-- dump date 20250217_002226 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP013187.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP013187.1.REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of PseudoalteromonasREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolicaREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: JapanREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: waterREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: JapanREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploidREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free livingREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotrophREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobeREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencingREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigsREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97xREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistryREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16 Pseudo Genes (internal stop) :: 4 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16 Pseudo Genes (internal stop) :: 4 of 16 Pseudo Genes (multiple problems) :: 1 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16 Pseudo Genes (internal stop) :: 4 of 16 Pseudo Genes (multiple problems) :: 1 of 16 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP013187.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16 Pseudo Genes (internal stop) :: 4 of 16 Pseudo Genes (multiple problems) :: 1 of 16 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP013188.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP013188.1.REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of PseudoalteromonasREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolicaREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: JapanREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: waterREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: JapanREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploidREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free livingREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotrophREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobeREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencingREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigsREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97xREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistryREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16 Pseudo Genes (internal stop) :: 4 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16 Pseudo Genes (internal stop) :: 4 of 16 Pseudo Genes (multiple problems) :: 1 of 16REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16 Pseudo Genes (internal stop) :: 4 of 16 Pseudo Genes (multiple problems) :: 1 of 16 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP013188.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Genome sequencing of Pseudoalteromonas phenolica lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: water geo_loc_name :: Japan collection_date :: 1999-07-30 env_biome :: ENVO:01000046 env_feature :: ENVO:00000098 env_material :: ENVO:00002149 ploidy :: haploid num_replicons :: 2 ref_biomaterial :: PMID 12710630 source_mat_id :: KCTC 12086 biotic_relationship :: free living trophic_level :: chemoheterotroph rel_to_oxygen :: aerobe isol_growth_condt :: PMID 12710630 sequencing_meth :: PacBio RS II sequencing assembly :: SMRT Analysis v2.3.0 finishing_strategy :: complete; 97X coverage; 2 contigs annot_source :: prodigal v2.6.1 ##MIGS-Data-END## ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 Genome Coverage :: 97x Sequencing Technology :: PacBio RS II with P6-C4 chemistry ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 07:53:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,325 CDSs (total) :: 4,180 Genes (coding) :: 4,164 CDSs (with protein) :: 4,164 Genes (RNA) :: 145 rRNAs :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs :: 10, 9, 9 (5S, 16S, 23S) tRNAs :: 113 ncRNAs :: 4 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 3 of 16 Pseudo Genes (incomplete) :: 11 of 16 Pseudo Genes (internal stop) :: 4 of 16 Pseudo Genes (multiple problems) :: 1 of 16 ##Genome-Annotation-Data-END## COMPLETENESS: full length.