-- dump date 20240506_042424 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP046621.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP046621.1.REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: noneREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina IseqxREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4 Pseudo Genes (total) :: 36REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 26 of 36REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 26 of 36 Pseudo Genes (internal stop) :: 5 of 36REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 26 of 36 Pseudo Genes (internal stop) :: 5 of 36 Pseudo Genes (multiple problems) :: 12 of 36REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 26 of 36 Pseudo Genes (internal stop) :: 5 of 36 Pseudo Genes (multiple problems) :: 12 of 36 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP046621.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler-Hybrid v. 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: none Genome Coverage :: 60.00x Nanopore, 177.43x Illumina Iseqx Sequencing Technology :: Oxford Nanopore & Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/18/2024 02:40:28 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,110 CDSs (total) :: 5,017 Genes (coding) :: 4,981 CDSs (with protein) :: 4,981 Genes (RNA) :: 93 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 71 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 26 of 36 Pseudo Genes (internal stop) :: 5 of 36 Pseudo Genes (multiple problems) :: 12 of 36 ##Genome-Annotation-Data-END## COMPLETENESS: full length.