-- dump date 20140620_005008 -- class Genbank::Gene -- table gene_note -- id note 12960418 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12960468 type I secretion system ATPase; this gene contains a frame shift which may be the result of a sequencing error; identified by similarity to GB:ABA71879.1 12960659 peptidase M23B; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF01551 12960737 type IV pilus biogenesis protein PilM, internal deletion; this gene model represents a disrupted reading frame with multiple genetic anomalies; identified by similarity to GB:AAG08429.1 12962085 putative addiction module killer protein; this gene contains a frame shift which may be the result of a sequencing error 12957979 RNA polymerase sigma factor RpoS, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P0A2E5; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02394; match to protein family HMM TIGR02937 12958130 hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error; identified by glimmer; putative 12958134 hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error; identified by glimmer; putative 12958146 hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error; identified by glimmer; putative 12958147 hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error; identified by glimmer; putative 12958155 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12958175 RecF/RecN/SMC N terminal domain protein; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF02463 12958196 hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error; identified by glimmer; putative 12958206 addiction module toxin, putative; this gene contains a premature stop which is not the result of sequencing error 12958377 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12958484 protein of unknown function, DUF1006 family; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF06224 12958606 transporter, major facilitator family; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF07690 12958610 Appears to have a 300AA insertion in the protein. Likely not a functional protein.; alkaline protease, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:AAC38255.2; match to protein family HMM PF00353; match to protein family HMM PF08548 12958920 Aha1 domain superfamily; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF08327 12958921 Aha1 domain superfamily; this gene contains a frame shift which may be the result of a sequencing error 12958973 conserved hypothetical protein; this gene contains a premature stop which may be the result of a sequencing error 12959274 lipoprotein, putative; this region contains one or more premature stops and/or frameshifts 12959289 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12960974 chemotaxis sensory transducer; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF08269 12961017 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12961082 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error; identified by similarity to GB:CAK16165.1 12961243 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12961321 gamma-glutamyltransferase; this gene contains a premature stop which may be the result of a sequencing error; identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066 12961322 gamma-glutamyltranspeptidase; this gene contains a premature stop which may be the result of a sequencing error 12961346 diguanylate cyclase; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 12961347 diguanylate cyclase; this gene contains a frame shift which may be the result of a sequencing error 12961405 conserved hypothetical protein; this gene contains a premature stop which may be the result of a sequencing error 12957207 IS222-like transposase, OrfA, fragment; this gene contains a frame shift which may be the result of a sequencing error 12957298 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12957385 membrane protein, putative; this gene contains a frame shift which may be the result of a sequencing error 12957386 membrane protein, putative; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00892 12957412 acyl-CoA synthetase family member 2; this gene contains a frame shift which may be the result of a sequencing error 12957565 p-hydroxyphenylacetate hydroxylase C1, reductase component, fragment; this gene model represents a disrupted reading frame with multiple genetic anomalies; identified by similarity to GB:AAS75430.1; match to protein family HMM PF01613 12957722 IS222-like transposase, OrfB; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00665 12957748 alcohol dehydrogenase zinc-binding domain protein; this gene contains a frame shift which may be the result of a sequencing error 12957749 alcohol dehydrogenase, zinc-binding domain protein; this gene contains a frame shift which may be the result of a sequencing error 12957756 transcriptional regulator, TetR family; this region contains one or more premature stops and/or frameshifts 12958839 putative siderophore biosynthesis protein; this gene contains a frame shift which may be the result of a sequencing error 12958840 siderophore biosynthesis protein, IucA/IucC family; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF04183 12959052 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12959321 conserved hypothetical protein; this gene contains a premature stop which may be the result of a sequencing error 12959356 argininosuccinate lyase 1 (arginosuccinase 1) (asal 1); this gene contains a frame shift which may be the result of a sequencing error 12959357 argininosuccinate lyase; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838 12959633 hemolysin activator HlyB; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF08479 12959634 hemolysin activator HlyB; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF03865 12959817 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12959818 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error 12961425 response regulator; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00072 12961810 conserved hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00805 12961813 IS222-like transposase, OrfB; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00665 12961862 transcriptional regulator, GntR family; this gene contains a premature stop which may be the result of a sequencing error; identified by match to protein family HMM PF00155; match to protein family HMM PF00392