-- dump date 20140619_234203 -- class Genbank::Contig -- table contig_comment -- id comment NC_013720.1 PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequencePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGAPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequencePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMPPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, MichiganPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USAPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: AerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: MotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: NonsporulatingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 20 - 25CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 20 - 25C pH :: 7PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 20 - 25C pH :: 7 Gram Staining :: gram-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 20 - 25C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 20 - 25C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: NonePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 20 - 25C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh waterPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 20 - 25C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water ##Metadata-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001848. URL -- http://www.jgi.doe.gov JGI Project ID: 4084270 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Pirellula staleyi DSM 6068 Culture Collection ID :: DSM 6068, ATCC 27377, ICPB 4128 GOLD Stamp ID :: Gi02538 Greengenes ID :: 203514 Funding Program :: DOE-GEBA 2007 Number of Reads :: 70045 Sanger, 450004 pyrosequence Assembly Method :: Newbler version 1.1.03.24, PGA Sequencing Depth :: 10.6x Sanger; 20.4x pyrosequence Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Freshwater Lake Lansing, Michigan Collection Date :: 1973 Isolation Country :: USA Latitude :: 42.759 Longitude :: -84.399 Oxygen Requirement :: Aerobe Cell Shape :: Sphere-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 20 - 25C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water ##Metadata-END## COMPLETENESS: full length.