-- dump date   	20140619_235328
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
NP_904360.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
NP_904361.1	similar to GB:U03884, GB:U12541, GB:U12542, GB:U12544, GB:U12545, GB:S78737, GB:U12543, SP:P48048, PID:1698659, PID:1698660, PID:1698661, PID:1698662, PID:1698663, PID:1698664, PID:433143, PID:529313, PID:529315, PID:529317, PID:639911, and PID:639912; identified by sequence similarity; putative
NP_904362.1	similar to GB:L22208, GB:Z24754, PID:415596, and PID:415918; identified by sequence similarity; putative
NP_904363.1	Modulates the activities of several enzymes which are inactive in their acetylated form
NP_904365.1	identified by match to TIGR protein family HMM TIGR01695
NP_904367.1	identified by match to PFAM protein family HMM PF00665
NP_904369.1	similar to GB:J05272, SP:P20839, PID:307067, GB:J05272, SP:P20839, and PID:307067; identified by sequence similarity; putative
NP_904371.1	similar to GB:D26562, SP:P02351, GB:V00343, PID:42842, PID:473824, GB:U00096, PID:1552746, PID:1786365, GB:D26562, SP:P02351, GB:V00343, PID:42842, PID:473824, GB:U00096, PID:1552746, and PID:1786365; identified by sequence similarity; putative
NP_904372.1	similar to GB:Z33042, and GB:Z33042; identified by sequence similarity; putative
NP_904374.1	similar to GB:L29642, and PID:461402; identified by sequence similarity; putative
NP_904380.1	modulates transcription in response to the NADH/NAD(+) redox state
NP_904384.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
NP_904389.1	similar to SP:P22527, PID:1181554, and PID:43612; identified by sequence similarity; putative
NP_904390.1	similar to SP:P12743; identified by sequence similarity; putative
NP_904391.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NP_904395.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
NP_904396.1	similar to GB:D14662, SP:P30041, PID:285949, GB:D14662, SP:P30041, and PID:285949; identified by sequence similarity; putative
NP_904397.1	molecular chaperone
NP_904400.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
NP_904405.1	similar to GB:D00173, GB:S46963, SP:P11712, SP:P11713, SP:P33259, SP:P33261, PID:181362, PID:181364, PID:181366, and PID:219571; identified by sequence similarity; putative
NP_904406.1	similar to SP:Q05370, and PID:49224; identified by sequence similarity; putative
NP_904408.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
NP_904409.1	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria
NP_904419.1	similar to GB:X73124, SP:P39591, PID:413947, GB:AL009126, GB:X73124, SP:P39591, PID:413947, and GB:AL009126; identified by sequence similarity; putative
NP_904420.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
NP_904421.1	catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis
NP_904422.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
NP_904423.1	identified by match to TIGR protein family HMM TIGR01740
NP_904424.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
NP_904425.1	similar to GB:X80821, and PID:527580; identified by sequence similarity; putative
NP_904426.1	similar to GB:D26185, SP:P26497, GB:M59938, PID:143640, PID:40031, PID:467380, and GB:AL009126; identified by sequence similarity; putative
NP_904427.1	similar to GP:19714814; identified by sequence similarity; putative
NP_904428.1	similar to GB:Z36909, and PID:535280; identified by sequence similarity; putative
NP_904433.1	identified by match to TIGR protein family HMM TIGR01698
NP_904434.1	similar to GB:M98276, SP:Q04633, PID:151024, and PID:45364; identified by sequence similarity; putative
NP_904437.1	similar to GB:X03663, GB:X14720, GB:M14002, GB:M14193, SP:P07333, PID:1196434, PID:182522, PID:1915976, PID:1916754, PID:29900, and PID:442423; identified by sequence similarity; putative
NP_904442.1	similar to SP:P14114, GB:L19417, SP:P46444, and PID:304053; identified by sequence similarity; putative
NP_904443.1	This protein performs the mismatch recognition step during the DNA repair process
NP_904446.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
NP_904451.1	similar to SP:P33446, GB:X64876, and PID:313842; identified by sequence similarity; putative
NP_904452.1	similar to GB:Z21876, GB:Z31348, GB:Z31006, GB:Z31007, GB:Z31008, GB:Z31009, GB:Z31010, SP:P33897, PID:1302652, PID:1340149, PID:38591, GB:X01630, GB:L00077, GB:L00078, GB:L00079, GB:L00080, GB:L00081, GB:L00082, GB:L00084, GB:L00083, GB:Z36810, SP:P00966, PID:179047, PID:179057, and PID:28872; identified by sequence similarity; putative
NP_904455.1	similar to SP:P04170; identified by sequence similarity; putative
NP_904457.1	identified by match to PFAM protein family HMM PF02522
NP_904461.1	identified by match to TIGR protein family HMM TIGR01695
NP_904463.1	similar to GB:M26167, SP:P10720, and PID:292390; identified by sequence similarity; putative
NP_904465.1	similar to GB:L05425, PID:179285, GB:L05425, and PID:179285; identified by sequence similarity; putative
NP_904473.1	2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
NP_904475.1	identified by match to TIGR protein family HMM TIGR01695
NP_904477.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
NP_904479.1	similar to GB:L19444; identified by sequence similarity; putative
NP_904481.1	similar to GB:U00148, and PID:401712; identified by sequence similarity; putative
NP_904483.1	similar to GB:M14219, SP:P07585, PID:181170, and PID:609452; identified by sequence similarity; putative
NP_904484.1	similar to GB:M25108, SP:P05106, and PID:386833; identified by sequence similarity; putative
NP_904488.1	identified by match to PFAM protein family HMM PF00428
NP_904492.1	similar to GB:X56550, PID:530026, GB:X56550, and PID:530026; identified by sequence similarity; putative
NP_904495.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
NP_904498.1	identified by match to PFAM protein family HMM PF02631
NP_904501.1	similar to GB:D10483, SP:P11288, PID:216438, PID:537248, PID:1128976, GB:U00096, and PID:1786187; identified by sequence similarity; putative
NP_904504.1	catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate
NP_904505.1	similar to GP:11323229; identified by sequence similarity; putative
NP_904506.1	similar to GB:X75208, SP:P54753, and PID:406868; identified by sequence similarity; putative
NP_904507.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
NP_904508.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
NP_904509.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
NP_904512.1	similar to SP:P33159, GB:X68014, and PID:40807; identified by sequence similarity; putative
NP_904525.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
NP_904533.1	similar to GB:L05186, GB:L13616, SP:Q05397, and PID:439875; identified by sequence similarity; putative
NP_904535.1	identified by match to TIGR protein family HMM TIGR00278
NP_904536.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
NP_904543.1	similar to GB:Z27509, PID:185358, and PID:505446; identified by sequence similarity; putative
NP_904544.1	similar to GB:X13482, SP:P09661, and PID:37547; identified by sequence similarity; putative
NP_904545.1	similar to SP:P37011, GB:U00096, PID:1657597, PID:1773085, and PID:1786601; identified by sequence similarity; putative
NP_904546.1	similar to GB:L14266, and PID:293079; identified by sequence similarity; putative
NP_904551.1	similar to GB:U09868, PID:498877, GB:U09868, and PID:498877; identified by sequence similarity; putative
NP_904554.1	similar to GB:M24777, SP:P06994, GB:M10417, GB:U04742, GB:U04743, GB:U04744, GB:U04745, GB:U04746, GB:U04747, GB:U04748, GB:U04749, GB:U04750, GB:U04751, GB:U04752, GB:U04753, GB:U04754, GB:U04755, GB:U04756, GB:U04757, GB:U04758, GB:U04759, GB:U04760, GB:U04770, GB:Y00129, PID:440001, PID:440003, PID:440005, PID:440009, PID:440011, PID:440013, PID:440017, PID:440019, PID:440021, PID:440023, PID:440025, PID:440027, PID:440029, PID:440031, PID:440033, PID:440035, PID:440037, PID:440057, PID:450385, PID:146799, PID:41989, PID:606175, GB:U00096, PID:1789632, PID:2289251, PID:2289253, PID:2289255, PID:2289257, PID:2289259, PID:2289261, PID:2289263, PID:2289265, PID:2289267, PID:2289269, PID:2289271, PID:2289273, PID:2289275, PID:2289277, PID:2289279, PID:2289281, PID:2289283, PID:2289285, PID:2289287, PID:2289289, PID:2289291, PID:2289293, PID:2289295, PID:2289297, PID:2289299, PID:2289301, PID:2289303, PID:2289305, PID:2289307, PID:2289309, PID:2289311, PID:2289313, PID:2289315, PID:2289317, PID:2289319, PID:22
NP_904555.1	similar to GB:Z31385, PID:619427, PID:619615, PID:619616, PID:861002, PID:940532, GB:Z31385, PID:619427, PID:619615, PID:619616, PID:861002, and PID:940532; identified by sequence similarity; putative
NP_904558.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
NP_904561.1	similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity
NP_904567.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NP_904568.1	identified by match to TIGR protein family HMM TIGR01656
NP_904570.1	similar to GB:D38553, PID:559715, GB:D38553, and PID:559715; identified by sequence similarity; putative
NP_904573.1	similar to GB:D26185, SP:P37573, PID:467476, and GB:AL009126; identified by sequence similarity; putative
NP_904575.1	similar to SP:P35887, GB:U01667, and PID:403535; identified by sequence similarity; putative
NP_904577.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
NP_904578.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
NP_904579.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NP_904581.1	with SufCD activates cysteine desulfurase SufS
NP_904583.1	similar to GB:L36531, SP:P53708, PID:559056, GB:L36531, SP:P53708, and PID:559056; identified by sequence similarity; putative
NP_904588.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
NP_904589.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
NP_904591.1	similar to GB:L04510, SP:P36406, and PID:292070; identified by sequence similarity; putative
NP_904592.1	similar to GB:L04572, SP:P28689, GB:L05381, PID:145787, PID:146393, GB:U00096, PID:1736484, and PID:1788147; identified by sequence similarity; putative
NP_904593.1	similar to GP:9837392, and GP:12024595; identified by sequence similarity; putative
NP_904594.1	identified by match to TIGR protein family HMM TIGR00556
NP_904596.1	similar to SP:P31092, GB:M34046, GB:M61886, GB:J04129, and SP:P09466; identified by sequence similarity; putative
NP_904597.1	similar to GB:X53463, SP:P18283, and PID:579930; identified by sequence similarity; putative
NP_904598.1	similar to GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, PID:1789653, GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, and PID:1789653; identified by sequence similarity; putative
NP_904600.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
NP_904603.1	similar to GB:Z27456, GB:Z29610, GB:Z29611, GB:Z30082, GB:Z18918, PID:1335183, PID:505397, PID:553415, PID:553456, PID:598160, PID:780285, and PID:860980; identified by sequence similarity; putative
NP_904604.1	similar to GB:D28503, PID:556484, and SP:Q59295; identified by sequence similarity; putative
NP_904605.1	identified by match to TIGR protein family HMM TIGR01692
NP_904612.1	similar to GB:M76558, PID:179752, and PID:179764; identified by sequence similarity; putative
NP_904614.1	similar to GB:M33916, GB:M37840, PID:1008917, PID:1008919, PID:149926, and PID:149976; identified by sequence similarity; putative
NP_904615.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
NP_904619.1	involved in the electron transport chain; in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate
NP_904620.1	similar to GB:X69604, PID:436326, and PID:928987; identified by sequence similarity; putative
NP_904621.1	similar to GB:X71398, GB:X69601, GB:X69603, PID:436320, PID:436324, and PID:436406; identified by sequence similarity; putative
NP_904622.1	similar to GB:S66431, SP:P29375, GB:M85252, and PID:155352; identified by sequence similarity; putative
NP_904623.1	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase
NP_904624.1	similar to GB:M22902, SP:P40768, PID:143674, GB:X58072, GB:M69106, GB:X55037, SP:P23771, PID:31662, PID:31664, and PID:31666; identified by sequence similarity; putative
NP_904626.1	similar to SP:P37718, GB:X54676, and PID:580743; identified by sequence similarity; putative
NP_904627.1	similar to GB:L25659, SP:P29486, GB:X64098, PID:398397, PID:409772, PID:48405, SP:P37828, and PID:901847; identified by sequence similarity; putative
NP_904630.2	similar to GB:X03072, SP:P04628, and PID:33936; identified by sequence similarity; putative
NP_904631.1	involved in the peptidyltransferase reaction during translation
NP_904632.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_904634.1	identified by match to PFAM protein family HMM PF04975
NP_904636.1	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins
NP_904637.1	similar to GB:U01100, and PID:434022; identified by sequence similarity; putative
NP_904639.1	similar to GB:D13563, and PID:216220; identified by sequence similarity; putative
NP_904640.1	similar to GB:X76383, PID:434360, GB:X76383, and PID:434360; identified by sequence similarity; putative
NP_904643.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
NP_904644.1	similar to GB:M22589, SP:P13423, and PID:143282; identified by sequence similarity; putative
NP_904645.1	similar to GB:L05147, SP:P51452, and PID:181840; identified by sequence similarity; putative
NP_904646.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
NP_904648.1	similar to SP:P10245; identified by sequence similarity; putative
NP_904649.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
NP_904655.1	catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine
NP_904658.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
NP_904659.1	similar to GB:M31516, GB:M30142, SP:P08174, and PID:181476; identified by sequence similarity; putative
NP_904660.1	catalyzes branch migration in Holliday junction intermediates
NP_904661.1	similar to SP:Q05426, and PID:150149; identified by sequence similarity; putative
NP_904664.1	similar to GB:L04751, SP:Q02928, PID:181397, PID:535787, PID:994758, GB:L04751, SP:Q02928, PID:181397, PID:535787, and PID:994758; identified by sequence similarity; putative
NP_904668.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
NP_904669.1	involved in the allosteric regulation of aspartate carbamoyltransferase
NP_904670.1	identified by match to PFAM protein family HMM PF01613
NP_904671.1	similar to GB:S46950, SP:P29274, GB:U20231, PID:1117998, PID:177892, and PID:400452; identified by sequence similarity; putative
NP_904672.1	similar to SP:P37742, GB:L11721, SP:P24175, GB:M77127, PID:147165, PID:304879, PID:415624, GB:U00096, PID:1407617, PID:1736750, PID:1736754, and PID:1788361; identified by sequence similarity; putative
NP_904676.1	identified by match to PFAM protein family HMM PF01612
NP_904678.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_904679.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
NP_904683.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
NP_904684.1	forms a direct contact with the tRNA during translation
NP_904685.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
NP_904686.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
NP_904687.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
NP_904688.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
NP_904689.1	similar to GP:17430597; identified by sequence similarity; putative
NP_904691.1	Function of MutS2 is unknown. It should not be considered a DNA mismatch repair protein. It is likely a DNA mismatch binding protein of unknown cellular function.; similar to SP:P07324, and PID:40563; identified by sequence similarity; putative
NP_904692.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
NP_904694.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
NP_904695.1	similar to GB:L13858, PID:1220368, and PID:306780; identified by sequence similarity; putative
NP_904696.1	binds directly to 23S ribosomal RNA
NP_904697.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
NP_904698.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
NP_904699.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
NP_904700.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
NP_904701.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
NP_904702.1	similar to GB:L07499, SP:P34918, and PID:410113; identified by sequence similarity; putative
NP_904704.1	similar to GB:S45332, GB:M34986, SP:P19235, PID:182134, PID:182201, PID:182245, PID:553281, GB:S45332, GB:M34986, SP:P19235, PID:182134, PID:182201, PID:182245, and PID:553281; identified by sequence similarity; putative
NP_904707.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
NP_904708.1	identified by match to PFAM protein family HMM PF05164
NP_904709.1	identified by match to TIGR protein family HMM TIGR01682
NP_904713.1	similar to GP:10954334, and GP:2182812; identified by sequence similarity; putative
NP_904714.1	similar to SP:P14160, GB:M33208, GB:M33209, GB:M33210, SP:P09619, and PID:532593; identified by sequence similarity; putative
NP_904719.1	binds and unfolds substrates as part of the ClpXP protease
NP_904720.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
NP_904726.1	similar to GB:M13994, GB:M13995, GB:M14745, GB:L21669, GB:L21667, GB:L21668, GB:S72602, GB:M13415, GB:M15878, SP:P10415, SP:P10416, and PID:179369; identified by sequence similarity; putative
NP_904727.1	identified by match to PFAM protein family HMM PF00665
NP_904731.1	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin
NP_904733.1	similar to SP:P08486, and PID:153155; identified by sequence similarity; putative
NP_904734.1	similar to GB:L11577; identified by sequence similarity; putative
NP_904738.1	similar to SP:P17161, GB:X03147, PID:43926, SP:P17161, GB:X03147, and PID:43926; identified by sequence similarity; putative
NP_904739.1	identified by match to TIGR protein family HMM TIGR01200
NP_904745.1	catalyzes the release of the N-terminal amino acid from a tripeptide
NP_904747.2	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
NP_904762.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
NP_904765.1	identified by match to PFAM protein family HMM PF01238
NP_904770.1	similar to GB:L29636, SP:P38133, and PID:532251; identified by sequence similarity; putative
NP_904772.1	similar to SP:P34024, GB:X54618, GB:X60035, and PID:581304; identified by sequence similarity; putative
NP_904773.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
NP_904775.1	identified by match to TIGR protein family HMM TIGR01466
NP_904776.1	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine
NP_904781.1	identified by match to PFAM protein family HMM PF02870
NP_904783.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
NP_904784.1	identified by match to TIGR protein family HMM TIGR01695
NP_904785.1	similar to GB:X78678, SP:P50053, PID:1743262, PID:1743264, PID:1845162, and PID:558351; identified by sequence similarity; putative
NP_904792.1	similar to GB:X70848, GB:J04759, GB:M63960, SP:P08129, SP:P36873, SP:P37140, PID:190281, PID:190516, PID:35451, PID:484316, PID:506772, and PID:531476; identified by sequence similarity; putative
NP_904793.1	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2
NP_904795.1	similar to GB:X68203, SP:P16057, SP:P35916, PID:1150991, PID:297050, and PID:388522; identified by sequence similarity; putative
NP_904796.1	similar to GB:L23320, SP:P35251, PID:296908, PID:307338, and PID:410218; identified by sequence similarity; putative
NP_904797.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
NP_904799.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
NP_904801.1	similar to GB:M28829, and PID:551976; identified by sequence similarity; putative
NP_904804.1	catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate
NP_904805.1	identified by match to PFAM protein family HMM PF02130
NP_904806.1	similar to SP:P35157, and SP:P35158; identified by sequence similarity; putative
NP_904807.1	Essential for recycling GMP and indirectly, cGMP
NP_904809.2	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins
NP_904815.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
NP_904816.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
NP_904817.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
NP_904818.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
NP_904820.1	CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
NP_904821.1	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria
NP_904822.1	similar to GB:J05068, SP:P20061, and PID:307479; identified by sequence similarity; putative
NP_904823.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
NP_904824.1	similar to GB:M34462, GB:M35670, GB:M36805, GB:X65787, GB:Y00809, GB:Z26248, SP:P13727, PID:182080, PID:187415, PID:306839, PID:31137, PID:312045, PID:34476, and PID:400414; identified by sequence similarity; putative
NP_904825.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
NP_904828.1	similar to GB:M24141, SP:P14924, and PID:155614; identified by sequence similarity; putative
NP_904831.1	previously submitted to Genbank by Ross, et al as immunoreactive 52 kDa antigen PG41
NP_904836.1	identified by match to PFAM protein family HMM PF01381
NP_904843.1	similar to GB:M63420, GB:J03261, SP:P15018, PID:178415, PID:187141, PID:34362, and PID:575489; identified by sequence similarity; putative
NP_904848.1	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation
NP_904851.1	similar to GB:M96364, PID:1033197, PID:144480, and SP:Q59335; identified by sequence similarity; putative
NP_904852.1	similar to GB:J04046, GB:X52606, GB:X52607, GB:X52608, SP:P02593, SP:P27482, PID:179810, PID:179884, PID:179888, PID:2055425, PID:531827, PID:665588, PID:825635, GB:M19311, SP:P02593, SP:P27482, PID:179810, PID:179884, PID:179888, PID:2055425, PID:531827, PID:665588, PID:825635, GB:M27319, GB:U11886, GB:U12022, GB:U16851, SP:P02593, SP:P27482, PID:179810, PID:179884, PID:179888, PID:2055425, PID:531827, PID:665588, and PID:825635; identified by sequence similarity; putative
NP_904856.1	identified by match to PFAM protein family HMM PF00216
NP_904857.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
NP_904859.1	similar to GB:M87049, SP:P06983, GB:X04242, GB:X12614, PID:148204, PID:41186, PID:41664, PID:41666, GB:U00096, PID:2367293, GB:X53331, GB:X07362, GB:M55270, GB:M58549, SP:P08493, PID:187591, PID:187593, PID:34614, and PID:34618; identified by sequence similarity; putative
NP_904864.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
NP_904865.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NP_904867.1	similar to GB:M27504, GB:Z15111, GB:S56813, GB:X68060, GB:Z15115, GB:D17023, SP:Q02880, PID:1354507, PID:2088635, PID:288565, PID:288567, PID:339810, PID:37231, and PID:38325; identified by sequence similarity; putative
NP_904868.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
NP_904869.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
NP_904870.1	similar to GB:M60722, SP:P23256, PID:146693, GB:U00096, PID:1742676, PID:1742684, PID:1742716, and PID:1787909; identified by sequence similarity; putative
NP_904871.1	similar to GB:M60722, SP:P23256, PID:146693, GB:U00096, PID:1742676, PID:1742684, PID:1742716, and PID:1787909; identified by sequence similarity; putative
NP_904872.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
NP_904873.1	similar to GB:M31903, SP:P16218, and PID:144774; identified by sequence similarity; putative
NP_904874.1	similar to GB:J04974, GB:U32169, GB:L18987, SP:P13942, PID:1000745, PID:1000747, PID:1724042, and PID:180715; identified by sequence similarity; putative
NP_904875.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
NP_904876.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
NP_904879.1	RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
NP_904880.1	similar to GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, and PID:180195; identified by sequence similarity; putative
NP_904881.1	similar to GB:Z19055, SP:P42394, PID:396660, GB:Z19055, SP:P42394, and PID:396660; identified by sequence similarity; putative
NP_904882.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
NP_904883.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
NP_904884.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
NP_904886.1	similar to GB:M89481, SP:P37409, and PID:153891; identified by sequence similarity; putative
NP_904888.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
NP_904889.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
NP_904900.1	similar to SP:Q05489, PID:49206, PID:640960, and PID:1247764; identified by sequence similarity; putative
NP_904903.1	identified by match to PFAM protein family HMM PF00578
NP_904904.1	identified by match to TIGR protein family HMM TIGR01698
NP_904908.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
NP_904909.1	identified by match to PFAM protein family HMM PF05036
NP_904910.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
NP_904912.1	similar to GB:D10483, SP:P05636, GB:X04711, PID:216475, PID:40918, GB:U00096, and PID:1786235; identified by sequence similarity; putative
NP_904913.1	similar to GB:M63007, SP:P27345, and PID:142306; identified by sequence similarity; putative
NP_904914.1	catalyzes the phosphorylation of NAD to NADP
NP_904915.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
NP_904917.1	identified by match to PFAM protein family HMM PF02472
NP_904920.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
NP_904921.1	identified by match to TIGR protein family HMM TIGR01695
NP_904922.1	similar to SP:P14071; identified by sequence similarity; putative
NP_904923.1	similar to GB:X68277, SP:P28562, and PID:29981; identified by sequence similarity; putative
NP_904924.1	similar to GB:X07743, SP:P08567, and PID:35518; identified by sequence similarity; putative
NP_904925.1	similar to GB:M23245, SP:P07773, and PID:141753; identified by sequence similarity; putative
NP_904926.1	similar to GB:L23560, SP:P01743, SP:P23083, PID:499592, PID:509804, PID:553397, PID:553411, PID:553471, PID:560840, PID:567116, PID:619770, PID:619775, and PID:860978; identified by sequence similarity; putative
NP_904927.1	similar to SP:P06975, GB:X02589, PID:41515, GB:U00096, PID:1651290, PID:1651295, and PID:1786899; identified by sequence similarity; putative
NP_904929.1	identified by match to PFAM protein family HMM PF03692
NP_904931.1	similar to SP:P21862, GB:X54049, PID:43108, PID:882566, GB:U00096, and PID:1789414; identified by sequence similarity; putative
NP_904932.1	similar to GP:4582460, and GP:19714389; identified by sequence similarity; putative
NP_904936.1	in Escherichia coli transcription of this gene is enhanced by polyamines
NP_904937.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
NP_904938.1	identified by match to TIGR protein family HMM TIGR01681
NP_904939.1	similar to GB:L29436, and PID:459904; identified by sequence similarity; putative
NP_904947.1	similar to GB:Z14955, GB:Z14954, GB:Z29574, GB:Z29575, SP:Q02223, PID:1930146, PID:29408, PID:33807, PID:471245, and PID:499189; identified by sequence similarity; putative
NP_904949.1	similar to GB:L23560, SP:P01743, SP:P23083, PID:499592, PID:509804, PID:553397, PID:553411, PID:553471, PID:560840, PID:567116, PID:619770, PID:619775, and PID:860978; identified by sequence similarity; putative
NP_904950.1	Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
NP_904951.1	similar to SP:P09192, GB:L36958, PID:1161271, PID:558141, PID:1001364, SP:P09192, GB:L36958, PID:1161271, PID:558141, and PID:1001364; identified by sequence similarity; putative
NP_904953.1	similar to GB:M22488, GB:L35279, GB:L35278, SP:P13497, and PID:619424; identified by sequence similarity; putative
NP_904954.1	similar to GB:X67514, and PID:433461; identified by sequence similarity; putative
NP_904955.1	previously submitted to Genbank by Ross, et al as immunoreactive 50kD antigen PG53
NP_904963.1	similar to GB:Z18284, GB:L26494, SP:P20264, SP:Q03052, PID:35134, PID:508990, GB:Z18284, GB:L26494, SP:P20264, SP:Q03052, PID:35134, and PID:508990; identified by sequence similarity; putative
NP_904964.1	similar to GB:D11144, GB:D11145, GB:D11146, GB:D11147, GB:D11148, GB:D11149, GB:D11150, GB:D11151, GB:L06622, GB:S45956, GB:S81539, SP:P25101, PID:181957, PID:219630, PID:219650, and PID:288313; identified by sequence similarity; putative
NP_904966.1	identified by match to PFAM protein family HMM PF01106
NP_904973.1	similar to GB:U05040, and PID:460152; identified by sequence similarity; putative
NP_904976.1	similar to GB:M64120, SP:P28030, and PID:155295; identified by sequence similarity; putative
NP_904977.1	identified by match to TIGR protein family HMM TIGR00035
NP_904978.1	identified by match to PFAM protein family HMM PF03724
NP_904981.1	similar to GB:Y00281, SP:P04843, and PID:36053; identified by sequence similarity; putative
NP_904982.1	identified by match to PFAM protein family HMM PF01346
NP_904985.1	similar to GB:N00031, GB:L00354, GB:N00050, SP:P06307, and PID:179996; identified by sequence similarity; putative
NP_904986.1	identified by match to PFAM protein family HMM PF03932
NP_904987.1	similar to GB:L19084, SP:P33668, PID:304942, GB:U00096, PID:1773180, and PID:1786707; identified by sequence similarity; putative
NP_904992.1	similar to GB:D26166, and PID:442483; identified by sequence similarity; putative
NP_904996.1	similar to GB:X54057, and PID:48509; identified by sequence similarity; putative
NP_905000.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
NP_905003.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
NP_905004.1	similar to SP:P37718, GB:X54676, and PID:580743; identified by sequence similarity; putative
NP_905006.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
NP_905007.1	identified by match to PFAM protein family HMM PF01402
NP_905008.1	similar to GB:X63768, and PID:47572; identified by sequence similarity; putative
NP_905009.1	member of metallo-beta-lactamase; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions
NP_905010.1	similar to GB:D26166, and PID:442483; identified by sequence similarity; putative
NP_905011.1	identified by match to PFAM protein family HMM PF01844
NP_905012.1	similar to GB:L20916, SP:Q08360, PID:443723, and GB:AL009126; identified by sequence similarity; putative
NP_905014.1	identified by match to TIGR protein family HMM TIGR00068
NP_905016.1	similar to GB:X06182, GB:S68472, GB:X65959, GB:X69301, GB:X69302, GB:X69303, GB:X69304, GB:X69305, GB:X69306, GB:X69307, GB:X69308, GB:X69309, GB:X69310, GB:X69311, GB:X69312, GB:X69313, GB:X69314, GB:X69315, GB:X69316, GB:X72595, GB:X72599, SP:P10721, PID:34087, PID:825686, GB:X06182, GB:S68472, GB:X65959, GB:X69301, GB:X69302, GB:X69303, GB:X69304, GB:X69305, GB:X69306, GB:X69307, GB:X69308, GB:X69309, GB:X69310, GB:X69311, GB:X69312, GB:X69313, GB:X69314, GB:X69315, GB:X69316, GB:X72595, GB:X72599, SP:P10721, PID:34087, and PID:825686; identified by sequence similarity; putative
NP_905018.1	identified by match to PFAM protein family HMM PF00535
NP_905020.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
NP_905027.1	similar to GB:M86737, SP:Q08945, and PID:184242; identified by sequence similarity; putative
NP_905028.1	similar to SP:P08367, GB:M97495, GB:M13608, PID:147249, PID:147691, PID:537237, and PID:1790859; identified by sequence similarity; putative
NP_905038.1	similar to GB:M13144, GB:M13981, GB:X04446, GB:X04445, SP:P05111, PID:1204105, PID:186413, PID:307068, and PID:490130; identified by sequence similarity; putative
NP_905040.1	similar to SP:P05974; identified by sequence similarity; putative
NP_905046.1	similar to GB:L34060, SP:P55286, and PID:506412; identified by sequence similarity; putative
NP_905052.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
NP_905053.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
NP_905054.1	similar to GB:Z11584, GB:Z11583, GB:Z14227, GB:Z14229, and GB:Z14228; identified by sequence similarity; putative
NP_905055.1	similar to GB:U07794, GB:U07793, GB:L27071, GB:U07791, GB:U07792, SP:P42681, PID:1161364, PID:508223, PID:508224, and PID:684986; identified by sequence similarity; putative
NP_905057.1	similar to SP:P15318, GB:Y00545, PID:396666, PID:39732, PID:412231, and PID:580668; identified by sequence similarity; putative
NP_905058.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
NP_905063.1	similar to GB:M14584, GB:Y00081, GB:M18403, GB:S56892, GB:X04403, GB:A09367, GB:M54894, GB:X04602, GB:M29150, SP:P05231, PID:186352, PID:23833, PID:23835, PID:29495, PID:306910, PID:306911, PID:307063, PID:32674, PID:33850, PID:490070, GB:Z22970, and PID:312146; identified by sequence similarity; putative
NP_905064.1	catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate
NP_905066.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
NP_905068.1	similar to GB:X59960, GB:X52679, GB:M59916, GB:M59917, GB:X52678, GB:M81780, GB:X63600, SP:P17405, PID:179095, PID:28880, PID:402621, PID:553192, PID:556809, PID:825629, PID:972769, and PID:972770; identified by sequence similarity; putative
NP_905071.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
NP_905079.1	similar to GB:L25896, PID:451865, GB:L25896, and PID:451865; identified by sequence similarity; putative
NP_905083.1	identified by match to TIGR protein family HMM TIGR01695
NP_905084.1	identified by match to PFAM protein family HMM PF02178
NP_905100.1	identified by match to TIGR protein family HMM TIGR01764
NP_905106.1	identified by match to PFAM protein family HMM PF01381
NP_905107.1	similar to GB:D90318, GB:D90319, GB:D90320, GB:D90321, GB:D90322, GB:D90323, GB:D90324, GB:D90325, GB:D90326, GB:D90327, GB:D90328, GB:D90329, GB:D90330, GB:D90331, GB:D90332, GB:D90333, GB:D90334, GB:X16323, GB:M29145, GB:M60718, GB:M73239, SP:P14210, PID:1378042, PID:184032, PID:184034, PID:219700, PID:306846, PID:32082, PID:32084, and PID:337936; identified by sequence similarity; putative
NP_905108.1	similar to GB:D90318, GB:D90319, GB:D90320, GB:D90321, GB:D90322, GB:D90323, GB:D90324, GB:D90325, GB:D90326, GB:D90327, GB:D90328, GB:D90329, GB:D90330, GB:D90331, GB:D90332, GB:D90333, GB:D90334, GB:X16323, GB:M29145, GB:M60718, GB:M73239, SP:P14210, PID:1378042, PID:184032, PID:184034, PID:219700, PID:306846, PID:32082, PID:32084, and PID:337936; identified by sequence similarity; putative
NP_905110.1	similar to GB:M36711, GB:M61156, GB:X77343, and SP:P05549; identified by sequence similarity; putative
NP_905111.1	Possibly an isoschizomer of Eco57IR.
NP_905112.1	in Bacteroides fragilis this site-specific serine recombinase globally regulates a number of loci involved in capsular polysaccharide production
NP_905113.1	similar to GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, PID:1789653, GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, and PID:1789653; identified by sequence similarity; putative
NP_905116.1	similar to GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:
NP_905123.1	similar to GB:L32019, and PID:474892; identified by sequence similarity; putative
NP_905124.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
NP_905127.1	similar to GB:L19338, SP:P37926, PID:349136, GB:M26665, GB:M18372, GB:L05514, SP:P15515, SP:P15516, PID:179466, PID:184058, and PID:292146; identified by sequence similarity; putative
NP_905128.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
NP_905132.1	similar to GB:Z21507, SP:P29692, and PID:38522; identified by sequence similarity; putative
NP_905137.2	catalyzes the reduction of hydroxylamine to ammonia and water
NP_905138.1	similar to GB:U05670; identified by sequence similarity; putative
NP_905141.1	similar to GB:D10483, SP:P06137, GB:K02668, GB:M36531, GB:X02821, PID:146025, PID:146032, PID:216508, PID:40862, PID:41494, GB:U00096, PID:1786282, GB:D10483, SP:P06137, GB:K02668, GB:M36531, GB:X02821, PID:146025, PID:146032, PID:216508, PID:40862, PID:41494, GB:U00096, and PID:1786282; identified by sequence similarity; putative
NP_905142.1	similar to GB:X59066, GB:X65460, GB:D28126, GB:D14710, SP:P25705, PID:28938, PID:34468, PID:559317, and PID:559325; identified by sequence similarity; putative
NP_905143.1	similar to SP:P11697; identified by sequence similarity; putative
NP_905146.1	identified by match to TIGR protein family HMM TIGR00286
NP_905148.1	identified by match to PFAM protein family HMM PF03167
NP_905151.1	identified by match to TIGR protein family HMM TIGR01695
NP_905154.1	similar to SP:P03064, PID:1045524, PID:151680, PID:501832, PID:1053000, SP:P26295, and GB:X17241; identified by sequence similarity; putative
NP_905156.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
NP_905159.1	identified by match to TIGR protein family HMM TIGR00082
NP_905160.1	identified by match to TIGR protein family HMM TIGR01680
NP_905161.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
NP_905168.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
NP_905170.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
NP_905173.1	identified by match to TIGR protein family HMM TIGR01652
NP_905175.1	identified by match to PFAM protein family HMM PF00665
NP_905178.1	identified by match to PFAM protein family HMM PF04313
NP_905179.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
NP_905180.1	similar to GB:X59739, GB:X59738, GB:X59740, SP:P08048, SP:P17010, PID:340434, PID:38020, PID:38022, and PID:38024; identified by sequence similarity; putative
NP_905181.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
NP_905182.1	similar to GB:M77836, SP:P32322, and PID:189498; identified by sequence similarity; putative
NP_905184.1	catalyzes the formation of dUMP from dUTP
NP_905185.1	similar to GB:L12710, and PID:414576; identified by sequence similarity; putative
NP_905187.1	similar to GB:L10678, SP:P35080, and PID:190388; identified by sequence similarity; putative
NP_905190.1	similar to GB:M22488, GB:L35279, GB:L35278, SP:P13497, and PID:619424; identified by sequence similarity; putative
NP_905191.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
NP_905193.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
NP_905195.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
NP_905196.1	similar to GB:M55249, SP:P21319, PID:145154, GB:M22404, and PID:188866; identified by sequence similarity; putative
NP_905197.1	similar to GB:X12534, SP:P10114, PID:35861, and PID:412184; identified by sequence similarity; putative
NP_905202.1	similar to GB:J02906, SP:P24903, and PID:181358; identified by sequence similarity; putative
NP_905203.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
NP_905204.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
NP_905205.1	similar to GB:X57766, SP:P24347, PID:456257, and PID:987949; identified by sequence similarity; putative
NP_905210.1	similar to GB:L10064, SP:Q05071, and PID:153365; identified by sequence similarity; putative
NP_905213.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
NP_905214.1	similar to GB:X59964, SP:P28325, PID:30264, and PID:398711; identified by sequence similarity; putative
NP_905215.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
NP_905216.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
NP_905220.1	identified by match to PFAM protein family HMM PF01381
NP_905224.1	similar to GP:19714875, and SP:P38059; identified by sequence similarity; putative
NP_905227.1	similar to SP:P38372, PID:484252, and PID:2160219; identified by sequence similarity; putative
NP_905230.1	identified by match to PFAM protein family HMM PF01726
NP_905233.1	similar to SP:P00632; identified by sequence similarity; putative
NP_905234.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
NP_905235.1	similar to GB:Z14982, GB:X62598, GB:X66401, GB:U17496, GB:U17497, GB:U32863, SP:P28062, PID:1045469, PID:1045471, PID:1054747, PID:38482, PID:596140, and PID:596142; identified by sequence similarity; putative
NP_905238.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
NP_905253.1	similar to GB:L11998, PID:310609, PID:405561, GB:L11998, PID:310609, and PID:405561; identified by sequence similarity; putative
NP_905254.1	similar to GB:D14694, SP:P48651, and PID:603802; identified by sequence similarity; putative
NP_905256.1	similar to GB:X52520, GB:X52509, SP:P17735, PID:1217965, PID:36713, and PID:37502; identified by sequence similarity; putative
NP_905263.1	identified by match to TIGR protein family HMM TIGR01695
NP_905264.1	similar to GB:D16629, PID:416248, and PID:2189974; identified by sequence similarity; putative
NP_905270.1	similar to GB:J01600, SP:P00475, GB:V00272, GB:Z19601, PID:145706, PID:41227, PID:41230, PID:606321, GB:U00096, and PID:1789789; identified by sequence similarity; putative
NP_905271.1	similar to GB:X56351, SP:P13196, PID:28583, GB:X56351, SP:P13196, and PID:28583; identified by sequence similarity; putative
NP_905272.1	similar to GB:Z12296, PID:43338, GB:Z12296, and PID:43338; identified by sequence similarity; putative
NP_905273.1	identified by match to PFAM protein family HMM PF04055
NP_905276.1	similar to GB:M60874, SP:P30959, and PID:152077; identified by sequence similarity; putative
NP_905277.1	similar to GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, and PID:1789653; identified by sequence similarity; putative
NP_905279.1	similar to GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:Y00443, GB:M29706, GB:S68144, GB:M60331, SP:P04553, PID:1335010, PID:190454, PID:190528, PID:35686, PID:642459, and PID:
NP_905280.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits
NP_905281.1	similar to GB:M77232, GB:X67309, GB:J03537, SP:P10660, PID:307393, PID:337516, and PID:36148; identified by sequence similarity; putative
NP_905282.1	similar to GP:19713115; identified by sequence similarity; putative
NP_905283.1	similar to SP:P13685, GB:D26562, GB:M20574, GB:S48039, PID:147117, PID:259663, PID:473802, GB:U00096, and PID:1786336; identified by sequence similarity; putative
NP_905286.1	similar to GP:19713109; identified by sequence similarity; putative
NP_905287.1	similar to GB:S70527, GB:L37374, SP:P39748, GB:X76771, and PID:642090; identified by sequence similarity; putative
NP_905291.1	similar to GB:D26185, SP:P37497, PID:467350, GB:AL009126, GB:U07447, SP:P01621, SP:P01623, SP:P06311, SP:P18136, PID:470430, PID:470554, PID:470562, PID:470568, PID:470576, PID:470578, PID:470580, PID:470584, PID:470586, PID:470598, PID:470618, PID:511004, PID:553478, PID:560766, PID:561703, PID:587346, PID:587352, PID:619431, PID:619433, PID:619617, PID:619618, PID:619761, PID:619762, PID:619767, PID:619768, PID:619769, PID:681900, PID:695533, PID:695536, PID:722418, PID:722424, PID:722462, PID:722476, PID:722494, PID:722500, PID:722518, PID:722522, PID:722536, PID:722580, PID:722582, PID:722584, PID:722596, PID:732740, PID:860992, and PID:860998; identified by sequence similarity; putative
NP_905292.1	similar to GB:U07447, SP:P01621, SP:P01623, SP:P06311, SP:P18136, PID:470430, PID:470554, PID:470562, PID:470568, PID:470576, PID:470578, PID:470580, PID:470584, PID:470586, PID:470598, PID:470618, PID:511004, PID:553478, PID:560766, PID:561703, PID:587346, PID:587352, PID:619431, PID:619433, PID:619617, PID:619618, PID:619761, PID:619762, PID:619767, PID:619768, PID:619769, PID:681900, PID:695533, PID:695536, PID:722418, PID:722424, PID:722462, PID:722476, PID:722494, PID:722500, PID:722518, PID:722522, PID:722536, PID:722580, PID:722582, PID:722584, PID:722596, PID:732740, PID:860992, and PID:860998; identified by sequence similarity; putative
NP_905293.1	similar to GB:U07447, SP:P01621, SP:P01623, SP:P06311, SP:P18136, PID:470430, PID:470554, PID:470562, PID:470568, PID:470576, PID:470578, PID:470580, PID:470584, PID:470586, PID:470598, PID:470618, PID:511004, PID:553478, PID:560766, PID:561703, PID:587346, PID:587352, PID:619431, PID:619433, PID:619617, PID:619618, PID:619761, PID:619762, PID:619767, PID:619768, PID:619769, PID:681900, PID:695533, PID:695536, PID:722418, PID:722424, PID:722462, PID:722476, PID:722494, PID:722500, PID:722518, PID:722522, PID:722536, PID:722580, PID:722582, PID:722584, PID:722596, PID:732740, PID:860992, and PID:860998; identified by sequence similarity; putative
NP_905294.1	similar to GB:X01563, SP:P02425, PID:42980, PID:606243, GB:U00096, and PID:1789705; identified by sequence similarity; putative
NP_905295.1	similar to GB:D10653, GB:L10373, GB:D29808, SP:P41732, PID:285901, and PID:475006; identified by sequence similarity; putative
NP_905296.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
NP_905297.1	similar to GB:U00039, SP:P28242, GB:X67639, PID:43280, PID:466632, GB:U00096, and PID:1789909; identified by sequence similarity; putative
NP_905301.1	similar to GB:U05888, PID:458314, and SP:Q45119; identified by sequence similarity; putative
NP_905303.1	similar to GB:L27624, GB:D29992, SP:P48307, PID:2078462, PID:441150, PID:484051, GB:L27624, GB:D29992, SP:P48307, PID:2078462, PID:441150, and PID:484051; identified by sequence similarity; putative
NP_905304.1	similar to GB:L19532, PID:388269, and PID:475429; identified by sequence similarity; putative
NP_905306.1	similar to SP:P00321; identified by sequence similarity; putative
NP_905311.1	catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway
NP_905316.1	similar to GB:L19999, GB:L19955, GB:X84654, GB:L15346, GB:U72196, SP:P50224, SP:P50225, SP:P50226, PID:1314740, PID:1575788, PID:179042, PID:1907312, PID:306455, PID:307343, PID:488285, PID:495487, PID:553649, PID:671534, PID:671642, PID:736379, PID:758595, PID:758597, PID:847763, PID:881503, and PID:881505; identified by sequence similarity; putative
NP_905318.1	similar to GB:X64229, SP:P35659, and PID:30503; identified by sequence similarity; putative
NP_905325.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
NP_905326.1	similar to GB:M82827, GB:X56058, SP:P29590, SP:P29591, SP:P29592, SP:P29593, SP:Q00755, and PID:182796; identified by sequence similarity; putative
NP_905327.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
NP_905331.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_905332.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
NP_905336.1	similar to GB:J03407, SP:P14373, PID:1903190, PID:337372, GB:X07282, SP:P10826, PID:184477, PID:32026, and PID:35883; identified by sequence similarity; putative
NP_905337.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
NP_905338.1	similar to SP:P27298, GB:M93984, PID:451277, PID:466635, GB:U00096, PID:1789913, GB:M57894, SP:P29072, PID:142685, and GB:AL009126; identified by sequence similarity; putative
NP_905340.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
NP_905343.1	identified by match to PFAM protein family HMM PF02397
NP_905344.1	similar to GP:18892817; identified by sequence similarity; putative
NP_905345.1	identified by match to TIGR protein family HMM TIGR01695
NP_905348.1	identified by match to TIGR protein family HMM TIGR01556
NP_905352.1	similar to GB:Z25430, and PID:405739; identified by sequence similarity; putative
NP_905354.1	similar to GB:U04847, and PID:440240; identified by sequence similarity; putative
NP_905363.1	similar to GB:D26562, SP:P02351, GB:V00343, PID:42842, PID:473824, GB:U00096, PID:1552746, PID:1786365, GB:D26562, SP:P02351, GB:V00343, PID:42842, PID:473824, GB:U00096, PID:1552746, and PID:1786365; identified by sequence similarity; putative
NP_905364.1	similar to GB:X63125, PID:402789, GB:X63125, and PID:402789; identified by sequence similarity; putative
NP_905371.1	similar to SP:P33107, and PID:44436; identified by sequence similarity; putative
NP_905372.1	identified by match to PFAM protein family HMM PF02754
NP_905374.1	identified by match to PFAM protein family HMM PF02589
NP_905381.1	similar to SP:P19371; identified by sequence similarity; putative
NP_905387.1	Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor
NP_905388.1	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine
NP_905395.1	identified by match to PFAM protein family HMM PF01381
NP_905396.1	identified by match to PFAM protein family HMM PF00216
NP_905399.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
NP_905402.1	similar to GB:Z36940, SP:P45492, and PID:535813; identified by sequence similarity; putative
NP_905404.1	identified by match to PFAM protein family HMM PF00075
NP_905411.1	Required for the de novo synthesis of pyroxidine via the pdxA branch; catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate
NP_905412.1	similar to GB:X74801, GB:U17104, SP:P49368, PID:609308, and PID:671527; identified by sequence similarity; putative
NP_905415.1	identified by match to TIGR protein family HMM TIGR01716
NP_905419.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADH; forms a homohexamer
NP_905425.1	similar to SP:P25921, and PID:150653; identified by sequence similarity; putative
NP_905427.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
NP_905430.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_905431.1	similar to GB:Z22606, PID:405799, and SP:P50001; identified by sequence similarity; putative
NP_905433.1	identified by match to TIGR protein family HMM TIGR00530
NP_905436.1	similar to GB:Z33058, and PID:530419; identified by sequence similarity; putative
NP_905439.1	involved in a recombinational process of DNA repair, independent of the recBC complex
NP_905442.1	similar to GB:L05425, PID:179285, GB:L05425, and PID:179285; identified by sequence similarity; putative
NP_905444.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
NP_905452.1	similar to GB:X67475, PID:42342, SP:P24185, GB:U00096, PID:1742409, PID:1742419, and PID:1787750; identified by sequence similarity; putative
NP_905453.1	identified by match to PFAM protein family HMM PF02274
NP_905454.1	similar to GB:L06132, SP:P21796, and PID:340199; identified by sequence similarity; putative
NP_905456.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
NP_905457.1	identified by match to PFAM protein family HMM PF00216
NP_905459.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
NP_905463.1	similar to GB:U22662, and PID:726513; identified by sequence similarity; putative
NP_905469.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
NP_905473.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
NP_905476.1	identified by match to TIGR protein family HMM TIGR01707
NP_905477.1	similar to GB:M67471, SP:P25146, PID:149674, PID:887026, PID:887868, PID:887874, SP:P23462, and PID:152000; identified by sequence similarity; putative
NP_905479.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
NP_905481.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
NP_905484.1	identified by match to PFAM protein family HMM PF00149
NP_905487.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
NP_905488.1	similar to GB:L19084, SP:P33668, PID:304942, GB:U00096, PID:1773180, PID:1786707, GB:D90277, GB:L00692, GB:M22433, GB:L00693, GB:D90278, SP:P40198, PID:219537, and PID:553220; identified by sequence similarity; putative
NP_905491.1	identified by match to PFAM protein family HMM PF04545
NP_905493.1	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate
NP_905495.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
NP_905497.1	similar to GP:8925307; identified by sequence similarity; putative
NP_905499.1	similar to SP:P32673, GB:U00006, PID:396297, GB:U00096, and PID:1790387; identified by sequence similarity; putative
NP_905501.1	similar to SP:P35633, GB:L20677, PID:304185, GB:L15189, GB:L11066, GB:D17027, GB:D17196, SP:P38646, and PID:292059; identified by sequence similarity; putative
NP_905503.1	similar to GB:L19532, PID:388269, and PID:475429; identified by sequence similarity; putative
NP_905504.1	similar to GB:L19532, PID:388269, and PID:475429; identified by sequence similarity; putative
NP_905505.1	similar to GB:J02933, GB:M13232, SP:P08709, PID:1000710, PID:180334, and PID:182801; identified by sequence similarity; putative
NP_905506.1	similar to GB:X13529, GB:U07236, GB:M36881, GB:X14055, SP:P06239, PID:187034, PID:34289, PID:34295, PID:349702, PID:35780, PID:460966, PID:553522, PID:775208, and PID:825687; identified by sequence similarity; putative
NP_905507.1	similar to SP:P00209; identified by sequence similarity; putative
NP_905509.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
NP_905510.1	similar to SP:P33912; identified by sequence similarity; putative
NP_905512.1	similar to GB:J03381, and SP:P10641; identified by sequence similarity; putative
NP_905513.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
NP_905515.1	similar to GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, PID:1789653, GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, and PID:1789653; identified by sequence similarity; putative
NP_905518.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
NP_905520.1	similar to GB:J03732, SP:P03813, PID:145322, PID:882733, PID:1128956, GB:U00096, and PID:1789205; identified by sequence similarity; putative
NP_905523.1	identified by match to PFAM protein family HMM PF00583
NP_905525.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
NP_905526.1	similar to GB:D31886, and PID:505100; identified by sequence similarity; putative
NP_905527.1	similar to GB:M22488, GB:L35279, GB:L35278, SP:P13497, PID:619424, GB:M22488, GB:L35279, GB:L35278, SP:P13497, and PID:619424; identified by sequence similarity; putative
NP_905529.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
NP_905530.1	Essential for efficient processing of 16S rRNA
NP_905531.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
NP_905533.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
NP_905535.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
NP_905542.1	similar to SP:P37338, GB:U00096, PID:1789018, SP:P37338, GB:U00096, and PID:1789018; identified by sequence similarity; putative
NP_905543.1	similar to SP:P37338, GB:U00096, and PID:1789018; identified by sequence similarity; putative
NP_905544.1	similar to SP:P37338, GB:U00096, and PID:1789018; identified by sequence similarity; putative
NP_905549.1	similar to GB:L08575, and PID:415256; identified by sequence similarity; putative
NP_905553.1	similar to GB:X60459, SP:P17181, PID:1247459, PID:1247461, PID:1567383, PID:1567385, PID:306914, PID:32672, GB:X60459, SP:P17181, PID:1247459, PID:1247461, PID:1567383, PID:1567385, PID:306914, and PID:32672; identified by sequence similarity; putative
NP_905554.1	similar to GB:J02938, GB:U13680, GB:X15954, GB:X15957, SP:P07864, PID:187074, PID:307120, and PID:535360; identified by sequence similarity; putative
NP_905556.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
NP_905557.1	functions in MreBCD complex in some organisms
NP_905558.1	involved in de novo purine biosynthesis
NP_905560.1	tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan
NP_905565.1	similar to GB:X16064, GB:L13806, SP:P13693, and PID:37496; identified by sequence similarity; putative
NP_905569.1	similar to GB:J04046, GB:X52606, GB:X52607, GB:X52608, SP:P02593, SP:P27482, PID:179810, PID:179884, PID:179888, PID:2055425, PID:531827, PID:665588, PID:825635, GB:M19311, SP:P02593, SP:P27482, PID:179810, PID:179884, PID:179888, PID:2055425, PID:531827, PID:665588, PID:825635, GB:M27319, GB:U11886, GB:U12022, GB:U16851, SP:P02593, SP:P27482, PID:179810, PID:179884, PID:179888, PID:2055425, PID:531827, PID:665588, and PID:825635; identified by sequence similarity; putative
NP_905571.1	similar to GB:X54057, and PID:48509; identified by sequence similarity; putative
NP_905572.1	similar to SP:P34210, and PID:550102; identified by sequence similarity; putative
NP_905573.1	similar to GB:X04526, GB:M36430, SP:P04901, SP:P11016, PID:31669, and PID:339937; identified by sequence similarity; putative
NP_905575.1	identified by match to PFAM protein family HMM PF00665
NP_905576.1	identified by match to PFAM protein family HMM PF00037
NP_905577.1	similar to GB:L10393, SP:P08048, SP:P17010, and PID:340436; identified by sequence similarity; putative
NP_905582.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
NP_905587.1	identified by match to TIGR protein family HMM TIGR01280
NP_905588.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
NP_905595.1	identified by match to PFAM protein family HMM PF02178
NP_905596.1	identified by match to TIGR protein family HMM TIGR01695
NP_905600.1	similar to GB:L25896, PID:451865, GB:L25896, and PID:451865; identified by sequence similarity; putative
NP_905610.1	similar to SP:P34001, and PID:1196943; identified by sequence similarity; putative
NP_905614.1	identified by match to TIGR protein family HMM TIGR01934
NP_905617.1	similar to GB:L22647, SP:P34995, and PID:410209; identified by sequence similarity; putative
NP_905640.1	similar to GP:16549048; identified by sequence similarity; putative
NP_905641.1	similar to SP:P33446, GB:X64876, and PID:313842; identified by sequence similarity; putative
NP_905648.1	similar to GB:M59757, SP:P25996, PID:143392, and GB:AL009126; identified by sequence similarity; putative
NP_905650.1	similar to SP:P29201, and PID:148781; identified by sequence similarity; putative
NP_905653.1	similar to GB:Z18899, GB:Z29633, PID:499594, PID:505400, and PID:553410; identified by sequence similarity; putative
NP_905659.1	similar to SP:P15756, and PID:43545; identified by sequence similarity; putative
NP_905662.1	similar to GB:L03728, SP:P22993, PID:147103, PID:152544, GB:X59798, GB:M73554, GB:S71637, SP:P24385, PID:179365, PID:181245, PID:307345, PID:312912, PID:35632, and PID:483601; identified by sequence similarity; putative
NP_905664.1	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA
NP_905666.1	similar to GB:X73039, SP:P35715, SP:P35717, SP:P48431, PID:312152, PID:854182, PID:938229, and PID:938234; identified by sequence similarity; putative
NP_905668.1	identified by match to TIGR protein family HMM TIGR01764
NP_905669.1	similar to GB:M98252, GB:L06419, SP:Q02809, and PID:190074; identified by sequence similarity; putative
NP_905671.1	similar to GB:U14003, SP:P33999, PID:537214, GB:U00096, and PID:1790833; identified by sequence similarity; putative
NP_905672.1	identified by match to TIGR protein family HMM TIGR01764
NP_905674.1	similar to GB:U02141, GB:X61535, GB:L43967, SP:P47474, PID:406334, PID:1045921, GB:U14003, SP:P39390, PID:537182, GB:U00096, and PID:1790798; identified by sequence similarity; putative
NP_905679.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
NP_905683.1	similar to GB:J03071, GB:A00501, GB:V00519, GB:M13438, GB:V00520, GB:J00148, GB:A12770, GB:A15072, GB:M14398, SP:P01241, SP:P01243, PID:183147, PID:183159, PID:490144, PID:512406, GB:J03071, GB:A00501, GB:V00519, GB:M13438, GB:V00520, GB:J00148, GB:A12770, GB:A15072, GB:M14398, SP:P01241, SP:P01243, PID:183147, PID:183159, PID:490144, and PID:512406; identified by sequence similarity; putative
NP_905684.1	similar to GB:M64355, GB:D13074, GB:L06880, PID:2358061, PID:292767, PID:339329, PID:407739, PID:619777, PID:975606, GB:M64355, GB:D13074, GB:L06880, PID:2358061, PID:292767, PID:339329, PID:407739, PID:619777, and PID:975606; identified by sequence similarity; putative
NP_905686.1	similar to GB:X77383, SP:P43234, and PID:574804; identified by sequence similarity; putative
NP_905690.1	similar to SP:P17430, GB:X52093, GB:X52950, and PID:47743; identified by sequence similarity; putative
NP_905692.1	similar to SP:P36563, PID:434583, PID:466739, GB:U00096, PID:1790029, SP:P36563, PID:434583, PID:466739, GB:U00096, and PID:1790029; identified by sequence similarity; putative
NP_905694.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
NP_905695.1	similar to SP:P02345, GB:X04500, GB:M15330, GB:K02770, GB:M54933, GB:X02532, GB:X56087, GB:X52431, GB:M15840, SP:P01584, PID:186288, PID:307043, PID:307045, PID:312408, PID:33790, PID:35663, and PID:386816; identified by sequence similarity; putative
NP_905698.1	similar to GB:X69292, GB:S67240, SP:P35749, PID:2104553, PID:2352947, and PID:36507; identified by sequence similarity; putative
NP_905700.1	similar to GB:J05243, GB:M18627, GB:M19725, GB:M24773, GB:X86901, GB:U26396, SP:Q13813, PID:178426, PID:179106, PID:1805280, PID:537331, PID:829111, PID:836669, GB:J05243, GB:M18627, GB:M19725, GB:M24773, GB:X86901, GB:U26396, SP:Q13813, PID:178426, PID:179106, PID:1805280, PID:537331, PID:829111, and PID:836669; identified by sequence similarity; putative
NP_905701.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
NP_905703.1	similar to GB:X80061, and PID:510823; identified by sequence similarity; putative
NP_905704.1	similar to SP:P25006, PID:1125639, SP:P25006, and PID:1125639; identified by sequence similarity; putative
NP_905709.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
NP_905710.1	similar to GB:L14437, SP:P39809, PID:451869, PID:1762336, and GB:AL009126; identified by sequence similarity; putative
NP_905711.1	similar to SP:P29134, and SP:P29134; identified by sequence similarity; putative
NP_905720.1	similar to GB:M60178, SP:P22865, PID:149525, and PID:512521; identified by sequence similarity; putative
NP_905721.1	similar to GP:19917917, SP:P25889, GB:U00096, and PID:1788469; identified by sequence similarity; putative
NP_905722.1	identified by match to TIGR protein family HMM TIGR01695
NP_905723.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
NP_905724.1	similar to GB:D00496, SP:P17167, and PID:216759; identified by sequence similarity; putative
NP_905726.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin)
NP_905727.1	similar to GB:U14003, SP:P39402, PID:537207, GB:U00096, and PID:1790826; identified by sequence similarity; putative
NP_905728.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
NP_905731.1	similar to GB:M89470, GB:L25597, SP:Q02962, PID:438650, and PID:553607; identified by sequence similarity; putative
NP_905732.1	similar to GB:M16937, GB:M30598, SP:P09629, SP:P31267, SP:P31268, and PID:306878; identified by sequence similarity; putative
NP_905733.1	hydrolyzes non-standard nucleotides such as xanthine and inosine
NP_905735.1	similar to GB:X70308, GB:D13079, GB:M99570, GB:L11162, GB:S61985, PID:2358033, PID:36884, PID:36894, PID:36901, PID:404053, PID:407751, PID:437035, PID:639839, PID:758615, PID:804775, PID:804776, PID:804777, and PID:940541; identified by sequence similarity; putative
NP_905737.1	similar to GB:S85655, GB:U17179, and SP:P35232; identified by sequence similarity; putative
NP_905741.1	identified by match to TIGR protein family HMM TIGR01698
NP_905742.1	similar to GB:M35130, SP:P14638, GB:M31474, and PID:150072; identified by sequence similarity; putative
NP_905743.1	catalyzes the reversible formation of fumarate and ubiquinol from succinate and ubiquinone
NP_905744.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
NP_905747.1	similar to GB:L10975, GB:L10975, PID:425446, GB:L10975, GB:L10975, and PID:425446; identified by sequence similarity; putative
NP_905748.1	similar to GB:M57707, GB:M38258, SP:P13631, SP:P22932, PID:190868, PID:190872, and PID:306887; identified by sequence similarity; putative
NP_905749.1	similar to GB:M64171, GB:X60678, PID:144537, PID:311996, PID:927405, and PID:1518659; identified by sequence similarity; putative
NP_905751.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_905757.1	similar to GB:X78412, SP:P45454, PID:498768, GB:X56997, GB:Y00361, SP:P02248, SP:P14793, PID:37565, PID:37567, PID:37569, and PID:825728; identified by sequence similarity; putative
NP_905765.1	identified by match to PFAM protein family HMM PF01451
NP_905773.1	similar to GB:M37435, GB:M27087, GB:M11038, GB:M11295, GB:M11296, GB:M64592, SP:P09603, PID:181135, PID:181144, PID:187463, PID:508986, PID:757917, PID:758781, GB:M37435, GB:M27087, GB:M11038, GB:M11295, GB:M11296, GB:M64592, SP:P09603, PID:181135, PID:181144, PID:187463, PID:508986, PID:757917, and PID:758781; identified by sequence similarity; putative
NP_905776.1	similar to GB:M13932, GB:M18000, SP:P08708, PID:337501, and PID:337503; identified by sequence similarity; putative
NP_905777.1	MDM; functions in conversion of succinate to propionate
NP_905784.1	similar to SP:P28910, PID:147625, PID:466617, GB:U00096, and PID:1789892; identified by sequence similarity; putative
NP_905785.1	similar to GB:U18321, SP:P51398, and PID:603764; identified by sequence similarity; putative
NP_905787.1	previously submitted to Genbank by Ross, et al as immunoreactive 51kD antigen PG52
NP_905794.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
NP_905795.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
NP_905800.1	similar to GB:Z27512, GB:Z14073, SP:P01764, PID:483870, PID:495944, PID:495993, PID:495995, PID:496014, PID:511000, PID:553412, PID:553422, PID:553456, PID:553461, PID:553468, PID:587277, PID:587307, PID:587314, PID:587318, PID:619625, PID:642584, PID:790809, PID:896272, PID:896273, PID:903667, PID:903675, PID:905377, PID:976299, and PID:976311; identified by sequence similarity; putative
NP_905803.1	identified by match to PFAM protein family HMM PF01230
NP_905805.1	similar to GB:X75342, and PID:406738; identified by sequence similarity; putative
NP_905811.1	Possibly an isoschizomer of LlaBIIM.
NP_905812.1	Possibly an isoschizomer of LlaBIIR.
NP_905815.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era
NP_905818.1	identified by match to PFAM protein family HMM PF04977
NP_905820.1	identified by match to PFAM protein family HMM PF00665
NP_905827.1	similar to GB:M96669, SP:Q04937, PID:149490, GB:X61177, SP:Q01344, PID:1247445, PID:1247447, PID:186343, PID:186345, PID:186388, PID:33840, PID:33844, PID:36466, and PID:825601; identified by sequence similarity; putative
NP_905828.1	similar to GB:X80506, SP:P45783, PID:516863, GB:X80506, SP:P45783, and PID:516863; identified by sequence similarity; putative
NP_905829.1	similar to SP:P31631, GB:M62363, and PID:150518; identified by sequence similarity; putative
NP_905831.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
NP_905832.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
NP_905833.1	identified by match to TIGR protein family HMM TIGR00199
NP_905835.1	similar to SP:P08063, PID:154718, and PID:154801; identified by sequence similarity; putative
NP_905836.1	identified by match to PFAM protein family HMM PF00383
NP_905837.1	similar to SP:P14250, and PID:148571; identified by sequence similarity; putative
NP_905838.1	similar to GB:L07024, and PID:142778; identified by sequence similarity; putative
NP_905839.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
NP_905840.1	similar to GB:D00173, GB:S46963, SP:P11712, SP:P11713, SP:P33259, SP:P33261, PID:181362, PID:181364, PID:181366, and PID:219571; identified by sequence similarity; putative
NP_905846.1	catalyzes the formation of fumarate from aspartate
NP_905848.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
NP_905849.1	similar to SP:P13467, SP:P16155, SP:P23732, SP:P17451, SP:P19542, SP:P06597, SP:P23114, SP:P23421, GB:X16007, SP:P08780, GB:J03813, GB:L35605, GB:L35606, GB:M14738, GB:M17342, GB:M33635, GB:M33636, GB:M35099, GB:M36533, GB:M58938, GB:X55700, GB:X62921, PID:1321799, PID:2076876, SP:P13467, SP:P16155, SP:P23732, SP:P17451, SP:P19542, SP:P06597, SP:P23114, SP:P23421, GB:X52080, SP:P08780, GB:J03813, GB:L35605, GB:L35606, GB:M14738, GB:M17342, GB:M33635, GB:M33636, GB:M35099, GB:M36533, GB:M58938, GB:X55700, GB:X62921, PID:1321799, PID:2076876, SP:P13467, SP:P16155, SP:P23732, SP:P17451, SP:P19542, SP:P06597, SP:P23114, SP:P23421, GB:X52557, SP:P08780, GB:J03813, GB:L35605, GB:L35606, GB:M14738, GB:M17342, GB:M33635, GB:M33636, GB:M35099, GB:M36533, GB:M58938, GB:X55700, GB:X62921, PID:1321799, and PID:2076876; identified by sequence similarity; putative
NP_905850.1	similar to GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, PID:1789653, GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, and PID:1789653; identified by sequence similarity; putative
NP_905853.1	identified by match to PFAM protein family HMM PF00754
NP_905858.1	catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis
NP_905860.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
NP_905861.1	similar to SP:P18501, and PID:39033; identified by sequence similarity; putative
NP_905863.1	identified by match to TIGR protein family HMM TIGR01575
NP_905864.2	part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
NP_905865.1	similar to GB:L06133, GB:L06476, SP:Q04656, PID:179253, PID:2052036, PID:2052038, PID:34705, PID:464228, PID:854136, and PID:987255; identified by sequence similarity; putative
NP_905867.1	carries the fatty acid chain in fatty acid biosynthesis
NP_905868.1	similar to GB:Y00711, GB:X13794, GB:X13795, GB:X13796, GB:X13797, GB:X13798, GB:X13799, GB:X13800, SP:P07195, PID:1200083, PID:34329, GB:Y00711, GB:X13794, GB:X13795, GB:X13796, GB:X13797, GB:X13798, GB:X13799, GB:X13800, SP:P07195, PID:1200083, and PID:34329; identified by sequence similarity; putative
NP_905870.1	similar to GB:X06614, GB:S57794, SP:P10276, PID:1335286, PID:35874, PID:36157, PID:825712, GB:X55330, GB:M64073, GB:X55762, GB:M64075, GB:M64076, GB:U21281, GB:X61959, GB:U21273, GB:U21274, GB:U21275, GB:U21276, GB:U21277, GB:U21278, GB:U21279, GB:U21280, SP:P20933, PID:183334, PID:28534, PID:34760, PID:553306, and PID:732508; identified by sequence similarity; putative
NP_905873.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
NP_905874.1	similar to SP:P23794, GB:X53263, PID:296865, PID:296866, GB:M17398, GB:M21941, GB:M21942, GB:Y00498, GB:M17397, GB:X51535, SP:P10632, PID:181326, PID:181368, PID:181370, PID:23885, PID:297404, and PID:30335; identified by sequence similarity; putative
NP_905876.1	similar to GB:M81651, GB:M81652, SP:Q02383, PID:1147570, PID:307418, and PID:338239; identified by sequence similarity; putative
NP_905878.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
NP_905879.1	similar to GB:L29189, SP:P39215, PID:459688, PID:1934800, and GB:AL009126; identified by sequence similarity; putative
NP_905880.1	similar to GB:J05412, GB:M18963, GB:L08010, GB:J05413, SP:P05451, SP:P48304, PID:190979, PID:190981, PID:474306, PID:474308, PID:487726, and PID:623413; identified by sequence similarity; putative
NP_905881.1	similar to GB:M69197, GB:X00442, GB:L29394, GB:K01763, GB:X00637, GB:X01793, GB:X01786, GB:X02206, GB:X01789, GB:X01791, GB:X00606, GB:M13908, GB:K00422, GB:M12387, GB:M10935, SP:P00737, SP:P00738, PID:1212947, PID:306880, and PID:758071; identified by sequence similarity; putative
NP_905882.1	similar to GB:M10058, SP:P07306, and PID:179079; identified by sequence similarity; putative
NP_905883.1	functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor
NP_905889.1	similar to GB:L17071, SP:Q07602, GB:L17073, and PID:310302; identified by sequence similarity; putative
NP_905893.1	identified by match to TIGR protein family HMM TIGR01695
NP_905895.1	similar to GB:X72760, SP:P55268, PID:1103585, PID:1335202, and PID:288401; identified by sequence similarity; putative
NP_905900.1	similar to SP:P00437; identified by sequence similarity; putative
NP_905902.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex
NP_905903.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex
NP_905904.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex
NP_905905.1	similar to SP:P19371; identified by sequence similarity; putative
NP_905906.1	similar to GB:Z31397, PID:1335178, PID:1335181, PID:32850, PID:33129, PID:505450, PID:510299, PID:510301, PID:510303, PID:510392, PID:510394, PID:510396, PID:510398, PID:510400, PID:510404, PID:553403, PID:577484, PID:587249, PID:587259, PID:940518, PID:940520, PID:998277, GB:J05249, SP:P15927, and PID:337350; identified by sequence similarity; putative
NP_905907.1	similar to GB:L28806, GB:Z29976, PID:454966, and PID:515737; identified by sequence similarity; putative
NP_905908.1	similar to SP:P37737, and PID:150760; identified by sequence similarity; putative
NP_905911.1	catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA
NP_905912.1	similar to GB:L19532, PID:388269, and PID:475429; identified by sequence similarity; putative
NP_905913.1	similar to GB:X52947, GB:M65188, SP:P17302, PID:181209, and PID:29917; identified by sequence similarity; putative
NP_905914.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
NP_905915.1	identified by match to PFAM protein family HMM PF02525
NP_905916.1	similar to SP:P30692, PID:45253, SP:P30692, and PID:45253; identified by sequence similarity; putative
NP_905919.1	catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552
NP_905922.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
NP_905927.1	similar to GB:M68061, SP:P04740, PID:147073, and PID:41881; identified by sequence similarity; putative
NP_905929.1	similar to GB:M55263, SP:P22322, PID:143022, PID:403481, PID:1303801, GB:AL009126, GB:X51445, GB:X56653, GB:X51440, SP:P02735, PID:1160969, PID:337743, PID:36310, PID:36317, PID:36321, PID:758679, PID:758681, PID:758683, PID:825714, PID:825715, PID:825716, PID:825717, and PID:939926; identified by sequence similarity; putative
NP_905931.1	similar to GB:L05628, GB:X78338, SP:P33527, PID:1835659, and PID:1871200; identified by sequence similarity; putative
NP_905932.1	similar to GB:D26185, SP:P26497, GB:M59938, PID:143640, PID:40031, PID:467380, and GB:AL009126; identified by sequence similarity; putative
NP_905933.1	similar to SP:P31128; identified by sequence similarity; putative
NP_905934.1	similar to GB:S48322, GB:X68059, SP:Q04968, SP:Q09088, GB:L36036, GB:S72439, GB:X62161, GB:X62387, GB:X65599, GB:X68540, GB:X69323, GB:X70365, GB:X81047, GB:Z29087, PID:1235758, PID:288383, PID:288389, PID:39387, PID:39389, PID:436060, PID:441227, PID:483557, PID:809623, PID:984066, PID:984072, PID:984074, PID:688403, PID:1762839, and PID:1762841; identified by sequence similarity; putative
NP_905942.1	similar to GB:X52592, and PID:46994; identified by sequence similarity; putative
NP_905944.1	similar to GB:U02373, PID:407279, and PID:1100880; identified by sequence similarity; putative
NP_905946.1	similar to SP:P13063, and SP:P13064; identified by sequence similarity; putative
NP_905947.1	similar to GP:19916677; identified by sequence similarity; putative
NP_905948.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
NP_905956.1	similar to GB:L11373, GB:L11371, GB:L11372, PID:307329, PID:387677, GB:L11373, GB:L11371, GB:L11372, PID:307329, and PID:387677; identified by sequence similarity; putative
NP_905958.1	similar to SP:P11430, SP:P16529, GB:S51490, GB:D00217, and PID:262707; identified by sequence similarity; putative
NP_905960.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
NP_905963.1	similar to GB:L20470, GB:L22431, GB:D16495, GB:D16508, GB:D16510, GB:D16512, GB:D16514, GB:D16516, GB:D16518, GB:D16520, GB:D16522, GB:D16523, GB:D16524, GB:D16525, GB:D16526, GB:D16527, GB:D16528, GB:D16529, GB:D16530, GB:D16531, GB:D16532, GB:D16493, SP:P98155, PID:391734, PID:407221, PID:409426, and PID:437387; identified by sequence similarity; putative
NP_905965.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
NP_905966.1	similar to GB:M36711, GB:M61156, GB:X77343, and SP:P05549; identified by sequence similarity; putative
NP_905967.1	similar to SP:P02928, GB:M12644, GB:J01648, GB:M12637, GB:V00303, GB:X03923, and PID:146770; identified by sequence similarity; putative
NP_905969.1	similar to GB:M63675, SP:Q00561, PID:149367, and PID:149422; identified by sequence similarity; putative
NP_905970.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
NP_905972.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
NP_905981.1	methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
NP_905982.1	similar to SP:P26236, and PID:46105; identified by sequence similarity; putative
NP_905985.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
NP_905986.2	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
NP_905987.1	Catalyzes the phosphorylation of UMP to UDP
NP_905988.1	similar to GB:X58178, GB:U20101, GB:U20102, GB:U20103, GB:U20104, GB:X66816, and PID:47363; identified by sequence similarity; putative
NP_905992.1	is a component of the macrolide binding site in the peptidyl transferase center
NP_905993.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
NP_905994.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
NP_905995.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
NP_905996.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
NP_905997.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif
NP_905998.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
NP_906000.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
NP_906001.1	late assembly protein
NP_906002.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
NP_906003.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
NP_906004.1	binds 5S rRNA along with protein L5 and L25
NP_906005.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
NP_906006.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NP_906007.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
NP_906008.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
NP_906009.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
NP_906010.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
NP_906011.1	primary binding protein; helps mediate assembly; involved in translation fidelity
NP_906012.1	one of the stabilizing components for the large ribosomal subunit
NP_906013.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
NP_906014.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
NP_906015.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
NP_906016.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NP_906017.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
NP_906018.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
NP_906019.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
NP_906020.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
NP_906021.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
NP_906022.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
NP_906023.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
NP_906024.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
NP_906026.1	similar to GB:M15815, SP:P10336, PID:142352, and PID:142385; identified by sequence similarity; putative
NP_906028.1	similar to SP:P33786, and PID:48912; identified by sequence similarity; putative
NP_906029.1	identified by match to TIGR protein family HMM TIGR01696
NP_906031.1	similar to GB:M19169, GB:J03870, SP:P01037, PID:337752, and PID:386825; identified by sequence similarity; putative
NP_906032.1	similar to GB:M80712, SP:P23619, and PID:141831; identified by sequence similarity; putative
NP_906033.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_906034.1	similar to GB:X07856, and PID:44531; identified by sequence similarity; putative
NP_906035.1	similar to GB:M27725, SP:P13719, and PID:145697; identified by sequence similarity; putative
NP_906038.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
NP_906039.1	required for 70S ribosome assembly
NP_906041.1	similar to SP:P37719, GB:X54676, and PID:455537; identified by sequence similarity; putative
NP_906043.1	similar to GB:X54868, SP:P26715, PID:35059, GB:X54868, SP:P26715, and PID:35059; identified by sequence similarity; putative
NP_906044.1	similar to GB:L12710, and PID:414576; identified by sequence similarity; putative
NP_906050.1	similar to GB:M76559, SP:P54289, and PID:179762; identified by sequence similarity; putative
NP_906055.1	similar to SP:P30329, and PID:150728; identified by sequence similarity; putative
NP_906058.1	identified by match to TIGR protein family HMM TIGR01881
NP_906064.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
NP_906065.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NP_906066.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
NP_906067.1	similar to GB:M67468, GB:S65791, GB:L29074, GB:X69962, SP:Q06787, PID:388726, PID:388728, PID:388734, PID:388736, PID:388738, PID:388740, PID:388742, PID:388744, PID:388752, PID:388754, PID:457239, PID:553289, PID:553290, and PID:553291; identified by sequence similarity; putative
NP_906068.1	similar to GB:S68409, and PID:545046; identified by sequence similarity; putative
NP_906071.1	similar to GB:U01032, and PID:393012; identified by sequence similarity; putative
NP_906072.1	similar to GB:X02747, GB:M15656, GB:M15657, GB:K01177, GB:X00270, SP:P05062, PID:178353, PID:178357, PID:2160383, PID:28420, PID:28617, and PID:563884; identified by sequence similarity; putative
NP_906073.1	similar to GB:X02747, GB:M15656, GB:M15657, GB:K01177, GB:X00270, SP:P05062, PID:178353, PID:178357, PID:2160383, PID:28420, PID:28617, and PID:563884; identified by sequence similarity; putative
NP_906075.1	similar to GB:X76942, GB:U41740, GB:X76942, PID:1213484, and PID:439656; identified by sequence similarity; putative
NP_906076.1	similar to GB:M19267, GB:M19713, GB:M19714, GB:M19715, SP:P06753, SP:P07951, SP:P09493, SP:P09494, PID:339954, and PID:339956; identified by sequence similarity; putative
NP_906079.1	identified by match to TIGR protein family HMM TIGR00613
NP_906081.1	similar to SP:Q04733; identified by sequence similarity; putative
NP_906082.1	similar to SP:P33962, PID:43662, PID:1154786, SP:P33962, PID:43662, and PID:1154786; identified by sequence similarity; putative
NP_906083.1	similar to GB:M63594, SP:P29236, PID:150688, GB:M63594, SP:P29236, and PID:150688; identified by sequence similarity; putative
NP_906084.1	identified by match to TIGR protein family HMM TIGR01696
NP_906087.1	identified by match to PFAM protein family HMM PF03787
NP_906088.1	similar to GB:M63264, SP:P26900, PID:142517, PID:1303987, and GB:AL009126; identified by sequence similarity; putative
NP_906091.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
NP_906098.1	identified by match to PFAM protein family HMM PF05146
NP_906099.1	similar to SP:P06519, PID:455334, and PID:1145786; identified by sequence similarity; putative
NP_906100.1	similar to GB:L19221, and PID:410147; identified by sequence similarity; putative
NP_906102.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
NP_906105.1	similar to GB:L10970, GB:L10970, PID:425436, GB:L10970, GB:L10970, PID:425436, SP:P28056, and PID:38963; identified by sequence similarity; putative
NP_906117.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
NP_906119.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
NP_906122.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
NP_906123.1	similar to GB:X63753, GB:S47238, GB:S47239, GB:S47240, GB:S79056, SP:P18583, PID:338290, and PID:36546; identified by sequence similarity; putative
NP_906124.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
NP_906127.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
NP_906130.1	similar to GB:X13543, and GB:X13541; identified by sequence similarity; putative
NP_906140.1	similar to GB:J01614, SP:P03024, GB:V00280, PID:146068, PID:41534, PID:882730, GB:U00096, and PID:1789202; identified by sequence similarity; putative
NP_906142.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
NP_906146.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_906148.1	SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
NP_906149.1	this fusion consists of methionine sulfoxide A reductase at the N-terminus and B at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion
NP_906151.1	similar to SP:P38100, and PID:1750387; identified by sequence similarity; putative
NP_906152.1	identified by match to TIGR protein family HMM TIGR00526
NP_906157.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
NP_906167.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center
NP_906168.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
NP_906170.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
NP_906171.1	similar to GB:Z36940, PID:535808, GB:Z36940, and PID:535808; identified by sequence similarity; putative
NP_906175.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
NP_906176.1	identified by match to PFAM protein family HMM PF02894
NP_906177.1	identified by match to PFAM protein family HMM PF00753
NP_906182.1	similar to GB:D13816, SP:Q08637, PID:391682, PID:487279, GB:D13816, SP:Q08637, PID:391682, and PID:487279; identified by sequence similarity; putative
NP_906184.1	identified by match to PFAM protein family HMM PF00665
NP_906188.1	similar to GB:M15518, GB:D01096, GB:A01465, GB:A04051, GB:A07197, GB:V00570, GB:K03021, GB:L00153, GB:L00141, GB:L00142, GB:L00143, GB:L00144, GB:L00145, GB:L00146, GB:L00147, GB:L00148, GB:L00149, GB:L00150, GB:L00151, GB:L00152, GB:S77144, SP:P00750, PID:190032, PID:2285954, PID:339818, PID:339834, PID:339839, PID:340177, PID:345129, PID:37244, PID:412165, PID:441174, and PID:575655; identified by sequence similarity; putative
NP_906190.1	similar to GB:M64978, and PID:150553; identified by sequence similarity; putative
NP_906191.1	similar to GB:X75411, SP:P39466, and PID:415999; identified by sequence similarity; putative
NP_906194.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
NP_906195.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
NP_906196.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
NP_906197.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
NP_906199.1	identified by match to PFAM protein family HMM PF01522
NP_906200.1	similar to GB:D10668, SP:P29537, PID:216714, GB:D10668, SP:P29537, and PID:216714; identified by sequence similarity; putative
NP_906201.1	Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine
NP_906208.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
NP_906209.1	similar to GB:M61877, GB:M11049, GB:M61775, GB:M13233, SP:P02549, PID:182243, PID:338438, PID:460309, and PID:553648; identified by sequence similarity; putative
NP_906210.1	identified by match to PFAM protein family HMM PF02657
NP_906214.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
NP_906216.1	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_906220.1	similar to GB:S68805, SP:P50440, and PID:791049; identified by sequence similarity; putative
NP_906226.1	similar to GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, PID:1789653, GB:M32214, SP:P02905, GB:M83198, GB:X14825, PID:145174, PID:145890, PID:145892, PID:41362, PID:606195, GB:U00096, and PID:1789653; identified by sequence similarity; putative
NP_906227.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
NP_906228.1	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
NP_906229.1	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm
NP_906230.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
NP_906231.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
NP_906232.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
NP_906233.1	similar to GB:D13633, and PID:286013; identified by sequence similarity; putative
NP_906234.1	identified by match to PFAM protein family HMM PF03965
NP_906235.1	similar to GB:M57417, and PID:188878; identified by sequence similarity; putative
NP_906236.1	similar to GB:X14448, GB:L35265, GB:M13571, GB:X16889, SP:P06280, PID:1684916, PID:178246, PID:31756, PID:553299, and PID:757912; identified by sequence similarity; putative
NP_906237.1	similar to GB:L13923, GB:X63556, GB:L19896, SP:P35555, PID:1335064, and PID:306746; identified by sequence similarity; putative
NP_906242.1	similar to GB:M33782, SP:P19484, PID:553790, and SP:P05974; identified by sequence similarity; putative
NP_906243.1	similar to SP:P27029, GB:X57299, and PID:47906; identified by sequence similarity; putative
NP_906244.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
NP_906245.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
NP_906248.1	similar to SP:P33159, GB:X68014, and PID:40807; identified by sequence similarity; putative
NP_906251.1	similar to GB:M31917, SP:P26879, PID:149688, GB:M31917, SP:P26879, and PID:149688; identified by sequence similarity; putative
NP_906252.1	similar to GB:X52520, GB:X52509, SP:P17735, PID:1217965, PID:36713, and PID:37502; identified by sequence similarity; putative
NP_906254.1	similar to GB:M19480, GB:M19481, SP:P19883, and PID:182721; identified by sequence similarity; putative
NP_906256.1	similar to GB:D26185, SP:P37464, PID:467403, and GB:AL009126; identified by sequence similarity; putative
NP_906258.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
NP_906259.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
NP_906264.1	similar to GB:M23245, SP:P07773, and PID:141753; identified by sequence similarity; putative
NP_906265.1	similar to GB:M23245, SP:P07773, and PID:141753; identified by sequence similarity; putative
NP_906266.1	similar to GB:L23283, SP:P01764, SP:P01767, PID:483870, PID:495944, PID:495993, PID:496012, PID:496014, PID:505431, PID:507337, PID:509800, PID:511000, PID:520409, PID:520410, PID:547525, PID:547528, PID:547545, PID:553379, PID:553406, PID:553408, PID:553412, PID:553422, PID:553434, PID:553435, PID:553436, PID:553437, PID:553438, PID:553439, PID:553443, PID:553445, PID:553446, PID:553453, PID:553455, PID:553472, PID:563648, PID:567114, PID:567121, PID:567123, PID:567127, PID:567169, PID:567173, PID:567177, PID:587261, PID:587265, PID:587269, PID:587271, PID:587275, PID:587294, PID:587296, PID:587302, PID:587305, PID:587307, PID:587318, PID:619425, PID:619625, PID:619627, PID:619629, PID:619630, PID:619779, PID:642584, PID:773612, PID:773618, PID:773638, PID:790801, PID:790805, PID:790809, PID:806834, PID:860973, PID:860977, PID:896272, PID:896273, PID:901824, PID:901825, PID:903667, PID:903675, PID:905375, PID:905377, PID:939890, PID:939891, PID:939894, PID:940526, PID:945217, PID:976299, PID:976304, PID:976
NP_906267.1	similar to GB:M23245, SP:P07773, and PID:141753; identified by sequence similarity; putative