-- dump date 20240506_063600 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP024850.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP024850.1.REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63xREFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and NanoporeREFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42 Pseudo Genes (internal stop) :: 8 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42 Pseudo Genes (internal stop) :: 8 of 42 Pseudo Genes (multiple problems) :: 13 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42 Pseudo Genes (internal stop) :: 8 of 42 Pseudo Genes (multiple problems) :: 13 of 42 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024850.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42 Pseudo Genes (internal stop) :: 8 of 42 Pseudo Genes (multiple problems) :: 13 of 42 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_AP024851.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP024851.1.REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63xREFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and NanoporeREFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42 Pseudo Genes (internal stop) :: 8 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42 Pseudo Genes (internal stop) :: 8 of 42 Pseudo Genes (multiple problems) :: 13 of 42REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42 Pseudo Genes (internal stop) :: 8 of 42 Pseudo Genes (multiple problems) :: 13 of 42 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024851.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 63x Sequencing Technology :: Illumina MiSeq and Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 02:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,988 CDSs (total) :: 4,767 Genes (coding) :: 4,725 CDSs (with protein) :: 4,725 Genes (RNA) :: 221 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 171 ncRNAs :: 4 Pseudo Genes (total) :: 42 CDSs (without protein) :: 42 Pseudo Genes (ambiguous residues) :: 0 of 42 Pseudo Genes (frameshifted) :: 18 of 42 Pseudo Genes (incomplete) :: 31 of 42 Pseudo Genes (internal stop) :: 8 of 42 Pseudo Genes (multiple problems) :: 13 of 42 ##Genome-Annotation-Data-END## COMPLETENESS: full length.