein
YP_002017874.1	KEGG: nwi:Nwi_3122 hypothetical protein
YP_002017876.1	KEGG: tdn:Tmden_0943 DNA-damage-inducible protein D
YP_002017877.1	SMART: helix-turn-helix domain protein; KEGG: plt:Plut_1042 transcriptional regulator, XRE family
YP_002017879.1	KEGG: cch:Cag_0858 hypothetical protein
YP_002017880.1	KEGG: cch:Cag_0400 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; Sigma-70 region 4 type 2
YP_002017881.1	TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cch:Cag_0401 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide
YP_002017882.1	PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: cch:Cag_0402 2-vinyl bacteriochlorophyllide hydratase
YP_002017883.1	PFAM: extracellular solute-binding protein family 5; KEGG: cph:Cpha266_1789 extracellular solute-binding protein, family 5
YP_002017884.1	PFAM: peptidase C1A papain; KEGG: mba:Mbar_A0734 cysteine protease (papain C1 family)
YP_002017885.1	PFAM: creatinase; peptidase M24; KEGG: cph:Cpha266_2518 peptidase M24
YP_002017886.1	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: pca:Pcar_1787 hypothetical protein
YP_002017887.1	PFAM: helix-turn-helix domain protein; KEGG: pca:Pcar_1786 helix-turn-helix transcriptional regulator
YP_002017888.1	PFAM: DinB family protein; KEGG: cte:CT1840 hypothetical protein
YP_002017889.1	KEGG: pna:Pnap_4866 hypothetical protein
YP_002017890.1	KEGG: pvi:Cvib_1272 helicase, RecD/TraA family; TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding class 1; AAA ATPase
YP_002017891.1	PFAM: PUCC protein; KEGG: cte:CT1441 PucC protein
YP_002017892.1	PFAM: radical SAM protein; KEGG: cch:Cag_0688 MoaA/NifB/PqqE family protein
YP_002017893.1	KEGG: cch:Cag_1146 hypothetical protein
YP_002017894.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cch:Cag_0439 periplasmic sensor signal transduction histidine kinase
YP_002017895.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cph:Cpha266_1205 two component transcriptional regulator, winged helix family
YP_002017896.1	KEGG: cch:Cag_0441 hypothetical protein
YP_002017897.1	PFAM: protein of unknown function DUF344; KEGG: rfr:Rfer_4046 protein of unknown function DUF344
YP_002017898.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: cch:Cag_0277 Sel1-like repeat
YP_002017899.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_002017900.1	PFAM: acyltransferase 3; KEGG: plt:Plut_1385 hypothetical protein
YP_002017901.1	KEGG: plt:Plut_1384 hypothetical protein
YP_002017902.1	PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_1812 glycosyl transferase, group 1
YP_002017903.1	PFAM: radical SAM protein; KEGG: cph:Cpha266_1814 radical SAM protein
YP_002017904.1	KEGG: cph:Cpha266_1815 hypothetical protein
YP_002017905.1	KEGG: cph:Cpha266_1816 hypothetical protein
YP_002017906.1	KEGG: cph:Cpha266_1817 serine O-acetyltransferase
YP_002017907.1	PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_1818 glycosyl transferase, group 1
YP_002017908.1	KEGG: cph:Cpha266_1819 uncharacterized protein involved in exopolysaccharide biosynthesis-like
YP_002017909.1	PFAM: polysaccharide biosynthesis protein; KEGG: cph:Cpha266_0889 polysaccharide biosynthesis protein
YP_002017910.1	PFAM: glycosyl transferase family 8; KEGG: cph:Cpha266_1821 glycosyl transferase, family 8
YP_002017911.1	PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_1822 glycosyl transferase, group 1
YP_002017912.1	PFAM: polysaccharide export protein; KEGG: cph:Cpha266_1823 polysaccharide export protein
YP_002017913.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: cph:Cpha266_1824 serine O-acetyltransferase
YP_002017914.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1825 glycosyl transferase, family 2
YP_002017915.1	KEGG: cph:Cpha266_1826  anti-sigma regulatory factor, serine/threonine protein kinase
YP_002017916.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: plt:Plut_1366 anti-anti-sigma regulatory factor, SpoIIAA
YP_002017917.1	KEGG: cph:Cpha266_1828 nucleoside-diphosphate-sugar pyrophosphorylase
YP_002017918.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cph:Cpha266_1829 anti-sigma-factor antagonist
YP_002017919.1	PFAM: sugar transferase; KEGG: cph:Cpha266_1830 undecaprenyl-phosphate galactose phosphotransferase
YP_002017920.1	KEGG: cph:Cpha266_1831 N-acetylmannosaminyltransferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF
YP_002017921.1	PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: cph:Cpha266_1832 sigma54 specific transcriptional regulator, Fis family
YP_002017922.1	KEGG: cph:Cpha266_1833  PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; Stage II sporulation E family protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein
YP_002017924.1	KEGG: cph:Cpha266_1906 hypothetical protein
YP_002017925.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: cph:Cpha266_1905 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002017926.1	catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate
YP_002017927.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cph:Cpha266_1903 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_002017928.1	PFAM: peptidase M48 Ste24p; KEGG: cph:Cpha266_1902 STE24 endopeptidase
YP_002017929.1	PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: cph:Cpha266_1901 porphyromonas-type peptidyl-arginine deiminase
YP_002017930.1	Catalyzes the reversible oxidation of malate to oxaloacetate
YP_002017931.1	involved in the peptidyltransferase reaction during translation
YP_002017932.1	PFAM: ribosomal protein L21; KEGG: plt:Plut_1508 50S ribosomal protein L21
YP_002017933.1	KEGG: cph:Cpha266_1897 hypothetical protein
YP_002017934.1	This protein performs the mismatch recognition step during the DNA repair process
YP_002017935.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_1895 radical SAM protein
YP_002017936.1	KEGG: cch:Cag_0858 hypothetical protein
YP_002017937.1	KEGG: sun:SUN_0701 hypothetical protein
YP_002017938.1	KEGG: rca:Rcas_0956 hypothetical protein
YP_002017939.1	PFAM: protein of unknown function DUF323; SMART: TIR protein; KEGG: cph:Cpha266_0902 protein of unknown function DUF323
YP_002017940.1	PFAM: transposase IS4 family protein; KEGG: amt:Amet_0623 transposase, IS4
YP_002017941.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: cch:Cag_0956 prevent-host-death protein
YP_002017942.1	PFAM: plasmid stabilization system; KEGG: cch:Cag_0957 hypothetical protein
YP_002017943.1	KEGG: cph:Cpha266_1892 HAD-superfamily hydrolase, subfamily IA, variant 3
YP_002017944.1	PFAM: Class I peptide chain release factor; KEGG: cch:Cag_1326 hypothetical protein
YP_002017945.1	PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: stm:STM3529 glycerol dehydrogenase
YP_002017946.1	PFAM: metallophosphoesterase; protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_1893 protein of unknown function DUF323
YP_002017947.1	PFAM: PilT protein domain protein; KEGG: cch:Cag_1777 PIN (PilT N terminus) domain
YP_002017948.1	KEGG: cch:Cag_0858 hypothetical protein
YP_002017949.1	KEGG: bmu:Bmul_6243 hypothetical protein
YP_002017950.1	KEGG: rme:Rmet_6188 transposase Tn3
YP_002017951.1	PFAM: resolvase; KEGG: dsh:Dshi_4084 resolvase
YP_002017952.1	KEGG: cph:Cpha266_2057 hypothetical protein
YP_002017953.1	KEGG: cph:Cpha266_2056 hypothetical protein
YP_002017954.1	KEGG: plt:Plut_0829 Legionella vir region protein
YP_002017955.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_1327 ATPase
YP_002017956.1	PFAM: regulatory protein MerR; KEGG: cph:Cpha266_1889 transcriptional regulator, MerR family
YP_002017957.1	PFAM: bacteriochlorophyll A protein; KEGG: plt:Plut_1500 bacteriochlorophyll A protein
YP_002017958.1	TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cph:Cpha266_1887 apolipoprotein N-acyltransferase
YP_002017959.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: cph:Cpha266_1886 sigma54 specific transcriptional regulator, Fis family
YP_002017960.1	PFAM: Sporulation domain protein; KEGG: plt:Plut_1497 hypothetical protein
YP_002017961.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_002017962.1	KEGG: rme:Rmet_3677 histone-like nucleoid-structuring protein H-NS
YP_002017964.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pvi:Cvib_1320 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_002017965.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cph:Cpha266_1882 xanthine/uracil/vitamin C permease
YP_002017966.1	KEGG: cau:Caur_0486 protein kinase
YP_002017967.1	PFAM: Forkhead-associated protein; KEGG: bth:BT_2774  adenylate cyclase
YP_002017968.1	PFAM: Forkhead-associated protein; KEGG: bth:BT_2773 hypothetical protein
YP_002017969.1	PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: bth:BT_2772  protein phosphatase
YP_002017970.1	KEGG: cph:Cpha266_1383 hypothetical protein
YP_002017971.1	KEGG: cph:Cpha266_1384 transposase family protein
YP_002017972.1	PFAM: protein of unknown function DUF805; KEGG: mlo:mlr4844 hypothetical protein
YP_002017973.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pvi:Cvib_0153 RNA-directed DNA polymerase
YP_002017974.1	PFAM: tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: bth:BT_2769  serine/threonine-protein kinase PknB
YP_002017975.1	PFAM: Serine/threonine protein kinase-related; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bth:BT_2769  serine/threonine-protein kinase PknB
YP_002017976.1	PFAM: protein of unknown function DUF323; KEGG: cph:Cpha266_0902 protein of unknown function DUF323
YP_002017977.1	KEGG: pin:Ping_1761 hypothetical protein
YP_002017978.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cch:Cag_0700 thiolredoxin peroxidase
YP_002017979.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_002017980.1	KEGG: cph:Cpha266_1876 hypothetical protein
YP_002017981.1	TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; Methyltransferase type 11; KEGG: pvi:Cvib_1315 modification methylase, HemK family
YP_002017982.1	TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: plt:Plut_1489 negative regulator of class I heat shock protein
YP_002017983.1	PFAM: GrpE protein; KEGG: cch:Cag_1423 molecular chaperone GrpE (heat shock protein)-like
YP_002017984.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_002017985.1	PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: cph:Cpha266_1271 malate dehydrogenase (oxaloacetate-decarboxylating)
YP_002017986.1	KEGG: plt:Plut_1486 hypothetical protein
YP_002017987.1	KEGG: cch:Cag_1420 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_002017988.1	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cph:Cpha266_1869 UDP-N-acetylmuramate--L-alanine ligase
YP_002017989.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cch:Cag_0448 DegT/DnrJ/EryC1/StrS family protein
YP_002017990.1	PFAM: major facilitator superfamily MFS_1; KEGG: cch:Cag_0889 transporter
YP_002017991.1	PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_2528 alpha/beta hydrolase fold
YP_002017992.1	KEGG: cph:Cpha266_0092 virulence associated protein B
YP_002017993.1	KEGG: mar:MAE_20900 hypothetical protein
YP_002017994.1	KEGG: mar:MAE_20890 hypothetical protein
YP_002017995.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_1866 ABC transporter related
YP_002017996.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_002017997.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_002017998.1	PFAM: small multidrug resistance protein; KEGG: cph:Cpha266_1863 small multidrug resistance protein
YP_002017999.1	PFAM: UspA domain protein; sodium/hydrogen exchanger; KEGG: cph:Cpha266_1862 sodium/hydrogen exchanger
YP_002018000.1	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; protein of unknown function DUF1568; KEGG: cph:Cpha266_1487 protein of unknown function DUF1568
YP_002018001.1	PFAM: Curli production assembly/transport component CsgG; KEGG: cph:Cpha266_1717 curli production assembly/transport component CsgG
YP_002018002.1	PFAM: NUDIX hydrolase; KEGG: cph:Cpha266_0513 NUDIX hydrolase
YP_002018003.1	KEGG: hch:HCH_04190 hypothetical protein
YP_002018004.1	PFAM: GTPase EngC; KEGG: cph:Cpha266_1597 GTPase EngC
YP_002018005.1	PFAM: penicillin-binding protein transpeptidase; KEGG: cph:Cpha266_1596 beta-lactamase
YP_002018006.1	KEGG: cch:Cag_1210 hypothetical protein
YP_002018007.1	PFAM: UbiA prenyltransferase; KEGG: cph:Cpha266_1569 UbiA prenyltransferase
YP_002018008.1	PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; KEGG: fps:FP1904  muramidase
YP_002018009.1	KEGG: cph:Cpha266_1975 hypothetical protein
YP_002018010.1	KEGG: cph:Cpha266_1071 hypothetical protein
YP_002018011.1	KEGG: ppd:Ppro_1338 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_002018012.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: plt:Plut_0805 AraC family transcripiotnal regulator
YP_002018013.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: cph:Cpha266_1564 efflux transporter, RND family, MFP subunit
YP_002018014.1	PFAM: acriflavin resistance protein; KEGG: cte:CT1287 multidrug resistance protein, AcrB/AcrD family
YP_002018015.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: plt:Plut_0808 RND efflux system, outer membrane lipoprotein, NodT
YP_002018016.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pvi:Cvib_0735 oxidoreductase FAD/NAD(P)-binding domain protein
YP_002018017.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: tet:TTHERM_00778410 SLEI family protein Pfam: TPR_2 TPR_1 Sel1 Bin3 DUF627 TPR_3 PUB HHA PPR Mad3_BUB1_I VAR1 PLU-1 Mg296 FAT MIT PROSITE: TPR TPR_REGION
YP_002018018.1	PFAM: protein of unknown function DUF159; KEGG: cph:Cpha266_1054 protein of unknown function DUF159
YP_002018019.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_0633 helicase domain protein
YP_002018020.1	PFAM: AAA-4 family protein; KEGG: cch:Cag_1221  transcriptional regulator
YP_002018021.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: aeh:Mlg_2299 cobyrinic acid a,c-diamide synthase
YP_002018022.1	PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: cte:CT0906 DNA-dependent ATPase, SNF2 family protein
YP_002018023.1	KEGG: cte:CT0907 hypothetical protein
YP_002018024.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bpt:Bpet4236 type III restriction system methylase
YP_002018025.1	PFAM: protein of unknown function DUF1016; KEGG: amr:AM1_2231 hypothetical protein
YP_002018026.1	KEGG: cte:CT0911 type III restriction system endonuclease
YP_002018028.1	KEGG: eba:ebA5228 hypothetical protein
YP_002018029.1	KEGG: eba:ebA5226 hypothetical protein
YP_002018032.1	PFAM: protein of unknown function DUF255; KEGG: cph:Cpha266_1460 protein of unknown function DUF255
YP_002018033.1	this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae
YP_002018034.1	alkyl hydroperoxidase; catalyze the reduction of hydrogen peroxide to water and the reduction of alkyl hydroperoxides to the corresponding alcohols
YP_002018035.1	PFAM: conserved hypothetical protein; KEGG: pvi:Cvib_0743 conserved hypothetical protein 730
YP_002018036.1	PFAM: glycosyl transferase family 2; KEGG: cch:Cag_1106 glycosyl transferase
YP_002018037.1	TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cph:Cpha266_1449 bacteriochlorophyll/chlorophyll a synthase
YP_002018038.1	KEGG: cph:Cpha266_1423 hypothetical protein
YP_002018039.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cte:CT1267 amino acid efflux protein
YP_002018040.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: cch:Cag_1081 D-alanyl-D-alanine carboxypeptidase
YP_002018041.1	PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: cte:CT1263 hypothetical protein
YP_002018042.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: plt:Plut_1216 ferredoxin, 4Fe-4S
YP_002018043.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: plt:Plut_1215 ferredoxin, 4Fe-4S
YP_002018044.1	PFAM: PhoH family protein; KEGG: cch:Cag_1083 PhoH family protein
YP_002018045.1	TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: cch:Cag_1084 ADP-L-glycero-D-manno-heptose-6-epimerase
YP_002018046.1	KEGG: cph:Cpha266_1549 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002018047.1	KEGG: plt:Plut_1207 sigma-24 (FecI-like)
YP_002018048.1	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: pvi:Cvib_0754 histidinol phosphate aminotransferase
YP_002018049.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cph:Cpha266_1411 tRNA/rRNA methyltransferase (SpoU)
YP_002018050.1	PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_1410 alpha/beta hydrolase fold
YP_002018051.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_002018052.1	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient
YP_002018053.1	PFAM: pentapeptide repeat protein; KEGG: cph:Cpha266_1984 pentapeptide repeat protein
YP_002018054.1	KEGG: cre:CHLREDRAFT_190319 hypothetical protein Pfam: Dioxygenase_C PROSITE: ALA_RICH
YP_002018055.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: cch:Cag_1059 hypothetical protein
YP_002018056.1	PFAM: band 7 protein; KEGG: cch:Cag_1233 band 7 protein
YP_002018057.1	PFAM: UspA domain protein; KEGG: pvi:Cvib_1041 UspA domain protein
YP_002018058.1	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins
YP_002018059.1	MDM; functions in conversion of succinate to propionate
YP_002018060.1	PFAM: methylmalonyl-CoA mutase; KEGG: cph:Cpha266_1165 methylmalonyl-CoA mutase
YP_002018061.1	KEGG: cph:Cpha266_1166 acetyl-CoA carboxylase alpha subunit-like
YP_002018062.1	TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cph:Cpha266_1167 methylmalonyl-CoA epimerase
YP_002018063.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cch:Cag_1125 propionate--CoA ligase
YP_002018064.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_002018065.1	PFAM: transketolase; transketolase; KEGG: cch:Cag_1192 transketolase-like
YP_002018066.1	PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1171 conserved hypothetical protein 103
YP_002018067.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_002018068.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cph:Cpha266_1173 zeta-carotene desaturase
YP_002018069.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: GAF domain protein; KEGG: plt:Plut_1394 GAF sensor signal transduction histidine kinase
YP_002018070.1	PFAM: NADPH-dependent FMN reductase; KEGG: cph:Cpha266_1959 NADPH-dependent FMN reductase
YP_002018071.1	KEGG: ppd:Ppro_1116 transcriptional regulator, CopG family
YP_002018072.1	PFAM: plasmid stabilization system; KEGG: ppd:Ppro_1115 addiction module toxin, RelE/StbE family
YP_002018073.1	KEGG: fjo:Fjoh_3045 natural resistance-associated macrophage protein
YP_002018074.1	KEGG: sat:SYN_02218 cation transport ATPase
YP_002018075.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: fjo:Fjoh_0242 Mg2+ transporter protein, CorA family protein
YP_002018076.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cph:Cpha266_1021 endonuclease/exonuclease/phosphatase
YP_002018077.1	KEGG: cph:Cpha266_1020 hypothetical protein
YP_002018078.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_002018079.1	PFAM: hypothetical protein; KEGG: cph:Cpha266_1018 DedA family protein
YP_002018080.1	PFAM: transketolase; KEGG: cph:Cpha266_1017 transketolase subunit A
YP_002018081.1	PFAM: Protein of unknown function methylase KEGG: cph:Cpha266_1016 conserved hypothetical protein 95
YP_002018082.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_002018083.1	PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: cph:Cpha266_1014 aminotransferase
YP_002018084.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: cph:Cpha266_1013 phospholipid/glycerol acyltransferase
YP_002018085.1	PFAM: PSP1 domain protein; KEGG: cph:Cpha266_1012 PSP1 domain protein
YP_002018086.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_002018087.1	PFAM: conserved hypothetical protein; KEGG: cch:Cag_1396 hypothetical protein
YP_002018088.1	catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge
YP_002018089.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cch:Cag_1395 anti-anti-sigma factor
YP_002018090.1	KEGG: cte:CT0973 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_002018091.1	KEGG: cph:Cpha266_1549 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002018092.1	PFAM: membrane protein of unknown function; KEGG: cph:Cpha266_0995 membrane protein of unknown function
YP_002018093.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_002018094.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_002018095.1	KEGG: cph:Cpha266_1548 hypothetical protein
YP_002018096.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: cch:Cag_0781 sigma-54 factor
YP_002018097.1	heat shock protein involved in degradation of misfolded proteins
YP_002018098.1	heat shock protein involved in degradation of misfolded proteins
YP_002018099.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_002018100.1	PFAM: DoxX family protein; KEGG: cph:Cpha266_1543 DoxX family protein
YP_002018101.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_002018102.1	PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: cch:Cag_0722 HDIG
YP_002018103.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cch:Cag_0723 oxidoreductase, Gfo/Idh/MocA family
YP_002018104.1	PFAM: major facilitator superfamily MFS_1; KEGG: plt:Plut_1149 drug resistance protein
YP_002018105.1	PFAM: periplasmic binding protein; KEGG: plt:Plut_1148 ABC transporter, periplasmic substrate-binding protein
YP_002018106.1	PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: spc:Sputcn32_3523 protein of unknown function DUF450
YP_002018107.1	PFAM: N-6 DNA methylase; KEGG: spc:Sputcn32_3524 N-6 DNA methylase
YP_002018108.1	KEGG: spc:Sputcn32_3525 restriction modification system DNA specificity domain
YP_002018109.1	PFAM: pentapeptide repeat protein; SMART: TIR protein; KEGG: cte:CT1045 pentapeptide repeat family protein
YP_002018111.1	PFAM: pentapeptide repeat protein; SMART: TIR protein; KEGG: cte:CT1045 pentapeptide repeat family protein
YP_002018112.1	KEGG: fjo:Fjoh_3614 hypothetical protein
YP_002018113.1	KEGG: fjo:Fjoh_3615 hypothetical protein
YP_002018114.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: cch:Cag_1311 hypothetical protein
YP_002018115.1	PFAM: protein of unknown function DUF1016; KEGG: ava:Ava_4169 protein of unknown function DUF1016
YP_002018116.1	PFAM: NUDIX hydrolase; KEGG: cch:Cag_0727 NUDIX/MutT family protein
YP_002018117.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: pmt:PMT0296 hypothetical protein
YP_002018118.1	PFAM: cyclase/dehydrase; KEGG: cte:CT0933 hypothetical protein
YP_002018119.1	TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: pvi:Cvib_0805 Na+/Pi-cotransporter
YP_002018120.1	KEGG: cph:Cpha266_2262 hypothetical protein
YP_002018121.1	KEGG: cph:Cpha266_2261 DnaK like protein
YP_002018122.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2260 AAA ATPase, central domain protein
YP_002018123.1	PFAM: protein of unknown function DUF323; KEGG: cph:Cpha266_2259 protein of unknown function DUF323
YP_002018129.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: nwi:Nwi_3004 hypothetical protein protein
YP_002018130.1	KEGG: cph:Cpha266_2190 hypothetical protein
YP_002018131.1	KEGG: cph:Cpha266_2189 hypothetical protein
YP_002018132.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: pvi:Cvib_0620 transposase, IS204/IS1001/IS1096/IS1165 family protein
YP_002018133.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pvi:Cvib_0153 RNA-directed DNA polymerase
YP_002018134.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: hsm:HSM_1618 filamentation induced by cAMP protein Fic
YP_002018135.1	KEGG: cph:Cpha266_2183 hypothetical protein
YP_002018136.1	KEGG: hwa:HQ1527A methylglyoxal synthase
YP_002018137.1	PFAM: WD-40 repeat protein; KEGG: dar:Daro_3599 WD-40 repeat
YP_002018138.1	KEGG: cph:Cpha266_2190 hypothetical protein
YP_002018139.1	KEGG: cph:Cpha266_2183 hypothetical protein
YP_002018140.1	PFAM: protein of unknown function DUF477; KEGG: tde:TDE2528 hypothetical protein
YP_002018141.1	PFAM: protein of unknown function DUF477; KEGG: rpa:RPA1574 DUF477
YP_002018142.1	KEGG: cte:CT1305 hypothetical protein
YP_002018143.1	PFAM:  methyltransferase; KEGG: cph:Cpha266_1584  methyltransferase
YP_002018144.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cch:Cag_1014 TonB-dependent receptor-related protein
YP_002018145.1	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: cph:Cpha266_1116 cob(II)yrinic acid a,c-diamide reductase
YP_002018146.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_002018147.1	TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: cch:Cag_1011 L-threonine-O-3-phosphate decarboxylase
YP_002018148.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
YP_002018149.1	TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: cph:Cpha266_1120 cob(I)yrinic acid a,c-diamide adenosyltransferase
YP_002018150.1	PFAM: transport system permease; KEGG: cch:Cag_0754 FecCD transport family protein
YP_002018151.1	PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_1079 ATPase
YP_002018152.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cch:Cag_1076 hypothetical protein
YP_002018153.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: rms:RMA_0924  antitoxin of toxin-antitoxin
YP_002018154.1	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: cph:Cpha266_1376 addiction module toxin, RelE/StbE family
YP_002018155.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: cch:Cag_0888 alcohol dehydrogenase, iron-containing
YP_002018156.1	SMART: nuclear protein SET; KEGG: plt:Plut_1126 nuclear protein SET
YP_002018157.1	KEGG: cch:Cag_0867 hypothetical protein
YP_002018158.1	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cch:Cag_1078 transcriptional regulator, AbrB family
YP_002018159.1	KEGG: cch:Cag_1077 hypothetical protein
YP_002018160.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: wsu:WS0422 hypothetical protein
YP_002018161.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_1509 ABC transporter related
YP_002018162.1	PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1508 protein of unknown function DUF214
YP_002018163.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cph:Cpha266_1507 efflux transporter, RND family, MFP subunit
YP_002018164.1	PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: plt:Plut_1122 hypothetical protein
YP_002018165.1	KEGG: cph:Cpha266_1560 hypothetical protein
YP_002018166.1	KEGG: cph:Cpha266_1758 hypothetical protein
YP_002018167.1	KEGG: cph:Cpha266_1757 hypothetical protein
YP_002018168.1	KEGG: cph:Cpha266_1753 YapH protein
YP_002018169.1	KEGG: cph:Cpha266_1756 hypothetical protein
YP_002018170.1	KEGG: cph:Cpha266_1753 YapH protein
YP_002018171.1	KEGG: cph:Cpha266_2339 transposase, IS4 family protein
YP_002018172.1	KEGG: amt:Amet_3130 transposase, IS4 family protein
YP_002018173.1	PFAM: transposase IS200-family protein; KEGG: amr:AM1_C0253 transposase, IS200-family
YP_002018174.1	KEGG: sal:Sala_2858 hypothetical protein
YP_002018175.1	PFAM: cobalbumin biosynthesis protein; KEGG: cch:Cag_0846 cobalamin biosynthesis protein CobP
YP_002018176.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
YP_002018177.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cch:Cag_1057 cobalamin-5-phosphate synthase CobS
YP_002018178.1	PFAM: metallophosphoesterase; KEGG: cph:Cpha266_2593 metallophosphoesterase
YP_002018179.1	KEGG: cch:Cag_1042 hypothetical protein
YP_002018180.1	KEGG: dol:Dole_3264 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein
YP_002018181.1	KEGG: cph:Cpha266_0521 hypothetical protein
YP_002018182.1	PFAM: hypothetical protein-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3497 peptidase-like
YP_002018183.1	KEGG: cch:Cag_1430 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein
YP_002018184.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cph:Cpha266_1256 oxidoreductase FAD/NAD(P)-binding domain protein
YP_002018185.1	KEGG: cch:Cag_1032 hydrogenase/sulfur reductase, beta subunit
YP_002018186.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_1258 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_002018187.1	PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: cph:Cpha266_1259 methyl-viologen-reducing hydrogenase, delta subunit
YP_002018188.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_1260 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_002018189.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cch:Cag_1028 heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C
YP_002018190.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_002018191.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: cch:Cag_1020 YjeF-related protein-like
YP_002018192.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_002018193.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins
YP_002018194.1	PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: cph:Cpha266_1679 3-beta hydroxysteroid dehydrogenase/isomerase
YP_002018195.1	PFAM: HhH-GPD family protein; 8-oxoguanine DNA glycosylase domain protein; KEGG: cph:Cpha266_1267 HhH-GPD family protein
YP_002018196.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: cph:Cpha266_1275 NAD-dependent epimerase/dehydratase
YP_002018197.1	KEGG: cch:Cag_1069 hypothetical protein
YP_002018198.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_002018199.1	PFAM: histone family protein DNA-binding protein; KEGG: cch:Cag_0362 histone-like DNA-binding protein
YP_002018200.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: plt:Plut_0343 multi-sensor signal transduction histidine kinase
YP_002018201.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: plt:Plut_0344 two component transcriptional regulator, fis family
YP_002018202.1	KEGG: pvi:Cvib_0916 hypothetical protein
YP_002018203.1	KEGG: plt:Plut_0346 hypothetical protein
YP_002018204.1	KEGG: cch:Cag_0916 C-type cytochrome
YP_002018205.1	KEGG: cph:Cpha266_1270 hypothetical protein
YP_002018206.1	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: cph:Cpha266_1457 dinitrogenase iron-molybdenum cofactor biosynthesis
YP_002018207.1	PFAM: regulatory protein TetR; KEGG: cph:Cpha266_1240 transcriptional regulator, TetR family
YP_002018208.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cph:Cpha266_1241 efflux transporter, RND family, MFP subunit
YP_002018209.1	PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1242 protein of unknown function DUF214
YP_002018210.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_1243 ABC transporter related
YP_002018211.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_002018212.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: cch:Cag_1064 molybdopterin binding domain
YP_002018213.1	in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; MobB is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway
YP_002018214.1	KEGG: cph:Cpha266_2508 hypothetical protein
YP_002018215.1	KEGG: cph:Cpha266_0683 hypothetical protein
YP_002018216.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cte:CT0496 polysulfide reductase, subunit A
YP_002018217.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT0495 polysulfide reductase, subunit B
YP_002018218.1	PFAM: Polysulphide reductase NrfD; KEGG: pvi:Cvib_1687 polysulphide reductase, NrfD
YP_002018219.1	PFAM: cytoplasmic chaperone TorD family protein; KEGG: cte:CT0493 hypothetical protein
YP_002018220.1	KEGG: cph:Cpha266_0734 GTP cyclohydrolase subunit MoaA; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: radical SAM protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002018221.1	PFAM: MOSC domain containing protein; KEGG: cph:Cpha266_0733 MOSC domain containing protein
YP_002018222.1	PFAM: OsmC family protein; KEGG: cph:Cpha266_1001 OsmC family protein
YP_002018223.1	KEGG: cte:CT1087 sulfide-quinone reductase
YP_002018224.1	PFAM: protein of unknown function DUF134; KEGG: cch:Cag_0886 hypothetical protein
YP_002018225.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_1238 methyltransferase type 11
YP_002018226.1	KEGG: cph:Cpha266_2565 hypothetical protein
YP_002018227.1	KEGG: cte:CT0982 hypothetical protein
YP_002018228.1	KEGG: cch:Cag_0882 sulfide-quinone reductase
YP_002018229.1	KEGG: cch:Cag_0881 hypothetical protein
YP_002018230.1	PFAM: protein of unknown function DUF218; KEGG: cte:CT1146 hypothetical protein
YP_002018231.1	KEGG: cph:Cpha266_1549 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: GAF domain protein
YP_002018232.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cch:Cag_0383 oxidoreductase, short-chain dehydrogenase/reductase family
YP_002018233.1	PFAM: basic membrane lipoprotein; KEGG: cph:Cpha266_1340 basic membrane lipoprotein
YP_002018234.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: cch:Cag_0793 3-beta hydroxysteroid dehydrogenase/isomerase family protein
YP_002018235.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_1338 methyltransferase type 11
YP_002018236.1	KEGG: cch:Cag_0897 hypothetical protein
YP_002018237.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_002018238.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: cch:Cag_0899 5-formyltetrahydrofolate cyclo-ligase
YP_002018239.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_002018240.1	KEGG: cch:Cag_0901 ribose/galactose isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase
YP_002018241.1	PFAM: CBS domain containing protein; KEGG: cph:Cpha266_1331 CBS domain containing protein
YP_002018242.1	KEGG: cph:Cpha266_1330 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_002018243.1	catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate
YP_002018244.1	KEGG: cph:Cpha266_1304 C-terminal processing peptidase-1. Serine peptidase. MEROPS family S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_002018245.1	KEGG: xau:Xaut_0355 phospholipid N-methyltransferase
YP_002018246.1	KEGG: cph:Cpha266_1304 C-terminal processing peptidase-1. Serine peptidase. MEROPS family S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_002018247.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_002018248.1	PFAM: peptidase S24 and S26 domain protein; KEGG: pvi:Cvib_0128  prophage repressor
YP_002018249.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: cph:Cpha266_1031 DNA-directed DNA polymerase
YP_002018250.1	TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: cph:Cpha266_2176 death-on-curing family protein
YP_002018251.1	TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: cph:Cpha266_2175 transcriptional regulator/antitoxin, MazE
YP_002018252.1	KEGG: pvi:Cvib_0831 hypothetical protein
YP_002018253.1	PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1552 uncharacterised conserved protein UCP025560
YP_002018254.1	KEGG: cph:Cpha266_1551 hypothetical protein
YP_002018255.1	PFAM: pentapeptide repeat protein; KEGG: cph:Cpha266_1326 pentapeptide repeat protein
YP_002018256.1	PFAM: plasmid maintenance system killer; KEGG: chu:CHU_0643 hypothetical protein
YP_002018257.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: chu:CHU_0642 hypothetical protein
YP_002018258.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_002018259.1	PFAM: arginine repressor; KEGG: cch:Cag_0776 arginine repressor
YP_002018260.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_002018261.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_002018262.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_002018263.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
YP_002018265.1	KEGG: cph:Cpha266_1319 phosphate-binding protein
YP_002018266.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pvi:Cvib_0875 diguanylate cyclase
YP_002018267.1	PFAM: protein of unknown function DUF214; KEGG: plt:Plut_1052 hypothetical protein
YP_002018268.1	PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1316 protein of unknown function DUF214
YP_002018269.1	PFAM: GCN5-related N-acetyltransferase; Rubredoxin-type Fe(Cys)4 protein; KEGG: cph:Cpha266_1314 GCN5-related N-acetyltransferase
YP_002018270.1	PFAM: protein of unknown function UPF0016; KEGG: cph:Cpha266_1312 protein of unknown function UPF0016
YP_002018271.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_002018272.1	PFAM: ATP-grasp domain protein; KEGG: cph:Cpha266_1307 ATP citrate lyase subunit 1
YP_002018273.1	PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: cph:Cpha266_1306 ATP citrate lyase subunit 2
YP_002018274.1	PFAM: RNP-1 like RNA-binding protein; KEGG: cph:Cpha266_1273 RNP-1 like RNA-binding protein
YP_002018275.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: plt:Plut_0104 hypothetical protein
YP_002018276.1	PFAM: protein of unknown function DUF86; KEGG: ppd:Ppro_2947 protein of unknown function DUF86
YP_002018277.1	PFAM: DNA polymerase beta domain protein region; KEGG: bcz:pE33L466_0269 possible nucleotidyltransferase
YP_002018278.1	KEGG: cph:Cpha266_1287 hypothetical protein
YP_002018279.1	KEGG: cph:Cpha266_2183 hypothetical protein
YP_002018280.1	KEGG: cph:Cpha266_1286 hypothetical protein
YP_002018281.1	KEGG: pdi:BDI_2151 hypothetical protein
YP_002018282.1	KEGG: cph:Cpha266_1284 hypothetical protein
YP_002018283.1	KEGG: cph:Cpha266_1285 hypothetical protein
YP_002018284.1	KEGG: cph:Cpha266_1289 hypothetical protein
YP_002018285.1	KEGG: cph:Cpha266_1290 hypothetical protein
YP_002018286.1	KEGG: cph:Cpha266_1292 hypothetical protein
YP_002018287.1	PFAM: PilT protein domain protein; KEGG: ava:Ava_0767 PilT protein-like
YP_002018288.1	KEGG: ava:Ava_4033 hypothetical protein
YP_002018289.1	KEGG: cph:Cpha266_2183 hypothetical protein
YP_002018290.1	KEGG: xau:Xaut_0217 hypothetical protein
YP_002018292.1	KEGG: pdi:BDI_2151 hypothetical protein
YP_002018293.1	PFAM: transposase IS200-family protein; KEGG: amr:AM1_C0253 transposase, IS200-family
YP_002018294.1	KEGG: son:SO_4263 hypothetical protein
YP_002018296.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cch:Cag_1708 hypothetical protein
YP_002018297.1	KEGG: dge:Dgeo_1545  type II DNA modification enzyme
YP_002018298.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_1301 helicase domain protein
YP_002018299.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: cph:Cpha266_1302 DEAD/DEAH box helicase domain protein
YP_002018300.1	KEGG: ppd:Ppro_1864 helicase, RecD/TraA family; TIGRFAM: helicase, RecD/TraA family; SMART: AAA ATPase
YP_002018301.1	PFAM: histone family protein DNA-binding protein; KEGG: cph:Cpha266_0424 histone family protein DNA-binding protein
YP_002018302.1	KEGG: plt:Plut_1093 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein
YP_002018303.1	PFAM: AAA-4 family protein; KEGG: lpn:lpg2559 ATP-dependent DNA helicase
YP_002018304.1	KEGG: cho:Chro.40191 hypothetical protein
YP_002018305.1	KEGG: cph:Cpha266_1359 hypothetical protein
YP_002018306.1	TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: cch:Cag_0770 exodeoxyribonuclease V, alpha subunit
YP_002018307.1	TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: cch:Cag_0769 exodeoxyribonuclease V, beta subunit
YP_002018308.1	TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: cch:Cag_0763 exodeoxyribonuclease V, RecC subunit
YP_002018309.1	KEGG: cph:Cpha266_1127 hypothetical protein
YP_002018310.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_1126 ATP-dependent DNA helicase RecQ
YP_002018311.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cph:Cpha266_1144 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_002018312.1	PFAM: protein of unknown function DUF307; KEGG: mag:amb4030 predicted membrane protein
YP_002018313.1	KEGG: rba:RB11160 hypothetical protein
YP_002018314.1	PFAM: protein of unknown function UPF0150; KEGG: mar:MAE_44020 hypothetical protein
YP_002018315.1	KEGG: cph:Cpha266_1151  transcriptional regulator
YP_002018316.1	TIGRFAM: addiction module toxin, Txe/YoeB family; addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; Addiction module toxin Txe/YoeB; KEGG: fjo:Fjoh_0231 addiction module toxin, Txe/YoeB family
YP_002018317.1	KEGG: cch:Cag_1210 hypothetical protein
YP_002018318.1	KEGG: cph:Cpha266_1152 prophage antirepressor
YP_002018319.1	PFAM: AAA-4 family protein; KEGG: mbu:Mbur_0507 divergent AAA ATPase
YP_002018320.1	KEGG: cph:Cpha266_1142 hypothetical protein
YP_002018321.1	KEGG: tcx:Tcr_0366 TIR
YP_002018323.1	PFAM: restriction modification system DNA specificity domain; KEGG: cch:Cag_1526 restriction endonuclease S subunits-like
YP_002018325.1	PFAM:  RNA methylase; N-6 DNA methylase; KEGG: cph:Cpha266_1130 N-6 DNA methylase
YP_002018326.1	PFAM: AAA-4 family protein; KEGG: cph:Cpha266_1129  transcriptional regulator
YP_002018327.1	PFAM: type III restriction protein res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_1128 type III restriction enzyme, res subunit
YP_002018328.1	PFAM: PEBP family protein; KEGG: rfr:Rfer_3962 YbcL
YP_002018329.1	PFAM: SMC domain protein; KEGG: cch:Cag_1092 hypothetical protein
YP_002018330.1	PFAM: metallophosphoesterase; KEGG: cch:Cag_1093  exonuclease
YP_002018331.1	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis
YP_002018332.1	KEGG: mth:MTH632 hypothetical protein
YP_002018333.1	KEGG: pin:Ping_0257 hypothetical protein
YP_002018334.1	KEGG: bxe:Bxe_C1257 hypothetical protein
YP_002018335.1	KEGG: mma:MM_3344 transposase
YP_002018336.1	KEGG: cph:Cpha266_1478 transposase
YP_002018337.1	PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: rso:RSc0827 hypothetical protein
YP_002018338.1	KEGG: pmn:PMN2A_0955 hypothetical protein
YP_002018339.1	PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: fre:Franean1_5335 peptidase C14 caspase catalytic subunit P20
YP_002018340.1	PFAM: hypothetical protein-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mba:Mbar_A3708 hypothetical protein
YP_002018341.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cch:Cag_0397 protein tyrosine phosphatase
YP_002018342.1	PFAM: permease; KEGG: cph:Cpha266_0464 permease
YP_002018343.1	TIGRFAM: redox-active disulfide protein 2; KEGG: cch:Cag_0399 redox-active disulfide protein 2
YP_002018344.1	PFAM: regulatory protein ArsR; KEGG: cch:Cag_0425  transcriptional regulator, ArsR family
YP_002018345.1	KEGG: cch:Cag_0916 C-type cytochrome
YP_002018346.1	KEGG: cph:Cpha266_2705 hypothetical protein
YP_002018347.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: cph:Cpha266_1407 plasmid maintenance system antidote protein, XRE family
YP_002018348.1	PFAM: protein of unknown function DUF195; KEGG: cph:Cpha266_1053 protein of unknown function DUF195
YP_002018349.1	PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cch:Cag_1114 DegT/DnrJ/EryC1/StrS family protein
YP_002018350.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: cch:Cag_1128 alcohol dehydrogenase, iron-containing
YP_002018351.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: cph:Cpha266_1514 acylneuraminate cytidylyltransferase
YP_002018352.1	KEGG: cph:Cpha266_1515 hypothetical protein
YP_002018353.1	KEGG: cph:Cpha266_1516 hypothetical protein
YP_002018354.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cph:Cpha266_1519 AMP-dependent synthetase and ligase
YP_002018355.1	PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: cph:Cpha266_1520 HhH-GPD family protein
YP_002018356.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_002018357.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_002018358.1	TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: cph:Cpha266_1523 16S rRNA processing protein RimM
YP_002018359.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_002018360.1	KEGG: cch:Cag_0805 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_002018361.1	TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: pvi:Cvib_0937 RfaE bifunctional protein
YP_002018362.1	KEGG: cph:Cpha266_1527 hypothetical protein
YP_002018363.1	PFAM: cyclase/dehydrase; KEGG: cph:Cpha266_1528 cyclase/dehydrase
YP_002018364.1	KEGG: cch:Cag_0813 peptidase S41A, C-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_002018365.1	PFAM: Endoribonuclease L-PSP; KEGG: cph:Cpha266_1530 endoribonuclease L-PSP
YP_002018366.1	PFAM: thiamine monophosphate synthase; KEGG: cph:Cpha266_1531 thiamine monophosphate synthase
YP_002018367.1	KEGG: pvi:Cvib_0943 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_002018368.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: cch:Cag_0817 phosphomethylpyrimidine kinase
YP_002018369.1	KEGG: plt:Plut_0956 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_002018370.1	KEGG: cph:Cpha266_1535 hypothetical protein
YP_002018371.1	KEGG: cph:Cpha266_1536 hypothetical protein
YP_002018372.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_002018373.1	PFAM: phosphoesterase RecJ domain protein; KEGG: plt:Plut_0953 Dhh family protein
YP_002018375.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: radical SAM protein; KEGG: pvi:Cvib_0950 radical SAM enzyme, Cfr family
YP_002018376.1	KEGG: cph:Cpha266_1540 hypothetical protein
YP_002018377.1	PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: cph:Cpha266_1541 adenylate kinase
YP_002018378.1	KEGG: cch:Cag_0828 primosomal protein N; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_002018379.1	KEGG: cte:CT0487 hypothetical protein
YP_002018380.1	PFAM: CBS domain containing protein; Chloride channel core; KEGG: cph:Cpha266_1246 Cl-channel, voltage-gated family protein
YP_002018381.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_002018382.1	KEGG: plt:Plut_1162  anti-sigma regulatory factor (serine/threonine protein kinase)
YP_002018383.1	KEGG: cph:Cpha266_1093 hypothetical protein
YP_002018384.1	KEGG: cch:Cag_1375 hypothetical protein
YP_002018385.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_002018386.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_002018387.1	KEGG: cch:Cag_1378 anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase
YP_002018388.1	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: cph:Cpha266_1087 lytic transglycosylase, catalytic
YP_002018389.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_002018390.1	KEGG: cch:Cag_1381 alpha-amylase family protein
YP_002018391.1	PFAM: PfkB domain protein; KEGG: pvi:Cvib_0779 PfkB domain protein
YP_002018392.1	PFAM: Na+/solute symporter; KEGG: cch:Cag_1384 sodium:solute symporter family protein
YP_002018393.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: cch:Cag_1393 Maf-like protein
YP_002018394.1	PFAM: Alcohol dehydrogenase GroES domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: plt:Plut_0923 chlorobiumquinone synthase BchC related protein
YP_002018395.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_1498 ATPase
YP_002018396.1	PFAM: inner-membrane translocator; KEGG: cch:Cag_1499 membrane protein
YP_002018397.1	KEGG: cph:Cpha266_0991 hypothetical protein
YP_002018398.1	KEGG: cch:Cag_1501 hypothetical protein
YP_002018399.1	PFAM: PASTA domain containing protein; KEGG: cph:Cpha266_0989 PASTA domain containing protein
YP_002018400.1	PFAM: Polyprenyl synthetase; KEGG: cch:Cag_0963 polyprenyl synthetase
YP_002018401.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: pvi:Cvib_0974 sec-independent protein translocase TatC
YP_002018402.1	PFAM:  esterase; KEGG: pvi:Cvib_0975  esterase
YP_002018403.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_002018404.1	KEGG: plt:Plut_1223 hypothetical protein
YP_002018405.1	PFAM: manganese and iron superoxide dismutase; KEGG: pvi:Cvib_0978 superoxide dismutase
YP_002018406.1	KEGG: cch:Cag_0800 hypothetical protein
YP_002018407.1	PFAM: Protein of unknown function methylase KEGG: cch:Cag_0756 hypothetical protein
YP_002018408.1	KEGG: cte:CT1217 hypothetical protein
YP_002018409.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cph:Cpha266_0173 ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_002018410.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cch:Cag_1151 thioredoxin reductase
YP_002018411.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pvi:Cvib_1012 thioredoxin
YP_002018412.1	TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: pvi:Cvib_1012 thioredoxin
YP_002018413.1	KEGG: cph:Cpha266_1195 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_002018414.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: cph:Cpha266_1951 plasmid maintenance system antidote protein, XRE family
YP_002018415.1	PFAM: plasmid maintenance system killer; KEGG: sfu:Sfum_1442 killer suppression protein HigA
YP_002018416.1	PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cph:Cpha266_1194 kojibiose phosphorylase
YP_002018417.1	PFAM: leucine-rich repeat protein; KEGG: cph:Cpha266_1193 internalin-related protein
YP_002018418.1	KEGG: cph:Cpha266_0645 hypothetical protein
YP_002018419.1	PFAM: protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_0457  signal transduction protein with NACHT domain
YP_002018420.1	PFAM: PilT protein domain protein; KEGG: neu:NE2174 hypothetical protein
YP_002018421.1	KEGG: cch:Cag_0858 hypothetical protein
YP_002018422.1	KEGG: cph:Cpha266_0460 protein of unknown function DUF323
YP_002018423.1	PFAM: HipA domain protein; KEGG: bxe:Bxe_B2229 hypothetical protein
YP_002018424.1	SMART: helix-turn-helix domain protein; KEGG: bpt:Bpet1353  DNA-binding protein
YP_002018425.1	KEGG: mar:MAE_07660 hypothetical protein
YP_002018426.1	PFAM: protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_1299 protein of unknown function DUF323
YP_002018427.1	PFAM: protein of unknown function DUF1703; KEGG: cch:Cag_1721 hypothetical protein
YP_002018428.1	PFAM: protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_1893 protein of unknown function DUF323
YP_002018429.1	PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; KEGG: cch:Cag_0859 oxaloacetate decarboxylase, alpha subunit
YP_002018430.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: cch:Cag_0860 Fe-S type hydro-lyase tartrate/fumarate alpha and beta region
YP_002018431.1	PFAM: UspA domain protein; KEGG: plt:Plut_1270 universal stress protein family
YP_002018432.1	KEGG: cch:Cag_0861 hypothetical protein
YP_002018433.1	PFAM: protein of unknown function DUF125 transmembrane; KEGG: cch:Cag_1070 hypothetical protein
YP_002018434.1	molecular chaperone
YP_002018435.1	PFAM: N-acetylneuraminic acid synthase domain; KEGG: cch:Cag_1072 sialic acid synthase
YP_002018436.1	TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: plt:Plut_1275 phosphatase KdsC
YP_002018438.1	PFAM: Inorganic pyrophosphatase; KEGG: plt:Plut_1277 inorganic diphosphatase
YP_002018439.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: cte:CT0822 sodium:alanine symporter family protein
YP_002018440.1	TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; KEGG: cch:Cag_0946 peptide chain release factor 3
YP_002018441.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: cph:Cpha266_2532 heavy metal translocating P-type ATPase
YP_002018442.1	PFAM: Domain of unknown function DUF1848; KEGG: cph:Cpha266_1022 hypothetical protein
YP_002018443.1	KEGG: cph:Cpha266_1681 hypothetical protein
YP_002018444.1	KEGG: cph:Cpha266_1680 Pep581 peptidase. Metallo peptidase. MEROPS family M20C; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_002018445.1	KEGG: cph:Cpha266_1686 hypothetical protein
YP_002018446.1	PFAM: Domain of unknown function DUF1801; KEGG: cph:Cpha266_1691 hypothetical protein
YP_002018447.1	PFAM: protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_0457  signal transduction protein with NACHT domain
YP_002018448.1	PFAM: protein of unknown function DUF86; KEGG: cph:Cpha266_0768 protein of unknown function DUF86
YP_002018449.1	PFAM: DNA polymerase beta domain protein region; KEGG: cph:Cpha266_0766 DNA polymerase, beta domain protein region
YP_002018450.1	KEGG: cph:Cpha266_1424 nitroreductase
YP_002018451.1	PFAM: protein of unknown function DUF45; KEGG: mma:MM_2291 zinc metalloprotease
YP_002018452.1	PFAM: protein of unknown function UPF0150; KEGG: tbd:Tbd_1973 hypothetical protein
YP_002018453.1	KEGG: mar:MAE_00130 hypothetical protein
YP_002018454.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: cph:Cpha266_1697 prevent-host-death family protein
YP_002018455.1	KEGG: cph:Cpha266_1700 hypothetical protein
YP_002018456.1	PFAM: helix-turn-helix domain protein; KEGG: cph:Cpha266_1701 helix-turn-helix domain protein
YP_002018457.1	KEGG: mms:mma_0495 hypothetical protein
YP_002018458.1	KEGG: cak:Caul_4682 hypothetical protein
YP_002018459.1	KEGG: tdn:Tmden_0480 hypothetical protein
YP_002018460.1	KEGG: cch:Cag_1049 hypothetical protein
YP_002018461.1	KEGG: mma:MM_2294 type I restriction-modification system specificity subunit
YP_002018462.1	PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: cph:Cpha266_1254 peptidase C14, caspase catalytic subunit P20
YP_002018463.1	PFAM: peptidase membrane zinc metallopeptidase KEGG: pvi:Cvib_1043 peptidase, membrane zinc metallopeptidase
YP_002018464.1	PFAM: amino acid permease-associated region; KEGG: plt:Plut_1308 amino acid permease
YP_002018465.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cph:Cpha266_1636 short-chain dehydrogenase/reductase SDR
YP_002018466.1	PFAM: thymidylate kinase; KEGG: plt:Plut_1310 thymidylate kinase
YP_002018467.1	KEGG: cph:Cpha266_1639 hypothetical protein
YP_002018468.1	TIGRFAM: beta-phosphoglucomutase family hydrolase; PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; Haloacid dehalogenase domain protein hydrolase; KEGG: cch:Cag_0927 beta-phosphoglucomutase hydrolase
YP_002018469.1	TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: plt:Plut_1313 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_002018470.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: cch:Cag_0929 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_002018471.1	PFAM: thioesterase superfamily protein; KEGG: cch:Cag_0930 phenylacetic acid degradation-related protein
YP_002018472.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_1644 radical SAM protein
YP_002018473.1	KEGG: cph:Cpha266_1649 hypothetical protein
YP_002018474.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_002018475.1	KEGG: cch:Cag_0933 DNA polymerase III, gamma/tau subunit
YP_002018476.1	KEGG: cch:Cag_0934 ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_002018477.1	PFAM: ribonuclease BN; KEGG: cph:Cpha266_1653  ribonuclease BN
YP_002018478.1	PFAM: major facilitator superfamily MFS_1; KEGG: cph:Cpha266_1654 major facilitator superfamily MFS_1
YP_002018479.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_002018480.1	TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: cch:Cag_0938 phosphoribosylformylglycinamidine synthetase PurS
YP_002018481.1	TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cch:Cag_0939 CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_002018482.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_002018483.1	PFAM: biotin/lipoate A/B protein ligase; KEGG: cch:Cag_0906 lipoate-protein ligase A
YP_002018484.1	PFAM: CoA-binding domain protein; KEGG: plt:Plut_1330 hypothetical protein
YP_002018485.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_002018486.1	KEGG: cch:Cag_0904 hypothetical protein
YP_002018487.1	PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_1665 outer membrane efflux protein
YP_002018488.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cch:Cag_0987 secretion protein HlyD
YP_002018489.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1335 ATPase
YP_002018490.1	PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1668 protein of unknown function DUF214
YP_002018491.1	PFAM: protein of unknown function DUF214; KEGG: pvi:Cvib_0716 protein of unknown function DUF214
YP_002018492.1	PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: plt:Plut_1338 OmpA family protein
YP_002018493.1	KEGG: cph:Cpha266_1672 hypothetical protein
YP_002018494.1	PFAM: protein of unknown function DUF547; glycoside hydrolase 15-related; KEGG: noc:Noc_2053 glycoside hydrolase 15-related
YP_002018495.1	TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: pvi:Cvib_0713 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_002018496.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_002018497.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_002018498.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cph:Cpha266_1676 binding-protein-dependent transport systems inner membrane component
YP_002018499.1	KEGG: cph:Cpha266_0748 hypothetical protein
YP_002018500.1	PFAM: ComEC/Rec2-related protein; KEGG: cph:Cpha266_1722 ComEC/Rec2-related protein
YP_002018501.1	KEGG: cch:Cag_1108 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_002018502.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: cph:Cpha266_1724 diaminopimelate decarboxylase
YP_002018503.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_002018504.1	PFAM: protein of unknown function DUF164; KEGG: cch:Cag_1111 hypothetical protein
YP_002018505.1	KEGG: cph:Cpha266_1731 hypothetical protein
YP_002018506.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: cch:Cag_0799 oxidoreductase, FAD-binding
YP_002018507.1	KEGG: cph:Cpha266_1788  PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; SMART: PAS domain containing protein
YP_002018508.1	KEGG: cph:Cpha266_1549 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002018509.1	KEGG: cph:Cpha266_1051 hypothetical protein
YP_002018510.1	KEGG: cph:Cpha266_1437 hypothetical protein
YP_002018511.1	TIGRFAM: CRISPR-associated helicase Cas3; SMART: DEAD-like helicases; KEGG: dvl:Dvul_2978 metal dependent phosphohydrolase
YP_002018512.1	TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: dvl:Dvul_2977 CRISPR-associated protein Cas5 family
YP_002018513.1	TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133; KEGG: drm:Dred_1004 CRISPR-associated protein, Csd1 family
YP_002018514.1	TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family; PFAM: CRISPR-associated protein TM1801; KEGG: cph:Cpha266_1433 CRISPR-associated protein, Csd2 family
YP_002018515.1	TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: cph:Cpha266_1432 CRISPR-associated protein Cas4
YP_002018516.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: cph:Cpha266_1431 CRISPR-associated protein Cas1
YP_002018517.1	TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: cph:Cpha266_1430 CRISPR-associated protein Cas2
YP_002018518.1	KEGG: cph:Cpha266_1274 hypothetical protein
YP_002018519.1	PFAM: transposase IS4 family protein; KEGG: dol:Dole_3091 transposase IS4 family protein
YP_002018520.1	PFAM: transposase IS4 family protein; KEGG: mar:MAE_30320 transposase
YP_002018521.1	KEGG: cph:Cpha266_1549 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002018522.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: cph:Cpha266_1050 short-chain dehydrogenase/reductase SDR
YP_002018523.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: gfo:GFO_3028 DNA polymerase III subunit alpha-1
YP_002018524.1	KEGG: cch:Cag_0968 hypothetical protein
YP_002018525.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1049 glycosyl transferase, family 2
YP_002018526.1	KEGG: cph:Cpha266_1047 hypothetical protein
YP_002018527.1	KEGG: cph:Cpha266_1046 hypothetical protein
YP_002018528.1	PFAM: acriflavin resistance protein; KEGG: cch:Cag_0971 NolG efflux transporter
YP_002018529.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cch:Cag_0972 secretion protein HlyD
YP_002018530.1	PFAM: PhoU family protein; KEGG: cph:Cpha266_1043 phosphate uptake regulator, PhoU
YP_002018531.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: cch:Cag_0974 PhoU
YP_002018532.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_002018533.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cph:Cpha266_1040 phosphate ABC transporter, inner membrane subunit PstA
YP_002018534.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cph:Cpha266_1039 phosphate ABC transporter, inner membrane subunit PstC
YP_002018535.1	TIGRFAM: phosphate binding protein; KEGG: cph:Cpha266_1038 phosphate binding protein
YP_002018536.1	KEGG: cch:Cag_0975 chlorosome envelope protein B
YP_002018537.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cph:Cpha266_1237 HAD-superfamily hydrolase, subfamily IA, variant 3
YP_002018538.1	PFAM: Alkaline phosphatase; metallophosphoesterase; metalloenzyme domain protein; 5'-Nucleotidase domain protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: cph:Cpha266_1750 5'-nucleotidase domain protein
YP_002018539.1	KEGG: cph:Cpha266_1035 hypothetical protein
YP_002018540.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pvi:Cvib_1001 hypothetical protein
YP_002018541.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: plt:Plut_1250 phospholipid/glycerol acyltransferase
YP_002018542.1	KEGG: aae:aq_031 transporter (PHO87 family)
YP_002018543.1	KEGG: cph:Cpha266_1199 hypothetical protein
YP_002018544.1	KEGG: cph:Cpha266_1030 hypothetical protein
YP_002018545.1	KEGG: dol:Dole_2934 hypothetical protein
YP_002018546.1	KEGG: cph:Cpha266_2366 helix-turn-helix domain protein
YP_002018547.1	KEGG: cte:CT0885 hypothetical protein
YP_002018548.1	PvlArgDC; converts arginine to agmatine and carbon dioxide; has a role in polyamine metabolism; in Methanococcus jannaschii this enzyme self-cleaves at serine-serine bond to form alpha (N-terminal) and beta (C-terminal) subunits; the alpha subunit contains a catalytically active pyruvoyl group; the beta subunit contains the substrate-binding residues; forms homotrimers of the alpha/beta complex
YP_002018549.1	KEGG: cte:CT0885 hypothetical protein
YP_002018550.1	KEGG: cph:Cpha266_0991 hypothetical protein
YP_002018551.1	PFAM: CHAD domain containing protein; KEGG: cte:CT0884 hypothetical protein
YP_002018552.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pvi:Cvib_0908 cobyrinic acid a,c-diamide synthase
YP_002018553.1	PFAM: Alkaline phosphatase; KEGG: cph:Cpha266_2693 alkaline phosphatase
YP_002018554.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pvi:Cvib_1147 two component transcriptional regulator, winged helix family
YP_002018555.1	KEGG: cph:Cpha266_0881 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002018556.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1813 glycosyl transferase, family 2
YP_002018557.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1811 glycosyl transferase, family 2
YP_002018558.1	PFAM: plasmid stabilization system; KEGG: cch:Cag_1130 hypothetical protein
YP_002018559.1	KEGG: swo:Swol_1551 hypothetical protein
YP_002018560.1	KEGG: cph:Cpha266_1183 hypothetical protein
YP_002018561.1	PFAM: protein of unknown function DUF433; KEGG: cph:Cpha266_2222 protein of unknown function DUF433
YP_002018562.1	KEGG: cph:Cpha266_2196 hypothetical protein
YP_002018563.1	KEGG: cph:Cpha266_1183 hypothetical protein
YP_002018564.1	KEGG: cph:Cpha266_0769 hypothetical protein
YP_002018565.1	PFAM: hypothetical protein-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cch:Cag_0873 hypothetical protein
YP_002018566.1	KEGG: cph:Cpha266_2604 hypothetical protein
YP_002018567.1	KEGG: gur:Gura_2218 hypothetical protein
YP_002018568.1	PFAM: protein of unknown function DUF497; KEGG: rrs:RoseRS_0832 protein of unknown function DUF497
YP_002018569.1	KEGG: cph:Cpha266_0070 helix-turn-helix protein, CopG family
YP_002018570.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA4135 GCN5-related N-acetyltransferase
YP_002018571.1	PFAM: Protein of unknown function DUF1778; KEGG: rpe:RPE_1144 hypothetical protein
YP_002018572.1	PFAM: PilT protein domain protein; KEGG: cch:Cag_0660 hypothetical protein
YP_002018573.1	KEGG: cch:Cag_0659 hypothetical protein
YP_002018574.1	KEGG: ape:APE_0890a.1 hypothetical protein
YP_002018575.1	PFAM: protein of unknown function DUF891; KEGG: plt:Plut_0835 conserved hypothetical protein, phage-related
YP_002018576.1	PFAM: helix-turn-helix domain protein; KEGG: plt:Plut_0834 transcriptional regulator, XRE family
YP_002018577.1	KEGG: plt:Plut_1080 ATPase
YP_002018578.1	KEGG: cph:Cpha266_1199 hypothetical protein
YP_002018579.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cph:Cpha266_1198 tRNA guanosine-2'-O-methyltransferase
YP_002018580.1	PFAM: ferredoxin; KEGG: cph:Cpha266_1733 ferredoxin
YP_002018581.1	KEGG: cph:Cpha266_1735 hypothetical protein
YP_002018582.1	PFAM: protein of unknown function UPF0054; KEGG: cph:Cpha266_1736 protein of unknown function UPF0054
YP_002018583.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: cph:Cpha266_1737 GTP-binding protein, HSR1-related
YP_002018584.1	PFAM: Squalene/phytoene synthase; KEGG: cph:Cpha266_1738 squalene/phytoene synthase
YP_002018585.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_002018586.1	TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: swo:Swol_0220 nucleotidyltransferase substrate-binding protein
YP_002018587.1	PFAM: DNA polymerase beta domain protein region; KEGG: swo:Swol_0221 hypothetical protein
YP_002018589.1	KEGG: mar:MAE_08750 PemK-like protein
YP_002018590.1	KEGG: mlo:mlr2530 hypothetical protein
YP_002018591.1	KEGG: amr:AM1_1925 hypothetical protein
YP_002018592.1	KEGG: cyb:CYB_0386 hypothetical protein
YP_002018593.1	PFAM: protein of unknown function DUF1130; KEGG: cyb:CYB_0385 hypothetical protein
YP_002018594.1	KEGG: sun:SUN_0701 hypothetical protein
YP_002018595.1	KEGG: cch:Cag_0678 hypothetical protein
YP_002018596.1	KEGG: cph:Cpha266_2655 protein of unknown function DUF132
YP_002018597.1	PFAM: shikimate kinase; KEGG: csc:Csac_2240 shikimate kinase
YP_002018598.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cch:Cag_1182 capsular polysaccharide biosynthesis protein I
YP_002018599.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: cch:Cag_1183 hypothetical protein
YP_002018600.1	PFAM: protein of unknown function DUF403; KEGG: cch:Cag_1184 hypothetical protein
YP_002018601.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: cch:Cag_1185 transglutaminase-like
YP_002018602.1	KEGG: cph:Cpha266_1005 hypothetical protein
YP_002018603.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: cch:Cag_1187 cytochrome c551 peroxidase
YP_002018604.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: cph:Cpha266_1353 cytochrome-c peroxidase
YP_002018605.1	KEGG: cph:Cpha266_1759 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase
YP_002018606.1	KEGG: cph:Cpha266_1760 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; radical SAM protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002018607.1	KEGG: gsu:GSU0055 hypothetical protein
YP_002018608.1	TIGRFAM: addiction module component, TIGR02574 family; PFAM:  addiction module component CHP02574 family protein; KEGG: cte:CT1476 hypothetical protein
YP_002018609.1	KEGG: cph:Cpha266_0845 alkylhydroperoxidase like protein, AhpD family
YP_002018610.1	TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: cph:Cpha266_0312 cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
YP_002018611.1	Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group
YP_002018612.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_002018613.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_002018614.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
YP_002018615.1	KEGG: cph:Cpha266_0834 hypothetical protein
YP_002018616.1	PFAM: glutamine synthetase catalytic region; KEGG: cph:Cpha266_0832 glutamine synthetase, catalytic region
YP_002018617.1	PFAM: regulatory protein AsnC/Lrp family; regulatory protein MarR; KEGG: cph:Cpha266_0831 transcriptional regulator, AsnC family
YP_002018618.1	PFAM: amine oxidase; KEGG: cph:Cpha266_0830 zeta-carotene desaturase
YP_002018619.1	KEGG: cch:Cag_1592 hypothetical protein
YP_002018620.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_0827 glycosyl transferase, family 2
YP_002018621.1	TIGRFAM: chlorosome envelope protein H; KEGG: plt:Plut_1416 chlorosome envelope protein H
YP_002018622.1	KEGG: cch:Cag_1595 deoxyUTP pyrophosphatase subfamily 1; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase
YP_002018623.1	PFAM: LmbE family protein; KEGG: cch:Cag_1596 hypothetical protein
YP_002018624.1	KEGG: cch:Cag_0405 hypothetical protein
YP_002018625.1	TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cph:Cpha266_1037 phosphate binding protein
YP_002018626.1	PFAM: pentapeptide repeat protein; KEGG: cph:Cpha266_1048 pentapeptide repeat protein
YP_002018627.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_002018628.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_002018629.1	KEGG: plt:Plut_1465 hypothetical protein
YP_002018630.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_002018631.1	KEGG: cch:Cag_0494 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_002018632.1	KEGG: cph:Cpha266_1856 anthranilate synthase, component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like
YP_002018633.1	KEGG: cph:Cpha266_1857 hypothetical protein
YP_002018634.1	KEGG: cph:Cpha266_1858 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_002018635.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_002018636.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: cch:Cag_0487 methionyl-tRNA formyltransferase
YP_002018637.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_002018638.1	PFAM: response regulator receiver; KEGG: cph:Cpha266_1833  PAS/PAC sensor protein
YP_002018639.1	KEGG: cch:Cag_0489 IMP dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase
YP_002018641.1	TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: gur:Gura_1444 addiction module toxin, Txe/YoeB family
YP_002018642.1	KEGG: oan:Oant_1152 hypothetical protein
YP_002018643.1	KEGG: plt:Plut_0787 magnesium-chelatase, subunit H; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase
YP_002018644.1	KEGG: cph:Cpha266_1630 protoporphyrin IX magnesium-chelatase; TIGRFAM: magnesium chelatase ATPase subunit D; PFAM: magnesium chelatase ChlI subunit; von Willebrand factor A; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002018645.1	KEGG: cph:Cpha266_1631 protoporphyrin IX magnesium-chelatase; TIGRFAM: magnesium chelatase ATPase subunit I; SMART: AAA ATPase
YP_002018646.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cph:Cpha266_1632 dihydrolipoamide dehydrogenase
YP_002018647.1	KEGG: plt:Plut_0783 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_002018648.1	KEGG: plt:Plut_1093 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002018649.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: drm:Dred_2001 two component, sigma54 specific, transcriptional regulator, fis family
YP_002018650.1	PFAM: Gas vesicle K; KEGG: plt:Plut_0706 hypothetical protein
YP_002018651.1	PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: plt:Plut_0705 hypothetical protein
YP_002018652.1	PFAM: gas vesicle protein GVPa; KEGG: plt:Plut_0704 hypothetical protein
YP_002018653.1	PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: plt:Plut_0703 hypothetical protein
YP_002018654.1	KEGG: plt:Plut_0702 hypothetical protein
YP_002018655.1	PFAM: Gas vesicle G; KEGG: plt:Plut_0701 hypothetical protein
YP_002018656.1	PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: plt:Plut_0700 hypothetical protein
YP_002018657.1	PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: plt:Plut_0699 hypothetical protein
YP_002018658.1	PFAM: heat shock protein DnaJ domain protein; Gas vesicle synthesis GvpLGvpF; KEGG: plt:Plut_0698 hypothetical protein
YP_002018659.1	KEGG: plt:Plut_0697 AAA ATPase, CDC48; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein; AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; SMART: AAA ATPase
YP_002018660.1	KEGG: plt:Plut_0695 hypothetical protein
YP_002018661.1	PFAM: gas vesicle protein GVPa; KEGG: plt:Plut_0694  gas vesicle synthesis protein
YP_002018662.1	KEGG: plt:Plut_0693 hypothetical protein
YP_002018663.1	KEGG: plt:Plut_0692 ATPase; TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002018664.1	KEGG: plt:Plut_0691 hypothetical protein
YP_002018665.1	KEGG: plt:Plut_0690 hypothetical protein
YP_002018666.1	involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins
YP_002018667.1	involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins
YP_002018668.1	involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins
YP_002018669.1	involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins
YP_002018670.1	PFAM: DNA alkylation repair enzyme; KEGG: cph:Cpha266_1009 hypothetical protein
YP_002018671.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_1008 transcriptional regulator, Fis family
YP_002018672.1	KEGG: pvi:Cvib_1065 hypothetical protein
YP_002018673.1	KEGG: cph:Cpha266_1834 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002018674.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_0849 ATPase
YP_002018675.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cch:Cag_0850 ATPase
YP_002018676.1	PFAM: inner-membrane translocator; KEGG: cch:Cag_0851 branched-chain amino acid ABC transporter, permease
YP_002018677.1	PFAM: inner-membrane translocator; KEGG: cch:Cag_0852 branched-chain amino acid ABC transporter, permease
YP_002018678.1	PFAM: Extracellular ligand-binding receptor; KEGG: cch:Cag_0853 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_002018679.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: cph:Cpha266_1350 cupin 2, conserved barrel domain protein
YP_002018680.1	KEGG: cph:Cpha266_1230 hypothetical protein
YP_002018681.1	KEGG: cph:Cpha266_1229 succinylglutamate desuccinylase/aspartoacylase
YP_002018682.1	KEGG: cch:Cag_0845 transcriptional regulator, XRE family
YP_002018683.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_2109 methyltransferase type 11
YP_002018684.1	PFAM:  thiol-disulphide oxidoreductase DCC; KEGG: cph:Cpha266_2114  thiol-disulphide oxidoreductase DCC
YP_002018686.1	PFAM: helix-turn-helix domain protein; KEGG: cch:Cag_0845 transcriptional regulator, XRE family
YP_002018687.1	KEGG: pfl:PFL_1053 hypothetical protein
YP_002018688.1	KEGG: plu:plu3890 hypothetical protein
YP_002018689.1	PFAM: Protein of unknown function DUF1778; KEGG: plu:plu3889 hypothetical protein
YP_002018690.1	PFAM: protein of unknown function DUF1044; KEGG: plt:Plut_1817 hypothetical protein
YP_002018691.1	PFAM: helix-turn-helix domain protein; KEGG: plt:Plut_1818 transcriptional regulator, XRE family
YP_002018692.1	KEGG: fps:FP1227 probable transcriptional regulator, XRE family
YP_002018693.1	KEGG: scl:sce7684 hypothetical protein
YP_002018694.1	PFAM: SMC domain protein; KEGG: mar:MAE_39710 ATPase
YP_002018695.1	PFAM: helix-turn-helix domain protein; KEGG: cph:Cpha266_0938 helix-turn-helix domain protein
YP_002018696.1	KEGG: bth:BT_4036 hypothetical protein
YP_002018697.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: cph:Cpha266_1719 thioredoxin
YP_002018698.1	PFAM: OsmC family protein; KEGG: cph:Cpha266_1720 OsmC family protein
YP_002018700.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cch:Cag_0373 6-pyruvoyltetrahydropterin synthase
YP_002018701.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_002018702.1	TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: plt:Plut_1449 peptidase M52, hydrogen uptake protein
YP_002018703.1	TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: cph:Cpha266_0974 Ni/Fe-hydrogenase, b-type cytochrome subunit
YP_002018704.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: plt:Plut_1447 hydrogenase large chain
YP_002018705.1	KEGG: cph:Cpha266_0972 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein
YP_002018706.1	KEGG: plt:Plut_0753 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002018707.1	KEGG: cph:Cpha266_0970 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002018708.1	KEGG: cch:Cag_0642 NADH-plastoquinone oxidoreductase, chain 5; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_002018709.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: cch:Cag_0641 NADH dehydrogenase I subunit 4L
YP_002018710.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: pvi:Cvib_1087 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
YP_002018711.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cch:Cag_0639 NADH dehydrogenase I, 23 kDa subunit
YP_002018712.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: pvi:Cvib_1089 respiratory-chain NADH dehydrogenase, subunit 1
YP_002018713.1	PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: plt:Plut_0746 NADH dehydrogenase (ubiquinone)
YP_002018714.1	TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: pvi:Cvib_1091 NADH (or F420H2) dehydrogenase, subunit C
YP_002018715.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_002018716.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: plt:Plut_0743 NADH dehydrogenase I, subunit 3
YP_002018717.1	KEGG: cph:Cpha266_0960 hypothetical protein
YP_002018718.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_0959 hypothetical protein-containing protein
YP_002018719.1	PFAM: ferrochelatase; KEGG: cph:Cpha266_0958 ferrochelatase
YP_002018720.1	KEGG: cph:Cpha266_0957 hypothetical protein
YP_002018721.1	PFAM: histidine triad (HIT) protein; KEGG: cph:Cpha266_0956 histidine triad (HIT) protein
YP_002018722.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cph:Cpha266_0955 methyltransferase type 12
YP_002018723.1	PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region
YP_002018724.1	PFAM: transposase IS3/IS911 family protein; KEGG: net:Neut_1719 transposase IS3/IS911 family protein
YP_002018725.1	KEGG: sus:Acid_1150 hypothetical protein
YP_002018726.1	KEGG: sus:Acid_1151 hypothetical protein
YP_002018727.1	PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0954 outer membrane efflux protein
YP_002018728.1	PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_0953 recombination factor protein RarA
YP_002018729.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_002018730.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cph:Cpha266_0951 alpha amylase, catalytic region
YP_002018731.1	antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein
YP_002018732.1	PFAM: DoxX family protein; KEGG: pvi:Cvib_1104 DoxX family protein
YP_002018733.1	KEGG: cph:Cpha266_0944 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein
YP_002018734.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: plt:Plut_0726 deoxycytidylate deaminase
YP_002018735.1	PFAM: protein of unknown function DUF814; KEGG: cph:Cpha266_0942 protein of unknown function DUF814
YP_002018736.1	PFAM: UspA domain protein; KEGG: cte:CT1011 universal stress protein family
YP_002018737.1	PFAM: natural resistance-associated macrophage protein; KEGG: cte:CT1010 natural resistance-associated macrophage protein family protein
YP_002018738.1	PFAM: NADPH-dependent FMN reductase; KEGG: har:HEAR1499 conserved hypothetical protein, NADPH-dependent FMN reductase IPR005025
YP_002018739.1	KEGG: cph:Cpha266_0169 hypothetical protein
YP_002018740.1	PFAM: thioesterase superfamily protein; KEGG: cch:Cag_0621 cytosolic long-chain acyl-CoA thioester hydrolase family protein
YP_002018741.1	PFAM: permease YjgP/YjgQ family protein; KEGG: pvi:Cvib_1109 permease YjgP/YjgQ family protein
YP_002018742.1	KEGG: cph:Cpha266_1944 Legionella vir region protein
YP_002018743.1	KEGG: mex:Mext_1573 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system
YP_002018744.1	KEGG: cph:Cpha266_1282  DNA-binding protein
YP_002018746.1	PFAM: glutamine amidotransferase class-I; KEGG: pvi:Cvib_0576 glutamine amidotransferase class-I
YP_002018747.1	KEGG: cch:Cag_0876 DNA photolyase, class 2
YP_002018748.1	PFAM: OmpA/MotB domain protein; KEGG: pau:PA14_31620  ABC-type periplasmic phosphate-binding protein
YP_002018749.1	KEGG: pna:Pnap_3261 hypothetical protein
YP_002018750.1	KEGG: cph:Cpha266_1962 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain
YP_002018751.1	PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_1911 uncharacterized protein UPF0114
YP_002018752.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: plt:Plut_1521 magnesium and cobalt transport protein CorA
YP_002018753.1	PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: plt:Plut_1522  phosphoketolase
YP_002018754.1	TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: cte:CT1525 acetate kinase
YP_002018755.1	PFAM: helix-turn-helix domain protein; KEGG: cch:Cag_0914 transcriptional regulator, XRE family
YP_002018756.1	KEGG: cch:Cag_0913 hypothetical protein
YP_002018757.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_1156 short-chain dehydrogenase/reductase SDR
YP_002018758.1	TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: cph:Cpha266_1918 homocitrate synthase
YP_002018759.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_1919 DNA-binding protein fis / transcriptional regulator, Fis family
YP_002018760.1	PFAM: cell shape determining protein MreB/Mrl; KEGG: plt:Plut_0553 cell shape determining protein MreB/Mrl
YP_002018762.1	PFAM: aldo/keto reductase; KEGG: cph:Cpha266_1920 aldo/keto reductase
YP_002018763.1	KEGG: mar:MAE_05060 type I site-specific deoxyribonuclease
YP_002018764.1	KEGG: maq:Maqu_2675 hypothetical protein
YP_002018765.1	KEGG: syf:Synpcc7942_0410 hypothetical protein
YP_002018766.1	KEGG: mhu:Mhun_2432 hypothetical protein
YP_002018767.1	PFAM: helix-turn-helix domain protein; KEGG: cph:Cpha266_0650 transcriptional regulator, XRE family
YP_002018768.1	KEGG: cch:Cag_1502 hypothetical protein
YP_002018769.1	KEGG: cau:Caur_3708 hypothetical protein
YP_002018770.1	KEGG: cch:Cag_1231 hypothetical protein
YP_002018771.1	KEGG: cph:Cpha266_1921 hypothetical protein
YP_002018773.1	PFAM: glycoside hydrolase family 16; SMART: TIR protein; KEGG: cph:Cpha266_0902 protein of unknown function DUF323
YP_002018774.1	KEGG: cph:Cpha266_0897 hypothetical protein
YP_002018775.1	KEGG: rbo:A1I_02975 hypothetical protein
YP_002018776.1	PFAM: protein of unknown function DUF323; KEGG: cph:Cpha266_0900 protein of unknown function DUF323
YP_002018777.1	PFAM: protein of unknown function DUF323; KEGG: cph:Cpha266_0900 protein of unknown function DUF323
YP_002018778.1	PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cph:Cpha266_0899 ATPase associated with various cellular activities, AAA_5
YP_002018779.1	KEGG: cph:Cpha266_0898 hypothetical protein
YP_002018780.1	KEGG: rbo:A1I_02975 hypothetical protein
YP_002018782.1	nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex
YP_002018783.1	PFAM: nitrogen regulatory protein P-II; KEGG: pvi:Cvib_1344 nitrogen regulatory protein P-II
YP_002018784.1	PFAM: nitrogen regulatory protein P-II; KEGG: cte:CT1535 nitrogen regulatory protein, P-II family
YP_002018785.1	KEGG: cph:Cpha266_0741 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1
YP_002018786.1	KEGG: cph:Cpha266_0740 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1
YP_002018787.1	KEGG: cch:Cag_1249 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1
YP_002018788.1	PFAM: oxidoreductase/nitrogenase component 1; KEGG: cph:Cpha266_0738 nitrogenase
YP_002018789.1	KEGG: cph:Cpha266_0737 nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB
YP_002018790.1	KEGG: cph:Cpha266_0736 ferredoxin, 2Fe-2S
YP_002018792.1	KEGG: dol:Dole_0644 hypothetical protein
YP_002018793.1	KEGG: cte:CT1002 hypothetical protein
YP_002018794.1	KEGG: cph:Cpha266_1572 hypothetical protein
YP_002018795.1	metalloprotease
YP_002018796.1	KEGG: pvi:Cvib_0760 cytochrome c family protein
YP_002018797.1	PFAM: cytochrome B561; KEGG: plt:Plut_1198 hydrogenase, b-type cytochrome subunit
YP_002018798.1	KEGG: cph:Cpha266_2106 hypothetical protein
YP_002018799.1	KEGG: plt:Plut_0716 hypothetical protein
YP_002018800.1	PFAM: Domain of unknown function DUF1814; KEGG: plt:Plut_0717 hypothetical protein
YP_002018801.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: cch:Cag_1938 Sel1-like repeat
YP_002018802.1	KEGG: cph:Cpha266_1695 hypothetical protein
YP_002018803.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: net:Neut_2415 filamentation induced by cAMP protein Fic
YP_002018804.1	PFAM: hypothetical protein-containing protein; hypothetical protein; KEGG: cte:CT1461 kinesin light chain-related protein
YP_002018805.1	PFAM: protein of unknown function DUF323; KEGG: cph:Cpha266_1490 protein of unknown function DUF323
YP_002018806.1	KEGG: cph:Cpha266_2243 hypothetical protein
YP_002018807.1	KEGG: cph:Cpha266_1490 protein of unknown function DUF323
YP_002018808.1	PFAM: type III restriction protein res subunit; KEGG: mca:MCA0026 type III restriction-modification system, R subunit
YP_002018809.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: btr:Btr_1180 methyltransferase
YP_002018811.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: cph:Cpha266_1951 plasmid maintenance system antidote protein, XRE family
YP_002018812.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cph:Cpha266_1953 helicase domain protein
YP_002018814.1	KEGG: plt:Plut_1351 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002018815.1	TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: cph:Cpha266_0735 transcriptional regulator, ModE family
YP_002018816.1	TIGRFAM: TonB family protein; KEGG: plt:Plut_1585 TonB-like
YP_002018817.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1755 ABC transporter, ATP-binding protein
YP_002018818.1	PFAM: cobalamin synthesis protein P47K; KEGG: cte:CT1756 hypothetical protein
YP_002018819.1	KEGG: cte:CT1757 hypothetical protein
YP_002018820.1	PFAM: periplasmic binding protein; KEGG: cph:Cpha266_0448 periplasmic binding protein
YP_002018821.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sat:SYN_01058 TonB dependent receptor family
YP_002018822.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_0446 ABC transporter related
YP_002018823.1	PFAM: transport system permease; KEGG: cph:Cpha266_0445 transport system permease
YP_002018824.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cph:Cpha266_0438 ABC transporter related
YP_002018825.1	PFAM: TOBE domain protein; KEGG: cph:Cpha266_0439 TOBE domain protein
YP_002018826.1	KEGG: cph:Cpha266_0440 TonB-dependent receptor
YP_002018827.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: cph:Cpha266_0441 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_002018828.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cph:Cpha266_0442 transcriptional regulator, Fis family
YP_002018829.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: plt:Plut_1551 cysteine synthase K/M/A
YP_002018830.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cph:Cpha266_0732 cystathionine gamma-synthase
YP_002018831.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: cph:Cpha266_0731 thiamine biosynthesis protein ThiS
YP_002018832.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_002018833.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center
YP_002018834.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: cph:Cpha266_0728 UBA/ThiF-type NAD/FAD binding protein
YP_002018835.1	KEGG: gfo:GFO_1511 conserved hypothetical protein, membrane
YP_002018836.1	KEGG: cch:Cag_0872 hypothetical protein
YP_002018837.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cch:Cag_0873 hypothetical protein
YP_002018838.1	KEGG: rso:RS01674 probable transmembrane protein
YP_002018839.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_002018840.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: reu:Reut_A2046 dihydrolipoamide acetyltransferase
YP_002018841.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rso:RSc1271 dihydrolipoamide dehydrogenase
YP_002018842.1	KEGG: cph:Cpha266_2243 hypothetical protein
YP_002018843.1	PFAM: inner-membrane translocator; KEGG: amt:Amet_4117 inner-membrane translocator
YP_002018844.1	PFAM: inner-membrane translocator; KEGG: cpy:Cphy_3535 inner-membrane translocator
YP_002018845.1	KEGG: cph:Cpha266_2243 hypothetical protein
YP_002018846.1	KEGG: dsh:Dshi_3149 peptidase M15D VanX D-ala-D-ala dipeptidase
YP_002018847.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rca:Rcas_2450 radical SAM protein
YP_002018849.1	KEGG: pyo:PY02104 rhoptry protein Pfam: ATP-synt_E_2 Myosin_tail_1 DUF1374 MttA_Hcf106 AIP3 FCH DUF148    RasGAP Phg_2220_C MACPF VAR1 EAP30 Syntaxin-6_N PROSITE: ASN_RICH LYS_RICH PHE_RICH
YP_002018850.1	PFAM: Extracellular ligand-binding receptor; KEGG: cbf:CLI_0539  high-affinity branched-chain amino acid ABC transporter, amino acid-binding protein
YP_002018851.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bad:BAD_0447 ATP binding protein of ABC transporter for branched-chain amino acids
YP_002018852.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cjd:JJD26997_0773 high affinity branched-chain amino acid ABC transporter, ATP-binding protein
YP_002018855.1	PFAM: transposase IS4 family protein; KEGG: mar:MAE_30320 transposase
YP_002018856.1	PFAM: plasmid maintenance system killer; KEGG: hne:HNE_2665 plasmid maintenance system killer protein
YP_002018857.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: sen:SACE_0851 plasmid maintenance system antidote protein
YP_002018859.1	KEGG: mar:MAE_40420 hypothetical protein
YP_002018860.1	PFAM: Protein of unkown function DUF1819  inner membrane; KEGG: swo:Swol_0988 hypothetical protein
YP_002018861.1	KEGG: swo:Swol_0989 hypothetical protein
YP_002018862.1	KEGG: swo:Swol_0990 hypothetical protein
YP_002018863.1	KEGG: swo:Swol_0997 hypothetical protein
YP_002018864.1	PFAM: protein of unknown function DUF1016; KEGG: cch:Cag_0874 hypothetical protein
YP_002018865.1	PFAM: PglZ domain protein; KEGG: swo:Swol_0998 hypothetical protein
YP_002018866.1	KEGG: swo:Swol_0999 ATP-dependent protease La
YP_002018868.1	KEGG: mgm:Mmc1_0221 hypothetical protein
YP_002018869.1	KEGG: mar:MAE_56120 hypothetical protein
YP_002018870.1	PFAM: HipA domain protein; KEGG: cch:Cag_1275 hypothetical protein
YP_002018871.1	PFAM: helix-turn-helix domain protein; KEGG: cch:Cag_1274 transcriptional regulator, XRE family
YP_002018872.1	TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: cph:Cpha266_0725 hydrogenase expression/formation protein HypE
YP_002018873.1	TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: plt:Plut_1455 hydrogenase formation HypD protein
YP_002018874.1	TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: cph:Cpha266_0723 hydrogenase assembly chaperone HypC/HupF
YP_002018875.1	TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: cch:Cag_0533 hydrogenase maturation protein HypF
YP_002018876.1	TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: cph:Cpha266_0721 hydrogenase accessory protein HypB
YP_002018877.1	TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: plt:Plut_1459 hydrogenase expression/synthesis, HypA
YP_002018879.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_002018880.1	KEGG: cph:Cpha266_0718 hypothetical protein
YP_002018881.1	PFAM: NUDIX hydrolase; KEGG: cph:Cpha266_0717 NUDIX hydrolase
YP_002018883.1	KEGG: cph:Cpha266_0714 hypothetical protein
YP_002018884.1	PFAM: UspA domain protein; KEGG: cph:Cpha266_0713 UspA domain protein
YP_002018885.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cch:Cag_1339  sugar transport protein
YP_002018886.1	KEGG: cch:Cag_1340 hypothetical protein
YP_002018887.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_002018889.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_0709 hypothetical protein
YP_002018890.1	KEGG: cch:Cag_1345 quinate/shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein
YP_002018891.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_002018892.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: cph:Cpha266_0706 hydrolase, TatD family
YP_002018893.1	KEGG: cch:Cag_1348 hypothetical protein
YP_002018894.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: cph:Cpha266_0704 peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_002018895.1	PFAM: alanine racemase domain protein; KEGG: pvi:Cvib_0534 alanine racemase domain protein
YP_002018896.1	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation
YP_002018897.1	KEGG: cch:Cag_1355 initiation factor 2B alpha/beta/delta; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related
YP_002018898.1	PFAM: cytochrome c oxidase subunit I; KEGG: cch:Cag_1356 cytochrome-cbb3 oxidase, subunit I
YP_002018899.1	CcoO; FixO
YP_002018900.1	KEGG: afw:Anae109_1221 hypothetical protein
YP_002018901.1	PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III
YP_002018902.1	KEGG: cch:Cag_1359 polyferredoxin-like
YP_002018903.1	KEGG: cch:Cag_1367 hypothetical protein
YP_002018904.1	KEGG: cch:Cag_1368 hypothetical protein
YP_002018905.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: cch:Cag_1369 heavy metal translocating P-type ATPase
YP_002018906.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: cch:Cag_1370 cytochrome oxidase maturation protein cbb3-type
YP_002018907.1	KEGG: cch:Cag_1371 hypothetical protein
YP_002018908.1	KEGG: cch:Cag_0710 hypothetical protein
YP_002018909.1	TIGRFAM: preprotein translocase, SecG subunit; KEGG: cph:Cpha266_0931 preprotein translocase subunit SecG
YP_002018910.1	KEGG: cch:Cag_1532 hypothetical protein
YP_002018911.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_002018912.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
YP_002018913.1	KEGG: cph:Cpha266_0927 hypothetical protein
YP_002018914.1	KEGG: cch:Cag_1543 hypothetical protein
YP_002018915.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_002018916.1	PFAM: NUDIX hydrolase; KEGG: cph:Cpha266_0924 NUDIX hydrolase
YP_002018917.1	PFAM: Nucleotidyl transferase; KEGG: plt:Plut_0673 glucose-1-phosphate thymidylyltransferase
YP_002018918.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_002018919.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_002018920.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: cph:Cpha266_0920 phosphoribosylanthranilate isomerase
YP_002018921.1	PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0919 alpha/beta hydrolase fold
YP_002018922.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: plt:Plut_0668 glutathione-regulated potassium-efflux system protein KefC
YP_002018924.1	PFAM: RNP-1 like RNA-binding protein; KEGG: cch:Cag_1551 RNA-binding region RNP-1 (RNA recognition motif)
YP_002018925.1	KEGG: cch:Cag_1552 hypothetical protein
YP_002018926.1	TIGRFAM: yecA family protein; KEGG: cph:Cpha266_0914 YecA family protein
YP_002018927.1	TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cph:Cpha266_0913 sulfate transporter
YP_002018928.1	KEGG: cch:Cag_1554 hypothetical protein
YP_002018929.1	TIGRFAM: nitrogenase-associated protein; KEGG: cph:Cpha266_0911 nitrogenase-associated protein
YP_002018930.1	KEGG: cph:Cpha266_0910 hypothetical protein
YP_002018931.1	PFAM: protein of unknown function DUF296; KEGG: cte:CT0707 hypothetical protein
YP_002018932.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_1251 DEAD/DEAH box helicase domain protein
YP_002018933.1	PFAM: protein of unknown function DUF45; KEGG: plt:Plut_0661 zinc protease
YP_002018934.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: plt:Plut_1548 cystathionine gamma-synthase
YP_002018935.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pvi:Cvib_0153 RNA-directed DNA polymerase
YP_002018936.1	KEGG: eba:ebA7204 predicted transposase
YP_002018937.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cte:CT2121 methyltransferase
YP_002018938.1	PFAM: protein of unknown function UPF0150; KEGG: mar:MAE_62810 hypothetical protein
YP_002018939.1	KEGG: mar:MAE_62820 hypothetical protein
YP_002018940.1	PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: jan:Jann_3724 methyltransferase type 11
YP_002018942.1	KEGG: cch:Cag_1343 hypothetical protein
YP_002018944.1	KEGG: gur:Gura_1011 protein of unknown function DUF1016
YP_002018945.1	KEGG: bxe:Bxe_A0223  HsdS protein
YP_002018946.1	KEGG: gur:Gura_4113  transcriptional regulator
YP_002018947.1	PFAM: protein of unknown function DUF891; KEGG: cph:Cpha266_0649 protein of unknown function DUF891
YP_002018948.1	PFAM: helix-turn-helix domain protein; KEGG: cch:Cag_0381 transcriptional regulator, XRE family
YP_002018949.1	KEGG: mca:MCA2686 hypothetical protein
YP_002018950.1	KEGG: mca:MCA2685 hypothetical protein
YP_002018951.1	KEGG: ent:Ent638_1352 hypothetical protein
YP_002018953.1	KEGG: mar:MAE_02430 hypothetical protein
YP_002018954.1	KEGG: vei:Veis_0099 hypothetical protein
YP_002018955.1	KEGG: vei:Veis_0100 hypothetical protein
YP_002018956.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: mca:MCA2682 prophage LambdaMc01, helicase, SNF2 family
YP_002018957.1	PFAM: RES domain protein; KEGG: neu:NE0745 hypothetical protein
YP_002018959.1	KEGG: bcm:Bcenmc03_5097 hypothetical protein
YP_002018960.1	KEGG: cph:Cpha266_1621 hypothetical protein
YP_002018961.1	KEGG: cph:Cpha266_2116 hypothetical protein
YP_002018962.1	PFAM: protein of unknown function DUF179; KEGG: cph:Cpha266_0885 protein of unknown function DUF179
YP_002018963.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cch:Cag_1602 bacterioferritin comigratory protein, thiol peroxidase
YP_002018964.1	PFAM: NUDIX hydrolase; KEGG: cph:Cpha266_0883 NUDIX hydrolase
YP_002018965.1	KEGG: cph:Cpha266_1549 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002018966.1	KEGG: cph:Cpha266_0879 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_002018967.1	KEGG: cch:Cag_1882 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_002018968.1	PFAM: ferredoxin; KEGG: cph:Cpha266_0877 ferredoxin
YP_002018969.1	PFAM: ferredoxin; KEGG: pvi:Cvib_1151 ferredoxin
YP_002018970.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: cph:Cpha266_0875 L-alanine dehydrogenase
YP_002018971.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cch:Cag_1888 carotenoid isomerase
YP_002018972.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
YP_002018973.1	KEGG: plt:Plut_0624 hypothetical protein
YP_002018974.1	PFAM: regulatory protein ArsR; KEGG: plt:Plut_0623  transcriptional regulator, ArsR family
YP_002018975.1	PFAM: heat shock protein Hsp20; KEGG: cch:Cag_1892 heat shock protein, HSP20 family
YP_002018976.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_002018977.1	KEGG: cph:Cpha266_0863 photosystem P840 reaction center protein PscD
YP_002018978.1	TIGRFAM: tol-pal system protein YbgF; KEGG: cph:Cpha266_0862 membrane lipoprotein lipid attachment site
YP_002018979.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: plt:Plut_0616 peptidoglycan-associated lipoprotein
YP_002018980.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: cph:Cpha266_0860 OmpA/MotB domain protein
YP_002018981.1	PFAM: WD40 domain protein beta Propeller; KEGG: pvi:Cvib_1164 WD40 domain protein beta propeller
YP_002018982.1	KEGG: cph:Cpha266_0858 transcriptional regulator, Fis family
YP_002018983.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plt:Plut_0612 ExbD/TolR family protein
YP_002018984.1	TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: cph:Cpha266_0856 MotA/TolQ/ExbB proton channel
YP_002018985.1	PFAM: phosphatidate cytidylyltransferase; protein of unknown function DUF92 transmembrane; KEGG: cph:Cpha266_0855 protein of unknown function DUF92, transmembrane
YP_002018987.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_002018988.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cph:Cpha266_0853 acetolactate synthase, large subunit
YP_002018989.1	KEGG: cph:Cpha266_1549 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002018991.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_002018992.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_002018993.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_002018994.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_002018995.1	KEGG: cch:Cag_1900 3-isopropylmalate dehydratase; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein
YP_002018996.1	TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: cph:Cpha266_0847 3-isopropylmalate dehydratase, small subunit
YP_002018997.1	TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cch:Cag_1898  alpha-isopropylmalate/homocitrate synthase family transferase
YP_002018998.1	KEGG: cch:Cag_1724 hypothetical protein
YP_002019000.1	KEGG: tbd:Tbd_2422 hypothetical protein
YP_002019001.1	KEGG: tbd:Tbd_2422 hypothetical protein
YP_002019002.1	TIGRFAM: prevent-host-death family protein; KEGG: tbd:Tbd_2423 prevent-host-death protein
YP_002019003.1	PFAM: Lipocalin family protein; KEGG: cph:Cpha266_0694 lipocalin family protein
YP_002019004.1	PFAM: protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_0457  signal transduction protein with NACHT domain
YP_002019005.1	KEGG: dol:Dole_1759 prevent-host-death family protein
YP_002019006.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: cph:Cpha266_0459 hypothetical protein
YP_002019007.1	KEGG: cph:Cpha266_0458 hypothetical protein
YP_002019008.1	PFAM: protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_0457  signal transduction protein with NACHT domain
YP_002019009.1	PFAM: plasmid stabilization system; KEGG: cch:Cag_0909 hypothetical protein
YP_002019010.1	TIGRFAM: prevent-host-death family protein; KEGG: cch:Cag_0908 prevent-host-death protein
YP_002019011.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cph:Cpha266_1518 DNA methylase N-4/N-6 domain protein
YP_002019012.1	KEGG: cph:Cpha266_0908 hypothetical protein
YP_002019013.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cph:Cpha266_0693 cation diffusion facilitator family transporter
YP_002019014.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_002019015.1	KEGG: plt:Plut_1792 hypothetical protein
YP_002019016.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: pvi:Cvib_0514 phosphoesterase, PA-phosphatase related
YP_002019017.1	PFAM: glycosyl transferase family 39; KEGG: cph:Cpha266_0690 glycosyl transferase, family 39
YP_002019018.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_0689 glycosyl transferase, family 2
YP_002019019.1	PFAM: conserved hypothetical protein; KEGG: cph:Cpha266_0688 hypothetical protein
YP_002019020.1	KEGG: pvi:Cvib_1533 porin, opacity type
YP_002019021.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cph:Cpha266_0687 single-stranded-DNA-specific exonuclease RecJ
YP_002019022.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_002019023.1	PFAM: metallophosphoesterase; KEGG: cch:Cag_1605 hypothetical protein
YP_002019024.1	PFAM: AAA-4 family protein; KEGG: cch:Cag_0166  transcriptional regulator
YP_002019025.1	KEGG: cph:Cpha266_0681 hypothetical protein
YP_002019027.1	KEGG: cph:Cpha266_0680 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type
YP_002019028.1	KEGG: cph:Cpha266_0679 enoyl-[acyl-carrier-protein] reductase [NADH]
YP_002019029.1	KEGG: plt:Plut_0457 anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase
YP_002019030.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_002019031.1	PFAM: nitroreductase; KEGG: plt:Plut_0455 nitroreductase family protein
YP_002019032.1	KEGG: cph:Cpha266_0675 hypothetical protein
YP_002019033.1	PFAM: UvrD/REP helicase; KEGG: cch:Cag_1415 DNA helicase II
YP_002019034.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: plt:Plut_0452 alpha amylase, catalytic subdomain
YP_002019035.1	PFAM: protein of unknown function UPF0047; KEGG: cch:Cag_1417 hypothetical protein
YP_002019036.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_002019037.1	PFAM: phosphatidylglycerophosphatase A; KEGG: cph:Cpha266_0670 phosphatidylglycerophosphatase
YP_002019038.1	TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cch:Cag_1419 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_002019039.1	PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; KEGG: cph:Cpha266_0668 Smr protein/MutS2
YP_002019040.1	KEGG: neu:NE0822 hypothetical protein
YP_002019041.1	PFAM: RES domain protein; KEGG: neu:NE0821 hypothetical protein
YP_002019042.1	PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_2159 hypothetical protein
YP_002019043.1	PFAM: HipA domain protein; KEGG: aba:Acid345_2426 HipA-like protein
YP_002019045.1	PFAM: transposase IS4 family protein; KEGG: mar:MAE_30320 transposase
YP_002019046.1	KEGG: nma:NMA0936 hypothetical protein
YP_002019047.1	KEGG: nmn:NMCC_0685 hypothetical protein
YP_002019049.1	PFAM: protein of unknown function UPF0150; KEGG: mhu:Mhun_2716 protein of unknown function UPF0150
YP_002019050.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sas:pSAS13 hypothetical protein
YP_002019051.1	KEGG: pfa:PFI1280c protein kinase
YP_002019052.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: gur:Gura_4390 site-specific DNA-methyltransferase (adenine-specific)
YP_002019053.1	KEGG: mem:Memar_0416  transcriptional regulator
YP_002019054.1	PFAM: protein of unknown function DUF891; KEGG: eba:ebD106 hypothetical protein, phage-related
YP_002019055.1	PFAM: helix-turn-helix domain protein; KEGG: plt:Plut_0827 transcriptional regulator, XRE family
YP_002019056.1	KEGG: cph:Cpha266_0634  transcriptional regulator
YP_002019057.1	KEGG: cch:Cag_0692 hypothetical protein
YP_002019058.1	KEGG: gur:Gura_0590 hypothetical protein
YP_002019059.1	PFAM: RES domain protein; KEGG: gur:Gura_0589 hypothetical protein
YP_002019060.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_002019061.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_002019062.1	phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_002019063.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cch:Cag_0481 phosphoesterase PHP-like
YP_002019064.1	PFAM: protein of unknown function DUF140; KEGG: pvi:Cvib_0490 protein of unknown function DUF140
YP_002019065.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_0441 ATPase
YP_002019066.1	PFAM: Mammalian cell entry related domain protein; KEGG: cch:Cag_0478 VpsC protein
YP_002019067.1	PFAM: beta-lactamase; KEGG: cte:CT0324 D-alanyl-D-alanine carboxypeptidease
YP_002019068.1	PFAM: amine oxidase; Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cph:Cpha266_0659 Rieske (2Fe-2S) domain protein
YP_002019069.1	PFAM: domain of unknown function DUF1730; KEGG: cch:Cag_0255 iron-sulfur cluster-binding protein
YP_002019070.1	KEGG: dde:Dde_3749 ATPase domain protein
YP_002019071.1	involved in de novo purine biosynthesis
YP_002019072.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: gka:GKP41 hypothetical protein
YP_002019073.1	SMART: LamG domain protein jellyroll fold domain protein; KEGG: afm:AFUA_8G07170 hypothetical protein
YP_002019076.1	PFAM: protein of unknown function DUF1105; KEGG: lil:LB146 hypothetical protein
YP_002019077.1	PFAM: N-acetyltransferase; KEGG: cph:Cpha266_1973 N-acetyltransferase
YP_002019078.1	KEGG: cph:Cpha266_1559 hypothetical protein
YP_002019080.1	KEGG: cau:Caur_0439 hypothetical protein
YP_002019081.1	TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: cte:CT1232 geranylgeranyl hydrogenase BchP
YP_002019083.1	KEGG: dol:Dole_0659 hypothetical protein
YP_002019084.1	PFAM: protein of unknown function DUF497; KEGG: syn:ssr0757 hypothetical protein
YP_002019085.1	TIGRFAM: addiction module antidote protein; KEGG: noc:Noc_0569 transcriptional regulator, Cro/CI family
YP_002019087.1	KEGG: mhu:Mhun_0713 hypothetical protein
YP_002019089.1	KEGG: net:Neut_0161 ATP-binding region, ATPase-like
YP_002019090.1	KEGG: noc:Noc_0061 hypothetical protein
YP_002019091.1	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: cch:Cag_0504 phosphoribosylglycinamide formyltransferase
YP_002019092.1	PFAM: radical SAM protein; KEGG: cph:Cpha266_1979 radical SAM protein
YP_002019093.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_1980 glycosyl transferase, family 2
YP_002019094.1	Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues
YP_002019095.1	PFAM: protein of unknown function DUF214; KEGG: cph:Cpha266_1982 cell division protein FtsX
YP_002019096.1	KEGG: cph:Cpha266_1983 hypothetical protein
YP_002019097.1	TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; KEGG: cph:Cpha266_1989 amidophosphoribosyltransferase
YP_002019098.1	KEGG: plt:Plut_0424 transcriptional regulators, TraR/DksA family
YP_002019099.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin)
YP_002019100.1	KEGG: cch:Cag_0522 hypothetical protein
YP_002019101.1	KEGG: cch:Cag_0518 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_002019102.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: plt:Plut_0420 UDP-glucose 4-epimerase
YP_002019103.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cch:Cag_0516 dTDP-glucose 4,6-dehydratase
YP_002019104.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cch:Cag_0515 dTDP-4-dehydrorhamnose reductase
YP_002019106.1	KEGG: cch:Cag_1240 hypothetical protein
YP_002019107.1	KEGG: hbu:Hbut_1342 hypothetical protein
YP_002019108.1	KEGG: cph:Cpha266_0295 hypothetical protein
YP_002019110.1	KEGG: cte:CT1122 hypothetical protein
YP_002019111.1	KEGG: cch:Cag_0514 dTDP-4-dehydrorhamnose 3,5-epimerase related; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_002019112.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pvi:Cvib_0468 glucose-1-phosphate thymidylyltransferase
YP_002019115.1	PFAM: Bile acid:sodium symporter; KEGG: cch:Cag_0408 sodium/bile acid symporter family protein
YP_002019116.1	KEGG: dar:Daro_2807 acetyl-CoA hydrolase/transferase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase
YP_002019117.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_002019118.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cph:Cpha266_0142 uroporphyrinogen-III C-methyltransferase
YP_002019119.1	KEGG: cph:Cpha266_0141 porphyrin biosynthesis protein
YP_002019121.1	PFAM: Polysulphide reductase NrfD; KEGG: cph:Cpha266_0140 polysulphide reductase, NrfD
YP_002019122.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_0139 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_002019123.1	KEGG: cch:Cag_1946 hypothetical protein
YP_002019124.1	KEGG: cch:Cag_1947 DsrK protein
YP_002019125.1	PFAM: Nitrate reductase gamma subunit; KEGG: cph:Cpha266_0136 nitrate reductase, gamma subunit
YP_002019126.1	KEGG: cch:Cag_1949 hypothetical protein
YP_002019127.1	TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: cph:Cpha266_0134 DsrH family protein
YP_002019128.1	TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein; KEGG: cph:Cpha266_0133 DsrE family protein
YP_002019129.1	TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein; KEGG: cph:Cpha266_0132 DsrE family protein
YP_002019130.1	KEGG: cph:Cpha266_0131 hypothetical protein
YP_002019131.1	unknown function
YP_002019132.1	KEGG: cph:Cpha266_0129 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region
YP_002019133.1	KEGG: cph:Cpha266_0128 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region
YP_002019134.1	TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: cch:Cag_1957 sulfite reductase, dissimilatory-type, gamma subunit
YP_002019135.1	TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: cph:Cpha266_0126 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase
YP_002019136.1	PFAM: SirA family protein; KEGG: cph:Cpha266_0125 SirA family protein
YP_002019137.1	PFAM: Rhodanese domain protein; KEGG: cch:Cag_1960 rhodanese-like
YP_002019138.1	KEGG: cph:Cpha266_0123 hypothetical protein
YP_002019139.1	KEGG: cch:Cag_1962 hypothetical protein
YP_002019140.1	PFAM: protein of unknown function DUF81; KEGG: cch:Cag_1963 hypothetical protein
YP_002019141.1	SMART: Rhodanese domain protein; KEGG: cch:Cag_0955 rhodanese-like
YP_002019142.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cph:Cpha266_0843 membrane protein involved in aromatic hydrocarbon degradation
YP_002019143.1	KEGG: plt:Plut_0415 hypothetical protein
YP_002019144.1	KEGG: cph:Cpha266_1999 hypothetical protein
YP_002019145.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_2000 short-chain dehydrogenase/reductase SDR
YP_002019146.1	PFAM: ribulose bisphosphate carboxylase large chain; KEGG: plt:Plut_0412 ribulose-bisphosphate carboxylase
YP_002019147.1	PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cch:Cag_1641 aldolase
YP_002019148.1	PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KEGG: cch:Cag_1642 short chain dehydrogenase
YP_002019149.1	KEGG: plt:Plut_0409 hypothetical protein
YP_002019150.1	PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: plt:Plut_0408 2-vinyl bacteriochlorophyllide hydratase
YP_002019151.1	PFAM: metallophosphoesterase; protein of unknown function DUF323; SEFIR domain protein; KEGG: cph:Cpha266_0068 protein of unknown function DUF323
YP_002019152.1	TIGRFAM: addiction module component, TIGR02574 family; PFAM:  addiction module component CHP02574 family protein; KEGG: cte:CT1521 hypothetical protein
YP_002019153.1	KEGG: cch:Cag_1695 reverse transcriptase family protein
YP_002019154.1	PFAM: HRDC domain protein; KEGG: cch:Cag_1694 HRDC
YP_002019155.1	PFAM: metallophosphoesterase; protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_1893 protein of unknown function DUF323
YP_002019156.1	KEGG: cph:Cpha266_2183 hypothetical protein
YP_002019158.1	KEGG: cph:Cpha266_2183 hypothetical protein
YP_002019159.1	PFAM: metallophosphoesterase; protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_1893 protein of unknown function DUF323
YP_002019160.1	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities
YP_002019161.1	Catalyzes the phosphorylation of UMP to UDP
YP_002019162.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_002019163.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_002019164.1	forms a direct contact with the tRNA during translation
YP_002019165.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_002019166.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_002019167.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cph:Cpha266_2014 protein of unknown function DUF59
YP_002019168.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: plt:Plut_0398 NifU protein
YP_002019169.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: cph:Cpha266_2016 cell divisionFtsK/SpoIIIE
YP_002019170.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_002019171.1	KEGG: noc:Noc_0351 hypothetical protein
YP_002019172.1	PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1771 hypothetical protein
YP_002019173.1	PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1773 hypothetical protein
YP_002019174.1	KEGG: cph:Cpha266_2023 metal dependent phosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_002019175.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_002019177.1	PFAM: peptidase M16 domain protein; KEGG: cph:Cpha266_2025 peptidase M16 domain protein
YP_002019178.1	PFAM: permease YjgP/YjgQ family protein; KEGG: cch:Cag_0302 hypothetical protein
YP_002019179.1	PFAM: protein of unknown function DUF62; KEGG: cch:Cag_0301 hypothetical protein
YP_002019180.1	KEGG: gur:Gura_1460 hypothetical protein
YP_002019181.1	TIGRFAM: addiction module component, TIGR02574 family; PFAM:  addiction module component CHP02574 family protein; KEGG: gsu:GSU0056 hypothetical protein
YP_002019183.1	KEGG: amt:Amet_0300 hypothetical protein
YP_002019184.1	KEGG: amt:Amet_0301 hypothetical protein
YP_002019185.1	KEGG: cph:Cpha266_1718 hypothetical protein
YP_002019186.1	PFAM: protein of unknown function DUF323; KEGG: cph:Cpha266_0902 protein of unknown function DUF323
YP_002019187.1	KEGG: cph:Cpha266_2183 hypothetical protein
YP_002019188.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pvi:Cvib_0443 RNA polymerase, sigma 32 subunit, RpoH
YP_002019189.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_002019190.1	KEGG: plt:Plut_0385 peptidase S14, ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP
YP_002019191.1	flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor
YP_002019192.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: cph:Cpha266_2032 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
YP_002019193.1	PFAM: surface antigen (D15); Patatin; KEGG: pvi:Cvib_0421 surface antigen (D15)
YP_002019194.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_002019195.1	KEGG: cch:Cag_0292 hypothetical protein
YP_002019196.1	KEGG: cph:Cpha266_2036 transcriptional regulator, Fis family
YP_002019197.1	KEGG: plt:Plut_0358 hypothetical protein
YP_002019198.1	PFAM: conserved hypothetical protein; KEGG: pvi:Cvib_0416 conserved hypothetical protein 730
YP_002019199.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
YP_002019200.1	KEGG: cch:Cag_0299 hypothetical protein
YP_002019201.1	KEGG: xom:XOO_3260 hypothetical protein
YP_002019202.1	PFAM: protein of unknown function DUF1016; KEGG: dol:Dole_2094 protein of unknown function DUF1016
YP_002019203.1	PFAM: diacylglycerol kinase catalytic region; KEGG: cph:Cpha266_2039 diacylglycerol kinase, catalytic region
YP_002019204.1	KEGG: cph:Cpha266_2043 hypothetical protein
YP_002019205.1	PFAM: Aldehyde Dehydrogenase_; KEGG: cph:Cpha266_2070 aldehyde dehydrogenase
YP_002019206.1	TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: pvi:Cvib_0411 ribosome small subunit-dependent GTPase A
YP_002019207.1	catalyzes branch migration in Holliday junction intermediates
YP_002019208.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_002019209.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_002019210.1	KEGG: nha:Nham_0574 antirestriction protein
YP_002019211.1	PFAM: transposase IS200-family protein; KEGG: amr:AM1_C0253 transposase, IS200-family
YP_002019212.1	KEGG: fps:FP1992 DNA recombination protein RmuC
YP_002019214.1	PFAM: protein of unknown function DUF497; KEGG: rpe:RPE_1776 protein of unknown function DUF497
YP_002019215.1	KEGG: rpe:RPE_1775 hypothetical protein
YP_002019216.1	TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: cph:Cpha266_2075 chlorophyllide reductase subunit Y
YP_002019217.1	PFAM: Sporulation domain protein; KEGG: cph:Cpha266_2076 sporulation domain protein
YP_002019218.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_002019219.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_002019220.1	PFAM: protein of unknown function DUF167; KEGG: cph:Cpha266_2081 protein of unknown function DUF167
YP_002019221.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
YP_002019222.1	KEGG: cph:Cpha266_2083 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase
YP_002019223.1	PFAM: OmpA/MotB domain protein; KEGG: cph:Cpha266_2084 OmpA/MotB domain protein
YP_002019224.1	KEGG: cch:Cag_0316 hypothetical protein
YP_002019225.1	PFAM: Heavy metal transport/detoxification protein; KEGG: cph:Cpha266_2086 heavy metal transport/detoxification protein
YP_002019226.1	PFAM: hypothetical protein-containing protein; Tetratricopeptide TPR_3; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: pvi:Cvib_0399 hypothetical protein
YP_002019227.1	TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: pvi:Cvib_0398 isochorismate synthase
YP_002019228.1	TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; KEGG: cch:Cag_1700 menaquinone biosynthesis protein
YP_002019229.1	KEGG: mem:Memar_0122 hypothetical protein
YP_002019230.1	KEGG: mbn:Mboo_1423 PKD domain containing protein
YP_002019231.1	KEGG: rrs:RoseRS_0300 hypothetical protein
YP_002019232.1	PFAM: protein of unknown function DUF323; NACHT nucleoside triphosphatase; KEGG: cph:Cpha266_0460 protein of unknown function DUF323
YP_002019233.1	KEGG: rfe:RF_0889 hypothetical protein
YP_002019234.1	KEGG: cph:Cpha266_2540 hypothetical protein
YP_002019235.1	PFAM: restriction endonuclease; SMART: AAA ATPase; KEGG: cph:Cpha266_0840 ribosome assembly protein 4 (RSA4)
YP_002019236.1	KEGG: lwe:lwe0236 transcriptional regulator, MarR family
YP_002019237.1	PFAM: alpha/beta hydrolase fold; KEGG: cte:CT1845 thioesterase, menaquinone synthesis protein
YP_002019238.1	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA
YP_002019239.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cph:Cpha266_2092 O-succinylbenzoate-CoA synthase
YP_002019240.1	TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: cch:Cag_1672 O-succinylbenzoate-CoA ligase
YP_002019241.1	KEGG: plt:Plut_0325 hypothetical protein
YP_002019242.1	PFAM: dihydrodipicolinate reductase; KEGG: plt:Plut_0324 dihydrodipicolinate reductase
YP_002019243.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cph:Cpha266_2096 chromosome segregation DNA-binding protein
YP_002019244.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cch:Cag_1803 ATPase, ParA family
YP_002019245.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: cph:Cpha266_2099 magnesium transporter
YP_002019246.1	PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: cch:Cag_1800 electron transfer flavoprotein-ubiquinone oxidoreductase
YP_002019247.1	KEGG: cch:Cag_1240 hypothetical protein
YP_002019248.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: cch:Cag_0384 hypothetical protein
YP_002019249.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: xom:XOO_4210 virulence associated protein
YP_002019250.1	TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: cph:Cpha266_2044 CRISPR-associated protein Cas6
YP_002019251.1	KEGG: cph:Cpha266_2045 hypothetical protein
YP_002019252.1	KEGG: cph:Cpha266_2046 CRISPR-associated RAMP protein, Csm5 family
YP_002019253.1	TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; KEGG: cph:Cpha266_2047 CRISPR-associated RAMP protein, Csm4 family
YP_002019254.1	TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324; KEGG: tpt:Tpet_1095 CRISPR-associated RAMP protein, Csm3 family
YP_002019255.1	TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: protein of unknown function DUF310; KEGG: mth:MTH1081 hypothetical protein
YP_002019256.1	TIGRFAM: CRISPR-associated protein, Csm1 family; KEGG: cph:Cpha266_2050 CRISPR-associated protein, Csm1 family
YP_002019257.1	KEGG: mmw:Mmwyl1_2687 hypothetical protein
YP_002019258.1	KEGG: cph:Cpha266_2052 hypothetical protein
YP_002019259.1	TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: cph:Cpha266_2055 CRISPR-associated protein Cas2
YP_002019260.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); protein of unknown function DUF48; KEGG: cph:Cpha266_2054 CRISPR-associated protein Cas1
YP_002019261.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: plt:Plut_1908 hypothetical protein
YP_002019262.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_002019263.1	PFAM: phospholipase/Carboxylesterase; KEGG: plt:Plut_0317 serine esterase
YP_002019264.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_002019265.1	KEGG: cph:Cpha266_1809 metal dependent phosphohydrolase
YP_002019267.1	KEGG: cph:Cpha266_0052 hypothetical protein
YP_002019269.1	KEGG: cph:Cpha266_0202 chlorosome envelope protein B
YP_002019270.1	KEGG: cph:Cpha266_2141 hypothetical protein
YP_002019271.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cph:Cpha266_2142 peptidoglycan-binding domain 1 protein
YP_002019272.1	KEGG: cph:Cpha266_2143 hypothetical protein
YP_002019273.1	KEGG: pvi:Cvib_0378 hypothetical protein
YP_002019274.1	PFAM: protein of unknown function DUF541; KEGG: cph:Cpha266_2145 protein of unknown function DUF541
YP_002019275.1	KEGG: sal:Sala_1348 hypothetical protein
YP_002019276.1	PFAM: NLP/P60 protein; KEGG: cph:Cpha266_1344 NLP/P60 protein
YP_002019277.1	KEGG: mxa:MXAN_0010 CapA family protein
YP_002019278.1	KEGG: fps:FP1905 hypothetical protein
YP_002019279.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: fps:FP1906 probable sugar O-acetyltransferase precursor
YP_002019280.1	KEGG: fps:FP1907 hypothetical protein
YP_002019281.1	KEGG: cph:Cpha266_2147 hypothetical protein
YP_002019282.1	TIGRFAM: 6-phosphogluconolactonase; KEGG: cph:Cpha266_2149 6-phosphogluconolactonase
YP_002019283.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_002019284.1	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate
YP_002019285.1	PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_2155 glycosyl transferase, group 1
YP_002019286.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pvi:Cvib_0364 YbaK/prolyl-tRNA synthetase associated region
YP_002019287.1	KEGG: plt:Plut_0302 outer surface protein
YP_002019288.1	PFAM: Patatin; KEGG: cph:Cpha266_2157 patatin
YP_002019289.1	PFAM: Aldehyde Dehydrogenase_; KEGG: cph:Cpha266_2158 aldehyde dehydrogenase
YP_002019290.1	PFAM: Integral membrane protein TerC; KEGG: cph:Cpha266_2160 integral membrane protein TerC
YP_002019291.1	PFAM: UspA domain protein; KEGG: cph:Cpha266_2161 UspA domain protein
YP_002019292.1	PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cph:Cpha266_2163 tRNA/rRNA methyltransferase (SpoU)
YP_002019293.1	KEGG: cph:Cpha266_2164 hypothetical protein
YP_002019294.1	KEGG: syw:SYNW2410 hypothetical protein
YP_002019295.1	PFAM: peptidase U32; KEGG: cph:Cpha266_2165 peptidase U32
YP_002019296.1	KEGG: cph:Cpha266_2166 hydrogenase/sulfur reductase, beta subunit
YP_002019297.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: cch:Cag_1567 hydrogenase/sulfur reductase, gamma subunit
YP_002019298.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cph:Cpha266_2168 NADH ubiquinone oxidoreductase, 20 kDa subunit
YP_002019299.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: cph:Cpha266_2169 nickel-dependent hydrogenase, large subunit
YP_002019300.1	KEGG: cph:Cpha266_0524 hypothetical protein
YP_002019301.1	TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: psp:PSPPH_B0056 DNA-damage-inducible protein
YP_002019302.1	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: nmu:Nmul_A2035 hypothetical protein
YP_002019303.1	KEGG: cbe:Cbei_2837 plasmid pRiA4b ORF-3 family protein
YP_002019304.1	KEGG: mgm:Mmc1_1577 hypothetical protein
YP_002019305.1	KEGG: dps:DPPB62 hypothetical protein
YP_002019306.1	KEGG: cph:Cpha266_0290 hypothetical protein
YP_002019307.1	KEGG: gur:Gura_1489 hypothetical protein
YP_002019308.1	KEGG: bbr:BB1689 hypothetical protein
YP_002019310.1	KEGG: rpe:RPE_2175 hypothetical protein
YP_002019311.1	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_1405 transcriptional regulator, AbrB family
YP_002019312.1	PFAM: helix-turn-helix domain protein; KEGG: amt:Amet_3370  transcriptional regulator, XRE family
YP_002019313.1	KEGG: plt:Plut_0847 conserved hypothetical protein; conserved domain
YP_002019314.1	KEGG: cph:Cpha266_2628 hypothetical protein
YP_002019315.1	PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: cph:Cpha266_1210 DNA topoisomerase, type IA, zn finger domain protein
YP_002019316.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ccr:CC_2903 cold-shock domain family protein
YP_002019317.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pvi:Cvib_0358 peptidylprolyl isomerase, FKBP-type
YP_002019318.1	PFAM: MscS Mechanosensitive ion channel; KEGG: plt:Plut_0292 hypothetical protein
YP_002019319.1	PFAM: FAD dependent oxidoreductase; KEGG: cph:Cpha266_2269 FAD dependent oxidoreductase
YP_002019320.1	KEGG: cph:Cpha266_2271 acetyltransferase, CysE/LacA/LpxA/NodL family
YP_002019321.1	PFAM: bacteriochlorophyll C binding protein; KEGG: plt:Plut_2013 chlorosome envelope protein E
YP_002019322.1	KEGG: cph:Cpha266_1383 hypothetical protein
YP_002019323.1	KEGG: cph:Cpha266_1384 transposase family protein
YP_002019324.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cch:Cag_0411 AraC family transcripiotnal regulator
YP_002019325.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pvi:Cvib_0353 ABC transporter related
YP_002019326.1	SMART: metal-dependent phosphohydrolase HD region; KEGG: cph:Cpha266_2274 metal dependent phosphohydrolase
YP_002019327.1	KEGG: pvi:Cvib_0351 hypothetical protein
YP_002019328.1	PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1627 3-oxoadipate enol-lactonase
YP_002019329.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_002019330.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_002019331.1	KEGG: plt:Plut_0282 hypothetical protein
YP_002019332.1	PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: plt:Plut_0281 CBS
YP_002019333.1	KEGG: cch:Cag_1635 alanine racemase region; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_002019334.1	SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: cch:Cag_1625 helix-hairpin-helix DNA-binding, class 1
YP_002019335.1	KEGG: cph:Cpha266_2286 hypothetical protein
YP_002019336.1	PFAM: ATPase; KEGG: rms:RMA_0723 archaeal ATPase family protein
YP_002019337.1	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_1405 transcriptional regulator, AbrB family
YP_002019338.1	TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: cph:Cpha266_2287 aspartate semialdehyde dehydrogenase
YP_002019339.1	TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: plt:Plut_0276 dihydrouridine synthase TIM-barrel protein nifR3
YP_002019340.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_002019341.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KR domain protein; KEGG: cph:Cpha266_2290 NAD-dependent epimerase/dehydratase
YP_002019342.1	PFAM: peptidase M16 domain protein; KEGG: cch:Cag_0239 peptidase, M16 family
YP_002019343.1	PFAM: trigger factor domain protein; trigger factor domain; KEGG: pvi:Cvib_0337 trigger factor
YP_002019344.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_002019345.1	KEGG: cph:Cpha266_2293 nicotinate-nucleotide pyrophosphorylase [carboxylating]; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_002019346.1	KEGG: cjr:CJE1434 hypothetical protein
YP_002019347.1	TIGRFAM: dihydroneopterin aldolase; KEGG: pvi:Cvib_0334 dihydroneopterin aldolase
YP_002019348.1	KEGG: plt:Plut_0268 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_002019349.1	PFAM: Anion-transporting ATPase; KEGG: cch:Cag_0217 anion-transporting ATPase
YP_002019350.1	KEGG: cch:Cag_0218 hypothetical protein
YP_002019351.1	PFAM: bacteriochlorophyll C binding protein; KEGG: plt:Plut_0265 chlorosome envelope protein A
YP_002019352.1	KEGG: cch:Cag_0220 chlorosome envelope protein C
YP_002019353.1	KEGG: cph:Cpha266_2301 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase
YP_002019354.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: cph:Cpha266_2302 dihydroorotate oxidase B, electron transfer subunit
YP_002019355.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cch:Cag_0223 single-strand binding protein
YP_002019356.1	TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: pvi:Cvib_0325 DNA polymerase III, delta subunit
YP_002019357.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: cch:Cag_0225 NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein
YP_002019358.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: cch:Cag_0226 8-amino-7-oxononanoate synthase
YP_002019359.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cph:Cpha266_2310 TonB-dependent receptor
YP_002019360.1	KEGG: cph:Cpha266_2311 hydrogenobyrinic acid a,c-diamide cobaltochelatase; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase
YP_002019361.1	KEGG: cph:Cpha266_2312 hypothetical protein
YP_002019362.1	catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis
YP_002019363.1	catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine
YP_002019364.1	KEGG: pvi:Cvib_0316 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB
YP_002019365.1	TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: plasmid stabilization system; Addiction module toxin Txe/YoeB; KEGG: plt:Plut_1930 addiction module toxin, Txe/YoeB
YP_002019366.1	KEGG: cch:Cag_0601 hypothetical protein
YP_002019368.1	PFAM: glycosyl transferase group 1; KEGG: pme:NATL1_21041 hypothetical protein
YP_002019369.1	PFAM: acyltransferase 3; KEGG: sde:Sde_0174 acyltransferase-like
YP_002019370.1	PFAM: glycosyl transferase group 1; KEGG: cch:Cag_0447 hypothetical protein
YP_002019371.1	PFAM: Methyltransferase type 11; KEGG: cch:Cag_1750 hypothetical protein
YP_002019372.1	PFAM: transposase IS4 family protein; KEGG: mar:MAE_30320 transposase
YP_002019373.1	PFAM: Hemolysin-type calcium-binding region; KEGG: ava:Ava_4160 VCBS
YP_002019374.1	PFAM: Hemolysin-type calcium-binding region; KEGG: ret:RHE_CH00724 rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
YP_002019375.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dvl:Dvul_2392 NAD-dependent epimerase/dehydratase
YP_002019376.1	PFAM: glycosyl transferase group 1; KEGG: hau:Haur_1032 glycosyl transferase group 1
YP_002019377.1	PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1481 glycosyltransferase-like
YP_002019378.1	PFAM: glycosyl transferase family 2; KEGG: cch:Cag_1479 glycosyltransferase involved in cell wall biogenesis-like
YP_002019379.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: pvi:Cvib_0671 lipid A biosynthesis acyltransferase
YP_002019380.1	TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: cph:Cpha266_0346 RfaE bifunctional protein
YP_002019381.1	KEGG: cph:Cpha266_0345 hypothetical protein
YP_002019382.1	KEGG: pvi:Cvib_1568 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein
YP_002019383.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: cph:Cpha266_0343 phage SPO1 DNA polymerase-related protein
YP_002019384.1	KEGG: cch:Cag_1608 DnaB helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase
YP_002019385.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: cch:Cag_1607 phosphoenolpyruvate-protein phosphotransferase
YP_002019386.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cph:Cpha266_0340 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_002019387.1	KEGG: cph:Cpha266_0339 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_002019388.1	KEGG: cch:Cag_1211 hypothetical protein
YP_002019389.1	KEGG: cch:Cag_1212 cell division transporter substrate-binding protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_002019390.1	TIGRFAM: thiamine-monophosphate kinase; KEGG: cph:Cpha266_0336 thiamine-monophosphate kinase
YP_002019391.1	PFAM: SMC domain protein; KEGG: rca:Rcas_4237 hypothetical protein
YP_002019392.1	KEGG: maq:Maqu_0563 hypothetical protein
YP_002019393.1	catalyzes the formation of L-tryptophan from indole and L-serine
YP_002019394.1	TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: cch:Cag_0452 fic family protein
YP_002019395.1	PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_0334 ATPase AAA-2 domain protein
YP_002019396.1	KEGG: cph:Cpha266_0333 hypothetical protein
YP_002019397.1	KEGG: cph:Cpha266_0316 hypothetical protein
YP_002019398.1	PFAM: ferric-uptake regulator; KEGG: cph:Cpha266_0314 ferric uptake regulator, Fur family
YP_002019399.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: radical SAM protein; KEGG: pvi:Cvib_0808 anaerobic ribonucleoside-triphosphate reductase activating protein
YP_002019400.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_002019402.1	PFAM: NAD-dependent epimerase/dehydratase; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: cph:Cpha266_0311 NAD-dependent epimerase/dehydratase
YP_002019403.1	KEGG: cte:CT0186 hypothetical protein
YP_002019404.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: cph:Cpha266_2590 glycerol kinase
YP_002019405.1	KEGG: mul:MUL_3181 hypothetical protein
YP_002019406.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: pen:PSEEN4650 hypothetical protein
YP_002019407.1	KEGG: sfr:Sfri_1952 hypothetical protein
YP_002019408.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_1074 ABC transporter related
YP_002019409.1	PFAM: conserved hypothetical protein; KEGG: ppd:Ppro_1073 conserved hypothetical protein 245
YP_002019410.1	KEGG: cch:Cag_1994 hypothetical protein
YP_002019411.1	KEGG: cch:Cag_1995 hypothetical protein
YP_002019412.1	TIGRFAM: addiction module component, TIGR02574 family; PFAM:  addiction module component CHP02574 family protein; KEGG: cph:Cpha266_0253  addiction module component, TIGR02574 family
YP_002019413.1	KEGG: pna:Pnap_1139 hypothetical protein
YP_002019414.1	KEGG: pna:Pnap_1140  ATP-binding protein
YP_002019415.1	KEGG: cch:Cag_1574 hypothetical protein
YP_002019416.1	KEGG: cph:Cpha266_0306 hypothetical protein
YP_002019417.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cph:Cpha266_0305 amine oxidase
YP_002019418.1	PFAM: hypothetical protein; KEGG: cph:Cpha266_0303 DedA protein
YP_002019419.1	PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0302 alpha/beta hydrolase fold
YP_002019420.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: cch:Cag_0590 penicillin-binding protein 1A
YP_002019421.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_002019422.1	PFAM: Rhodanese domain protein; KEGG: gsu:GSU0505 rhodanese-like domain protein
YP_002019424.1	KEGG: mba:Mbar_A1347 hypothetical protein
YP_002019425.1	PFAM: helix-turn-helix domain protein; KEGG: amt:Amet_3370  transcriptional regulator, XRE family
YP_002019426.1	KEGG: cch:Cag_1568 hypothetical protein
YP_002019427.1	KEGG: syn:sll1715 hypothetical protein
YP_002019428.1	KEGG: cph:Cpha266_1944 Legionella vir region protein
YP_002019429.1	KEGG: cph:Cpha266_0294 hypothetical protein
YP_002019430.1	KEGG: dac:Daci_4115 hypothetical protein
YP_002019432.1	KEGG: rpb:RPB_0073 hypothetical protein
YP_002019433.1	KEGG: rpb:RPB_0074 hypothetical protein
YP_002019434.1	KEGG: cph:Cpha266_0265 hypothetical protein
YP_002019435.1	KEGG: cph:Cpha266_0264 hypothetical protein
YP_002019436.1	PFAM:  phosphatase regulatory subunit; KEGG: cac:CA_P0129 glycogen-binding regulatory subunit of S/T protein phosphatase I
YP_002019438.1	KEGG: slo:Shew_2745 hypothetical protein
YP_002019439.1	KEGG: cph:Cpha266_0270 hypothetical protein
YP_002019440.1	KEGG: cph:Cpha266_0250 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase type 3
YP_002019441.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_0246 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_002019442.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cph:Cpha266_0245 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_002019443.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cph:Cpha266_0244 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002019444.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002019445.1	KEGG: pvi:Cvib_1596 hypothetical protein
YP_002019446.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cph:Cpha266_0241 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_002019447.1	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin
YP_002019448.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_002019449.1	PFAM: histone family protein DNA-binding protein; KEGG: plt:Plut_1957 histone-like DNA-binding protein
YP_002019451.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_002019452.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cch:Cag_0360 acetyl-CoA biotin carboxyl carrier
YP_002019453.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: pvi:Cvib_1603 acetyl-CoA carboxylase, biotin carboxylase
YP_002019454.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_002019455.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_002019456.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_002019457.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_002019458.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_002019459.1	binds directly to 23S ribosomal RNA
YP_002019460.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KEGG: cph:Cpha266_0228 transcription antitermination protein NusG
YP_002019461.1	forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_002019462.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_0226 short-chain dehydrogenase/reductase SDR
YP_002019463.1	KEGG: cch:Cag_0349 IspG protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein
YP_002019464.1	PFAM: Septum formation initiator; KEGG: plt:Plut_1971 hypothetical protein
YP_002019465.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_002019466.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002019467.1	PFAM: glycosyl transferase family 2; KEGG: cph:Cpha266_0221 dolichyl-phosphate beta-D-mannosyltransferase
YP_002019468.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cch:Cag_0344 photosystem P840 reaction center iron-sulfur protein
YP_002019469.1	KEGG: cch:Cag_0343 photosystem P840 reaction center, large subunit
YP_002019470.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_002019471.1	KEGG: mem:Memar_0122 hypothetical protein
YP_002019472.1	KEGG: mba:Mbar_A2064 hypothetical protein
YP_002019473.1	KEGG: cch:Cag_0608 hypothetical protein
YP_002019474.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pvi:Cvib_1621 rubredoxin-type Fe(Cys)4 protein
YP_002019475.1	TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: cch:Cag_0146 monofunctional biosynthetic peptidoglycan transglycosylase
YP_002019476.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: cch:Cag_0145 DNA mismatch repair protein
YP_002019477.1	TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: cph:Cpha266_2541 competence/damage-inducible protein CinA
YP_002019478.1	multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
YP_002019479.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit
YP_002019480.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_002019481.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate
YP_002019482.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_002019483.1	KEGG: cph:Cpha266_2547 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase
YP_002019484.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_002019485.1	TIGRFAM: phosphoheptose isomerase; KEGG: cph:Cpha266_2549 phosphoheptose isomerase
YP_002019486.1	KEGG: cch:Cag_1797 hypothetical protein
YP_002019487.1	PFAM: helix-turn-helix domain protein; KEGG: cch:Cag_1798 transcriptional regulator, XRE family
YP_002019488.1	KEGG: cch:Cag_1799 hypothetical protein
YP_002019489.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_002019490.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cch:Cag_0129 succinate/fumarate oxidoreductase
YP_002019491.1	KEGG: cch:Cag_0128 succinate dehydrogenase/fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin
YP_002019492.1	KEGG: cch:Cag_0127 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_002019493.1	PFAM: CBS domain containing protein; KEGG: cch:Cag_0126 CBS
YP_002019495.1	PFAM: beta-lactamase domain protein; KEGG: cph:Cpha266_0179 beta-lactamase domain protein
YP_002019496.1	KEGG: cph:Cpha266_0180 hypothetical protein
YP_002019497.1	PFAM: acriflavin resistance protein; KEGG: cph:Cpha266_0181 acriflavin resistance protein
YP_002019498.1	KEGG: plt:Plut_2000 hypothetical protein
YP_002019499.1	PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0183 outer membrane efflux protein
YP_002019500.1	PFAM: protein of unknown function DUF156; KEGG: pvi:Cvib_1645 hypothetical protein
YP_002019501.1	KEGG: cch:Cag_0120 hypothetical protein
YP_002019502.1	KEGG: cph:Cpha266_0190 hypothetical protein
YP_002019503.1	KEGG: cph:Cpha266_0191 hypothetical protein
YP_002019504.1	PFAM: transposase IS3/IS911 family protein; KEGG: net:Neut_1719 transposase IS3/IS911 family protein
YP_002019505.1	PFAM: Integrase catalytic region; KEGG: cph:Cpha266_1954 integrase, catalytic region
YP_002019506.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cph:Cpha266_0200 radical SAM protein
YP_002019507.1	KEGG: cph:Cpha266_0185 alpha/beta hydrolase fold
YP_002019508.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: cph:Cpha266_0186 isoprenylcysteine carboxyl methyltransferase
YP_002019509.1	KEGG: cph:Cpha266_0187 hypothetical protein
YP_002019510.1	PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: cph:Cpha266_0188 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
YP_002019511.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cph:Cpha266_0189 short-chain dehydrogenase/reductase SDR
YP_002019512.1	KEGG: cph:Cpha266_0190 hypothetical protein
YP_002019513.1	KEGG: cph:Cpha266_0191 hypothetical protein
YP_002019514.1	KEGG: cph:Cpha266_0192 hypothetical protein
YP_002019515.1	KEGG: cph:Cpha266_0193 hypothetical protein
YP_002019516.1	PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cph:Cpha266_0194 aldolase
YP_002019517.1	PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cph:Cpha266_0195 short chain dehydrogenase
YP_002019518.1	KEGG: cph:Cpha266_0196 hypothetical protein
YP_002019519.1	KEGG: pvi:Cvib_0371 hypothetical protein
YP_002019520.1	TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: cph:Cpha266_0198 2-vinyl bacteriochlorophyllide hydratase
YP_002019521.1	TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cch:Cag_0115 CrtF-related protein
YP_002019522.1	KEGG: cph:Cpha266_0202 chlorosome envelope protein B
YP_002019523.1	PFAM: Proto-chlorophyllide reductase 57 kD subunit; KEGG: cch:Cag_0119 hypothetical protein
YP_002019524.1	KEGG: plt:Plut_0810 hypothetical protein
YP_002019525.1	KEGG: cph:Cpha266_2301 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase
YP_002019526.1	PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cch:Cag_0116 elongator protein 3/MiaB/NifB
YP_002019527.1	TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cch:Cag_0115 CrtF-related protein
YP_002019528.1	KEGG: plt:Plut_2005 chlorosome envelope protein B
YP_002019529.1	PFAM: aminoglycoside phosphotransferase; KEGG: cph:Cpha266_0203 aminoglycoside phosphotransferase
YP_002019530.1	PFAM: Nucleotidyl transferase; KEGG: cch:Cag_0193 mannose-1-phosphate guanylyltransferase
YP_002019531.1	PFAM: conserved hypothetical protein; KEGG: cch:Cag_0194 hypothetical protein
YP_002019532.1	PFAM: Na+/solute symporter; KEGG: cph:Cpha266_0206 Na+/solute symporter
YP_002019533.1	KEGG: plt:Plut_2011 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002019534.1	PFAM: response regulator receiver; KEGG: cph:Cpha266_1786 response regulator receiver protein
YP_002019535.1	PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: cch:Cag_1729 hypothetical protein
YP_002019536.1	PFAM: pentapeptide repeat protein; KEGG: plt:Plut_2015 pentapeptide repeat family protein
YP_002019537.1	KEGG: cph:Cpha266_0211 hypothetical protein
YP_002019538.1	KEGG: plt:Plut_2017 hypothetical protein
YP_002019539.1	PFAM: Integral membrane protein TerC; KEGG: cph:Cpha266_1776 integral membrane protein TerC
YP_002019540.1	PFAM: K potassium transporter; KEGG: cph:Cpha266_1777 K+ potassium transporter
YP_002019541.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: cph:Cpha266_0215 rare lipoprotein A
YP_002019542.1	PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: cte:CT1075 thiol:disulfide interchange protein DsbD
YP_002019543.1	KEGG: cph:Cpha266_1807 hypothetical protein
YP_002019544.1	PFAM: cytochrome c assembly protein; KEGG: cch:Cag_1681 cytochrome c biogenesis protein
YP_002019545.1	PFAM: PilT protein domain protein; KEGG: cch:Cag_1325 nucleic acid-binding protein,contains PIN domain
YP_002019546.1	PFAM: SpoVT/AbrB domain protein; KEGG: cch:Cag_1324 hypothetical protein
YP_002019547.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_002019548.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era
YP_002019549.1	KEGG: cph:Cpha266_2535 phospholipase/carboxylesterase
YP_002019550.1	KEGG: pvi:Cvib_1672 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_002019551.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cch:Cag_1984 alpha amylase, catalytic subdomain
YP_002019552.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: plt:Plut_2031 peptide chain release factor 2
YP_002019553.1	PFAM: metallophosphoesterase; KEGG: cph:Cpha266_2539 hypothetical protein
YP_002019554.1	KEGG: ppd:Ppro_0176 hypothetical protein
YP_002019555.1	PFAM: DNA/RNA non-specific endonuclease; KEGG: bvi:Bcep1808_6848 DNA/RNA non-specific endonuclease
YP_002019556.1	forms homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_002019557.1	PFAM: Orn/Lys/Arg decarboxylase major region; aminotransferase class I and II; aminotransferase class-III; KEGG: csc:Csac_1225 glycine C-acetyltransferase
YP_002019558.1	KEGG: cch:Cag_0810 DEAD/DEAH box helicase-like
YP_002019559.1	KEGG: bpd:BURPS668_3905 hypothetical protein
YP_002019560.1	PFAM: protein of unknown function DUF955; SMART: helix-turn-helix domain protein; KEGG: bpd:BURPS668_3906 hypothetical protein
YP_002019561.1	KEGG: cph:Cpha266_1948 hypothetical protein
YP_002019562.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: cph:Cpha266_2553 UDP-N-acetylglucosamine 2-epimerase
YP_002019563.1	KEGG: cph:Cpha266_2554 hypothetical protein
YP_002019564.1	TIGRFAM: regulatory protein, FmdB family; PFAM:  regulatory protein FmdB; KEGG: cch:Cag_1970 hypothetical protein
YP_002019565.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: cch:Cag_1969 recombination protein O, RecO
YP_002019566.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_002019567.1	PFAM: protein of unknown function DUF190; KEGG: plt:Plut_2039 hypothetical protein
YP_002019568.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_002019569.1	KEGG: cch:Cag_0013 hypothetical protein
YP_002019570.1	PFAM: SOUL heme-binding protein; KEGG: cph:Cpha266_2566 SOUL heme-binding protein
YP_002019571.1	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: cch:Cag_0014 Holliday junction resolvase YqgF
YP_002019572.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_002019573.1	PFAM: Prephenate dehydrogenase; KEGG: cph:Cpha266_2572 prephenate dehydrogenase
YP_002019574.1	PFAM: ATP-NAD/AcoX kinase; KEGG: plt:Plut_2050 NAD(+) kinase
YP_002019575.1	KEGG: cph:Cpha266_2574 hypothetical protein
YP_002019576.1	TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: cch:Cag_1975  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
YP_002019577.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_002019578.1	PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cph:Cpha266_2577 ATPase AAA-2 domain protein
YP_002019579.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: cph:Cpha266_2578 glycoside hydrolase, family 3 domain protein
YP_002019580.1	PFAM: Phosphoglycerate mutase; KEGG: cph:Cpha266_2579  phosphohistidine phosphatase, SixA
YP_002019581.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_002019582.1	PFAM: protein of unknown function DUF205; KEGG: pvi:Cvib_1700 acyl-phosphate glycerol-3-phosphate acyltransferase
YP_002019583.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_002019584.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive
YP_002019585.1	PFAM: NLP/P60 protein; KEGG: cph:Cpha266_2584 NLP/P60 protein
YP_002019586.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_002019587.1	PFAM: Ppx/GppA phosphatase; KEGG: cch:Cag_2019 exopolyphosphatase
YP_002019588.1	KEGG: cph:Cpha266_2587 hypothetical protein
YP_002019589.1	KEGG: vha:VIBHAR_p08196 hypothetical protein
YP_002019590.1	KEGG: mar:MAE_61600 predicted nucleic acid-binding protein
YP_002019591.1	KEGG: mar:MAE_46960 hypothetical protein
YP_002019592.1	KEGG: cph:Cpha266_1379 transcriptional regulator, CopG family
YP_002019593.1	KEGG: tex:Teth514_0739 ATPase (AAA+ superfamily)-like protein
YP_002019594.1	KEGG: cph:Cpha266_0070 helix-turn-helix protein, CopG family
YP_002019595.1	PFAM: SMC domain protein; KEGG: vei:Veis_4173 SMC domain protein
YP_002019596.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cph:Cpha266_2588 AMP-dependent synthetase and ligase
YP_002019597.1	TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: cch:Cag_0083 adenosylmethionine--8-amino-7-oxononanoate aminotransferase
YP_002019598.1	TIGRFAM: dethiobiotin synthase; KEGG: cch:Cag_0082 dithiobiotin synthetase
YP_002019599.1	TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: plt:Plut_2067 biotin biosynthesis protein BioC
YP_002019600.1	PFAM: protein of unknown function DUF452; KEGG: plt:Plut_2068 hypothetical protein
YP_002019601.1	PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: plt:Plut_2069 8-amino-7-oxononanoate synthase
YP_002019602.1	KEGG: pvi:Cvib_1711 biotin synthase; PFAM: radical SAM protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_002019603.1	KEGG: cph:Cpha266_0111 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein
YP_002019604.1	PFAM: cell wall hydrolase/autolysin; KEGG: plt:Plut_2072 N-acetylmuramoyl-L-alanine amidase
YP_002019605.1	KEGG: cph:Cpha266_0109 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein
YP_002019606.1	TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: cph:Cpha266_0108 ferrous iron transport protein B
YP_002019607.1	PFAM: FeoA family protein; KEGG: plt:Plut_2075 ferrous iron transport protein A
YP_002019608.1	PFAM: histidine triad (HIT) protein; KEGG: pvi:Cvib_1717 histidine triad (HIT) protein
YP_002019609.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cph:Cpha266_0098 protein of unknown function DUF21
YP_002019610.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: pmt:PMT0296 hypothetical protein
YP_002019611.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mag:amb0540 outer membrane receptor protein
YP_002019613.1	KEGG: cch:Cag_1113 hypothetical protein
YP_002019614.1	PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: plt:Plut_2080 succinate dehydrogenase/fumarate reductase iron-sulfur subunit
YP_002019615.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_002019616.1	TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: cph:Cpha266_0102 succinate dehydrogenase subunit C
YP_002019617.1	PFAM: cyclase family protein; KEGG: cch:Cag_1936 hypothetical protein
YP_002019618.1	KEGG: plt:Plut_2086 lysophospholipase L2
YP_002019619.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pvi:Cvib_1727 rare lipoprotein A
YP_002019620.1	PFAM: protein of unknown function DUF89; KEGG: cph:Cpha266_1577 protein of unknown function DUF89
YP_002019621.1	PFAM: beta-lactamase domain protein; KEGG: pde:Pden_4160 SoxH protein-like
YP_002019622.1	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cph:Cpha266_0466 arsenical-resistance protein
YP_002019623.1	SMART: Rhodanese domain protein; KEGG: cph:Cpha266_0463 rhodanese domain protein
YP_002019626.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cph:Cpha266_0918 protein tyrosine phosphatase
YP_002019627.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: cte:CT0900 phosphate transport system regulatory protein
YP_002019628.1	KEGG: swo:Swol_2490 hypothetical protein
YP_002019629.1	KEGG: ajs:Ajs_3020 hypothetical protein
YP_002019631.1	PFAM: Abortive infection protein; KEGG: mth:MTH623 hypothetical protein
YP_002019632.1	KEGG: ngo:NGO1209 DNA cytosine methyltransferase M.NgoMIII; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase
YP_002019633.1	KEGG: ngo:NGO1208 NgoMIIIM
YP_002019634.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SEFIR domain protein; SMART: Tetratricopeptide domain protein; KEGG: rru:Rru_A1817 hypothetical protein
YP_002019635.1	similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity
YP_002019636.1	transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine
YP_002019637.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002019638.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cch:Cag_0071 beta-phosphoglucomutase hydrolase
YP_002019639.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_002019640.1	TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: pvi:Cvib_1733 nicotinate (nicotinamide) nucleotide adenylyltransferase
YP_002019641.1	KEGG: cph:Cpha266_2704  lipoprotein
YP_002019642.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_002019643.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_002019644.1	TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: cch:Cag_0065 ATP synthase F0, C subunit
YP_002019645.1	produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0
YP_002019646.1	KEGG: plt:Plut_2099 hypothetical protein
YP_002019647.1	KEGG: cph:Cpha266_2711 hypothetical protein
YP_002019648.1	PFAM: protein of unknown function DUF152; KEGG: cch:Cag_0061 protein of unknown function DUF152
YP_002019649.1	PFAM: acetyl-CoA hydrolase/transferase; KEGG: plt:Plut_2104 4-hydroxybutyrate coenzyme A transferase
YP_002019650.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_002019651.1	PFAM: cell division protein FtsA; KEGG: cch:Cag_0058 cell division protein FtsA
YP_002019652.1	PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: cph:Cpha266_2718 polypeptide-transport-associated domain protein, FtsQ-type
YP_002019653.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_002019654.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_002019655.1	PFAM: cell cycle protein; KEGG: cph:Cpha266_2722 cell cycle protein
YP_002019656.1	TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cch:Cag_0053 UDP-N-acetylmuramoylalanine-D-glutamate ligase
YP_002019657.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_002019658.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cph:Cpha266_2726 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
YP_002019659.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: cph:Cpha266_2727 peptidoglycan glycosyltransferase
YP_002019660.1	KEGG: cph:Cpha266_2728 hypothetical protein
YP_002019661.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: cph:Cpha266_2729 S-adenosyl-methyltransferase MraW
YP_002019662.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_002019663.1	KEGG: pvi:Cvib_1763 hypothetical protein
YP_002019664.1	PFAM: Chorismate mutase; KEGG: cch:Cag_0046 chorismate mutase
YP_002019665.1	PFAM: aminodeoxychorismate lyase; KEGG: cph:Cpha266_2733 aminodeoxychorismate lyase
YP_002019666.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_002019667.1	PFAM: Rhomboid family protein; KEGG: cph:Cpha266_2735 rhomboid family protein
YP_002019668.1	PFAM: protein of unknown function DUF1232; KEGG: plt:Plut_2125 hypothetical protein
YP_002019669.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: plt:Plut_2126 23S rRNA methyltransferase
YP_002019670.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: psa:PST_3195 ATP-dependent helicase HEPA
YP_002019671.1	KEGG: rrs:RoseRS_0299 hypothetical protein
YP_002019672.1	KEGG: cth:Cthe_1161 hypothetical protein
YP_002019673.1	KEGG: cph:Cpha266_1605 hypothetical protein
YP_002019674.1	KEGG: cph:Cpha266_1606 hypothetical protein
YP_002019676.1	PFAM: hypothetical protein-containing protein; hypothetical protein; SEFIR domain protein; SMART: Tetratricopeptide domain protein; KEGG: nwi:Nwi_3004 hypothetical protein protein
YP_002019677.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mag:amb2384 peptidyl-prolyl cis-trans isomerase
YP_002019678.1	PFAM: ROK family protein; KEGG: cph:Cpha266_2738 N-acetylglucosamine kinase
YP_002019679.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: pvi:Cvib_1770 phosphoesterase, PA-phosphatase related
YP_002019680.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: cch:Cag_2030 Oxa1/60 kDa IMP family protein
YP_002019681.1	PFAM: protein of unknown function DUF37; KEGG: cch:Cag_2031 protein of unknown function DUF37
YP_002019682.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_002019683.1	in Escherichia coli transcription of this gene is enhanced by polyamines