-- dump date 20250217_002042 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP087711.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP087711.1.REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute.REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0xREFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32 Pseudo Genes (multiple problems) :: 3 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32 Pseudo Genes (multiple problems) :: 3 of 32 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP087711.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32 Pseudo Genes (multiple problems) :: 3 of 32 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP087712.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP087712.1.REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute.REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0xREFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32 Pseudo Genes (multiple problems) :: 3 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32 Pseudo Genes (multiple problems) :: 3 of 32 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP087712.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32 Pseudo Genes (multiple problems) :: 3 of 32 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP087713.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP087713.1.REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute.REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0xREFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32 Pseudo Genes (multiple problems) :: 3 of 32REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32 Pseudo Genes (multiple problems) :: 3 of 32 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP087713.1. Bacteria and source DNA available from pasteur institute. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2017 Assembly Method :: canu v. 2017 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 100.0x Sequencing Technology :: Illumina NextSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_020991025.1-RS_2024_12_11 Annotation Date :: 12/11/2024 17:18:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,481 CDSs (total) :: 3,318 Genes (coding) :: 3,286 CDSs (with protein) :: 3,286 Genes (RNA) :: 163 rRNAs :: 14, 13, 13 (5S, 16S, 23S) complete rRNAs :: 14, 13, 13 (5S, 16S, 23S) tRNAs :: 119 ncRNAs :: 4 Pseudo Genes (total) :: 32 CDSs (without protein) :: 32 Pseudo Genes (ambiguous residues) :: 0 of 32 Pseudo Genes (frameshifted) :: 7 of 32 Pseudo Genes (incomplete) :: 26 of 32 Pseudo Genes (internal stop) :: 2 of 32 Pseudo Genes (multiple problems) :: 3 of 32 ##Genome-Annotation-Data-END## COMPLETENESS: full length.