-- dump date   	20140620_005732
-- class       	Genbank::Feature
-- table       	feature
-- table       	main
-- field 1	id
-- field 2	type
-- field 3	name
-- field 4	contig
-- field 5	start_pos
-- field 6	end_pos
-- field 7	strand
-- field 8	description
-- field 9	chrom_position
-- field 10	organism
-- field 11	GeneID
-- header
-- id	type	name	contig	start_pos	end_pos	strand	description	chrom_position	organism	GeneID
399739000001	SEQ_END	SEQ_END	NC_009439.1	5072807	5072807	DR	NC_009439.1; contig end	5072807..5072807	Pseudomonas mendocina ymp	<NULL_VALUE>
YP_001185508.1	CDS	dnaA	NC_009439.1	82	1566	D	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein	82..1566	Pseudomonas mendocina ymp	5105694
YP_001185509.1	CDS	Pmen_0002	NC_009439.1	1601	2704	D	binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta	1601..2704	Pseudomonas mendocina ymp	5106313
YP_001185510.1	CDS	recF	NC_009439.1	2712	3815	D	Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F	2712..3815	Pseudomonas mendocina ymp	5106678
YP_001185511.1	CDS	gyrB	NC_009439.1	3820	6240	D	negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B	3820..6240	Pseudomonas mendocina ymp	5106679
YP_001185512.1	CDS	Pmen_0005	NC_009439.1	6506	7438	R	PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase	complement(6506..7438)	Pseudomonas mendocina ymp	5106680
YP_001185513.1	CDS	Pmen_0006	NC_009439.1	7440	8063	R	PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase	complement(7440..8063)	Pseudomonas mendocina ymp	5106681
YP_001185514.1	CDS	Pmen_0007	NC_009439.1	8073	8507	R	hypothetical protein	complement(8073..8507)	Pseudomonas mendocina ymp	5106682
YP_001185515.1	CDS	Pmen_0008	NC_009439.1	8497	9834	R	PFAM: phosphoesterase, PA-phosphatase related; Dual specificity protein phosphatase; dual specificity protein phosphatase	complement(8497..9834)	Pseudomonas mendocina ymp	5106683
YP_001185516.1	CDS	Pmen_0009	NC_009439.1	9834	11588	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(9834..11588)	Pseudomonas mendocina ymp	5106684
YP_001185517.1	CDS	Pmen_0010	NC_009439.1	11614	12219	R	PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase	complement(11614..12219)	Pseudomonas mendocina ymp	5106685
YP_001185518.1	CDS	Pmen_0011	NC_009439.1	12430	13197	R	PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase	complement(12430..13197)	Pseudomonas mendocina ymp	5106686
YP_001185519.1	CDS	Pmen_0012	NC_009439.1	13211	13741	R	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase	complement(13211..13741)	Pseudomonas mendocina ymp	5106687
YP_001185520.1	CDS	glyS	NC_009439.1	13811	15865	R	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta	complement(13811..15865)	Pseudomonas mendocina ymp	5106688
YP_001185521.1	CDS	glyQ	NC_009439.1	15862	16809	R	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha	complement(15862..16809)	Pseudomonas mendocina ymp	5106689
YP_001185522.1	CDS	Pmen_0015	NC_009439.1	17057	17623	D	TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I	17057..17623	Pseudomonas mendocina ymp	5106690
YP_001185523.2	CDS	Pmen_0016	NC_009439.1	17717	18604	D	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase	17717..18604	Pseudomonas mendocina ymp	5106691
YP_001185524.1	CDS	Pmen_0017	NC_009439.1	18721	18987	D	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	18721..18987	Pseudomonas mendocina ymp	5106692
YP_001185525.1	CDS	Pmen_0018	NC_009439.1	19365	19931	D	PFAM: NLP/P60 protein; NLP/P60 protein	19365..19931	Pseudomonas mendocina ymp	5106693
YP_001185526.1	CDS	Pmen_0019	NC_009439.1	20108	20545	D	PFAM: Tir chaperone family protein; TIR chaperone family protein	20108..20545	Pseudomonas mendocina ymp	5106694
YP_001185527.1	CDS	Pmen_0020	NC_009439.1	20545	22776	D	hypothetical protein	20545..22776	Pseudomonas mendocina ymp	5106695
YP_001185528.1	CDS	Pmen_0021	NC_009439.1	22972	23322	R	hypothetical protein	complement(22972..23322)	Pseudomonas mendocina ymp	5106696
YP_001185529.1	CDS	Pmen_0022	NC_009439.1	23325	23528	R	hypothetical protein	complement(23325..23528)	Pseudomonas mendocina ymp	5106697
YP_001185530.1	CDS	Pmen_0023	NC_009439.1	23528	25618	R	TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein; YscC/HrcC family type III secretion outer membrane protein	complement(23528..25618)	Pseudomonas mendocina ymp	5106698
YP_001185531.1	CDS	Pmen_0024	NC_009439.1	25620	26045	R	hypothetical protein	complement(25620..26045)	Pseudomonas mendocina ymp	5106699
YP_001185532.1	CDS	Pmen_0025	NC_009439.1	26032	26256	R	hypothetical protein	complement(26032..26256)	Pseudomonas mendocina ymp	5106700
YP_001185533.1	CDS	Pmen_0026	NC_009439.1	26417	27004	R	TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; PFAM: HrpE family protein; HrpE/YscL family type III secretion apparatus protein	complement(26417..27004)	Pseudomonas mendocina ymp	5106701
YP_001185534.1	CDS	Pmen_0027	NC_009439.1	26994	27527	R	hypothetical protein	complement(26994..27527)	Pseudomonas mendocina ymp	5106702
YP_001185535.1	CDS	Pmen_0028	NC_009439.1	27524	28342	R	TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; YscJ/HrcJ family type III secretion apparatus lipoprotein	complement(27524..28342)	Pseudomonas mendocina ymp	5106703
YP_001185536.1	CDS	Pmen_0029	NC_009439.1	28353	28721	R	TIGRFAM: type III secretion apparatus protein, YscI/HrpB family; YscI/HrpB family type III secretion apparatus protein	complement(28353..28721)	Pseudomonas mendocina ymp	5106704
YP_001185537.1	CDS	Pmen_0030	NC_009439.1	28765	29664	R	PFAM: HrpZ family protein; HrpZ family protein	complement(28765..29664)	Pseudomonas mendocina ymp	5106705
YP_001185538.1	CDS	Pmen_0031	NC_009439.1	29716	30009	R	hypothetical protein	complement(29716..30009)	Pseudomonas mendocina ymp	5106706
YP_001185539.1	CDS	Pmen_0032	NC_009439.1	30305	31210	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator	complement(30305..31210)	Pseudomonas mendocina ymp	5106707
YP_001185540.1	CDS	Pmen_0033	NC_009439.1	31594	32523	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator	complement(31594..32523)	Pseudomonas mendocina ymp	5106708
YP_001185541.1	CDS	Pmen_0034	NC_009439.1	32882	33268	R	hypothetical protein	complement(32882..33268)	Pseudomonas mendocina ymp	5106709
YP_001185542.1	CDS	Pmen_0036	NC_009439.1	33458	35032	R	PFAM: transposase IS66; transposase IS66	complement(33458..35032)	Pseudomonas mendocina ymp	5106934
YP_001185543.1	CDS	Pmen_0037	NC_009439.1	35052	35411	R	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	complement(35052..35411)	Pseudomonas mendocina ymp	5106711
YP_001185544.1	CDS	Pmen_0038	NC_009439.1	36171	37328	D	TIGRFAM: type III secretion effector delivery regulator, TyeA family; type III secretion regulator YopN/LcrE/InvE/MxiC; TyeA family type III secretion effector delivery regulator	36171..37328	Pseudomonas mendocina ymp	5106712
YP_001185545.1	CDS	Pmen_0039	NC_009439.1	37328	39412	D	TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein; HrcV family type III secretion protein	37328..39412	Pseudomonas mendocina ymp	5106713
YP_001185546.1	CDS	Pmen_0040	NC_009439.1	39429	40343	D	TIGRFAM: type III secretion apparatus protein, YscD/HrpQ family; YscD/HrpQ family type III secretion apparatus protein	39429..40343	Pseudomonas mendocina ymp	5106714
YP_001185547.1	CDS	Pmen_0041	NC_009439.1	40340	41698	D	TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase; FliI/YscN family ATPase	40340..41698	Pseudomonas mendocina ymp	5106715
YP_001185548.1	CDS	Pmen_0042	NC_009439.1	41701	42147	D	hypothetical protein	41701..42147	Pseudomonas mendocina ymp	5106716
YP_001185549.1	CDS	Pmen_0043	NC_009439.1	42137	42673	D	hypothetical protein	42137..42673	Pseudomonas mendocina ymp	5106717
YP_001185550.1	CDS	Pmen_0044	NC_009439.1	42670	43386	D	hypothetical protein	42670..43386	Pseudomonas mendocina ymp	5106718
YP_001185551.1	CDS	Pmen_0045	NC_009439.1	43376	43777	D	PFAM: surface presentation of antigens (SPOA) protein; surface presentation of antigens (SPOA) protein	43376..43777	Pseudomonas mendocina ymp	5106719
YP_001185552.1	CDS	Pmen_0046	NC_009439.1	43774	44427	D	part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein	43774..44427	Pseudomonas mendocina ymp	5106720
YP_001185553.1	CDS	Pmen_0047	NC_009439.1	44435	44698	D	TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ, family 3; HrpO family type III secretion protein	44435..44698	Pseudomonas mendocina ymp	5106721
YP_001185554.1	CDS	Pmen_0048	NC_009439.1	44699	45499	D	TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; type III secretion protein SpaR/YscT/HrcT	44699..45499	Pseudomonas mendocina ymp	5106722
YP_001185555.1	CDS	Pmen_0049	NC_009439.1	45496	46575	D	TIGRFAM: type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter; YscU/HrpY family type III secretion protein	45496..46575	Pseudomonas mendocina ymp	5106723
YP_001185556.1	CDS	Pmen_0050	NC_009439.1	46762	47412	D	TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; hypothetical protein	46762..47412	Pseudomonas mendocina ymp	5106724
YP_001185557.1	CDS	Pmen_0051	NC_009439.1	47452	47766	R	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein	complement(47452..47766)	Pseudomonas mendocina ymp	5106725
YP_001185558.1	CDS	trkA	NC_009439.1	47855	49228	R	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein	complement(47855..49228)	Pseudomonas mendocina ymp	5106237
YP_001185559.1	CDS	Pmen_0053	NC_009439.1	49240	50553	R	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; sun protein	complement(49240..50553)	Pseudomonas mendocina ymp	5106238
YP_001185560.1	CDS	fmt	NC_009439.1	50550	51494	R	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase	complement(50550..51494)	Pseudomonas mendocina ymp	5106239
YP_001185561.1	CDS	def	NC_009439.1	51547	52053	R	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase	complement(51547..52053)	Pseudomonas mendocina ymp	5106240
YP_001185562.1	CDS	Pmen_0056	NC_009439.1	52207	53244	D	PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM	52207..53244	Pseudomonas mendocina ymp	5106241
YP_001185563.1	CDS	Pmen_0057	NC_009439.1	53331	54437	D	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA	53331..54437	Pseudomonas mendocina ymp	5106242
YP_001185564.1	CDS	Pmen_0058	NC_009439.1	54504	55061	D	PFAM: SUA5/yciO/yrdC, N-terminal domain; SUA5/yciO/yrdC domain-containing protein	54504..55061	Pseudomonas mendocina ymp	5106243
YP_001185565.1	CDS	Pmen_0059	NC_009439.1	55173	56150	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	complement(55173..56150)	Pseudomonas mendocina ymp	5106244
YP_001185566.1	CDS	Pmen_0060	NC_009439.1	56295	57209	D	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase	56295..57209	Pseudomonas mendocina ymp	5106245
YP_001185567.1	CDS	aroE	NC_009439.1	57317	58138	D	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase	57317..58138	Pseudomonas mendocina ymp	5106246
YP_001185568.1	CDS	Pmen_0062	NC_009439.1	58342	59982	R	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; sulfate transporter	complement(58342..59982)	Pseudomonas mendocina ymp	5106247
YP_001185569.1	CDS	Pmen_0063	NC_009439.1	60029	60949	R	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein	complement(60029..60949)	Pseudomonas mendocina ymp	5106248
YP_001185570.1	CDS	Pmen_0064	NC_009439.1	60993	62501	R	PFAM: sulfatase; sulfatase	complement(60993..62501)	Pseudomonas mendocina ymp	5106249
YP_001185571.1	CDS	Pmen_0065	NC_009439.1	62616	63569	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	62616..63569	Pseudomonas mendocina ymp	5106250
YP_001185572.1	CDS	pbpG	NC_009439.1	63685	64587	D	specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase	63685..64587	Pseudomonas mendocina ymp	5106251
YP_001185573.1	CDS	Pmen_0067	NC_009439.1	64684	65592	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(64684..65592)	Pseudomonas mendocina ymp	5106252
YP_001185574.1	CDS	Pmen_0068	NC_009439.1	65802	66605	D	PFAM: aldo/keto reductase; aldo/keto reductase	65802..66605	Pseudomonas mendocina ymp	5106253
YP_001185575.1	CDS	Pmen_0069	NC_009439.1	66677	67420	R	PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	complement(66677..67420)	Pseudomonas mendocina ymp	5106254
YP_001185576.1	CDS	trpA	NC_009439.1	67576	68385	R	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha	complement(67576..68385)	Pseudomonas mendocina ymp	5106255
YP_001185577.1	CDS	Pmen_0071	NC_009439.1	68382	69617	R	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta	complement(68382..69617)	Pseudomonas mendocina ymp	5106256
YP_001185578.1	CDS	Pmen_0072	NC_009439.1	69732	70400	D	hypothetical protein	69732..70400	Pseudomonas mendocina ymp	5106257
YP_001185579.1	CDS	Pmen_0073	NC_009439.1	70405	71316	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	70405..71316	Pseudomonas mendocina ymp	5106258
YP_001185580.1	CDS	Pmen_0074	NC_009439.1	71370	71609	D	hypothetical protein	71370..71609	Pseudomonas mendocina ymp	5106259
YP_001185581.1	CDS	Pmen_0075	NC_009439.1	71708	71923	D	PFAM: protein of unknown function DUF1458; hypothetical protein	71708..71923	Pseudomonas mendocina ymp	5106260
YP_001185582.1	CDS	Pmen_0076	NC_009439.1	71892	72869	R	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase	complement(71892..72869)	Pseudomonas mendocina ymp	5106261
YP_001185583.1	CDS	Pmen_0077	NC_009439.1	73153	73734	D	hypothetical protein	73153..73734	Pseudomonas mendocina ymp	5106262
YP_001185584.1	CDS	Pmen_0078	NC_009439.1	73972	75201	R	PFAM: nucleoside recognition domain protein; nucleoside recognition domain-containing protein	complement(73972..75201)	Pseudomonas mendocina ymp	5106263
YP_001185585.1	CDS	Pmen_0079	NC_009439.1	75366	75827	R	hypothetical protein	complement(75366..75827)	Pseudomonas mendocina ymp	5106264
YP_001185586.1	CDS	Pmen_0080	NC_009439.1	75838	76002	R	PFAM: protein of unknown function DUF1328; hypothetical protein	complement(75838..76002)	Pseudomonas mendocina ymp	5106265
YP_001185587.1	CDS	Pmen_0081	NC_009439.1	76022	76294	R	hypothetical protein	complement(76022..76294)	Pseudomonas mendocina ymp	5106266
YP_001185588.1	CDS	Pmen_0082	NC_009439.1	76571	76972	D	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	76571..76972	Pseudomonas mendocina ymp	5106267
YP_001185589.1	CDS	Pmen_0083	NC_009439.1	77048	77680	R	PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator	complement(77048..77680)	Pseudomonas mendocina ymp	5106268
YP_001185590.1	CDS	Pmen_0084	NC_009439.1	77721	79070	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; Cache, type 2 domain protein; integral membrane sensor signal transduction histidine kinase	complement(77721..79070)	Pseudomonas mendocina ymp	5106269
YP_001185591.1	CDS	Pmen_0085	NC_009439.1	79640	80740	R	PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	complement(79640..80740)	Pseudomonas mendocina ymp	5106270
YP_001185592.1	CDS	Pmen_0086	NC_009439.1	80925	81467	D	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ	80925..81467	Pseudomonas mendocina ymp	5106271
YP_001185593.1	CDS	Pmen_0087	NC_009439.1	81460	82836	D	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM	81460..82836	Pseudomonas mendocina ymp	5106272
YP_001185594.1	CDS	Pmen_0088	NC_009439.1	82941	83843	D	PFAM: Aldose 1-epimerase; aldose 1-epimerase	82941..83843	Pseudomonas mendocina ymp	5106273
YP_001185595.1	CDS	Pmen_0089	NC_009439.1	84279	85841	D	PFAM: ImpA domain protein; ImpA domain-containing protein	84279..85841	Pseudomonas mendocina ymp	5106274
YP_001185596.1	CDS	Pmen_0090	NC_009439.1	85896	86402	D	PFAM: uncharacterised conserved protein UCP028301; hypothetical protein	85896..86402	Pseudomonas mendocina ymp	5106275
YP_001185597.1	CDS	Pmen_0091	NC_009439.1	86428	87906	D	PFAM: protein of unknown function DUF877; hypothetical protein	86428..87906	Pseudomonas mendocina ymp	5106276
YP_001185598.1	CDS	Pmen_0092	NC_009439.1	87913	88341	D	PFAM: GPW/gp25 family protein; GPW/gp25 family protein	87913..88341	Pseudomonas mendocina ymp	5106277
YP_001185599.1	CDS	Pmen_0093	NC_009439.1	88331	89776	D	hypothetical protein	88331..89776	Pseudomonas mendocina ymp	5106278
YP_001185600.1	CDS	Pmen_0094	NC_009439.1	89769	90155	D	hypothetical protein	89769..90155	Pseudomonas mendocina ymp	5106279
YP_001185601.1	CDS	Pmen_0095	NC_009439.1	90186	91976	D	PFAM: protein of unknown function DUF879; hypothetical protein	90186..91976	Pseudomonas mendocina ymp	5106280
YP_001185602.1	CDS	Pmen_0096	NC_009439.1	91940	92947	D	PFAM: protein of unknown function DUF1305; hypothetical protein	91940..92947	Pseudomonas mendocina ymp	5106281
YP_001185603.1	CDS	Pmen_0097	NC_009439.1	92959	95559	D	PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase	92959..95559	Pseudomonas mendocina ymp	5106282
YP_001185604.1	CDS	Pmen_0098	NC_009439.1	95546	97078	D	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; Fis family transcriptional regulator	95546..97078	Pseudomonas mendocina ymp	5106283
YP_001185605.1	CDS	Pmen_0099	NC_009439.1	97126	97260	D	hypothetical protein	97126..97260	Pseudomonas mendocina ymp	5106284
YP_001185606.1	CDS	Pmen_0100	NC_009439.1	97281	98477	D	PFAM: Forkhead-associated protein; FHA domain-containing protein	97281..98477	Pseudomonas mendocina ymp	5106285
YP_001185607.1	CDS	Pmen_0101	NC_009439.1	98483	98965	D	hypothetical protein	98483..98965	Pseudomonas mendocina ymp	5106286
YP_001185608.1	CDS	Pmen_0102	NC_009439.1	98962	100293	D	PFAM: protein of unknown function DUF876; hypothetical protein	98962..100293	Pseudomonas mendocina ymp	5106287
YP_001185609.1	CDS	Pmen_0103	NC_009439.1	100296	101177	D	hypothetical protein	100296..101177	Pseudomonas mendocina ymp	5106288
YP_001185610.1	CDS	Pmen_0104	NC_009439.1	101174	104713	D	PFAM: ImcF domain protein; protein of unknown function DUF1215; ImcF domain-containing protein	101174..104713	Pseudomonas mendocina ymp	5106289
YP_001185611.1	CDS	Pmen_0105	NC_009439.1	104713	105441	D	PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; protein phosphatase 2C domain-containing protein	104713..105441	Pseudomonas mendocina ymp	5106290
YP_001185612.1	CDS	Pmen_0106	NC_009439.1	105438	106409	D	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase	105438..106409	Pseudomonas mendocina ymp	5106291
YP_001185613.1	CDS	Pmen_0107	NC_009439.1	106434	108515	D	PFAM: Rhs element Vgr protein; Rhs element Vgr protein	106434..108515	Pseudomonas mendocina ymp	5106292
YP_001185614.1	CDS	Pmen_0108	NC_009439.1	108566	111730	D	PFAM: glycoside hydrolase, family 19; glycoside hydrolase	108566..111730	Pseudomonas mendocina ymp	5106293
YP_001185615.1	CDS	Pmen_0109	NC_009439.1	111727	112542	D	hypothetical protein	111727..112542	Pseudomonas mendocina ymp	5106294
YP_001185616.1	CDS	Pmen_0110	NC_009439.1	112621	113043	D	hypothetical protein	112621..113043	Pseudomonas mendocina ymp	5106295
YP_001185617.1	CDS	Pmen_0111	NC_009439.1	113171	113710	D	hypothetical protein	113171..113710	Pseudomonas mendocina ymp	5106296
YP_001185618.1	CDS	Pmen_0112	NC_009439.1	113794	114204	D	PFAM: protein of unknown function DUF1311; hypothetical protein	113794..114204	Pseudomonas mendocina ymp	5106297
YP_001185619.1	CDS	Pmen_0113	NC_009439.1	114401	115450	D	hypothetical protein	114401..115450	Pseudomonas mendocina ymp	5106298
YP_001185620.1	CDS	Pmen_0114	NC_009439.1	115461	115928	R	hypothetical protein	complement(115461..115928)	Pseudomonas mendocina ymp	5106299
YP_001185621.1	CDS	Pmen_0115	NC_009439.1	115947	116483	R	hypothetical protein	complement(115947..116483)	Pseudomonas mendocina ymp	5106300
YP_001185622.1	CDS	Pmen_0116	NC_009439.1	116572	116817	R	PFAM: Transglycosylase-associated protein; transglycosylase-associated protein	complement(116572..116817)	Pseudomonas mendocina ymp	5106301
YP_001185623.1	CDS	Pmen_0117	NC_009439.1	116883	117647	R	amino acid ABC transporter periplasmic protein	complement(116883..117647)	Pseudomonas mendocina ymp	5106302
YP_001185624.1	CDS	Pmen_0118	NC_009439.1	117703	118788	R	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit	complement(117703..118788)	Pseudomonas mendocina ymp	5106303
YP_001185625.1	CDS	Pmen_0119	NC_009439.1	118788	119279	R	TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit	complement(118788..119279)	Pseudomonas mendocina ymp	5106304
YP_001185626.1	CDS	Pmen_0120	NC_009439.1	119556	120578	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	119556..120578	Pseudomonas mendocina ymp	5106305
YP_001185627.1	CDS	Pmen_0121	NC_009439.1	120683	121477	D	hypothetical protein	120683..121477	Pseudomonas mendocina ymp	5106306
YP_001185628.1	CDS	Pmen_0122	NC_009439.1	121557	122549	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	121557..122549	Pseudomonas mendocina ymp	5106307
YP_001185629.1	CDS	Pmen_0123	NC_009439.1	123150	124178	D	PFAM: histone deacetylase superfamily; histone deacetylase superfamily protein	123150..124178	Pseudomonas mendocina ymp	5106308
YP_001185630.1	CDS	Pmen_0124	NC_009439.1	124242	125336	D	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	124242..125336	Pseudomonas mendocina ymp	5106309
YP_001185631.1	CDS	Pmen_0125	NC_009439.1	125368	126345	R	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; transcriptional regulator	complement(125368..126345)	Pseudomonas mendocina ymp	5106310
YP_001185632.1	CDS	Pmen_0126	NC_009439.1	126485	127327	D	dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein	126485..127327	Pseudomonas mendocina ymp	5106311
YP_001185633.1	CDS	Pmen_0127	NC_009439.1	127469	128371	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(127469..128371)	Pseudomonas mendocina ymp	5106312
YP_001185634.1	CDS	aspA	NC_009439.1	128663	130087	D	catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase	128663..130087	Pseudomonas mendocina ymp	5106808
YP_001185635.1	CDS	Pmen_0129	NC_009439.1	130216	131469	D	PFAM: sodium:dicarboxylate symporter; sodium:dicarboxylate symporter	130216..131469	Pseudomonas mendocina ymp	5106809
YP_001185636.1	CDS	Pmen_0130	NC_009439.1	131600	133072	R	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator	complement(131600..133072)	Pseudomonas mendocina ymp	5106810
YP_001185637.1	CDS	Pmen_0131	NC_009439.1	133170	133802	D	PFAM: Negative transcriptional regulator; FMN-binding negative transcriptional regulator	133170..133802	Pseudomonas mendocina ymp	5106811
YP_001185638.1	CDS	Pmen_0132	NC_009439.1	133822	134262	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	133822..134262	Pseudomonas mendocina ymp	5106812
YP_001185639.1	CDS	Pmen_0133	NC_009439.1	134262	134933	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	134262..134933	Pseudomonas mendocina ymp	5106813
YP_001185640.1	CDS	Pmen_0134	NC_009439.1	134938	135756	R	PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein	complement(134938..135756)	Pseudomonas mendocina ymp	5106814
YP_001185641.1	CDS	Pmen_0135	NC_009439.1	135917	137359	D	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein	135917..137359	Pseudomonas mendocina ymp	5106815
YP_001185642.1	CDS	Pmen_0136	NC_009439.1	137521	138510	D	PFAM: Asparaginase/glutaminase; asparaginase	137521..138510	Pseudomonas mendocina ymp	5106816
YP_001185643.1	CDS	Pmen_0137	NC_009439.1	138539	138982	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	138539..138982	Pseudomonas mendocina ymp	5106817
YP_001185644.1	CDS	Pmen_0138	NC_009439.1	138990	139385	R	PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP	complement(138990..139385)	Pseudomonas mendocina ymp	5106818
YP_001185645.1	CDS	Pmen_0139	NC_009439.1	139457	140365	R	catalyzes the formation of glutamate from glutamine; glutaminase	complement(139457..140365)	Pseudomonas mendocina ymp	5106819
YP_001185646.1	CDS	Pmen_0140	NC_009439.1	140508	141437	D	PFAM: Auxin Efflux Carrier; auxin efflux carrier	140508..141437	Pseudomonas mendocina ymp	5106820
YP_001185647.1	CDS	Pmen_0141	NC_009439.1	141427	142068	R	hypothetical protein	complement(141427..142068)	Pseudomonas mendocina ymp	5106821
YP_001185648.1	CDS	Pmen_0142	NC_009439.1	142477	143601	D	PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region; cytochrome c oxidase subunit II	142477..143601	Pseudomonas mendocina ymp	5106822
YP_001185649.1	CDS	Pmen_0143	NC_009439.1	143606	145189	D	PFAM: cytochrome c oxidase, subunit I; cytochrome-c oxidase	143606..145189	Pseudomonas mendocina ymp	5106823
YP_001185650.1	CDS	Pmen_0144	NC_009439.1	145200	145748	D	involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein	145200..145748	Pseudomonas mendocina ymp	5106824
YP_001185651.1	CDS	Pmen_0145	NC_009439.1	145760	146656	D	PFAM: cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III	145760..146656	Pseudomonas mendocina ymp	5106825
YP_001185652.1	CDS	Pmen_0146	NC_009439.1	146665	146868	R	hypothetical protein	complement(146665..146868)	Pseudomonas mendocina ymp	5106826
YP_001185653.1	CDS	Pmen_0147	NC_009439.1	146940	147671	D	hypothetical protein	146940..147671	Pseudomonas mendocina ymp	5106827
YP_001185654.1	CDS	Pmen_0148	NC_009439.1	147646	148227	D	hypothetical protein	147646..148227	Pseudomonas mendocina ymp	5106828
YP_001185655.1	CDS	Pmen_0149	NC_009439.1	148264	149301	D	PFAM: cytochrome oxidase assembly; cytochrome oxidase assembly	148264..149301	Pseudomonas mendocina ymp	5106829
YP_001185656.1	CDS	Pmen_0150	NC_009439.1	149320	150219	D	converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase	149320..150219	Pseudomonas mendocina ymp	5106830
YP_001185657.1	CDS	Pmen_0151	NC_009439.1	150372	151004	D	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; electron transport protein SCO1/SenC	150372..151004	Pseudomonas mendocina ymp	5106831
YP_001185658.1	CDS	Pmen_0152	NC_009439.1	151066	152016	R	catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase	complement(151066..152016)	Pseudomonas mendocina ymp	5106832
YP_001185659.1	CDS	Pmen_0153	NC_009439.1	152032	152316	R	hypothetical protein	complement(152032..152316)	Pseudomonas mendocina ymp	5106833
YP_001185660.1	CDS	Pmen_0154	NC_009439.1	152534	155329	D	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I	152534..155329	Pseudomonas mendocina ymp	5106834
YP_001185661.1	CDS	engB	NC_009439.1	155776	156426	R	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC	complement(155776..156426)	Pseudomonas mendocina ymp	5106835
YP_001185662.1	CDS	Pmen_0156	NC_009439.1	156671	156961	D	cytochrome c5-like protein	156671..156961	Pseudomonas mendocina ymp	5106836
YP_001185663.1	CDS	Pmen_0157	NC_009439.1	157010	157615	D	PFAM: cytochrome c, class I; cytochrome c, class I	157010..157615	Pseudomonas mendocina ymp	5106837
YP_001185664.1	CDS	Pmen_0158	NC_009439.1	157755	158405	D	PFAM: DSBA oxidoreductase; DSBA oxidoreductase	157755..158405	Pseudomonas mendocina ymp	5106838
YP_001185665.1	CDS	Pmen_0159	NC_009439.1	158425	159297	D	PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase	158425..159297	Pseudomonas mendocina ymp	5106839
YP_001185666.1	CDS	Pmen_0160	NC_009439.1	159403	160971	R	PFAM: transposase IS66; transposase IS66	complement(159403..160971)	Pseudomonas mendocina ymp	5106840
YP_001185667.1	CDS	Pmen_0161	NC_009439.1	160991	161350	R	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	complement(160991..161350)	Pseudomonas mendocina ymp	5106841
YP_001185668.1	CDS	Pmen_0162	NC_009439.1	161388	163232	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	161388..163232	Pseudomonas mendocina ymp	5106842
YP_001185669.1	CDS	Pmen_0163	NC_009439.1	163250	164761	R	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; uracil-xanthine permease	complement(163250..164761)	Pseudomonas mendocina ymp	5106843
YP_001185670.1	CDS	Pmen_0164	NC_009439.1	164992	165582	D	PFAM: multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein	164992..165582	Pseudomonas mendocina ymp	5106844
YP_001185671.1	CDS	Pmen_0165	NC_009439.1	165579	166361	D	PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase	165579..166361	Pseudomonas mendocina ymp	5106845
YP_001185672.1	CDS	Pmen_0166	NC_009439.1	166365	166769	R	hypothetical protein	complement(166365..166769)	Pseudomonas mendocina ymp	5106846
YP_001185673.1	CDS	Pmen_0167	NC_009439.1	166883	167545	R	hypothetical protein	complement(166883..167545)	Pseudomonas mendocina ymp	5106847
YP_001185674.1	CDS	Pmen_0168	NC_009439.1	167580	167987	R	PFAM: response regulator receiver; response regulator receiver protein	complement(167580..167987)	Pseudomonas mendocina ymp	5106848
YP_001185675.1	CDS	Pmen_0169	NC_009439.1	168101	171607	D	PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; multi-sensor hybrid histidine kinase	168101..171607	Pseudomonas mendocina ymp	5106849
YP_001185676.1	CDS	Pmen_0170	NC_009439.1	171607	172416	D	PFAM: MCP methyltransferase, CheR-type; chemotaxis protein CheR	171607..172416	Pseudomonas mendocina ymp	5106850
YP_001185677.1	CDS	Pmen_0171	NC_009439.1	172413	173024	D	PFAM: CheB methylesterase; CheB methylesterase	172413..173024	Pseudomonas mendocina ymp	5106851
YP_001185678.1	CDS	Pmen_0172	NC_009439.1	173018	174205	D	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; response regulator receiver sensor signal transduction histidine kinase	173018..174205	Pseudomonas mendocina ymp	5106852
YP_001185679.1	CDS	Pmen_0173	NC_009439.1	174381	174668	D	hypothetical protein	174381..174668	Pseudomonas mendocina ymp	5106853
YP_001185680.1	CDS	Pmen_0174	NC_009439.1	174687	174872	D	hypothetical protein	174687..174872	Pseudomonas mendocina ymp	5106854
YP_001185681.1	CDS	Pmen_0175	NC_009439.1	174898	176694	R	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; alginate biosynthesis sensor protein KinB	complement(174898..176694)	Pseudomonas mendocina ymp	5106855
YP_001185682.1	CDS	Pmen_0176	NC_009439.1	176708	178060	R	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two-component response regulator AlgB	complement(176708..178060)	Pseudomonas mendocina ymp	5106856
YP_001185683.1	CDS	Pmen_0177	NC_009439.1	178271	179101	D	PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; transport-associated	178271..179101	Pseudomonas mendocina ymp	5106857
YP_001185684.1	CDS	Pmen_0178	NC_009439.1	179167	179601	D	hypothetical protein	179167..179601	Pseudomonas mendocina ymp	5106858
YP_001185685.1	CDS	Pmen_0179	NC_009439.1	180505	181473	D	TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate binding protein	180505..181473	Pseudomonas mendocina ymp	5106859
YP_001185686.1	CDS	Pmen_0180	NC_009439.1	181639	183924	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	181639..183924	Pseudomonas mendocina ymp	5106860
YP_001185687.1	CDS	Pmen_0181	NC_009439.1	183940	185616	D	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease	183940..185616	Pseudomonas mendocina ymp	5106861
YP_001185688.1	CDS	Pmen_0182	NC_009439.1	185683	186516	D	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein	185683..186516	Pseudomonas mendocina ymp	5106862
YP_001185689.1	CDS	Pmen_0183	NC_009439.1	186678	187406	D	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU	186678..187406	Pseudomonas mendocina ymp	5106863
YP_001185690.1	CDS	Pmen_0184	NC_009439.1	187542	188450	D	PFAM: response regulator receiver; response regulator receiver protein	187542..188450	Pseudomonas mendocina ymp	5106864
YP_001185691.1	CDS	Pmen_0185	NC_009439.1	188598	189494	D	PFAM: peptidase M23B; peptidase M23B	188598..189494	Pseudomonas mendocina ymp	5106865
YP_001185692.1	CDS	Pmen_0186	NC_009439.1	189850	191145	D	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated 2 domain-containing protein	189850..191145	Pseudomonas mendocina ymp	5106866
YP_001185693.1	CDS	Pmen_0187	NC_009439.1	191145	191543	D	PFAM: flagellar protein FliS; flagellar protein FliS	191145..191543	Pseudomonas mendocina ymp	5106867
YP_001185694.1	CDS	Pmen_0188	NC_009439.1	191527	191844	D	hypothetical protein	191527..191844	Pseudomonas mendocina ymp	5106868
YP_001185695.1	CDS	Pmen_0189	NC_009439.1	191848	192906	D	PFAM: flagellar hook-length control protein; flagellar hook-length control protein	191848..192906	Pseudomonas mendocina ymp	5106869
YP_001185696.1	CDS	Pmen_0190	NC_009439.1	192934	193410	D	hypothetical protein	192934..193410	Pseudomonas mendocina ymp	5106870
YP_001185697.1	CDS	Pmen_0191	NC_009439.1	193427	194161	D	TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; RNA polymerase sigma-28 subunit FliA/WhiG	193427..194161	Pseudomonas mendocina ymp	5106871
YP_001185698.1	CDS	Pmen_0192	NC_009439.1	194163	195035	D	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA	194163..195035	Pseudomonas mendocina ymp	5106872
YP_001185699.1	CDS	Pmen_0193	NC_009439.1	195032	195973	D	PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein	195032..195973	Pseudomonas mendocina ymp	5106873
YP_001185700.1	CDS	Pmen_0194	NC_009439.1	196058	196528	R	hypothetical protein	complement(196058..196528)	Pseudomonas mendocina ymp	5106874
YP_001185701.1	CDS	Pmen_0195	NC_009439.1	196525	197358	R	PFAM: transcriptional regulator domain protein; transcriptional regulator CadC	complement(196525..197358)	Pseudomonas mendocina ymp	5106875
YP_001185702.1	CDS	Pmen_0196	NC_009439.1	197677	198576	R	PFAM: flagellin domain protein; flagellin domain-containing protein	complement(197677..198576)	Pseudomonas mendocina ymp	5106876
YP_001185703.1	CDS	Pmen_0197	NC_009439.1	198855	199022	R	PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein	complement(198855..199022)	Pseudomonas mendocina ymp	5106877
YP_001185704.1	CDS	Pmen_0198	NC_009439.1	199140	200840	R	PFAM: L-lactate permease; L-lactate permease	complement(199140..200840)	Pseudomonas mendocina ymp	5106878
YP_001185705.1	CDS	Pmen_0199	NC_009439.1	201068	203245	R	catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G	complement(201068..203245)	Pseudomonas mendocina ymp	5106879
YP_001185706.1	CDS	Pmen_0200	NC_009439.1	203399	203839	R	PFAM: protein of unknown function DUF336; hypothetical protein	complement(203399..203839)	Pseudomonas mendocina ymp	5106880
YP_001185707.1	CDS	glcF	NC_009439.1	203876	205093	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; glycolate oxidase iron-sulfur subunit	complement(203876..205093)	Pseudomonas mendocina ymp	5106168
YP_001185708.1	CDS	glcE	NC_009439.1	205097	206152	R	PFAM: FAD linked oxidase domain protein; glycolate oxidase FAD binding subunit	complement(205097..206152)	Pseudomonas mendocina ymp	5106169
YP_001185709.1	CDS	Pmen_0203	NC_009439.1	206152	207651	R	TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein; glycolate oxidase subunit GlcD	complement(206152..207651)	Pseudomonas mendocina ymp	5106170
YP_001185710.1	CDS	Pmen_0204	NC_009439.1	207891	208664	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; DNA-binding transcriptional regulator GlcC	207891..208664	Pseudomonas mendocina ymp	5106171
YP_001185711.1	CDS	Pmen_0205	NC_009439.1	208742	209587	R	PFAM: SAF domain; SAF domain-containing protein	complement(208742..209587)	Pseudomonas mendocina ymp	5106172
YP_001185712.1	CDS	Pmen_0206	NC_009439.1	209639	209992	D	TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB	209639..209992	Pseudomonas mendocina ymp	5106173
YP_001185713.1	CDS	flgC	NC_009439.1	209995	210423	D	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar basal body rod protein FlgC	209995..210423	Pseudomonas mendocina ymp	5106174
YP_001185714.1	CDS	flgD	NC_009439.1	210423	211100	D	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Vibrio parahaemolyticus protein in this cluster is associated with lateral flagella production; flagellar basal body rod modification protein	210423..211100	Pseudomonas mendocina ymp	5106175
YP_001185715.1	CDS	Pmen_0209	NC_009439.1	211137	212324	D	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body FlaE domain-containing protein	211137..212324	Pseudomonas mendocina ymp	5106176
YP_001185716.1	CDS	Pmen_0210	NC_009439.1	212334	213065	D	TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgF	212334..213065	Pseudomonas mendocina ymp	5106177
YP_001185717.1	CDS	Pmen_0211	NC_009439.1	213261	214046	D	TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal-body rod protein FlgG	213261..214046	Pseudomonas mendocina ymp	5106178
YP_001185718.1	CDS	flgH	NC_009439.1	214052	214714	D	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; the Yersinia have 2 copies of flgH; flagellar basal body L-ring protein	214052..214714	Pseudomonas mendocina ymp	5106179
YP_001185719.1	CDS	flgI	NC_009439.1	214724	215818	D	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein	214724..215818	Pseudomonas mendocina ymp	5106180
YP_001185720.1	CDS	Pmen_0214	NC_009439.1	215822	216946	D	PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase	215822..216946	Pseudomonas mendocina ymp	5106181
YP_001185721.1	CDS	Pmen_0215	NC_009439.1	216950	218317	D	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar hook-associated protein FlgK	216950..218317	Pseudomonas mendocina ymp	5106182
YP_001185722.1	CDS	flgL	NC_009439.1	218341	219258	D	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; in Vibrio parahaemolyticus the protein in this cluster is associated with the lateral flagella; flagellar hook-associated protein FlgL	218341..219258	Pseudomonas mendocina ymp	5106183
YP_001185723.1	CDS	Pmen_0217	NC_009439.1	219271	220296	D	hypothetical protein	219271..220296	Pseudomonas mendocina ymp	5106184
YP_001185724.1	CDS	Pmen_0218	NC_009439.1	220390	221370	R	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	complement(220390..221370)	Pseudomonas mendocina ymp	5106185
YP_001185725.1	CDS	Pmen_0219	NC_009439.1	221603	222754	R	hypothetical protein	complement(221603..222754)	Pseudomonas mendocina ymp	5106186
YP_001185726.1	CDS	Pmen_0220	NC_009439.1	222897	224366	R	poly-gamma-glutamate biosynthesis protein	complement(222897..224366)	Pseudomonas mendocina ymp	5106187
YP_001185727.1	CDS	Pmen_0221	NC_009439.1	224384	225679	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(224384..225679)	Pseudomonas mendocina ymp	5106188
YP_001185728.1	CDS	Pmen_0222	NC_009439.1	225807	226730	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(225807..226730)	Pseudomonas mendocina ymp	5106189
YP_001185729.1	CDS	Pmen_0223	NC_009439.1	226866	228227	R	PFAM: protein of unknown function DUF1329; hypothetical protein	complement(226866..228227)	Pseudomonas mendocina ymp	5106190
YP_001185730.1	CDS	Pmen_0224	NC_009439.1	228248	230059	R	PFAM: protein of unknown function DUF1302; hypothetical protein	complement(228248..230059)	Pseudomonas mendocina ymp	5106191
YP_001185731.1	CDS	Pmen_0225	NC_009439.1	230370	231347	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase	230370..231347	Pseudomonas mendocina ymp	5106192
YP_001185732.1	CDS	Pmen_0226	NC_009439.1	231453	232058	D	PFAM: Glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein	231453..232058	Pseudomonas mendocina ymp	5106193
YP_001185733.1	CDS	Pmen_0227	NC_009439.1	232306	233889	D	PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase	232306..233889	Pseudomonas mendocina ymp	5106194
YP_001185734.1	CDS	Pmen_0228	NC_009439.1	233959	234732	R	hypothetical protein	complement(233959..234732)	Pseudomonas mendocina ymp	5106195
YP_001185735.1	CDS	Pmen_0229	NC_009439.1	234834	236258	D	PFAM: regulatory protein, LuxR; putative metal dependent phosphohydrolase	234834..236258	Pseudomonas mendocina ymp	5106196
YP_001185736.1	CDS	Pmen_0230	NC_009439.1	236346	236660	D	hypothetical protein	236346..236660	Pseudomonas mendocina ymp	5106197
YP_001185737.1	CDS	gabD	NC_009439.1	237746	239197	D	catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; succinate-semialdehyde dehydrogenase I	237746..239197	Pseudomonas mendocina ymp	5106935
YP_001185738.1	CDS	Pmen_0232	NC_009439.1	239295	240617	D	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase	239295..240617	Pseudomonas mendocina ymp	5106199
YP_001185739.1	CDS	Pmen_0233	NC_009439.1	240881	242566	D	hypothetical protein	240881..242566	Pseudomonas mendocina ymp	5106200
YP_001185740.1	CDS	Pmen_0234	NC_009439.1	242659	243186	D	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	242659..243186	Pseudomonas mendocina ymp	5106201
YP_001185741.1	CDS	Pmen_0235	NC_009439.1	243183	244319	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	243183..244319	Pseudomonas mendocina ymp	5106202
YP_001185742.1	CDS	Pmen_0236	NC_009439.1	244394	244753	R	PFAM: protein of unknown function DUF861, cupin_3; hypothetical protein	complement(244394..244753)	Pseudomonas mendocina ymp	5106203
YP_001185743.1	CDS	Pmen_0237	NC_009439.1	245006	246499	D	PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase	245006..246499	Pseudomonas mendocina ymp	5106204
YP_001185744.1	CDS	Pmen_0238	NC_009439.1	246805	247953	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	246805..247953	Pseudomonas mendocina ymp	5106205
YP_001185745.1	CDS	Pmen_0239	NC_009439.1	248041	248994	D	PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein	248041..248994	Pseudomonas mendocina ymp	5106206
YP_001185746.1	CDS	Pmen_0240	NC_009439.1	248995	250416	R	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator	complement(248995..250416)	Pseudomonas mendocina ymp	5106207
YP_001185747.1	CDS	Pmen_0241	NC_009439.1	250578	250796	D	PFAM: protein of unknown function DUF1127; hypothetical protein	250578..250796	Pseudomonas mendocina ymp	5106208
YP_001185748.1	CDS	Pmen_0242	NC_009439.1	250803	252116	R	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	complement(250803..252116)	Pseudomonas mendocina ymp	5106209
YP_001185749.1	CDS	Pmen_0243	NC_009439.1	252353	252706	D	PFAM: protein of unknown function UPF0153; hypothetical protein	252353..252706	Pseudomonas mendocina ymp	5106210
YP_001185750.1	CDS	Pmen_0244	NC_009439.1	252765	253253	R	PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator	complement(252765..253253)	Pseudomonas mendocina ymp	5106211
YP_001185751.1	CDS	Pmen_0245	NC_009439.1	253411	254709	D	catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit	253411..254709	Pseudomonas mendocina ymp	5106212
YP_001185752.1	CDS	Pmen_0246	NC_009439.1	254747	255097	D	PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP	254747..255097	Pseudomonas mendocina ymp	5106213
YP_001185753.1	CDS	dadX	NC_009439.1	255241	256329	D	catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA; alanine racemase	255241..256329	Pseudomonas mendocina ymp	5106214
YP_001185754.1	CDS	Pmen_0248	NC_009439.1	256433	256981	D	PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; XRE family transcriptional regulator	256433..256981	Pseudomonas mendocina ymp	5106215
YP_001185755.1	CDS	Pmen_0249	NC_009439.1	257104	257514	D	cytochrome c5-like protein	257104..257514	Pseudomonas mendocina ymp	5106216
YP_001185756.1	CDS	Pmen_0250	NC_009439.1	257927	260062	D	Acetyl-CoA hydrolase-like protein	257927..260062	Pseudomonas mendocina ymp	5106217
YP_001185757.1	CDS	Pmen_0251	NC_009439.1	260123	260695	R	Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase	complement(260123..260695)	Pseudomonas mendocina ymp	5106218
YP_001185758.1	CDS	Pmen_0252	NC_009439.1	260830	261312	R	hypothetical protein	complement(260830..261312)	Pseudomonas mendocina ymp	5106219
YP_001185759.1	CDS	Pmen_0253	NC_009439.1	261491	263500	R	TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; ATP-dependent DNA helicase Rep	complement(261491..263500)	Pseudomonas mendocina ymp	5106220
YP_001185760.1	CDS	Pmen_0254	NC_009439.1	263771	265444	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase	263771..265444	Pseudomonas mendocina ymp	5106221
YP_001185761.1	CDS	Pmen_0255	NC_009439.1	265479	266864	R	functions as a Na(+)/drug antiporter; multidrug efflux protein NorA	complement(265479..266864)	Pseudomonas mendocina ymp	5106222
YP_001185762.1	CDS	Pmen_0256	NC_009439.1	266995	267921	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	266995..267921	Pseudomonas mendocina ymp	5106223
YP_001185763.1	CDS	Pmen_0257	NC_009439.1	268018	269511	R	TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI	complement(268018..269511)	Pseudomonas mendocina ymp	5106224
YP_001185764.1	CDS	Pmen_0258	NC_009439.1	269546	269893	R	PFAM: protein of unknown function DUF526; hypothetical protein	complement(269546..269893)	Pseudomonas mendocina ymp	5106225
YP_001185765.1	CDS	Pmen_0259	NC_009439.1	270217	270555	D	PFAM: nitrogen regulatory protein P-II; nitrogen regulatory protein P-II	270217..270555	Pseudomonas mendocina ymp	5106226
YP_001185766.1	CDS	Pmen_0260	NC_009439.1	270885	272135	D	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; ammonium transporter	270885..272135	Pseudomonas mendocina ymp	5106227
YP_001185767.1	CDS	Pmen_0261	NC_009439.1	272234	272659	D	PFAM: protein of unknown function UPF0047; hypothetical protein	272234..272659	Pseudomonas mendocina ymp	5106228
YP_001185768.1	CDS	Pmen_0262	NC_009439.1	272737	273060	D	hypothetical protein	272737..273060	Pseudomonas mendocina ymp	5106229
YP_001185769.1	CDS	Pmen_0263	NC_009439.1	273185	273886	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase	complement(273185..273886)	Pseudomonas mendocina ymp	5106230
YP_001185770.1	CDS	xerC	NC_009439.1	273883	274830	R	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC	complement(273883..274830)	Pseudomonas mendocina ymp	5106231
YP_001185771.1	CDS	Pmen_0265	NC_009439.1	274845	275543	R	PFAM: protein of unknown function DUF484; hypothetical protein	complement(274845..275543)	Pseudomonas mendocina ymp	5106232
YP_001185772.1	CDS	dapF	NC_009439.1	275540	276370	R	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase	complement(275540..276370)	Pseudomonas mendocina ymp	5106233
YP_001185773.1	CDS	Pmen_0267	NC_009439.1	276381	277628	R	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase	complement(276381..277628)	Pseudomonas mendocina ymp	5106234
YP_001185774.1	CDS	Pmen_0268	NC_009439.1	277945	278982	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	277945..278982	Pseudomonas mendocina ymp	5106235
YP_001185775.1	CDS	cyaY	NC_009439.1	279052	279384	D	defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein	279052..279384	Pseudomonas mendocina ymp	5106236
YP_001185776.1	CDS	Pmen_0270	NC_009439.1	279374	279571	D	PFAM: protein of unknown function DUF1289; hypothetical protein	279374..279571	Pseudomonas mendocina ymp	5110240
YP_001185777.1	CDS	Pmen_0271	NC_009439.1	279689	280096	D	Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator	279689..280096	Pseudomonas mendocina ymp	5110241
YP_001185778.1	CDS	Pmen_0272	NC_009439.1	280155	280955	D	PFAM: lipase, class 3; lipase, class 3	280155..280955	Pseudomonas mendocina ymp	5110242
YP_001185779.1	CDS	cyaA	NC_009439.1	280970	283828	R	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase	complement(280970..283828)	Pseudomonas mendocina ymp	5110243
YP_001185780.1	CDS	Pmen_0274	NC_009439.1	283949	284203	R	hypothetical protein	complement(283949..284203)	Pseudomonas mendocina ymp	5110244
YP_001185781.1	CDS	Pmen_0275	NC_009439.1	284278	284607	R	hypothetical protein	complement(284278..284607)	Pseudomonas mendocina ymp	5110245
YP_001185782.1	CDS	Pmen_0276	NC_009439.1	284588	285046	R	hypothetical protein	complement(284588..285046)	Pseudomonas mendocina ymp	5110246
YP_001185783.1	CDS	Pmen_0277	NC_009439.1	285099	286493	R	catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase	complement(285099..286493)	Pseudomonas mendocina ymp	5110247
YP_001185784.1	CDS	Pmen_0278	NC_009439.1	286726	287808	D	PFAM: histidine kinase internal region; sensory transduction protein kinase AlgZ	286726..287808	Pseudomonas mendocina ymp	5110248
YP_001185785.1	CDS	Pmen_0279	NC_009439.1	287805	288551	D	PFAM: response regulator receiver; LytTr DNA-binding region; two-component response regulator AlgR	287805..288551	Pseudomonas mendocina ymp	5110249
YP_001185786.1	CDS	hemC	NC_009439.1	288636	289574	D	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase	288636..289574	Pseudomonas mendocina ymp	5110250
YP_001185787.1	CDS	Pmen_0281	NC_009439.1	289571	290344	D	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; uroporphyrinogen-III synthase	289571..290344	Pseudomonas mendocina ymp	5110251
YP_001185788.1	CDS	Pmen_0282	NC_009439.1	290357	291487	D	PFAM: protein of unknown function DUF513, hemX; hypothetical protein	290357..291487	Pseudomonas mendocina ymp	5110252
YP_001185789.1	CDS	Pmen_0283	NC_009439.1	291484	292731	D	PFAM: HemY domain protein; HemY domain-containing protein	291484..292731	Pseudomonas mendocina ymp	5110253
YP_001185790.1	CDS	Pmen_0284	NC_009439.1	292884	293375	D	PFAM: Disulphide bond formation protein DsbB; disulfide bond formation protein DsbB	292884..293375	Pseudomonas mendocina ymp	5110254
YP_001185791.1	CDS	Pmen_0285	NC_009439.1	293685	294158	D	binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor	293685..294158	Pseudomonas mendocina ymp	5110255
YP_001185792.1	CDS	Pmen_0286	NC_009439.1	294216	294863	R	PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase	complement(294216..294863)	Pseudomonas mendocina ymp	5110256
YP_001185793.1	CDS	Pmen_0287	NC_009439.1	295000	295953	D	putative CheA signal transduction histidine kinase	295000..295953	Pseudomonas mendocina ymp	5110257
YP_001185794.1	CDS	Pmen_0288	NC_009439.1	295950	296393	R	hypothetical protein	complement(295950..296393)	Pseudomonas mendocina ymp	5110258
YP_001185795.1	CDS	Pmen_0289	NC_009439.1	296432	298342	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	296432..298342	Pseudomonas mendocina ymp	5110259
YP_001185796.1	CDS	Pmen_0290	NC_009439.1	298342	298881	D	hypothetical protein	298342..298881	Pseudomonas mendocina ymp	5110260
YP_001185797.1	CDS	Pmen_0291	NC_009439.1	298916	299590	D	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	298916..299590	Pseudomonas mendocina ymp	5110261
YP_001185798.1	CDS	Pmen_0292	NC_009439.1	299719	301608	D	PFAM: cytochrome c, class I; iron permease FTR1; iron permease FTR1	299719..301608	Pseudomonas mendocina ymp	5110262
YP_001185799.1	CDS	Pmen_0293	NC_009439.1	301731	302066	D	hypothetical protein	301731..302066	Pseudomonas mendocina ymp	5110263
YP_001185800.1	CDS	Pmen_0294	NC_009439.1	302128	302577	D	PFAM: protein of unknown function DUF188; hypothetical protein	302128..302577	Pseudomonas mendocina ymp	5110264
YP_001185801.1	CDS	Pmen_0295	NC_009439.1	302689	303156	R	PFAM: thioesterase superfamily protein; hypothetical protein	complement(302689..303156)	Pseudomonas mendocina ymp	5110265
YP_001185802.1	CDS	Pmen_0296	NC_009439.1	303387	304046	R	PFAM: ThiJ/PfpI domain protein; isoprenoid biosynthesis protein	complement(303387..304046)	Pseudomonas mendocina ymp	5110266
YP_001185803.1	CDS	Pmen_0297	NC_009439.1	304209	305501	D	sterol desaturase-like protein	304209..305501	Pseudomonas mendocina ymp	5110267
YP_001185804.1	CDS	Pmen_0298	NC_009439.1	305469	306023	R	hypothetical protein	complement(305469..306023)	Pseudomonas mendocina ymp	5110268
YP_001185805.1	CDS	Pmen_0299	NC_009439.1	306217	307230	D	catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase	306217..307230	Pseudomonas mendocina ymp	5110269
YP_001185806.1	CDS	Pmen_0300	NC_009439.1	307250	309433	D	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase	307250..309433	Pseudomonas mendocina ymp	5110270
YP_001185807.1	CDS	Pmen_0301	NC_009439.1	309603	311105	R	PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase	complement(309603..311105)	Pseudomonas mendocina ymp	5110271
YP_001185808.1	CDS	Pmen_0302	NC_009439.1	311192	311713	R	PFAM: Ureidoglycolate hydrolase; ureidoglycolate hydrolase	complement(311192..311713)	Pseudomonas mendocina ymp	5110272
YP_001185809.1	CDS	Pmen_0303	NC_009439.1	311710	312441	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(311710..312441)	Pseudomonas mendocina ymp	5110273
YP_001185810.1	CDS	Pmen_0304	NC_009439.1	312428	313075	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	complement(312428..313075)	Pseudomonas mendocina ymp	5110274
YP_001185811.1	CDS	Pmen_0305	NC_009439.1	313075	313740	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	complement(313075..313740)	Pseudomonas mendocina ymp	5110275
YP_001185812.1	CDS	Pmen_0306	NC_009439.1	313760	314545	R	PFAM: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(313760..314545)	Pseudomonas mendocina ymp	5110276
YP_001185813.1	CDS	Pmen_0307	NC_009439.1	314833	315537	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; GntR family transcriptional regulator	314833..315537	Pseudomonas mendocina ymp	5110277
YP_001185814.1	CDS	Pmen_0308	NC_009439.1	315647	315973	D	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin	315647..315973	Pseudomonas mendocina ymp	5110278
YP_001185815.1	CDS	rho	NC_009439.1	316206	317465	D	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho	316206..317465	Pseudomonas mendocina ymp	5110279
YP_001185816.1	CDS	Pmen_0310	NC_009439.1	317715	319181	D	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase	317715..319181	Pseudomonas mendocina ymp	5110280
YP_001185817.1	CDS	Pmen_0311	NC_009439.1	319181	320149	D	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase	319181..320149	Pseudomonas mendocina ymp	5110281
YP_001185818.1	CDS	Pmen_0312	NC_009439.1	320439	320597	D	hypothetical protein	320439..320597	Pseudomonas mendocina ymp	5110282
YP_001185819.1	CDS	Pmen_0313	NC_009439.1	320784	321764	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	complement(320784..321764)	Pseudomonas mendocina ymp	5110283
YP_001185820.1	CDS	Pmen_0314	NC_009439.1	321914	322318	D	PFAM: flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL-like protein	321914..322318	Pseudomonas mendocina ymp	5110284
YP_001185821.1	CDS	Pmen_0315	NC_009439.1	322382	323506	R	PFAM: ABC-2 type transporter; ABC transporter	complement(322382..323506)	Pseudomonas mendocina ymp	5110285
YP_001185822.1	CDS	Pmen_0316	NC_009439.1	323506	326211	R	PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; ABC transporter-like protein	complement(323506..326211)	Pseudomonas mendocina ymp	5110286
YP_001185823.1	CDS	Pmen_0317	NC_009439.1	326208	327272	R	PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein	complement(326208..327272)	Pseudomonas mendocina ymp	5110287
YP_001185824.1	CDS	Pmen_0318	NC_009439.1	327366	329204	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase	complement(327366..329204)	Pseudomonas mendocina ymp	5110288
YP_001185825.1	CDS	Pmen_0319	NC_009439.1	329256	329705	R	PFAM: protein of unknown function DUF55; hypothetical protein	complement(329256..329705)	Pseudomonas mendocina ymp	5110289
YP_001185826.1	CDS	Pmen_0320	NC_009439.1	329899	330030	D	hypothetical protein	329899..330030	Pseudomonas mendocina ymp	5110290
YP_001185827.1	CDS	Pmen_0321	NC_009439.1	330083	330679	R	PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase	complement(330083..330679)	Pseudomonas mendocina ymp	5110291
YP_001185828.1	CDS	Pmen_0322	NC_009439.1	330980	331285	R	PFAM: protein of unknown function DUF710; cell division protein ZapA	complement(330980..331285)	Pseudomonas mendocina ymp	5110292
YP_001185829.1	CDS	Pmen_0323	NC_009439.1	331282	331491	R	hypothetical protein	complement(331282..331491)	Pseudomonas mendocina ymp	5110293
YP_001185830.1	CDS	Pmen_0324	NC_009439.1	331682	332236	D	the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein	331682..332236	Pseudomonas mendocina ymp	5110294
YP_001185831.1	CDS	Pmen_0325	NC_009439.1	332255	333589	D	PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; peptidase M24	332255..333589	Pseudomonas mendocina ymp	5110295
YP_001185832.1	CDS	Pmen_0326	NC_009439.1	333594	334778	D	Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase	333594..334778	Pseudomonas mendocina ymp	5110296
YP_001185833.1	CDS	Pmen_0327	NC_009439.1	334881	336104	D	catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	334881..336104	Pseudomonas mendocina ymp	5110297
YP_001185834.1	CDS	Pmen_0328	NC_009439.1	336144	336440	D	hypothetical protein	336144..336440	Pseudomonas mendocina ymp	5110298
YP_001185835.1	CDS	Pmen_0330	NC_009439.1	337706	339322	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	337706..339322	Pseudomonas mendocina ymp	5106936
YP_001185836.1	CDS	gcvT	NC_009439.1	339634	340731	D	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T	339634..340731	Pseudomonas mendocina ymp	5110300
YP_001185837.1	CDS	Pmen_0332	NC_009439.1	340826	341215	D	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H	340826..341215	Pseudomonas mendocina ymp	5110301
YP_001185838.1	CDS	Pmen_0333	NC_009439.1	341362	341676	D	PFAM: regulatory protein, ArsR; ArsR family transcriptional regulator	341362..341676	Pseudomonas mendocina ymp	5110302
YP_001185839.1	CDS	Pmen_0334	NC_009439.1	341673	342107	D	PFAM: protein of unknown function DUF395, YeeE/YedE; hypothetical protein	341673..342107	Pseudomonas mendocina ymp	5110303
YP_001185840.1	CDS	Pmen_0335	NC_009439.1	342110	342529	D	PFAM: protein of unknown function DUF395, YeeE/YedE; hypothetical protein	342110..342529	Pseudomonas mendocina ymp	5110304
YP_001185841.1	CDS	Pmen_0336	NC_009439.1	342544	342732	D	hypothetical protein	342544..342732	Pseudomonas mendocina ymp	5110305
YP_001185842.1	CDS	Pmen_0337	NC_009439.1	342811	343917	R	catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase	complement(342811..343917)	Pseudomonas mendocina ymp	5110306
YP_001185843.1	CDS	Pmen_0338	NC_009439.1	343987	344871	R	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	complement(343987..344871)	Pseudomonas mendocina ymp	5110307
YP_001185844.1	CDS	Pmen_0339	NC_009439.1	345135	345776	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(345135..345776)	Pseudomonas mendocina ymp	5110308
YP_001185845.1	CDS	Pmen_0340	NC_009439.1	345848	346906	R	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	complement(345848..346906)	Pseudomonas mendocina ymp	5110309
YP_001185846.1	CDS	Pmen_0341	NC_009439.1	347083	348462	R	PFAM: glutamine synthetase, catalytic region; L-glutamine synthetase	complement(347083..348462)	Pseudomonas mendocina ymp	5110310
YP_001185847.1	CDS	Pmen_0342	NC_009439.1	349220	350578	D	PFAM: glutamine synthetase, catalytic region; L-glutamine synthetase	349220..350578	Pseudomonas mendocina ymp	5110311
YP_001185848.1	CDS	Pmen_0343	NC_009439.1	350662	352035	D	PFAM: aminotransferase class-III; putative aminotransferase	350662..352035	Pseudomonas mendocina ymp	5110312
YP_001185849.1	CDS	Pmen_0344	NC_009439.1	352167	353264	D	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	352167..353264	Pseudomonas mendocina ymp	5110313
YP_001185850.1	CDS	Pmen_0345	NC_009439.1	353332	354426	D	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	353332..354426	Pseudomonas mendocina ymp	5110314
YP_001185851.1	CDS	Pmen_0346	NC_009439.1	354494	355585	D	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	354494..355585	Pseudomonas mendocina ymp	5110315
YP_001185852.1	CDS	Pmen_0347	NC_009439.1	355639	356793	D	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase	355639..356793	Pseudomonas mendocina ymp	5110316
YP_001185853.1	CDS	Pmen_0348	NC_009439.1	356790	357698	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	356790..357698	Pseudomonas mendocina ymp	5110317
YP_001185854.1	CDS	Pmen_0349	NC_009439.1	357695	358582	D	PFAM: binding-protein-dependent transport systems inner membrane component; ornithine carbamoyltransferase	357695..358582	Pseudomonas mendocina ymp	5110318
YP_001185855.1	CDS	Pmen_0350	NC_009439.1	358663	360027	R	PFAM: adenylate cyclase; adenylate cyclase	complement(358663..360027)	Pseudomonas mendocina ymp	5108272
YP_001185856.1	CDS	Pmen_0351	NC_009439.1	360139	360816	D	PFAM: protein of unknown function DUF47; hypothetical protein	360139..360816	Pseudomonas mendocina ymp	5108273
YP_001185857.1	CDS	Pmen_0352	NC_009439.1	360855	362126	D	PFAM: phosphate transporter; phosphate transporter	360855..362126	Pseudomonas mendocina ymp	5108274
YP_001185858.1	CDS	Pmen_0353	NC_009439.1	362194	363360	D	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase	362194..363360	Pseudomonas mendocina ymp	5108275
YP_001185859.1	CDS	Pmen_0354	NC_009439.1	363424	364722	D	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase	363424..364722	Pseudomonas mendocina ymp	5108276
YP_001185860.1	CDS	Pmen_0355	NC_009439.1	364870	365097	R	hypothetical protein	complement(364870..365097)	Pseudomonas mendocina ymp	5108277
YP_001185861.1	CDS	Pmen_0356	NC_009439.1	365265	366845	R	involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase	complement(365265..366845)	Pseudomonas mendocina ymp	5108278
YP_001185862.1	CDS	Pmen_0357	NC_009439.1	366949	367335	R	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	complement(366949..367335)	Pseudomonas mendocina ymp	5108279
YP_001185863.1	CDS	Pmen_0358	NC_009439.1	367332	369656	R	PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; RNA-binding S1 domain-containing protein	complement(367332..369656)	Pseudomonas mendocina ymp	5108280
YP_001185864.1	CDS	ompR	NC_009439.1	369863	370600	D	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator	369863..370600	Pseudomonas mendocina ymp	5108281
YP_001185865.1	CDS	Pmen_0360	NC_009439.1	370677	371993	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; osmolarity sensor protein envZ	370677..371993	Pseudomonas mendocina ymp	5108282
YP_001185866.1	CDS	Pmen_0361	NC_009439.1	372096	375860	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase	372096..375860	Pseudomonas mendocina ymp	5108283
YP_001185867.1	CDS	Pmen_0362	NC_009439.1	375867	376763	R	PFAM: peptidase U61, LD-carboxypeptidase A; peptidase U61, LD-carboxypeptidase A	complement(375867..376763)	Pseudomonas mendocina ymp	5108284
YP_001185868.1	CDS	Pmen_0363	NC_009439.1	376760	377665	R	TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; 30S ribosomal protein S6 modification protein RimK	complement(376760..377665)	Pseudomonas mendocina ymp	5108285
YP_001185869.1	CDS	Pmen_0364	NC_009439.1	377662	378132	R	PFAM: protein of unknown function DUF785; hypothetical protein	complement(377662..378132)	Pseudomonas mendocina ymp	5108286
YP_001185870.1	CDS	Pmen_0365	NC_009439.1	378165	378677	D	PFAM: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein	378165..378677	Pseudomonas mendocina ymp	5108287
YP_001185871.1	CDS	Pmen_0366	NC_009439.1	378756	379550	R	PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase	complement(378756..379550)	Pseudomonas mendocina ymp	5108288
YP_001185872.1	CDS	hslO	NC_009439.1	379760	380647	D	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin	379760..380647	Pseudomonas mendocina ymp	5108289
YP_001185873.1	CDS	Pmen_0368	NC_009439.1	380805	382346	D	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase	380805..382346	Pseudomonas mendocina ymp	5108290
YP_001185874.1	CDS	Pmen_0369	NC_009439.1	382505	384433	D	TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ	382505..384433	Pseudomonas mendocina ymp	5108291
YP_001185875.1	CDS	Pmen_0370	NC_009439.1	384493	385092	R	PFAM: protein of unknown function DUF330; hypothetical protein	complement(384493..385092)	Pseudomonas mendocina ymp	5108292
YP_001185876.1	CDS	Pmen_0371	NC_009439.1	385089	386006	R	PFAM: Mammalian cell entry related domain protein; hypothetical protein	complement(385089..386006)	Pseudomonas mendocina ymp	5108293
YP_001185877.1	CDS	Pmen_0372	NC_009439.1	386007	386792	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(386007..386792)	Pseudomonas mendocina ymp	5108294
YP_001185878.1	CDS	Pmen_0373	NC_009439.1	386789	387928	R	PFAM: protein of unknown function DUF140; hypothetical protein	complement(386789..387928)	Pseudomonas mendocina ymp	5108295
YP_001185879.1	CDS	Pmen_0374	NC_009439.1	388088	389575	D	flavoprotein involved in K+ transport-like protein	388088..389575	Pseudomonas mendocina ymp	5108296
YP_001185880.1	CDS	Pmen_0375	NC_009439.1	389675	389887	D	hypothetical protein	389675..389887	Pseudomonas mendocina ymp	5108297
YP_001185881.1	CDS	Pmen_0376	NC_009439.1	390127	391047	D	PFAM: aldo/keto reductase; aldo/keto reductase	390127..391047	Pseudomonas mendocina ymp	5108298
YP_001185882.1	CDS	Pmen_0377	NC_009439.1	391049	392341	D	ATP/ADP translocase-like protein	391049..392341	Pseudomonas mendocina ymp	5108299
YP_001185883.1	CDS	Pmen_0378	NC_009439.1	392365	393261	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(392365..393261)	Pseudomonas mendocina ymp	5108300
YP_001185884.1	CDS	Pmen_0379	NC_009439.1	393360	394601	D	PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase	393360..394601	Pseudomonas mendocina ymp	5108301
YP_001185885.1	CDS	Pmen_0380	NC_009439.1	394598	396388	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	394598..396388	Pseudomonas mendocina ymp	5108302
YP_001185886.1	CDS	Pmen_0381	NC_009439.1	396527	397690	D	PFAM: iron-containing alcohol dehydrogenase; alcohol dehydrogenase	396527..397690	Pseudomonas mendocina ymp	5108303
YP_001185887.1	CDS	Pmen_0382	NC_009439.1	397788	398219	D	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	397788..398219	Pseudomonas mendocina ymp	5108304
YP_001185888.1	CDS	Pmen_0383	NC_009439.1	398283	399347	D	hypothetical protein	398283..399347	Pseudomonas mendocina ymp	5108305
YP_001185889.1	CDS	Pmen_0384	NC_009439.1	399344	400114	D	hypothetical protein	399344..400114	Pseudomonas mendocina ymp	5108306
YP_001185890.1	CDS	Pmen_0385	NC_009439.1	400108	400560	R	PFAM: 17 kDa surface antigen; 17 kDa surface antigen	complement(400108..400560)	Pseudomonas mendocina ymp	5108307
YP_001185891.1	CDS	Pmen_0386	NC_009439.1	400692	401780	R	PFAM: regulatory protein, LysR; molybdate metabolism transcriptional regulator	complement(400692..401780)	Pseudomonas mendocina ymp	5108308
YP_001185892.1	CDS	Pmen_0387	NC_009439.1	401979	402473	D	PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit	401979..402473	Pseudomonas mendocina ymp	5108309
YP_001185893.1	CDS	Pmen_0388	NC_009439.1	402470	404041	D	PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH dehydrogenase (quinone)	402470..404041	Pseudomonas mendocina ymp	5108310
YP_001185894.1	CDS	Pmen_0389	NC_009439.1	404057	406891	D	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; formate dehydrogenase subunit alpha	404057..406891	Pseudomonas mendocina ymp	5108311
YP_001185895.1	CDS	Pmen_0390	NC_009439.1	407040	407288	D	formate dehydrogenase subunit delta	407040..407288	Pseudomonas mendocina ymp	5108312
YP_001185896.1	CDS	Pmen_0391	NC_009439.1	407489	408313	D	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; formate dehydrogenase family accessory protein FdhD	407489..408313	Pseudomonas mendocina ymp	5108313
YP_001185897.1	CDS	Pmen_0392	NC_009439.1	408370	409032	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase	complement(408370..409032)	Pseudomonas mendocina ymp	5108314
YP_001185898.1	CDS	nudE	NC_009439.1	409142	409708	D	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE	409142..409708	Pseudomonas mendocina ymp	5108315
YP_001185899.1	CDS	Pmen_0394	NC_009439.1	409705	410523	D	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; 3'(2'),5'-bisphosphate nucleotidase	409705..410523	Pseudomonas mendocina ymp	5108316
YP_001185900.1	CDS	Pmen_0395	NC_009439.1	410576	412483	R	PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase	complement(410576..412483)	Pseudomonas mendocina ymp	5108317
YP_001185901.1	CDS	pyrC	NC_009439.1	412740	414011	R	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase	complement(412740..414011)	Pseudomonas mendocina ymp	5108318
YP_001185902.1	CDS	pyrB	NC_009439.1	414011	415018	R	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit	complement(414011..415018)	Pseudomonas mendocina ymp	5108319
YP_001185903.1	CDS	Pmen_0398	NC_009439.1	415030	415533	R	regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase	complement(415030..415533)	Pseudomonas mendocina ymp	5108320
YP_001185904.1	CDS	Pmen_0399	NC_009439.1	415680	416114	R	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein	complement(415680..416114)	Pseudomonas mendocina ymp	5108321
YP_001185905.1	CDS	Pmen_0400	NC_009439.1	416114	416719	R	PFAM: protein of unknown function DUF179; hypothetical protein	complement(416114..416719)	Pseudomonas mendocina ymp	5108322
YP_001185906.1	CDS	Pmen_0401	NC_009439.1	416778	417674	R	TIGRFAM: TonB family protein; TonB family protein	complement(416778..417674)	Pseudomonas mendocina ymp	5108323
YP_001185907.1	CDS	Pmen_0402	NC_009439.1	417763	418719	R	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase	complement(417763..418719)	Pseudomonas mendocina ymp	5108324
YP_001185908.1	CDS	Pmen_0403	NC_009439.1	418961	419368	D	PFAM: response regulator receiver; response regulator receiver protein	418961..419368	Pseudomonas mendocina ymp	5108325
YP_001185909.1	CDS	Pmen_0404	NC_009439.1	419415	419780	D	PFAM: response regulator receiver; response regulator receiver protein	419415..419780	Pseudomonas mendocina ymp	5108326
YP_001185910.1	CDS	Pmen_0405	NC_009439.1	419826	420359	D	PFAM: CheW domain protein; putative CheW protein	419826..420359	Pseudomonas mendocina ymp	5108327
YP_001185911.1	CDS	Pmen_0406	NC_009439.1	420444	422480	D	PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	420444..422480	Pseudomonas mendocina ymp	5108328
YP_001185912.1	CDS	Pmen_0407	NC_009439.1	422541	423401	D	PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase	422541..423401	Pseudomonas mendocina ymp	5108329
YP_001185913.1	CDS	Pmen_0408	NC_009439.1	423412	430683	D	PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; CheA signal transduction histidine kinase	423412..430683	Pseudomonas mendocina ymp	5108330
YP_001185914.1	CDS	Pmen_0409	NC_009439.1	430680	431699	D	PFAM: CheB methylesterase; CheB methylesterase	430680..431699	Pseudomonas mendocina ymp	5108331
YP_001185915.1	CDS	Pmen_0410	NC_009439.1	431710	432180	D	PFAM: CheW domain protein; putative CheW protein	431710..432180	Pseudomonas mendocina ymp	5108332
YP_001185916.1	CDS	Pmen_0411	NC_009439.1	432261	433742	R	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein	complement(432261..433742)	Pseudomonas mendocina ymp	5108333
YP_001185917.1	CDS	Pmen_0412	NC_009439.1	433950	434675	R	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE	complement(433950..434675)	Pseudomonas mendocina ymp	5108334
YP_001185918.1	CDS	Pmen_0413	NC_009439.1	434805	436208	R	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase	complement(434805..436208)	Pseudomonas mendocina ymp	5108335
YP_001185919.1	CDS	Pmen_0414	NC_009439.1	436372	437868	R	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase	complement(436372..437868)	Pseudomonas mendocina ymp	5108336
YP_001185920.1	CDS	Pmen_0415	NC_009439.1	437939	439096	R	PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase	complement(437939..439096)	Pseudomonas mendocina ymp	5108337
YP_001185921.1	CDS	Pmen_0416	NC_009439.1	439138	440532	R	PFAM: Gluconate transporter; Citrate transporter; citrate transporter	complement(439138..440532)	Pseudomonas mendocina ymp	5108338
YP_001185922.1	CDS	Pmen_0417	NC_009439.1	440708	441466	D	PFAM: regulatory protein, IclR; IclR family transcriptional regulator	440708..441466	Pseudomonas mendocina ymp	5108339
YP_001185923.1	CDS	Pmen_0418	NC_009439.1	441564	442154	D	PFAM: cytochrome B561; cytochrome B561	441564..442154	Pseudomonas mendocina ymp	5108340
YP_001185924.1	CDS	Pmen_0419	NC_009439.1	442213	442788	D	PFAM: YceI family protein; hypothetical protein	442213..442788	Pseudomonas mendocina ymp	5108341
YP_001185925.1	CDS	Pmen_0420	NC_009439.1	442890	444776	R	PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase	complement(442890..444776)	Pseudomonas mendocina ymp	5108342
YP_001185926.1	CDS	Pmen_0421	NC_009439.1	444964	445722	R	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(444964..445722)	Pseudomonas mendocina ymp	5108343
YP_001185927.1	CDS	Pmen_0422	NC_009439.1	445775	447148	R	PFAM: conserved hypothetical protein 730; hypothetical protein	complement(445775..447148)	Pseudomonas mendocina ymp	5108344
YP_001185928.1	CDS	Pmen_0423	NC_009439.1	447247	448011	R	hypothetical protein	complement(447247..448011)	Pseudomonas mendocina ymp	5108345
YP_001185929.1	CDS	Pmen_0424	NC_009439.1	447981	448847	R	hypothetical protein	complement(447981..448847)	Pseudomonas mendocina ymp	5108346
YP_001185930.1	CDS	Pmen_0425	NC_009439.1	449065	450111	D	TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein	449065..450111	Pseudomonas mendocina ymp	5108347
YP_001185931.1	CDS	Pmen_0426	NC_009439.1	450481	451080	D	transposase	450481..451080	Pseudomonas mendocina ymp	5108348
YP_001185932.1	CDS	Pmen_0427	NC_009439.1	451432	452733	D	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	451432..452733	Pseudomonas mendocina ymp	5108349
YP_001185933.1	CDS	Pmen_0429	NC_009439.1	453606	456260	D	PFAM: regulatory protein, LuxR; regulatory protein LuxR	453606..456260	Pseudomonas mendocina ymp	5106937
YP_001185934.1	CDS	Pmen_0430	NC_009439.1	456310	457467	D	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase	456310..457467	Pseudomonas mendocina ymp	5108351
YP_001185935.1	CDS	Pmen_0431	NC_009439.1	457751	459313	R	PFAM: transposase IS66; transposase IS66	complement(457751..459313)	Pseudomonas mendocina ymp	5108352
YP_001185936.1	CDS	Pmen_0432	NC_009439.1	459333	459692	R	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	complement(459333..459692)	Pseudomonas mendocina ymp	5108353
YP_001185937.1	CDS	Pmen_0433	NC_009439.1	459892	460230	D	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	459892..460230	Pseudomonas mendocina ymp	5108354
YP_001185938.1	CDS	Pmen_0434	NC_009439.1	460424	461986	R	PFAM: transposase IS66; transposase IS66	complement(460424..461986)	Pseudomonas mendocina ymp	5108355
YP_001185939.1	CDS	Pmen_0435	NC_009439.1	462006	462365	R	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	complement(462006..462365)	Pseudomonas mendocina ymp	5108356
YP_001185940.1	CDS	Pmen_0436	NC_009439.1	462619	463311	R	PFAM: OmpW family protein; OmpW family protein	complement(462619..463311)	Pseudomonas mendocina ymp	5108357
YP_001185941.1	CDS	Pmen_0437	NC_009439.1	463413	465056	R	PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase	complement(463413..465056)	Pseudomonas mendocina ymp	5108358
YP_001185942.1	CDS	Pmen_0439	NC_009439.1	465679	466980	R	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	complement(465679..466980)	Pseudomonas mendocina ymp	5106938
YP_001185943.1	CDS	Pmen_0440	NC_009439.1	468254	469705	R	PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase	complement(468254..469705)	Pseudomonas mendocina ymp	5108360
YP_001185944.1	CDS	Pmen_0441	NC_009439.1	469752	470285	R	PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein	complement(469752..470285)	Pseudomonas mendocina ymp	5108361
YP_001185945.1	CDS	Pmen_0442	NC_009439.1	470321	470719	R	PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein	complement(470321..470719)	Pseudomonas mendocina ymp	5108362
YP_001185946.1	CDS	Pmen_0443	NC_009439.1	470936	472141	R	PFAM: fatty acid desaturase; alkane 1-monooxygenase	complement(470936..472141)	Pseudomonas mendocina ymp	5108363
YP_001185947.1	CDS	Pmen_0445	NC_009439.1	472350	473366	R	hypothetical protein	complement(472350..473366)	Pseudomonas mendocina ymp	5106939
YP_001185948.1	CDS	Pmen_0446	NC_009439.1	473359	475107	R	hypothetical protein	complement(473359..475107)	Pseudomonas mendocina ymp	5108365
YP_001185949.1	CDS	Pmen_0447	NC_009439.1	475224	476462	R	hypothetical protein	complement(475224..476462)	Pseudomonas mendocina ymp	5108366
YP_001185950.1	CDS	Pmen_0448	NC_009439.1	476509	477354	R	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase	complement(476509..477354)	Pseudomonas mendocina ymp	5108367
YP_001185951.1	CDS	Pmen_0449	NC_009439.1	477445	478854	R	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase	complement(477445..478854)	Pseudomonas mendocina ymp	5108368
YP_001185952.1	CDS	Pmen_0450	NC_009439.1	479186	479572	D	hypothetical protein	479186..479572	Pseudomonas mendocina ymp	5108369
YP_001185953.1	CDS	Pmen_0451	NC_009439.1	479729	480175	D	cytochrome c556-like protein	479729..480175	Pseudomonas mendocina ymp	5108370
YP_001185954.1	CDS	Pmen_0452	NC_009439.1	480169	480570	R	PFAM: protein of unknown function DUF1090; hypothetical protein	complement(480169..480570)	Pseudomonas mendocina ymp	5108371
YP_001185955.1	CDS	ligB	NC_009439.1	480654	482342	R	this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB	complement(480654..482342)	Pseudomonas mendocina ymp	5108372
YP_001185956.1	CDS	Pmen_0454	NC_009439.1	482483	483673	R	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase	complement(482483..483673)	Pseudomonas mendocina ymp	5108373
YP_001185957.1	CDS	Pmen_0455	NC_009439.1	483670	484674	R	PFAM: regulatory protein, ArsR; Methyltransferase type 11; Methyltransferase type 12; ArsR family transcriptional regulator	complement(483670..484674)	Pseudomonas mendocina ymp	5108374
YP_001185958.1	CDS	Pmen_0456	NC_009439.1	484747	485631	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(484747..485631)	Pseudomonas mendocina ymp	5108375
YP_001185959.1	CDS	Pmen_0457	NC_009439.1	485741	486895	D	PFAM: C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein	485741..486895	Pseudomonas mendocina ymp	5108376
YP_001185960.1	CDS	Pmen_0458	NC_009439.1	487008	489008	D	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase	487008..489008	Pseudomonas mendocina ymp	5108377
YP_001185961.1	CDS	Pmen_0459	NC_009439.1	489134	490201	D	TIGRFAM: D-erythrose-4-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase; D-erythrose-4-phosphate dehydrogenase	489134..490201	Pseudomonas mendocina ymp	5108378
YP_001185962.1	CDS	pgk	NC_009439.1	490206	491366	D	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase	490206..491366	Pseudomonas mendocina ymp	5108379
YP_001185963.1	CDS	Pmen_0461	NC_009439.1	491720	492046	D	hypothetical protein	491720..492046	Pseudomonas mendocina ymp	5108380
YP_001185964.1	CDS	Pmen_0462	NC_009439.1	492144	493208	D	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase	492144..493208	Pseudomonas mendocina ymp	5108381
YP_001185965.1	CDS	Pmen_0463	NC_009439.1	493287	493970	R	hypothetical protein	complement(493287..493970)	Pseudomonas mendocina ymp	5108382
YP_001185966.1	CDS	Pmen_0464	NC_009439.1	494365	494841	D	hypothetical protein	494365..494841	Pseudomonas mendocina ymp	5108383
YP_001185967.1	CDS	Pmen_0465	NC_009439.1	494855	495955	D	PFAM: glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase	494855..495955	Pseudomonas mendocina ymp	5108384
YP_001185968.1	CDS	Pmen_0466	NC_009439.1	496011	496502	D	PFAM: protein of unknown function DUF45; hypothetical protein	496011..496502	Pseudomonas mendocina ymp	5108385
YP_001185969.1	CDS	Pmen_0467	NC_009439.1	496604	496837	R	hypothetical protein	complement(496604..496837)	Pseudomonas mendocina ymp	5108386
YP_001185970.1	CDS	Pmen_0468	NC_009439.1	496900	497382	R	GreA/GreB family elongation factor	complement(496900..497382)	Pseudomonas mendocina ymp	5108387
YP_001185971.1	CDS	Pmen_0469	NC_009439.1	497444	499249	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; diguanylate cyclase	complement(497444..499249)	Pseudomonas mendocina ymp	5108388
YP_001185972.1	CDS	Pmen_0470	NC_009439.1	499316	501484	R	TIGRFAM: hypothetical membrane protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893, YccS/YhfK; YccS/YhfK family integral membrane protein	complement(499316..501484)	Pseudomonas mendocina ymp	5108389
YP_001185973.1	CDS	Pmen_0471	NC_009439.1	501656	503101	D	PFAM: protein of unknown function DUF107; nodulation efficiency protein NfeD	501656..503101	Pseudomonas mendocina ymp	5108390
YP_001185974.1	CDS	Pmen_0472	NC_009439.1	503101	503850	D	PFAM: band 7 protein; hypothetical protein	503101..503850	Pseudomonas mendocina ymp	5108391
YP_001185975.1	CDS	Pmen_0473	NC_009439.1	503958	505079	D	TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; L-alanine dehydrogenase	503958..505079	Pseudomonas mendocina ymp	5108392
YP_001185976.1	CDS	Pmen_0474	NC_009439.1	505225	505968	D	PFAM: intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase	505225..505968	Pseudomonas mendocina ymp	5108393
YP_001185977.1	CDS	Pmen_0475	NC_009439.1	505976	507874	R	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; citrate transporter	complement(505976..507874)	Pseudomonas mendocina ymp	5108394
YP_001185978.1	CDS	Pmen_0476	NC_009439.1	508050	509234	R	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; hypothetical protein	complement(508050..509234)	Pseudomonas mendocina ymp	5108395
YP_001185979.1	CDS	Pmen_0477	NC_009439.1	509436	510176	D	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	509436..510176	Pseudomonas mendocina ymp	5108396
YP_001185980.1	CDS	Pmen_0478	NC_009439.1	510143	511411	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase	complement(510143..511411)	Pseudomonas mendocina ymp	5108397
YP_001185981.1	CDS	Pmen_0479	NC_009439.1	511452	512828	R	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA	complement(511452..512828)	Pseudomonas mendocina ymp	5108398
YP_001185982.1	CDS	Pmen_0480	NC_009439.1	512878	514344	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(512878..514344)	Pseudomonas mendocina ymp	5108399
YP_001185983.1	CDS	Pmen_0481	NC_009439.1	514463	516160	R	catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase	complement(514463..516160)	Pseudomonas mendocina ymp	5108400
YP_001185984.1	CDS	Pmen_0482	NC_009439.1	516240	517712	R	catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase	complement(516240..517712)	Pseudomonas mendocina ymp	5108401
YP_001185985.1	CDS	Pmen_0483	NC_009439.1	518024	518614	R	HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI	complement(518024..518614)	Pseudomonas mendocina ymp	5108402
YP_001185986.1	CDS	Pmen_0484	NC_009439.1	518799	519650	R	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein	complement(518799..519650)	Pseudomonas mendocina ymp	5108403
YP_001185987.1	CDS	Pmen_0485	NC_009439.1	519847	520791	R	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein	complement(519847..520791)	Pseudomonas mendocina ymp	5108404
YP_001185988.1	CDS	Pmen_0486	NC_009439.1	520819	521703	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(520819..521703)	Pseudomonas mendocina ymp	5108405
YP_001185989.1	CDS	Pmen_0487	NC_009439.1	521696	522901	R	TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase	complement(521696..522901)	Pseudomonas mendocina ymp	5108406
YP_001185990.1	CDS	Pmen_0488	NC_009439.1	523866	524810	R	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein	complement(523866..524810)	Pseudomonas mendocina ymp	5108407
YP_001185991.1	CDS	Pmen_0489	NC_009439.1	524902	525183	D	hypothetical protein	524902..525183	Pseudomonas mendocina ymp	5108408
YP_001185992.1	CDS	Pmen_0490	NC_009439.1	525496	526590	D	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; transcriptional regulator	525496..526590	Pseudomonas mendocina ymp	5108409
YP_001185993.1	CDS	Pmen_0491	NC_009439.1	526776	527027	R	hypothetical protein	complement(526776..527027)	Pseudomonas mendocina ymp	5108410
YP_001185994.1	CDS	Pmen_0492	NC_009439.1	527053	527826	R	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta	complement(527053..527826)	Pseudomonas mendocina ymp	5108411
YP_001185995.1	CDS	Pmen_0493	NC_009439.1	527889	529121	R	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha	complement(527889..529121)	Pseudomonas mendocina ymp	5108412
YP_001185996.1	CDS	Pmen_0494	NC_009439.1	529159	531120	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein	complement(529159..531120)	Pseudomonas mendocina ymp	5108413
YP_001185997.1	CDS	Pmen_0495	NC_009439.1	531273	533333	R	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase	complement(531273..533333)	Pseudomonas mendocina ymp	5108414
YP_001185998.1	CDS	Pmen_0496	NC_009439.1	533432	533962	R	hypothetical protein	complement(533432..533962)	Pseudomonas mendocina ymp	5108415
YP_001185999.1	CDS	Pmen_0497	NC_009439.1	534093	535070	R	PFAM: peptidase M19, renal dipeptidase; membrane dipeptidase	complement(534093..535070)	Pseudomonas mendocina ymp	5108416
YP_001186000.1	CDS	Pmen_0498	NC_009439.1	535258	536208	R	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; transcriptional regulator	complement(535258..536208)	Pseudomonas mendocina ymp	5108417
YP_001186001.1	CDS	Pmen_0499	NC_009439.1	536433	537371	D	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein	536433..537371	Pseudomonas mendocina ymp	5108418
YP_001186002.1	CDS	Pmen_0500	NC_009439.1	537473	538357	D	PFAM: protein of unknown function DUF849; hypothetical protein	537473..538357	Pseudomonas mendocina ymp	5108419
YP_001186003.1	CDS	Pmen_0501	NC_009439.1	538491	539456	D	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase	538491..539456	Pseudomonas mendocina ymp	5108420
YP_001186004.1	CDS	Pmen_0502	NC_009439.1	539565	540041	D	thioesterase-like protein	539565..540041	Pseudomonas mendocina ymp	5108421
YP_001186005.1	CDS	Pmen_0503	NC_009439.1	540131	541318	D	TIGRFAM: gamma-butyrobetaine hydroxylase; PFAM: Taurine catabolism dioxygenase TauD/TfdA; gamma-butyrobetaine hydroxylase	540131..541318	Pseudomonas mendocina ymp	5108422
YP_001186006.1	CDS	Pmen_0504	NC_009439.1	541364	541759	R	PFAM: protein of unknown function UPF0153; hypothetical protein	complement(541364..541759)	Pseudomonas mendocina ymp	5108423
YP_001186007.1	CDS	Pmen_0505	NC_009439.1	541984	545607	D	hypothetical protein	541984..545607	Pseudomonas mendocina ymp	5108424
YP_001186008.1	CDS	Pmen_0506	NC_009439.1	545604	546956	D	hypothetical protein	545604..546956	Pseudomonas mendocina ymp	5108425
YP_001186009.1	CDS	Pmen_0507	NC_009439.1	547154	548827	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS/PAC sensor-containing diguanylate cyclase	547154..548827	Pseudomonas mendocina ymp	5108426
YP_001186010.1	CDS	Pmen_0508	NC_009439.1	548890	549897	D	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase	548890..549897	Pseudomonas mendocina ymp	5108427
YP_001186011.1	CDS	Pmen_0509	NC_009439.1	549901	550500	D	PFAM: protein of unknown function DUF924; hypothetical protein	549901..550500	Pseudomonas mendocina ymp	5108428
YP_001186012.1	CDS	Pmen_0510	NC_009439.1	550573	550824	D	hypothetical protein	550573..550824	Pseudomonas mendocina ymp	5108134
YP_001186013.1	CDS	Pmen_0511	NC_009439.1	550837	551379	D	PFAM: Lipocalin family protein; lipocalin family protein	550837..551379	Pseudomonas mendocina ymp	5108135
YP_001186014.1	CDS	Pmen_0512	NC_009439.1	551505	551942	R	hypothetical protein	complement(551505..551942)	Pseudomonas mendocina ymp	5108136
YP_001186015.1	CDS	Pmen_0513	NC_009439.1	552021	552992	D	TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase	552021..552992	Pseudomonas mendocina ymp	5108137
YP_001186016.1	CDS	Pmen_0514	NC_009439.1	552989	553426	D	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase	552989..553426	Pseudomonas mendocina ymp	5108138
YP_001186017.1	CDS	Pmen_0515	NC_009439.1	553508	554218	R	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE	complement(553508..554218)	Pseudomonas mendocina ymp	5108139
YP_001186018.1	CDS	Pmen_0516	NC_009439.1	554215	555009	R	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC	complement(554215..555009)	Pseudomonas mendocina ymp	5108140
YP_001186019.1	CDS	Pmen_0517	NC_009439.1	555006	555347	R	TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein subunit TatB	complement(555006..555347)	Pseudomonas mendocina ymp	5108141
YP_001186020.1	CDS	Pmen_0518	NC_009439.1	555351	555584	R	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin arginine-targeting protein translocase	complement(555351..555584)	Pseudomonas mendocina ymp	5108142
YP_001186021.1	CDS	hisE	NC_009439.1	555607	555942	R	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase	complement(555607..555942)	Pseudomonas mendocina ymp	5108143
YP_001186022.1	CDS	hisI	NC_009439.1	555935	556333	R	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase	complement(555935..556333)	Pseudomonas mendocina ymp	5108144
YP_001186023.1	CDS	Pmen_0521	NC_009439.1	556404	557987	R	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; 2-octaprenylphenol hydroxylase	complement(556404..557987)	Pseudomonas mendocina ymp	5108145
YP_001186024.1	CDS	Pmen_0522	NC_009439.1	557984	558601	R	PFAM: protein of unknown function DUF1243; hypothetical protein	complement(557984..558601)	Pseudomonas mendocina ymp	5108146
YP_001186025.1	CDS	ubiE	NC_009439.1	558601	559371	R	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase	complement(558601..559371)	Pseudomonas mendocina ymp	5108147
YP_001186026.1	CDS	Pmen_0524	NC_009439.1	559518	559793	D	TIGRFAM: putative polyhydroxyalkanoic acid system protein; putative polyhydroxyalkanoic acid system protein	559518..559793	Pseudomonas mendocina ymp	5108148
YP_001186027.1	CDS	Pmen_0525	NC_009439.1	559965	560411	D	TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; poly(hydroxyalkanoate) granule-associated protein	559965..560411	Pseudomonas mendocina ymp	5108149
YP_001186028.1	CDS	Pmen_0526	NC_009439.1	560422	561276	D	TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; poly(hydroxyalkanoate) granule-associated protein	560422..561276	Pseudomonas mendocina ymp	5108150
YP_001186029.1	CDS	Pmen_0527	NC_009439.1	561359	561973	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(561359..561973)	Pseudomonas mendocina ymp	5108151
YP_001186030.1	CDS	Pmen_0528	NC_009439.1	562044	563726	R	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class II; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; poly(R)-hydroxyalkanoic acid synthase, class II	complement(562044..563726)	Pseudomonas mendocina ymp	5108152
YP_001186031.1	CDS	Pmen_0529	NC_009439.1	563935	564792	R	TIGRFAM: poly(3-hydroxyalkanoate) depolymerase; PFAM: alpha/beta hydrolase fold; poly(3-hydroxyalkanoate) depolymerase	complement(563935..564792)	Pseudomonas mendocina ymp	5108153
YP_001186032.1	CDS	Pmen_0530	NC_009439.1	564946	566625	R	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class II; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; poly(R)-hydroxyalkanoic acid synthase, class II	complement(564946..566625)	Pseudomonas mendocina ymp	5108154
YP_001186033.1	CDS	Pmen_0531	NC_009439.1	567015	567386	R	PFAM: protein of unknown function DUF971; hypothetical protein	complement(567015..567386)	Pseudomonas mendocina ymp	5108155
YP_001186034.1	CDS	hslU	NC_009439.1	567468	568808	R	heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU	complement(567468..568808)	Pseudomonas mendocina ymp	5108156
YP_001186035.1	CDS	Pmen_0533	NC_009439.1	568848	569378	R	heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit	complement(568848..569378)	Pseudomonas mendocina ymp	5108157
YP_001186036.1	CDS	Pmen_0534	NC_009439.1	569475	570149	R	PFAM: Sporulation domain protein; sporulation domain-containing protein	complement(569475..570149)	Pseudomonas mendocina ymp	5108158
YP_001186037.1	CDS	argS	NC_009439.1	570150	571889	R	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase	complement(570150..571889)	Pseudomonas mendocina ymp	5108159
YP_001186038.1	CDS	Pmen_0536	NC_009439.1	572061	574292	R	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA	complement(572061..574292)	Pseudomonas mendocina ymp	5108160
YP_001186039.1	CDS	Pmen_0537	NC_009439.1	574437	574649	D	PFAM: ribosomal protein L31; 50S ribosomal protein L31	574437..574649	Pseudomonas mendocina ymp	5108161
YP_001186040.1	CDS	Pmen_0538	NC_009439.1	574676	575476	D	PFAM: nuclease (SNase domain protein); nuclease	574676..575476	Pseudomonas mendocina ymp	5108162
YP_001186041.1	CDS	Pmen_0539	NC_009439.1	575473	576909	D	PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p	575473..576909	Pseudomonas mendocina ymp	5108163
YP_001186042.1	CDS	Pmen_0540	NC_009439.1	577014	578282	D	PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; malate dehydrogenase	577014..578282	Pseudomonas mendocina ymp	5108164
YP_001186043.1	CDS	Pmen_0541	NC_009439.1	578348	580759	R	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein	complement(578348..580759)	Pseudomonas mendocina ymp	5108165
YP_001186044.1	CDS	Pmen_0542	NC_009439.1	580941	582005	D	TIGRFAM: type IV pilus assembly protein PilM; type IV pilus assembly protein PilM	580941..582005	Pseudomonas mendocina ymp	5108166
YP_001186045.1	CDS	Pmen_0543	NC_009439.1	582005	582577	D	PFAM: Fimbrial assembly family protein; fimbrial assembly family protein	582005..582577	Pseudomonas mendocina ymp	5108167
YP_001186046.1	CDS	Pmen_0544	NC_009439.1	582574	583194	D	PFAM: Pilus assembly protein, PilO; pilus assembly protein, PilO	582574..583194	Pseudomonas mendocina ymp	5108168
YP_001186047.1	CDS	Pmen_0545	NC_009439.1	583191	583718	D	PFAM: Pilus assembly protein, PilQ; pilus assembly protein, PilQ	583191..583718	Pseudomonas mendocina ymp	5108169
YP_001186048.1	CDS	Pmen_0546	NC_009439.1	583774	585894	D	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; type IV pilus secretin PilQ	583774..585894	Pseudomonas mendocina ymp	5108170
YP_001186049.1	CDS	aroK	NC_009439.1	585927	586418	D	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase	585927..586418	Pseudomonas mendocina ymp	5108171
YP_001186050.1	CDS	aroB	NC_009439.1	586594	587697	D	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase	586594..587697	Pseudomonas mendocina ymp	5108172
YP_001186051.1	CDS	Pmen_0549	NC_009439.1	587708	589309	D	PFAM: Sporulation domain protein; sporulation domain-containing protein	587708..589309	Pseudomonas mendocina ymp	5108173
YP_001186052.1	CDS	gltB	NC_009439.1	589547	593995	D	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha	589547..593995	Pseudomonas mendocina ymp	5108174
YP_001186053.1	CDS	gltD	NC_009439.1	594030	595448	D	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta	594030..595448	Pseudomonas mendocina ymp	5108175
YP_001186054.1	CDS	hemE	NC_009439.1	595567	596634	D	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase	595567..596634	Pseudomonas mendocina ymp	5108176
YP_001186055.1	CDS	Pmen_0553	NC_009439.1	596765	597535	D	PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase	596765..597535	Pseudomonas mendocina ymp	5108177
YP_001186056.1	CDS	Pmen_0554	NC_009439.1	597581	598378	R	PFAM: UspA domain protein; UspA domain-containing protein	complement(597581..598378)	Pseudomonas mendocina ymp	5108178
YP_001186057.1	CDS	Pmen_0555	NC_009439.1	598502	598945	R	hypothetical protein	complement(598502..598945)	Pseudomonas mendocina ymp	5108179
YP_001186058.1	CDS	Pmen_0556	NC_009439.1	599167	599601	R	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin	complement(599167..599601)	Pseudomonas mendocina ymp	5108180
YP_001186059.1	CDS	Pmen_0557	NC_009439.1	599660	601450	R	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; citrate transporter	complement(599660..601450)	Pseudomonas mendocina ymp	5108181
YP_001186060.1	CDS	Pmen_0558	NC_009439.1	601741	603204	R	PFAM: protein of unknown function UPF0061; hypothetical protein	complement(601741..603204)	Pseudomonas mendocina ymp	5108182
YP_001186061.1	CDS	Pmen_0559	NC_009439.1	603216	606551	R	small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA	complement(603216..606551)	Pseudomonas mendocina ymp	5108183
YP_001186062.1	CDS	Pmen_0560	NC_009439.1	606653	608398	R	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter	complement(606653..608398)	Pseudomonas mendocina ymp	5108184
YP_001186063.1	CDS	Pmen_0561	NC_009439.1	608561	610429	R	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein	complement(608561..610429)	Pseudomonas mendocina ymp	5108185
YP_001186064.1	CDS	Pmen_0562	NC_009439.1	610486	611622	R	PFAM: 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase	complement(610486..611622)	Pseudomonas mendocina ymp	5108186
YP_001186065.1	CDS	Pmen_0563	NC_009439.1	611804	614530	D	TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; type I restriction-modification system, M subunit	611804..614530	Pseudomonas mendocina ymp	5108187
YP_001186066.1	CDS	Pmen_0564	NC_009439.1	614523	615770	D	PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit	614523..615770	Pseudomonas mendocina ymp	5108188
YP_001186067.1	CDS	Pmen_0565	NC_009439.1	615763	616416	D	hypothetical protein	615763..616416	Pseudomonas mendocina ymp	5108189
YP_001186068.1	CDS	Pmen_0566	NC_009439.1	616413	617495	D	PFAM: Appr-1-p processing domain protein; appr-1-p processing domain-containing protein	616413..617495	Pseudomonas mendocina ymp	5108190
YP_001186069.1	CDS	Pmen_0567	NC_009439.1	617504	620767	D	TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease	617504..620767	Pseudomonas mendocina ymp	5108191
YP_001186070.1	CDS	Pmen_0568	NC_009439.1	620768	621475	D	PFAM: protein of unknown function DUF45; hypothetical protein	620768..621475	Pseudomonas mendocina ymp	5108192
YP_001186071.1	CDS	Pmen_0569	NC_009439.1	621578	622426	D	PFAM: protein of unknown function DUF519; hypothetical protein	621578..622426	Pseudomonas mendocina ymp	5109532
YP_001186072.1	CDS	Pmen_0570	NC_009439.1	622503	623756	R	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase	complement(622503..623756)	Pseudomonas mendocina ymp	5109533
YP_001186073.1	CDS	Pmen_0571	NC_009439.1	623840	623974	R	hypothetical protein	complement(623840..623974)	Pseudomonas mendocina ymp	5109534
YP_001186074.1	CDS	Pmen_0572	NC_009439.1	624048	624707	R	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase	complement(624048..624707)	Pseudomonas mendocina ymp	5109535
YP_001186075.1	CDS	Pmen_0573	NC_009439.1	624759	627482	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase	complement(624759..627482)	Pseudomonas mendocina ymp	5109536
YP_001186076.1	CDS	Pmen_0574	NC_009439.1	627618	628151	D	hypothetical protein	627618..628151	Pseudomonas mendocina ymp	5109537
YP_001186077.1	CDS	aceF	NC_009439.1	628304	630274	R	E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase	complement(628304..630274)	Pseudomonas mendocina ymp	5109538
YP_001186078.1	CDS	aceE	NC_009439.1	630286	632931	R	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1	complement(630286..632931)	Pseudomonas mendocina ymp	5109539
YP_001186079.1	CDS	Pmen_0577	NC_009439.1	633203	636145	D	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase	633203..636145	Pseudomonas mendocina ymp	5109540
YP_001186080.1	CDS	Pmen_0578	NC_009439.1	636209	637132	D	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase	636209..637132	Pseudomonas mendocina ymp	5109541
YP_001186081.1	CDS	Pmen_0579	NC_009439.1	637193	638236	D	TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase II	637193..638236	Pseudomonas mendocina ymp	5109542
YP_001186082.1	CDS	Pmen_0580	NC_009439.1	638238	639242	D	TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase I	638238..639242	Pseudomonas mendocina ymp	5109543
YP_001186083.1	CDS	Pmen_0581	NC_009439.1	639252	640376	D	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	639252..640376	Pseudomonas mendocina ymp	5109544
YP_001186084.1	CDS	Pmen_0582	NC_009439.1	640382	641179	D	PFAM: lipopolysaccharide kinase; lipopolysaccharide kinase	640382..641179	Pseudomonas mendocina ymp	5109545
YP_001186085.1	CDS	Pmen_0583	NC_009439.1	641179	641913	D	PFAM: lipopolysaccharide kinase; lipopolysaccharide kinase	641179..641913	Pseudomonas mendocina ymp	5109546
YP_001186086.1	CDS	Pmen_0584	NC_009439.1	641910	642653	D	PFAM: lipopolysaccharide kinase; lipopolysaccharide kinase	641910..642653	Pseudomonas mendocina ymp	5109547
YP_001186087.1	CDS	Pmen_0585	NC_009439.1	642653	644098	D	hypothetical protein	642653..644098	Pseudomonas mendocina ymp	5109548
YP_001186088.1	CDS	Pmen_0586	NC_009439.1	644111	645865	D	PFAM: Carbamoyltransferase; carbamoyltransferase	644111..645865	Pseudomonas mendocina ymp	5109549
YP_001186089.1	CDS	Pmen_0587	NC_009439.1	645852	646970	D	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	645852..646970	Pseudomonas mendocina ymp	5109550
YP_001186090.1	CDS	Pmen_0588	NC_009439.1	647007	647879	D	hypothetical protein	647007..647879	Pseudomonas mendocina ymp	5109551
YP_001186091.1	CDS	Pmen_0589	NC_009439.1	647882	649027	D	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	647882..649027	Pseudomonas mendocina ymp	5109552
YP_001186092.1	CDS	Pmen_0590	NC_009439.1	649024	649908	D	PFAM: glycosyl transferase, family 2; glycosyl transferase family protein	649024..649908	Pseudomonas mendocina ymp	5109553
YP_001186093.1	CDS	Pmen_0591	NC_009439.1	649911	650567	D	acetyltransferase	649911..650567	Pseudomonas mendocina ymp	5109554
YP_001186094.1	CDS	Pmen_0594	NC_009439.1	652493	654334	D	TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA	652493..654334	Pseudomonas mendocina ymp	5109556
YP_001186095.1	CDS	Pmen_0595	NC_009439.1	654334	655230	D	PFAM: Mig-14 family protein; Mig-14 family protein	654334..655230	Pseudomonas mendocina ymp	5109557
YP_001186096.1	CDS	Pmen_0596	NC_009439.1	655235	656623	D	PFAM: LmbE family protein; LmbE family protein	655235..656623	Pseudomonas mendocina ymp	5109558
YP_001186097.1	CDS	Pmen_0597	NC_009439.1	656685	658106	D	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase	656685..658106	Pseudomonas mendocina ymp	5109559
YP_001186098.1	CDS	Pmen_0598	NC_009439.1	658257	659537	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	658257..659537	Pseudomonas mendocina ymp	5109560
YP_001186099.1	CDS	Pmen_0599	NC_009439.1	659551	660762	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	659551..660762	Pseudomonas mendocina ymp	5109561
YP_001186100.1	CDS	Pmen_0600	NC_009439.1	660813	661538	R	PFAM: protein of unknown function DUF330; hypothetical protein	complement(660813..661538)	Pseudomonas mendocina ymp	5109562
YP_001186101.1	CDS	Pmen_0601	NC_009439.1	661710	663959	R	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A	complement(661710..663959)	Pseudomonas mendocina ymp	5109563
YP_001186102.1	CDS	Pmen_0602	NC_009439.1	663967	664491	R	aspartyl protease-like protein	complement(663967..664491)	Pseudomonas mendocina ymp	5109564
YP_001186103.1	CDS	Pmen_0603	NC_009439.1	664488	665471	R	hypothetical protein	complement(664488..665471)	Pseudomonas mendocina ymp	5109565
YP_001186104.1	CDS	Pmen_0604	NC_009439.1	665471	667369	R	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B	complement(665471..667369)	Pseudomonas mendocina ymp	5109566
YP_001186105.1	CDS	Pmen_0605	NC_009439.1	667385	667996	R	PFAM: protein of unknown function UPF0227; hypothetical protein	complement(667385..667996)	Pseudomonas mendocina ymp	5109567
YP_001186106.1	CDS	Pmen_0606	NC_009439.1	668109	668924	R	PFAM: metallophosphoesterase; Calcineurin phosphoesterase C-terminal domain protein; calcineurin phosphoesterase C-terminal domain-containing protein	complement(668109..668924)	Pseudomonas mendocina ymp	5109568
YP_001186107.1	CDS	Pmen_0607	NC_009439.1	669071	669517	R	PFAM: protein of unknown function DUF1249; hypothetical protein	complement(669071..669517)	Pseudomonas mendocina ymp	5109569
YP_001186108.1	CDS	Pmen_0608	NC_009439.1	669514	670113	R	PFAM: NUDIX hydrolase; NUDIX hydrolase	complement(669514..670113)	Pseudomonas mendocina ymp	5109570
YP_001186109.1	CDS	Pmen_0609	NC_009439.1	670217	672100	R	required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC	complement(670217..672100)	Pseudomonas mendocina ymp	5109571
YP_001186110.1	CDS	Pmen_0610	NC_009439.1	672523	673965	D	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion outer membrane protein	672523..673965	Pseudomonas mendocina ymp	5109572
YP_001186111.1	CDS	Pmen_0611	NC_009439.1	674098	675363	R	catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase	complement(674098..675363)	Pseudomonas mendocina ymp	5109573
YP_001186112.1	CDS	Pmen_0612	NC_009439.1	675407	676294	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(675407..676294)	Pseudomonas mendocina ymp	5109574
YP_001186113.1	CDS	Pmen_0613	NC_009439.1	676383	676715	D	PFAM: small multidrug resistance protein; small multidrug resistance protein	676383..676715	Pseudomonas mendocina ymp	5109575
YP_001186114.1	CDS	Pmen_0614	NC_009439.1	676779	677954	D	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	676779..677954	Pseudomonas mendocina ymp	5109576
YP_001186115.1	CDS	Pmen_0615	NC_009439.1	677951	678763	D	PFAM: aldo/keto reductase; aldo/keto reductase	677951..678763	Pseudomonas mendocina ymp	5109577
YP_001186116.1	CDS	Pmen_0616	NC_009439.1	678905	679816	D	hypothetical protein	678905..679816	Pseudomonas mendocina ymp	5109578
YP_001186117.1	CDS	Pmen_0617	NC_009439.1	680013	681545	R	hypothetical protein	complement(680013..681545)	Pseudomonas mendocina ymp	5109579
YP_001186118.1	CDS	Pmen_0618	NC_009439.1	681646	682935	D	TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase, subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase, type 3; phosphoserine phosphatase	681646..682935	Pseudomonas mendocina ymp	5109580
YP_001186119.1	CDS	Pmen_0619	NC_009439.1	682988	685057	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; response regulator receiver modulated diguanylate cyclase/phosphodiesterase	complement(682988..685057)	Pseudomonas mendocina ymp	5109581
YP_001186120.1	CDS	Pmen_0620	NC_009439.1	685122	686924	R	hypothetical protein	complement(685122..686924)	Pseudomonas mendocina ymp	5109582
YP_001186121.1	CDS	psd	NC_009439.1	687091	687951	R	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase	complement(687091..687951)	Pseudomonas mendocina ymp	5109583
YP_001186122.1	CDS	Pmen_0622	NC_009439.1	688008	688823	R	PFAM: Rhodanese domain protein; rhodanese domain-containing protein	complement(688008..688823)	Pseudomonas mendocina ymp	5109584
YP_001186123.1	CDS	Pmen_0623	NC_009439.1	688890	690413	R	PFAM: HDOD; hypothetical protein	complement(688890..690413)	Pseudomonas mendocina ymp	5109585
YP_001186124.1	CDS	Pmen_0624	NC_009439.1	690531	691382	D	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA	690531..691382	Pseudomonas mendocina ymp	5109586
YP_001186125.1	CDS	motB	NC_009439.1	691399	692388	D	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB	691399..692388	Pseudomonas mendocina ymp	5109587
YP_001186126.1	CDS	Pmen_0626	NC_009439.1	692382	693413	R	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase	complement(692382..693413)	Pseudomonas mendocina ymp	5109588
YP_001186127.1	CDS	Pmen_0627	NC_009439.1	693550	694293	D	hypothetical protein	693550..694293	Pseudomonas mendocina ymp	5109589
YP_001186128.1	CDS	Pmen_0628	NC_009439.1	694350	694892	D	3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease	694350..694892	Pseudomonas mendocina ymp	5109590
YP_001186129.1	CDS	Pmen_0629	NC_009439.1	694998	696071	R	TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; putative iron-sulfur cluster binding protein	complement(694998..696071)	Pseudomonas mendocina ymp	5109591
YP_001186130.1	CDS	Pmen_0630	NC_009439.1	696133	697632	D	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; carbohydrate kinase	696133..697632	Pseudomonas mendocina ymp	5109592
YP_001186131.1	CDS	Pmen_0631	NC_009439.1	697620	698087	D	PFAM: protein of unknown function UPF0079; hypothetical protein	697620..698087	Pseudomonas mendocina ymp	5109593
YP_001186132.1	CDS	Pmen_0632	NC_009439.1	698110	699525	D	PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase	698110..699525	Pseudomonas mendocina ymp	5109594
YP_001186133.1	CDS	mutL	NC_009439.1	699534	701405	D	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein	699534..701405	Pseudomonas mendocina ymp	5109595
YP_001186134.1	CDS	miaA	NC_009439.1	701405	702379	D	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase	701405..702379	Pseudomonas mendocina ymp	5109596
YP_001186135.1	CDS	hfq	NC_009439.1	702481	702741	D	Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq	702481..702741	Pseudomonas mendocina ymp	5109597
YP_001186136.1	CDS	Pmen_0636	NC_009439.1	702754	704055	D	PFAM: GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein	702754..704055	Pseudomonas mendocina ymp	5109598
YP_001186137.1	CDS	Pmen_0637	NC_009439.1	704153	705322	D	TIGRFAM: HflK protein; PFAM: band 7 protein; HflK protein	704153..705322	Pseudomonas mendocina ymp	5109599
YP_001186138.1	CDS	Pmen_0638	NC_009439.1	705322	706191	D	TIGRFAM: HflC protein; PFAM: band 7 protein; HflC protein	705322..706191	Pseudomonas mendocina ymp	5109600
YP_001186139.1	CDS	Pmen_0639	NC_009439.1	706332	706517	D	hypothetical protein	706332..706517	Pseudomonas mendocina ymp	5109601
YP_001186140.1	CDS	hisZ	NC_009439.1	706555	707742	D	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit	706555..707742	Pseudomonas mendocina ymp	5109602
YP_001186141.1	CDS	Pmen_0641	NC_009439.1	707799	709094	D	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase	707799..709094	Pseudomonas mendocina ymp	5109603
YP_001186142.1	CDS	Pmen_0642	NC_009439.1	709303	711237	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	709303..711237	Pseudomonas mendocina ymp	5109604
YP_001186143.1	CDS	Pmen_0643	NC_009439.1	711813	714299	D	TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein; RNAse R	711813..714299	Pseudomonas mendocina ymp	5106941
YP_001186144.1	CDS	Pmen_0644	NC_009439.1	714296	715048	D	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; RNA methyltransferase	714296..715048	Pseudomonas mendocina ymp	5109606
YP_001186145.1	CDS	rpsF	NC_009439.1	715224	715646	D	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6	715224..715646	Pseudomonas mendocina ymp	5109607
YP_001186146.1	CDS	rpsR	NC_009439.1	715675	715905	D	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18	715675..715905	Pseudomonas mendocina ymp	5109608
YP_001186147.1	CDS	Pmen_0647	NC_009439.1	715942	716835	D	hypothetical protein	715942..716835	Pseudomonas mendocina ymp	5109609
YP_001186148.1	CDS	rplI	NC_009439.1	716857	717303	D	in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9	716857..717303	Pseudomonas mendocina ymp	5109610
YP_001186149.1	CDS	Pmen_0649	NC_009439.1	717423	718817	D	unwinds double stranded DNA; replicative DNA helicase	717423..718817	Pseudomonas mendocina ymp	5108979
YP_001186150.1	CDS	Pmen_0650	NC_009439.1	718895	719971	D	TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase	718895..719971	Pseudomonas mendocina ymp	5108980
YP_001186151.1	CDS	Pmen_0651	NC_009439.1	719994	721877	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; diguanylate cyclase	complement(719994..721877)	Pseudomonas mendocina ymp	5108981
YP_001186152.1	CDS	Pmen_0652	NC_009439.1	722078	724369	D	PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein	722078..724369	Pseudomonas mendocina ymp	5108982
YP_001186153.1	CDS	Pmen_0653	NC_009439.1	724487	725734	D	hypothetical protein	724487..725734	Pseudomonas mendocina ymp	5108983
YP_001186154.1	CDS	Pmen_0654	NC_009439.1	725731	726837	D	hypothetical protein	725731..726837	Pseudomonas mendocina ymp	5108984
YP_001186155.1	CDS	Pmen_0655	NC_009439.1	727025	730318	D	PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; transglutaminase domain-containing protein	727025..730318	Pseudomonas mendocina ymp	5108985
YP_001186156.1	CDS	Pmen_0656	NC_009439.1	730430	732916	D	PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; hypothetical protein	730430..732916	Pseudomonas mendocina ymp	5108986
YP_001186157.1	CDS	Pmen_0657	NC_009439.1	732913	733806	D	PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; transglutaminase domain-containing protein	732913..733806	Pseudomonas mendocina ymp	5108987
YP_001186158.1	CDS	Pmen_0658	NC_009439.1	733845	734294	R	TIGRFAM: Azurin; PFAM: blue (type 1) copper domain protein; azurin	complement(733845..734294)	Pseudomonas mendocina ymp	5108988
YP_001186159.1	CDS	Pmen_0659	NC_009439.1	734684	735619	R	PFAM: protein of unknown function DUF808; hypothetical protein	complement(734684..735619)	Pseudomonas mendocina ymp	5108989
YP_001186160.1	CDS	Pmen_0660	NC_009439.1	735685	736272	R	PFAM: conserved hypothetical protein 730; hypothetical protein	complement(735685..736272)	Pseudomonas mendocina ymp	5108990
YP_001186161.1	CDS	Pmen_0661	NC_009439.1	736509	737123	R	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	complement(736509..737123)	Pseudomonas mendocina ymp	5108991
YP_001186162.1	CDS	Pmen_0662	NC_009439.1	737645	738559	R	PFAM: glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase	complement(737645..738559)	Pseudomonas mendocina ymp	5108992
YP_001186163.1	CDS	Pmen_0663	NC_009439.1	738702	739274	R	PFAM: HupE/UreJ protein; HupE/UreJ protein	complement(738702..739274)	Pseudomonas mendocina ymp	5108993
YP_001186164.1	CDS	Pmen_0664	NC_009439.1	739296	739910	R	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; urease accessory protein UreG	complement(739296..739910)	Pseudomonas mendocina ymp	5108994
YP_001186165.1	CDS	Pmen_0665	NC_009439.1	739927	740601	R	PFAM: Urease accessory protein UreF; urease accessory protein UreF	complement(739927..740601)	Pseudomonas mendocina ymp	5108995
YP_001186166.1	CDS	ureE	NC_009439.1	740639	741139	R	involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE	complement(740639..741139)	Pseudomonas mendocina ymp	5108996
YP_001186167.1	CDS	Pmen_0667	NC_009439.1	741303	742001	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(741303..742001)	Pseudomonas mendocina ymp	5108997
YP_001186168.1	CDS	Pmen_0668	NC_009439.1	742087	743175	D	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin	742087..743175	Pseudomonas mendocina ymp	5108998
YP_001186169.1	CDS	Pmen_0669	NC_009439.1	743172	744254	D	PFAM: fatty acid desaturase; fatty acid desaturase	743172..744254	Pseudomonas mendocina ymp	5108999
YP_001186170.1	CDS	Pmen_0670	NC_009439.1	744316	744795	R	hypothetical protein	complement(744316..744795)	Pseudomonas mendocina ymp	5109000
YP_001186171.1	CDS	Pmen_0671	NC_009439.1	745070	745969	D	PFAM: Auxin Efflux Carrier; auxin efflux carrier	745070..745969	Pseudomonas mendocina ymp	5109001
YP_001186172.1	CDS	Pmen_0672	NC_009439.1	746063	747010	D	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	746063..747010	Pseudomonas mendocina ymp	5109002
YP_001186173.1	CDS	Pmen_0673	NC_009439.1	747169	747675	D	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ	747169..747675	Pseudomonas mendocina ymp	5109003
YP_001186174.1	CDS	Pmen_0674	NC_009439.1	747675	749000	D	PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM	747675..749000	Pseudomonas mendocina ymp	5109004
YP_001186175.1	CDS	Pmen_0675	NC_009439.1	749136	750173	D	PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	749136..750173	Pseudomonas mendocina ymp	5109005
YP_001186176.1	CDS	Pmen_0676	NC_009439.1	750514	751887	D	PFAM: glutamine synthetase, catalytic region; L-glutamine synthetase	750514..751887	Pseudomonas mendocina ymp	5109006
YP_001186177.1	CDS	Pmen_0677	NC_009439.1	751987	753375	D	PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase	751987..753375	Pseudomonas mendocina ymp	5109007
YP_001186178.1	CDS	Pmen_0678	NC_009439.1	753384	754553	D	PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; iron-containing alcohol dehydrogenase	753384..754553	Pseudomonas mendocina ymp	5109008
YP_001186179.1	CDS	Pmen_0679	NC_009439.1	754662	755195	R	hypothetical protein	complement(754662..755195)	Pseudomonas mendocina ymp	5109009
YP_001186180.1	CDS	Pmen_0680	NC_009439.1	755251	755733	R	hypothetical protein	complement(755251..755733)	Pseudomonas mendocina ymp	5109010
YP_001186181.1	CDS	Pmen_0681	NC_009439.1	755734	756090	R	hypothetical protein	complement(755734..756090)	Pseudomonas mendocina ymp	5109011
YP_001186182.1	CDS	Pmen_0682	NC_009439.1	756198	757463	R	molecular chaperone-like protein	complement(756198..757463)	Pseudomonas mendocina ymp	5109012
YP_001186183.1	CDS	Pmen_0683	NC_009439.1	757531	758505	R	hypothetical protein	complement(757531..758505)	Pseudomonas mendocina ymp	5109013
YP_001186184.1	CDS	Pmen_0684	NC_009439.1	758698	759135	R	hypothetical protein	complement(758698..759135)	Pseudomonas mendocina ymp	5109014
YP_001186185.1	CDS	Pmen_0685	NC_009439.1	759170	759898	R	hypothetical protein	complement(759170..759898)	Pseudomonas mendocina ymp	5109015
YP_001186186.1	CDS	Pmen_0686	NC_009439.1	760066	760989	D	PFAM: periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator	760066..760989	Pseudomonas mendocina ymp	5109016
YP_001186187.1	CDS	Pmen_0687	NC_009439.1	761069	761836	D	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	761069..761836	Pseudomonas mendocina ymp	5109017
YP_001186188.1	CDS	Pmen_0688	NC_009439.1	761918	762919	D	PFAM: type II secretion system protein; type II secretion system protein	761918..762919	Pseudomonas mendocina ymp	5109018
YP_001186189.1	CDS	Pmen_0689	NC_009439.1	763047	763919	D	2,3-dimethylmalate lyase	763047..763919	Pseudomonas mendocina ymp	5109019
YP_001186190.1	CDS	Pmen_0690	NC_009439.1	763989	764255	D	TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger, DksA/TraR C4-type; hypothetical protein	763989..764255	Pseudomonas mendocina ymp	5109020
YP_001186191.1	CDS	Pmen_0691	NC_009439.1	764334	764777	D	PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein	764334..764777	Pseudomonas mendocina ymp	5109021
YP_001186192.1	CDS	ureC	NC_009439.1	764817	766517	R	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha	complement(764817..766517)	Pseudomonas mendocina ymp	5109022
YP_001186193.1	CDS	ureB	NC_009439.1	766605	766910	R	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta	complement(766605..766910)	Pseudomonas mendocina ymp	5109023
YP_001186194.1	CDS	Pmen_0694	NC_009439.1	766918	767418	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(766918..767418)	Pseudomonas mendocina ymp	5109024
YP_001186195.1	CDS	ureA	NC_009439.1	767422	767724	R	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma	complement(767422..767724)	Pseudomonas mendocina ymp	5109025
YP_001186196.1	CDS	Pmen_0696	NC_009439.1	767910	768746	R	PFAM: Urease accessory protein UreD; urease accessory protein UreD	complement(767910..768746)	Pseudomonas mendocina ymp	5109026
YP_001186197.1	CDS	Pmen_0697	NC_009439.1	768984	769682	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(768984..769682)	Pseudomonas mendocina ymp	5109027
YP_001186198.1	CDS	Pmen_0698	NC_009439.1	769771	770613	R	PFAM: ABC transporter related; ABC transporter-like protein	complement(769771..770613)	Pseudomonas mendocina ymp	5109028
YP_001186199.1	CDS	Pmen_0699	NC_009439.1	770610	771701	R	PFAM: inner-membrane translocator; inner-membrane translocator	complement(770610..771701)	Pseudomonas mendocina ymp	5109029
YP_001186200.1	CDS	Pmen_0700	NC_009439.1	771701	773269	R	PFAM: inner-membrane translocator; SMART: PBS lyase HEAT domain protein repeat-containing protein; inner-membrane translocator	complement(771701..773269)	Pseudomonas mendocina ymp	5109030
YP_001186201.1	CDS	Pmen_0701	NC_009439.1	773427	774692	R	branched chain amino acid ABC transporter substrate-binding protein	complement(773427..774692)	Pseudomonas mendocina ymp	5109031
YP_001186202.1	CDS	Pmen_0702	NC_009439.1	774767	775489	R	PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator	complement(774767..775489)	Pseudomonas mendocina ymp	5109032
YP_001186203.1	CDS	Pmen_0703	NC_009439.1	775491	779120	R	TIGRFAM: urea amidolyase related protein; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; urea amidolyase-like protein	complement(775491..779120)	Pseudomonas mendocina ymp	5109033
YP_001186204.1	CDS	Pmen_0704	NC_009439.1	779238	781052	R	catalyzes the hydrolysis of allophanate; allophanate hydrolase	complement(779238..781052)	Pseudomonas mendocina ymp	5109034
YP_001186205.1	CDS	Pmen_0705	NC_009439.1	781313	781909	R	PFAM: multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein	complement(781313..781909)	Pseudomonas mendocina ymp	5109035
YP_001186206.1	CDS	Pmen_0706	NC_009439.1	781943	784729	R	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; integral membrane sensor hybrid histidine kinase	complement(781943..784729)	Pseudomonas mendocina ymp	5109036
YP_001186207.1	CDS	Pmen_0707	NC_009439.1	784839	786128	R	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase	complement(784839..786128)	Pseudomonas mendocina ymp	5109037
YP_001186208.1	CDS	purH	NC_009439.1	786348	787955	R	involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	complement(786348..787955)	Pseudomonas mendocina ymp	5109038
YP_001186209.1	CDS	fis	NC_009439.1	788027	788347	R	Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis	complement(788027..788347)	Pseudomonas mendocina ymp	5109039
YP_001186210.1	CDS	Pmen_0710	NC_009439.1	788344	789342	R	TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; nifR3 family TIM-barrel protein	complement(788344..789342)	Pseudomonas mendocina ymp	5109040
YP_001186211.1	CDS	Pmen_0711	NC_009439.1	789570	790844	R	TIGRFAM: MJ0042 family finger-like protein; Zinc finger-domain-containing protein	complement(789570..790844)	Pseudomonas mendocina ymp	5109041
YP_001186212.1	CDS	prmA	NC_009439.1	791002	791880	R	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase	complement(791002..791880)	Pseudomonas mendocina ymp	5109042
YP_001186213.1	CDS	Pmen_0713	NC_009439.1	792020	793375	R	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit	complement(792020..793375)	Pseudomonas mendocina ymp	5109043
YP_001186214.1	CDS	Pmen_0714	NC_009439.1	793393	793857	R	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	complement(793393..793857)	Pseudomonas mendocina ymp	5109044
YP_001186215.1	CDS	Pmen_0715	NC_009439.1	793908	794354	R	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase	complement(793908..794354)	Pseudomonas mendocina ymp	5109045
YP_001186216.1	CDS	dipZ	NC_009439.1	794498	796285	R	two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein	complement(794498..796285)	Pseudomonas mendocina ymp	5109046
YP_001186217.1	CDS	Pmen_0717	NC_009439.1	796443	798407	R	PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(796443..798407)	Pseudomonas mendocina ymp	5109047
YP_001186218.1	CDS	Pmen_0718	NC_009439.1	798517	799845	R	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion outer membrane protein	complement(798517..799845)	Pseudomonas mendocina ymp	5109048
YP_001186219.1	CDS	Pmen_0719	NC_009439.1	799849	801165	R	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein	complement(799849..801165)	Pseudomonas mendocina ymp	5109049
YP_001186220.1	CDS	Pmen_0720	NC_009439.1	801175	802893	R	TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase	complement(801175..802893)	Pseudomonas mendocina ymp	5109050
YP_001186221.1	CDS	Pmen_0721	NC_009439.1	803022	808316	R	PFAM: Hemolysin-type calcium-binding region; hemolysin-type calcium-binding protein	complement(803022..808316)	Pseudomonas mendocina ymp	5109051
YP_001186222.1	CDS	Pmen_0722	NC_009439.1	808572	811127	R	PFAM: Hemolysin-type calcium-binding region; hemolysin-type calcium-binding protein	complement(808572..811127)	Pseudomonas mendocina ymp	5109052
YP_001186223.1	CDS	Pmen_0723	NC_009439.1	811263	812885	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase	complement(811263..812885)	Pseudomonas mendocina ymp	5109053
YP_001186224.1	CDS	Pmen_0724	NC_009439.1	813143	814201	D	hypothetical protein	813143..814201	Pseudomonas mendocina ymp	5109054
YP_001186225.1	CDS	Pmen_0725	NC_009439.1	814201	814737	D	PFAM: NUDIX hydrolase; NUDIX hydrolase	814201..814737	Pseudomonas mendocina ymp	5109055
YP_001186226.1	CDS	Pmen_0726	NC_009439.1	815016	815450	D	PFAM: translation initiation factor SUI1; translation initiation factor 1 (eIF-1/SUI1)	815016..815450	Pseudomonas mendocina ymp	5109056
YP_001186227.1	CDS	Pmen_0727	NC_009439.1	815573	817486	D	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase	815573..817486	Pseudomonas mendocina ymp	5109057
YP_001186228.1	CDS	Pmen_0728	NC_009439.1	817548	818003	R	hypothetical protein	complement(817548..818003)	Pseudomonas mendocina ymp	5108822
YP_001186229.1	CDS	Pmen_0729	NC_009439.1	818038	819387	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein	complement(818038..819387)	Pseudomonas mendocina ymp	5108823
YP_001186230.1	CDS	Pmen_0730	NC_009439.1	819463	824457	D	PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin domain-containing protein	819463..824457	Pseudomonas mendocina ymp	5108824
YP_001186231.1	CDS	Pmen_0731	NC_009439.1	824542	825072	D	PFAM: protein of unknown function DUF1568; hypothetical protein	824542..825072	Pseudomonas mendocina ymp	5108825
YP_001186232.1	CDS	Pmen_0732	NC_009439.1	825145	827469	D	penicillin-insensitive transglycosylase/transpeptidase; penicillin-binding protein 1C	825145..827469	Pseudomonas mendocina ymp	5108826
YP_001186233.1	CDS	Pmen_0733	NC_009439.1	827538	828305	D	amino acid ABC transporter periplasmic protein	827538..828305	Pseudomonas mendocina ymp	5108827
YP_001186234.1	CDS	Pmen_0734	NC_009439.1	828453	830384	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	828453..830384	Pseudomonas mendocina ymp	5108828
YP_001186235.1	CDS	Pmen_0735	NC_009439.1	830433	831560	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	complement(830433..831560)	Pseudomonas mendocina ymp	5108829
YP_001186236.1	CDS	Pmen_0736	NC_009439.1	831722	832171	R	PFAM: protein of unknown function DUF606; hypothetical protein	complement(831722..832171)	Pseudomonas mendocina ymp	5108830
YP_001186237.1	CDS	Pmen_0737	NC_009439.1	832208	832693	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(832208..832693)	Pseudomonas mendocina ymp	5108831
YP_001186238.1	CDS	Pmen_0738	NC_009439.1	832710	833264	R	hypothetical protein	complement(832710..833264)	Pseudomonas mendocina ymp	5108832
YP_001186239.1	CDS	Pmen_0739	NC_009439.1	833287	833868	R	hypothetical protein	complement(833287..833868)	Pseudomonas mendocina ymp	5108833
YP_001186240.1	CDS	Pmen_0740	NC_009439.1	833944	834693	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase	complement(833944..834693)	Pseudomonas mendocina ymp	5108834
YP_001186241.1	CDS	Pmen_0741	NC_009439.1	834690	834995	R	hypothetical protein	complement(834690..834995)	Pseudomonas mendocina ymp	5108835
YP_001186242.1	CDS	Pmen_0742	NC_009439.1	835136	835993	R	PFAM: MaoC domain protein dehydratase; dehydratase	complement(835136..835993)	Pseudomonas mendocina ymp	5108836
YP_001186243.1	CDS	Pmen_0743	NC_009439.1	836183	837175	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	836183..837175	Pseudomonas mendocina ymp	5108837
YP_001186244.1	CDS	fabG	NC_009439.1	837314	838669	R	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	complement(837314..838669)	Pseudomonas mendocina ymp	5108838
YP_001186245.1	CDS	Pmen_0745	NC_009439.1	838896	840173	D	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	838896..840173	Pseudomonas mendocina ymp	5108839
YP_001186246.1	CDS	Pmen_0746	NC_009439.1	840571	842010	D	PFAM: cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I	840571..842010	Pseudomonas mendocina ymp	5108840
YP_001186247.1	CDS	Pmen_0747	NC_009439.1	842013	843020	D	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II	842013..843020	Pseudomonas mendocina ymp	5108841
YP_001186248.1	CDS	Pmen_0748	NC_009439.1	843174	843323	D	hypothetical protein	843174..843323	Pseudomonas mendocina ymp	5108842
YP_001186249.1	CDS	Pmen_0749	NC_009439.1	843393	844835	D	PFAM: peptidase U62, modulator of DNA gyrase; C69 family peptidase	843393..844835	Pseudomonas mendocina ymp	5108843
YP_001186250.1	CDS	Pmen_0750	NC_009439.1	844835	846154	D	Zn-dependent protease-like protein	844835..846154	Pseudomonas mendocina ymp	5108844
YP_001186251.1	CDS	Pmen_0751	NC_009439.1	846160	847293	R	PFAM: methyltransferase small; 16S rRNA m(2)G 1207 methyltransferase	complement(846160..847293)	Pseudomonas mendocina ymp	5108845
YP_001186252.1	CDS	Pmen_0752	NC_009439.1	847354	848130	D	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit	847354..848130	Pseudomonas mendocina ymp	5108846
YP_001186253.1	CDS	Pmen_0753	NC_009439.1	848242	848484	D	PFAM: protein of unknown function DUF465; hypothetical protein	848242..848484	Pseudomonas mendocina ymp	5108847
YP_001186254.1	CDS	Pmen_0754	NC_009439.1	848563	848841	D	PFAM: protein of unknown function DUF465; hypothetical protein	848563..848841	Pseudomonas mendocina ymp	5108848
YP_001186255.1	CDS	Pmen_0755	NC_009439.1	848881	849375	R	acetyltransferase-like protein	complement(848881..849375)	Pseudomonas mendocina ymp	5108849
YP_001186256.1	CDS	Pmen_0756	NC_009439.1	849469	850830	D	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA	849469..850830	Pseudomonas mendocina ymp	5108850
YP_001186257.1	CDS	Pmen_0757	NC_009439.1	851173	851544	R	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	complement(851173..851544)	Pseudomonas mendocina ymp	5108851
YP_001186258.1	CDS	Pmen_0758	NC_009439.1	851710	852216	D	hypothetical protein	851710..852216	Pseudomonas mendocina ymp	5108852
YP_001186259.1	CDS	glyA	NC_009439.1	852382	853635	R	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase	complement(852382..853635)	Pseudomonas mendocina ymp	5108853
YP_001186260.1	CDS	Pmen_0760	NC_009439.1	853831	858045	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase	complement(853831..858045)	Pseudomonas mendocina ymp	5108854
YP_001186261.1	CDS	Pmen_0761	NC_009439.1	858061	858303	R	hypothetical protein	complement(858061..858303)	Pseudomonas mendocina ymp	5108855
YP_001186262.1	CDS	Pmen_0762	NC_009439.1	858465	860132	D	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein	858465..860132	Pseudomonas mendocina ymp	5108856
YP_001186263.1	CDS	Pmen_0763	NC_009439.1	860229	860561	R	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	complement(860229..860561)	Pseudomonas mendocina ymp	5108857
YP_001186264.1	CDS	Pmen_0764	NC_009439.1	860571	862916	R	PFAM: protein of unknown function DUF1631; hypothetical protein	complement(860571..862916)	Pseudomonas mendocina ymp	5108858
YP_001186265.1	CDS	Pmen_0765	NC_009439.1	863780	865081	R	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase	complement(863780..865081)	Pseudomonas mendocina ymp	5106944
YP_001186266.1	CDS	Pmen_0766	NC_009439.1	865145	865318	R	hypothetical protein	complement(865145..865318)	Pseudomonas mendocina ymp	5108860
YP_001186267.1	CDS	Pmen_0767	NC_009439.1	865343	865891	R	PFAM: MOSC domain containing protein; MOSC domain-containing protein	complement(865343..865891)	Pseudomonas mendocina ymp	5108861
YP_001186268.1	CDS	Pmen_0768	NC_009439.1	865888	866517	R	hypothetical protein	complement(865888..866517)	Pseudomonas mendocina ymp	5108862
YP_001186269.1	CDS	Pmen_0769	NC_009439.1	866644	867333	D	hypothetical protein	866644..867333	Pseudomonas mendocina ymp	5108863
YP_001186270.1	CDS	Pmen_0770	NC_009439.1	867357	867656	D	hypothetical protein	867357..867656	Pseudomonas mendocina ymp	5108864
YP_001186271.1	CDS	Pmen_0771	NC_009439.1	867708	867902	R	PFAM: protein of unknown function DUF329; zinc-binding protein	complement(867708..867902)	Pseudomonas mendocina ymp	5108865
YP_001186272.1	CDS	coaE	NC_009439.1	867899	868507	R	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase	complement(867899..868507)	Pseudomonas mendocina ymp	5108866
YP_001186273.1	CDS	Pmen_0773	NC_009439.1	868675	869544	R	PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; prepilin peptidase	complement(868675..869544)	Pseudomonas mendocina ymp	5108867
YP_001186274.1	CDS	Pmen_0774	NC_009439.1	869545	870762	R	PFAM: type II secretion system protein; type II secretion system protein	complement(869545..870762)	Pseudomonas mendocina ymp	5108868
YP_001186275.1	CDS	Pmen_0775	NC_009439.1	870765	872468	R	TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; type IV-A pilus assembly ATPase PilB	complement(870765..872468)	Pseudomonas mendocina ymp	5108869
YP_001186276.1	CDS	Pmen_0776	NC_009439.1	872735	874036	R	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	complement(872735..874036)	Pseudomonas mendocina ymp	5108870
YP_001186277.1	CDS	Pmen_0777	NC_009439.1	874162	874557	D	PFAM: Fimbrial protein pilin; fimbrial protein pilin	874162..874557	Pseudomonas mendocina ymp	5108871
YP_001186278.1	CDS	Pmen_0778	NC_009439.1	874786	875634	R	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase	complement(874786..875634)	Pseudomonas mendocina ymp	5108872
YP_001186279.1	CDS	Pmen_0779	NC_009439.1	876061	878361	D	PFAM: protein of unknown function DUF1631; hypothetical protein	876061..878361	Pseudomonas mendocina ymp	5108873
YP_001186280.1	CDS	Pmen_0780	NC_009439.1	878735	879286	D	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetyl-anhydromuranmyl-L-alanine amidase	878735..879286	Pseudomonas mendocina ymp	5108874
YP_001186281.1	CDS	Pmen_0781	NC_009439.1	879289	880122	D	signaling modulator of AmpD, AmpE	879289..880122	Pseudomonas mendocina ymp	5108875
YP_001186282.1	CDS	Pmen_0782	NC_009439.1	880464	882494	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	880464..882494	Pseudomonas mendocina ymp	5108876
YP_001186283.1	CDS	Pmen_0783	NC_009439.1	882516	883295	R	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase	complement(882516..883295)	Pseudomonas mendocina ymp	5108877
YP_001186284.1	CDS	Pmen_0784	NC_009439.1	883449	885491	D	PFAM: AsmA family protein; AsmA family protein	883449..885491	Pseudomonas mendocina ymp	5108878
YP_001186285.1	CDS	Pmen_0785	NC_009439.1	885568	886560	R	binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR	complement(885568..886560)	Pseudomonas mendocina ymp	5108879
YP_001186286.1	CDS	Pmen_0786	NC_009439.1	886785	889643	D	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing enzyme; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; phosphoenolpyruvate--protein phosphotransferase	886785..889643	Pseudomonas mendocina ymp	5108880
YP_001186287.1	CDS	Pmen_0787	NC_009439.1	889643	890563	D	PFAM: PfkB domain protein; 1-phosphofructokinase	889643..890563	Pseudomonas mendocina ymp	5108881
YP_001186288.1	CDS	Pmen_0788	NC_009439.1	890575	892299	D	TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; PTS system fructose subfamily transporter subunit IIC	890575..892299	Pseudomonas mendocina ymp	5108882
YP_001186289.1	CDS	Pmen_0789	NC_009439.1	892417	894603	D	hypothetical protein	892417..894603	Pseudomonas mendocina ymp	5108883
YP_001186290.1	CDS	Pmen_0790	NC_009439.1	894837	895544	R	PFAM: Silent information regulator protein Sir2; silent information regulator protein Sir2	complement(894837..895544)	Pseudomonas mendocina ymp	5108884
YP_001186291.1	CDS	Pmen_0791	NC_009439.1	895712	898132	D	PFAM: Pyrrolo-quinoline quinone; quinoprotein glucose dehydrogenase	895712..898132	Pseudomonas mendocina ymp	5108885
YP_001186292.1	CDS	prfC	NC_009439.1	898169	899752	R	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3	complement(898169..899752)	Pseudomonas mendocina ymp	5108886
YP_001186293.1	CDS	Pmen_0793	NC_009439.1	899989	902520	D	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase	899989..902520	Pseudomonas mendocina ymp	5108887
YP_001186294.1	CDS	Pmen_0794	NC_009439.1	902611	903309	D	PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	902611..903309	Pseudomonas mendocina ymp	5108888
YP_001186295.1	CDS	Pmen_0795	NC_009439.1	903306	904640	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	903306..904640	Pseudomonas mendocina ymp	5108889
YP_001186296.1	CDS	Pmen_0796	NC_009439.1	904729	906678	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor	904729..906678	Pseudomonas mendocina ymp	5108890
YP_001186297.1	CDS	Pmen_0797	NC_009439.1	906678	907781	D	PFAM: periplasmic binding protein; periplasmic binding protein	906678..907781	Pseudomonas mendocina ymp	5108891
YP_001186298.1	CDS	Pmen_0798	NC_009439.1	907793	908824	D	PFAM: transport system permease protein; transport system permease	907793..908824	Pseudomonas mendocina ymp	5108892
YP_001186299.1	CDS	Pmen_0799	NC_009439.1	908821	909603	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	908821..909603	Pseudomonas mendocina ymp	5108893
YP_001186300.1	CDS	Pmen_0800	NC_009439.1	909607	909885	D	hypothetical protein	909607..909885	Pseudomonas mendocina ymp	5108894
YP_001186301.1	CDS	Pmen_0801	NC_009439.1	910266	911429	D	PFAM: Orn/DAP/Arg decarboxylase 2; ornithine decarboxylase	910266..911429	Pseudomonas mendocina ymp	5108895
YP_001186302.1	CDS	Pmen_0802	NC_009439.1	911717	914011	D	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor	911717..914011	Pseudomonas mendocina ymp	5108896
YP_001186303.1	CDS	Pmen_0803	NC_009439.1	914148	914816	D	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; putative hydroxylase	914148..914816	Pseudomonas mendocina ymp	5108897
YP_001186304.1	CDS	Pmen_0804	NC_009439.1	914842	916011	D	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase	914842..916011	Pseudomonas mendocina ymp	5108898
YP_001186305.1	CDS	Pmen_0805	NC_009439.1	916254	918449	D	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor	916254..918449	Pseudomonas mendocina ymp	5108899
YP_001186306.1	CDS	Pmen_0806	NC_009439.1	918534	920765	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor	complement(918534..920765)	Pseudomonas mendocina ymp	5108900
YP_001186307.1	CDS	Pmen_0807	NC_009439.1	920995	921738	D	PFAM: LamB/YcsF family protein; hypothetical protein	920995..921738	Pseudomonas mendocina ymp	5108901
YP_001186308.1	CDS	Pmen_0808	NC_009439.1	921838	922137	R	hypothetical protein	complement(921838..922137)	Pseudomonas mendocina ymp	5108902
YP_001186309.1	CDS	Pmen_0809	NC_009439.1	922213	922854	R	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; 3-beta hydroxysteroid dehydrogenase/isomerase	complement(922213..922854)	Pseudomonas mendocina ymp	5108903
YP_001186310.1	CDS	Pmen_0810	NC_009439.1	922954	923841	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	922954..923841	Pseudomonas mendocina ymp	5108904
YP_001186311.1	CDS	Pmen_0811	NC_009439.1	923928	924815	D	PFAM: protein of unknown function RIO1; hypothetical protein	923928..924815	Pseudomonas mendocina ymp	5108905
YP_001186312.1	CDS	Pmen_0812	NC_009439.1	924888	925319	R	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; MerR family transcriptional regulator	complement(924888..925319)	Pseudomonas mendocina ymp	5108906
YP_001186313.1	CDS	Pmen_0813	NC_009439.1	925356	925616	R	hypothetical protein	complement(925356..925616)	Pseudomonas mendocina ymp	5108907
YP_001186314.1	CDS	Pmen_0814	NC_009439.1	925713	926057	R	hypothetical protein	complement(925713..926057)	Pseudomonas mendocina ymp	5108908
YP_001186315.1	CDS	Pmen_0815	NC_009439.1	926745	927086	R	hypothetical protein	complement(926745..927086)	Pseudomonas mendocina ymp	5108909
YP_001186316.1	CDS	Pmen_0816	NC_009439.1	927359	929539	R	PFAM: lipase, class 3; lipase, class 3	complement(927359..929539)	Pseudomonas mendocina ymp	5108910
YP_001186317.1	CDS	Pmen_0817	NC_009439.1	929546	930211	R	hypothetical protein	complement(929546..930211)	Pseudomonas mendocina ymp	5108911
YP_001186318.1	CDS	Pmen_0818	NC_009439.1	930286	931029	R	hypothetical protein	complement(930286..931029)	Pseudomonas mendocina ymp	5108912
YP_001186319.1	CDS	Pmen_0819	NC_009439.1	931026	931928	R	hypothetical protein	complement(931026..931928)	Pseudomonas mendocina ymp	5108913
YP_001186320.1	CDS	Pmen_0820	NC_009439.1	931925	934009	R	PFAM: Rhs element Vgr protein; Rhs element Vgr protein	complement(931925..934009)	Pseudomonas mendocina ymp	5108914
YP_001186321.1	CDS	Pmen_0821	NC_009439.1	934143	936515	R	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase	complement(934143..936515)	Pseudomonas mendocina ymp	5108915
YP_001186322.1	CDS	Pmen_0822	NC_009439.1	936580	936969	R	hypothetical protein	complement(936580..936969)	Pseudomonas mendocina ymp	5108916
YP_001186323.1	CDS	Pmen_0823	NC_009439.1	937054	937305	D	PFAM: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein	937054..937305	Pseudomonas mendocina ymp	5108917
YP_001186324.1	CDS	Pmen_0824	NC_009439.1	937355	937975	R	PFAM: regulatory protein, TetR; Tetracycline transcriptional repressor MAATS-type, C-terminal domain protein; TetR family transcriptional regulator	complement(937355..937975)	Pseudomonas mendocina ymp	5108918
YP_001186325.1	CDS	Pmen_0825	NC_009439.1	938114	939265	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	938114..939265	Pseudomonas mendocina ymp	5108919
YP_001186326.1	CDS	Pmen_0826	NC_009439.1	939271	942408	D	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein	939271..942408	Pseudomonas mendocina ymp	5108920
YP_001186327.1	CDS	Pmen_0827	NC_009439.1	942501	943670	D	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter	942501..943670	Pseudomonas mendocina ymp	5108921
YP_001186328.1	CDS	Pmen_0828	NC_009439.1	943680	944540	R	PFAM: protein of unknown function, zinc metallopeptidase putative; hypothetical protein	complement(943680..944540)	Pseudomonas mendocina ymp	5108922
YP_001186329.1	CDS	Pmen_0829	NC_009439.1	944580	945014	R	PFAM: protein of unknown function DUF411; hypothetical protein	complement(944580..945014)	Pseudomonas mendocina ymp	5108923
YP_001186330.1	CDS	Pmen_0830	NC_009439.1	945144	945527	D	hypothetical protein	945144..945527	Pseudomonas mendocina ymp	5108924
YP_001186331.1	CDS	Pmen_0831	NC_009439.1	945566	946654	R	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase	complement(945566..946654)	Pseudomonas mendocina ymp	5108925
YP_001186332.1	CDS	Pmen_0832	NC_009439.1	946713	948005	R	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; xanthine/uracil/vitamin C permease	complement(946713..948005)	Pseudomonas mendocina ymp	5108926
YP_001186333.1	CDS	Pmen_0833	NC_009439.1	948241	948792	D	TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; DJ-1 family protein	948241..948792	Pseudomonas mendocina ymp	5108927
YP_001186334.1	CDS	Pmen_0834	NC_009439.1	948979	950001	R	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase; Ada, metal-binding domain protein; methylguanine DNA methyltransferase, ribonuclease domain protein; DNA-O6-methylguanine--protein-cysteine S-methyltransferase/transcriptional regulator Ada	complement(948979..950001)	Pseudomonas mendocina ymp	5108928
YP_001186335.1	CDS	Pmen_0835	NC_009439.1	950161	953658	D	TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein, family 3; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase	950161..953658	Pseudomonas mendocina ymp	5108929
YP_001186336.1	CDS	Pmen_0836	NC_009439.1	953693	954880	D	PFAM: response regulator receiver; response regulator receiver protein	953693..954880	Pseudomonas mendocina ymp	5108930
YP_001186337.1	CDS	dppF	NC_009439.1	955001	955972	R	Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit	complement(955001..955972)	Pseudomonas mendocina ymp	5108931
YP_001186338.1	CDS	Pmen_0838	NC_009439.1	955972	956946	R	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase	complement(955972..956946)	Pseudomonas mendocina ymp	5108932
YP_001186339.1	CDS	Pmen_0839	NC_009439.1	957049	957951	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(957049..957951)	Pseudomonas mendocina ymp	5108933
YP_001186340.1	CDS	Pmen_0840	NC_009439.1	958051	959061	R	PFAM: binding-protein-dependent transport systems inner membrane component; alkaline phosphatase	complement(958051..959061)	Pseudomonas mendocina ymp	5108934
YP_001186341.1	CDS	Pmen_0841	NC_009439.1	959223	960818	R	PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein	complement(959223..960818)	Pseudomonas mendocina ymp	5108935
YP_001186342.1	CDS	Pmen_0842	NC_009439.1	960993	961559	R	PFAM: helix-turn-helix domain protein; protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; cupin	complement(960993..961559)	Pseudomonas mendocina ymp	5108936
YP_001186343.1	CDS	Pmen_0843	NC_009439.1	961744	962973	D	PFAM: creatinase; peptidase M24; peptidase M24	961744..962973	Pseudomonas mendocina ymp	5108937
YP_001186344.1	CDS	Pmen_0844	NC_009439.1	963018	964613	R	PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein	complement(963018..964613)	Pseudomonas mendocina ymp	5108938
YP_001186345.1	CDS	Pmen_0845	NC_009439.1	964667	966265	R	PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein	complement(964667..966265)	Pseudomonas mendocina ymp	5108939
YP_001186346.1	CDS	Pmen_0846	NC_009439.1	966491	967204	R	PFAM: protein of unknown function DUF541; hypothetical protein	complement(966491..967204)	Pseudomonas mendocina ymp	5108940
YP_001186347.1	CDS	Pmen_0847	NC_009439.1	967404	968657	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	967404..968657	Pseudomonas mendocina ymp	5108941
YP_001186348.1	CDS	Pmen_0848	NC_009439.1	968673	969233	D	PFAM: response regulator receiver; helix-turn-helix, Fis-type; two component Fis family transcriptional regulator	968673..969233	Pseudomonas mendocina ymp	5108942
YP_001186349.1	CDS	Pmen_0849	NC_009439.1	969399	970340	D	PFAM: Auxin Efflux Carrier; auxin efflux carrier	969399..970340	Pseudomonas mendocina ymp	5108943
YP_001186350.1	CDS	Pmen_0850	NC_009439.1	970414	970797	R	PFAM: Carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase	complement(970414..970797)	Pseudomonas mendocina ymp	5108944
YP_001186351.1	CDS	Pmen_0851	NC_009439.1	970800	971894	R	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; CaCA family Na(+)/Ca(+) antiporter	complement(970800..971894)	Pseudomonas mendocina ymp	5108945
YP_001186352.1	CDS	Pmen_0852	NC_009439.1	971986	972408	R	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; rare lipoprotein A	complement(971986..972408)	Pseudomonas mendocina ymp	5108946
YP_001186353.1	CDS	gatB	NC_009439.1	972478	973923	R	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B	complement(972478..973923)	Pseudomonas mendocina ymp	5108947
YP_001186354.1	CDS	gatA	NC_009439.1	973935	975386	R	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A	complement(973935..975386)	Pseudomonas mendocina ymp	5108948
YP_001186355.1	CDS	gatC	NC_009439.1	975402	975689	R	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C	complement(975402..975689)	Pseudomonas mendocina ymp	5108949
YP_001186356.1	CDS	Pmen_0856	NC_009439.1	975927	976964	D	functions in MreBCD complex in some organisms; rod shape-determining protein MreB	975927..976964	Pseudomonas mendocina ymp	5108950
YP_001186357.1	CDS	Pmen_0857	NC_009439.1	977097	978083	D	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC	977097..978083	Pseudomonas mendocina ymp	5108951
YP_001186358.1	CDS	Pmen_0858	NC_009439.1	978083	978571	D	PFAM: Rod shape-determining protein MreD; rod shape-determining protein MreD	978083..978571	Pseudomonas mendocina ymp	5108952
YP_001186359.1	CDS	Pmen_0859	NC_009439.1	978621	979217	D	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein	978621..979217	Pseudomonas mendocina ymp	5108953
YP_001186360.1	CDS	Pmen_0860	NC_009439.1	979318	980775	D	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; RNAse G	979318..980775	Pseudomonas mendocina ymp	5108954
YP_001186361.1	CDS	Pmen_0861	NC_009439.1	980793	984614	D	hypothetical protein	980793..984614	Pseudomonas mendocina ymp	5108955
YP_001186362.1	CDS	Pmen_0862	NC_009439.1	984652	985512	D	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	984652..985512	Pseudomonas mendocina ymp	5108956
YP_001186363.1	CDS	Pmen_0863	NC_009439.1	985515	986957	D	PFAM: peptidase U62, modulator of DNA gyrase; C69 family peptidase	985515..986957	Pseudomonas mendocina ymp	5108957
YP_001186364.1	CDS	Pmen_0864	NC_009439.1	987031	987549	R	PFAM: protein of unknown function DUF615; hypothetical protein	complement(987031..987549)	Pseudomonas mendocina ymp	5108958
YP_001186365.1	CDS	Pmen_0865	NC_009439.1	987666	989012	D	PFAM: peptidase U62, modulator of DNA gyrase; C69 family peptidase	987666..989012	Pseudomonas mendocina ymp	5108959
YP_001186366.1	CDS	Pmen_0866	NC_009439.1	989067	989339	R	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; phosphotransferase system, phosphocarrier protein HPr	complement(989067..989339)	Pseudomonas mendocina ymp	5108960
YP_001186367.1	CDS	Pmen_0867	NC_009439.1	989354	990211	R	PFAM: uncharacterised P-loop ATPase protein UPF0042; hypothetical protein	complement(989354..990211)	Pseudomonas mendocina ymp	5108961
YP_001186368.1	CDS	Pmen_0868	NC_009439.1	990214	990678	R	TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN	complement(990214..990678)	Pseudomonas mendocina ymp	5108962
YP_001186369.1	CDS	Pmen_0869	NC_009439.1	990691	990999	R	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; 30S ribosomal protein S30	complement(990691..990999)	Pseudomonas mendocina ymp	5108963
YP_001186370.1	CDS	Pmen_0870	NC_009439.1	991098	992591	R	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54	complement(991098..992591)	Pseudomonas mendocina ymp	5108964
YP_001186371.1	CDS	Pmen_0871	NC_009439.1	992728	993453	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(992728..993453)	Pseudomonas mendocina ymp	5108965
YP_001186372.1	CDS	Pmen_0872	NC_009439.1	993453	993998	R	PFAM: OstA family protein; OstA family protein	complement(993453..993998)	Pseudomonas mendocina ymp	5108966
YP_001186373.1	CDS	Pmen_0873	NC_009439.1	993985	994551	R	PFAM: protein of unknown function DUF1239; hypothetical protein	complement(993985..994551)	Pseudomonas mendocina ymp	5108967
YP_001186374.1	CDS	Pmen_0874	NC_009439.1	994560	995081	R	TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	complement(994560..995081)	Pseudomonas mendocina ymp	5108968
YP_001186375.1	CDS	Pmen_0875	NC_009439.1	995081	996055	R	TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein	complement(995081..996055)	Pseudomonas mendocina ymp	5108969
YP_001186376.1	CDS	Pmen_0876	NC_009439.1	996301	997110	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	996301..997110	Pseudomonas mendocina ymp	5108970
YP_001186377.1	CDS	Pmen_0877	NC_009439.1	997110	997907	D	PFAM: protein of unknown function DUF140; hypothetical protein	997110..997907	Pseudomonas mendocina ymp	5108971
YP_001186378.1	CDS	Pmen_0878	NC_009439.1	997907	998377	D	PFAM: Mammalian cell entry related domain protein; hypothetical protein	997907..998377	Pseudomonas mendocina ymp	5108972
YP_001186379.1	CDS	Pmen_0879	NC_009439.1	998392	999021	D	PFAM: toluene tolerance family protein; toluene tolerance family protein	998392..999021	Pseudomonas mendocina ymp	5108973
YP_001186380.1	CDS	Pmen_0880	NC_009439.1	999018	999323	D	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist	999018..999323	Pseudomonas mendocina ymp	5108974
YP_001186381.1	CDS	Pmen_0881	NC_009439.1	999448	999687	D	PFAM: BolA family protein; BolA family protein	999448..999687	Pseudomonas mendocina ymp	5108975
YP_001186382.1	CDS	Pmen_0882	NC_009439.1	999710	1000975	D	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	999710..1000975	Pseudomonas mendocina ymp	5108976
YP_001186383.1	CDS	hisG	NC_009439.1	1001039	1001674	D	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit	1001039..1001674	Pseudomonas mendocina ymp	5108977
YP_001186384.1	CDS	hisD	NC_009439.1	1001798	1003108	D	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase	1001798..1003108	Pseudomonas mendocina ymp	5108978
YP_001186385.1	CDS	Pmen_0885	NC_009439.1	1003239	1004291	D	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase	1003239..1004291	Pseudomonas mendocina ymp	5108743
YP_001186386.1	CDS	Pmen_0886	NC_009439.1	1004361	1005080	R	hypothetical protein	complement(1004361..1005080)	Pseudomonas mendocina ymp	5108744
YP_001186387.1	CDS	Pmen_0887	NC_009439.1	1005094	1007172	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor	complement(1005094..1007172)	Pseudomonas mendocina ymp	5108745
YP_001186388.1	CDS	Pmen_0888	NC_009439.1	1007259	1008401	R	PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; 2-alkenal reductase	complement(1007259..1008401)	Pseudomonas mendocina ymp	5108746
YP_001186389.1	CDS	Pmen_0889	NC_009439.1	1008513	1009271	D	PFAM: protein of unknown function DUF34; hypothetical protein	1008513..1009271	Pseudomonas mendocina ymp	5108747
YP_001186390.1	CDS	Pmen_0890	NC_009439.1	1009404	1010321	D	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2	1009404..1010321	Pseudomonas mendocina ymp	5108748
YP_001186391.1	CDS	Pmen_0891	NC_009439.1	1010334	1012229	D	in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase	1010334..1012229	Pseudomonas mendocina ymp	5108749
YP_001186392.1	CDS	Pmen_0892	NC_009439.1	1012360	1012791	R	PFAM: protein of unknown function DUF1043; hypothetical protein	complement(1012360..1012791)	Pseudomonas mendocina ymp	5108750
YP_001186393.1	CDS	Pmen_0893	NC_009439.1	1012920	1013552	D	alpha/beta fold family hydrolase-like protein	1012920..1013552	Pseudomonas mendocina ymp	5108751
YP_001186394.1	CDS	Pmen_0894	NC_009439.1	1013687	1015033	D	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase	1013687..1015033	Pseudomonas mendocina ymp	5108752
YP_001186395.1	CDS	Pmen_0895	NC_009439.1	1015132	1016226	D	PFAM: AFG1-family ATPase; AFG1 family ATPase	1015132..1016226	Pseudomonas mendocina ymp	5108753
YP_001186396.1	CDS	Pmen_0896	NC_009439.1	1016386	1017348	R	hypothetical protein	complement(1016386..1017348)	Pseudomonas mendocina ymp	5108754
YP_001186397.1	CDS	Pmen_0897	NC_009439.1	1017477	1018484	R	PFAM: helix-turn-helix- domain containing protein, AraC type; transcriptional regulator	complement(1017477..1018484)	Pseudomonas mendocina ymp	5108755
YP_001186398.1	CDS	Pmen_0898	NC_009439.1	1018627	1019766	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	1018627..1019766	Pseudomonas mendocina ymp	5108756
YP_001186399.1	CDS	Pmen_0899	NC_009439.1	1019838	1020551	D	PFAM: Endonuclease V; endonuclease V	1019838..1020551	Pseudomonas mendocina ymp	5108757
YP_001186400.1	CDS	Pmen_0900	NC_009439.1	1020548	1021585	R	PFAM: aldo/keto reductase; aldo/keto reductase	complement(1020548..1021585)	Pseudomonas mendocina ymp	5108758
YP_001186401.1	CDS	rplM	NC_009439.1	1021834	1022262	D	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13	1021834..1022262	Pseudomonas mendocina ymp	5108759
YP_001186402.1	CDS	rpsI	NC_009439.1	1022277	1022669	D	forms a direct contact with the tRNA during translation; 30S ribosomal protein S9	1022277..1022669	Pseudomonas mendocina ymp	5108760
YP_001186403.1	CDS	Pmen_0903	NC_009439.1	1022923	1023516	D	TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit	1022923..1023516	Pseudomonas mendocina ymp	5108761
YP_001186404.1	CDS	Pmen_0904	NC_009439.1	1023516	1024727	D	PFAM: Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; cytochrome b/b6 domain-containing protein	1023516..1024727	Pseudomonas mendocina ymp	5108762
YP_001186405.1	CDS	Pmen_0905	NC_009439.1	1024727	1025506	D	cytochrome c1-like protein	1024727..1025506	Pseudomonas mendocina ymp	5108763
YP_001186406.1	CDS	Pmen_0906	NC_009439.1	1025671	1026288	D	PFAM: Glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein	1025671..1026288	Pseudomonas mendocina ymp	5108764
YP_001186407.1	CDS	Pmen_0907	NC_009439.1	1026303	1026716	D	PFAM: Stringent starvation protein B; ClpXP protease specificity-enhancing factor	1026303..1026716	Pseudomonas mendocina ymp	5108765
YP_001186408.1	CDS	Pmen_0908	NC_009439.1	1026797	1027330	R	PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; transport-associated	complement(1026797..1027330)	Pseudomonas mendocina ymp	5108766
YP_001186409.1	CDS	gmhA	NC_009439.1	1027327	1027920	R	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase	complement(1027327..1027920)	Pseudomonas mendocina ymp	5108767
YP_001186410.1	CDS	Pmen_0910	NC_009439.1	1027946	1028305	R	PFAM: protein of unknown function UPF0102; hypothetical protein	complement(1027946..1028305)	Pseudomonas mendocina ymp	5108768
YP_001186411.1	CDS	Pmen_0911	NC_009439.1	1028302	1030110	R	PFAM: LppC family lipoprotein; LppC family lipoprotein	complement(1028302..1030110)	Pseudomonas mendocina ymp	5108769
YP_001186412.1	CDS	Pmen_0912	NC_009439.1	1030200	1031099	D	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase	1030200..1031099	Pseudomonas mendocina ymp	5108770
YP_001186413.1	CDS	Pmen_0913	NC_009439.1	1031884	1032339	D	MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ	1031884..1032339	Pseudomonas mendocina ymp	5106945
YP_001186414.1	CDS	mraW	NC_009439.1	1032342	1033286	D	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW	1032342..1033286	Pseudomonas mendocina ymp	5108772
YP_001186415.1	CDS	Pmen_0915	NC_009439.1	1033283	1033576	D	PFAM: cell division protein FtsL; cell division protein FtsL	1033283..1033576	Pseudomonas mendocina ymp	5108773
YP_001186416.1	CDS	Pmen_0916	NC_009439.1	1033573	1035300	D	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan synthetase FtsI	1033573..1035300	Pseudomonas mendocina ymp	5108774
YP_001186417.1	CDS	murE	NC_009439.1	1035300	1036763	D	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase	1035300..1036763	Pseudomonas mendocina ymp	5108775
YP_001186418.1	CDS	Pmen_0918	NC_009439.1	1036756	1038126	D	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	1036756..1038126	Pseudomonas mendocina ymp	5108776
YP_001186419.1	CDS	mraY	NC_009439.1	1038127	1039209	D	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase	1038127..1039209	Pseudomonas mendocina ymp	5108777
YP_001186420.1	CDS	murD	NC_009439.1	1039216	1040562	D	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase	1039216..1040562	Pseudomonas mendocina ymp	5108778
YP_001186421.1	CDS	Pmen_0921	NC_009439.1	1040562	1041770	D	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; cell division protein FtsW	1040562..1041770	Pseudomonas mendocina ymp	5108779
YP_001186422.1	CDS	murG	NC_009439.1	1041760	1042830	D	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	1041760..1042830	Pseudomonas mendocina ymp	5108780
YP_001186423.1	CDS	murC	NC_009439.1	1042823	1044265	D	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase	1042823..1044265	Pseudomonas mendocina ymp	5108781
YP_001186424.1	CDS	ddl	NC_009439.1	1044262	1045203	D	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase	1044262..1045203	Pseudomonas mendocina ymp	5108782
YP_001186425.1	CDS	Pmen_0925	NC_009439.1	1045207	1046073	D	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein	1045207..1046073	Pseudomonas mendocina ymp	5108783
YP_001186426.1	CDS	Pmen_0926	NC_009439.1	1046089	1047336	D	PFAM: cell division protein FtsA; cell division protein FtsA	1046089..1047336	Pseudomonas mendocina ymp	5108784
YP_001186427.1	CDS	Pmen_0927	NC_009439.1	1047379	1048572	D	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ	1047379..1048572	Pseudomonas mendocina ymp	5108785
YP_001186428.1	CDS	lpxC	NC_009439.1	1048684	1049595	D	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	1048684..1049595	Pseudomonas mendocina ymp	5108786
YP_001186429.1	CDS	Pmen_0929	NC_009439.1	1049730	1050185	R	hypothetical protein	complement(1049730..1050185)	Pseudomonas mendocina ymp	5108787
YP_001186430.1	CDS	Pmen_0930	NC_009439.1	1050264	1051184	D	PFAM: peptidase M23B; peptidase M23B	1050264..1051184	Pseudomonas mendocina ymp	5108788
YP_001186431.1	CDS	secA	NC_009439.1	1051339	1054158	D	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA	1051339..1054158	Pseudomonas mendocina ymp	5108789
YP_001186432.1	CDS	argJ	NC_009439.1	1054310	1055527	D	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase	1054310..1055527	Pseudomonas mendocina ymp	5108790
YP_001186433.1	CDS	Pmen_0933	NC_009439.1	1055658	1056290	D	PFAM: Glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein	1055658..1056290	Pseudomonas mendocina ymp	5108791
YP_001186434.1	CDS	Pmen_0934	NC_009439.1	1056287	1057228	D	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; thiamine monophosphate synthase; hypothetical protein	1056287..1057228	Pseudomonas mendocina ymp	5108792
YP_001186435.1	CDS	Pmen_0935	NC_009439.1	1057288	1057863	R	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; ATP:cob(I)alamin adenosyltransferase	complement(1057288..1057863)	Pseudomonas mendocina ymp	5108793
YP_001186436.1	CDS	Pmen_0936	NC_009439.1	1057867	1059882	R	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase	complement(1057867..1059882)	Pseudomonas mendocina ymp	5108794
YP_001186437.1	CDS	Pmen_0937	NC_009439.1	1059989	1060900	R	catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase	complement(1059989..1060900)	Pseudomonas mendocina ymp	5108795
YP_001186438.1	CDS	Pmen_0938	NC_009439.1	1060897	1061859	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase	complement(1060897..1061859)	Pseudomonas mendocina ymp	5108796
YP_001186439.1	CDS	Pmen_0939	NC_009439.1	1061998	1062477	D	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein	1061998..1062477	Pseudomonas mendocina ymp	5108797
YP_001186440.1	CDS	Pmen_0940	NC_009439.1	1062581	1063408	D	PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS	1062581..1063408	Pseudomonas mendocina ymp	5108798
YP_001186441.1	CDS	Pmen_0941	NC_009439.1	1063463	1065259	R	hypothetical protein	complement(1063463..1065259)	Pseudomonas mendocina ymp	5108799
YP_001186442.1	CDS	Pmen_0942	NC_009439.1	1065303	1065677	R	PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase	complement(1065303..1065677)	Pseudomonas mendocina ymp	5108800
YP_001186443.1	CDS	Pmen_0943	NC_009439.1	1065694	1066686	D	hypothetical protein	1065694..1066686	Pseudomonas mendocina ymp	5108801
YP_001186444.1	CDS	Pmen_0944	NC_009439.1	1066837	1067850	D	hypothetical protein	1066837..1067850	Pseudomonas mendocina ymp	5108802
YP_001186445.1	CDS	Pmen_0945	NC_009439.1	1067918	1069180	R	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease	complement(1067918..1069180)	Pseudomonas mendocina ymp	5108803
YP_001186446.1	CDS	upp	NC_009439.1	1069183	1069821	R	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase	complement(1069183..1069821)	Pseudomonas mendocina ymp	5108804
YP_001186447.1	CDS	Pmen_0947	NC_009439.1	1070056	1070613	D	Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase	1070056..1070613	Pseudomonas mendocina ymp	5108805
YP_001186448.1	CDS	Pmen_0948	NC_009439.1	1070686	1072425	R	putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; putative sulfate transporter YchM	complement(1070686..1072425)	Pseudomonas mendocina ymp	5108806
YP_001186449.1	CDS	Pmen_0949	NC_009439.1	1072598	1072885	D	hypothetical protein	1072598..1072885	Pseudomonas mendocina ymp	5108807
YP_001186450.1	CDS	rpsT	NC_009439.1	1073014	1073292	R	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20	complement(1073014..1073292)	Pseudomonas mendocina ymp	5108808
YP_001186451.1	CDS	Pmen_0951	NC_009439.1	1073484	1075025	D	TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN	1073484..1075025	Pseudomonas mendocina ymp	5108809
YP_001186452.1	CDS	Pmen_0952	NC_009439.1	1075170	1076120	D	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase	1075170..1076120	Pseudomonas mendocina ymp	5108810
YP_001186453.1	CDS	ileS	NC_009439.1	1076117	1078948	D	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase	1076117..1078948	Pseudomonas mendocina ymp	5108811
YP_001186454.1	CDS	lspA	NC_009439.1	1078941	1079450	D	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase	1078941..1079450	Pseudomonas mendocina ymp	5108812
YP_001186455.1	CDS	Pmen_0955	NC_009439.1	1079447	1079884	D	PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase	1079447..1079884	Pseudomonas mendocina ymp	5108813
YP_001186456.1	CDS	ispH	NC_009439.1	1080023	1080967	D	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	1080023..1080967	Pseudomonas mendocina ymp	5108814
YP_001186457.1	CDS	Pmen_0957	NC_009439.1	1081090	1081515	R	Tfp pilus assembly protein PilE-like protein	complement(1081090..1081515)	Pseudomonas mendocina ymp	5108815
YP_001186458.1	CDS	Pmen_0958	NC_009439.1	1081518	1085201	R	Tfp pilus assembly protein tip-associated adhesin PilY1-like protein	complement(1081518..1085201)	Pseudomonas mendocina ymp	5108816
YP_001186459.1	CDS	Pmen_0959	NC_009439.1	1085213	1085860	R	Tfp pilus assembly protein PilX-like protein	complement(1085213..1085860)	Pseudomonas mendocina ymp	5108817
YP_001186460.1	CDS	Pmen_0960	NC_009439.1	1085857	1086705	R	Tfp pilus assembly protein PilW-like protein	complement(1085857..1086705)	Pseudomonas mendocina ymp	5108818
YP_001186461.1	CDS	Pmen_0961	NC_009439.1	1086702	1087262	R	TIGRFAM: type IV pilus modification protein PilV; type IV pilus modification protein PilV	complement(1086702..1087262)	Pseudomonas mendocina ymp	5108819
YP_001186462.1	CDS	Pmen_0962	NC_009439.1	1087271	1087759	R	Tfp pilus assembly protein FimT-like protein	complement(1087271..1087759)	Pseudomonas mendocina ymp	5108820
YP_001186463.1	CDS	Pmen_0963	NC_009439.1	1087901	1088410	R	Tfp pilus assembly protein FimT-like protein	complement(1087901..1088410)	Pseudomonas mendocina ymp	5108821
YP_001186464.1	CDS	Pmen_0964	NC_009439.1	1088508	1089593	D	TIGRFAM: glycine oxidase ThiO; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; glycine oxidase ThiO	1088508..1089593	Pseudomonas mendocina ymp	5108586
YP_001186465.1	CDS	Pmen_0965	NC_009439.1	1089656	1090996	R	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two-component response regulator PilR	complement(1089656..1090996)	Pseudomonas mendocina ymp	5108587
YP_001186466.1	CDS	Pmen_0966	NC_009439.1	1090999	1092591	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; sensor protein PilS	complement(1090999..1092591)	Pseudomonas mendocina ymp	5108588
YP_001186467.1	CDS	Pmen_0967	NC_009439.1	1092581	1092823	R	hypothetical protein	complement(1092581..1092823)	Pseudomonas mendocina ymp	5108589
YP_001186468.1	CDS	Pmen_0968	NC_009439.1	1093035	1094027	R	DNA uptake lipoprotein-like protein	complement(1093035..1094027)	Pseudomonas mendocina ymp	5108590
YP_001186469.1	CDS	Pmen_0969	NC_009439.1	1094369	1095343	D	TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase D	1094369..1095343	Pseudomonas mendocina ymp	5108591
YP_001186470.1	CDS	Pmen_0970	NC_009439.1	1095340	1096071	D	PFAM: protein of unknown function DUF152; hypothetical protein	1095340..1096071	Pseudomonas mendocina ymp	5108592
YP_001186471.1	CDS	Pmen_0971	NC_009439.1	1096193	1096795	D	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	1096193..1096795	Pseudomonas mendocina ymp	5108593
YP_001186472.1	CDS	Pmen_0972	NC_009439.1	1096822	1097931	D	PFAM: NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase	1096822..1097931	Pseudomonas mendocina ymp	5108594
YP_001186473.1	CDS	Pmen_0973	NC_009439.1	1097978	1098379	D	hypothetical protein	1097978..1098379	Pseudomonas mendocina ymp	5108595
YP_001186474.1	CDS	Pmen_0974	NC_009439.1	1098433	1099635	R	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	complement(1098433..1099635)	Pseudomonas mendocina ymp	5108596
YP_001186475.1	CDS	Pmen_0975	NC_009439.1	1099807	1100916	D	hypothetical protein	1099807..1100916	Pseudomonas mendocina ymp	5108597
YP_001186476.1	CDS	Pmen_0976	NC_009439.1	1100913	1101653	R	putative role in sulfur assimilation; putative sulfate transport protein CysZ	complement(1100913..1101653)	Pseudomonas mendocina ymp	5108598
YP_001186477.1	CDS	Pmen_0977	NC_009439.1	1101725	1103698	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; CHASE4 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase	complement(1101725..1103698)	Pseudomonas mendocina ymp	5108599
YP_001186478.1	CDS	Pmen_0978	NC_009439.1	1103939	1104886	D	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase	1103939..1104886	Pseudomonas mendocina ymp	5108600
YP_001186479.1	CDS	Pmen_0979	NC_009439.1	1104961	1107792	R	hypothetical protein	complement(1104961..1107792)	Pseudomonas mendocina ymp	5108601
YP_001186480.1	CDS	Pmen_0980	NC_009439.1	1107789	1108481	R	hypothetical protein	complement(1107789..1108481)	Pseudomonas mendocina ymp	5108602
YP_001186481.1	CDS	Pmen_0981	NC_009439.1	1108566	1109807	R	hypothetical protein	complement(1108566..1109807)	Pseudomonas mendocina ymp	5108603
YP_001186482.1	CDS	Pmen_0982	NC_009439.1	1110033	1110638	D	hypothetical protein	1110033..1110638	Pseudomonas mendocina ymp	5108604
YP_001186483.1	CDS	Pmen_0983	NC_009439.1	1110830	1111858	D	hypothetical protein	1110830..1111858	Pseudomonas mendocina ymp	5108605
YP_001186484.1	CDS	Pmen_0984	NC_009439.1	1111861	1112922	D	hypothetical protein	1111861..1112922	Pseudomonas mendocina ymp	5108606
YP_001186485.1	CDS	Pmen_0985	NC_009439.1	1112909	1113499	D	hypothetical protein	1112909..1113499	Pseudomonas mendocina ymp	5108607
YP_001186486.1	CDS	Pmen_0986	NC_009439.1	1113511	1115838	D	hypothetical protein	1113511..1115838	Pseudomonas mendocina ymp	5108608
YP_001186487.1	CDS	Pmen_0987	NC_009439.1	1116078	1117175	D	TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; carboxynorspermidine decarboxylase	1116078..1117175	Pseudomonas mendocina ymp	5108609
YP_001186488.1	CDS	Pmen_0988	NC_009439.1	1117303	1118544	D	PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase	1117303..1118544	Pseudomonas mendocina ymp	5108610
YP_001186489.1	CDS	Pmen_0989	NC_009439.1	1118765	1120312	D	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase	1118765..1120312	Pseudomonas mendocina ymp	5108611
YP_001186490.1	CDS	Pmen_0990	NC_009439.1	1120309	1121088	D	hypothetical protein	1120309..1121088	Pseudomonas mendocina ymp	5108612
YP_001186491.1	CDS	Pmen_0991	NC_009439.1	1121243	1121695	D	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; 30S ribosomal protein S18P alanine acetyltransferase	1121243..1121695	Pseudomonas mendocina ymp	5108613
YP_001186492.1	CDS	Pmen_0992	NC_009439.1	1121786	1122103	R	PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein	complement(1121786..1122103)	Pseudomonas mendocina ymp	5108614
YP_001186493.1	CDS	Pmen_0993	NC_009439.1	1122531	1123430	D	PFAM: periplasmic binding protein; periplasmic binding protein	1122531..1123430	Pseudomonas mendocina ymp	5108615
YP_001186494.1	CDS	Pmen_0994	NC_009439.1	1123427	1124467	D	PFAM: transport system permease protein; transport system permease	1123427..1124467	Pseudomonas mendocina ymp	5108616
YP_001186495.1	CDS	hmuV	NC_009439.1	1124467	1125234	D	with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit	1124467..1125234	Pseudomonas mendocina ymp	5108617
YP_001186496.1	CDS	Pmen_0996	NC_009439.1	1125250	1126134	D	PFAM: protein of unknown function DUF399; hypothetical protein	1125250..1126134	Pseudomonas mendocina ymp	5108618
YP_001186497.1	CDS	Pmen_0997	NC_009439.1	1126194	1126601	D	hypothetical protein	1126194..1126601	Pseudomonas mendocina ymp	5108619
YP_001186498.1	CDS	Pmen_0998	NC_009439.1	1126863	1127660	R	PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein	complement(1126863..1127660)	Pseudomonas mendocina ymp	5108620
YP_001186499.1	CDS	Pmen_0999	NC_009439.1	1127766	1128038	R	PFAM: TfoX, C-terminal domain protein; TfoX domain-containing protein	complement(1127766..1128038)	Pseudomonas mendocina ymp	5108621
YP_001186500.1	CDS	Pmen_1000	NC_009439.1	1128120	1128476	R	PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein	complement(1128120..1128476)	Pseudomonas mendocina ymp	5108622
YP_001186501.1	CDS	Pmen_1001	NC_009439.1	1128552	1130207	R	hypothetical protein	complement(1128552..1130207)	Pseudomonas mendocina ymp	5108623
YP_001186502.1	CDS	Pmen_1002	NC_009439.1	1130230	1132548	D	TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; penicillin-binding protein 1B	1130230..1132548	Pseudomonas mendocina ymp	5108624
YP_001186503.1	CDS	Pmen_1003	NC_009439.1	1132616	1133296	D	PFAM: Tetratricopeptide TPR_4; hypothetical protein	1132616..1133296	Pseudomonas mendocina ymp	5108625
YP_001186504.1	CDS	Pmen_1004	NC_009439.1	1133296	1133625	D	PFAM: protein of unknown function DUF446; hypothetical protein	1133296..1133625	Pseudomonas mendocina ymp	5108626
YP_001186505.1	CDS	Pmen_1005	NC_009439.1	1133638	1134072	R	hypothetical protein	complement(1133638..1134072)	Pseudomonas mendocina ymp	5108627
YP_001186506.1	CDS	Pmen_1006	NC_009439.1	1134473	1136197	D	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; acetolactate synthase 3 catalytic subunit	1134473..1136197	Pseudomonas mendocina ymp	5108628
YP_001186507.1	CDS	ilvH	NC_009439.1	1136199	1136690	D	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit	1136199..1136690	Pseudomonas mendocina ymp	5108629
YP_001186508.1	CDS	Pmen_1008	NC_009439.1	1136745	1137626	R	participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY	complement(1136745..1137626)	Pseudomonas mendocina ymp	5108630
YP_001186509.1	CDS	Pmen_1009	NC_009439.1	1137752	1138768	D	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase	1137752..1138768	Pseudomonas mendocina ymp	5108631
YP_001186510.1	CDS	Pmen_1010	NC_009439.1	1138916	1139731	D	TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase	1138916..1139731	Pseudomonas mendocina ymp	5108632
YP_001186511.1	CDS	Pmen_1011	NC_009439.1	1139798	1140808	D	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY	1139798..1140808	Pseudomonas mendocina ymp	5108633
YP_001186512.1	CDS	Pmen_1012	NC_009439.1	1140808	1141434	D	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ	1140808..1141434	Pseudomonas mendocina ymp	5108634
YP_001186513.1	CDS	Pmen_1013	NC_009439.1	1147388	1148047	D	PFAM: Paraquat-inducible protein A; paraquat-inducible protein A	1147388..1148047	Pseudomonas mendocina ymp	5106552
YP_001186514.1	CDS	Pmen_1014	NC_009439.1	1148034	1148651	D	PFAM: Paraquat-inducible protein A; paraquat-inducible protein A	1148034..1148651	Pseudomonas mendocina ymp	5108636
YP_001186515.1	CDS	Pmen_1015	NC_009439.1	1148644	1150947	D	PFAM: Mammalian cell entry related domain protein; hypothetical protein	1148644..1150947	Pseudomonas mendocina ymp	5108637
YP_001186516.1	CDS	Pmen_1016	NC_009439.1	1151048	1152208	R	PFAM: SMC domain protein; SMC domain-containing protein	complement(1151048..1152208)	Pseudomonas mendocina ymp	5108638
YP_001186517.1	CDS	Pmen_1017	NC_009439.1	1152233	1152601	R	hypothetical protein	complement(1152233..1152601)	Pseudomonas mendocina ymp	5108639
YP_001186518.1	CDS	Pmen_1018	NC_009439.1	1152598	1153494	R	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase	complement(1152598..1153494)	Pseudomonas mendocina ymp	5108640
YP_001186519.1	CDS	Pmen_1019	NC_009439.1	1153519	1153983	R	hypothetical protein	complement(1153519..1153983)	Pseudomonas mendocina ymp	5108641
YP_001186520.1	CDS	Pmen_1020	NC_009439.1	1154161	1155597	R	TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase	complement(1154161..1155597)	Pseudomonas mendocina ymp	5108642
YP_001186521.1	CDS	Pmen_1021	NC_009439.1	1155692	1156339	R	hypothetical protein	complement(1155692..1156339)	Pseudomonas mendocina ymp	5108643
YP_001186522.1	CDS	Pmen_1022	NC_009439.1	1156377	1157510	R	hypothetical protein	complement(1156377..1157510)	Pseudomonas mendocina ymp	5108644
YP_001186523.1	CDS	Pmen_1023	NC_009439.1	1157524	1158975	R	PFAM: membrane bound O-acyl transferase, MBOAT family protein; membrane bound O-acyl transferase, MBOAT family protein	complement(1157524..1158975)	Pseudomonas mendocina ymp	5108645
YP_001186524.1	CDS	algL	NC_009439.1	1159160	1160236	R	Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export; poly(beta-D-mannuronate) lyase	complement(1159160..1160236)	Pseudomonas mendocina ymp	5108646
YP_001186525.1	CDS	Pmen_1025	NC_009439.1	1160247	1161677	R	hypothetical protein	complement(1160247..1161677)	Pseudomonas mendocina ymp	5108647
YP_001186526.1	CDS	Pmen_1026	NC_009439.1	1161689	1163224	R	SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; carbohydrate-binding and sugar hydrolysis protein	complement(1161689..1163224)	Pseudomonas mendocina ymp	5108648
YP_001186527.1	CDS	Pmen_1027	NC_009439.1	1163236	1164693	R	hypothetical protein	complement(1163236..1164693)	Pseudomonas mendocina ymp	5108649
YP_001186528.1	CDS	Pmen_1028	NC_009439.1	1164690	1166066	R	PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein	complement(1164690..1166066)	Pseudomonas mendocina ymp	5108650
YP_001186529.1	CDS	Pmen_1029	NC_009439.1	1166077	1167240	R	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	complement(1166077..1167240)	Pseudomonas mendocina ymp	5108651
YP_001186530.1	CDS	Pmen_1030	NC_009439.1	1167267	1168748	R	hypothetical protein	complement(1167267..1168748)	Pseudomonas mendocina ymp	5108652
YP_001186531.1	CDS	Pmen_1031	NC_009439.1	1168797	1170107	R	PFAM: UDP-glucose/GDP-mannose dehydrogenase; GDP-mannose 6-dehydrogenase	complement(1168797..1170107)	Pseudomonas mendocina ymp	5108653
YP_001186532.1	CDS	Pmen_1032	NC_009439.1	1170805	1171584	R	PFAM: protein of unknown function DUF328; hypothetical protein	complement(1170805..1171584)	Pseudomonas mendocina ymp	5108654
YP_001186533.1	CDS	Pmen_1033	NC_009439.1	1172007	1173398	D	PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; PhoH family protein	1172007..1173398	Pseudomonas mendocina ymp	5108655
YP_001186534.1	CDS	moaC	NC_009439.1	1173563	1174039	D	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC	1173563..1174039	Pseudomonas mendocina ymp	5108656
YP_001186535.1	CDS	Pmen_1035	NC_009439.1	1174036	1174278	D	TIGRFAM: MoaD family protein; PFAM: thiamineS protein; molybdopterin synthase subunit MoaD	1174036..1174278	Pseudomonas mendocina ymp	5108657
YP_001186536.1	CDS	Pmen_1036	NC_009439.1	1174432	1174884	D	PFAM: molybdopterin biosynthesis MoaE protein; molybdopterin synthase subunit MoaE	1174432..1174884	Pseudomonas mendocina ymp	5108658
YP_001186537.1	CDS	Pmen_1037	NC_009439.1	1175042	1175206	R	hypothetical protein	complement(1175042..1175206)	Pseudomonas mendocina ymp	5108659
YP_001186538.1	CDS	Pmen_1038	NC_009439.1	1175380	1177296	D	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; metallophosphoesterase	1175380..1177296	Pseudomonas mendocina ymp	5108660
YP_001186539.1	CDS	Pmen_1039	NC_009439.1	1177587	1178498	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	1177587..1178498	Pseudomonas mendocina ymp	5108661
YP_001186540.1	CDS	Pmen_1040	NC_009439.1	1178600	1179178	D	hypothetical protein	1178600..1179178	Pseudomonas mendocina ymp	5108662
YP_001186541.1	CDS	Pmen_1041	NC_009439.1	1179187	1179633	R	hypothetical protein	complement(1179187..1179633)	Pseudomonas mendocina ymp	5108663
YP_001186542.1	CDS	Pmen_1042	NC_009439.1	1179660	1179824	R	hypothetical protein	complement(1179660..1179824)	Pseudomonas mendocina ymp	5107702
YP_001186543.1	CDS	Pmen_1043	NC_009439.1	1179846	1180316	D	hypothetical protein	1179846..1180316	Pseudomonas mendocina ymp	5107703
YP_001186544.1	CDS	Pmen_1044	NC_009439.1	1180313	1180540	R	hypothetical protein	complement(1180313..1180540)	Pseudomonas mendocina ymp	5107704
YP_001186545.1	CDS	Pmen_1045	NC_009439.1	1180935	1181354	R	PFAM: PilT protein domain protein; PilT domain-containing protein	complement(1180935..1181354)	Pseudomonas mendocina ymp	5106553
YP_001186546.1	CDS	Pmen_1046	NC_009439.1	1181351	1181596	R	hypothetical protein	complement(1181351..1181596)	Pseudomonas mendocina ymp	5107706
YP_001186547.1	CDS	Pmen_1048	NC_009439.1	1183089	1186739	D	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; signal transduction protein	1183089..1186739	Pseudomonas mendocina ymp	5106554
YP_001186548.1	CDS	Pmen_1049	NC_009439.1	1187239	1187598	D	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	1187239..1187598	Pseudomonas mendocina ymp	5107708
YP_001186549.1	CDS	Pmen_1050	NC_009439.1	1187618	1189180	D	PFAM: transposase IS66; transposase IS66	1187618..1189180	Pseudomonas mendocina ymp	5107709
YP_001186550.1	CDS	Pmen_1051	NC_009439.1	1189194	1189757	R	hypothetical protein	complement(1189194..1189757)	Pseudomonas mendocina ymp	5107710
YP_001186551.1	CDS	Pmen_1052	NC_009439.1	1189980	1191080	R	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD	complement(1189980..1191080)	Pseudomonas mendocina ymp	5107711
YP_001186552.1	CDS	Pmen_1053	NC_009439.1	1191106	1191696	R	Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase	complement(1191106..1191696)	Pseudomonas mendocina ymp	5107712
YP_001186553.1	CDS	Pmen_1054	NC_009439.1	1191760	1192365	R	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc	complement(1191760..1192365)	Pseudomonas mendocina ymp	5107713
YP_001186554.1	CDS	Pmen_1055	NC_009439.1	1192471	1193403	R	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase	complement(1192471..1193403)	Pseudomonas mendocina ymp	5107714
YP_001186555.1	CDS	ipk	NC_009439.1	1193690	1194565	R	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	complement(1193690..1194565)	Pseudomonas mendocina ymp	5106556
YP_001186556.1	CDS	lolB	NC_009439.1	1194826	1195440	R	Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB	complement(1194826..1195440)	Pseudomonas mendocina ymp	5107716
YP_001186557.1	CDS	Pmen_1058	NC_009439.1	1195440	1197167	R	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein	complement(1195440..1197167)	Pseudomonas mendocina ymp	5107717
YP_001186558.1	CDS	hemA	NC_009439.1	1197377	1198657	D	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase	1197377..1198657	Pseudomonas mendocina ymp	5107718
YP_001186559.1	CDS	prfA	NC_009439.1	1198654	1199736	D	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1	1198654..1199736	Pseudomonas mendocina ymp	5107719
YP_001186560.1	CDS	Pmen_1061	NC_009439.1	1199801	1200685	D	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 11; HemK family modification methylase	1199801..1200685	Pseudomonas mendocina ymp	5107720
YP_001186561.1	CDS	Pmen_1062	NC_009439.1	1200678	1201439	D	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB	1200678..1201439	Pseudomonas mendocina ymp	5107721
YP_001186562.1	CDS	Pmen_1063	NC_009439.1	1201473	1202264	D	converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase	1201473..1202264	Pseudomonas mendocina ymp	5107722
YP_001186563.1	CDS	Pmen_1064	NC_009439.1	1202367	1202882	D	hypothetical protein	1202367..1202882	Pseudomonas mendocina ymp	5107723
YP_001186564.1	CDS	Pmen_1065	NC_009439.1	1202964	1203488	R	hypothetical protein	complement(1202964..1203488)	Pseudomonas mendocina ymp	5107724
YP_001186565.1	CDS	Pmen_1066	NC_009439.1	1203481	1204755	R	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; cyclopropane-fatty-acyl-phospholipid synthase	complement(1203481..1204755)	Pseudomonas mendocina ymp	5107725
YP_001186566.1	CDS	Pmen_1067	NC_009439.1	1204742	1205542	R	PFAM: protein of unknown function DUF1365; hypothetical protein	complement(1204742..1205542)	Pseudomonas mendocina ymp	5107726
YP_001186567.1	CDS	Pmen_1068	NC_009439.1	1205542	1206789	R	PFAM: amine oxidase; FAD dependent oxidoreductase; amine oxidase	complement(1205542..1206789)	Pseudomonas mendocina ymp	5107727
YP_001186568.1	CDS	Pmen_1069	NC_009439.1	1206786	1207541	R	PFAM: short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KR; short-chain dehydrogenase/reductase SDR	complement(1206786..1207541)	Pseudomonas mendocina ymp	5107728
YP_001186569.1	CDS	Pmen_1070	NC_009439.1	1207538	1207960	R	PFAM: protein of unknown function DUF1486; hypothetical protein	complement(1207538..1207960)	Pseudomonas mendocina ymp	5107729
YP_001186570.1	CDS	Pmen_1071	NC_009439.1	1207957	1209390	R	PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; deoxyribodipyrimidine photo-lyase type I	complement(1207957..1209390)	Pseudomonas mendocina ymp	5107730
YP_001186571.1	CDS	Pmen_1072	NC_009439.1	1209378	1210340	R	PFAM: regulatory protein, MerR; MerR family transcriptional regulator	complement(1209378..1210340)	Pseudomonas mendocina ymp	5107731
YP_001186572.1	CDS	Pmen_1073	NC_009439.1	1210340	1211290	R	PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; hypothetical protein	complement(1210340..1211290)	Pseudomonas mendocina ymp	5107732
YP_001186573.1	CDS	Pmen_1074	NC_009439.1	1211545	1211775	R	hypothetical protein	complement(1211545..1211775)	Pseudomonas mendocina ymp	5107733
YP_001186574.1	CDS	Pmen_1075	NC_009439.1	1211772	1212758	R	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	complement(1211772..1212758)	Pseudomonas mendocina ymp	5107734
YP_001186575.1	CDS	Pmen_1076	NC_009439.1	1212941	1213864	D	PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase	1212941..1213864	Pseudomonas mendocina ymp	5107735
YP_001186576.1	CDS	hemH	NC_009439.1	1213877	1214899	D	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase	1213877..1214899	Pseudomonas mendocina ymp	5107736
YP_001186577.1	CDS	Pmen_1078	NC_009439.1	1215064	1216395	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	1215064..1216395	Pseudomonas mendocina ymp	5107737
YP_001186578.1	CDS	Pmen_1079	NC_009439.1	1216527	1217297	D	hypothetical protein	1216527..1217297	Pseudomonas mendocina ymp	5107738
YP_001186579.1	CDS	Pmen_1080	NC_009439.1	1217304	1218029	R	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(1217304..1218029)	Pseudomonas mendocina ymp	5107739
YP_001186580.1	CDS	Pmen_1081	NC_009439.1	1218109	1218450	R	TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein-like; alkylphosphonate utilization operon protein PhnA	complement(1218109..1218450)	Pseudomonas mendocina ymp	5107740
YP_001186581.1	CDS	Pmen_1082	NC_009439.1	1218919	1219698	D	PFAM: glutamine amidotransferase class-I; peptidase C26; peptidase C26	1218919..1219698	Pseudomonas mendocina ymp	5107741
YP_001186582.1	CDS	Pmen_1083	NC_009439.1	1219727	1220680	R	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	complement(1219727..1220680)	Pseudomonas mendocina ymp	5108056
YP_001186583.1	CDS	Pmen_1084	NC_009439.1	1220704	1221135	R	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase	complement(1220704..1221135)	Pseudomonas mendocina ymp	5108057
YP_001186584.1	CDS	Pmen_1085	NC_009439.1	1221276	1222703	D	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator	1221276..1222703	Pseudomonas mendocina ymp	5108058
YP_001186585.1	CDS	Pmen_1086	NC_009439.1	1222697	1223170	R	SMART: Water Stress and Hypersensitive response; water stress/hypersensitive response protein	complement(1222697..1223170)	Pseudomonas mendocina ymp	5108059
YP_001186586.1	CDS	Pmen_1087	NC_009439.1	1223225	1224070	R	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	complement(1223225..1224070)	Pseudomonas mendocina ymp	5108060
YP_001186587.1	CDS	Pmen_1088	NC_009439.1	1224157	1224921	R	PFAM: Phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase	complement(1224157..1224921)	Pseudomonas mendocina ymp	5108061
YP_001186588.1	CDS	Pmen_1089	NC_009439.1	1225021	1225950	R	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); RpiR family transcriptional regulator	complement(1225021..1225950)	Pseudomonas mendocina ymp	5108062
YP_001186589.1	CDS	Pmen_1090	NC_009439.1	1226019	1226783	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(1226019..1226783)	Pseudomonas mendocina ymp	5108063
YP_001186590.1	CDS	Pmen_1091	NC_009439.1	1226808	1227920	R	PFAM: Succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase	complement(1226808..1227920)	Pseudomonas mendocina ymp	5108064
YP_001186591.1	CDS	Pmen_1092	NC_009439.1	1227933	1228628	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	complement(1227933..1228628)	Pseudomonas mendocina ymp	5108065
YP_001186592.1	CDS	Pmen_1093	NC_009439.1	1228640	1229329	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	complement(1228640..1229329)	Pseudomonas mendocina ymp	5108066
YP_001186593.1	CDS	Pmen_1094	NC_009439.1	1229395	1230171	R	TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein, family 3; cationic amino acid ABC transporter periplasmic binding protein	complement(1229395..1230171)	Pseudomonas mendocina ymp	5108067
YP_001186594.1	CDS	Pmen_1095	NC_009439.1	1230548	1232311	D	cyanophycinase-like protein	1230548..1232311	Pseudomonas mendocina ymp	5108068
YP_001186595.1	CDS	Pmen_1096	NC_009439.1	1232390	1232710	D	hypothetical protein	1232390..1232710	Pseudomonas mendocina ymp	5108069
YP_001186596.1	CDS	Pmen_1097	NC_009439.1	1232773	1234113	D	PFAM: outer membrane porin; outer membrane porin	1232773..1234113	Pseudomonas mendocina ymp	5108070
YP_001186597.1	CDS	Pmen_1098	NC_009439.1	1234268	1235032	D	PFAM: extracellular solute-binding protein, family 3; extracellular solute-binding protein	1234268..1235032	Pseudomonas mendocina ymp	5108071
YP_001186598.1	CDS	Pmen_1099	NC_009439.1	1235125	1236381	D	TIGRFAM: cyanophycinase; cyanophycinase	1235125..1236381	Pseudomonas mendocina ymp	5108072
YP_001186599.1	CDS	Pmen_1100	NC_009439.1	1236598	1237392	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KR; short-chain dehydrogenase/reductase SDR	1236598..1237392	Pseudomonas mendocina ymp	5108073
YP_001186600.1	CDS	Pmen_1101	NC_009439.1	1237702	1238268	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(1237702..1238268)	Pseudomonas mendocina ymp	5108074
YP_001186601.1	CDS	Pmen_1102	NC_009439.1	1238300	1238869	R	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	complement(1238300..1238869)	Pseudomonas mendocina ymp	5108075
YP_001186602.1	CDS	Pmen_1103	NC_009439.1	1238953	1240152	D	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter	1238953..1240152	Pseudomonas mendocina ymp	5108076
YP_001186603.1	CDS	Pmen_1104	NC_009439.1	1240149	1241549	D	Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase	1240149..1241549	Pseudomonas mendocina ymp	5108077
YP_001186604.1	CDS	Pmen_1105	NC_009439.1	1241795	1242160	R	hypothetical protein	complement(1241795..1242160)	Pseudomonas mendocina ymp	5108078
YP_001186605.1	CDS	Pmen_1106	NC_009439.1	1242209	1243135	R	reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase	complement(1242209..1243135)	Pseudomonas mendocina ymp	5108079
YP_001186606.1	CDS	Pmen_1107	NC_009439.1	1243331	1244341	R	catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase	complement(1243331..1244341)	Pseudomonas mendocina ymp	5108080
YP_001186607.1	CDS	Pmen_1108	NC_009439.1	1244408	1245658	R	catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase	complement(1244408..1245658)	Pseudomonas mendocina ymp	5108081
YP_001186608.1	CDS	Pmen_1109	NC_009439.1	1245675	1247102	R	TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; arginine/ornithine antiporter	complement(1245675..1247102)	Pseudomonas mendocina ymp	5108082
YP_001186609.1	CDS	putA	NC_009439.1	1247558	1251493	R	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase	complement(1247558..1251493)	Pseudomonas mendocina ymp	5108083
YP_001186610.1	CDS	Pmen_1111	NC_009439.1	1252055	1252270	D	hypothetical protein	1252055..1252270	Pseudomonas mendocina ymp	5108084
YP_001186611.1	CDS	Pmen_1112	NC_009439.1	1252298	1252525	R	hypothetical protein	complement(1252298..1252525)	Pseudomonas mendocina ymp	5108085
YP_001186612.1	CDS	Pmen_1113	NC_009439.1	1252885	1253841	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(1252885..1253841)	Pseudomonas mendocina ymp	5108086
YP_001186613.1	CDS	Pmen_1114	NC_009439.1	1254035	1254637	R	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	complement(1254035..1254637)	Pseudomonas mendocina ymp	5108087
YP_001186614.1	CDS	Pmen_1115	NC_009439.1	1254637	1255050	R	hypothetical protein	complement(1254637..1255050)	Pseudomonas mendocina ymp	5108088
YP_001186615.1	CDS	Pmen_1116	NC_009439.1	1255146	1256039	D	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein	1255146..1256039	Pseudomonas mendocina ymp	5108089
YP_001186616.1	CDS	Pmen_1117	NC_009439.1	1256280	1257278	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase	1256280..1257278	Pseudomonas mendocina ymp	5108090
YP_001186617.1	CDS	Pmen_1118	NC_009439.1	1257269	1257556	R	hypothetical protein	complement(1257269..1257556)	Pseudomonas mendocina ymp	5108091
YP_001186618.1	CDS	Pmen_1119	NC_009439.1	1257905	1258753	D	hypothetical protein	1257905..1258753	Pseudomonas mendocina ymp	5108092
YP_001186619.1	CDS	Pmen_1120	NC_009439.1	1258945	1259994	R	PFAM: NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase	complement(1258945..1259994)	Pseudomonas mendocina ymp	5108093
YP_001186620.1	CDS	Pmen_1121	NC_009439.1	1260023	1260343	R	PFAM: regulatory protein, ArsR; ArsR family transcriptional regulator	complement(1260023..1260343)	Pseudomonas mendocina ymp	5108094
YP_001186621.1	CDS	Pmen_1122	NC_009439.1	1260446	1261021	D	PFAM: protein of unknown function DUF479; hypothetical protein	1260446..1261021	Pseudomonas mendocina ymp	5108095
YP_001186622.1	CDS	Pmen_1123	NC_009439.1	1261074	1263788	R	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase	complement(1261074..1263788)	Pseudomonas mendocina ymp	5108096
YP_001186623.1	CDS	Pmen_1124	NC_009439.1	1263920	1264768	D	PFAM: UspA domain protein; UspA domain-containing protein	1263920..1264768	Pseudomonas mendocina ymp	5108097
YP_001186624.1	CDS	Pmen_1125	NC_009439.1	1264776	1265549	R	PFAM: phospholipid/glycerol acyltransferase; lyso-ornithine lipid acyltransferase	complement(1264776..1265549)	Pseudomonas mendocina ymp	5108098
YP_001186625.1	CDS	Pmen_1126	NC_009439.1	1265693	1266424	R	ornithine-acyl[acyl carrier protein] N-acyltransferase	complement(1265693..1266424)	Pseudomonas mendocina ymp	5108099
YP_001186626.1	CDS	Pmen_1127	NC_009439.1	1266572	1267462	D	hypothetical protein	1266572..1267462	Pseudomonas mendocina ymp	5108100
YP_001186627.1	CDS	Pmen_1128	NC_009439.1	1267529	1268314	D	PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein	1267529..1268314	Pseudomonas mendocina ymp	5108101
YP_001186628.1	CDS	Pmen_1129	NC_009439.1	1268514	1269632	D	PFAM: beta-lactamase; beta-lactamase	1268514..1269632	Pseudomonas mendocina ymp	5108102
YP_001186629.1	CDS	Pmen_1130	NC_009439.1	1269629	1269949	D	hypothetical protein	1269629..1269949	Pseudomonas mendocina ymp	5108103
YP_001186630.1	CDS	Pmen_1131	NC_009439.1	1270024	1270650	D	PFAM: YceI family protein; hypothetical protein	1270024..1270650	Pseudomonas mendocina ymp	5108104
YP_001186631.1	CDS	Pmen_1132	NC_009439.1	1270658	1271806	D	PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase	1270658..1271806	Pseudomonas mendocina ymp	5108105
YP_001186632.1	CDS	Pmen_1133	NC_009439.1	1271975	1274719	D	superfamily I DNA/RNA helicase	1271975..1274719	Pseudomonas mendocina ymp	5108106
YP_001186633.1	CDS	Pmen_1134	NC_009439.1	1275111	1276904	D	PFAM: protein of unknown function DUF1302; hypothetical protein	1275111..1276904	Pseudomonas mendocina ymp	5108107
YP_001186634.1	CDS	Pmen_1135	NC_009439.1	1276926	1278299	D	PFAM: protein of unknown function DUF1329; hypothetical protein	1276926..1278299	Pseudomonas mendocina ymp	5108108
YP_001186635.1	CDS	Pmen_1136	NC_009439.1	1278464	1281070	D	PFAM: regulatory protein, LuxR; SMART: Tetratricopeptide domain protein; regulatory protein LuxR	1278464..1281070	Pseudomonas mendocina ymp	5108109
YP_001186636.1	CDS	Pmen_1137	NC_009439.1	1281218	1282606	R	PFAM: short chain fatty acid transporter; short chain fatty acid transporter	complement(1281218..1282606)	Pseudomonas mendocina ymp	5108110
YP_001186637.1	CDS	Pmen_1138	NC_009439.1	1282716	1283897	R	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	complement(1282716..1283897)	Pseudomonas mendocina ymp	5108111
YP_001186638.1	CDS	Pmen_1139	NC_009439.1	1284078	1284734	R	TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; butyryl-CoA:acetate CoA transferase	complement(1284078..1284734)	Pseudomonas mendocina ymp	5108112
YP_001186639.1	CDS	Pmen_1140	NC_009439.1	1284745	1285443	R	TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A	complement(1284745..1285443)	Pseudomonas mendocina ymp	5108113
YP_001186640.1	CDS	Pmen_1141	NC_009439.1	1285548	1286441	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	1285548..1286441	Pseudomonas mendocina ymp	5108114
YP_001186641.1	CDS	Pmen_1142	NC_009439.1	1286621	1287214	R	MobA-like protein	complement(1286621..1287214)	Pseudomonas mendocina ymp	5108115
YP_001186642.1	CDS	Pmen_1143	NC_009439.1	1287332	1288186	R	PFAM: ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein	complement(1287332..1288186)	Pseudomonas mendocina ymp	5108116
YP_001186643.1	CDS	Pmen_1144	NC_009439.1	1288183	1288506	R	PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase	complement(1288183..1288506)	Pseudomonas mendocina ymp	5108117
YP_001186644.1	CDS	Pmen_1145	NC_009439.1	1288602	1289516	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	1288602..1289516	Pseudomonas mendocina ymp	5108118
YP_001186645.1	CDS	Pmen_1146	NC_009439.1	1289550	1291748	R	PFAM: OsmC family protein; protein of unknown function DUF181; hypothetical protein	complement(1289550..1291748)	Pseudomonas mendocina ymp	5108119
YP_001186646.1	CDS	glk	NC_009439.1	1292143	1293102	D	catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase	1292143..1293102	Pseudomonas mendocina ymp	5108120
YP_001186647.1	CDS	Pmen_1148	NC_009439.1	1293159	1293890	D	PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	1293159..1293890	Pseudomonas mendocina ymp	5108121
YP_001186648.1	CDS	Pmen_1149	NC_009439.1	1293883	1295322	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	1293883..1295322	Pseudomonas mendocina ymp	5108122
YP_001186649.1	CDS	Pmen_1150	NC_009439.1	1295525	1296778	D	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	1295525..1296778	Pseudomonas mendocina ymp	5108123
YP_001186650.1	CDS	Pmen_1151	NC_009439.1	1296950	1297858	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	1296950..1297858	Pseudomonas mendocina ymp	5108124
YP_001186651.1	CDS	Pmen_1152	NC_009439.1	1297851	1298729	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	1297851..1298729	Pseudomonas mendocina ymp	5108125
YP_001186652.1	CDS	Pmen_1153	NC_009439.1	1298740	1299885	D	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein	1298740..1299885	Pseudomonas mendocina ymp	5108126
YP_001186653.1	CDS	Pmen_1154	NC_009439.1	1300004	1301239	D	PFAM: porin, LamB type; porin, LamB type	1300004..1301239	Pseudomonas mendocina ymp	5108127
YP_001186654.1	CDS	Pmen_1155	NC_009439.1	1301233	1302129	D	PFAM: Aldose 1-epimerase; aldose 1-epimerase	1301233..1302129	Pseudomonas mendocina ymp	5108128
YP_001186655.1	CDS	Pmen_1156	NC_009439.1	1302768	1303706	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(1302768..1303706)	Pseudomonas mendocina ymp	5108129
YP_001186656.1	CDS	Pmen_1157	NC_009439.1	1303840	1304802	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	1303840..1304802	Pseudomonas mendocina ymp	5108130
YP_001186657.1	CDS	Pmen_1158	NC_009439.1	1305137	1306102	R	hypothetical protein	complement(1305137..1306102)	Pseudomonas mendocina ymp	5108131
YP_001186658.1	CDS	Pmen_1159	NC_009439.1	1306575	1306763	D	PFAM: regulatory protein, MerR; Prophage CP4-57 regulatory; phage transcriptional regulator AlpA	1306575..1306763	Pseudomonas mendocina ymp	5108132
YP_001186659.1	CDS	Pmen_1160	NC_009439.1	1307124	1308068	D	hypothetical protein	1307124..1308068	Pseudomonas mendocina ymp	5108133
YP_001186660.1	CDS	Pmen_1162	NC_009439.1	1308712	1309512	D	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter	1308712..1309512	Pseudomonas mendocina ymp	5106557
YP_001186661.1	CDS	Pmen_1163	NC_009439.1	1309845	1311407	R	PFAM: transposase IS66; transposase IS66	complement(1309845..1311407)	Pseudomonas mendocina ymp	5108665
YP_001186662.1	CDS	Pmen_1164	NC_009439.1	1311427	1311786	R	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	complement(1311427..1311786)	Pseudomonas mendocina ymp	5108666
YP_001186663.1	CDS	Pmen_1165	NC_009439.1	1311783	1312130	R	hypothetical protein	complement(1311783..1312130)	Pseudomonas mendocina ymp	5108667
YP_001186664.1	CDS	Pmen_1166	NC_009439.1	1312255	1313568	R	PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P	complement(1312255..1313568)	Pseudomonas mendocina ymp	5108668
YP_001186665.1	CDS	Pmen_1167	NC_009439.1	1313987	1314904	D	PFAM: regulatory protein, LysR; LysR family transcriptional regulator	1313987..1314904	Pseudomonas mendocina ymp	5108669
YP_001186666.1	CDS	Pmen_1168	NC_009439.1	1314978	1316306	D	PFAM: outer membrane porin; outer membrane porin	1314978..1316306	Pseudomonas mendocina ymp	5108670
YP_001186667.1	CDS	Pmen_1169	NC_009439.1	1316658	1317959	D	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	1316658..1317959	Pseudomonas mendocina ymp	5108671
YP_001186668.1	CDS	Pmen_1171	NC_009439.1	1318463	1319803	D	PFAM: outer membrane porin; outer membrane porin	1318463..1319803	Pseudomonas mendocina ymp	5106558
YP_001186669.1	CDS	Pmen_1172	NC_009439.1	1319873	1320136	D	hypothetical protein	1319873..1320136	Pseudomonas mendocina ymp	5108673
YP_001186670.1	CDS	Pmen_1173	NC_009439.1	1320916	1322349	R	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; heavy metal sensor signal transduction histidine kinase	complement(1320916..1322349)	Pseudomonas mendocina ymp	5108674
YP_001186671.1	CDS	Pmen_1174	NC_009439.1	1322346	1323020	R	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; two component heavy metal response transcriptional regulator	complement(1322346..1323020)	Pseudomonas mendocina ymp	5108675
YP_001186672.1	CDS	Pmen_1175	NC_009439.1	1323417	1324667	D	PFAM: outer membrane efflux protein; outer membrane efflux protein	1323417..1324667	Pseudomonas mendocina ymp	5108676
YP_001186673.1	CDS	Pmen_1176	NC_009439.1	1324725	1325990	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	1324725..1325990	Pseudomonas mendocina ymp	5108677
YP_001186674.1	CDS	Pmen_1177	NC_009439.1	1326013	1329159	D	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux protein	1326013..1329159	Pseudomonas mendocina ymp	5108678
YP_001186675.1	CDS	Pmen_1178	NC_009439.1	1329389	1330018	R	hypothetical protein	complement(1329389..1330018)	Pseudomonas mendocina ymp	5108679
YP_001186676.1	CDS	Pmen_1179	NC_009439.1	1330113	1330457	R	hypothetical protein	complement(1330113..1330457)	Pseudomonas mendocina ymp	5108680
YP_001186677.1	CDS	Pmen_1180	NC_009439.1	1330538	1330783	D	PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator	1330538..1330783	Pseudomonas mendocina ymp	5108681
YP_001186678.1	CDS	Pmen_1181	NC_009439.1	1330812	1331309	R	PFAM: DNA repair protein RadC; DNA repair protein RadC	complement(1330812..1331309)	Pseudomonas mendocina ymp	5108682
YP_001186679.1	CDS	Pmen_1182	NC_009439.1	1331351	1332247	R	hypothetical protein	complement(1331351..1332247)	Pseudomonas mendocina ymp	5108683
YP_001186680.1	CDS	Pmen_1183	NC_009439.1	1332336	1333340	R	Phage-like protein endonuclease-like protein	complement(1332336..1333340)	Pseudomonas mendocina ymp	5108684
YP_001186681.1	CDS	Pmen_1184	NC_009439.1	1333427	1334395	R	hypothetical protein	complement(1333427..1334395)	Pseudomonas mendocina ymp	5108685
YP_001186682.1	CDS	Pmen_1185	NC_009439.1	1334488	1334814	R	hypothetical protein	complement(1334488..1334814)	Pseudomonas mendocina ymp	5108686
YP_001186683.1	CDS	Pmen_1186	NC_009439.1	1335369	1336154	D	hypothetical protein	1335369..1336154	Pseudomonas mendocina ymp	5108687
YP_001186684.1	CDS	Pmen_1187	NC_009439.1	1336151	1339321	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase	1336151..1339321	Pseudomonas mendocina ymp	5108688
YP_001186685.1	CDS	Pmen_1188	NC_009439.1	1339379	1340638	R	PFAM: phage integrase family protein; phage integrase family protein	complement(1339379..1340638)	Pseudomonas mendocina ymp	5108689
YP_001186686.1	CDS	Pmen_1189	NC_009439.1	1341311	1344226	D	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Cache domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; multi-sensor hybrid histidine kinase	1341311..1344226	Pseudomonas mendocina ymp	5106559
YP_001186687.1	CDS	Pmen_1190	NC_009439.1	1344243	1344488	R	hypothetical protein	complement(1344243..1344488)	Pseudomonas mendocina ymp	5108691
YP_001186688.1	CDS	Pmen_1191	NC_009439.1	1344554	1345579	R	catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester; RNA 3'-terminal-phosphate cyclase	complement(1344554..1345579)	Pseudomonas mendocina ymp	5108692
YP_001186689.1	CDS	Pmen_1192	NC_009439.1	1345681	1346469	R	nucleotidyltransferase-like protein	complement(1345681..1346469)	Pseudomonas mendocina ymp	5108693
YP_001186690.1	CDS	Pmen_1193	NC_009439.1	1346509	1347735	R	PFAM: protein of unknown function UPF0027; hypothetical protein	complement(1346509..1347735)	Pseudomonas mendocina ymp	5108694
YP_001186691.1	CDS	Pmen_1194	NC_009439.1	1347732	1348130	R	hypothetical protein	complement(1347732..1348130)	Pseudomonas mendocina ymp	5108695
YP_001186692.1	CDS	Pmen_1195	NC_009439.1	1348162	1349304	R	PFAM: band 7 protein; hypothetical protein	complement(1348162..1349304)	Pseudomonas mendocina ymp	5108696
YP_001186693.1	CDS	Pmen_1196	NC_009439.1	1350012	1351613	D	PFAM: sigma-54 factor, interaction domain-containing protein; regulator of RNA terminal phosphate cyclase; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; regulator of RNA terminal phosphate cyclase	1350012..1351613	Pseudomonas mendocina ymp	5106561
YP_001186694.1	CDS	Pmen_1197	NC_009439.1	1351607	1353460	R	hypothetical protein	complement(1351607..1353460)	Pseudomonas mendocina ymp	5108698
YP_001186695.1	CDS	Pmen_1198	NC_009439.1	1353604	1353915	D	TraR/DksA family transcriptional regulator	1353604..1353915	Pseudomonas mendocina ymp	5108699
YP_001186696.1	CDS	Pmen_1199	NC_009439.1	1353908	1355548	R	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; sodium/hydrogen exchanger	complement(1353908..1355548)	Pseudomonas mendocina ymp	5108700
YP_001186697.1	CDS	Pmen_1200	NC_009439.1	1355691	1358180	D	ATP-dependent protease-like protein	1355691..1358180	Pseudomonas mendocina ymp	5108701
YP_001186698.1	CDS	Pmen_1201	NC_009439.1	1358346	1358699	D	hypothetical protein	1358346..1358699	Pseudomonas mendocina ymp	5108702
YP_001186699.1	CDS	Pmen_1202	NC_009439.1	1358784	1359347	D	PFAM: Uncharacterized protein UPF0114; hypothetical protein	1358784..1359347	Pseudomonas mendocina ymp	5108703
YP_001186700.1	CDS	Pmen_1203	NC_009439.1	1359489	1359791	D	hypothetical protein	1359489..1359791	Pseudomonas mendocina ymp	5108704
YP_001186701.1	CDS	Pmen_1204	NC_009439.1	1359803	1361365	D	PFAM: deoxyribodipyrimidine photolyase-related protein; deoxyribodipyrimidine photolyase-like protein	1359803..1361365	Pseudomonas mendocina ymp	5108705
YP_001186702.1	CDS	Pmen_1205	NC_009439.1	1361362	1361526	D	hypothetical protein	1361362..1361526	Pseudomonas mendocina ymp	5108706
YP_001186703.1	CDS	Pmen_1206	NC_009439.1	1361597	1362226	D	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase	1361597..1362226	Pseudomonas mendocina ymp	5108707
YP_001186704.1	CDS	Pmen_1207	NC_009439.1	1362386	1362613	R	hypothetical protein	complement(1362386..1362613)	Pseudomonas mendocina ymp	5108708
YP_001186705.1	CDS	Pmen_1208	NC_009439.1	1362823	1365876	R	MexW; inner membrane protein; member of RND (resistance, nodulation, and division) family; involved in resistance to fluoroquinolones, tetracycline, chloramphenicol, erythromycin, ethidium bromide, and acriflavine; functions along with MexV and OprM; multidrug efflux protein	complement(1362823..1365876)	Pseudomonas mendocina ymp	5108709
YP_001186706.1	CDS	Pmen_1209	NC_009439.1	1366076	1367221	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	complement(1366076..1367221)	Pseudomonas mendocina ymp	5108710
YP_001186707.1	CDS	Pmen_1210	NC_009439.1	1367363	1368985	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(1367363..1368985)	Pseudomonas mendocina ymp	5108711
YP_001186708.1	CDS	Pmen_1211	NC_009439.1	1369297	1370817	R	PFAM: protein of unknown function DUF112, transmembrane; hypothetical protein	complement(1369297..1370817)	Pseudomonas mendocina ymp	5108712
YP_001186709.1	CDS	Pmen_1212	NC_009439.1	1370827	1371339	R	hypothetical protein	complement(1370827..1371339)	Pseudomonas mendocina ymp	5108713
YP_001186710.1	CDS	Pmen_1213	NC_009439.1	1371406	1372383	R	PFAM: Uncharacterized protein UPF0065; hypothetical protein	complement(1371406..1372383)	Pseudomonas mendocina ymp	5108714
YP_001186711.1	CDS	Pmen_1214	NC_009439.1	1372418	1373812	R	PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; D-glucarate dehydratase	complement(1372418..1373812)	Pseudomonas mendocina ymp	5108715
YP_001186712.1	CDS	Pmen_1215	NC_009439.1	1374322	1375233	D	catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase	1374322..1375233	Pseudomonas mendocina ymp	5108716
YP_001186713.1	CDS	Pmen_1216	NC_009439.1	1375344	1376693	D	PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; D-glucarate dehydratase	1375344..1376693	Pseudomonas mendocina ymp	5108717
YP_001186714.1	CDS	Pmen_1217	NC_009439.1	1376876	1378216	D	TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter	1376876..1378216	Pseudomonas mendocina ymp	5108718
YP_001186715.1	CDS	Pmen_1218	NC_009439.1	1378239	1379795	D	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; galactarate dehydratase	1378239..1379795	Pseudomonas mendocina ymp	5108719
YP_001186716.1	CDS	Pmen_1219	NC_009439.1	1379809	1380750	D	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase	1379809..1380750	Pseudomonas mendocina ymp	5108720
YP_001186717.1	CDS	Pmen_1220	NC_009439.1	1381137	1382066	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	1381137..1382066	Pseudomonas mendocina ymp	5108721
YP_001186718.1	CDS	Pmen_1221	NC_009439.1	1382063	1382824	D	PFAM: ABC-2 type transporter; ABC transporter	1382063..1382824	Pseudomonas mendocina ymp	5108722
YP_001186719.1	CDS	Pmen_1222	NC_009439.1	1382910	1383302	R	secreted protein-like protein	complement(1382910..1383302)	Pseudomonas mendocina ymp	5108723
YP_001186720.1	CDS	Pmen_1223	NC_009439.1	1383390	1385786	R	TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La	complement(1383390..1385786)	Pseudomonas mendocina ymp	5108724
YP_001186721.1	CDS	Pmen_1224	NC_009439.1	1385884	1386588	R	hypothetical protein	complement(1385884..1386588)	Pseudomonas mendocina ymp	5108725
YP_001186722.1	CDS	Pmen_1225	NC_009439.1	1386863	1387612	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	1386863..1387612	Pseudomonas mendocina ymp	5108726
YP_001186723.1	CDS	Pmen_1226	NC_009439.1	1387694	1388434	D	hypothetical protein	1387694..1388434	Pseudomonas mendocina ymp	5108727
YP_001186724.1	CDS	Pmen_1227	NC_009439.1	1388421	1390760	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; diguanylate cyclase/phosphodiesterase	1388421..1390760	Pseudomonas mendocina ymp	5108728
YP_001186725.1	CDS	Pmen_1228	NC_009439.1	1390764	1391615	D	hypothetical protein	1390764..1391615	Pseudomonas mendocina ymp	5108729
YP_001186726.1	CDS	Pmen_1229	NC_009439.1	1391618	1392037	D	PFAM: globin; globin	1391618..1392037	Pseudomonas mendocina ymp	5108730
YP_001186727.1	CDS	Pmen_1230	NC_009439.1	1392047	1392634	R	TIGRFAM: phosphoheptose isomerase; PFAM: sugar isomerase (SIS); phosphoheptose isomerase	complement(1392047..1392634)	Pseudomonas mendocina ymp	5108731
YP_001186728.1	CDS	Pmen_1231	NC_009439.1	1392649	1393938	R	catalyzes the removal of amino acids from the N termini of peptides; putative aminopeptidase 2	complement(1392649..1393938)	Pseudomonas mendocina ymp	5108732
YP_001186729.1	CDS	Pmen_1232	NC_009439.1	1394136	1394771	R	PFAM: pseudouridine synthase; ribosomal large subunit pseudouridine synthase A	complement(1394136..1394771)	Pseudomonas mendocina ymp	5108733
YP_001186730.1	CDS	minE	NC_009439.1	1395039	1395293	R	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE	complement(1395039..1395293)	Pseudomonas mendocina ymp	5108734
YP_001186731.1	CDS	Pmen_1234	NC_009439.1	1395290	1396105	R	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; septum site-determining protein MinD	complement(1395290..1396105)	Pseudomonas mendocina ymp	5108735
YP_001186732.1	CDS	minC	NC_009439.1	1396208	1396936	R	blocks the formation of polar Z-ring septums; septum formation inhibitor	complement(1396208..1396936)	Pseudomonas mendocina ymp	5108736
YP_001186733.1	CDS	Pmen_1236	NC_009439.1	1397184	1398116	D	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase	1397184..1398116	Pseudomonas mendocina ymp	5108737
YP_001186734.1	CDS	Pmen_1237	NC_009439.1	1398153	1399334	D	PFAM: Patatin; patatin	1398153..1399334	Pseudomonas mendocina ymp	5108738
YP_001186735.1	CDS	Pmen_1238	NC_009439.1	1399429	1400283	R	PFAM: Pirin domain protein domain protein; Pirin domain protein; pirin domain-containing protein	complement(1399429..1400283)	Pseudomonas mendocina ymp	5108739
YP_001186736.1	CDS	Pmen_1239	NC_009439.1	1400396	1401166	R	PFAM: VacJ family lipoprotein; VacJ family lipoprotein	complement(1400396..1401166)	Pseudomonas mendocina ymp	5108740
YP_001186737.1	CDS	Pmen_1240	NC_009439.1	1401159	1402457	R	putative serine protein kinase PrkA	complement(1401159..1402457)	Pseudomonas mendocina ymp	5108741
YP_001186738.1	CDS	Pmen_1241	NC_009439.1	1402543	1403031	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(1402543..1403031)	Pseudomonas mendocina ymp	5108742
YP_001186739.1	CDS	Pmen_1242	NC_009439.1	1403095	1403316	R	hypothetical protein	complement(1403095..1403316)	Pseudomonas mendocina ymp	5109058
YP_001186740.1	CDS	Pmen_1243	NC_009439.1	1403468	1403839	D	hypothetical protein	1403468..1403839	Pseudomonas mendocina ymp	5109059
YP_001186741.1	CDS	Pmen_1244	NC_009439.1	1404084	1404896	D	PFAM: short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase	1404084..1404896	Pseudomonas mendocina ymp	5109060
YP_001186742.1	CDS	Pmen_1245	NC_009439.1	1405006	1406157	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	1405006..1406157	Pseudomonas mendocina ymp	5109061
YP_001186743.1	CDS	Pmen_1246	NC_009439.1	1406232	1406660	D	hypothetical protein	1406232..1406660	Pseudomonas mendocina ymp	5109062
YP_001186744.1	CDS	Pmen_1247	NC_009439.1	1406670	1407002	D	PFAM: protein of unknown function UPF0060; hypothetical protein	1406670..1407002	Pseudomonas mendocina ymp	5109063
YP_001186745.1	CDS	Pmen_1248	NC_009439.1	1407182	1408495	D	PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P	1407182..1408495	Pseudomonas mendocina ymp	5109064
YP_001186746.1	CDS	Pmen_1249	NC_009439.1	1408578	1409702	D	PFAM: protein of unknown function DUF482; hypothetical protein	1408578..1409702	Pseudomonas mendocina ymp	5109065
YP_001186747.1	CDS	Pmen_1250	NC_009439.1	1410159	1411649	D	TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; sodium/proline symporter	1410159..1411649	Pseudomonas mendocina ymp	5109066
YP_001186748.1	CDS	Pmen_1251	NC_009439.1	1411832	1412050	D	hypothetical protein	1411832..1412050	Pseudomonas mendocina ymp	5109067
YP_001186749.1	CDS	Pmen_1252	NC_009439.1	1412103	1412987	R	alpha/beta fold family hydrolase-like protein	complement(1412103..1412987)	Pseudomonas mendocina ymp	5109068
YP_001186750.1	CDS	Pmen_1253	NC_009439.1	1413082	1416180	R	membrane carboxypeptidase	complement(1413082..1416180)	Pseudomonas mendocina ymp	5109069
YP_001186751.1	CDS	Pmen_1254	NC_009439.1	1416381	1417061	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase	1416381..1417061	Pseudomonas mendocina ymp	5109070
YP_001186752.1	CDS	Pmen_1255	NC_009439.1	1417064	1417498	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	1417064..1417498	Pseudomonas mendocina ymp	5109071
YP_001186753.1	CDS	Pmen_1256	NC_009439.1	1417485	1418306	D	PFAM: aldo/keto reductase; aldo/keto reductase	1417485..1418306	Pseudomonas mendocina ymp	5109072
YP_001186754.1	CDS	Pmen_1257	NC_009439.1	1418347	1419306	R	hypothetical protein	complement(1418347..1419306)	Pseudomonas mendocina ymp	5109073
YP_001186755.1	CDS	Pmen_1258	NC_009439.1	1419327	1421042	R	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase	complement(1419327..1421042)	Pseudomonas mendocina ymp	5109074
YP_001186756.1	CDS	Pmen_1259	NC_009439.1	1421161	1421574	D	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	1421161..1421574	Pseudomonas mendocina ymp	5109075
YP_001186757.1	CDS	Pmen_1260	NC_009439.1	1421654	1422931	R	PFAM: outer membrane porin; outer membrane porin	complement(1421654..1422931)	Pseudomonas mendocina ymp	5109076
YP_001186758.1	CDS	Pmen_1261	NC_009439.1	1423580	1424011	D	PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein	1423580..1424011	Pseudomonas mendocina ymp	5109077
YP_001186759.1	CDS	Pmen_1262	NC_009439.1	1424008	1424214	D	PFAM: SlyX family protein; hypothetical protein	1424008..1424214	Pseudomonas mendocina ymp	5109078
YP_001186760.1	CDS	Pmen_1263	NC_009439.1	1424258	1424875	R	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding protein family protein	complement(1424258..1424875)	Pseudomonas mendocina ymp	5109079
YP_001186761.1	CDS	Pmen_1264	NC_009439.1	1425048	1426115	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	complement(1425048..1426115)	Pseudomonas mendocina ymp	5109080
YP_001186762.1	CDS	Pmen_1265	NC_009439.1	1426213	1426683	R	PFAM: Ferritin, Dps family protein; Ferritin, Dps family protein	complement(1426213..1426683)	Pseudomonas mendocina ymp	5109081
YP_001186763.1	CDS	Pmen_1266	NC_009439.1	1426798	1427634	R	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	complement(1426798..1427634)	Pseudomonas mendocina ymp	5109082
YP_001186764.1	CDS	Pmen_1267	NC_009439.1	1427706	1428824	R	PFAM: metal-dependent phosphohydrolase, HD sub domain; Hpt domain protein; metal dependent phosphohydrolase	complement(1427706..1428824)	Pseudomonas mendocina ymp	5109083
YP_001186765.1	CDS	aspS	NC_009439.1	1429024	1430799	D	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase	1429024..1430799	Pseudomonas mendocina ymp	5109084
YP_001186766.1	CDS	Pmen_1269	NC_009439.1	1430905	1431654	D	PFAM: protein of unknown function DUF28; hypothetical protein	1430905..1431654	Pseudomonas mendocina ymp	5109085
YP_001186767.1	CDS	ruvC	NC_009439.1	1431808	1432332	D	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase	1431808..1432332	Pseudomonas mendocina ymp	5109086
YP_001186768.1	CDS	ruvA	NC_009439.1	1432351	1432959	D	plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA	1432351..1432959	Pseudomonas mendocina ymp	5109087
YP_001186769.1	CDS	ruvB	NC_009439.1	1432973	1434025	D	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB	1432973..1434025	Pseudomonas mendocina ymp	5109088
YP_001186770.1	CDS	Pmen_1273	NC_009439.1	1434079	1434531	D	TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; 4-hydroxybenzoyl-CoA thioesterase	1434079..1434531	Pseudomonas mendocina ymp	5109089
YP_001186771.1	CDS	Pmen_1274	NC_009439.1	1434534	1435229	D	PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel	1434534..1435229	Pseudomonas mendocina ymp	5109090
YP_001186772.1	CDS	Pmen_1275	NC_009439.1	1435257	1435709	D	PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR	1435257..1435709	Pseudomonas mendocina ymp	5109091
YP_001186773.1	CDS	Pmen_1276	NC_009439.1	1435709	1436689	D	TIGRFAM: TonB family protein; PFAM: TolA family protein; TonB family protein	1435709..1436689	Pseudomonas mendocina ymp	5109092
YP_001186774.1	CDS	tolB	NC_009439.1	1436695	1437993	D	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB	1436695..1437993	Pseudomonas mendocina ymp	5109093
YP_001186775.1	CDS	Pmen_1278	NC_009439.1	1438046	1438546	D	TIGRFAM: OmpA domain protein; PFAM: OmpA/MotB domain protein; OmpA domain-containing protein	1438046..1438546	Pseudomonas mendocina ymp	5109094
YP_001186776.1	CDS	Pmen_1279	NC_009439.1	1438553	1439365	D	PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein	1438553..1439365	Pseudomonas mendocina ymp	5109095
YP_001186777.1	CDS	Pmen_1280	NC_009439.1	1439548	1440228	D	PFAM: Radical SAM domain protein; radical SAM domain-containing protein	1439548..1440228	Pseudomonas mendocina ymp	5109096
YP_001186778.1	CDS	Pmen_1281	NC_009439.1	1440231	1440905	D	TIGRFAM: exsB protein; PFAM: ExsB family protein; exsB protein	1440231..1440905	Pseudomonas mendocina ymp	5109097
YP_001186779.1	CDS	Pmen_1282	NC_009439.1	1441177	1442235	D	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase	1441177..1442235	Pseudomonas mendocina ymp	5106562
YP_001186780.1	CDS	Pmen_1283	NC_009439.1	1442365	1443438	R	PFAM: conserved hypothetical protein 730; hypothetical protein	complement(1442365..1443438)	Pseudomonas mendocina ymp	5109099
YP_001186781.1	CDS	Pmen_1284	NC_009439.1	1443571	1444974	R	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein	complement(1443571..1444974)	Pseudomonas mendocina ymp	5109100
YP_001186782.1	CDS	Pmen_1285	NC_009439.1	1445100	1447502	D	PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase	1445100..1447502	Pseudomonas mendocina ymp	5109101
YP_001186783.1	CDS	Pmen_1286	NC_009439.1	1447540	1447734	D	hypothetical protein	1447540..1447734	Pseudomonas mendocina ymp	5109102
YP_001186784.1	CDS	Pmen_1287	NC_009439.1	1447748	1448149	R	hypothetical protein	complement(1447748..1448149)	Pseudomonas mendocina ymp	5109103
YP_001186785.1	CDS	Pmen_1288	NC_009439.1	1448492	1450189	D	PFAM: membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein	1448492..1450189	Pseudomonas mendocina ymp	5109104
YP_001186786.1	CDS	Pmen_1289	NC_009439.1	1450249	1450983	D	PFAM: DTW domain containing protein; DTW domain-containing protein	1450249..1450983	Pseudomonas mendocina ymp	5109105
YP_001186787.1	CDS	Pmen_1290	NC_009439.1	1450943	1451914	R	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	complement(1450943..1451914)	Pseudomonas mendocina ymp	5109106
YP_001186788.1	CDS	Pmen_1291	NC_009439.1	1452069	1452716	D	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator	1452069..1452716	Pseudomonas mendocina ymp	5109107
YP_001186789.1	CDS	Pmen_1292	NC_009439.1	1452753	1453679	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(1452753..1453679)	Pseudomonas mendocina ymp	5109108
YP_001186790.1	CDS	Pmen_1293	NC_009439.1	1453744	1454571	D	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit	1453744..1454571	Pseudomonas mendocina ymp	5109109
YP_001186791.1	CDS	Pmen_1294	NC_009439.1	1454708	1455262	R	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase	complement(1454708..1455262)	Pseudomonas mendocina ymp	5109110
YP_001186792.1	CDS	Pmen_1295	NC_009439.1	1455268	1456065	R	PFAM: alpha/beta hydrolase fold; 3-oxoadipate enol-lactonase	complement(1455268..1456065)	Pseudomonas mendocina ymp	5109111
YP_001186793.1	CDS	Pmen_1296	NC_009439.1	1456076	1457002	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(1456076..1457002)	Pseudomonas mendocina ymp	5109112
YP_001186794.1	CDS	Pmen_1297	NC_009439.1	1457077	1457391	D	hypothetical protein	1457077..1457391	Pseudomonas mendocina ymp	5109113
YP_001186795.1	CDS	Pmen_1298	NC_009439.1	1457527	1458126	D	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone)	1457527..1458126	Pseudomonas mendocina ymp	5109114
YP_001186796.1	CDS	Pmen_1299	NC_009439.1	1458345	1459112	D	PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel	1458345..1459112	Pseudomonas mendocina ymp	5109115
YP_001186797.1	CDS	motB	NC_009439.1	1459122	1460012	D	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar motor protein MotB	1459122..1460012	Pseudomonas mendocina ymp	5109116
YP_001186798.1	CDS	Pmen_1301	NC_009439.1	1460074	1460946	D	TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6, transmembrane; carboxylate/amino acid/amine transporter	1460074..1460946	Pseudomonas mendocina ymp	5109117
YP_001186799.1	CDS	Pmen_1302	NC_009439.1	1460946	1461839	D	TIGRFAM: RarD protein, DMT superfamily transporter; transporter DMT superfamily protein	1460946..1461839	Pseudomonas mendocina ymp	5109118
YP_001186800.1	CDS	Pmen_1303	NC_009439.1	1461840	1462418	R	PFAM: bifunctional deaminase-reductase domain protein; deaminase-reductase domain-containing protein	complement(1461840..1462418)	Pseudomonas mendocina ymp	5109119
YP_001186801.1	CDS	Pmen_1304	NC_009439.1	1462513	1462920	R	hypothetical protein	complement(1462513..1462920)	Pseudomonas mendocina ymp	5109120
YP_001186802.1	CDS	Pmen_1305	NC_009439.1	1462977	1464278	R	PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS	complement(1462977..1464278)	Pseudomonas mendocina ymp	5109121
YP_001186803.1	CDS	Pmen_1306	NC_009439.1	1464441	1465766	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase	1464441..1465766	Pseudomonas mendocina ymp	5109122
YP_001186804.1	CDS	Pmen_1307	NC_009439.1	1465920	1467755	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(1465920..1467755)	Pseudomonas mendocina ymp	5109123
YP_001186805.1	CDS	Pmen_1308	NC_009439.1	1467799	1468863	R	PFAM: membrane-bound metal-dependent hydrolase; membrane-bound metal-dependent hydrolase	complement(1467799..1468863)	Pseudomonas mendocina ymp	5109124
YP_001186806.1	CDS	Pmen_1309	NC_009439.1	1468992	1469405	D	PFAM: Class I peptide chain release factor; peptidyl-tRNA hydrolase domain-containing protein	1468992..1469405	Pseudomonas mendocina ymp	5109125
YP_001186807.1	CDS	mgsA	NC_009439.1	1469509	1469973	R	catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase	complement(1469509..1469973)	Pseudomonas mendocina ymp	5109126
YP_001186808.1	CDS	Pmen_1311	NC_009439.1	1469988	1470989	R	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase	complement(1469988..1470989)	Pseudomonas mendocina ymp	5109127
YP_001186809.1	CDS	Pmen_1312	NC_009439.1	1471118	1472941	D	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase	1471118..1472941	Pseudomonas mendocina ymp	5109128
YP_001186810.1	CDS	rdgC	NC_009439.1	1473030	1473995	R	Required for efficient pilin antigenic variation; recombination associated protein	complement(1473030..1473995)	Pseudomonas mendocina ymp	5109129
YP_001186811.1	CDS	Pmen_1314	NC_009439.1	1474610	1475320	D	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase	1474610..1475320	Pseudomonas mendocina ymp	5106564
YP_001186812.1	CDS	Pmen_1315	NC_009439.1	1475658	1476101	D	PFAM: protein of unknown function DUF1232; hypothetical protein	1475658..1476101	Pseudomonas mendocina ymp	5109131
YP_001186813.1	CDS	Pmen_1316	NC_009439.1	1476052	1476822	R	hypothetical protein	complement(1476052..1476822)	Pseudomonas mendocina ymp	5109132
YP_001186814.1	CDS	Pmen_1317	NC_009439.1	1477009	1477329	D	PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator	1477009..1477329	Pseudomonas mendocina ymp	5109133
YP_001186815.1	CDS	Pmen_1318	NC_009439.1	1477332	1477691	D	hypothetical protein	1477332..1477691	Pseudomonas mendocina ymp	5109134
YP_001186816.1	CDS	Pmen_1319	NC_009439.1	1477684	1478169	D	PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein	1477684..1478169	Pseudomonas mendocina ymp	5109135
YP_001186817.1	CDS	Pmen_1320	NC_009439.1	1478158	1479912	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase	complement(1478158..1479912)	Pseudomonas mendocina ymp	5109136
YP_001186818.1	CDS	Pmen_1321	NC_009439.1	1480016	1482130	R	TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease	complement(1480016..1482130)	Pseudomonas mendocina ymp	5109374
YP_001186819.1	CDS	Pmen_1322	NC_009439.1	1482226	1483188	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	1482226..1483188	Pseudomonas mendocina ymp	5109375
YP_001186820.1	CDS	Pmen_1323	NC_009439.1	1483344	1483907	D	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; peroxiredoxin	1483344..1483907	Pseudomonas mendocina ymp	5109376
YP_001186821.1	CDS	Pmen_1324	NC_009439.1	1484061	1485617	D	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulfide oxidoreductase	1484061..1485617	Pseudomonas mendocina ymp	5109377
YP_001186822.1	CDS	Pmen_1325	NC_009439.1	1485766	1486608	R	PFAM: protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; hypothetical protein	complement(1485766..1486608)	Pseudomonas mendocina ymp	5109378
YP_001186823.1	CDS	Pmen_1326	NC_009439.1	1486752	1487606	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	1486752..1487606	Pseudomonas mendocina ymp	5109379
YP_001186824.1	CDS	Pmen_1327	NC_009439.1	1487697	1488350	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD family hydrolase	complement(1487697..1488350)	Pseudomonas mendocina ymp	5109380
YP_001186825.1	CDS	Pmen_1328	NC_009439.1	1488350	1489336	R	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein	complement(1488350..1489336)	Pseudomonas mendocina ymp	5109381
YP_001186826.1	CDS	Pmen_1329	NC_009439.1	1489333	1490127	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(1489333..1490127)	Pseudomonas mendocina ymp	5109382
YP_001186827.1	CDS	Pmen_1330	NC_009439.1	1490114	1490956	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(1490114..1490956)	Pseudomonas mendocina ymp	5109383
YP_001186828.1	CDS	Pmen_1331	NC_009439.1	1490953	1491828	R	hypothetical protein	complement(1490953..1491828)	Pseudomonas mendocina ymp	5109384
YP_001186829.1	CDS	Pmen_1332	NC_009439.1	1491861	1492919	R	Fe3+ ABC transporter periplasmic component-like protein	complement(1491861..1492919)	Pseudomonas mendocina ymp	5109385
YP_001186830.1	CDS	Pmen_1333	NC_009439.1	1493235	1493951	D	PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; GntR family transcriptional regulator	1493235..1493951	Pseudomonas mendocina ymp	5109386
YP_001186831.1	CDS	Pmen_1334	NC_009439.1	1494140	1494514	D	PFAM: DGPFAETKE family protein; DGPFAETKE family protein	1494140..1494514	Pseudomonas mendocina ymp	5109387
YP_001186832.1	CDS	Pmen_1335	NC_009439.1	1494548	1495330	D	PFAM: protein of unknown function DUF899, thioredoxin family protein; hypothetical protein	1494548..1495330	Pseudomonas mendocina ymp	5109388
YP_001186833.1	CDS	Pmen_1336	NC_009439.1	1495496	1495918	D	ketosteroid isomerase-like protein	1495496..1495918	Pseudomonas mendocina ymp	5109389
YP_001186834.1	CDS	Pmen_1337	NC_009439.1	1495934	1496479	R	PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein	complement(1495934..1496479)	Pseudomonas mendocina ymp	5109390
YP_001186835.1	CDS	Pmen_1338	NC_009439.1	1496630	1497757	D	PFAM: peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A	1496630..1497757	Pseudomonas mendocina ymp	5109391
YP_001186836.1	CDS	Pmen_1339	NC_009439.1	1498025	1499293	R	PFAM: outer membrane porin; outer membrane porin	complement(1498025..1499293)	Pseudomonas mendocina ymp	5109392
YP_001186837.1	CDS	Pmen_1340	NC_009439.1	1499760	1500113	D	5-carboxymethyl-2-hydroxymuconate delta-isomerase	1499760..1500113	Pseudomonas mendocina ymp	5109393
YP_001186838.1	CDS	Pmen_1341	NC_009439.1	1500110	1500556	R	TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein, MerR; Redox-sensitive transcriptional activator SoxR; MerR family transcriptional regulator	complement(1500110..1500556)	Pseudomonas mendocina ymp	5109394
YP_001186839.1	CDS	Pmen_1342	NC_009439.1	1500635	1501213	D	PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase	1500635..1501213	Pseudomonas mendocina ymp	5109395
YP_001186840.1	CDS	Pmen_1343	NC_009439.1	1501435	1502559	R	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; glycine cleavage system T protein	complement(1501435..1502559)	Pseudomonas mendocina ymp	5109396
YP_001186841.1	CDS	Pmen_1344	NC_009439.1	1502629	1503882	R	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase	complement(1502629..1503882)	Pseudomonas mendocina ymp	5109397
YP_001186842.1	CDS	Pmen_1345	NC_009439.1	1504068	1506920	R	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase	complement(1504068..1506920)	Pseudomonas mendocina ymp	5109398
YP_001186843.1	CDS	Pmen_1346	NC_009439.1	1506930	1507313	R	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H	complement(1506930..1507313)	Pseudomonas mendocina ymp	5109399
YP_001186844.1	CDS	Pmen_1347	NC_009439.1	1507646	1508197	D	PFAM: superoxide dismutase, copper/zinc binding; superoxide dismutase, copper/zinc binding	1507646..1508197	Pseudomonas mendocina ymp	5109400
YP_001186845.1	CDS	Pmen_1348	NC_009439.1	1508296	1509816	R	PFAM: sigma-54 factor, interaction domain-containing protein; SMART: AAA ATPase; putative PAS/PAC sensor protein	complement(1508296..1509816)	Pseudomonas mendocina ymp	5109401
YP_001186846.1	CDS	Pmen_1349	NC_009439.1	1509890	1510096	D	hypothetical protein	1509890..1510096	Pseudomonas mendocina ymp	5109402
YP_001186847.1	CDS	Pmen_1350	NC_009439.1	1510375	1511073	R	PFAM: Endonuclease I; deoxyribonuclease I	complement(1510375..1511073)	Pseudomonas mendocina ymp	5109403
YP_001186848.1	CDS	Pmen_1351	NC_009439.1	1511215	1511868	R	protein-disulfide isomerase-like protein	complement(1511215..1511868)	Pseudomonas mendocina ymp	5109404
YP_001186849.1	CDS	Pmen_1352	NC_009439.1	1511975	1513105	R	PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS	complement(1511975..1513105)	Pseudomonas mendocina ymp	5109405
YP_001186850.1	CDS	Pmen_1353	NC_009439.1	1513295	1514938	R	PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(1513295..1514938)	Pseudomonas mendocina ymp	5109406
YP_001186851.1	CDS	Pmen_1354	NC_009439.1	1515504	1516391	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(1515504..1516391)	Pseudomonas mendocina ymp	5106565
YP_001186852.1	CDS	Pmen_1355	NC_009439.1	1516783	1517475	R	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal small subunit pseudouridine synthase A	complement(1516783..1517475)	Pseudomonas mendocina ymp	5109408
YP_001186853.1	CDS	Pmen_1356	NC_009439.1	1517479	1517685	R	hypothetical protein	complement(1517479..1517685)	Pseudomonas mendocina ymp	5109409
YP_001186854.1	CDS	Pmen_1357	NC_009439.1	1517685	1519211	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	complement(1517685..1519211)	Pseudomonas mendocina ymp	5109410
YP_001186855.1	CDS	Pmen_1358	NC_009439.1	1519304	1522999	R	TIGRFAM: urea amidolyase related protein; biotin carboxylation domain protein; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin carboxylase	complement(1519304..1522999)	Pseudomonas mendocina ymp	5109411
YP_001186856.1	CDS	Pmen_1359	NC_009439.1	1523166	1523801	R	hypothetical protein	complement(1523166..1523801)	Pseudomonas mendocina ymp	5109412
YP_001186857.1	CDS	Pmen_1360	NC_009439.1	1523812	1524540	R	hypothetical protein	complement(1523812..1524540)	Pseudomonas mendocina ymp	5109413
YP_001186858.1	CDS	Pmen_1361	NC_009439.1	1524621	1525688	R	nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein	complement(1524621..1525688)	Pseudomonas mendocina ymp	5109414
YP_001186859.1	CDS	Pmen_1362	NC_009439.1	1526189	1527214	D	PFAM: 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase	1526189..1527214	Pseudomonas mendocina ymp	5109415
YP_001186860.1	CDS	Pmen_1363	NC_009439.1	1527211	1528143	D	hypothetical protein	1527211..1528143	Pseudomonas mendocina ymp	5109416
YP_001186861.1	CDS	Pmen_1364	NC_009439.1	1528307	1529176	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(1528307..1529176)	Pseudomonas mendocina ymp	5109417
YP_001186862.1	CDS	Pmen_1365	NC_009439.1	1529173	1529988	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(1529173..1529988)	Pseudomonas mendocina ymp	5109418
YP_001186863.1	CDS	Pmen_1366	NC_009439.1	1530449	1531510	R	nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein	complement(1530449..1531510)	Pseudomonas mendocina ymp	5109419
YP_001186864.1	CDS	Pmen_1367	NC_009439.1	1532300	1532749	D	hypothetical protein	1532300..1532749	Pseudomonas mendocina ymp	5109420
YP_001186865.1	CDS	Pmen_1368	NC_009439.1	1532753	1533664	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(1532753..1533664)	Pseudomonas mendocina ymp	5109421
YP_001186866.1	CDS	Pmen_1369	NC_009439.1	1533762	1535549	D	PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein	1533762..1535549	Pseudomonas mendocina ymp	5109422
YP_001186867.1	CDS	Pmen_1370	NC_009439.1	1535628	1535873	D	PFAM: protein of unknown function DUF1145; hypothetical protein	1535628..1535873	Pseudomonas mendocina ymp	5109423
YP_001186868.1	CDS	Pmen_1371	NC_009439.1	1536233	1537117	R	TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase	complement(1536233..1537117)	Pseudomonas mendocina ymp	5109424
YP_001186869.1	CDS	Pmen_1372	NC_009439.1	1537146	1537982	R	PEP phosphonomutase-like protein	complement(1537146..1537982)	Pseudomonas mendocina ymp	5109425
YP_001186870.1	CDS	Pmen_1373	NC_009439.1	1538114	1539217	R	PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase	complement(1538114..1539217)	Pseudomonas mendocina ymp	5109426
YP_001186871.1	CDS	Pmen_1374	NC_009439.1	1539333	1540151	R	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(1539333..1540151)	Pseudomonas mendocina ymp	5109427
YP_001186872.1	CDS	Pmen_1375	NC_009439.1	1540246	1541409	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	complement(1540246..1541409)	Pseudomonas mendocina ymp	5109428
YP_001186873.1	CDS	Pmen_1376	NC_009439.1	1541416	1542663	R	PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor	complement(1541416..1542663)	Pseudomonas mendocina ymp	5109429
YP_001186874.1	CDS	Pmen_1377	NC_009439.1	1542761	1544257	R	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase	complement(1542761..1544257)	Pseudomonas mendocina ymp	5109430
YP_001186875.1	CDS	Pmen_1378	NC_009439.1	1544381	1545262	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; Cupin 2, conserved barrel domain protein; AraC family transcriptional regulator	1544381..1545262	Pseudomonas mendocina ymp	5109431
YP_001186876.1	CDS	Pmen_1379	NC_009439.1	1545274	1545774	R	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	complement(1545274..1545774)	Pseudomonas mendocina ymp	5109432
YP_001186877.1	CDS	Pmen_1380	NC_009439.1	1545785	1546597	R	PFAM: HDOD; putative signal transduction protein	complement(1545785..1546597)	Pseudomonas mendocina ymp	5109433
YP_001186878.1	CDS	Pmen_1381	NC_009439.1	1546735	1547424	D	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase	1546735..1547424	Pseudomonas mendocina ymp	5109434
YP_001186879.1	CDS	Pmen_1382	NC_009439.1	1547474	1548334	R	hypothetical protein	complement(1547474..1548334)	Pseudomonas mendocina ymp	5109435
YP_001186880.1	CDS	Pmen_1383	NC_009439.1	1548527	1549228	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(1548527..1549228)	Pseudomonas mendocina ymp	5109436
YP_001186881.1	CDS	livG	NC_009439.1	1549232	1549999	R	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit	complement(1549232..1549999)	Pseudomonas mendocina ymp	5109437
YP_001186882.1	CDS	livM	NC_009439.1	1549996	1551267	R	Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease	complement(1549996..1551267)	Pseudomonas mendocina ymp	5109438
YP_001186883.1	CDS	Pmen_1386	NC_009439.1	1551264	1552187	R	PFAM: inner-membrane translocator; inner-membrane translocator	complement(1551264..1552187)	Pseudomonas mendocina ymp	5109439
YP_001186884.1	CDS	Pmen_1387	NC_009439.1	1552305	1553426	R	PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor	complement(1552305..1553426)	Pseudomonas mendocina ymp	5109440
YP_001186885.1	CDS	Pmen_1388	NC_009439.1	1553721	1554038	D	hypothetical protein	1553721..1554038	Pseudomonas mendocina ymp	5109441
YP_001186886.1	CDS	Pmen_1389	NC_009439.1	1554131	1554499	D	hypothetical protein	1554131..1554499	Pseudomonas mendocina ymp	5109442
YP_001186887.1	CDS	Pmen_1390	NC_009439.1	1554572	1554790	R	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; BFD/(2Fe-2S)-binding domain-containing protein	complement(1554572..1554790)	Pseudomonas mendocina ymp	5109443
YP_001186888.1	CDS	Pmen_1391	NC_009439.1	1554961	1555635	R	Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T	complement(1554961..1555635)	Pseudomonas mendocina ymp	5109444
YP_001186889.1	CDS	Pmen_1392	NC_009439.1	1555632	1556678	R	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase	complement(1555632..1556678)	Pseudomonas mendocina ymp	5109445
YP_001186890.1	CDS	Pmen_1393	NC_009439.1	1556872	1557819	D	PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein	1556872..1557819	Pseudomonas mendocina ymp	5109446
YP_001186891.1	CDS	Pmen_1394	NC_009439.1	1557935	1559152	D	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase	1557935..1559152	Pseudomonas mendocina ymp	5109447
YP_001186892.1	CDS	Pmen_1395	NC_009439.1	1559224	1559616	D	TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase	1559224..1559616	Pseudomonas mendocina ymp	5109448
YP_001186893.1	CDS	Pmen_1396	NC_009439.1	1559686	1560756	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase	1559686..1560756	Pseudomonas mendocina ymp	5109449
YP_001186894.1	CDS	Pmen_1397	NC_009439.1	1560801	1560980	R	hypothetical protein	complement(1560801..1560980)	Pseudomonas mendocina ymp	5109450
YP_001186895.1	CDS	Pmen_1398	NC_009439.1	1561092	1561730	R	TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase / endonuclease III	complement(1561092..1561730)	Pseudomonas mendocina ymp	5109451
YP_001186896.1	CDS	Pmen_1399	NC_009439.1	1561727	1562434	R	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE	complement(1561727..1562434)	Pseudomonas mendocina ymp	5109452
YP_001186897.1	CDS	Pmen_1400	NC_009439.1	1562431	1563066	R	TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; RnfABCDGE type electron transport complex subunit G	complement(1562431..1563066)	Pseudomonas mendocina ymp	5109689
YP_001186898.1	CDS	Pmen_1401	NC_009439.1	1563069	1564100	R	TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; RnfABCDGE type electron transport complex subunit D	complement(1563069..1564100)	Pseudomonas mendocina ymp	5109690
YP_001186899.1	CDS	Pmen_1402	NC_009439.1	1564240	1567074	R	part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC	complement(1564240..1567074)	Pseudomonas mendocina ymp	5109691
YP_001186900.1	CDS	Pmen_1403	NC_009439.1	1567071	1567646	R	part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB	complement(1567071..1567646)	Pseudomonas mendocina ymp	5109692
YP_001186901.1	CDS	Pmen_1404	NC_009439.1	1567643	1568227	R	TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; Na(+)-translocating NADH-quinone reductase subunit E	complement(1567643..1568227)	Pseudomonas mendocina ymp	5109693
YP_001186902.1	CDS	metG	NC_009439.1	1568347	1570383	R	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase	complement(1568347..1570383)	Pseudomonas mendocina ymp	5109694
YP_001186903.1	CDS	Pmen_1406	NC_009439.1	1570568	1571656	D	PFAM: protein of unknown function DUF59; hypothetical protein	1570568..1571656	Pseudomonas mendocina ymp	5109695
YP_001186904.1	CDS	Pmen_1407	NC_009439.1	1572179	1572388	R	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding protein family protein	complement(1572179..1572388)	Pseudomonas mendocina ymp	5109696
YP_001186905.1	CDS	dcd	NC_009439.1	1572690	1573256	D	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase	1572690..1573256	Pseudomonas mendocina ymp	5109697
YP_001186906.1	CDS	Pmen_1409	NC_009439.1	1573393	1573605	D	hypothetical protein	1573393..1573605	Pseudomonas mendocina ymp	5109698
YP_001186907.1	CDS	nadE	NC_009439.1	1573701	1574528	R	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase	complement(1573701..1574528)	Pseudomonas mendocina ymp	5109699
YP_001186908.1	CDS	Pmen_1411	NC_009439.1	1574539	1575738	R	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase	complement(1574539..1575738)	Pseudomonas mendocina ymp	5109700
YP_001186909.1	CDS	Pmen_1412	NC_009439.1	1575735	1576379	R	PFAM: isochorismatase hydrolase; isochorismatase hydrolase	complement(1575735..1576379)	Pseudomonas mendocina ymp	5109701
YP_001186910.1	CDS	Pmen_1413	NC_009439.1	1576520	1577209	D	PFAM: NUDIX hydrolase; NUDIX hydrolase	1576520..1577209	Pseudomonas mendocina ymp	5109702
YP_001186911.1	CDS	Pmen_1414	NC_009439.1	1577468	1579981	R	PFAM: peptidase S45, penicillin amidase; penicillin amidase	complement(1577468..1579981)	Pseudomonas mendocina ymp	5109703
YP_001186912.1	CDS	Pmen_1415	NC_009439.1	1580153	1580617	R	hypothetical protein	complement(1580153..1580617)	Pseudomonas mendocina ymp	5109704
YP_001186913.1	CDS	Pmen_1416	NC_009439.1	1580625	1580816	R	PFAM: SEC-C motif domain protein; SecC motif-containing protein	complement(1580625..1580816)	Pseudomonas mendocina ymp	5109705
YP_001186914.1	CDS	Pmen_1417	NC_009439.1	1580822	1581319	R	SMART: Water Stress and Hypersensitive response; water stress/hypersensitive response protein	complement(1580822..1581319)	Pseudomonas mendocina ymp	5109706
YP_001186915.1	CDS	Pmen_1418	NC_009439.1	1581513	1582067	D	hypothetical protein	1581513..1582067	Pseudomonas mendocina ymp	5109707
YP_001186916.1	CDS	Pmen_1419	NC_009439.1	1582176	1583297	R	hypothetical protein	complement(1582176..1583297)	Pseudomonas mendocina ymp	5109708
YP_001186917.1	CDS	Pmen_1420	NC_009439.1	1583364	1583846	R	PFAM: SEC-C motif domain protein; hypothetical protein	complement(1583364..1583846)	Pseudomonas mendocina ymp	5109709
YP_001186918.1	CDS	Pmen_1421	NC_009439.1	1583851	1584348	R	hypothetical protein	complement(1583851..1584348)	Pseudomonas mendocina ymp	5109710
YP_001186919.1	CDS	Pmen_1422	NC_009439.1	1584512	1585144	D	PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein	1584512..1585144	Pseudomonas mendocina ymp	5109711
YP_001186920.1	CDS	Pmen_1423	NC_009439.1	1585276	1586010	D	PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein	1585276..1586010	Pseudomonas mendocina ymp	5109712
YP_001186921.1	CDS	Pmen_1424	NC_009439.1	1586080	1586469	D	PFAM: protein of unknown function DUF1145; hypothetical protein	1586080..1586469	Pseudomonas mendocina ymp	5109713
YP_001186922.1	CDS	Pmen_1425	NC_009439.1	1586462	1587223	D	hypothetical protein	1586462..1587223	Pseudomonas mendocina ymp	5109714
YP_001186923.1	CDS	Pmen_1426	NC_009439.1	1587242	1587706	R	hypothetical protein	complement(1587242..1587706)	Pseudomonas mendocina ymp	5109715
YP_001186924.1	CDS	dinG	NC_009439.1	1587846	1589990	D	helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG	1587846..1589990	Pseudomonas mendocina ymp	5109716
YP_001186925.1	CDS	Pmen_1428	NC_009439.1	1589992	1590333	R	TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG	complement(1589992..1590333)	Pseudomonas mendocina ymp	5109717
YP_001186926.1	CDS	Pmen_1429	NC_009439.1	1590330	1590641	R	PFAM: multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F	complement(1590330..1590641)	Pseudomonas mendocina ymp	5109718
YP_001186927.1	CDS	Pmen_1430	NC_009439.1	1590638	1591135	R	PFAM: cation antiporter; cation antiporter	complement(1590638..1591135)	Pseudomonas mendocina ymp	5109719
YP_001186928.1	CDS	Pmen_1431	NC_009439.1	1591135	1592631	R	PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone)	complement(1591135..1592631)	Pseudomonas mendocina ymp	5109720
YP_001186929.1	CDS	Pmen_1432	NC_009439.1	1592628	1593032	R	PFAM: NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L	complement(1592628..1593032)	Pseudomonas mendocina ymp	5109721
YP_001186930.1	CDS	Pmen_1433	NC_009439.1	1593032	1595752	R	PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; NADH dehydrogenase (quinone)	complement(1593032..1595752)	Pseudomonas mendocina ymp	5109722
YP_001186931.1	CDS	Pmen_1434	NC_009439.1	1595992	1597137	D	PFAM: beta-lactamase; beta-lactamase	1595992..1597137	Pseudomonas mendocina ymp	5109723
YP_001186932.1	CDS	Pmen_1435	NC_009439.1	1597220	1597873	D	PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein	1597220..1597873	Pseudomonas mendocina ymp	5109724
YP_001186933.1	CDS	Pmen_1436	NC_009439.1	1597908	1598555	D	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase	1597908..1598555	Pseudomonas mendocina ymp	5109725
YP_001186934.1	CDS	Pmen_1437	NC_009439.1	1598629	1599744	D	PFAM: helix-turn-helix, Fis-type; sugar diacid recognition domain protein; CdaR family transcriptional regulator	1598629..1599744	Pseudomonas mendocina ymp	5109726
YP_001186935.1	CDS	Pmen_1438	NC_009439.1	1599939	1601306	D	PFAM: Gluconate transporter; Citrate transporter; gluconate transporter	1599939..1601306	Pseudomonas mendocina ymp	5109727
YP_001186936.1	CDS	Pmen_1439	NC_009439.1	1601362	1602504	D	PFAM: glycerate kinase; glycerate kinase	1601362..1602504	Pseudomonas mendocina ymp	5109728
YP_001186937.1	CDS	Pmen_1440	NC_009439.1	1602629	1603090	D	PFAM: 17 kDa surface antigen; 17 kDa surface antigen	1602629..1603090	Pseudomonas mendocina ymp	5109729
YP_001186938.1	CDS	Pmen_1441	NC_009439.1	1603470	1606262	D	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A	1603470..1606262	Pseudomonas mendocina ymp	5109730
YP_001186939.1	CDS	Pmen_1442	NC_009439.1	1606264	1606593	D	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C	1606264..1606593	Pseudomonas mendocina ymp	5109731
YP_001186940.1	CDS	Pmen_1443	NC_009439.1	1606590	1608095	D	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D	1606590..1608095	Pseudomonas mendocina ymp	5109732
YP_001186941.1	CDS	Pmen_1444	NC_009439.1	1608092	1608589	D	PFAM: cation antiporter; cation antiporter	1608092..1608589	Pseudomonas mendocina ymp	5109733
YP_001186942.1	CDS	Pmen_1445	NC_009439.1	1608574	1608843	D	PFAM: multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F	1608574..1608843	Pseudomonas mendocina ymp	5109734
YP_001186943.1	CDS	Pmen_1446	NC_009439.1	1608856	1609194	D	subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit G	1608856..1609194	Pseudomonas mendocina ymp	5109735
YP_001186944.1	CDS	Pmen_1447	NC_009439.1	1609289	1610194	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	1609289..1610194	Pseudomonas mendocina ymp	5109736
YP_001186945.1	CDS	Pmen_1448	NC_009439.1	1610211	1610723	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	1610211..1610723	Pseudomonas mendocina ymp	5109737
YP_001186946.1	CDS	Pmen_1449	NC_009439.1	1610720	1611124	D	hypothetical protein	1610720..1611124	Pseudomonas mendocina ymp	5109738
YP_001186947.1	CDS	Pmen_1450	NC_009439.1	1611121	1612734	R	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase	complement(1611121..1612734)	Pseudomonas mendocina ymp	5109739
YP_001186948.1	CDS	Pmen_1451	NC_009439.1	1612820	1613827	R	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase	complement(1612820..1613827)	Pseudomonas mendocina ymp	5109740
YP_001186949.1	CDS	Pmen_1452	NC_009439.1	1613986	1614654	R	hypothetical protein	complement(1613986..1614654)	Pseudomonas mendocina ymp	5109741
YP_001186950.1	CDS	Pmen_1453	NC_009439.1	1614880	1615761	D	PFAM: pseudouridine synthase; pseudouridine synthase	1614880..1615761	Pseudomonas mendocina ymp	5109742
YP_001186951.1	CDS	Pmen_1454	NC_009439.1	1615854	1616876	R	PFAM: putative ammonia monooxygenase; putative ammonia monooxygenase	complement(1615854..1616876)	Pseudomonas mendocina ymp	5109743
YP_001186952.1	CDS	Pmen_1455	NC_009439.1	1616860	1618380	R	PFAM: protein of unknown function DUF112, transmembrane; hypothetical protein	complement(1616860..1618380)	Pseudomonas mendocina ymp	5109744
YP_001186953.1	CDS	Pmen_1456	NC_009439.1	1618382	1618825	R	hypothetical protein	complement(1618382..1618825)	Pseudomonas mendocina ymp	5109745
YP_001186954.1	CDS	Pmen_1457	NC_009439.1	1618892	1619869	R	PFAM: Uncharacterized protein UPF0065; hypothetical protein	complement(1618892..1619869)	Pseudomonas mendocina ymp	5109746
YP_001186955.1	CDS	Pmen_1458	NC_009439.1	1619901	1621166	R	PFAM: outer membrane porin; outer membrane porin	complement(1619901..1621166)	Pseudomonas mendocina ymp	5109747
YP_001186956.1	CDS	Pmen_1459	NC_009439.1	1621432	1622103	D	PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	1621432..1622103	Pseudomonas mendocina ymp	5109748
YP_001186957.1	CDS	Pmen_1460	NC_009439.1	1622100	1623497	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Two-component sensor kinase N-terminal domain protein; integral membrane sensor signal transduction histidine kinase	1622100..1623497	Pseudomonas mendocina ymp	5109749
YP_001186958.1	CDS	Pmen_1461	NC_009439.1	1623480	1624235	R	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(1623480..1624235)	Pseudomonas mendocina ymp	5109750
YP_001186959.1	CDS	Pmen_1462	NC_009439.1	1624301	1625137	R	PFAM: HDOD; putative signal transduction protein	complement(1624301..1625137)	Pseudomonas mendocina ymp	5109751
YP_001186960.1	CDS	Pmen_1463	NC_009439.1	1625184	1626125	R	GcvT-like aminomethyltransferase	complement(1625184..1626125)	Pseudomonas mendocina ymp	5109752
YP_001186961.1	CDS	Pmen_1464	NC_009439.1	1626271	1626525	D	PFAM: protein of unknown function DUF339; hypothetical protein	1626271..1626525	Pseudomonas mendocina ymp	5109753
YP_001186962.1	CDS	Pmen_1465	NC_009439.1	1626509	1626976	D	hypothetical protein	1626509..1626976	Pseudomonas mendocina ymp	5109754
YP_001186963.1	CDS	Pmen_1466	NC_009439.1	1626930	1628561	R	catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase	complement(1626930..1628561)	Pseudomonas mendocina ymp	5109755
YP_001186964.1	CDS	algU	NC_009439.1	1628939	1629520	D	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor regulates genes involved in alginate biosynthesis; RNA polymerase sigma factor AlgU	1628939..1629520	Pseudomonas mendocina ymp	5109756
YP_001186965.1	CDS	Pmen_1468	NC_009439.1	1629551	1630126	D	PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; anti sigma-E protein, RseA	1629551..1630126	Pseudomonas mendocina ymp	5109757
YP_001186966.1	CDS	Pmen_1469	NC_009439.1	1630135	1631082	D	PFAM: MucB/RseB family protein; sigma E regulatory protein MucB/RseB	1630135..1631082	Pseudomonas mendocina ymp	5109758
YP_001186967.1	CDS	Pmen_1470	NC_009439.1	1631079	1631534	D	PFAM: Positive regulator of sigma(E), RseC/MucC; sigma E positive regulator RseC/MucC	1631079..1631534	Pseudomonas mendocina ymp	5109759
YP_001186968.1	CDS	Pmen_1471	NC_009439.1	1631570	1632994	D	TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do	1631570..1632994	Pseudomonas mendocina ymp	5109760
YP_001186969.1	CDS	Pmen_1472	NC_009439.1	1633146	1634945	D	binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA	1633146..1634945	Pseudomonas mendocina ymp	5109761
YP_001186970.1	CDS	Pmen_1473	NC_009439.1	1634952	1635806	D	TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I	1634952..1635806	Pseudomonas mendocina ymp	5109762
YP_001186971.1	CDS	Pmen_1474	NC_009439.1	1635895	1636272	D	hypothetical protein	1635895..1636272	Pseudomonas mendocina ymp	5109763
YP_001186972.1	CDS	rnc	NC_009439.1	1636269	1636958	D	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III	1636269..1636958	Pseudomonas mendocina ymp	5109764
YP_001186973.1	CDS	era	NC_009439.1	1636951	1637850	D	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era	1636951..1637850	Pseudomonas mendocina ymp	5109765
YP_001186974.1	CDS	recO	NC_009439.1	1637908	1638597	D	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO	1637908..1638597	Pseudomonas mendocina ymp	5109766
YP_001186975.1	CDS	Pmen_1478	NC_009439.1	1638590	1639336	D	involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase	1638590..1639336	Pseudomonas mendocina ymp	5108429
YP_001186976.1	CDS	Pmen_1479	NC_009439.1	1639440	1640324	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(1639440..1640324)	Pseudomonas mendocina ymp	5108430
YP_001186977.1	CDS	Pmen_1480	NC_009439.1	1640442	1640705	D	hypothetical protein	1640442..1640705	Pseudomonas mendocina ymp	5108431
YP_001186978.1	CDS	Pmen_1481	NC_009439.1	1640733	1641701	R	TIGRFAM: putative methyltransferase; PFAM: methyltransferase, putative; Methyltransferase type 11; Methyltransferase type 12; putative methyltransferase	complement(1640733..1641701)	Pseudomonas mendocina ymp	5108432
YP_001186979.1	CDS	Pmen_1482	NC_009439.1	1641698	1642441	R	TIGRFAM: putative methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; putative methyltransferase	complement(1641698..1642441)	Pseudomonas mendocina ymp	5108433
YP_001186980.1	CDS	Pmen_1483	NC_009439.1	1642542	1643180	R	PFAM: YhhN family protein; hypothetical protein	complement(1642542..1643180)	Pseudomonas mendocina ymp	5108434
YP_001186981.1	CDS	Pmen_1484	NC_009439.1	1643334	1644569	D	PFAM: sigma-70 region 2 domain protein; Tetratricopeptide TPR_2 repeat protein; Sigma-70, region 4 type 2; RNA polymerase ECF-subfamily sigma factor	1643334..1644569	Pseudomonas mendocina ymp	5108435
YP_001186982.1	CDS	Pmen_1485	NC_009439.1	1644659	1647502	R	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA	complement(1644659..1647502)	Pseudomonas mendocina ymp	5108436
YP_001186983.1	CDS	Pmen_1486	NC_009439.1	1647676	1647969	D	hypothetical protein	1647676..1647969	Pseudomonas mendocina ymp	5108437
YP_001186984.1	CDS	Pmen_1487	NC_009439.1	1648005	1648604	D	PFAM: 2OG-Fe(II) oxygenase; DNA-N1-methyladenine dioxygenase	1648005..1648604	Pseudomonas mendocina ymp	5108438
YP_001186985.1	CDS	Pmen_1488	NC_009439.1	1648601	1648762	D	hypothetical protein	1648601..1648762	Pseudomonas mendocina ymp	5108439
YP_001186986.1	CDS	Pmen_1489	NC_009439.1	1648964	1649080	D	hypothetical protein	1648964..1649080	Pseudomonas mendocina ymp	5108440
YP_001186987.1	CDS	Pmen_1490	NC_009439.1	1649294	1651282	D	PFAM: Fusaric acid resistance protein conserved region; fusaric acid resistance protein region	1649294..1651282	Pseudomonas mendocina ymp	5108441
YP_001186988.1	CDS	Pmen_1491	NC_009439.1	1651269	1651472	D	PFAM: protein of unknown function DUF1656; hypothetical protein	1651269..1651472	Pseudomonas mendocina ymp	5108442
YP_001186989.1	CDS	Pmen_1492	NC_009439.1	1651487	1652341	D	PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein	1651487..1652341	Pseudomonas mendocina ymp	5108443
YP_001186990.1	CDS	Pmen_1493	NC_009439.1	1652379	1652849	R	PFAM: MaoC domain protein dehydratase; dehydratase	complement(1652379..1652849)	Pseudomonas mendocina ymp	5108444
YP_001186991.1	CDS	Pmen_1494	NC_009439.1	1652846	1653826	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(1652846..1653826)	Pseudomonas mendocina ymp	5108445
YP_001186992.1	CDS	Pmen_1495	NC_009439.1	1654172	1655860	D	Disruption of the fadD2 gene did not have any effect on the catabolism of acetic, butyric and longer fatty acids (aliphatic or aromatic); however, might be involved in the specific activation of other fatty acids and may be functional when FadD1 is inactivated.; long-chain-fatty-acid--CoA ligase	1654172..1655860	Pseudomonas mendocina ymp	5108446
YP_001186993.1	CDS	Pmen_1496	NC_009439.1	1656266	1657954	D	activates fatty acids by binding to coenzyme A; involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids; long-chain-fatty-acid--CoA ligase	1656266..1657954	Pseudomonas mendocina ymp	5108447
YP_001186994.1	CDS	Pmen_1497	NC_009439.1	1658468	1659643	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(1658468..1659643)	Pseudomonas mendocina ymp	5108448
YP_001186995.1	CDS	Pmen_1498	NC_009439.1	1659640	1660542	R	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	complement(1659640..1660542)	Pseudomonas mendocina ymp	5108449
YP_001186996.1	CDS	Pmen_1499	NC_009439.1	1660628	1661128	D	PFAM: regulatory protein, MarR; MarR family transcriptional regulator	1660628..1661128	Pseudomonas mendocina ymp	5108450
YP_001186997.1	CDS	Pmen_1500	NC_009439.1	1661244	1661546	D	PFAM: regulatory protein, ArsR; ArsR family transcriptional regulator	1661244..1661546	Pseudomonas mendocina ymp	5108451
YP_001186998.1	CDS	Pmen_1501	NC_009439.1	1661695	1662669	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	1661695..1662669	Pseudomonas mendocina ymp	5108452
YP_001186999.1	CDS	Pmen_1502	NC_009439.1	1662714	1663058	D	PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase	1662714..1663058	Pseudomonas mendocina ymp	5108453
YP_001187000.1	CDS	Pmen_1503	NC_009439.1	1663342	1663599	D	hypothetical protein	1663342..1663599	Pseudomonas mendocina ymp	5108454
YP_001187001.1	CDS	Pmen_1504	NC_009439.1	1663652	1664095	R	PFAM: regulatory protein, LysR; LysR family transcriptional regulator	complement(1663652..1664095)	Pseudomonas mendocina ymp	5108455
YP_001187002.1	CDS	Pmen_1505	NC_009439.1	1664176	1665363	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	1664176..1665363	Pseudomonas mendocina ymp	5108456
YP_001187003.1	CDS	Pmen_1506	NC_009439.1	1665596	1666585	D	hypothetical protein	1665596..1666585	Pseudomonas mendocina ymp	5108457
YP_001187004.1	CDS	Pmen_1507	NC_009439.1	1666635	1666937	R	hypothetical protein	complement(1666635..1666937)	Pseudomonas mendocina ymp	5108458
YP_001187005.1	CDS	Pmen_1508	NC_009439.1	1667594	1668190	R	PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase, coenzyme F420-dependent	complement(1667594..1668190)	Pseudomonas mendocina ymp	5108459
YP_001187006.1	CDS	Pmen_1509	NC_009439.1	1668202	1668954	R	PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	complement(1668202..1668954)	Pseudomonas mendocina ymp	5108460
YP_001187007.1	CDS	Pmen_1510	NC_009439.1	1669065	1670003	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	1669065..1670003	Pseudomonas mendocina ymp	5108461
YP_001187008.1	CDS	Pmen_1511	NC_009439.1	1670120	1674136	D	TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like; ATP-dependent helicase HrpA	1670120..1674136	Pseudomonas mendocina ymp	5108462
YP_001187009.1	CDS	Pmen_1512	NC_009439.1	1674185	1675630	D	lysophospholipase-like protein	1674185..1675630	Pseudomonas mendocina ymp	5108463
YP_001187010.1	CDS	Pmen_1514	NC_009439.1	1676053	1677387	R	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator	complement(1676053..1677387)	Pseudomonas mendocina ymp	5106566
YP_001187011.1	CDS	Pmen_1515	NC_009439.1	1677471	1678085	D	PFAM: ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein	1677471..1678085	Pseudomonas mendocina ymp	5108465
YP_001187012.1	CDS	Pmen_1516	NC_009439.1	1678151	1678678	D	hypothetical protein	1678151..1678678	Pseudomonas mendocina ymp	5108466
YP_001187013.1	CDS	Pmen_1517	NC_009439.1	1678733	1679932	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(1678733..1679932)	Pseudomonas mendocina ymp	5108467
YP_001187014.1	CDS	Pmen_1518	NC_009439.1	1679996	1681069	R	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein	complement(1679996..1681069)	Pseudomonas mendocina ymp	5108468
YP_001187015.1	CDS	Pmen_1519	NC_009439.1	1681176	1681952	D	PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein, ArsR; ArsR family transcriptional regulator	1681176..1681952	Pseudomonas mendocina ymp	5108469
YP_001187016.1	CDS	Pmen_1520	NC_009439.1	1682044	1682766	D	PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase	1682044..1682766	Pseudomonas mendocina ymp	5108470
YP_001187017.1	CDS	Pmen_1521	NC_009439.1	1682785	1683285	D	dual specificity protein phosphatase	1682785..1683285	Pseudomonas mendocina ymp	5108471
YP_001187018.1	CDS	Pmen_1522	NC_009439.1	1683299	1684303	D	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase	1683299..1684303	Pseudomonas mendocina ymp	5108472
YP_001187019.1	CDS	Pmen_1523	NC_009439.1	1684499	1685725	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	1684499..1685725	Pseudomonas mendocina ymp	5108473
YP_001187020.1	CDS	Pmen_1524	NC_009439.1	1685897	1686376	D	hypothetical protein	1685897..1686376	Pseudomonas mendocina ymp	5108474
YP_001187021.1	CDS	Pmen_1525	NC_009439.1	1686556	1687866	D	TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; CitMHS family citrate/H+ symporter	1686556..1687866	Pseudomonas mendocina ymp	5108475
YP_001187022.1	CDS	Pmen_1526	NC_009439.1	1687971	1688528	R	hypothetical protein	complement(1687971..1688528)	Pseudomonas mendocina ymp	5108476
YP_001187023.1	CDS	Pmen_1527	NC_009439.1	1688594	1689793	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(1688594..1689793)	Pseudomonas mendocina ymp	5108477
YP_001187024.1	CDS	Pmen_1528	NC_009439.1	1689869	1690792	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(1689869..1690792)	Pseudomonas mendocina ymp	5108478
YP_001187025.1	CDS	Pmen_1529	NC_009439.1	1691143	1692129	D	PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR	1691143..1692129	Pseudomonas mendocina ymp	5108479
YP_001187026.1	CDS	Pmen_1530	NC_009439.1	1692176	1693492	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	1692176..1693492	Pseudomonas mendocina ymp	5108480
YP_001187027.1	CDS	Pmen_1531	NC_009439.1	1693549	1694250	R	PFAM: Glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein	complement(1693549..1694250)	Pseudomonas mendocina ymp	5108481
YP_001187028.1	CDS	Pmen_1532	NC_009439.1	1694426	1694863	D	PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein	1694426..1694863	Pseudomonas mendocina ymp	5108482
YP_001187029.1	CDS	Pmen_1533	NC_009439.1	1694917	1695183	R	hypothetical protein	complement(1694917..1695183)	Pseudomonas mendocina ymp	5108483
YP_001187030.1	CDS	Pmen_1534	NC_009439.1	1695368	1695793	D	hypothetical protein	1695368..1695793	Pseudomonas mendocina ymp	5108484
YP_001187031.1	CDS	Pmen_1535	NC_009439.1	1695874	1697142	D	PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; FAD-binding monooxygenase	1695874..1697142	Pseudomonas mendocina ymp	5108485
YP_001187032.1	CDS	Pmen_1536	NC_009439.1	1697144	1697557	R	hypothetical protein	complement(1697144..1697557)	Pseudomonas mendocina ymp	5108486
YP_001187033.1	CDS	Pmen_1537	NC_009439.1	1697676	1698149	R	hypothetical protein	complement(1697676..1698149)	Pseudomonas mendocina ymp	5108487
YP_001187034.1	CDS	Pmen_1538	NC_009439.1	1698340	1698792	R	hypothetical protein	complement(1698340..1698792)	Pseudomonas mendocina ymp	5108488
YP_001187035.1	CDS	Pmen_1539	NC_009439.1	1698795	1700156	R	hypothetical protein	complement(1698795..1700156)	Pseudomonas mendocina ymp	5108489
YP_001187036.1	CDS	Pmen_1540	NC_009439.1	1700308	1701060	R	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein	complement(1700308..1701060)	Pseudomonas mendocina ymp	5108490
YP_001187037.1	CDS	Pmen_1541	NC_009439.1	1701203	1701769	D	TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC	1701203..1701769	Pseudomonas mendocina ymp	5108491
YP_001187038.1	CDS	Pmen_1542	NC_009439.1	1701771	1702811	D	NAD metabolism ATPase/kinase-like protein	1701771..1702811	Pseudomonas mendocina ymp	5108492
YP_001187039.1	CDS	Pmen_1543	NC_009439.1	1702821	1703558	R	amino acid ABC transporter periplasmic protein	complement(1702821..1703558)	Pseudomonas mendocina ymp	5108493
YP_001187040.1	CDS	Pmen_1544	NC_009439.1	1703558	1705168	R	PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase	complement(1703558..1705168)	Pseudomonas mendocina ymp	5108494
YP_001187041.1	CDS	Pmen_1545	NC_009439.1	1705399	1706526	D	catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase	1705399..1706526	Pseudomonas mendocina ymp	5108495
YP_001187042.1	CDS	Pmen_1546	NC_009439.1	1706598	1707200	D	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor	1706598..1707200	Pseudomonas mendocina ymp	5108496
YP_001187043.1	CDS	Pmen_1547	NC_009439.1	1707194	1707343	D	hypothetical protein	1707194..1707343	Pseudomonas mendocina ymp	5108497
YP_001187044.1	CDS	Pmen_1548	NC_009439.1	1707374	1708936	R	PFAM: transposase IS66; transposase IS66	complement(1707374..1708936)	Pseudomonas mendocina ymp	5108498
YP_001187045.1	CDS	Pmen_1549	NC_009439.1	1708956	1709315	R	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	complement(1708956..1709315)	Pseudomonas mendocina ymp	5108499
YP_001187046.1	CDS	Pmen_1550	NC_009439.1	1709312	1709578	R	hypothetical protein	complement(1709312..1709578)	Pseudomonas mendocina ymp	5108500
YP_001187047.1	CDS	Pmen_1551	NC_009439.1	1709739	1710485	R	hypothetical protein	complement(1709739..1710485)	Pseudomonas mendocina ymp	5108501
YP_001187048.1	CDS	Pmen_1552	NC_009439.1	1710624	1711286	R	hypothetical protein	complement(1710624..1711286)	Pseudomonas mendocina ymp	5108502
YP_001187049.1	CDS	Pmen_1553	NC_009439.1	1711818	1712111	D	hypothetical protein	1711818..1712111	Pseudomonas mendocina ymp	5108503
YP_001187050.1	CDS	Pmen_1554	NC_009439.1	1712133	1712975	D	PFAM: protein of unknown function DUF692; hypothetical protein	1712133..1712975	Pseudomonas mendocina ymp	5108504
YP_001187051.1	CDS	Pmen_1555	NC_009439.1	1712972	1713682	D	hypothetical protein	1712972..1713682	Pseudomonas mendocina ymp	5108505
YP_001187052.1	CDS	Pmen_1556	NC_009439.1	1713688	1714287	D	PFAM: DoxX family protein; DoxX family protein	1713688..1714287	Pseudomonas mendocina ymp	5108506
YP_001187053.1	CDS	Pmen_1557	NC_009439.1	1714475	1715509	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	complement(1714475..1715509)	Pseudomonas mendocina ymp	5108507
YP_001187054.1	CDS	Pmen_1558	NC_009439.1	1715635	1717230	D	PFAM: FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein	1715635..1717230	Pseudomonas mendocina ymp	5109216
YP_001187055.1	CDS	Pmen_1559	NC_009439.1	1717233	1718804	D	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	1717233..1718804	Pseudomonas mendocina ymp	5109217
YP_001187056.1	CDS	Pmen_1560	NC_009439.1	1718850	1720409	D	PFAM: carbohydrate kinase, FGGY; carbohydrate kinase	1718850..1720409	Pseudomonas mendocina ymp	5109218
YP_001187057.1	CDS	Pmen_1561	NC_009439.1	1720528	1721244	R	PFAM: Pirin domain protein domain protein; Cupin 2, conserved barrel domain protein; pirin domain-containing protein	complement(1720528..1721244)	Pseudomonas mendocina ymp	5109219
YP_001187058.1	CDS	Pmen_1562	NC_009439.1	1721397	1722299	D	cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase	1721397..1722299	Pseudomonas mendocina ymp	5109220
YP_001187059.1	CDS	Pmen_1563	NC_009439.1	1722308	1722952	R	PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator	complement(1722308..1722952)	Pseudomonas mendocina ymp	5109221
YP_001187060.1	CDS	Pmen_1564	NC_009439.1	1723190	1724257	R	PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase	complement(1723190..1724257)	Pseudomonas mendocina ymp	5109222
YP_001187061.1	CDS	Pmen_1565	NC_009439.1	1724280	1725089	R	PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase	complement(1724280..1725089)	Pseudomonas mendocina ymp	5109223
YP_001187062.1	CDS	Pmen_1566	NC_009439.1	1725089	1725598	R	PFAM: CheW domain protein; putative CheW protein	complement(1725089..1725598)	Pseudomonas mendocina ymp	5109224
YP_001187063.1	CDS	Pmen_1567	NC_009439.1	1725609	1727252	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(1725609..1727252)	Pseudomonas mendocina ymp	5109225
YP_001187064.1	CDS	Pmen_1568	NC_009439.1	1727266	1729485	R	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase	complement(1727266..1729485)	Pseudomonas mendocina ymp	5109226
YP_001187065.1	CDS	Pmen_1569	NC_009439.1	1729499	1729825	R	hypothetical protein	complement(1729499..1729825)	Pseudomonas mendocina ymp	5109227
YP_001187066.1	CDS	Pmen_1570	NC_009439.1	1729827	1730192	R	PFAM: response regulator receiver; response regulator receiver protein	complement(1729827..1730192)	Pseudomonas mendocina ymp	5109228
YP_001187067.1	CDS	Pmen_1571	NC_009439.1	1730214	1731302	R	PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(1730214..1731302)	Pseudomonas mendocina ymp	5109229
YP_001187068.1	CDS	Pmen_1572	NC_009439.1	1731559	1732491	D	PFAM: response regulator receiver; CheW domain protein; CheW protein	1731559..1732491	Pseudomonas mendocina ymp	5109230
YP_001187069.1	CDS	Pmen_1573	NC_009439.1	1732647	1733453	D	PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; MOSC domain-containing protein	1732647..1733453	Pseudomonas mendocina ymp	5109231
YP_001187070.1	CDS	Pmen_1574	NC_009439.1	1733573	1735210	R	hypothetical protein	complement(1733573..1735210)	Pseudomonas mendocina ymp	5109232
YP_001187071.1	CDS	Pmen_1575	NC_009439.1	1735673	1737655	R	PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase	complement(1735673..1737655)	Pseudomonas mendocina ymp	5109233
YP_001187072.1	CDS	Pmen_1576	NC_009439.1	1737890	1739815	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	1737890..1739815	Pseudomonas mendocina ymp	5109234
YP_001187073.1	CDS	Pmen_1577	NC_009439.1	1739834	1740520	D	hypothetical protein	1739834..1740520	Pseudomonas mendocina ymp	5109235
YP_001187074.1	CDS	Pmen_1578	NC_009439.1	1740613	1741062	R	PFAM: UspA domain protein; UspA domain-containing protein	complement(1740613..1741062)	Pseudomonas mendocina ymp	5109236
YP_001187075.1	CDS	Pmen_1579	NC_009439.1	1741214	1742035	R	hypothetical protein	complement(1741214..1742035)	Pseudomonas mendocina ymp	5109237
YP_001187076.1	CDS	fadB	NC_009439.1	1742502	1744649	D	includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha	1742502..1744649	Pseudomonas mendocina ymp	5109238
YP_001187077.1	CDS	fadA	NC_009439.1	1744680	1745855	D	FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase	1744680..1745855	Pseudomonas mendocina ymp	5109239
YP_001187078.1	CDS	Pmen_1582	NC_009439.1	1745929	1746171	D	PFAM: protein of unknown function DUF1653; hypothetical protein	1745929..1746171	Pseudomonas mendocina ymp	5109240
YP_001187079.1	CDS	Pmen_1583	NC_009439.1	1746276	1748882	D	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I	1746276..1748882	Pseudomonas mendocina ymp	5109241
YP_001187080.1	CDS	Pmen_1584	NC_009439.1	1749040	1749558	D	hypothetical protein	1749040..1749558	Pseudomonas mendocina ymp	5109242
YP_001187081.1	CDS	Pmen_1585	NC_009439.1	1749639	1749875	D	hypothetical protein	1749639..1749875	Pseudomonas mendocina ymp	5109243
YP_001187082.1	CDS	Pmen_1586	NC_009439.1	1749941	1750411	R	SOS cell division inhibitor SulA	complement(1749941..1750411)	Pseudomonas mendocina ymp	5109244
YP_001187083.1	CDS	Pmen_1587	NC_009439.1	1750421	1751035	R	Represses a number of genes involved in the response to DNA damage; LexA repressor	complement(1750421..1751035)	Pseudomonas mendocina ymp	5109245
YP_001187084.1	CDS	Pmen_1588	NC_009439.1	1751264	1751971	D	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	1751264..1751971	Pseudomonas mendocina ymp	5109246
YP_001187085.1	CDS	Pmen_1589	NC_009439.1	1752019	1752543	D	PFAM: ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein	1752019..1752543	Pseudomonas mendocina ymp	5109247
YP_001187086.1	CDS	Pmen_1590	NC_009439.1	1752554	1753564	D	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase	1752554..1753564	Pseudomonas mendocina ymp	5109248
YP_001187087.1	CDS	Pmen_1591	NC_009439.1	1753575	1754312	D	Catalyzes the phosphorolytic cleavage of 6-oxopurine nucleosides; 5'-methylthioadenosine phosphorylase	1753575..1754312	Pseudomonas mendocina ymp	5109249
YP_001187088.1	CDS	Pmen_1592	NC_009439.1	1754365	1754886	R	hypothetical protein	complement(1754365..1754886)	Pseudomonas mendocina ymp	5109250
YP_001187089.1	CDS	Pmen_1593	NC_009439.1	1754898	1758335	R	TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor	complement(1754898..1758335)	Pseudomonas mendocina ymp	5109251
YP_001187090.1	CDS	Pmen_1594	NC_009439.1	1758467	1759933	D	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase	1758467..1759933	Pseudomonas mendocina ymp	5109252
YP_001187091.1	CDS	Pmen_1595	NC_009439.1	1760253	1761590	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A	1760253..1761590	Pseudomonas mendocina ymp	5109253
YP_001187092.1	CDS	Pmen_1596	NC_009439.1	1761594	1762805	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B	1761594..1762805	Pseudomonas mendocina ymp	5109254
YP_001187093.1	CDS	Pmen_1597	NC_009439.1	1762798	1763586	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C	1762798..1763586	Pseudomonas mendocina ymp	5109255
YP_001187094.1	CDS	Pmen_1598	NC_009439.1	1763589	1764257	D	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D	1763589..1764257	Pseudomonas mendocina ymp	5109256
YP_001187095.1	CDS	Pmen_1599	NC_009439.1	1764257	1764865	D	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E	1764257..1764865	Pseudomonas mendocina ymp	5109257
YP_001187096.1	CDS	Pmen_1600	NC_009439.1	1764881	1766104	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F	1764881..1766104	Pseudomonas mendocina ymp	5109258
YP_001187097.1	CDS	Pmen_1601	NC_009439.1	1766108	1767133	D	PFAM: ApbE family lipoprotein; ApbE family lipoprotein	1766108..1767133	Pseudomonas mendocina ymp	5109259
YP_001187098.1	CDS	Pmen_1602	NC_009439.1	1767130	1767360	D	PFAM: protein of unknown function DUF539; hypothetical protein	1767130..1767360	Pseudomonas mendocina ymp	5109260
YP_001187099.1	CDS	Pmen_1603	NC_009439.1	1767457	1768851	D	catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase	1767457..1768851	Pseudomonas mendocina ymp	5109261
YP_001187100.1	CDS	Pmen_1604	NC_009439.1	1769114	1769833	R	PFAM: glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase	complement(1769114..1769833)	Pseudomonas mendocina ymp	5109262
YP_001187101.1	CDS	Pmen_1605	NC_009439.1	1769830	1770138	R	hypothetical protein	complement(1769830..1770138)	Pseudomonas mendocina ymp	5109263
YP_001187102.1	CDS	Pmen_1606	NC_009439.1	1770158	1770724	R	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	complement(1770158..1770724)	Pseudomonas mendocina ymp	5109264
YP_001187103.1	CDS	Pmen_1607	NC_009439.1	1771021	1772268	D	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; LolC/E family lipoprotein releasing system, transmembrane protein	1771021..1772268	Pseudomonas mendocina ymp	5109265
YP_001187104.1	CDS	Pmen_1608	NC_009439.1	1772261	1772974	D	TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein	1772261..1772974	Pseudomonas mendocina ymp	5109266
YP_001187105.1	CDS	Pmen_1609	NC_009439.1	1772974	1774218	D	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; LolC/E family lipoprotein releasing system, transmembrane protein	1772974..1774218	Pseudomonas mendocina ymp	5109267
YP_001187106.1	CDS	Pmen_1610	NC_009439.1	1774253	1774780	R	hypothetical protein	complement(1774253..1774780)	Pseudomonas mendocina ymp	5109268
YP_001187107.1	CDS	Pmen_1611	NC_009439.1	1774908	1777133	D	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2	1774908..1777133	Pseudomonas mendocina ymp	5109269
YP_001187108.1	CDS	Pmen_1612	NC_009439.1	1777206	1777838	D	PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel	1777206..1777838	Pseudomonas mendocina ymp	5109270
YP_001187109.1	CDS	Pmen_1613	NC_009439.1	1777835	1778263	D	PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR	1777835..1778263	Pseudomonas mendocina ymp	5109271
YP_001187110.1	CDS	lpxK	NC_009439.1	1778264	1779265	D	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase	1778264..1779265	Pseudomonas mendocina ymp	5109272
YP_001187111.1	CDS	Pmen_1615	NC_009439.1	1779288	1779473	D	PFAM: protein of unknown function DUF343; hypothetical protein	1779288..1779473	Pseudomonas mendocina ymp	5109273
YP_001187112.1	CDS	Pmen_1616	NC_009439.1	1779474	1780238	D	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase	1779474..1780238	Pseudomonas mendocina ymp	5109274
YP_001187113.1	CDS	Pmen_1617	NC_009439.1	1780238	1780702	D	PFAM: low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase	1780238..1780702	Pseudomonas mendocina ymp	5109275
YP_001187114.1	CDS	murB	NC_009439.1	1780699	1781718	D	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase	1780699..1781718	Pseudomonas mendocina ymp	5109276
YP_001187115.1	CDS	Pmen_1619	NC_009439.1	1781834	1784872	R	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; RNAse E	complement(1781834..1784872)	Pseudomonas mendocina ymp	5109277
YP_001187116.1	CDS	Pmen_1620	NC_009439.1	1785405	1786403	D	TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase C	1785405..1786403	Pseudomonas mendocina ymp	5109278
YP_001187117.1	CDS	Pmen_1621	NC_009439.1	1786396	1787091	D	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase	1786396..1787091	Pseudomonas mendocina ymp	5109279
YP_001187118.1	CDS	Pmen_1622	NC_009439.1	1787081	1788061	D	TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type	1787081..1788061	Pseudomonas mendocina ymp	5109280
YP_001187119.1	CDS	Pmen_1623	NC_009439.1	1788110	1788691	R	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein	complement(1788110..1788691)	Pseudomonas mendocina ymp	5109281
YP_001187120.1	CDS	Pmen_1624	NC_009439.1	1788802	1789329	D	PFAM: protein of unknown function DUF177; hypothetical protein	1788802..1789329	Pseudomonas mendocina ymp	5109282
YP_001187121.1	CDS	rpmF	NC_009439.1	1789343	1789525	D	some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32	1789343..1789525	Pseudomonas mendocina ymp	5109283
YP_001187122.1	CDS	Pmen_1626	NC_009439.1	1789559	1790539	D	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX	1789559..1790539	Pseudomonas mendocina ymp	5109284
YP_001187123.1	CDS	Pmen_1627	NC_009439.1	1790665	1791603	D	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; ACP S-malonyltransferase	1790665..1791603	Pseudomonas mendocina ymp	5109285
YP_001187124.1	CDS	fabG	NC_009439.1	1791627	1792370	D	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	1791627..1792370	Pseudomonas mendocina ymp	5109286
YP_001187125.1	CDS	acpP	NC_009439.1	1792601	1792837	D	carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein	1792601..1792837	Pseudomonas mendocina ymp	5109287
YP_001187126.1	CDS	Pmen_1630	NC_009439.1	1792948	1794192	D	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II	1792948..1794192	Pseudomonas mendocina ymp	5109288
YP_001187127.1	CDS	Pmen_1631	NC_009439.1	1794192	1795007	D	catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase	1794192..1795007	Pseudomonas mendocina ymp	5109289
YP_001187128.1	CDS	Pmen_1632	NC_009439.1	1795011	1796066	D	PFAM: aminodeoxychorismate lyase; aminodeoxychorismate lyase	1795011..1796066	Pseudomonas mendocina ymp	5109290
YP_001187129.1	CDS	tmk	NC_009439.1	1796076	1796708	D	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase	1796076..1796708	Pseudomonas mendocina ymp	5109291
YP_001187130.1	CDS	Pmen_1634	NC_009439.1	1796701	1797693	D	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta'	1796701..1797693	Pseudomonas mendocina ymp	5109292
YP_001187131.1	CDS	Pmen_1635	NC_009439.1	1797819	1798175	D	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	1797819..1798175	Pseudomonas mendocina ymp	5109293
YP_001187132.1	CDS	Pmen_1636	NC_009439.1	1798210	1799073	D	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase	1798210..1799073	Pseudomonas mendocina ymp	5109294
YP_001187133.1	CDS	Pmen_1637	NC_009439.1	1799426	1800559	R	PFAM: aminotransferase, class V; class V aminotransferase	complement(1799426..1800559)	Pseudomonas mendocina ymp	5109611
YP_001187134.1	CDS	Pmen_1638	NC_009439.1	1800635	1801255	D	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	1800635..1801255	Pseudomonas mendocina ymp	5109612
YP_001187135.1	CDS	Pmen_1639	NC_009439.1	1801389	1802357	D	PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor synthesis domain-containing protein	1801389..1802357	Pseudomonas mendocina ymp	5109613
YP_001187136.1	CDS	Pmen_1640	NC_009439.1	1802588	1803481	D	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein	1802588..1803481	Pseudomonas mendocina ymp	5109614
YP_001187137.1	CDS	Pmen_1641	NC_009439.1	1803555	1804157	D	hypothetical protein	1803555..1804157	Pseudomonas mendocina ymp	5109615
YP_001187138.1	CDS	Pmen_1642	NC_009439.1	1804318	1804887	D	PFAM: protein of unknown function DUF1285; hypothetical protein	1804318..1804887	Pseudomonas mendocina ymp	5109616
YP_001187139.1	CDS	Pmen_1643	NC_009439.1	1804952	1805482	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	1804952..1805482	Pseudomonas mendocina ymp	5109617
YP_001187140.1	CDS	Pmen_1644	NC_009439.1	1805479	1805802	D	protein tyrosine phosphatase-like protein	1805479..1805802	Pseudomonas mendocina ymp	5109618
YP_001187141.1	CDS	Pmen_1645	NC_009439.1	1805813	1807585	R	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin	complement(1805813..1807585)	Pseudomonas mendocina ymp	5109619
YP_001187142.1	CDS	Pmen_1646	NC_009439.1	1807780	1809657	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase	1807780..1809657	Pseudomonas mendocina ymp	5109620
YP_001187143.1	CDS	Pmen_1647	NC_009439.1	1809749	1810309	R	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; PfpI family intracellular peptidase	complement(1809749..1810309)	Pseudomonas mendocina ymp	5109621
YP_001187144.1	CDS	Pmen_1648	NC_009439.1	1810505	1811050	R	hypothetical protein	complement(1810505..1811050)	Pseudomonas mendocina ymp	5109622
YP_001187145.1	CDS	Pmen_1649	NC_009439.1	1811650	1811994	D	hypothetical protein	1811650..1811994	Pseudomonas mendocina ymp	5109623
YP_001187146.1	CDS	Pmen_1650	NC_009439.1	1812089	1813039	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	complement(1812089..1813039)	Pseudomonas mendocina ymp	5109624
YP_001187147.1	CDS	Pmen_1651	NC_009439.1	1813264	1814028	D	PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	1813264..1814028	Pseudomonas mendocina ymp	5109625
YP_001187148.1	CDS	Pmen_1652	NC_009439.1	1814226	1815497	D	hypothetical protein	1814226..1815497	Pseudomonas mendocina ymp	5109626
YP_001187149.1	CDS	Pmen_1653	NC_009439.1	1815543	1816631	R	PFAM: protein of unknown function UPF0118; hypothetical protein	complement(1815543..1816631)	Pseudomonas mendocina ymp	5109627
YP_001187150.1	CDS	Pmen_1654	NC_009439.1	1816772	1817482	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase	1816772..1817482	Pseudomonas mendocina ymp	5109628
YP_001187151.1	CDS	Pmen_1655	NC_009439.1	1817492	1817884	R	PFAM: glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein	complement(1817492..1817884)	Pseudomonas mendocina ymp	5109629
YP_001187152.1	CDS	Pmen_1656	NC_009439.1	1818056	1818448	D	hypothetical protein	1818056..1818448	Pseudomonas mendocina ymp	5109630
YP_001187153.1	CDS	Pmen_1657	NC_009439.1	1818602	1820305	D	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase	1818602..1820305	Pseudomonas mendocina ymp	5109631
YP_001187154.1	CDS	Pmen_1658	NC_009439.1	1820353	1821786	R	PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p	complement(1820353..1821786)	Pseudomonas mendocina ymp	5109632
YP_001187155.1	CDS	Pmen_1659	NC_009439.1	1821894	1822133	D	PFAM: SirA family protein; SirA family protein	1821894..1822133	Pseudomonas mendocina ymp	5109633
YP_001187156.1	CDS	Pmen_1660	NC_009439.1	1822245	1823315	D	PFAM: protein of unknown function UPF0118; hypothetical protein	1822245..1823315	Pseudomonas mendocina ymp	5109634
YP_001187157.1	CDS	Pmen_1661	NC_009439.1	1823368	1823841	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase	complement(1823368..1823841)	Pseudomonas mendocina ymp	5109635
YP_001187158.1	CDS	Pmen_1662	NC_009439.1	1823864	1824421	R	glycine cleavage system regulatory protein-like protein	complement(1823864..1824421)	Pseudomonas mendocina ymp	5109636
YP_001187159.1	CDS	Pmen_1663	NC_009439.1	1824627	1825505	D	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase	1824627..1825505	Pseudomonas mendocina ymp	5109637
YP_001187160.1	CDS	Pmen_1664	NC_009439.1	1825522	1826643	D	hypothetical protein	1825522..1826643	Pseudomonas mendocina ymp	5109638
YP_001187161.1	CDS	Pmen_1665	NC_009439.1	1826731	1827600	D	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase	1826731..1827600	Pseudomonas mendocina ymp	5109639
YP_001187162.1	CDS	Pmen_1666	NC_009439.1	1828235	1828915	D	hypothetical protein	1828235..1828915	Pseudomonas mendocina ymp	5106567
YP_001187163.1	CDS	Pmen_1667	NC_009439.1	1828987	1830468	R	hypothetical protein	complement(1828987..1830468)	Pseudomonas mendocina ymp	5109641
YP_001187164.1	CDS	algL	NC_009439.1	1830483	1831598	R	Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export; poly(beta-D-mannuronate) lyase	complement(1830483..1831598)	Pseudomonas mendocina ymp	5109642
YP_001187165.1	CDS	Pmen_1669	NC_009439.1	1831589	1833007	R	hypothetical protein	complement(1831589..1833007)	Pseudomonas mendocina ymp	5109643
YP_001187166.1	CDS	Pmen_1670	NC_009439.1	1833042	1833683	R	hypothetical protein	complement(1833042..1833683)	Pseudomonas mendocina ymp	5109644
YP_001187167.1	CDS	Pmen_1671	NC_009439.1	1833699	1834805	R	hypothetical protein	complement(1833699..1834805)	Pseudomonas mendocina ymp	5109645
YP_001187168.1	CDS	Pmen_1672	NC_009439.1	1834816	1836249	R	PFAM: membrane bound O-acyl transferase, MBOAT family protein; membrane bound O-acyl transferase, MBOAT family protein	complement(1834816..1836249)	Pseudomonas mendocina ymp	5109646
YP_001187169.1	CDS	Pmen_1673	NC_009439.1	1836267	1837658	R	hypothetical protein	complement(1836267..1837658)	Pseudomonas mendocina ymp	5109647
YP_001187170.1	CDS	Pmen_1674	NC_009439.1	1837655	1839130	R	hypothetical protein	complement(1837655..1839130)	Pseudomonas mendocina ymp	5109648
YP_001187171.1	CDS	Pmen_1675	NC_009439.1	1839138	1840283	R	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	complement(1839138..1840283)	Pseudomonas mendocina ymp	5109649
YP_001187172.1	CDS	Pmen_1676	NC_009439.1	1840301	1841821	R	hypothetical protein	complement(1840301..1841821)	Pseudomonas mendocina ymp	5109650
YP_001187173.1	CDS	Pmen_1677	NC_009439.1	1841882	1843306	R	TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase	complement(1841882..1843306)	Pseudomonas mendocina ymp	5109651
YP_001187174.1	CDS	Pmen_1678	NC_009439.1	1843421	1844731	R	PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; GDP-mannose 6-dehydrogenase	complement(1843421..1844731)	Pseudomonas mendocina ymp	5109652
YP_001187175.1	CDS	Pmen_1679	NC_009439.1	1845636	1848782	R	PFAM: acriflavin resistance protein; acriflavin resistance protein	complement(1845636..1848782)	Pseudomonas mendocina ymp	5109653
YP_001187176.1	CDS	Pmen_1680	NC_009439.1	1848784	1849866	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	complement(1848784..1849866)	Pseudomonas mendocina ymp	5109654
YP_001187177.1	CDS	Pmen_1681	NC_009439.1	1849872	1850522	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(1849872..1850522)	Pseudomonas mendocina ymp	5109655
YP_001187178.1	CDS	Pmen_1682	NC_009439.1	1850777	1851694	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(1850777..1851694)	Pseudomonas mendocina ymp	5109656
YP_001187179.1	CDS	Pmen_1683	NC_009439.1	1851864	1854167	D	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase	1851864..1854167	Pseudomonas mendocina ymp	5109657
YP_001187180.1	CDS	Pmen_1684	NC_009439.1	1854364	1855353	D	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	1854364..1855353	Pseudomonas mendocina ymp	5109658
YP_001187181.1	CDS	Pmen_1685	NC_009439.1	1855366	1855626	R	hypothetical protein	complement(1855366..1855626)	Pseudomonas mendocina ymp	5109659
YP_001187182.1	CDS	Pmen_1686	NC_009439.1	1855905	1856891	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	1855905..1856891	Pseudomonas mendocina ymp	5109660
YP_001187183.1	CDS	Pmen_1687	NC_009439.1	1856879	1857220	D	hypothetical protein	1856879..1857220	Pseudomonas mendocina ymp	5109661
YP_001187184.1	CDS	Pmen_1688	NC_009439.1	1857210	1857827	R	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone)	complement(1857210..1857827)	Pseudomonas mendocina ymp	5109662
YP_001187185.1	CDS	Pmen_1689	NC_009439.1	1857820	1859214	R	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase	complement(1857820..1859214)	Pseudomonas mendocina ymp	5109663
YP_001187186.1	CDS	Pmen_1690	NC_009439.1	1859302	1860312	R	hypothetical protein	complement(1859302..1860312)	Pseudomonas mendocina ymp	5109664
YP_001187187.1	CDS	Pmen_1691	NC_009439.1	1860588	1861085	D	hypothetical protein	1860588..1861085	Pseudomonas mendocina ymp	5109665
YP_001187188.1	CDS	Pmen_1692	NC_009439.1	1861097	1861390	D	PFAM: BolA family protein; transcriptional regulator BolA	1861097..1861390	Pseudomonas mendocina ymp	5109666
YP_001187189.1	CDS	Pmen_1693	NC_009439.1	1861714	1862652	D	PFAM: Rhodanese domain protein; hypothetical protein	1861714..1862652	Pseudomonas mendocina ymp	5109667
YP_001187190.1	CDS	Pmen_1694	NC_009439.1	1862655	1863287	D	PFAM: DSBA oxidoreductase; DSBA oxidoreductase	1862655..1863287	Pseudomonas mendocina ymp	5109668
YP_001187191.1	CDS	Pmen_1695	NC_009439.1	1863280	1865061	D	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	1863280..1865061	Pseudomonas mendocina ymp	5109669
YP_001187192.1	CDS	Pmen_1696	NC_009439.1	1865418	1866500	D	TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase	1865418..1866500	Pseudomonas mendocina ymp	5109670
YP_001187193.1	CDS	Pmen_1697	NC_009439.1	1866505	1867644	D	PFAM: homogentisate 1,2-dioxygenase; homogentisate 1,2-dioxygenase	1866505..1867644	Pseudomonas mendocina ymp	5109671
YP_001187194.1	CDS	Pmen_1698	NC_009439.1	1867860	1868840	D	PFAM: fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase	1867860..1868840	Pseudomonas mendocina ymp	5109672
YP_001187195.1	CDS	Pmen_1699	NC_009439.1	1868907	1869557	D	TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal domain; maleylacetoacetate isomerase	1868907..1869557	Pseudomonas mendocina ymp	5109673
YP_001187196.1	CDS	Pmen_1700	NC_009439.1	1869679	1871139	D	PFAM: sodium:neurotransmitter symporter; sodium:neurotransmitter symporter	1869679..1871139	Pseudomonas mendocina ymp	5109674
YP_001187197.1	CDS	Pmen_1701	NC_009439.1	1871430	1873382	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	1871430..1873382	Pseudomonas mendocina ymp	5109675
YP_001187198.1	CDS	Pmen_1702	NC_009439.1	1873503	1873913	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	complement(1873503..1873913)	Pseudomonas mendocina ymp	5109676
YP_001187199.1	CDS	Pmen_1703	NC_009439.1	1873976	1874278	D	PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase	1873976..1874278	Pseudomonas mendocina ymp	5109677
YP_001187200.1	CDS	Pmen_1704	NC_009439.1	1874290	1875063	R	PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	complement(1874290..1875063)	Pseudomonas mendocina ymp	5109678
YP_001187201.1	CDS	Pmen_1705	NC_009439.1	1875245	1875949	R	PFAM: protein of unknown function UPF0066; hypothetical protein	complement(1875245..1875949)	Pseudomonas mendocina ymp	5109679
YP_001187202.1	CDS	Pmen_1706	NC_009439.1	1875959	1876165	R	hypothetical protein	complement(1875959..1876165)	Pseudomonas mendocina ymp	5109680
YP_001187203.1	CDS	Pmen_1707	NC_009439.1	1876209	1876919	R	PFAM: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein	complement(1876209..1876919)	Pseudomonas mendocina ymp	5109681
YP_001187204.1	CDS	Pmen_1708	NC_009439.1	1876979	1877404	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	complement(1876979..1877404)	Pseudomonas mendocina ymp	5109682
YP_001187205.1	CDS	Pmen_1709	NC_009439.1	1877578	1878729	D	PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase	1877578..1878729	Pseudomonas mendocina ymp	5109683
YP_001187206.1	CDS	nfrB	NC_009439.1	1878726	1880900	D	PFAM: General secretory system II, protein E domain protein; bacteriophage N4 adsorption protein B	1878726..1880900	Pseudomonas mendocina ymp	5109684
YP_001187207.1	CDS	Pmen_1711	NC_009439.1	1880897	1884046	D	bacteriophage N4 receptor, outer membrane subunit	1880897..1884046	Pseudomonas mendocina ymp	5109685
YP_001187208.1	CDS	Pmen_1712	NC_009439.1	1884046	1884882	D	hypothetical protein	1884046..1884882	Pseudomonas mendocina ymp	5109686
YP_001187209.1	CDS	rimO	NC_009439.1	1884936	1886258	R	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase	complement(1884936..1886258)	Pseudomonas mendocina ymp	5109687
YP_001187210.1	CDS	Pmen_1714	NC_009439.1	1886355	1886903	R	PFAM: cytochrome B561; cytochrome B561	complement(1886355..1886903)	Pseudomonas mendocina ymp	5109688
YP_001187211.1	CDS	Pmen_1715	NC_009439.1	1887581	1889545	D	PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein	1887581..1889545	Pseudomonas mendocina ymp	5106569
YP_001187212.1	CDS	Pmen_1716	NC_009439.1	1889645	1891033	R	PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; hypothetical protein	complement(1889645..1891033)	Pseudomonas mendocina ymp	5109296
YP_001187213.1	CDS	Pmen_1717	NC_009439.1	1891148	1891459	R	hypothetical protein	complement(1891148..1891459)	Pseudomonas mendocina ymp	5109297
YP_001187214.1	CDS	Pmen_1718	NC_009439.1	1891452	1891844	R	PFAM: protein of unknown function DUF202; hypothetical protein	complement(1891452..1891844)	Pseudomonas mendocina ymp	5109298
YP_001187215.1	CDS	Pmen_1719	NC_009439.1	1891865	1893232	R	PFAM: protein of unknown function DUF1329; hypothetical protein	complement(1891865..1893232)	Pseudomonas mendocina ymp	5109299
YP_001187216.1	CDS	Pmen_1720	NC_009439.1	1893245	1895026	R	PFAM: protein of unknown function DUF1302; hypothetical protein	complement(1893245..1895026)	Pseudomonas mendocina ymp	5109300
YP_001187217.1	CDS	Pmen_1721	NC_009439.1	1895284	1896252	D	PFAM: regulatory protein, MarR; regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	1895284..1896252	Pseudomonas mendocina ymp	5109301
YP_001187218.1	CDS	Pmen_1722	NC_009439.1	1896216	1897517	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(1896216..1897517)	Pseudomonas mendocina ymp	5109302
YP_001187219.1	CDS	Pmen_1723	NC_009439.1	1897589	1898752	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	complement(1897589..1898752)	Pseudomonas mendocina ymp	5109303
YP_001187220.1	CDS	Pmen_1724	NC_009439.1	1898763	1900310	R	PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase	complement(1898763..1900310)	Pseudomonas mendocina ymp	5109304
YP_001187221.1	CDS	Pmen_1725	NC_009439.1	1900578	1901762	R	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase	complement(1900578..1901762)	Pseudomonas mendocina ymp	5109305
YP_001187222.1	CDS	Pmen_1726	NC_009439.1	1901995	1903053	D	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV	1901995..1903053	Pseudomonas mendocina ymp	5109306
YP_001187223.1	CDS	Pmen_1727	NC_009439.1	1903148	1903546	R	PFAM: protein of unknown function DUF306, Meta and HslJ; hypothetical protein	complement(1903148..1903546)	Pseudomonas mendocina ymp	5109307
YP_001187224.1	CDS	Pmen_1728	NC_009439.1	1903551	1903982	R	hypothetical protein	complement(1903551..1903982)	Pseudomonas mendocina ymp	5109308
YP_001187225.1	CDS	Pmen_1729	NC_009439.1	1904010	1905005	R	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase	complement(1904010..1905005)	Pseudomonas mendocina ymp	5109309
YP_001187226.1	CDS	Pmen_1730	NC_009439.1	1905015	1907765	R	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; multi-sensor hybrid histidine kinase	complement(1905015..1907765)	Pseudomonas mendocina ymp	5109310
YP_001187227.1	CDS	Pmen_1731	NC_009439.1	1907883	1908593	D	PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	1907883..1908593	Pseudomonas mendocina ymp	5109311
YP_001187228.1	CDS	Pmen_1732	NC_009439.1	1908590	1909927	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	1908590..1909927	Pseudomonas mendocina ymp	5109312
YP_001187229.1	CDS	cysM	NC_009439.1	1910027	1910932	D	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B	1910027..1910932	Pseudomonas mendocina ymp	5109313
YP_001187230.1	CDS	rumA	NC_009439.1	1910932	1912284	D	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase	1910932..1912284	Pseudomonas mendocina ymp	5109314
YP_001187231.1	CDS	Pmen_1735	NC_009439.1	1912412	1914655	D	TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I SpoT/RelA	1912412..1914655	Pseudomonas mendocina ymp	5109315
YP_001187232.1	CDS	mazG	NC_009439.1	1914668	1915498	D	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase	1914668..1915498	Pseudomonas mendocina ymp	5109316
YP_001187233.1	CDS	Pmen_1737	NC_009439.1	1915675	1916214	D	hypothetical protein	1915675..1916214	Pseudomonas mendocina ymp	5109317
YP_001187234.1	CDS	Pmen_1738	NC_009439.1	1916318	1916590	R	PFAM: Modulator of Rho-dependent transcription termination; transcriptional antiterminator Rof	complement(1916318..1916590)	Pseudomonas mendocina ymp	5109318
YP_001187235.1	CDS	Pmen_1739	NC_009439.1	1916736	1917983	R	PFAM: outer membrane porin; outer membrane porin	complement(1916736..1917983)	Pseudomonas mendocina ymp	5109319
YP_001187236.1	CDS	Pmen_1740	NC_009439.1	1918304	1919443	D	hypothetical protein	1918304..1919443	Pseudomonas mendocina ymp	5109320
YP_001187237.1	CDS	Pmen_1741	NC_009439.1	1919492	1919728	D	PFAM: glutaredoxin 2; glutaredoxin	1919492..1919728	Pseudomonas mendocina ymp	5109321
YP_001187238.1	CDS	Pmen_1742	NC_009439.1	1920001	1920222	R	PFAM: protein of unknown function DUF903; hypothetical protein	complement(1920001..1920222)	Pseudomonas mendocina ymp	5106570
YP_001187239.1	CDS	mobA	NC_009439.1	1920290	1920895	R	in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA	complement(1920290..1920895)	Pseudomonas mendocina ymp	5109323
YP_001187240.1	CDS	Pmen_1744	NC_009439.1	1920963	1921502	D	TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; molybdenum cofactor biosynthesis protein B	1920963..1921502	Pseudomonas mendocina ymp	5109324
YP_001187241.1	CDS	Pmen_1745	NC_009439.1	1921499	1922713	D	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; molybdopterin molybdochelatase	1921499..1922713	Pseudomonas mendocina ymp	5109325
YP_001187242.1	CDS	Pmen_1746	NC_009439.1	1922863	1923474	D	PFAM: NLP/P60 protein; NLP/P60 protein	1922863..1923474	Pseudomonas mendocina ymp	5109326
YP_001187243.1	CDS	Pmen_1747	NC_009439.1	1923559	1924083	D	PFAM: NLP/P60 protein; NLP/P60 protein	1923559..1924083	Pseudomonas mendocina ymp	5109327
YP_001187244.1	CDS	Pmen_1748	NC_009439.1	1924091	1924750	D	PFAM: O-methyltransferase, family 3; caffeoyl-CoA O-methyltransferase	1924091..1924750	Pseudomonas mendocina ymp	5109328
YP_001187245.1	CDS	Pmen_1749	NC_009439.1	1924757	1925077	D	hypothetical protein	1924757..1925077	Pseudomonas mendocina ymp	5109329
YP_001187246.1	CDS	Pmen_1750	NC_009439.1	1925506	1926117	D	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase	1925506..1926117	Pseudomonas mendocina ymp	5109330
YP_001187247.1	CDS	Pmen_1751	NC_009439.1	1926117	1927409	D	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase	1926117..1927409	Pseudomonas mendocina ymp	5109331
YP_001187248.1	CDS	Pmen_1752	NC_009439.1	1927406	1928059	D	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase	1927406..1928059	Pseudomonas mendocina ymp	5109332
YP_001187249.1	CDS	cobD	NC_009439.1	1928063	1928971	D	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein	1928063..1928971	Pseudomonas mendocina ymp	5109333
YP_001187250.1	CDS	Pmen_1754	NC_009439.1	1928964	1929974	D	cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase	1928964..1929974	Pseudomonas mendocina ymp	5109334
YP_001187251.1	CDS	Pmen_1755	NC_009439.1	1929974	1931425	D	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase	1929974..1931425	Pseudomonas mendocina ymp	5109335
YP_001187252.1	CDS	cobU	NC_009439.1	1931494	1932015	D	catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	1931494..1932015	Pseudomonas mendocina ymp	5109336
YP_001187253.1	CDS	cobT	NC_009439.1	1932012	1933067	D	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	1932012..1933067	Pseudomonas mendocina ymp	5109337
YP_001187254.1	CDS	Pmen_1758	NC_009439.1	1933067	1933639	D	PFAM: Phosphoglycerate mutase; phosphoglycerate mutase	1933067..1933639	Pseudomonas mendocina ymp	5109338
YP_001187255.1	CDS	cobS	NC_009439.1	1933636	1934367	D	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase	1933636..1934367	Pseudomonas mendocina ymp	5109339
YP_001187256.1	CDS	Pmen_1760	NC_009439.1	1934441	1934845	D	PFAM: regulatory protein, MarR; MarR family transcriptional regulator	1934441..1934845	Pseudomonas mendocina ymp	5109340
YP_001187257.1	CDS	Pmen_1761	NC_009439.1	1934898	1936103	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	1934898..1936103	Pseudomonas mendocina ymp	5109341
YP_001187258.1	CDS	Pmen_1762	NC_009439.1	1936288	1936839	D	PFAM: glutathione peroxidase; Redoxin domain protein; glutathione peroxidase	1936288..1936839	Pseudomonas mendocina ymp	5109342
YP_001187259.1	CDS	Pmen_1763	NC_009439.1	1936962	1937888	D	alpha/beta hydrolase fold-like protein	1936962..1937888	Pseudomonas mendocina ymp	5109343
YP_001187260.1	CDS	Pmen_1764	NC_009439.1	1937931	1938989	D	PFAM: lipase chaperone; lipase chaperone	1937931..1938989	Pseudomonas mendocina ymp	5109344
YP_001187261.1	CDS	Pmen_1765	NC_009439.1	1939002	1940762	D	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor hybrid histidine kinase	1939002..1940762	Pseudomonas mendocina ymp	5109345
YP_001187262.1	CDS	Pmen_1766	NC_009439.1	1940767	1941378	R	PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator	complement(1940767..1941378)	Pseudomonas mendocina ymp	5109346
YP_001187263.1	CDS	Pmen_1767	NC_009439.1	1941443	1942717	R	PFAM: membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein	complement(1941443..1942717)	Pseudomonas mendocina ymp	5109347
YP_001187264.1	CDS	Pmen_1768	NC_009439.1	1942861	1943340	R	hypothetical protein	complement(1942861..1943340)	Pseudomonas mendocina ymp	5109348
YP_001187265.1	CDS	Pmen_1769	NC_009439.1	1943537	1944391	R	PFAM: Rhodanese domain protein; rhodanese domain-containing protein	complement(1943537..1944391)	Pseudomonas mendocina ymp	5109349
YP_001187266.1	CDS	Pmen_1770	NC_009439.1	1944489	1945289	D	PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase	1944489..1945289	Pseudomonas mendocina ymp	5109350
YP_001187267.1	CDS	Pmen_1771	NC_009439.1	1945464	1946801	D	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase	1945464..1946801	Pseudomonas mendocina ymp	5109351
YP_001187268.1	CDS	Pmen_1772	NC_009439.1	1946851	1947915	R	PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; gluconolactonase	complement(1946851..1947915)	Pseudomonas mendocina ymp	5109352
YP_001187269.1	CDS	Pmen_1773	NC_009439.1	1948040	1949173	D	TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; ribonuclease D	1948040..1949173	Pseudomonas mendocina ymp	5109353
YP_001187270.1	CDS	Pmen_1774	NC_009439.1	1949170	1949463	D	PFAM: protein of unknown function DUF709; hypothetical protein	1949170..1949463	Pseudomonas mendocina ymp	5109354
YP_001187271.1	CDS	Pmen_1775	NC_009439.1	1949467	1950399	D	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase	1949467..1950399	Pseudomonas mendocina ymp	5109355
YP_001187272.1	CDS	Pmen_1776	NC_009439.1	1950487	1950936	D	PFAM: protein of unknown function UPF0153; hypothetical protein	1950487..1950936	Pseudomonas mendocina ymp	5109356
YP_001187273.1	CDS	Pmen_1777	NC_009439.1	1951004	1952275	D	hypothetical protein	1951004..1952275	Pseudomonas mendocina ymp	5109357
YP_001187274.1	CDS	Pmen_1778	NC_009439.1	1952324	1952674	R	PFAM: HNH endonuclease; SMART: HNH nuclease; hypothetical protein	complement(1952324..1952674)	Pseudomonas mendocina ymp	5109358
YP_001187275.1	CDS	Pmen_1779	NC_009439.1	1952751	1953062	D	hypothetical protein	1952751..1953062	Pseudomonas mendocina ymp	5109359
YP_001187276.1	CDS	Pmen_1780	NC_009439.1	1953091	1953561	R	PFAM: cyclic nucleotide-binding; cyclic nucleotide-binding protein	complement(1953091..1953561)	Pseudomonas mendocina ymp	5109360
YP_001187277.1	CDS	Pmen_1781	NC_009439.1	1953667	1955703	R	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; oligopeptidase B	complement(1953667..1955703)	Pseudomonas mendocina ymp	5109361
YP_001187278.1	CDS	Pmen_1782	NC_009439.1	1955811	1956281	D	hypothetical protein	1955811..1956281	Pseudomonas mendocina ymp	5109362
YP_001187279.1	CDS	Pmen_1783	NC_009439.1	1956338	1956784	D	PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein	1956338..1956784	Pseudomonas mendocina ymp	5109363
YP_001187280.1	CDS	Pmen_1784	NC_009439.1	1956789	1957562	D	PFAM: glutamine amidotransferase, class-II; glutamine amidotransferase, class-II	1956789..1957562	Pseudomonas mendocina ymp	5109364
YP_001187281.1	CDS	Pmen_1785	NC_009439.1	1957576	1958100	D	hypothetical protein	1957576..1958100	Pseudomonas mendocina ymp	5109365
YP_001187282.1	CDS	Pmen_1786	NC_009439.1	1958247	1959293	D	hypothetical protein	1958247..1959293	Pseudomonas mendocina ymp	5109366
YP_001187283.1	CDS	Pmen_1787	NC_009439.1	1959421	1960599	R	hypothetical protein	complement(1959421..1960599)	Pseudomonas mendocina ymp	5109367
YP_001187284.1	CDS	Pmen_1788	NC_009439.1	1960776	1961621	R	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase	complement(1960776..1961621)	Pseudomonas mendocina ymp	5109368
YP_001187285.1	CDS	Pmen_1789	NC_009439.1	1961781	1962875	R	hypothetical protein	complement(1961781..1962875)	Pseudomonas mendocina ymp	5109369
YP_001187286.1	CDS	Pmen_1790	NC_009439.1	1962991	1963962	D	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase	1962991..1963962	Pseudomonas mendocina ymp	5109370
YP_001187287.1	CDS	Pmen_1791	NC_009439.1	1964196	1965086	R	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	complement(1964196..1965086)	Pseudomonas mendocina ymp	5109371
YP_001187288.1	CDS	aceK	NC_009439.1	1965296	1967014	D	catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein	1965296..1967014	Pseudomonas mendocina ymp	5109372
YP_001187289.1	CDS	Pmen_1793	NC_009439.1	1967252	1967983	R	PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein	complement(1967252..1967983)	Pseudomonas mendocina ymp	5109373
YP_001187290.1	CDS	Pmen_1794	NC_009439.1	1968177	1969517	R	PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease	complement(1968177..1969517)	Pseudomonas mendocina ymp	5109924
YP_001187291.1	CDS	Pmen_1795	NC_009439.1	1969623	1971257	R	PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; hypothetical protein	complement(1969623..1971257)	Pseudomonas mendocina ymp	5109925
YP_001187292.1	CDS	Pmen_1796	NC_009439.1	1971297	1972691	R	PFAM: nucleoside recognition domain protein; nucleoside recognition domain-containing protein	complement(1971297..1972691)	Pseudomonas mendocina ymp	5109926
YP_001187293.1	CDS	Pmen_1797	NC_009439.1	1972770	1973729	R	TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; putative agmatinase	complement(1972770..1973729)	Pseudomonas mendocina ymp	5109927
YP_001187294.1	CDS	Pmen_1798	NC_009439.1	1973972	1975534	D	PFAM: EAL domain protein; diguanylate phosphodiesterase	1973972..1975534	Pseudomonas mendocina ymp	5109928
YP_001187295.1	CDS	Pmen_1799	NC_009439.1	1975544	1976443	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	1975544..1976443	Pseudomonas mendocina ymp	5109929
YP_001187296.1	CDS	Pmen_1800	NC_009439.1	1976563	1978128	D	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; methyl-accepting chemotaxis sensory transducer	1976563..1978128	Pseudomonas mendocina ymp	5109930
YP_001187297.1	CDS	Pmen_1801	NC_009439.1	1978315	1978908	D	PFAM: DTW domain containing protein; DTW domain-containing protein	1978315..1978908	Pseudomonas mendocina ymp	5109931
YP_001187298.1	CDS	Pmen_1802	NC_009439.1	1979108	1980466	R	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein	complement(1979108..1980466)	Pseudomonas mendocina ymp	5109932
YP_001187299.1	CDS	Pmen_1803	NC_009439.1	1980479	1982629	R	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(1980479..1982629)	Pseudomonas mendocina ymp	5109933
YP_001187300.1	CDS	Pmen_1804	NC_009439.1	1982663	1984018	R	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion outer membrane protein	complement(1982663..1984018)	Pseudomonas mendocina ymp	5109934
YP_001187301.1	CDS	Pmen_1805	NC_009439.1	1984366	1984632	R	hypothetical protein	complement(1984366..1984632)	Pseudomonas mendocina ymp	5109935
YP_001187302.1	CDS	Pmen_1806	NC_009439.1	1984657	1994211	D	PFAM: Hemolysin-type calcium-binding region; von Willebrand factor, type A; hemolysin-type calcium-binding protein	1984657..1994211	Pseudomonas mendocina ymp	5109936
YP_001187303.1	CDS	Pmen_1807	NC_009439.1	1994334	1994675	D	hypothetical protein	1994334..1994675	Pseudomonas mendocina ymp	5109937
YP_001187304.1	CDS	Pmen_1808	NC_009439.1	1994731	1996683	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; diguanylate cyclase/phosphodiesterase	complement(1994731..1996683)	Pseudomonas mendocina ymp	5109938
YP_001187305.1	CDS	Pmen_1809	NC_009439.1	1996869	1997549	R	hypothetical protein	complement(1996869..1997549)	Pseudomonas mendocina ymp	5109939
YP_001187306.1	CDS	Pmen_1810	NC_009439.1	1997712	1998110	R	PFAM: protein of unknown function DUF454; hypothetical protein	complement(1997712..1998110)	Pseudomonas mendocina ymp	5109940
YP_001187307.1	CDS	Pmen_1811	NC_009439.1	1998160	1998747	R	TIGRFAM: yecA family protein; yecA family protein	complement(1998160..1998747)	Pseudomonas mendocina ymp	5109941
YP_001187308.1	CDS	Pmen_1812	NC_009439.1	1998913	2001045	D	TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ	1998913..2001045	Pseudomonas mendocina ymp	5109942
YP_001187309.1	CDS	Pmen_1813	NC_009439.1	2001127	2002287	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	2001127..2002287	Pseudomonas mendocina ymp	5109943
YP_001187310.1	CDS	Pmen_1814	NC_009439.1	2002434	2002865	D	PFAM: regulatory protein, MarR; MarR family transcriptional regulator	2002434..2002865	Pseudomonas mendocina ymp	5109944
YP_001187311.1	CDS	Pmen_1815	NC_009439.1	2003171	2005249	D	PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM	2003171..2005249	Pseudomonas mendocina ymp	5109945
YP_001187312.1	CDS	Pmen_1816	NC_009439.1	2005333	2007519	R	PFAM: surface antigen (D15); Patatin; surface antigen variable number repeat protein; patatin	complement(2005333..2007519)	Pseudomonas mendocina ymp	5109946
YP_001187313.1	CDS	Pmen_1817	NC_009439.1	2007591	2007872	D	TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; putative selenoprotein	2007591..2007872	Pseudomonas mendocina ymp	5109947
YP_001187314.1	CDS	Pmen_1818	NC_009439.1	2007930	2008781	R	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	complement(2007930..2008781)	Pseudomonas mendocina ymp	5109948
YP_001187315.1	CDS	Pmen_1819	NC_009439.1	2008778	2009113	R	TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; export-related chaperone CsaA	complement(2008778..2009113)	Pseudomonas mendocina ymp	5109949
YP_001187316.1	CDS	Pmen_1820	NC_009439.1	2009330	2010076	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	complement(2009330..2010076)	Pseudomonas mendocina ymp	5109950
YP_001187317.1	CDS	Pmen_1821	NC_009439.1	2010212	2011033	D	PFAM: metallophosphoesterase; metallophosphoesterase	2010212..2011033	Pseudomonas mendocina ymp	5109951
YP_001187318.1	CDS	Pmen_1822	NC_009439.1	2011030	2012067	D	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	2011030..2012067	Pseudomonas mendocina ymp	5109952
YP_001187319.1	CDS	Pmen_1823	NC_009439.1	2012122	2013510	R	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; MASE2 domain protein; putative adenylate/guanylate cyclase	complement(2012122..2013510)	Pseudomonas mendocina ymp	5109953
YP_001187320.1	CDS	Pmen_1824	NC_009439.1	2013776	2014093	R	hypothetical protein	complement(2013776..2014093)	Pseudomonas mendocina ymp	5109954
YP_001187321.1	CDS	Pmen_1825	NC_009439.1	2014224	2015237	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	2014224..2015237	Pseudomonas mendocina ymp	5109955
YP_001187322.1	CDS	Pmen_1826	NC_009439.1	2015253	2016704	R	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; TrkH family potassium uptake protein	complement(2015253..2016704)	Pseudomonas mendocina ymp	5109956
YP_001187323.1	CDS	Pmen_1827	NC_009439.1	2017001	2017372	D	PFAM: protein of unknown function UPF0153; hypothetical protein	2017001..2017372	Pseudomonas mendocina ymp	5109957
YP_001187324.1	CDS	Pmen_1828	NC_009439.1	2017430	2017990	D	PFAM: nitroreductase; nitroreductase	2017430..2017990	Pseudomonas mendocina ymp	5109958
YP_001187325.1	CDS	Pmen_1829	NC_009439.1	2018025	2019356	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	complement(2018025..2019356)	Pseudomonas mendocina ymp	5109959
YP_001187326.1	CDS	Pmen_1830	NC_009439.1	2019422	2019835	R	PFAM: protein of unknown function, Spy-related; hypothetical protein	complement(2019422..2019835)	Pseudomonas mendocina ymp	5109960
YP_001187327.1	CDS	Pmen_1831	NC_009439.1	2019976	2020653	R	PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	complement(2019976..2020653)	Pseudomonas mendocina ymp	5109961
YP_001187328.1	CDS	Pmen_1832	NC_009439.1	2020657	2021028	R	hypothetical protein	complement(2020657..2021028)	Pseudomonas mendocina ymp	5109962
YP_001187329.1	CDS	Pmen_1833	NC_009439.1	2021067	2021366	R	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein	complement(2021067..2021366)	Pseudomonas mendocina ymp	5109963
YP_001187330.1	CDS	Pmen_1834	NC_009439.1	2021439	2022350	D	PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein	2021439..2022350	Pseudomonas mendocina ymp	5109964
YP_001187331.1	CDS	Pmen_1835	NC_009439.1	2022322	2022990	D	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; Sua5/YciO/YrdC/YwlC family protein	2022322..2022990	Pseudomonas mendocina ymp	5109965
YP_001187332.1	CDS	Pmen_1836	NC_009439.1	2023038	2023391	R	hypothetical protein	complement(2023038..2023391)	Pseudomonas mendocina ymp	5109966
YP_001187333.1	CDS	Pmen_1837	NC_009439.1	2023561	2024775	D	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase	2023561..2024775	Pseudomonas mendocina ymp	5109967
YP_001187334.1	CDS	Pmen_1838	NC_009439.1	2024789	2025613	D	PFAM: chromosome segregation and condensation protein ScpA; condensin subunit ScpA	2024789..2025613	Pseudomonas mendocina ymp	5109968
YP_001187335.1	CDS	Pmen_1839	NC_009439.1	2025610	2026404	D	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; condensin subunit ScpB	2025610..2026404	Pseudomonas mendocina ymp	5109969
YP_001187336.1	CDS	Pmen_1840	NC_009439.1	2026501	2026683	D	PFAM: protein of unknown function DUF1289; hypothetical protein	2026501..2026683	Pseudomonas mendocina ymp	5109970
YP_001187337.1	CDS	Pmen_1841	NC_009439.1	2026864	2028021	D	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase B	2026864..2028021	Pseudomonas mendocina ymp	5109971
YP_001187338.1	CDS	Pmen_1842	NC_009439.1	2028079	2029005	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	complement(2028079..2029005)	Pseudomonas mendocina ymp	5109972
YP_001187339.1	CDS	Pmen_1843	NC_009439.1	2029245	2030024	R	PFAM: short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase	complement(2029245..2030024)	Pseudomonas mendocina ymp	5109973
YP_001187340.1	CDS	Pmen_1844	NC_009439.1	2030051	2030722	R	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase	complement(2030051..2030722)	Pseudomonas mendocina ymp	5109974
YP_001187341.1	CDS	Pmen_1845	NC_009439.1	2030722	2031426	R	Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase	complement(2030722..2031426)	Pseudomonas mendocina ymp	5109975
YP_001187342.1	CDS	Pmen_1846	NC_009439.1	2031548	2032867	R	Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; N-ethylammeline chlorohydrolase	complement(2031548..2032867)	Pseudomonas mendocina ymp	5109976
YP_001187343.1	CDS	mtnA	NC_009439.1	2033027	2034103	D	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase	2033027..2034103	Pseudomonas mendocina ymp	5109977
YP_001187344.1	CDS	Pmen_1848	NC_009439.1	2034329	2037097	D	negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A	2034329..2037097	Pseudomonas mendocina ymp	5109978
YP_001187345.1	CDS	Pmen_1849	NC_009439.1	2037216	2038301	D	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase	2037216..2038301	Pseudomonas mendocina ymp	5109979
YP_001187346.1	CDS	Pmen_1850	NC_009439.1	2038303	2039397	D	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; prephenate dehydratase	2038303..2039397	Pseudomonas mendocina ymp	5109980
YP_001187347.1	CDS	Pmen_1851	NC_009439.1	2039485	2040594	D	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase	2039485..2040594	Pseudomonas mendocina ymp	5109981
YP_001187348.1	CDS	Pmen_1852	NC_009439.1	2040591	2042831	D	catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate and catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase	2040591..2042831	Pseudomonas mendocina ymp	5109982
YP_001187349.1	CDS	cmk	NC_009439.1	2042828	2043493	D	Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase	2042828..2043493	Pseudomonas mendocina ymp	5109983
YP_001187350.1	CDS	rpsA	NC_009439.1	2043641	2045323	D	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1	2043641..2045323	Pseudomonas mendocina ymp	5109984
YP_001187351.1	CDS	ihfB	NC_009439.1	2045735	2046022	D	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta	2045735..2046022	Pseudomonas mendocina ymp	5109985
YP_001187352.1	CDS	Pmen_1856	NC_009439.1	2046242	2047708	D	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein	2046242..2047708	Pseudomonas mendocina ymp	5109986
YP_001187353.1	CDS	Pmen_1857	NC_009439.1	2047730	2049046	D	PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase	2047730..2049046	Pseudomonas mendocina ymp	5109987
YP_001187354.1	CDS	Pmen_1858	NC_009439.1	2049108	2050064	D	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein	2049108..2050064	Pseudomonas mendocina ymp	5109988
YP_001187355.1	CDS	Pmen_1859	NC_009439.1	2050069	2050653	D	Serine acetyltransferase-like protein	2050069..2050653	Pseudomonas mendocina ymp	5109989
YP_001187356.1	CDS	Pmen_1860	NC_009439.1	2050650	2051738	D	PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; DegT/DnrJ/EryC1/StrS aminotransferase	2050650..2051738	Pseudomonas mendocina ymp	5109990
YP_001187357.1	CDS	Pmen_1861	NC_009439.1	2051770	2053533	D	PFAM: Citrate transporter; TrkA-C domain protein; citrate transporter	2051770..2053533	Pseudomonas mendocina ymp	5109991
YP_001187358.1	CDS	Pmen_1862	NC_009439.1	2053569	2054195	D	PFAM: adenylylsulfate kinase; adenylylsulfate kinase	2053569..2054195	Pseudomonas mendocina ymp	5109992
YP_001187359.1	CDS	Pmen_1863	NC_009439.1	2054197	2055438	D	PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein	2054197..2055438	Pseudomonas mendocina ymp	5109993
YP_001187360.1	CDS	Pmen_1864	NC_009439.1	2055683	2055952	R	hypothetical protein	complement(2055683..2055952)	Pseudomonas mendocina ymp	5109994
YP_001187361.1	CDS	Pmen_1865	NC_009439.1	2056102	2056938	D	hypothetical protein	2056102..2056938	Pseudomonas mendocina ymp	5109995
YP_001187362.1	CDS	Pmen_1867	NC_009439.1	2057754	2059055	R	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	complement(2057754..2059055)	Pseudomonas mendocina ymp	5106571
YP_001187363.1	CDS	Pmen_1868	NC_009439.1	2059770	2060648	D	PFAM: glycosyl transferase, family 2; glycosyl transferase family protein	2059770..2060648	Pseudomonas mendocina ymp	5109997
YP_001187364.1	CDS	Pmen_1869	NC_009439.1	2060651	2061886	D	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	2060651..2061886	Pseudomonas mendocina ymp	5109998
YP_001187365.1	CDS	Pmen_1870	NC_009439.1	2061888	2062745	D	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase	2061888..2062745	Pseudomonas mendocina ymp	5109999
YP_001187366.1	CDS	Pmen_1871	NC_009439.1	2062780	2063547	D	hypothetical protein	2062780..2063547	Pseudomonas mendocina ymp	5110000
YP_001187367.1	CDS	Pmen_1872	NC_009439.1	2063547	2064557	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; Polysaccharide biosynthesis C-terminal domain protein; polysaccharide biosynthesis protein CapD	2063547..2064557	Pseudomonas mendocina ymp	5110001
YP_001187368.1	CDS	Pmen_1873	NC_009439.1	2064550	2065677	D	PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase	2064550..2065677	Pseudomonas mendocina ymp	5110002
YP_001187369.1	CDS	Pmen_1874	NC_009439.1	2065680	2066642	D	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase	2065680..2066642	Pseudomonas mendocina ymp	5110003
YP_001187370.1	CDS	Pmen_1875	NC_009439.1	2066639	2067655	D	PFAM: glycosyl transferase, family 4; glycosyl transferase family protein	2066639..2067655	Pseudomonas mendocina ymp	5110004
YP_001187371.1	CDS	Pmen_1876	NC_009439.1	2067652	2068239	D	hypothetical protein	2067652..2068239	Pseudomonas mendocina ymp	5110005
YP_001187372.1	CDS	Pmen_1877	NC_009439.1	2068397	2069698	D	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	2068397..2069698	Pseudomonas mendocina ymp	5110006
YP_001187373.1	CDS	Pmen_1878	NC_009439.1	2069808	2071676	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; polysaccharide biosynthesis protein CapD	2069808..2071676	Pseudomonas mendocina ymp	5110007
YP_001187374.1	CDS	Pmen_1879	NC_009439.1	2071766	2072089	D	TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; helix-hairpin-helix repeat-containing competence protein ComEA	2071766..2072089	Pseudomonas mendocina ymp	5110008
YP_001187375.1	CDS	Pmen_1880	NC_009439.1	2072456	2073262	R	hypothetical protein	complement(2072456..2073262)	Pseudomonas mendocina ymp	5106572
YP_001187376.1	CDS	Pmen_1881	NC_009439.1	2073299	2074291	R	lysophospholipase-like protein	complement(2073299..2074291)	Pseudomonas mendocina ymp	5110010
YP_001187377.1	CDS	Pmen_1882	NC_009439.1	2074415	2075506	D	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase	2074415..2075506	Pseudomonas mendocina ymp	5110011
YP_001187378.1	CDS	Pmen_1883	NC_009439.1	2075592	2076764	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	2075592..2076764	Pseudomonas mendocina ymp	5110012
YP_001187379.1	CDS	Pmen_1884	NC_009439.1	2076761	2077297	D	hypothetical protein	2076761..2077297	Pseudomonas mendocina ymp	5110013
YP_001187380.1	CDS	Pmen_1885	NC_009439.1	2077365	2077556	D	hypothetical protein	2077365..2077556	Pseudomonas mendocina ymp	5110014
YP_001187381.1	CDS	Pmen_1886	NC_009439.1	2077517	2078110	D	PFAM: Phosphoglycerate mutase; putative phosphohistidine phosphatase SixA	2077517..2078110	Pseudomonas mendocina ymp	5110015
YP_001187382.1	CDS	Pmen_1887	NC_009439.1	2078132	2078629	R	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylguanine DNA methyltransferase, ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase	complement(2078132..2078629)	Pseudomonas mendocina ymp	5110016
YP_001187383.1	CDS	Pmen_1888	NC_009439.1	2078634	2079512	R	PFAM: HhH-GPD family protein; AlkA domain protein; alcohol dehydrogenase	complement(2078634..2079512)	Pseudomonas mendocina ymp	5110017
YP_001187384.1	CDS	Pmen_1889	NC_009439.1	2079755	2080837	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	complement(2079755..2080837)	Pseudomonas mendocina ymp	5110018
YP_001187385.1	CDS	Pmen_1890	NC_009439.1	2080870	2082345	D	flavoprotein involved in K+ transport-like protein	2080870..2082345	Pseudomonas mendocina ymp	5110019
YP_001187386.1	CDS	Pmen_1891	NC_009439.1	2082329	2083258	D	PFAM: Alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein	2082329..2083258	Pseudomonas mendocina ymp	5110020
YP_001187387.1	CDS	Pmen_1892	NC_009439.1	2083258	2084019	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase	2083258..2084019	Pseudomonas mendocina ymp	5110021
YP_001187388.1	CDS	Pmen_1893	NC_009439.1	2084286	2084630	D	PFAM: protein of unknown function DUF1260; hypothetical protein	2084286..2084630	Pseudomonas mendocina ymp	5110022
YP_001187389.1	CDS	Pmen_1895	NC_009439.1	2085481	2086017	R	PFAM: DinB family protein; DinB family protein	complement(2085481..2086017)	Pseudomonas mendocina ymp	5106573
YP_001187390.1	CDS	Pmen_1896	NC_009439.1	2086043	2086603	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(2086043..2086603)	Pseudomonas mendocina ymp	5110024
YP_001187391.1	CDS	Pmen_1897	NC_009439.1	2086629	2087330	R	PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR	complement(2086629..2087330)	Pseudomonas mendocina ymp	5110025
YP_001187392.1	CDS	Pmen_1898	NC_009439.1	2087573	2087935	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	complement(2087573..2087935)	Pseudomonas mendocina ymp	5110026
YP_001187393.1	CDS	Pmen_1899	NC_009439.1	2088029	2088775	R	hypothetical protein	complement(2088029..2088775)	Pseudomonas mendocina ymp	5110027
YP_001187394.1	CDS	Pmen_1900	NC_009439.1	2089212	2089718	R	hypothetical protein	complement(2089212..2089718)	Pseudomonas mendocina ymp	5110028
YP_001187395.1	CDS	Pmen_1901	NC_009439.1	2089804	2090124	R	PFAM: protein of unknown function DUF1330; hypothetical protein	complement(2089804..2090124)	Pseudomonas mendocina ymp	5110029
YP_001187396.1	CDS	Pmen_1902	NC_009439.1	2090316	2091881	R	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; methyl-accepting chemotaxis sensory transducer	complement(2090316..2091881)	Pseudomonas mendocina ymp	5110030
YP_001187397.1	CDS	acnA	NC_009439.1	2092058	2094799	R	catalyzes the conversion of citrate to isocitrate; aconitate hydratase	complement(2092058..2094799)	Pseudomonas mendocina ymp	5110031
YP_001187398.1	CDS	Pmen_1904	NC_009439.1	2095047	2096102	D	putative RNA 2'-O-ribose methyltransferase	2095047..2096102	Pseudomonas mendocina ymp	5110032
YP_001187399.1	CDS	Pmen_1905	NC_009439.1	2096319	2096570	D	TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA	2096319..2096570	Pseudomonas mendocina ymp	5110033
YP_001187400.1	CDS	Pmen_1906	NC_009439.1	2096662	2097735	R	hypothetical protein	complement(2096662..2097735)	Pseudomonas mendocina ymp	5110034
YP_001187401.1	CDS	Pmen_1907	NC_009439.1	2097777	2099150	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein	complement(2097777..2099150)	Pseudomonas mendocina ymp	5110035
YP_001187402.1	CDS	Pmen_1908	NC_009439.1	2099301	2100431	D	Required for the de novo synthesis of pyroxidine via the pdxA branch; catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate; erythronate-4-phosphate dehydrogenase	2099301..2100431	Pseudomonas mendocina ymp	5110036
YP_001187403.1	CDS	Pmen_1909	NC_009439.1	2100597	2101082	D	PFAM: glutathione peroxidase; peroxiredoxin	2100597..2101082	Pseudomonas mendocina ymp	5110037
YP_001187404.1	CDS	Pmen_1910	NC_009439.1	2101079	2101537	D	PFAM: regulatory protein, MarR; MarR family transcriptional regulator	2101079..2101537	Pseudomonas mendocina ymp	5110038
YP_001187405.1	CDS	Pmen_1911	NC_009439.1	2101527	2103890	R	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor hybrid histidine kinase	complement(2101527..2103890)	Pseudomonas mendocina ymp	5110039
YP_001187406.1	CDS	Pmen_1912	NC_009439.1	2103957	2104847	D	PFAM: protein of unknown function DUF815; hypothetical protein	2103957..2104847	Pseudomonas mendocina ymp	5110040
YP_001187407.1	CDS	Pmen_1913	NC_009439.1	2104844	2105326	D	PFAM: GAF domain protein; putative GAF sensor protein	2104844..2105326	Pseudomonas mendocina ymp	5110041
YP_001187408.1	CDS	Pmen_1914	NC_009439.1	2105453	2106115	R	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase domain-containing protein	complement(2105453..2106115)	Pseudomonas mendocina ymp	5110042
YP_001187409.1	CDS	Pmen_1915	NC_009439.1	2106168	2106935	R	hypothetical protein	complement(2106168..2106935)	Pseudomonas mendocina ymp	5110043
YP_001187410.1	CDS	Pmen_1916	NC_009439.1	2107641	2108048	R	hypothetical protein	complement(2107641..2108048)	Pseudomonas mendocina ymp	5106577
YP_001187411.1	CDS	fadE	NC_009439.1	2108149	2110596	R	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase	complement(2108149..2110596)	Pseudomonas mendocina ymp	5110045
YP_001187412.1	CDS	Pmen_1918	NC_009439.1	2110737	2111399	D	cysteine protease-like protein	2110737..2111399	Pseudomonas mendocina ymp	5110046
YP_001187413.1	CDS	Pmen_1919	NC_009439.1	2111554	2112486	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	2111554..2112486	Pseudomonas mendocina ymp	5110047
YP_001187414.1	CDS	Pmen_1920	NC_009439.1	2112483	2113277	D	PFAM: ABC-2 type transporter; ABC transporter	2112483..2113277	Pseudomonas mendocina ymp	5110048
YP_001187415.1	CDS	Pmen_1921	NC_009439.1	2113369	2114391	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	2113369..2114391	Pseudomonas mendocina ymp	5110049
YP_001187416.1	CDS	Pmen_1922	NC_009439.1	2114388	2117456	D	PFAM: acriflavin resistance protein; acriflavin resistance protein	2114388..2117456	Pseudomonas mendocina ymp	5110050
YP_001187417.1	CDS	queF	NC_009439.1	2117629	2118459	D	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase	2117629..2118459	Pseudomonas mendocina ymp	5110051
YP_001187418.1	CDS	Pmen_1924	NC_009439.1	2118515	2118781	R	hypothetical protein	complement(2118515..2118781)	Pseudomonas mendocina ymp	5110052
YP_001187419.1	CDS	Pmen_1925	NC_009439.1	2118900	2119619	R	phosphatase/phosphohexomutase-like protein	complement(2118900..2119619)	Pseudomonas mendocina ymp	5110053
YP_001187420.1	CDS	Pmen_1926	NC_009439.1	2119682	2120092	R	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	complement(2119682..2120092)	Pseudomonas mendocina ymp	5110054
YP_001187421.1	CDS	Pmen_1927	NC_009439.1	2120199	2120903	D	PFAM: VacJ family lipoprotein; VacJ family lipoprotein	2120199..2120903	Pseudomonas mendocina ymp	5110055
YP_001187422.1	CDS	Pmen_1928	NC_009439.1	2120959	2121258	R	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	complement(2120959..2121258)	Pseudomonas mendocina ymp	5110056
YP_001187423.1	CDS	Pmen_1929	NC_009439.1	2121472	2122656	D	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; response regulator receiver protein	2121472..2122656	Pseudomonas mendocina ymp	5110057
YP_001187424.1	CDS	Pmen_1930	NC_009439.1	2122653	2123147	D	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist	2122653..2123147	Pseudomonas mendocina ymp	5110058
YP_001187425.1	CDS	Pmen_1931	NC_009439.1	2123286	2124212	R	TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B	complement(2123286..2124212)	Pseudomonas mendocina ymp	5110059
YP_001187426.1	CDS	Pmen_1932	NC_009439.1	2124409	2124738	D	ferric uptake regulator family protein	2124409..2124738	Pseudomonas mendocina ymp	5110060
YP_001187427.1	CDS	Pmen_1933	NC_009439.1	2124708	2125703	R	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; tRNA-dihydrouridine synthase A	complement(2124708..2125703)	Pseudomonas mendocina ymp	5110061
YP_001187428.1	CDS	dnaE2	NC_009439.1	2125809	2128889	R	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase	complement(2125809..2128889)	Pseudomonas mendocina ymp	5110062
YP_001187429.1	CDS	Pmen_1935	NC_009439.1	2128886	2130307	R	DNA repair nucleotidyltransferase/DNA polymerase-like protein	complement(2128886..2130307)	Pseudomonas mendocina ymp	5110063
YP_001187430.1	CDS	Pmen_1936	NC_009439.1	2130309	2130926	R	hypothetical protein	complement(2130309..2130926)	Pseudomonas mendocina ymp	5110064
YP_001187431.1	CDS	Pmen_1937	NC_009439.1	2131110	2133494	D	TIGRFAM: coenzyme PQQ biosynthesis protein PqqF; PFAM: peptidase M16 domain protein; coenzyme PQQ biosynthesis protein PqqF	2131110..2133494	Pseudomonas mendocina ymp	5110065
YP_001187432.1	CDS	Pmen_1938	NC_009439.1	2133783	2134967	D	hypothetical protein	2133783..2134967	Pseudomonas mendocina ymp	5110066
YP_001187433.1	CDS	Pmen_1939	NC_009439.1	2135309	2136463	D	PFAM: domain of unknown function DUF1745; hypothetical protein	2135309..2136463	Pseudomonas mendocina ymp	5110067
YP_001187434.1	CDS	Pmen_1941	NC_009439.1	2138569	2139870	D	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	2138569..2139870	Pseudomonas mendocina ymp	5106578
YP_001187435.1	CDS	Pmen_1942	NC_009439.1	2140639	2141058	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(2140639..2141058)	Pseudomonas mendocina ymp	5110069
YP_001187436.1	CDS	Pmen_1943	NC_009439.1	2141102	2141767	R	PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator	complement(2141102..2141767)	Pseudomonas mendocina ymp	5110070
YP_001187437.1	CDS	Pmen_1944	NC_009439.1	2141791	2142366	R	hypothetical protein	complement(2141791..2142366)	Pseudomonas mendocina ymp	5110071
YP_001187438.1	CDS	Pmen_1945	NC_009439.1	2142495	2143286	R	PFAM: ABC-2 type transporter; ABC transporter	complement(2142495..2143286)	Pseudomonas mendocina ymp	5110072
YP_001187439.1	CDS	Pmen_1946	NC_009439.1	2143283	2144101	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(2143283..2144101)	Pseudomonas mendocina ymp	5110073
YP_001187440.1	CDS	Pmen_1947	NC_009439.1	2144098	2145063	R	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; hypothetical protein	complement(2144098..2145063)	Pseudomonas mendocina ymp	5110074
YP_001187441.1	CDS	Pmen_1948	NC_009439.1	2145145	2146320	R	branched chain amino acid ABC transporter substrate-binding protein	complement(2145145..2146320)	Pseudomonas mendocina ymp	5110075
YP_001187442.1	CDS	Pmen_1949	NC_009439.1	2146479	2146916	D	hypothetical protein	2146479..2146916	Pseudomonas mendocina ymp	5110076
YP_001187443.1	CDS	Pmen_1950	NC_009439.1	2146917	2148182	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase	2146917..2148182	Pseudomonas mendocina ymp	5110077
YP_001187444.1	CDS	Pmen_1951	NC_009439.1	2148179	2148829	D	PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator	2148179..2148829	Pseudomonas mendocina ymp	5110078
YP_001187445.1	CDS	Pmen_1952	NC_009439.1	2149004	2149543	D	PFAM: PEBP family protein; PBP family phospholipid-binding protein	2149004..2149543	Pseudomonas mendocina ymp	5110079
YP_001187446.1	CDS	Pmen_1953	NC_009439.1	2149686	2150492	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	2149686..2150492	Pseudomonas mendocina ymp	5110080
YP_001187447.1	CDS	Pmen_1954	NC_009439.1	2150613	2151914	R	glucose/sorbosone dehydrogenase-like protein	complement(2150613..2151914)	Pseudomonas mendocina ymp	5110081
YP_001187448.1	CDS	Pmen_1955	NC_009439.1	2151911	2152339	R	hypothetical protein	complement(2151911..2152339)	Pseudomonas mendocina ymp	5109846
YP_001187449.1	CDS	Pmen_1956	NC_009439.1	2152583	2153242	R	PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein	complement(2152583..2153242)	Pseudomonas mendocina ymp	5109847
YP_001187450.1	CDS	Pmen_1957	NC_009439.1	2153344	2155206	R	PFAM: Pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone	complement(2153344..2155206)	Pseudomonas mendocina ymp	5109848
YP_001187451.1	CDS	Pmen_1958	NC_009439.1	2155497	2155916	D	hypothetical protein	2155497..2155916	Pseudomonas mendocina ymp	5109849
YP_001187452.1	CDS	Pmen_1959	NC_009439.1	2156065	2156937	D	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	2156065..2156937	Pseudomonas mendocina ymp	5109850
YP_001187453.1	CDS	Pmen_1960	NC_009439.1	2156959	2157708	D	hypothetical protein	2156959..2157708	Pseudomonas mendocina ymp	5109851
YP_001187454.1	CDS	Pmen_1961	NC_009439.1	2157765	2158694	D	PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein	2157765..2158694	Pseudomonas mendocina ymp	5109852
YP_001187455.1	CDS	Pmen_1962	NC_009439.1	2159269	2159655	R	hypothetical protein	complement(2159269..2159655)	Pseudomonas mendocina ymp	5109853
YP_001187456.1	CDS	Pmen_1963	NC_009439.1	2159874	2161649	D	PFAM: Pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone	2159874..2161649	Pseudomonas mendocina ymp	5109854
YP_001187457.1	CDS	Pmen_1964	NC_009439.1	2161982	2163502	D	PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase	2161982..2163502	Pseudomonas mendocina ymp	5109855
YP_001187458.1	CDS	pqqA	NC_009439.1	2163985	2164056	D	Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme; coenzyme PQQ synthesis protein PqqA	2163985..2164056	Pseudomonas mendocina ymp	5109856
YP_001187459.1	CDS	Pmen_1966	NC_009439.1	2164104	2165018	D	possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB	2164104..2165018	Pseudomonas mendocina ymp	5109857
YP_001187460.1	CDS	Pmen_1967	NC_009439.1	2165042	2165794	D	Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC	2165042..2165794	Pseudomonas mendocina ymp	5109858
YP_001187461.1	CDS	Pmen_1968	NC_009439.1	2165791	2166096	D	with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone; pyrroloquinoline quinone biosynthesis protein PqqD	2165791..2166096	Pseudomonas mendocina ymp	5109859
YP_001187462.1	CDS	Pmen_1969	NC_009439.1	2166068	2167222	D	TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; pyrroloquinoline quinone biosynthesis protein PqqE	2166068..2167222	Pseudomonas mendocina ymp	5109860
YP_001187463.1	CDS	Pmen_1970	NC_009439.1	2167210	2169168	D	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase	2167210..2169168	Pseudomonas mendocina ymp	5109861
YP_001187464.1	CDS	Pmen_1971	NC_009439.1	2169246	2170409	D	PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase	2169246..2170409	Pseudomonas mendocina ymp	5109862
YP_001187465.1	CDS	Pmen_1972	NC_009439.1	2170393	2172117	D	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; PAS/PAC sensor hybrid histidine kinase	2170393..2172117	Pseudomonas mendocina ymp	5109863
YP_001187466.1	CDS	Pmen_1973	NC_009439.1	2172198	2172605	D	hypothetical protein	2172198..2172605	Pseudomonas mendocina ymp	5109864
YP_001187467.1	CDS	Pmen_1974	NC_009439.1	2172590	2173543	D	hypothetical protein	2172590..2173543	Pseudomonas mendocina ymp	5109865
YP_001187468.1	CDS	Pmen_1975	NC_009439.1	2173597	2174880	R	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	complement(2173597..2174880)	Pseudomonas mendocina ymp	5109866
YP_001187469.1	CDS	thrS	NC_009439.1	2175406	2177328	D	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase	2175406..2177328	Pseudomonas mendocina ymp	5106579
YP_001187470.1	CDS	infC	NC_009439.1	2177346	2177879	D	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3	2177346..2177879	Pseudomonas mendocina ymp	5109868
YP_001187471.1	CDS	rpmI	NC_009439.1	2177940	2178134	D	PFAM: ribosomal protein L35; 50S ribosomal protein L35	2177940..2178134	Pseudomonas mendocina ymp	5109869
YP_001187472.1	CDS	rplT	NC_009439.1	2178164	2178520	D	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20	2178164..2178520	Pseudomonas mendocina ymp	5109870
YP_001187473.1	CDS	pheS	NC_009439.1	2178617	2179633	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha	2178617..2179633	Pseudomonas mendocina ymp	5109871
YP_001187474.1	CDS	pheT	NC_009439.1	2179678	2182056	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta	2179678..2182056	Pseudomonas mendocina ymp	5109872
YP_001187475.1	CDS	ihfA	NC_009439.1	2182060	2182362	D	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha	2182060..2182362	Pseudomonas mendocina ymp	5109873
YP_001187476.1	CDS	Pmen_1983	NC_009439.1	2182343	2182699	D	PFAM: regulatory protein, MerR; MerR family transcriptional regulator	2182343..2182699	Pseudomonas mendocina ymp	5109874
YP_001187477.1	CDS	Pmen_1984	NC_009439.1	2183139	2183462	D	TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; helix-hairpin-helix repeat-containing competence protein ComEA	2183139..2183462	Pseudomonas mendocina ymp	5106580
YP_001187478.1	CDS	Pmen_1985	NC_009439.1	2183561	2187037	D	TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; DNA helicase/exodeoxyribonuclease V subunit gamma	2183561..2187037	Pseudomonas mendocina ymp	5109876
YP_001187479.1	CDS	Pmen_1986	NC_009439.1	2187034	2190663	D	TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; DNA helicase/exodeoxyribonuclease V subunit beta	2187034..2190663	Pseudomonas mendocina ymp	5109877
YP_001187480.1	CDS	Pmen_1987	NC_009439.1	2190660	2192690	D	TIGRFAM: exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase; DNA helicase/exodeoxyribonuclease V subunit alpha	2190660..2192690	Pseudomonas mendocina ymp	5109878
YP_001187481.1	CDS	Pmen_1988	NC_009439.1	2198715	2200277	R	PFAM: transposase IS66; transposase IS66	complement(2198715..2200277)	Pseudomonas mendocina ymp	5106585
YP_001187482.1	CDS	Pmen_1989	NC_009439.1	2200297	2200656	R	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	complement(2200297..2200656)	Pseudomonas mendocina ymp	5109880
YP_001187483.1	CDS	Pmen_1990	NC_009439.1	2200753	2201109	R	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; putative 6-pyruvoyl tetrahydropterin synthase	complement(2200753..2201109)	Pseudomonas mendocina ymp	5109881
YP_001187484.1	CDS	Pmen_1991	NC_009439.1	2201164	2202000	R	hypothetical protein	complement(2201164..2202000)	Pseudomonas mendocina ymp	5109882
YP_001187485.1	CDS	Pmen_1992	NC_009439.1	2202051	2203130	R	hypothetical protein	complement(2202051..2203130)	Pseudomonas mendocina ymp	5109883
YP_001187486.1	CDS	Pmen_1993	NC_009439.1	2203279	2203587	D	PFAM: Propeptide, PepSY amd peptidase M4; peptidase	2203279..2203587	Pseudomonas mendocina ymp	5109884
YP_001187487.1	CDS	Pmen_1994	NC_009439.1	2203587	2203901	D	PFAM: Propeptide, PepSY amd peptidase M4; peptidase	2203587..2203901	Pseudomonas mendocina ymp	5109885
YP_001187488.1	CDS	Pmen_1995	NC_009439.1	2203901	2204569	D	PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	2203901..2204569	Pseudomonas mendocina ymp	5109886
YP_001187489.1	CDS	Pmen_1996	NC_009439.1	2204566	2205879	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; integral membrane sensor signal transduction histidine kinase	2204566..2205879	Pseudomonas mendocina ymp	5109887
YP_001187490.1	CDS	Pmen_1997	NC_009439.1	2205959	2206555	R	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NADPH-dependent FMN reductase	complement(2205959..2206555)	Pseudomonas mendocina ymp	5109888
YP_001187491.1	CDS	Pmen_1998	NC_009439.1	2206701	2208845	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(2206701..2208845)	Pseudomonas mendocina ymp	5109889
YP_001187492.1	CDS	Pmen_1999	NC_009439.1	2209048	2210367	D	PFAM: Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; Na+/H+ antiporter NhaC	2209048..2210367	Pseudomonas mendocina ymp	5109890
YP_001187493.1	CDS	Pmen_2000	NC_009439.1	2210486	2212168	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer	2210486..2212168	Pseudomonas mendocina ymp	5109891
YP_001187494.1	CDS	Pmen_2001	NC_009439.1	2212170	2213072	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(2212170..2213072)	Pseudomonas mendocina ymp	5109892
YP_001187495.1	CDS	Pmen_2002	NC_009439.1	2213191	2213799	D	FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase	2213191..2213799	Pseudomonas mendocina ymp	5109893
YP_001187496.1	CDS	Pmen_2003	NC_009439.1	2213859	2215445	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(2213859..2215445)	Pseudomonas mendocina ymp	5109894
YP_001187497.1	CDS	Pmen_2004	NC_009439.1	2215954	2216355	R	hypothetical protein	complement(2215954..2216355)	Pseudomonas mendocina ymp	5109895
YP_001187498.1	CDS	Pmen_2005	NC_009439.1	2216367	2217446	R	PFAM: NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase	complement(2216367..2217446)	Pseudomonas mendocina ymp	5109896
YP_001187499.1	CDS	Pmen_2006	NC_009439.1	2217571	2218443	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	2217571..2218443	Pseudomonas mendocina ymp	5109897
YP_001187500.1	CDS	Pmen_2007	NC_009439.1	2218501	2219256	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(2218501..2219256)	Pseudomonas mendocina ymp	5109898
YP_001187501.1	CDS	Pmen_2008	NC_009439.1	2219256	2219924	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	complement(2219256..2219924)	Pseudomonas mendocina ymp	5109899
YP_001187502.1	CDS	Pmen_2009	NC_009439.1	2219921	2220718	R	PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; cystine transporter subunit	complement(2219921..2220718)	Pseudomonas mendocina ymp	5109900
YP_001187503.1	CDS	Pmen_2010	NC_009439.1	2220790	2221794	R	catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase	complement(2220790..2221794)	Pseudomonas mendocina ymp	5109901
YP_001187504.1	CDS	Pmen_2011	NC_009439.1	2221916	2222620	R	Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase	complement(2221916..2222620)	Pseudomonas mendocina ymp	5109902
YP_001187505.1	CDS	Pmen_2012	NC_009439.1	2222617	2223645	R	PFAM: homoserine dehydrogenase; homoserine dehydrogenase, NAD-binding; homoserine dehydrogenase	complement(2222617..2223645)	Pseudomonas mendocina ymp	5109903
YP_001187506.1	CDS	Pmen_2013	NC_009439.1	2223665	2224087	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	complement(2223665..2224087)	Pseudomonas mendocina ymp	5109904
YP_001187507.1	CDS	Pmen_2014	NC_009439.1	2224193	2225062	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	2224193..2225062	Pseudomonas mendocina ymp	5109905
YP_001187508.1	CDS	Pmen_2015	NC_009439.1	2225193	2225843	D	catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; dihydropteridine reductase	2225193..2225843	Pseudomonas mendocina ymp	5109906
YP_001187509.1	CDS	Pmen_2016	NC_009439.1	2225897	2226292	R	PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP	complement(2225897..2226292)	Pseudomonas mendocina ymp	5109907
YP_001187510.1	CDS	Pmen_2017	NC_009439.1	2226433	2227359	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	2226433..2227359	Pseudomonas mendocina ymp	5109908
YP_001187511.1	CDS	Pmen_2018	NC_009439.1	2227372	2228250	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(2227372..2228250)	Pseudomonas mendocina ymp	5109909
YP_001187512.1	CDS	Pmen_2019	NC_009439.1	2228352	2229884	D	Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L	2228352..2229884	Pseudomonas mendocina ymp	5109910
YP_001187513.1	CDS	Pmen_2020	NC_009439.1	2229881	2232328	D	hypothetical protein	2229881..2232328	Pseudomonas mendocina ymp	5109911
YP_001187514.1	CDS	Pmen_2021	NC_009439.1	2232375	2233226	R	hypothetical protein	complement(2232375..2233226)	Pseudomonas mendocina ymp	5109912
YP_001187515.1	CDS	Pmen_2022	NC_009439.1	2233323	2234252	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	2233323..2234252	Pseudomonas mendocina ymp	5109913
YP_001187516.1	CDS	Pmen_2023	NC_009439.1	2234246	2235265	R	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; translation factor SUA5	complement(2234246..2235265)	Pseudomonas mendocina ymp	5109914
YP_001187517.1	CDS	Pmen_2024	NC_009439.1	2235287	2237182	R	PFAM: Patatin; patatin	complement(2235287..2237182)	Pseudomonas mendocina ymp	5109915
YP_001187518.1	CDS	Pmen_2025	NC_009439.1	2237262	2237540	R	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase	complement(2237262..2237540)	Pseudomonas mendocina ymp	5109916
YP_001187519.1	CDS	Pmen_2026	NC_009439.1	2237688	2238917	D	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein	2237688..2238917	Pseudomonas mendocina ymp	5109917
YP_001187520.1	CDS	Pmen_2027	NC_009439.1	2238929	2239756	R	amino acid ABC transporter periplasmic protein	complement(2238929..2239756)	Pseudomonas mendocina ymp	5109918
YP_001187521.1	CDS	Pmen_2028	NC_009439.1	2239749	2241704	R	AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase	complement(2239749..2241704)	Pseudomonas mendocina ymp	5109919
YP_001187522.1	CDS	Pmen_2029	NC_009439.1	2241842	2242741	R	catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase	complement(2241842..2242741)	Pseudomonas mendocina ymp	5109920
YP_001187523.1	CDS	Pmen_2030	NC_009439.1	2242923	2244857	R	PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; 3-methylcrotonoyl-CoA carboxylase subunit alpha	complement(2242923..2244857)	Pseudomonas mendocina ymp	5109921
YP_001187524.1	CDS	Pmen_2031	NC_009439.1	2244854	2245654	R	catalyzes the hydration of gamma-carboxygeranoyl-CoA to 3-hydroxy-gamma-carboxygeranoyl-CoA; gamma-carboxygeranoyl-CoA hydratase	complement(2244854..2245654)	Pseudomonas mendocina ymp	5109922
YP_001187525.1	CDS	Pmen_2032	NC_009439.1	2245730	2247337	R	PFAM: carboxyl transferase; propionyl-CoA carboxylase	complement(2245730..2247337)	Pseudomonas mendocina ymp	5109923
YP_001187526.1	CDS	Pmen_2033	NC_009439.1	2247438	2248601	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; isovaleryl-CoA dehydrogenase	complement(2247438..2248601)	Pseudomonas mendocina ymp	5109767
YP_001187527.1	CDS	Pmen_2034	NC_009439.1	2248666	2249052	R	PFAM: regulatory protein, MerR; MerR family transcriptional regulator	complement(2248666..2249052)	Pseudomonas mendocina ymp	5109768
YP_001187528.1	CDS	Pmen_2035	NC_009439.1	2249134	2249901	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	2249134..2249901	Pseudomonas mendocina ymp	5109769
YP_001187529.1	CDS	Pmen_2036	NC_009439.1	2249992	2251179	D	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase	2249992..2251179	Pseudomonas mendocina ymp	5109770
YP_001187530.1	CDS	Pmen_2037	NC_009439.1	2251264	2252391	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	2251264..2252391	Pseudomonas mendocina ymp	5109771
YP_001187531.1	CDS	ampC	NC_009439.1	2252509	2253645	R	PFAM: beta-lactamase; beta-lactamase	complement(2252509..2253645)	Pseudomonas mendocina ymp	5109772
YP_001187532.1	CDS	Pmen_2039	NC_009439.1	2253658	2254095	R	PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator	complement(2253658..2254095)	Pseudomonas mendocina ymp	5109773
YP_001187533.1	CDS	Pmen_2040	NC_009439.1	2254199	2255125	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	2254199..2255125	Pseudomonas mendocina ymp	5109774
YP_001187534.1	CDS	Pmen_2041	NC_009439.1	2255115	2256950	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; Fis family GAF modulated sigma54 specific transcriptional regulator	complement(2255115..2256950)	Pseudomonas mendocina ymp	5109775
YP_001187535.1	CDS	Pmen_2042	NC_009439.1	2257184	2258305	D	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein	2257184..2258305	Pseudomonas mendocina ymp	5109776
YP_001187536.1	CDS	Pmen_2043	NC_009439.1	2258305	2259402	D	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein	2258305..2259402	Pseudomonas mendocina ymp	5109777
YP_001187537.1	CDS	Pmen_2044	NC_009439.1	2259399	2260262	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	2259399..2260262	Pseudomonas mendocina ymp	5109778
YP_001187538.1	CDS	Pmen_2045	NC_009439.1	2260271	2261071	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	2260271..2261071	Pseudomonas mendocina ymp	5109779
YP_001187539.1	CDS	Pmen_2046	NC_009439.1	2261084	2261356	D	hypothetical protein	2261084..2261356	Pseudomonas mendocina ymp	5109780
YP_001187540.1	CDS	Pmen_2047	NC_009439.1	2261408	2263150	D	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	2261408..2263150	Pseudomonas mendocina ymp	5109781
YP_001187541.1	CDS	Pmen_2048	NC_009439.1	2263211	2264065	R	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	complement(2263211..2264065)	Pseudomonas mendocina ymp	5109782
YP_001187542.1	CDS	tig	NC_009439.1	2264792	2266102	D	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor	2264792..2266102	Pseudomonas mendocina ymp	5106588
YP_001187543.1	CDS	clpP	NC_009439.1	2266197	2266838	D	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit	2266197..2266838	Pseudomonas mendocina ymp	5109784
YP_001187544.1	CDS	clpX	NC_009439.1	2266946	2268226	D	binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX	2266946..2268226	Pseudomonas mendocina ymp	5109785
YP_001187545.1	CDS	Pmen_2052	NC_009439.1	2268376	2270772	D	TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La	2268376..2270772	Pseudomonas mendocina ymp	5109786
YP_001187546.1	CDS	Pmen_2053	NC_009439.1	2270908	2271180	D	PFAM: histone family protein DNA-binding protein; nucleoid protein HU subunit beta	2270908..2271180	Pseudomonas mendocina ymp	5109787
YP_001187547.1	CDS	Pmen_2054	NC_009439.1	2271376	2273223	D	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase	2271376..2273223	Pseudomonas mendocina ymp	5109788
YP_001187548.1	CDS	Pmen_2055	NC_009439.1	2273278	2274825	R	PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase	complement(2273278..2274825)	Pseudomonas mendocina ymp	5109789
YP_001187549.1	CDS	Pmen_2056	NC_009439.1	2275044	2275838	R	PFAM: short-chain dehydrogenase/reductase SDR; enoyl-(acyl carrier protein) reductase	complement(2275044..2275838)	Pseudomonas mendocina ymp	5109790
YP_001187550.1	CDS	Pmen_2057	NC_009439.1	2275867	2277480	R	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; ABC transporter-like protein	complement(2275867..2277480)	Pseudomonas mendocina ymp	5109791
YP_001187551.1	CDS	Pmen_2058	NC_009439.1	2277482	2278501	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(2277482..2278501)	Pseudomonas mendocina ymp	5109792
YP_001187552.1	CDS	Pmen_2059	NC_009439.1	2278504	2279577	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(2278504..2279577)	Pseudomonas mendocina ymp	5109793
YP_001187553.1	CDS	Pmen_2060	NC_009439.1	2279579	2281426	R	PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein	complement(2279579..2281426)	Pseudomonas mendocina ymp	5109794
YP_001187554.1	CDS	Pmen_2061	NC_009439.1	2281423	2283273	R	PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein	complement(2281423..2283273)	Pseudomonas mendocina ymp	5109795
YP_001187555.1	CDS	Pmen_2062	NC_009439.1	2283400	2284842	D	PFAM: GAF domain protein; HDOD; putative signal transduction protein	2283400..2284842	Pseudomonas mendocina ymp	5109796
YP_001187556.1	CDS	Pmen_2063	NC_009439.1	2284843	2286339	R	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; lytic transglycosylase	complement(2284843..2286339)	Pseudomonas mendocina ymp	5109797
YP_001187557.1	CDS	Pmen_2064	NC_009439.1	2286590	2287363	R	PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase	complement(2286590..2287363)	Pseudomonas mendocina ymp	5109798
YP_001187558.1	CDS	Pmen_2065	NC_009439.1	2287436	2288194	D	hypothetical protein	2287436..2288194	Pseudomonas mendocina ymp	5109799
YP_001187559.1	CDS	rnhA	NC_009439.1	2288235	2288687	D	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H	2288235..2288687	Pseudomonas mendocina ymp	5109800
YP_001187560.1	CDS	Pmen_2067	NC_009439.1	2288761	2289519	D	3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon	2288761..2289519	Pseudomonas mendocina ymp	5109801
YP_001187561.1	CDS	Pmen_2068	NC_009439.1	2289642	2291885	D	PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; lysine decarboxylase	2289642..2291885	Pseudomonas mendocina ymp	5109802
YP_001187562.1	CDS	Pmen_2069	NC_009439.1	2292088	2292900	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	2292088..2292900	Pseudomonas mendocina ymp	5109803
YP_001187563.1	CDS	Pmen_2070	NC_009439.1	2292947	2294626	D	hypothetical protein	2292947..2294626	Pseudomonas mendocina ymp	5109804
YP_001187564.1	CDS	nudC	NC_009439.1	2294626	2295447	D	can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase	2294626..2295447	Pseudomonas mendocina ymp	5109805
YP_001187565.1	CDS	Pmen_2072	NC_009439.1	2295495	2296340	R	PFAM: protein of unknown function DUF81; hypothetical protein	complement(2295495..2296340)	Pseudomonas mendocina ymp	5109806
YP_001187566.1	CDS	Pmen_2073	NC_009439.1	2296376	2297023	D	hypothetical protein	2296376..2297023	Pseudomonas mendocina ymp	5109807
YP_001187567.1	CDS	Pmen_2074	NC_009439.1	2297259	2298026	R	PFAM: short-chain dehydrogenase/reductase SDR; short chain dehydrogenase	complement(2297259..2298026)	Pseudomonas mendocina ymp	5109808
YP_001187568.1	CDS	Pmen_2075	NC_009439.1	2298043	2299110	R	PFAM: aminoglycoside phosphotransferase; aminoglycoside phosphotransferase	complement(2298043..2299110)	Pseudomonas mendocina ymp	5109809
YP_001187569.1	CDS	Pmen_2076	NC_009439.1	2299378	2300367	R	TIGRFAM: alpha-L-glutamate ligase-like protein; PFAM: RimK domain protein ATP-grasp; alpha-L-glutamate ligase-like protein	complement(2299378..2300367)	Pseudomonas mendocina ymp	5109810
YP_001187570.1	CDS	Pmen_2077	NC_009439.1	2300372	2301898	R	hypothetical protein	complement(2300372..2301898)	Pseudomonas mendocina ymp	5109811
YP_001187571.1	CDS	Pmen_2078	NC_009439.1	2301904	2302440	R	PFAM: protein of unknown function DUF785; hypothetical protein	complement(2301904..2302440)	Pseudomonas mendocina ymp	5109812
YP_001187572.1	CDS	Pmen_2079	NC_009439.1	2302744	2303466	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator	2302744..2303466	Pseudomonas mendocina ymp	5109813
YP_001187573.1	CDS	prpB	NC_009439.1	2303463	2304350	D	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase	2303463..2304350	Pseudomonas mendocina ymp	5109814
YP_001187574.1	CDS	Pmen_2081	NC_009439.1	2304387	2305601	D	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase	2304387..2305601	Pseudomonas mendocina ymp	5109815
YP_001187575.1	CDS	Pmen_2082	NC_009439.1	2305603	2308224	D	Catalyzes the conversion of citrate to isocitrate; aconitate hydratase	2305603..2308224	Pseudomonas mendocina ymp	5109816
YP_001187576.1	CDS	Pmen_2083	NC_009439.1	2308401	2309633	D	TIGRFAM: putative AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; methylitaconate delta2-delta3-isomerase	2308401..2309633	Pseudomonas mendocina ymp	5109817
YP_001187577.1	CDS	Pmen_2084	NC_009439.1	2309699	2310517	R	PFAM: protein of unknown function DUF299; hypothetical protein	complement(2309699..2310517)	Pseudomonas mendocina ymp	5109818
YP_001187578.1	CDS	Pmen_2085	NC_009439.1	2310698	2313070	D	catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase	2310698..2313070	Pseudomonas mendocina ymp	5109819
YP_001187579.1	CDS	Pmen_2086	NC_009439.1	2313258	2314247	D	hypothetical protein	2313258..2314247	Pseudomonas mendocina ymp	5109820
YP_001187580.1	CDS	Pmen_2087	NC_009439.1	2314499	2314987	D	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA	2314499..2314987	Pseudomonas mendocina ymp	5109821
YP_001187581.1	CDS	Pmen_2088	NC_009439.1	2314993	2315979	D	PFAM: Mg2+ transporter protein, CorA family protein; Mg2+ transporter protein, CorA family protein	2314993..2315979	Pseudomonas mendocina ymp	5109822
YP_001187582.1	CDS	Pmen_2089	NC_009439.1	2316035	2316280	D	hypothetical protein	2316035..2316280	Pseudomonas mendocina ymp	5109823
YP_001187583.1	CDS	Pmen_2090	NC_009439.1	2316282	2317106	D	PFAM: Conserved TM helix repeat-containing protein; TM helix repeat-containing protein	2316282..2317106	Pseudomonas mendocina ymp	5109824
YP_001187584.1	CDS	Pmen_2091	NC_009439.1	2317189	2317779	D	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas fluorescens and P. aeruginosa regulates outer membrane protein OprF expression; RNA polymerase sigma factor SigX	2317189..2317779	Pseudomonas mendocina ymp	5109825
YP_001187585.1	CDS	Pmen_2092	NC_009439.1	2317888	2318871	D	PFAM: OmpA/MotB domain protein; OmpF family protein; OmpF family protein	2317888..2318871	Pseudomonas mendocina ymp	5109826
YP_001187586.1	CDS	Pmen_2093	NC_009439.1	2318986	2319729	R	catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase	complement(2318986..2319729)	Pseudomonas mendocina ymp	5109827
YP_001187587.1	CDS	Pmen_2094	NC_009439.1	2319795	2322512	R	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; assimilatory nitrate reductase (NADH) subunit alpha	complement(2319795..2322512)	Pseudomonas mendocina ymp	5109828
YP_001187588.1	CDS	Pmen_2095	NC_009439.1	2322622	2322948	R	TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; assimilatory nitrite reductase (NAD(P)H) small subunit	complement(2322622..2322948)	Pseudomonas mendocina ymp	5109829
YP_001187589.1	CDS	Pmen_2096	NC_009439.1	2322945	2325401	R	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; assimilatory nitrite reductase (NAD(P)H) large subunit	complement(2322945..2325401)	Pseudomonas mendocina ymp	5109830
YP_001187590.1	CDS	Pmen_2097	NC_009439.1	2325681	2327345	R	PFAM: protein kinase; protein phosphatase 2C domain protein; SMART: serine/threonine protein kinase; protein kinase	complement(2325681..2327345)	Pseudomonas mendocina ymp	5109831
YP_001187591.1	CDS	Pmen_2098	NC_009439.1	2327456	2328667	R	TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; nitrite transporter	complement(2327456..2328667)	Pseudomonas mendocina ymp	5109832
YP_001187592.1	CDS	Pmen_2099	NC_009439.1	2329090	2329245	R	hypothetical protein	complement(2329090..2329245)	Pseudomonas mendocina ymp	5109833
YP_001187593.1	CDS	Pmen_2100	NC_009439.1	2329386	2329829	R	thioesterase-like protein	complement(2329386..2329829)	Pseudomonas mendocina ymp	5109834
YP_001187594.1	CDS	Pmen_2101	NC_009439.1	2329908	2331752	R	PFAM: sulfatase; sulfatase	complement(2329908..2331752)	Pseudomonas mendocina ymp	5109835
YP_001187595.1	CDS	Pmen_2102	NC_009439.1	2331826	2332515	R	hypothetical protein	complement(2331826..2332515)	Pseudomonas mendocina ymp	5109836
YP_001187596.1	CDS	Pmen_2103	NC_009439.1	2332626	2333417	R	TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D	complement(2332626..2333417)	Pseudomonas mendocina ymp	5109837
YP_001187597.1	CDS	Pmen_2104	NC_009439.1	2333535	2334386	R	TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; nitrate ABC transporter inner membrane subunit	complement(2333535..2334386)	Pseudomonas mendocina ymp	5109838
YP_001187598.1	CDS	Pmen_2105	NC_009439.1	2334399	2335682	R	nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein	complement(2334399..2335682)	Pseudomonas mendocina ymp	5109839
YP_001187599.1	CDS	Pmen_2106	NC_009439.1	2336070	2336384	R	hypothetical protein	complement(2336070..2336384)	Pseudomonas mendocina ymp	5109840
YP_001187600.1	CDS	Pmen_2107	NC_009439.1	2336532	2336924	D	hypothetical protein	2336532..2336924	Pseudomonas mendocina ymp	5109841
YP_001187601.1	CDS	Pmen_2108	NC_009439.1	2337024	2337713	R	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(2337024..2337713)	Pseudomonas mendocina ymp	5109842
YP_001187602.1	CDS	Pmen_2109	NC_009439.1	2337900	2338118	D	hypothetical protein	2337900..2338118	Pseudomonas mendocina ymp	5109843
YP_001187603.1	CDS	Pmen_2110	NC_009439.1	2338357	2339364	R	PFAM: phage integrase family protein; phage integrase family protein	complement(2338357..2339364)	Pseudomonas mendocina ymp	5106589
YP_001187604.1	CDS	Pmen_2111	NC_009439.1	2339364	2340641	R	hypothetical protein	complement(2339364..2340641)	Pseudomonas mendocina ymp	5109845
YP_001187605.1	CDS	Pmen_2112	NC_009439.1	2340795	2341985	R	PFAM: Zonular occludens toxin; zonular occludens toxin	complement(2340795..2341985)	Pseudomonas mendocina ymp	5109453
YP_001187606.1	CDS	Pmen_2113	NC_009439.1	2341985	2342302	R	hypothetical protein	complement(2341985..2342302)	Pseudomonas mendocina ymp	5109454
YP_001187607.1	CDS	Pmen_2114	NC_009439.1	2342304	2343620	R	hypothetical protein	complement(2342304..2343620)	Pseudomonas mendocina ymp	5109455
YP_001187608.1	CDS	Pmen_2115	NC_009439.1	2343974	2344177	R	hypothetical protein	complement(2343974..2344177)	Pseudomonas mendocina ymp	5109456
YP_001187609.1	CDS	Pmen_2116	NC_009439.1	2344187	2344366	R	hypothetical protein	complement(2344187..2344366)	Pseudomonas mendocina ymp	5109457
YP_001187610.1	CDS	Pmen_2117	NC_009439.1	2344382	2344750	R	hypothetical protein	complement(2344382..2344750)	Pseudomonas mendocina ymp	5109458
YP_001187611.1	CDS	Pmen_2119	NC_009439.1	2344999	2345286	R	hypothetical protein	complement(2344999..2345286)	Pseudomonas mendocina ymp	5106590
YP_001187612.1	CDS	Pmen_2120	NC_009439.1	2345291	2345581	R	hypothetical protein	complement(2345291..2345581)	Pseudomonas mendocina ymp	5109460
YP_001187613.1	CDS	Pmen_2121	NC_009439.1	2345621	2345836	R	hypothetical protein	complement(2345621..2345836)	Pseudomonas mendocina ymp	5109461
YP_001187614.1	CDS	Pmen_2122	NC_009439.1	2345967	2346236	D	hypothetical protein	2345967..2346236	Pseudomonas mendocina ymp	5109462
YP_001187615.1	CDS	Pmen_2123	NC_009439.1	2346304	2347131	D	hypothetical protein	2346304..2347131	Pseudomonas mendocina ymp	5109463
YP_001187616.1	CDS	Pmen_2124	NC_009439.1	2347179	2347838	D	hypothetical protein	2347179..2347838	Pseudomonas mendocina ymp	5109464
YP_001187617.1	CDS	Pmen_2125	NC_009439.1	2347893	2348642	D	hypothetical protein	2347893..2348642	Pseudomonas mendocina ymp	5109465
YP_001187618.1	CDS	Pmen_2126	NC_009439.1	2349802	2350131	R	PFAM: plasmid stabilization system; plasmid stabilization system protein	complement(2349802..2350131)	Pseudomonas mendocina ymp	5109466
YP_001187619.1	CDS	Pmen_2127	NC_009439.1	2350128	2350364	R	TIGRFAM: putative addiction module antidote protein, CC2985 family; CopG/Arc/MetJ family transcriptional regulator	complement(2350128..2350364)	Pseudomonas mendocina ymp	5109467
YP_001187620.1	CDS	Pmen_2128	NC_009439.1	2350810	2351016	D	hypothetical protein	2350810..2351016	Pseudomonas mendocina ymp	5109468
YP_001187621.1	CDS	Pmen_2129	NC_009439.1	2351124	2352266	D	hypothetical protein	2351124..2352266	Pseudomonas mendocina ymp	5109469
YP_001187622.1	CDS	Pmen_2130	NC_009439.1	2352301	2352873	D	PFAM: Elongation factor P/YeiP protein; Elongation factor, KOW domain protein; translation initiation factor 5A (eIF-5A)	2352301..2352873	Pseudomonas mendocina ymp	5109470
YP_001187623.1	CDS	Pmen_2131	NC_009439.1	2352962	2353957	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(2352962..2353957)	Pseudomonas mendocina ymp	5109471
YP_001187624.1	CDS	Pmen_2132	NC_009439.1	2354026	2354790	D	PFAM: protein of unknown function DUF81; hypothetical protein	2354026..2354790	Pseudomonas mendocina ymp	5109472
YP_001187625.1	CDS	Pmen_2133	NC_009439.1	2354785	2355639	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(2354785..2355639)	Pseudomonas mendocina ymp	5109473
YP_001187626.1	CDS	Pmen_2134	NC_009439.1	2355737	2355961	D	PFAM: protein of unknown function DUF1127; hypothetical protein	2355737..2355961	Pseudomonas mendocina ymp	5109474
YP_001187627.1	CDS	Pmen_2135	NC_009439.1	2355985	2356929	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	2355985..2356929	Pseudomonas mendocina ymp	5109475
YP_001187628.1	CDS	Pmen_2136	NC_009439.1	2356929	2357402	D	hypothetical protein	2356929..2357402	Pseudomonas mendocina ymp	5109476
YP_001187629.1	CDS	Pmen_2137	NC_009439.1	2357417	2358610	D	PFAM: protein of unknown function DUF1006; hypothetical protein	2357417..2358610	Pseudomonas mendocina ymp	5109477
YP_001187630.1	CDS	Pmen_2138	NC_009439.1	2358607	2358996	R	PFAM: protein of unknown function DUF1311; hypothetical protein	complement(2358607..2358996)	Pseudomonas mendocina ymp	5109478
YP_001187631.1	CDS	Pmen_2139	NC_009439.1	2359041	2359796	R	PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p	complement(2359041..2359796)	Pseudomonas mendocina ymp	5109479
YP_001187632.1	CDS	Pmen_2140	NC_009439.1	2359957	2361342	R	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase	complement(2359957..2361342)	Pseudomonas mendocina ymp	5109480
YP_001187633.1	CDS	Pmen_2141	NC_009439.1	2361422	2362354	R	PFAM: Bile acid:sodium symporter; bile acid:sodium symporter	complement(2361422..2362354)	Pseudomonas mendocina ymp	5109481
YP_001187634.1	CDS	Pmen_2142	NC_009439.1	2362357	2363685	R	PFAM: flavin-containing monooxygenase FMO; flavin-containing monooxygenase	complement(2362357..2363685)	Pseudomonas mendocina ymp	5109482
YP_001187635.1	CDS	Pmen_2143	NC_009439.1	2363823	2364602	D	spermidine synthase-like protein	2363823..2364602	Pseudomonas mendocina ymp	5109483
YP_001187636.1	CDS	Pmen_2144	NC_009439.1	2364939	2366621	D	PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase	2364939..2366621	Pseudomonas mendocina ymp	5109484
YP_001187637.1	CDS	Pmen_2145	NC_009439.1	2366708	2367109	R	hypothetical protein	complement(2366708..2367109)	Pseudomonas mendocina ymp	5109485
YP_001187638.1	CDS	Pmen_2146	NC_009439.1	2367249	2367746	R	PFAM: uncharacterised conserved protein UCP030820; hypothetical protein	complement(2367249..2367746)	Pseudomonas mendocina ymp	5109486
YP_001187639.1	CDS	Pmen_2147	NC_009439.1	2367730	2369388	R	PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; sulfite reductase	complement(2367730..2369388)	Pseudomonas mendocina ymp	5109487
YP_001187640.1	CDS	Pmen_2148	NC_009439.1	2369581	2369736	D	hypothetical protein	2369581..2369736	Pseudomonas mendocina ymp	5109488
YP_001187641.1	CDS	Pmen_2149	NC_009439.1	2369792	2370892	D	PFAM: periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator	2369792..2370892	Pseudomonas mendocina ymp	5109489
YP_001187642.1	CDS	Pmen_2150	NC_009439.1	2370893	2371120	R	hypothetical protein	complement(2370893..2371120)	Pseudomonas mendocina ymp	5109490
YP_001187643.1	CDS	Pmen_2151	NC_009439.1	2371275	2374493	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase	2371275..2374493	Pseudomonas mendocina ymp	5109491
YP_001187644.1	CDS	Pmen_2152	NC_009439.1	2374539	2375366	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	2374539..2375366	Pseudomonas mendocina ymp	5109492
YP_001187645.1	CDS	Pmen_2153	NC_009439.1	2375389	2376816	D	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	2375389..2376816	Pseudomonas mendocina ymp	5109493
YP_001187646.1	CDS	Pmen_2154	NC_009439.1	2376854	2378737	R	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(2376854..2378737)	Pseudomonas mendocina ymp	5109494
YP_001187647.1	CDS	Pmen_2155	NC_009439.1	2378876	2379916	R	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N	complement(2378876..2379916)	Pseudomonas mendocina ymp	5109495
YP_001187648.1	CDS	Pmen_2156	NC_009439.1	2379932	2380957	R	hypothetical protein	complement(2379932..2380957)	Pseudomonas mendocina ymp	5109496
YP_001187649.1	CDS	Pmen_2157	NC_009439.1	2381096	2381389	D	hypothetical protein	2381096..2381389	Pseudomonas mendocina ymp	5109497
YP_001187650.1	CDS	Pmen_2158	NC_009439.1	2381640	2381972	R	osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE	complement(2381640..2381972)	Pseudomonas mendocina ymp	5109498
YP_001187651.1	CDS	metH	NC_009439.1	2382098	2385808	R	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase	complement(2382098..2385808)	Pseudomonas mendocina ymp	5109499
YP_001187652.1	CDS	Pmen_2160	NC_009439.1	2385961	2388237	D	PFAM: fatty acid cistrans isomerase; fatty acid cistrans isomerase	2385961..2388237	Pseudomonas mendocina ymp	5109500
YP_001187653.1	CDS	Pmen_2161	NC_009439.1	2388353	2388937	D	PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein; HesB/YadR/YfhF-family protein	2388353..2388937	Pseudomonas mendocina ymp	5109501
YP_001187654.1	CDS	Pmen_2162	NC_009439.1	2388992	2389501	R	PFAM: HPP family protein+B94; HPP family protein	complement(2388992..2389501)	Pseudomonas mendocina ymp	5109502
YP_001187655.1	CDS	Pmen_2163	NC_009439.1	2389495	2389731	R	PFAM: protein of unknown function DUF1272; hypothetical protein	complement(2389495..2389731)	Pseudomonas mendocina ymp	5109503
YP_001187656.1	CDS	Pmen_2164	NC_009439.1	2389724	2390746	R	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; transcriptional regulator	complement(2389724..2390746)	Pseudomonas mendocina ymp	5109504
YP_001187657.1	CDS	Pmen_2165	NC_009439.1	2390864	2391133	R	hypothetical protein	complement(2390864..2391133)	Pseudomonas mendocina ymp	5109505
YP_001187658.1	CDS	Pmen_2166	NC_009439.1	2391315	2392520	R	hypothetical protein	complement(2391315..2392520)	Pseudomonas mendocina ymp	5109506
YP_001187659.1	CDS	Pmen_2167	NC_009439.1	2392556	2394430	R	hypothetical protein	complement(2392556..2394430)	Pseudomonas mendocina ymp	5109507
YP_001187660.1	CDS	Pmen_2168	NC_009439.1	2394454	2395755	R	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	complement(2394454..2395755)	Pseudomonas mendocina ymp	5109508
YP_001187661.1	CDS	Pmen_2169	NC_009439.1	2396085	2397320	D	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; sigma-54 dependent trancsriptional regulator	2396085..2397320	Pseudomonas mendocina ymp	5109509
YP_001187662.1	CDS	Pmen_2170	NC_009439.1	2397391	2397858	D	hypothetical protein	2397391..2397858	Pseudomonas mendocina ymp	5109510
YP_001187663.1	CDS	Pmen_2171	NC_009439.1	2397826	2398377	R	NAD metabolism ATPase/kinase-like protein	complement(2397826..2398377)	Pseudomonas mendocina ymp	5109511
YP_001187664.1	CDS	Pmen_2172	NC_009439.1	2398374	2398943	R	TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC	complement(2398374..2398943)	Pseudomonas mendocina ymp	5109512
YP_001187665.1	CDS	Pmen_2173	NC_009439.1	2398993	2399607	R	hypothetical protein	complement(2398993..2399607)	Pseudomonas mendocina ymp	5109513
YP_001187666.1	CDS	Pmen_2174	NC_009439.1	2399615	2401249	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer	complement(2399615..2401249)	Pseudomonas mendocina ymp	5109514
YP_001187667.1	CDS	Pmen_2175	NC_009439.1	2401491	2402321	D	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase	2401491..2402321	Pseudomonas mendocina ymp	5109515
YP_001187668.1	CDS	Pmen_2176	NC_009439.1	2402318	2403040	D	PFAM: Cold-shock protein, DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; hypothetical protein	2402318..2403040	Pseudomonas mendocina ymp	5109516
YP_001187669.1	CDS	Pmen_2177	NC_009439.1	2403026	2403391	R	PFAM: protein of unknown function DUF419; hypothetical protein	complement(2403026..2403391)	Pseudomonas mendocina ymp	5109517
YP_001187670.1	CDS	Pmen_2178	NC_009439.1	2403411	2404298	R	streptomycin 3'-adenyltransferase; aminoglycoside resistance protein	complement(2403411..2404298)	Pseudomonas mendocina ymp	5109518
YP_001187671.1	CDS	Pmen_2179	NC_009439.1	2404436	2405824	R	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein	complement(2404436..2405824)	Pseudomonas mendocina ymp	5109519
YP_001187672.1	CDS	Pmen_2180	NC_009439.1	2405821	2409000	R	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein	complement(2405821..2409000)	Pseudomonas mendocina ymp	5109520
YP_001187673.1	CDS	Pmen_2181	NC_009439.1	2409028	2410266	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	complement(2409028..2410266)	Pseudomonas mendocina ymp	5109521
YP_001187674.1	CDS	Pmen_2182	NC_009439.1	2410437	2411978	R	PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic	complement(2410437..2411978)	Pseudomonas mendocina ymp	5109522
YP_001187675.1	CDS	Pmen_2183	NC_009439.1	2412164	2413078	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(2412164..2413078)	Pseudomonas mendocina ymp	5109523
YP_001187676.1	CDS	Pmen_2184	NC_009439.1	2413296	2414318	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	2413296..2414318	Pseudomonas mendocina ymp	5109524
YP_001187677.1	CDS	Pmen_2185	NC_009439.1	2414379	2415272	D	PFAM: response regulator receiver; CheW domain protein; putative CheW protein	2414379..2415272	Pseudomonas mendocina ymp	5109525
YP_001187678.1	CDS	Pmen_2186	NC_009439.1	2415669	2416538	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	2415669..2416538	Pseudomonas mendocina ymp	5109526
YP_001187679.1	CDS	Pmen_2187	NC_009439.1	2416604	2417989	R	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; magnesium transporter	complement(2416604..2417989)	Pseudomonas mendocina ymp	5109527
YP_001187680.1	CDS	Pmen_2188	NC_009439.1	2418544	2419833	R	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase	complement(2418544..2419833)	Pseudomonas mendocina ymp	5109528
YP_001187681.1	CDS	Pmen_2189	NC_009439.1	2419870	2421369	D	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator	2419870..2421369	Pseudomonas mendocina ymp	5109529
YP_001187682.1	CDS	Pmen_2190	NC_009439.1	2421403	2422656	R	PFAM: outer membrane porin; outer membrane porin	complement(2421403..2422656)	Pseudomonas mendocina ymp	5109530
YP_001187683.1	CDS	Pmen_2191	NC_009439.1	2423069	2423395	D	hypothetical protein	2423069..2423395	Pseudomonas mendocina ymp	5109531
YP_001187684.1	CDS	Pmen_2192	NC_009439.1	2423392	2423811	D	hypothetical protein	2423392..2423811	Pseudomonas mendocina ymp	5109137
YP_001187685.1	CDS	Pmen_2193	NC_009439.1	2423814	2424494	R	ICC-like putative phosphoesterase	complement(2423814..2424494)	Pseudomonas mendocina ymp	5109138
YP_001187686.1	CDS	Pmen_2194	NC_009439.1	2424508	2427120	R	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase	complement(2424508..2427120)	Pseudomonas mendocina ymp	5109139
YP_001187687.1	CDS	Pmen_2195	NC_009439.1	2427120	2428778	R	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase	complement(2427120..2428778)	Pseudomonas mendocina ymp	5109140
YP_001187688.1	CDS	Pmen_2196	NC_009439.1	2428775	2429782	R	RNA procession exonuclease-like protein	complement(2428775..2429782)	Pseudomonas mendocina ymp	5109141
YP_001187689.1	CDS	Pmen_2197	NC_009439.1	2430113	2430433	D	PFAM: cytochrome c, class I; cytochrome c, class I	2430113..2430433	Pseudomonas mendocina ymp	5109142
YP_001187690.1	CDS	Pmen_2198	NC_009439.1	2430468	2431001	D	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein	2430468..2431001	Pseudomonas mendocina ymp	5109143
YP_001187691.1	CDS	Pmen_2199	NC_009439.1	2431004	2433196	D	PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase	2431004..2433196	Pseudomonas mendocina ymp	5109144
YP_001187692.1	CDS	Pmen_2200	NC_009439.1	2433238	2434386	R	PFAM: protein of unknown function DUF182; hypothetical protein	complement(2433238..2434386)	Pseudomonas mendocina ymp	5109145
YP_001187693.1	CDS	Pmen_2201	NC_009439.1	2434607	2435509	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	2434607..2435509	Pseudomonas mendocina ymp	5109146
YP_001187694.1	CDS	Pmen_2202	NC_009439.1	2435506	2436027	R	PFAM: DinB family protein; DinB family protein	complement(2435506..2436027)	Pseudomonas mendocina ymp	5109147
YP_001187695.1	CDS	Pmen_2203	NC_009439.1	2436352	2438055	D	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	2436352..2438055	Pseudomonas mendocina ymp	5109148
YP_001187696.1	CDS	Pmen_2204	NC_009439.1	2438082	2439017	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(2438082..2439017)	Pseudomonas mendocina ymp	5109149
YP_001187697.1	CDS	Pmen_2205	NC_009439.1	2439173	2440075	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(2439173..2440075)	Pseudomonas mendocina ymp	5109150
YP_001187698.1	CDS	Pmen_2206	NC_009439.1	2440203	2441033	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KR; short-chain dehydrogenase/reductase SDR	2440203..2441033	Pseudomonas mendocina ymp	5109151
YP_001187699.1	CDS	Pmen_2207	NC_009439.1	2441067	2441327	D	hypothetical protein	2441067..2441327	Pseudomonas mendocina ymp	5109152
YP_001187700.1	CDS	Pmen_2208	NC_009439.1	2441715	2441987	R	PFAM: CopG domain protein DNA-binding domain protein; CopG family transcriptional regulator	complement(2441715..2441987)	Pseudomonas mendocina ymp	5109153
YP_001187701.1	CDS	Pmen_2209	NC_009439.1	2442547	2442891	D	hypothetical protein	2442547..2442891	Pseudomonas mendocina ymp	5109154
YP_001187702.1	CDS	Pmen_2210	NC_009439.1	2442981	2444243	D	PFAM: outer membrane efflux protein; outer membrane efflux protein	2442981..2444243	Pseudomonas mendocina ymp	5109155
YP_001187703.1	CDS	Pmen_2211	NC_009439.1	2444240	2445700	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	2444240..2445700	Pseudomonas mendocina ymp	5109156
YP_001187704.1	CDS	Pmen_2212	NC_009439.1	2445697	2448846	D	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux protein	2445697..2448846	Pseudomonas mendocina ymp	5109157
YP_001187705.1	CDS	Pmen_2213	NC_009439.1	2448992	2449324	D	hypothetical protein	2448992..2449324	Pseudomonas mendocina ymp	5109158
YP_001187706.1	CDS	Pmen_2214	NC_009439.1	2449480	2450802	D	PFAM: outer membrane porin; outer membrane porin	2449480..2450802	Pseudomonas mendocina ymp	5109159
YP_001187707.1	CDS	Pmen_2215	NC_009439.1	2450981	2451442	R	PFAM: protein of unknown function DUF411; hypothetical protein	complement(2450981..2451442)	Pseudomonas mendocina ymp	5109160
YP_001187708.1	CDS	Pmen_2216	NC_009439.1	2451414	2452256	R	hypothetical protein	complement(2451414..2452256)	Pseudomonas mendocina ymp	5109161
YP_001187709.1	CDS	Pmen_2217	NC_009439.1	2452266	2453357	R	PFAM: copper resistance B precursor; copper resistance B	complement(2452266..2453357)	Pseudomonas mendocina ymp	5109162
YP_001187710.1	CDS	Pmen_2218	NC_009439.1	2453347	2453658	R	hypothetical protein	complement(2453347..2453658)	Pseudomonas mendocina ymp	5109163
YP_001187711.1	CDS	Pmen_2219	NC_009439.1	2453671	2455485	R	TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; CopA family copper resistance protein	complement(2453671..2455485)	Pseudomonas mendocina ymp	5109164
YP_001187712.1	CDS	Pmen_2220	NC_009439.1	2455674	2455880	R	hypothetical protein	complement(2455674..2455880)	Pseudomonas mendocina ymp	5109165
YP_001187713.1	CDS	Pmen_2221	NC_009439.1	2456164	2456424	D	hypothetical protein	2456164..2456424	Pseudomonas mendocina ymp	5109166
YP_001187714.1	CDS	Pmen_2222	NC_009439.1	2456469	2457305	D	PFAM: protein of unknown function DUF692; hypothetical protein	2456469..2457305	Pseudomonas mendocina ymp	5109167
YP_001187715.1	CDS	Pmen_2223	NC_009439.1	2457302	2458096	D	hypothetical protein	2457302..2458096	Pseudomonas mendocina ymp	5109168
YP_001187716.1	CDS	Pmen_2224	NC_009439.1	2458147	2458461	D	hypothetical protein	2458147..2458461	Pseudomonas mendocina ymp	5109169
YP_001187717.1	CDS	Pmen_2225	NC_009439.1	2458481	2458681	R	PFAM: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein	complement(2458481..2458681)	Pseudomonas mendocina ymp	5109170
YP_001187718.1	CDS	Pmen_2227	NC_009439.1	2459164	2459469	R	PFAM: transcriptional regulator PadR family protein; PadR family transcriptional regulator	complement(2459164..2459469)	Pseudomonas mendocina ymp	5106591
YP_001187719.1	CDS	Pmen_2228	NC_009439.1	2459480	2460685	R	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; chromate transporter	complement(2459480..2460685)	Pseudomonas mendocina ymp	5109172
YP_001187720.1	CDS	Pmen_2229	NC_009439.1	2461028	2463391	R	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; copper-translocating P-type ATPase	complement(2461028..2463391)	Pseudomonas mendocina ymp	5109173
YP_001187721.1	CDS	Pmen_2230	NC_009439.1	2463397	2463645	R	hypothetical protein	complement(2463397..2463645)	Pseudomonas mendocina ymp	5109174
YP_001187722.1	CDS	Pmen_2231	NC_009439.1	2463725	2464258	R	PFAM: blue (type 1) copper domain protein; blue (type1) copper domain-containing protein	complement(2463725..2464258)	Pseudomonas mendocina ymp	5109175
YP_001187723.1	CDS	Pmen_2232	NC_009439.1	2464406	2464963	R	hypothetical protein	complement(2464406..2464963)	Pseudomonas mendocina ymp	5109176
YP_001187724.1	CDS	Pmen_2233	NC_009439.1	2465130	2465489	R	hypothetical protein	complement(2465130..2465489)	Pseudomonas mendocina ymp	5109177
YP_001187725.1	CDS	Pmen_2234	NC_009439.1	2465696	2466373	D	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; two component heavy metal response transcriptional regulator	2465696..2466373	Pseudomonas mendocina ymp	5109178
YP_001187726.1	CDS	Pmen_2235	NC_009439.1	2466376	2467752	D	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; heavy metal sensor signal transduction histidine kinase	2466376..2467752	Pseudomonas mendocina ymp	5109179
YP_001187727.1	CDS	Pmen_2236	NC_009439.1	2467788	2468408	R	hypothetical protein	complement(2467788..2468408)	Pseudomonas mendocina ymp	5109180
YP_001187728.1	CDS	Pmen_2237	NC_009439.1	2468803	2469045	R	hypothetical protein	complement(2468803..2469045)	Pseudomonas mendocina ymp	5109181
YP_001187729.1	CDS	Pmen_2238	NC_009439.1	2469164	2469550	R	hypothetical protein	complement(2469164..2469550)	Pseudomonas mendocina ymp	5109182
YP_001187730.1	CDS	Pmen_2239	NC_009439.1	2470166	2470846	R	hypothetical protein	complement(2470166..2470846)	Pseudomonas mendocina ymp	5109183
YP_001187731.1	CDS	Pmen_2240	NC_009439.1	2470859	2471596	R	hypothetical protein	complement(2470859..2471596)	Pseudomonas mendocina ymp	5109184
YP_001187732.1	CDS	Pmen_2241	NC_009439.1	2471644	2471985	R	hypothetical protein	complement(2471644..2471985)	Pseudomonas mendocina ymp	5109185
YP_001187733.1	CDS	Pmen_2242	NC_009439.1	2472092	2472385	D	PFAM: protein of unknown function DUF156; hypothetical protein	2472092..2472385	Pseudomonas mendocina ymp	5109186
YP_001187734.1	CDS	Pmen_2243	NC_009439.1	2472394	2473521	D	PFAM: high-affinity nickel-transporter; high-affinity nickel-transporter	2472394..2473521	Pseudomonas mendocina ymp	5109187
YP_001187735.1	CDS	Pmen_2244	NC_009439.1	2473522	2473962	D	hypothetical protein	2473522..2473962	Pseudomonas mendocina ymp	5109188
YP_001187736.1	CDS	Pmen_2245	NC_009439.1	2473962	2474663	D	PFAM: TraX family protein; TraX family protein	2473962..2474663	Pseudomonas mendocina ymp	5109189
YP_001187737.1	CDS	Pmen_2246	NC_009439.1	2474945	2475268	R	SMART: Rhodanese domain protein; rhodanese domain-containing protein	complement(2474945..2475268)	Pseudomonas mendocina ymp	5109190
YP_001187738.1	CDS	Pmen_2247	NC_009439.1	2475278	2476639	R	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; chromate transporter	complement(2475278..2476639)	Pseudomonas mendocina ymp	5109191
YP_001187739.1	CDS	Pmen_2248	NC_009439.1	2476632	2477552	R	hypothetical protein	complement(2476632..2477552)	Pseudomonas mendocina ymp	5109192
YP_001187740.1	CDS	Pmen_2249	NC_009439.1	2477854	2478813	R	PFAM: phage integrase family protein; phage integrase family protein	complement(2477854..2478813)	Pseudomonas mendocina ymp	5109193
YP_001187741.1	CDS	Pmen_2250	NC_009439.1	2478996	2479898	D	hypothetical protein	2478996..2479898	Pseudomonas mendocina ymp	5109194
YP_001187742.1	CDS	Pmen_2251	NC_009439.1	2479895	2481163	R	hypothetical protein	complement(2479895..2481163)	Pseudomonas mendocina ymp	5109195
YP_001187743.1	CDS	Pmen_2252	NC_009439.1	2481192	2482139	R	hypothetical protein	complement(2481192..2482139)	Pseudomonas mendocina ymp	5109196
YP_001187744.1	CDS	Pmen_2253	NC_009439.1	2482149	2484056	R	hypothetical protein	complement(2482149..2484056)	Pseudomonas mendocina ymp	5109197
YP_001187745.1	CDS	Pmen_2254	NC_009439.1	2485164	2486336	D	hypothetical protein	2485164..2486336	Pseudomonas mendocina ymp	5109198
YP_001187746.1	CDS	Pmen_2255	NC_009439.1	2486347	2487066	D	hypothetical protein	2486347..2487066	Pseudomonas mendocina ymp	5109199
YP_001187747.1	CDS	Pmen_2256	NC_009439.1	2487157	2487417	R	hypothetical protein	complement(2487157..2487417)	Pseudomonas mendocina ymp	5109200
YP_001187748.1	CDS	Pmen_2257	NC_009439.1	2487457	2487966	R	PFAM: protein of unknown function DUF892; hypothetical protein	complement(2487457..2487966)	Pseudomonas mendocina ymp	5109201
YP_001187749.1	CDS	Pmen_2258	NC_009439.1	2488132	2488413	R	hypothetical protein	complement(2488132..2488413)	Pseudomonas mendocina ymp	5109202
YP_001187750.1	CDS	Pmen_2260	NC_009439.1	2489829	2491130	D	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	2489829..2491130	Pseudomonas mendocina ymp	5106592
YP_001187751.1	CDS	Pmen_2261	NC_009439.1	2491546	2492016	R	hypothetical protein	complement(2491546..2492016)	Pseudomonas mendocina ymp	5109204
YP_001187752.1	CDS	Pmen_2262	NC_009439.1	2492103	2492567	R	hypothetical protein	complement(2492103..2492567)	Pseudomonas mendocina ymp	5109205
YP_001187753.1	CDS	Pmen_2263	NC_009439.1	2492697	2493248	R	PFAM: peptidase S14, ClpP; peptidase S14, ClpP	complement(2492697..2493248)	Pseudomonas mendocina ymp	5109206
YP_001187754.1	CDS	Pmen_2264	NC_009439.1	2493627	2494040	D	hypothetical protein	2493627..2494040	Pseudomonas mendocina ymp	5109207
YP_001187755.1	CDS	Pmen_2265	NC_009439.1	2494120	2494578	R	hypothetical protein	complement(2494120..2494578)	Pseudomonas mendocina ymp	5109208
YP_001187756.1	CDS	Pmen_2266	NC_009439.1	2494600	2495610	D	TIGRFAM: cytochrome c, monohaem; PFAM: cytochrome c oxidase, subunit II; mono-heme cytochrome c	2494600..2495610	Pseudomonas mendocina ymp	5109209
YP_001187757.1	CDS	Pmen_2267	NC_009439.1	2495607	2498138	D	PFAM: cytochrome c oxidase, subunit I; cytochrome-c oxidase	2495607..2498138	Pseudomonas mendocina ymp	5109210
YP_001187758.1	CDS	Pmen_2268	NC_009439.1	2498138	2498491	D	hypothetical protein	2498138..2498491	Pseudomonas mendocina ymp	5109211
YP_001187759.1	CDS	Pmen_2269	NC_009439.1	2498482	2499297	D	hypothetical protein	2498482..2499297	Pseudomonas mendocina ymp	5109212
YP_001187760.1	CDS	Pmen_2270	NC_009439.1	2499971	2500423	D	hypothetical protein	2499971..2500423	Pseudomonas mendocina ymp	5109213
YP_001187761.1	CDS	Pmen_2271	NC_009439.1	2500557	2500781	D	hypothetical protein	2500557..2500781	Pseudomonas mendocina ymp	5109214
YP_001187762.1	CDS	Pmen_2272	NC_009439.1	2500886	2501212	D	hypothetical protein	2500886..2501212	Pseudomonas mendocina ymp	5109215
YP_001187763.1	CDS	katE	NC_009439.1	2501421	2503562	R	Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; hydroperoxidase II	complement(2501421..2503562)	Pseudomonas mendocina ymp	5108508
YP_001187764.1	CDS	Pmen_2274	NC_009439.1	2503837	2504361	D	hypothetical protein	2503837..2504361	Pseudomonas mendocina ymp	5108509
YP_001187765.1	CDS	Pmen_2275	NC_009439.1	2504397	2505527	D	PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS	2504397..2505527	Pseudomonas mendocina ymp	5108510
YP_001187766.1	CDS	Pmen_2276	NC_009439.1	2505537	2506019	R	PFAM: CinA domain protein; CinA domain-containing protein	complement(2505537..2506019)	Pseudomonas mendocina ymp	5108511
YP_001187767.1	CDS	glgA	NC_009439.1	2506271	2507797	D	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase	2506271..2507797	Pseudomonas mendocina ymp	5108512
YP_001187768.1	CDS	Pmen_2278	NC_009439.1	2507797	2509551	D	TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; malto-oligosyltrehalose trehalohydrolase	2507797..2509551	Pseudomonas mendocina ymp	5108513
YP_001187769.1	CDS	Pmen_2279	NC_009439.1	2509548	2511602	D	TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase	2509548..2511602	Pseudomonas mendocina ymp	5108514
YP_001187770.1	CDS	Pmen_2280	NC_009439.1	2511595	2514339	D	TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; maltooligosyl trehalose synthase	2511595..2514339	Pseudomonas mendocina ymp	5108515
YP_001187771.1	CDS	Pmen_2281	NC_009439.1	2514356	2514625	D	hypothetical protein	2514356..2514625	Pseudomonas mendocina ymp	5108516
YP_001187772.1	CDS	Pmen_2282	NC_009439.1	2514636	2516750	D	TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX	2514636..2516750	Pseudomonas mendocina ymp	5108517
YP_001187773.1	CDS	Pmen_2283	NC_009439.1	2517049	2518317	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	2517049..2518317	Pseudomonas mendocina ymp	5108518
YP_001187774.1	CDS	Pmen_2284	NC_009439.1	2518346	2519134	D	PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase	2518346..2519134	Pseudomonas mendocina ymp	5108519
YP_001187775.1	CDS	Pmen_2285	NC_009439.1	2519131	2520333	D	PFAM: phospholipase D/Transphosphatidylase; cardiolipin synthase 2	2519131..2520333	Pseudomonas mendocina ymp	5108520
YP_001187776.1	CDS	Pmen_2286	NC_009439.1	2520330	2521310	D	hypothetical protein	2520330..2521310	Pseudomonas mendocina ymp	5108521
YP_001187777.1	CDS	Pmen_2287	NC_009439.1	2521421	2521678	D	hypothetical protein	2521421..2521678	Pseudomonas mendocina ymp	5108522
YP_001187778.1	CDS	Pmen_2288	NC_009439.1	2521685	2524156	R	TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase	complement(2521685..2524156)	Pseudomonas mendocina ymp	5108523
YP_001187779.1	CDS	Pmen_2289	NC_009439.1	2524347	2524778	D	hypothetical protein	2524347..2524778	Pseudomonas mendocina ymp	5108524
YP_001187780.1	CDS	Pmen_2290	NC_009439.1	2524775	2525872	D	hypothetical protein	2524775..2525872	Pseudomonas mendocina ymp	5108525
YP_001187781.1	CDS	Pmen_2291	NC_009439.1	2525859	2526629	D	dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein	2525859..2526629	Pseudomonas mendocina ymp	5108526
YP_001187782.1	CDS	Pmen_2292	NC_009439.1	2526695	2527108	D	PFAM: CBS domain containing protein; hypothetical protein	2526695..2527108	Pseudomonas mendocina ymp	5108527
YP_001187783.1	CDS	Pmen_2293	NC_009439.1	2527253	2529391	R	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein	complement(2527253..2529391)	Pseudomonas mendocina ymp	5108528
YP_001187784.1	CDS	Pmen_2294	NC_009439.1	2529406	2532708	R	TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; trehalose synthase	complement(2529406..2532708)	Pseudomonas mendocina ymp	5108529
YP_001187785.1	CDS	Pmen_2295	NC_009439.1	2532726	2534708	R	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase	complement(2532726..2534708)	Pseudomonas mendocina ymp	5108530
YP_001187786.1	CDS	Pmen_2296	NC_009439.1	2534841	2535365	R	PFAM: MgtC/SapB transporter; MgtC/SapB transporter	complement(2534841..2535365)	Pseudomonas mendocina ymp	5108531
YP_001187787.1	CDS	Pmen_2297	NC_009439.1	2535535	2535912	D	PFAM: Rho termination factor domain protein; Rho termination factor domain-containing protein	2535535..2535912	Pseudomonas mendocina ymp	5108532
YP_001187788.1	CDS	Pmen_2298	NC_009439.1	2536026	2536460	R	hypothetical protein	complement(2536026..2536460)	Pseudomonas mendocina ymp	5108533
YP_001187789.1	CDS	Pmen_2299	NC_009439.1	2536522	2536884	R	hypothetical protein	complement(2536522..2536884)	Pseudomonas mendocina ymp	5108534
YP_001187790.1	CDS	Pmen_2300	NC_009439.1	2536985	2538151	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	complement(2536985..2538151)	Pseudomonas mendocina ymp	5108535
YP_001187791.1	CDS	Pmen_2301	NC_009439.1	2538209	2539345	R	PFAM: glutamate--cysteine ligase, GCS2; glutamate--cysteine ligase	complement(2538209..2539345)	Pseudomonas mendocina ymp	5108536
YP_001187792.1	CDS	Pmen_2302	NC_009439.1	2539501	2540901	D	hypothetical protein	2539501..2540901	Pseudomonas mendocina ymp	5108537
YP_001187793.1	CDS	Pmen_2303	NC_009439.1	2540916	2541884	D	PFAM: methyltransferase small; methyltransferase small	2540916..2541884	Pseudomonas mendocina ymp	5108538
YP_001187794.1	CDS	Pmen_2304	NC_009439.1	2541927	2542394	R	PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein	complement(2541927..2542394)	Pseudomonas mendocina ymp	5108539
YP_001187795.1	CDS	Pmen_2305	NC_009439.1	2542473	2542643	R	hypothetical protein	complement(2542473..2542643)	Pseudomonas mendocina ymp	5108540
YP_001187796.1	CDS	Pmen_2306	NC_009439.1	2542758	2543612	R	PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	complement(2542758..2543612)	Pseudomonas mendocina ymp	5108541
YP_001187797.1	CDS	Pmen_2307	NC_009439.1	2543641	2544504	R	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UDP-glucose pyrophosphorylase	complement(2543641..2544504)	Pseudomonas mendocina ymp	5108542
YP_001187798.1	CDS	Pmen_2308	NC_009439.1	2544657	2544953	R	hypothetical protein	complement(2544657..2544953)	Pseudomonas mendocina ymp	5108543
YP_001187799.1	CDS	Pmen_2309	NC_009439.1	2545010	2545906	R	PFAM: 17 kDa surface antigen; 17 kDa surface antigen	complement(2545010..2545906)	Pseudomonas mendocina ymp	5108544
YP_001187800.1	CDS	Pmen_2310	NC_009439.1	2545993	2547798	R	PFAM: protein of unknown function DUF323; hypothetical protein	complement(2545993..2547798)	Pseudomonas mendocina ymp	5108545
YP_001187801.1	CDS	Pmen_2311	NC_009439.1	2547791	2548984	R	PFAM: protein of unknown function DUF214; hypothetical protein	complement(2547791..2548984)	Pseudomonas mendocina ymp	5108546
YP_001187802.1	CDS	Pmen_2312	NC_009439.1	2548984	2549688	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(2548984..2549688)	Pseudomonas mendocina ymp	5108547
YP_001187803.1	CDS	Pmen_2313	NC_009439.1	2549688	2552744	R	PFAM: protein kinase; tyrosine protein kinase; SMART: von Willebrand factor, type A; serine/threonine protein kinase; protein kinase	complement(2549688..2552744)	Pseudomonas mendocina ymp	5108548
YP_001187804.1	CDS	Pmen_2314	NC_009439.1	2552760	2553491	R	PFAM: protein phosphatase 2C domain protein; protein phosphatase 2C domain-containing protein	complement(2552760..2553491)	Pseudomonas mendocina ymp	5108549
YP_001187805.1	CDS	Pmen_2315	NC_009439.1	2553488	2554177	R	hypothetical protein	complement(2553488..2554177)	Pseudomonas mendocina ymp	5108550
YP_001187806.1	CDS	Pmen_2316	NC_009439.1	2554174	2557689	R	PFAM: ImcF domain protein; protein of unknown function DUF1215; ImcF domain-containing protein	complement(2554174..2557689)	Pseudomonas mendocina ymp	5108551
YP_001187807.1	CDS	Pmen_2317	NC_009439.1	2557686	2559047	R	PFAM: OmpA/MotB domain protein; hypothetical protein	complement(2557686..2559047)	Pseudomonas mendocina ymp	5108552
YP_001187808.1	CDS	Pmen_2318	NC_009439.1	2559054	2560388	R	PFAM: protein of unknown function DUF876; hypothetical protein	complement(2559054..2560388)	Pseudomonas mendocina ymp	5108553
YP_001187809.1	CDS	Pmen_2319	NC_009439.1	2560409	2560876	R	hypothetical protein	complement(2560409..2560876)	Pseudomonas mendocina ymp	5108554
YP_001187810.1	CDS	Pmen_2320	NC_009439.1	2560951	2562393	R	PFAM: Forkhead-associated protein; FHA domain-containing protein	complement(2560951..2562393)	Pseudomonas mendocina ymp	5108555
YP_001187811.1	CDS	Pmen_2321	NC_009439.1	2562769	2563791	D	PFAM: ImpA domain protein; ImpA domain-containing protein	2562769..2563791	Pseudomonas mendocina ymp	5108556
YP_001187812.1	CDS	Pmen_2322	NC_009439.1	2563855	2564370	D	PFAM: uncharacterised conserved protein UCP028301; hypothetical protein	2563855..2564370	Pseudomonas mendocina ymp	5108557
YP_001187813.1	CDS	Pmen_2323	NC_009439.1	2564386	2565882	D	PFAM: protein of unknown function DUF877; hypothetical protein	2564386..2565882	Pseudomonas mendocina ymp	5108558
YP_001187814.1	CDS	Pmen_2324	NC_009439.1	2565959	2566447	D	PFAM: protein of unknown function DUF796; hypothetical protein	2565959..2566447	Pseudomonas mendocina ymp	5108559
YP_001187815.1	CDS	Pmen_2325	NC_009439.1	2566521	2566952	D	hypothetical protein	2566521..2566952	Pseudomonas mendocina ymp	5108560
YP_001187816.1	CDS	Pmen_2326	NC_009439.1	2566949	2567395	D	hypothetical protein	2566949..2567395	Pseudomonas mendocina ymp	5108561
YP_001187817.1	CDS	Pmen_2327	NC_009439.1	2567442	2568227	D	PFAM: virulence protein, SciE type; virulence protein, SciE type	2567442..2568227	Pseudomonas mendocina ymp	5108562
YP_001187818.1	CDS	Pmen_2328	NC_009439.1	2568230	2568742	D	PFAM: GPW/gp25 family protein; GPW/gp25 family protein	2568230..2568742	Pseudomonas mendocina ymp	5108563
YP_001187819.1	CDS	Pmen_2329	NC_009439.1	2568739	2570598	D	PFAM: protein of unknown function DUF879; hypothetical protein	2568739..2570598	Pseudomonas mendocina ymp	5108564
YP_001187820.1	CDS	Pmen_2330	NC_009439.1	2570613	2571599	D	PFAM: protein of unknown function DUF1305; hypothetical protein	2570613..2571599	Pseudomonas mendocina ymp	5108565
YP_001187821.1	CDS	Pmen_2331	NC_009439.1	2571592	2574294	D	PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase	2571592..2574294	Pseudomonas mendocina ymp	5108566
YP_001187822.1	CDS	Pmen_2332	NC_009439.1	2574325	2576550	D	PFAM: Rhs element Vgr protein; Gp5 domain protein; Rhs element Vgr protein	2574325..2576550	Pseudomonas mendocina ymp	5108567
YP_001187823.1	CDS	Pmen_2333	NC_009439.1	2576561	2576995	D	hypothetical protein	2576561..2576995	Pseudomonas mendocina ymp	5108568
YP_001187824.1	CDS	Pmen_2334	NC_009439.1	2577010	2578122	D	hypothetical protein	2577010..2578122	Pseudomonas mendocina ymp	5108569
YP_001187825.1	CDS	Pmen_2335	NC_009439.1	2578122	2579159	D	catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase	2578122..2579159	Pseudomonas mendocina ymp	5108570
YP_001187826.1	CDS	Pmen_2336	NC_009439.1	2579159	2580244	D	hypothetical protein	2579159..2580244	Pseudomonas mendocina ymp	5108571
YP_001187827.1	CDS	Pmen_2337	NC_009439.1	2580257	2581153	D	hypothetical protein	2580257..2581153	Pseudomonas mendocina ymp	5108572
YP_001187828.1	CDS	Pmen_2338	NC_009439.1	2581197	2582438	D	hypothetical protein	2581197..2582438	Pseudomonas mendocina ymp	5108573
YP_001187829.1	CDS	Pmen_2339	NC_009439.1	2582493	2583542	R	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; UDP-galactose 4-epimerase	complement(2582493..2583542)	Pseudomonas mendocina ymp	5108574
YP_001187830.1	CDS	Pmen_2340	NC_009439.1	2583821	2585014	D	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	2583821..2585014	Pseudomonas mendocina ymp	5108575
YP_001187831.1	CDS	Pmen_2341	NC_009439.1	2585002	2586198	D	PFAM: UDP-galactopyranose mutase; UDP-galactopyranose mutase	2585002..2586198	Pseudomonas mendocina ymp	5108576
YP_001187832.1	CDS	Pmen_2342	NC_009439.1	2586208	2587350	D	hypothetical protein	2586208..2587350	Pseudomonas mendocina ymp	5108577
YP_001187833.1	CDS	Pmen_2343	NC_009439.1	2587347	2589122	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	2587347..2589122	Pseudomonas mendocina ymp	5108578
YP_001187834.1	CDS	Pmen_2344	NC_009439.1	2589274	2589579	D	hypothetical protein	2589274..2589579	Pseudomonas mendocina ymp	5108579
YP_001187835.1	CDS	Pmen_2345	NC_009439.1	2589592	2591796	R	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; xanthine dehydrogenase, molybdenum binding subunit apoprotein	complement(2589592..2591796)	Pseudomonas mendocina ymp	5108580
YP_001187836.1	CDS	Pmen_2346	NC_009439.1	2591793	2592782	R	PFAM: molybdopterin dehydrogenase, FAD-binding; FAD-binding molybdopterin dehydrogenase	complement(2591793..2592782)	Pseudomonas mendocina ymp	5108581
YP_001187837.1	CDS	Pmen_2347	NC_009439.1	2592779	2593288	R	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein	complement(2592779..2593288)	Pseudomonas mendocina ymp	5108582
YP_001187838.1	CDS	Pmen_2348	NC_009439.1	2593459	2594346	D	PFAM: protein of unknown function DUF72; hypothetical protein	2593459..2594346	Pseudomonas mendocina ymp	5108583
YP_001187839.1	CDS	Pmen_2349	NC_009439.1	2594365	2594742	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	complement(2594365..2594742)	Pseudomonas mendocina ymp	5108584
YP_001187840.1	CDS	Pmen_2350	NC_009439.1	2594745	2595368	R	PFAM: protein of unknown function UPF0126; hypothetical protein	complement(2594745..2595368)	Pseudomonas mendocina ymp	5108585
YP_001187841.1	CDS	Pmen_2351	NC_009439.1	2595376	2596734	R	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase	complement(2595376..2596734)	Pseudomonas mendocina ymp	5108193
YP_001187842.1	CDS	Pmen_2352	NC_009439.1	2596808	2597230	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	2596808..2597230	Pseudomonas mendocina ymp	5108194
YP_001187843.1	CDS	Pmen_2353	NC_009439.1	2597315	2598154	R	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UDP-glucose pyrophosphorylase	complement(2597315..2598154)	Pseudomonas mendocina ymp	5108195
YP_001187844.1	CDS	Pmen_2354	NC_009439.1	2598198	2599559	R	PFAM: UDP-glucose/GDP-mannose dehydrogenase; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; UDP-glucose 6-dehydrogenase	complement(2598198..2599559)	Pseudomonas mendocina ymp	5108196
YP_001187845.1	CDS	Pmen_2355	NC_009439.1	2599851	2601647	D	catalyzes the formation of acetate from pyruvate; thiamine pyrophosphate protein	2599851..2601647	Pseudomonas mendocina ymp	5108197
YP_001187846.1	CDS	Pmen_2356	NC_009439.1	2601650	2602882	R	PFAM: sodium/hydrogen exchanger; sodium/hydrogen exchanger	complement(2601650..2602882)	Pseudomonas mendocina ymp	5108198
YP_001187847.1	CDS	Pmen_2357	NC_009439.1	2603149	2604126	D	PFAM: short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase	2603149..2604126	Pseudomonas mendocina ymp	5108199
YP_001187848.1	CDS	Pmen_2358	NC_009439.1	2604220	2604549	R	hypothetical protein	complement(2604220..2604549)	Pseudomonas mendocina ymp	5108200
YP_001187849.1	CDS	Pmen_2359	NC_009439.1	2604843	2605019	D	hypothetical protein	2604843..2605019	Pseudomonas mendocina ymp	5108201
YP_001187850.1	CDS	Pmen_2360	NC_009439.1	2605166	2606149	D	PFAM: short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase	2605166..2606149	Pseudomonas mendocina ymp	5108202
YP_001187851.1	CDS	Pmen_2361	NC_009439.1	2606392	2607630	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase type 2	2606392..2607630	Pseudomonas mendocina ymp	5108203
YP_001187852.1	CDS	Pmen_2362	NC_009439.1	2607634	2608833	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase type 2	2607634..2608833	Pseudomonas mendocina ymp	5108204
YP_001187853.1	CDS	Pmen_2363	NC_009439.1	2608833	2610236	D	coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein	2608833..2610236	Pseudomonas mendocina ymp	5108205
YP_001187854.1	CDS	Pmen_2364	NC_009439.1	2610291	2611085	D	PFAM: NLPA lipoprotein; NLPA lipoprotein	2610291..2611085	Pseudomonas mendocina ymp	5108206
YP_001187855.1	CDS	Pmen_2365	NC_009439.1	2611087	2612184	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	2611087..2612184	Pseudomonas mendocina ymp	5108207
YP_001187856.1	CDS	Pmen_2366	NC_009439.1	2612168	2612821	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	2612168..2612821	Pseudomonas mendocina ymp	5108208
YP_001187857.1	CDS	Pmen_2367	NC_009439.1	2613040	2614008	R	PFAM: luciferase family protein; luciferase family protein	complement(2613040..2614008)	Pseudomonas mendocina ymp	5108209
YP_001187858.1	CDS	Pmen_2368	NC_009439.1	2614227	2616008	R	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; potassium efflux system protein	complement(2614227..2616008)	Pseudomonas mendocina ymp	5108210
YP_001187859.1	CDS	Pmen_2369	NC_009439.1	2616332	2616802	R	hypothetical protein	complement(2616332..2616802)	Pseudomonas mendocina ymp	5108211
YP_001187860.1	CDS	Pmen_2370	NC_009439.1	2617040	2619883	R	PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase	complement(2617040..2619883)	Pseudomonas mendocina ymp	5108212
YP_001187861.1	CDS	Pmen_2373	NC_009439.1	2621069	2621629	R	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	complement(2621069..2621629)	Pseudomonas mendocina ymp	5106597
YP_001187862.1	CDS	uvrC	NC_009439.1	2621663	2623486	R	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C	complement(2621663..2623486)	Pseudomonas mendocina ymp	5108214
YP_001187863.1	CDS	Pmen_2375	NC_009439.1	2623489	2624133	R	PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator	complement(2623489..2624133)	Pseudomonas mendocina ymp	5108215
YP_001187864.1	CDS	Pmen_2376	NC_009439.1	2624551	2625219	D	PFAM: protein of unknown function UPF0005; hypothetical protein	2624551..2625219	Pseudomonas mendocina ymp	5106598
YP_001187865.1	CDS	Pmen_2377	NC_009439.1	2625355	2625747	D	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD	2625355..2625747	Pseudomonas mendocina ymp	5108217
YP_001187866.1	CDS	Pmen_2378	NC_009439.1	2625748	2626107	D	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC	2625748..2626107	Pseudomonas mendocina ymp	5108218
YP_001187867.1	CDS	Pmen_2379	NC_009439.1	2626107	2626406	D	PFAM: DsrH family protein; DsrH family protein	2626107..2626406	Pseudomonas mendocina ymp	5108219
YP_001187868.1	CDS	Pmen_2380	NC_009439.1	2626403	2626738	D	PFAM: DsrC family protein; DsrC family protein	2626403..2626738	Pseudomonas mendocina ymp	5108220
YP_001187869.1	CDS	Pmen_2381	NC_009439.1	2626735	2627730	D	PFAM: glycosyl transferase, family 3; hypothetical protein	2626735..2627730	Pseudomonas mendocina ymp	5108221
YP_001187870.1	CDS	Pmen_2382	NC_009439.1	2627805	2628803	D	PFAM: Glutathione S-transferase, C-terminal domain; glutathione S-transferase domain-containing protein	2627805..2628803	Pseudomonas mendocina ymp	5108222
YP_001187871.1	CDS	Pmen_2383	NC_009439.1	2628848	2630236	R	TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase	complement(2628848..2630236)	Pseudomonas mendocina ymp	5108223
YP_001187872.1	CDS	Pmen_2384	NC_009439.1	2630393	2631673	R	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase	complement(2630393..2631673)	Pseudomonas mendocina ymp	5108224
YP_001187873.1	CDS	Pmen_2385	NC_009439.1	2631752	2632135	R	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB	complement(2631752..2632135)	Pseudomonas mendocina ymp	5108225
YP_001187874.1	CDS	Pmen_2386	NC_009439.1	2632132	2633454	R	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; recombination factor protein RarA	complement(2632132..2633454)	Pseudomonas mendocina ymp	5108226
YP_001187875.1	CDS	lolA	NC_009439.1	2633458	2634084	R	participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein	complement(2633458..2634084)	Pseudomonas mendocina ymp	5108227
YP_001187876.1	CDS	Pmen_2388	NC_009439.1	2634209	2636617	R	PFAM: cell divisionFtsK/SpoIIIE; DNA translocase FtsK	complement(2634209..2636617)	Pseudomonas mendocina ymp	5108228
YP_001187877.1	CDS	Pmen_2389	NC_009439.1	2636811	2637761	D	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase	2636811..2637761	Pseudomonas mendocina ymp	5108229
YP_001187878.1	CDS	aat	NC_009439.1	2637817	2638497	D	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase	2637817..2638497	Pseudomonas mendocina ymp	5108230
YP_001187879.1	CDS	Pmen_2391	NC_009439.1	2638552	2639259	D	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase	2638552..2639259	Pseudomonas mendocina ymp	5108231
YP_001187880.1	CDS	infA	NC_009439.1	2639395	2639613	D	stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1	2639395..2639613	Pseudomonas mendocina ymp	5108232
YP_001187881.1	CDS	Pmen_2393	NC_009439.1	2639674	2641944	R	TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpA	complement(2639674..2641944)	Pseudomonas mendocina ymp	5108233
YP_001187882.1	CDS	clpS	NC_009439.1	2641974	2642336	R	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS	complement(2641974..2642336)	Pseudomonas mendocina ymp	5108234
YP_001187883.1	CDS	Pmen_2395	NC_009439.1	2642568	2642837	D	TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding protein family protein	2642568..2642837	Pseudomonas mendocina ymp	5108235
YP_001187884.1	CDS	Pmen_2396	NC_009439.1	2642913	2644169	R	TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase	complement(2642913..2644169)	Pseudomonas mendocina ymp	5108236
YP_001187885.1	CDS	Pmen_2397	NC_009439.1	2644531	2646759	D	TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase	2644531..2646759	Pseudomonas mendocina ymp	5108237
YP_001187886.1	CDS	Pmen_2398	NC_009439.1	2646872	2647312	D	PFAM: NUDIX hydrolase; NUDIX hydrolase	2646872..2647312	Pseudomonas mendocina ymp	5108238
YP_001187887.1	CDS	mnmA	NC_009439.1	2647440	2648552	D	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA	2647440..2648552	Pseudomonas mendocina ymp	5108239
YP_001187888.1	CDS	Pmen_2400	NC_009439.1	2648549	2649169	D	HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein	2648549..2649169	Pseudomonas mendocina ymp	5108240
YP_001187889.1	CDS	Pmen_2401	NC_009439.1	2649172	2650035	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	2649172..2650035	Pseudomonas mendocina ymp	5108241
YP_001187890.1	CDS	Pmen_2402	NC_009439.1	2650184	2651554	D	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase	2650184..2651554	Pseudomonas mendocina ymp	5108242
YP_001187891.1	CDS	Pmen_2403	NC_009439.1	2651633	2652799	D	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji, jmjC domain protein; cupin 4 family protein	2651633..2652799	Pseudomonas mendocina ymp	5108243
YP_001187892.1	CDS	Pmen_2404	NC_009439.1	2652792	2653217	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	2652792..2653217	Pseudomonas mendocina ymp	5108244
YP_001187893.1	CDS	Pmen_2405	NC_009439.1	2653226	2653867	D	hypothetical protein	2653226..2653867	Pseudomonas mendocina ymp	5108245
YP_001187894.1	CDS	Pmen_2406	NC_009439.1	2653864	2654673	D	PFAM: NolW domain protein; NolW domain-containing protein	2653864..2654673	Pseudomonas mendocina ymp	5108246
YP_001187895.1	CDS	Pmen_2407	NC_009439.1	2655232	2656827	D	Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase	2655232..2656827	Pseudomonas mendocina ymp	5108247
YP_001187896.1	CDS	Pmen_2408	NC_009439.1	2657116	2659119	D	PFAM: protein of unknown function DUF839; hypothetical protein	2657116..2659119	Pseudomonas mendocina ymp	5108248
YP_001187897.1	CDS	Pmen_2409	NC_009439.1	2659248	2659886	D	hypothetical protein	2659248..2659886	Pseudomonas mendocina ymp	5108249
YP_001187898.1	CDS	Pmen_2410	NC_009439.1	2659905	2660426	R	hypothetical protein	complement(2659905..2660426)	Pseudomonas mendocina ymp	5108250
YP_001187899.1	CDS	Pmen_2411	NC_009439.1	2660490	2661893	R	hypothetical protein	complement(2660490..2661893)	Pseudomonas mendocina ymp	5108251
YP_001187900.1	CDS	Pmen_2412	NC_009439.1	2662393	2662806	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A	2662393..2662806	Pseudomonas mendocina ymp	5108252
YP_001187901.1	CDS	Pmen_2413	NC_009439.1	2662817	2663494	D	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B	2662817..2663494	Pseudomonas mendocina ymp	5108253
YP_001187902.1	CDS	Pmen_2414	NC_009439.1	2663557	2665338	D	NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D	2663557..2665338	Pseudomonas mendocina ymp	5108254
YP_001187903.1	CDS	Pmen_2415	NC_009439.1	2665340	2665852	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E	2665340..2665852	Pseudomonas mendocina ymp	5108255
YP_001187904.1	CDS	Pmen_2416	NC_009439.1	2665849	2667195	D	TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH-quinone oxidoreductase subunit F	2665849..2667195	Pseudomonas mendocina ymp	5108256
YP_001187905.1	CDS	Pmen_2417	NC_009439.1	2667254	2669962	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G	2667254..2669962	Pseudomonas mendocina ymp	5108257
YP_001187906.1	CDS	Pmen_2418	NC_009439.1	2669959	2670951	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H	2669959..2670951	Pseudomonas mendocina ymp	5108258
YP_001187907.1	CDS	Pmen_2419	NC_009439.1	2670965	2671513	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I	2670965..2671513	Pseudomonas mendocina ymp	5108259
YP_001187908.1	CDS	Pmen_2420	NC_009439.1	2671581	2672090	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J	2671581..2672090	Pseudomonas mendocina ymp	5108260
YP_001187909.1	CDS	Pmen_2421	NC_009439.1	2672087	2672395	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K	2672087..2672395	Pseudomonas mendocina ymp	5108261
YP_001187910.1	CDS	Pmen_2422	NC_009439.1	2672392	2674242	D	Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L	2672392..2674242	Pseudomonas mendocina ymp	5108262
YP_001187911.1	CDS	Pmen_2423	NC_009439.1	2674256	2675785	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M	2674256..2675785	Pseudomonas mendocina ymp	5108263
YP_001187912.1	CDS	Pmen_2424	NC_009439.1	2675789	2677273	D	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N	2675789..2677273	Pseudomonas mendocina ymp	5108264
YP_001187913.1	CDS	Pmen_2425	NC_009439.1	2677384	2678145	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; trans-aconitate 2-methyltransferase	complement(2677384..2678145)	Pseudomonas mendocina ymp	5108265
YP_001187914.1	CDS	Pmen_2426	NC_009439.1	2678449	2679456	D	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	2678449..2679456	Pseudomonas mendocina ymp	5108266
YP_001187915.1	CDS	Pmen_2427	NC_009439.1	2679476	2681527	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; diguanylate cyclase/phosphodiesterase	complement(2679476..2681527)	Pseudomonas mendocina ymp	5108267
YP_001187916.1	CDS	Pmen_2428	NC_009439.1	2681674	2683203	R	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein	complement(2681674..2683203)	Pseudomonas mendocina ymp	5108268
YP_001187917.1	CDS	Pmen_2429	NC_009439.1	2683200	2686304	R	PFAM: acriflavin resistance protein; acriflavin resistance protein	complement(2683200..2686304)	Pseudomonas mendocina ymp	5108269
YP_001187918.1	CDS	Pmen_2430	NC_009439.1	2686426	2689518	R	PFAM: acriflavin resistance protein; acriflavin resistance protein	complement(2686426..2689518)	Pseudomonas mendocina ymp	5108270
YP_001187919.1	CDS	Pmen_2431	NC_009439.1	2689515	2690822	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	complement(2689515..2690822)	Pseudomonas mendocina ymp	5108271
YP_001187920.1	CDS	Pmen_2432	NC_009439.1	2691759	2692259	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; thiol peroxidase	complement(2691759..2692259)	Pseudomonas mendocina ymp	5107308
YP_001187921.1	CDS	Pmen_2433	NC_009439.1	2692435	2696115	R	PFAM: protein of unknown function DUF490; hypothetical protein	complement(2692435..2696115)	Pseudomonas mendocina ymp	5107309
YP_001187922.1	CDS	Pmen_2434	NC_009439.1	2696112	2697839	R	PFAM: surface antigen (D15); surface antigen variable number repeat protein; surface antigen (D15)	complement(2696112..2697839)	Pseudomonas mendocina ymp	5107310
YP_001187923.1	CDS	Pmen_2435	NC_009439.1	2697907	2698551	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(2697907..2698551)	Pseudomonas mendocina ymp	5107311
YP_001187924.1	CDS	Pmen_2436	NC_009439.1	2698796	2699608	D	removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III	2698796..2699608	Pseudomonas mendocina ymp	5107312
YP_001187925.1	CDS	Pmen_2437	NC_009439.1	2699711	2701093	D	PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein	2699711..2701093	Pseudomonas mendocina ymp	5107313
YP_001187926.1	CDS	Pmen_2438	NC_009439.1	2701271	2702260	D	PFAM: Integral membrane protein TerC; integral membrane protein TerC	2701271..2702260	Pseudomonas mendocina ymp	5107314
YP_001187927.1	CDS	Pmen_2439	NC_009439.1	2702588	2703817	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	complement(2702588..2703817)	Pseudomonas mendocina ymp	5107315
YP_001187928.1	CDS	Pmen_2440	NC_009439.1	2703958	2704893	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	2703958..2704893	Pseudomonas mendocina ymp	5107316
YP_001187929.1	CDS	Pmen_2441	NC_009439.1	2704957	2705391	R	PFAM: DoxX family protein; DoxX family protein	complement(2704957..2705391)	Pseudomonas mendocina ymp	5107317
YP_001187930.1	CDS	Pmen_2442	NC_009439.1	2705497	2706912	R	PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase	complement(2705497..2706912)	Pseudomonas mendocina ymp	5107318
YP_001187931.1	CDS	Pmen_2443	NC_009439.1	2707191	2708018	D	PFAM: TatD-related deoxyribonuclease; Sec-independent protein translocase TatD	2707191..2708018	Pseudomonas mendocina ymp	5107319
YP_001187932.1	CDS	Pmen_2444	NC_009439.1	2708105	2709574	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	2708105..2709574	Pseudomonas mendocina ymp	5107320
YP_001187933.1	CDS	Pmen_2445	NC_009439.1	2709677	2710039	D	hypothetical protein	2709677..2710039	Pseudomonas mendocina ymp	5107321
YP_001187934.1	CDS	Pmen_2446	NC_009439.1	2710041	2710856	R	Acyl-CoA thioesterase-like protein	complement(2710041..2710856)	Pseudomonas mendocina ymp	5107322
YP_001187935.1	CDS	Pmen_2447	NC_009439.1	2710945	2711721	R	PFAM: CHAD domain containing protein; CHAD domain-containing protein	complement(2710945..2711721)	Pseudomonas mendocina ymp	5107323
YP_001187936.1	CDS	Pmen_2448	NC_009439.1	2711798	2713783	R	PFAM: transglutaminase domain protein; transglutaminase domain-containing protein	complement(2711798..2713783)	Pseudomonas mendocina ymp	5107324
YP_001187937.1	CDS	Pmen_2449	NC_009439.1	2713780	2714736	R	PFAM: protein of unknown function DUF58; hypothetical protein	complement(2713780..2714736)	Pseudomonas mendocina ymp	5107325
YP_001187938.1	CDS	Pmen_2450	NC_009439.1	2714736	2715653	R	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase	complement(2714736..2715653)	Pseudomonas mendocina ymp	5107326
YP_001187939.1	CDS	Pmen_2451	NC_009439.1	2715749	2717716	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(2715749..2717716)	Pseudomonas mendocina ymp	5107327
YP_001187940.1	CDS	Pmen_2452	NC_009439.1	2717838	2718443	R	hypothetical protein	complement(2717838..2718443)	Pseudomonas mendocina ymp	5107328
YP_001187941.1	CDS	Pmen_2453	NC_009439.1	2718443	2718721	R	hypothetical protein	complement(2718443..2718721)	Pseudomonas mendocina ymp	5107329
YP_001187942.1	CDS	Pmen_2454	NC_009439.1	2718762	2719883	R	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase	complement(2718762..2719883)	Pseudomonas mendocina ymp	5107330
YP_001187943.1	CDS	Pmen_2455	NC_009439.1	2719883	2720917	R	catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase	complement(2719883..2720917)	Pseudomonas mendocina ymp	5107331
YP_001187944.1	CDS	Pmen_2456	NC_009439.1	2721020	2722030	D	PFAM: Patatin; patatin	2721020..2722030	Pseudomonas mendocina ymp	5107332
YP_001187945.1	CDS	Pmen_2457	NC_009439.1	2722037	2723125	R	PFAM: protein of unknown function UPF0118; hypothetical protein	complement(2722037..2723125)	Pseudomonas mendocina ymp	5107333
YP_001187946.1	CDS	Pmen_2458	NC_009439.1	2723200	2724003	R	hypothetical protein	complement(2723200..2724003)	Pseudomonas mendocina ymp	5107334
YP_001187947.1	CDS	Pmen_2459	NC_009439.1	2724159	2725022	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(2724159..2725022)	Pseudomonas mendocina ymp	5107335
YP_001187948.1	CDS	Pmen_2460	NC_009439.1	2725019	2725822	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(2725019..2725822)	Pseudomonas mendocina ymp	5107336
YP_001187949.1	CDS	Pmen_2461	NC_009439.1	2725922	2726554	R	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	complement(2725922..2726554)	Pseudomonas mendocina ymp	5107337
YP_001187950.1	CDS	Pmen_2462	NC_009439.1	2726596	2727399	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; AraC family transcriptional regulator	complement(2726596..2727399)	Pseudomonas mendocina ymp	5107338
YP_001187951.1	CDS	Pmen_2463	NC_009439.1	2727458	2727901	R	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	complement(2727458..2727901)	Pseudomonas mendocina ymp	5107339
YP_001187952.1	CDS	Pmen_2464	NC_009439.1	2727957	2729624	R	PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase	complement(2727957..2729624)	Pseudomonas mendocina ymp	5107340
YP_001187953.1	CDS	Pmen_2465	NC_009439.1	2729765	2730223	R	TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase SixA	complement(2729765..2730223)	Pseudomonas mendocina ymp	5107341
YP_001187954.1	CDS	Pmen_2466	NC_009439.1	2730220	2730567	R	hypothetical protein	complement(2730220..2730567)	Pseudomonas mendocina ymp	5107342
YP_001187955.1	CDS	gpsA	NC_009439.1	2730596	2731618	R	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	complement(2730596..2731618)	Pseudomonas mendocina ymp	5107343
YP_001187956.1	CDS	Pmen_2468	NC_009439.1	2731890	2733785	D	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor hybrid histidine kinase	2731890..2733785	Pseudomonas mendocina ymp	5107344
YP_001187957.1	CDS	Pmen_2469	NC_009439.1	2734000	2734515	D	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase	2734000..2734515	Pseudomonas mendocina ymp	5107345
YP_001187958.1	CDS	Pmen_2470	NC_009439.1	2734527	2735747	D	FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase	2734527..2735747	Pseudomonas mendocina ymp	5107346
YP_001187959.1	CDS	Pmen_2471	NC_009439.1	2735838	2737115	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(2735838..2737115)	Pseudomonas mendocina ymp	5107347
YP_001187960.1	CDS	Pmen_2472	NC_009439.1	2737401	2737751	R	hypothetical protein	complement(2737401..2737751)	Pseudomonas mendocina ymp	5107348
YP_001187961.1	CDS	Pmen_2473	NC_009439.1	2737756	2738436	R	PFAM: Dual specificity protein phosphatase; putative tyrosine phosphatase; protein tyrosine/serine phosphatase	complement(2737756..2738436)	Pseudomonas mendocina ymp	5107349
YP_001187962.1	CDS	Pmen_2474	NC_009439.1	2738433	2739158	R	PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase	complement(2738433..2739158)	Pseudomonas mendocina ymp	5107350
YP_001187963.1	CDS	Pmen_2475	NC_009439.1	2739168	2741126	R	PFAM: sulfatase; sulfatase	complement(2739168..2741126)	Pseudomonas mendocina ymp	5107351
YP_001187964.1	CDS	Pmen_2476	NC_009439.1	2741230	2741913	D	PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	2741230..2741913	Pseudomonas mendocina ymp	5107352
YP_001187965.1	CDS	Pmen_2477	NC_009439.1	2741903	2743171	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	2741903..2743171	Pseudomonas mendocina ymp	5107353
YP_001187966.1	CDS	Pmen_2478	NC_009439.1	2743253	2743942	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase	2743253..2743942	Pseudomonas mendocina ymp	5107354
YP_001187967.1	CDS	Pmen_2479	NC_009439.1	2743944	2744648	D	PFAM: lipopolysaccharide kinase; lipopolysaccharide kinase	2743944..2744648	Pseudomonas mendocina ymp	5107355
YP_001187968.1	CDS	Pmen_2480	NC_009439.1	2744645	2745031	D	PFAM: diacylglycerol kinase; diacylglycerol kinase	2744645..2745031	Pseudomonas mendocina ymp	5107356
YP_001187969.1	CDS	Pmen_2481	NC_009439.1	2745032	2745496	R	hypothetical protein	complement(2745032..2745496)	Pseudomonas mendocina ymp	5107357
YP_001187970.1	CDS	Pmen_2482	NC_009439.1	2745563	2746573	R	PFAM: amidohydrolase 2; amidohydrolase 2	complement(2745563..2746573)	Pseudomonas mendocina ymp	5107358
YP_001187971.1	CDS	Pmen_2483	NC_009439.1	2746806	2748200	D	PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	2746806..2748200	Pseudomonas mendocina ymp	5107359
YP_001187972.1	CDS	Pmen_2484	NC_009439.1	2748260	2748661	D	PFAM: OsmC family protein; OsmC family protein	2748260..2748661	Pseudomonas mendocina ymp	5107360
YP_001187973.1	CDS	Pmen_2485	NC_009439.1	2748658	2749518	D	PFAM: Pirin domain protein domain protein; Pirin domain protein; pirin domain-containing protein	2748658..2749518	Pseudomonas mendocina ymp	5107361
YP_001187974.1	CDS	Pmen_2486	NC_009439.1	2749575	2750387	D	hypothetical protein	2749575..2750387	Pseudomonas mendocina ymp	5107362
YP_001187975.1	CDS	Pmen_2487	NC_009439.1	2750490	2751038	D	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor	2750490..2751038	Pseudomonas mendocina ymp	5107363
YP_001187976.1	CDS	Pmen_2488	NC_009439.1	2751035	2751748	D	hypothetical protein	2751035..2751748	Pseudomonas mendocina ymp	5107364
YP_001187977.1	CDS	Pmen_2489	NC_009439.1	2751913	2752692	D	hypothetical protein	2751913..2752692	Pseudomonas mendocina ymp	5107365
YP_001187978.1	CDS	Pmen_2490	NC_009439.1	2752757	2753545	R	PFAM: dienelactone hydrolase; dienelactone hydrolase	complement(2752757..2753545)	Pseudomonas mendocina ymp	5107366
YP_001187979.1	CDS	Pmen_2491	NC_009439.1	2753801	2755705	R	molecular chaperone; heat shock protein 90	complement(2753801..2755705)	Pseudomonas mendocina ymp	5107367
YP_001187980.1	CDS	Pmen_2492	NC_009439.1	2755790	2757037	R	hypothetical protein	complement(2755790..2757037)	Pseudomonas mendocina ymp	5107368
YP_001187981.1	CDS	Pmen_2493	NC_009439.1	2757089	2757535	R	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	complement(2757089..2757535)	Pseudomonas mendocina ymp	5107369
YP_001187982.1	CDS	Pmen_2494	NC_009439.1	2757532	2758011	R	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	complement(2757532..2758011)	Pseudomonas mendocina ymp	5107370
YP_001187983.1	CDS	Pmen_2495	NC_009439.1	2758195	2758455	D	hypothetical protein	2758195..2758455	Pseudomonas mendocina ymp	5107371
YP_001187984.1	CDS	Pmen_2496	NC_009439.1	2758509	2758901	R	hypothetical protein	complement(2758509..2758901)	Pseudomonas mendocina ymp	5107372
YP_001187985.1	CDS	Pmen_2497	NC_009439.1	2758898	2759632	R	PFAM: protein of unknown function DUF599; hypothetical protein	complement(2758898..2759632)	Pseudomonas mendocina ymp	5107373
YP_001187986.1	CDS	Pmen_2498	NC_009439.1	2759735	2761048	R	PFAM: branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein	complement(2759735..2761048)	Pseudomonas mendocina ymp	5107374
YP_001187987.1	CDS	Pmen_2499	NC_009439.1	2761526	2762413	R	Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha	complement(2761526..2762413)	Pseudomonas mendocina ymp	5107375
YP_001187988.1	CDS	sucC	NC_009439.1	2762413	2763579	R	catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta	complement(2762413..2763579)	Pseudomonas mendocina ymp	5107376
YP_001187989.1	CDS	Pmen_2501	NC_009439.1	2763820	2765256	R	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase	complement(2763820..2765256)	Pseudomonas mendocina ymp	5107377
YP_001187990.1	CDS	Pmen_2502	NC_009439.1	2765323	2766555	R	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase	complement(2765323..2766555)	Pseudomonas mendocina ymp	5107378
YP_001187991.1	CDS	sucA	NC_009439.1	2766621	2769452	R	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component	complement(2766621..2769452)	Pseudomonas mendocina ymp	5107379
YP_001187992.1	CDS	sdhB	NC_009439.1	2769703	2770410	R	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit	complement(2769703..2770410)	Pseudomonas mendocina ymp	5107380
YP_001187993.1	CDS	sdhA	NC_009439.1	2770422	2772194	R	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit	complement(2770422..2772194)	Pseudomonas mendocina ymp	5107381
YP_001187994.1	CDS	Pmen_2506	NC_009439.1	2772198	2772566	R	succinate dehydrogenase subunit D	complement(2772198..2772566)	Pseudomonas mendocina ymp	5107382
YP_001187995.1	CDS	Pmen_2507	NC_009439.1	2772560	2772946	R	PFAM: succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase subunit C	complement(2772560..2772946)	Pseudomonas mendocina ymp	5107383
YP_001187996.1	CDS	gltA	NC_009439.1	2773266	2774576	D	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase	2773266..2774576	Pseudomonas mendocina ymp	5107384
YP_001187997.1	CDS	Pmen_2509	NC_009439.1	2774659	2775264	R	PFAM: lipid-binding START domain protein; lipid-binding START domain-containing protein	complement(2774659..2775264)	Pseudomonas mendocina ymp	5107385
YP_001187998.1	CDS	Pmen_2510	NC_009439.1	2775326	2775577	R	PFAM: protein of unknown function UPF0153; hypothetical protein	complement(2775326..2775577)	Pseudomonas mendocina ymp	5107386
YP_001187999.1	CDS	Pmen_2511	NC_009439.1	2775651	2776523	R	PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-binding 6-phosphogluconate dehydrogenase	complement(2775651..2776523)	Pseudomonas mendocina ymp	5107978
YP_001188000.1	CDS	Pmen_2512	NC_009439.1	2776756	2777304	D	PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; exonuclease	2776756..2777304	Pseudomonas mendocina ymp	5107979
YP_001188001.1	CDS	Pmen_2513	NC_009439.1	2777370	2777651	D	PFAM: protein of unknown function DUF1255; hypothetical protein	2777370..2777651	Pseudomonas mendocina ymp	5107980
YP_001188002.1	CDS	Pmen_2514	NC_009439.1	2777723	2778574	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	2777723..2778574	Pseudomonas mendocina ymp	5107981
YP_001188003.1	CDS	Pmen_2515	NC_009439.1	2778571	2780334	R	TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein	complement(2778571..2780334)	Pseudomonas mendocina ymp	5107982
YP_001188004.1	CDS	Pmen_2516	NC_009439.1	2780343	2780750	R	PFAM: DoxX family protein; DoxX family protein	complement(2780343..2780750)	Pseudomonas mendocina ymp	5107983
YP_001188005.1	CDS	Pmen_2517	NC_009439.1	2780743	2781177	R	PFAM: putative thiol-disulphide oxidoreductase DCC; putative thiol-disulfide oxidoreductase DCC	complement(2780743..2781177)	Pseudomonas mendocina ymp	5107984
YP_001188006.1	CDS	Pmen_2518	NC_009439.1	2781174	2781764	R	PFAM: protein of unknown function DUF1287; hypothetical protein	complement(2781174..2781764)	Pseudomonas mendocina ymp	5107985
YP_001188007.1	CDS	Pmen_2519	NC_009439.1	2781774	2782889	R	PFAM: ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase	complement(2781774..2782889)	Pseudomonas mendocina ymp	5107986
YP_001188008.1	CDS	Pmen_2520	NC_009439.1	2783196	2783375	D	hypothetical protein	2783196..2783375	Pseudomonas mendocina ymp	5107987
YP_001188009.1	CDS	Pmen_2521	NC_009439.1	2783417	2783812	R	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B	complement(2783417..2783812)	Pseudomonas mendocina ymp	5107988
YP_001188010.1	CDS	Pmen_2522	NC_009439.1	2784103	2785314	D	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT	2784103..2785314	Pseudomonas mendocina ymp	5107989
YP_001188011.1	CDS	Pmen_2523	NC_009439.1	2785321	2785773	D	hypothetical protein	2785321..2785773	Pseudomonas mendocina ymp	5107990
YP_001188012.1	CDS	Pmen_2524	NC_009439.1	2785862	2786734	D	putative metalloprotease; heat shock protein HtpX	2785862..2786734	Pseudomonas mendocina ymp	5107991
YP_001188013.1	CDS	Pmen_2525	NC_009439.1	2786863	2787522	R	PFAM: thiopurine S-methyltransferase; thiopurine S-methyltransferase	complement(2786863..2787522)	Pseudomonas mendocina ymp	5107992
YP_001188014.1	CDS	Pmen_2526	NC_009439.1	2787626	2788393	D	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; extradiol ring-cleavage dioxygenase III subunit B	2787626..2788393	Pseudomonas mendocina ymp	5107993
YP_001188015.1	CDS	Pmen_2527	NC_009439.1	2788390	2788974	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(2788390..2788974)	Pseudomonas mendocina ymp	5107994
YP_001188016.1	CDS	Pmen_2528	NC_009439.1	2789079	2789516	D	hypothetical protein	2789079..2789516	Pseudomonas mendocina ymp	5107995
YP_001188017.1	CDS	Pmen_2529	NC_009439.1	2789550	2790539	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	complement(2789550..2790539)	Pseudomonas mendocina ymp	5107996
YP_001188018.1	CDS	Pmen_2530	NC_009439.1	2790632	2791651	R	SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease	complement(2790632..2791651)	Pseudomonas mendocina ymp	5107997
YP_001188019.1	CDS	Pmen_2531	NC_009439.1	2791850	2792548	D	PFAM: Phosphoglycerate mutase; phosphoglycerate mutase	2791850..2792548	Pseudomonas mendocina ymp	5107998
YP_001188020.1	CDS	Pmen_2532	NC_009439.1	2792607	2792918	D	PFAM: Sterol-binding domain protein; sterol-binding domain-containing protein	2792607..2792918	Pseudomonas mendocina ymp	5107999
YP_001188021.1	CDS	Pmen_2533	NC_009439.1	2793010	2794152	R	hypothetical protein	complement(2793010..2794152)	Pseudomonas mendocina ymp	5108000
YP_001188022.1	CDS	Pmen_2534	NC_009439.1	2794157	2795746	R	PFAM: membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein	complement(2794157..2795746)	Pseudomonas mendocina ymp	5108001
YP_001188023.1	CDS	Pmen_2535	NC_009439.1	2795765	2796766	R	hypothetical protein	complement(2795765..2796766)	Pseudomonas mendocina ymp	5108002
YP_001188024.1	CDS	Pmen_2536	NC_009439.1	2796805	2797566	R	PFAM: peptidase C39, bacteriocin processing; peptidase C39, bacteriocin processing	complement(2796805..2797566)	Pseudomonas mendocina ymp	5108003
YP_001188025.1	CDS	Pmen_2537	NC_009439.1	2797651	2798073	R	hypothetical protein	complement(2797651..2798073)	Pseudomonas mendocina ymp	5108004
YP_001188026.1	CDS	Pmen_2538	NC_009439.1	2798314	2801037	R	PFAM: regulatory protein, LuxR; regulatory protein LuxR	complement(2798314..2801037)	Pseudomonas mendocina ymp	5108005
YP_001188027.1	CDS	Pmen_2539	NC_009439.1	2801034	2803748	R	PFAM: regulatory protein, LuxR; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; regulatory protein LuxR	complement(2801034..2803748)	Pseudomonas mendocina ymp	5108006
YP_001188028.1	CDS	Pmen_2540	NC_009439.1	2803864	2805264	D	TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; aminodeoxychorismate synthase subunit I	2803864..2805264	Pseudomonas mendocina ymp	5108007
YP_001188029.1	CDS	Pmen_2541	NC_009439.1	2805332	2806495	R	PFAM: fatty acid desaturase; fatty acid desaturase	complement(2805332..2806495)	Pseudomonas mendocina ymp	5108008
YP_001188030.1	CDS	Pmen_2542	NC_009439.1	2806535	2807569	R	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit	complement(2806535..2807569)	Pseudomonas mendocina ymp	5108009
YP_001188031.1	CDS	Pmen_2543	NC_009439.1	2807720	2808730	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	2807720..2808730	Pseudomonas mendocina ymp	5108010
YP_001188032.1	CDS	thrH	NC_009439.1	2808796	2809413	R	catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; phosphoserine phosphatase	complement(2808796..2809413)	Pseudomonas mendocina ymp	5108011
YP_001188033.1	CDS	Pmen_2545	NC_009439.1	2809590	2810210	D	PFAM: phosphoadenosine phosphosulfate reductase; phosphoadenylylsulfate reductase	2809590..2810210	Pseudomonas mendocina ymp	5108012
YP_001188034.1	CDS	cysB	NC_009439.1	2810274	2811248	R	LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB	complement(2810274..2811248)	Pseudomonas mendocina ymp	5108013
YP_001188035.1	CDS	Pmen_2547	NC_009439.1	2811354	2811854	R	PFAM: UspA domain protein; UspA domain-containing protein	complement(2811354..2811854)	Pseudomonas mendocina ymp	5108014
YP_001188036.1	CDS	Pmen_2548	NC_009439.1	2812035	2812940	R	PFAM: 5-nucleotidase; 5'-nucleotidase	complement(2812035..2812940)	Pseudomonas mendocina ymp	5108015
YP_001188037.1	CDS	Pmen_2549	NC_009439.1	2812943	2813896	R	catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase	complement(2812943..2813896)	Pseudomonas mendocina ymp	5108016
YP_001188038.1	CDS	Pmen_2550	NC_009439.1	2813896	2814222	R	hypothetical protein	complement(2813896..2814222)	Pseudomonas mendocina ymp	5108017
YP_001188039.1	CDS	Pmen_2551	NC_009439.1	2814281	2814694	D	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	2814281..2814694	Pseudomonas mendocina ymp	5108018
YP_001188040.1	CDS	Pmen_2552	NC_009439.1	2814844	2815932	D	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase	2814844..2815932	Pseudomonas mendocina ymp	5108019
YP_001188041.1	CDS	Pmen_2553	NC_009439.1	2816047	2816331	R	acetyltransferase-like protein	complement(2816047..2816331)	Pseudomonas mendocina ymp	5108020
YP_001188042.1	CDS	Pmen_2554	NC_009439.1	2816473	2817846	R	PFAM: Gluconate transporter; Citrate transporter; citrate transporter	complement(2816473..2817846)	Pseudomonas mendocina ymp	5108021
YP_001188043.1	CDS	Pmen_2555	NC_009439.1	2818126	2818377	D	hypothetical protein	2818126..2818377	Pseudomonas mendocina ymp	5108022
YP_001188044.1	CDS	Pmen_2556	NC_009439.1	2818529	2819485	R	PFAM: ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein	complement(2818529..2819485)	Pseudomonas mendocina ymp	5108023
YP_001188045.1	CDS	Pmen_2557	NC_009439.1	2819556	2819837	R	hypothetical protein	complement(2819556..2819837)	Pseudomonas mendocina ymp	5108024
YP_001188046.1	CDS	Pmen_2558	NC_009439.1	2819894	2820499	R	PFAM: lipolytic enzyme, G-D-S-L family; lysophospholipase	complement(2819894..2820499)	Pseudomonas mendocina ymp	5108025
YP_001188047.1	CDS	Pmen_2559	NC_009439.1	2820510	2821193	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	2820510..2821193	Pseudomonas mendocina ymp	5108026
YP_001188048.1	CDS	Pmen_2560	NC_009439.1	2821193	2823697	D	PFAM: protein of unknown function DUF214; hypothetical protein	2821193..2823697	Pseudomonas mendocina ymp	5108027
YP_001188049.1	CDS	greB	NC_009439.1	2823752	2824249	D	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB	2823752..2824249	Pseudomonas mendocina ymp	5108028
YP_001188050.1	CDS	Pmen_2562	NC_009439.1	2824350	2824658	R	hypothetical protein	complement(2824350..2824658)	Pseudomonas mendocina ymp	5108029
YP_001188051.1	CDS	Pmen_2563	NC_009439.1	2824851	2825396	D	TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; 2'-5' RNA ligase	2824851..2825396	Pseudomonas mendocina ymp	5108030
YP_001188052.1	CDS	Pmen_2564	NC_009439.1	2825589	2826542	D	PFAM: alpha/beta hydrolase fold; triacylglycerol lipase	2825589..2826542	Pseudomonas mendocina ymp	5108031
YP_001188053.1	CDS	Pmen_2565	NC_009439.1	2826660	2827679	D	acts as a molecular chaperone to fold and export lipase A; lipase chaperone	2826660..2827679	Pseudomonas mendocina ymp	5108032
YP_001188054.1	CDS	Pmen_2566	NC_009439.1	2827684	2828703	R	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator	complement(2827684..2828703)	Pseudomonas mendocina ymp	5108033
YP_001188055.1	CDS	Pmen_2567	NC_009439.1	2828827	2829840	R	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	complement(2828827..2829840)	Pseudomonas mendocina ymp	5108034
YP_001188056.1	CDS	Pmen_2568	NC_009439.1	2829898	2831175	R	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM	complement(2829898..2831175)	Pseudomonas mendocina ymp	5108035
YP_001188057.1	CDS	Pmen_2569	NC_009439.1	2831225	2832346	R	TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; Tripartite ATP-independent periplasmic transporter, DctQ component; carbohydrate kinase	complement(2831225..2832346)	Pseudomonas mendocina ymp	5108036
YP_001188058.1	CDS	Pmen_2570	NC_009439.1	2832542	2834626	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor	2832542..2834626	Pseudomonas mendocina ymp	5108037
YP_001188059.1	CDS	cysS	NC_009439.1	2834762	2836147	R	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase	complement(2834762..2836147)	Pseudomonas mendocina ymp	5108038
YP_001188060.1	CDS	Pmen_2572	NC_009439.1	2836148	2837815	R	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase	complement(2836148..2837815)	Pseudomonas mendocina ymp	5108039
YP_001188061.1	CDS	Pmen_2573	NC_009439.1	2837942	2838472	D	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase	2837942..2838472	Pseudomonas mendocina ymp	5108040
YP_001188062.1	CDS	Pmen_2574	NC_009439.1	2838477	2839205	D	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase	2838477..2839205	Pseudomonas mendocina ymp	5108041
YP_001188063.1	CDS	Pmen_2575	NC_009439.1	2839393	2840070	R	PFAM: tRNA--hydroxylase; tRNA--hydroxylase	complement(2839393..2840070)	Pseudomonas mendocina ymp	5108042
YP_001188064.1	CDS	Pmen_2576	NC_009439.1	2840228	2841091	D	PFAM: UspA domain protein; UspA domain-containing protein	2840228..2841091	Pseudomonas mendocina ymp	5108043
YP_001188065.1	CDS	Pmen_2577	NC_009439.1	2841150	2841626	R	PFAM: protein of unknown function DUF1289; hypothetical protein	complement(2841150..2841626)	Pseudomonas mendocina ymp	5108044
YP_001188066.2	CDS	Pmen_2578	NC_009439.1	2842030	2844630	D	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	2842030..2844630	Pseudomonas mendocina ymp	5108045
YP_001188067.1	CDS	Pmen_2579	NC_009439.1	2844776	2844985	D	PFAM: protein of unknown function DUF903; hypothetical protein	2844776..2844985	Pseudomonas mendocina ymp	5108046
YP_001188068.1	CDS	Pmen_2580	NC_009439.1	2845211	2846422	D	nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein	2845211..2846422	Pseudomonas mendocina ymp	5108047
YP_001188069.1	CDS	Pmen_2581	NC_009439.1	2846442	2847020	D	PFAM: response regulator receiver; ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein	2846442..2847020	Pseudomonas mendocina ymp	5108048
YP_001188070.1	CDS	Pmen_2582	NC_009439.1	2847259	2848371	D	hypothetical protein	2847259..2848371	Pseudomonas mendocina ymp	5108049
YP_001188071.1	CDS	Pmen_2583	NC_009439.1	2848525	2849754	D	PFAM: aminotransferase, class I and II; aminotransferase	2848525..2849754	Pseudomonas mendocina ymp	5108050
YP_001188072.1	CDS	Pmen_2584	NC_009439.1	2849916	2850638	D	TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase	2849916..2850638	Pseudomonas mendocina ymp	5108051
YP_001188073.1	CDS	Pmen_2585	NC_009439.1	2850784	2850978	D	hypothetical protein	2850784..2850978	Pseudomonas mendocina ymp	5108052
YP_001188074.1	CDS	Pmen_2586	NC_009439.1	2850987	2851229	D	hypothetical protein	2850987..2851229	Pseudomonas mendocina ymp	5108053
YP_001188075.1	CDS	Pmen_2587	NC_009439.1	2851272	2851997	R	PFAM: glutamine amidotransferase class-I; amidotransferase	complement(2851272..2851997)	Pseudomonas mendocina ymp	5108054
YP_001188076.1	CDS	Pmen_2588	NC_009439.1	2852429	2852629	D	hypothetical protein	2852429..2852629	Pseudomonas mendocina ymp	5108055
YP_001188077.1	CDS	Pmen_2589	NC_009439.1	2852684	2852950	D	hypothetical protein	2852684..2852950	Pseudomonas mendocina ymp	5107899
YP_001188078.1	CDS	Pmen_2590	NC_009439.1	2853047	2855191	R	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase	complement(2853047..2855191)	Pseudomonas mendocina ymp	5107900
YP_001188079.1	CDS	Pmen_2591	NC_009439.1	2855353	2856558	R	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	complement(2855353..2856558)	Pseudomonas mendocina ymp	5107901
YP_001188080.1	CDS	Pmen_2592	NC_009439.1	2857246	2857605	D	PFAM: Rhodanese domain protein; rhodanese domain-containing protein	2857246..2857605	Pseudomonas mendocina ymp	5107902
YP_001188081.1	CDS	Pmen_2593	NC_009439.1	2857602	2858411	D	hypothetical protein	2857602..2858411	Pseudomonas mendocina ymp	5107903
YP_001188082.1	CDS	Pmen_2594	NC_009439.1	2858490	2858879	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	complement(2858490..2858879)	Pseudomonas mendocina ymp	5107904
YP_001188083.1	CDS	Pmen_2595	NC_009439.1	2858991	2859788	R	PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; transglutaminase domain-containing protein	complement(2858991..2859788)	Pseudomonas mendocina ymp	5107905
YP_001188084.1	CDS	Pmen_2596	NC_009439.1	2859785	2860735	R	PFAM: protein of unknown function DUF403; hypothetical protein	complement(2859785..2860735)	Pseudomonas mendocina ymp	5107906
YP_001188085.1	CDS	Pmen_2597	NC_009439.1	2860739	2862148	R	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; hypothetical protein	complement(2860739..2862148)	Pseudomonas mendocina ymp	5107907
YP_001188086.1	CDS	Pmen_2598	NC_009439.1	2862541	2863215	R	alpha/beta-hydrolase fold-like hydrolase	complement(2862541..2863215)	Pseudomonas mendocina ymp	5107908
YP_001188087.1	CDS	Pmen_2599	NC_009439.1	2863317	2864756	D	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; cytochrome c oxidase, cbb3-type subunit I	2863317..2864756	Pseudomonas mendocina ymp	5107909
YP_001188088.1	CDS	Pmen_2600	NC_009439.1	2864756	2865364	D	CcoO; FixO; cbb3-type cytochrome c oxidase subunit II	2864756..2865364	Pseudomonas mendocina ymp	5107910
YP_001188089.1	CDS	Pmen_2601	NC_009439.1	2865370	2865549	D	PFAM: Cbb3-type cytochrome oxidase component; cbb3-type cytochrome oxidase subunit	2865370..2865549	Pseudomonas mendocina ymp	5107911
YP_001188090.1	CDS	Pmen_2602	NC_009439.1	2865546	2866472	D	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; cytochrome c oxidase, cbb3-type subunit III	2865546..2866472	Pseudomonas mendocina ymp	5107912
YP_001188091.1	CDS	Pmen_2603	NC_009439.1	2866523	2866801	D	hypothetical protein	2866523..2866801	Pseudomonas mendocina ymp	5107913
YP_001188092.1	CDS	Pmen_2604	NC_009439.1	2866818	2868260	D	CcoN; FixN; cbb3-type cytochrome c oxidase subunit I	2866818..2868260	Pseudomonas mendocina ymp	5107914
YP_001188093.1	CDS	Pmen_2605	NC_009439.1	2868260	2868868	D	CcoO; FixO; cbb3-type cytochrome c oxidase subunit II	2868260..2868868	Pseudomonas mendocina ymp	5107915
YP_001188094.1	CDS	Pmen_2606	NC_009439.1	2868875	2869069	D	PFAM: Cbb3-type cytochrome oxidase component; cbb3-type cytochrome oxidase subunit	2868875..2869069	Pseudomonas mendocina ymp	5107916
YP_001188095.1	CDS	Pmen_2607	NC_009439.1	2869066	2870064	D	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; cytochrome c oxidase, cbb3-type subunit III	2869066..2870064	Pseudomonas mendocina ymp	5107917
YP_001188096.1	CDS	Pmen_2608	NC_009439.1	2870220	2871632	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin	2870220..2871632	Pseudomonas mendocina ymp	5107918
YP_001188097.1	CDS	Pmen_2609	NC_009439.1	2871646	2872164	D	hypothetical protein	2871646..2872164	Pseudomonas mendocina ymp	5107919
YP_001188098.1	CDS	Pmen_2610	NC_009439.1	2872173	2874581	D	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase	2872173..2874581	Pseudomonas mendocina ymp	5107920
YP_001188099.1	CDS	Pmen_2611	NC_009439.1	2874602	2874808	D	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; cbb3-type cytochrome oxidase maturation protein	2874602..2874808	Pseudomonas mendocina ymp	5107921
YP_001188100.1	CDS	Pmen_2612	NC_009439.1	2874801	2875484	D	hypothetical protein	2874801..2875484	Pseudomonas mendocina ymp	5107922
YP_001188101.1	CDS	Pmen_2613	NC_009439.1	2875652	2877034	D	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase	2875652..2877034	Pseudomonas mendocina ymp	5107923
YP_001188102.1	CDS	Pmen_2614	NC_009439.1	2877062	2877505	R	hypothetical protein	complement(2877062..2877505)	Pseudomonas mendocina ymp	5107924
YP_001188103.1	CDS	Pmen_2615	NC_009439.1	2877658	2878392	D	PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator	2877658..2878392	Pseudomonas mendocina ymp	5107925
YP_001188104.1	CDS	Pmen_2616	NC_009439.1	2878437	2878985	D	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase	2878437..2878985	Pseudomonas mendocina ymp	5107926
YP_001188105.1	CDS	Pmen_2617	NC_009439.1	2879079	2879897	D	PFAM: Ion transport protein; Ion transport protein	2879079..2879897	Pseudomonas mendocina ymp	5107927
YP_001188106.1	CDS	Pmen_2618	NC_009439.1	2880122	2880958	D	metal-dependent hydrolase-like protein	2880122..2880958	Pseudomonas mendocina ymp	5107928
YP_001188107.1	CDS	Pmen_2619	NC_009439.1	2881069	2881776	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(2881069..2881776)	Pseudomonas mendocina ymp	5107929
YP_001188108.1	CDS	Pmen_2620	NC_009439.1	2881893	2883446	D	cyclohexanone monooxygenase	2881893..2883446	Pseudomonas mendocina ymp	5107930
YP_001188109.1	CDS	Pmen_2621	NC_009439.1	2883443	2884330	D	PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	2883443..2884330	Pseudomonas mendocina ymp	5107931
YP_001188110.1	CDS	Pmen_2622	NC_009439.1	2884529	2884777	D	hypothetical protein	2884529..2884777	Pseudomonas mendocina ymp	5107932
YP_001188111.1	CDS	Pmen_2623	NC_009439.1	2884915	2885130	R	hypothetical protein	complement(2884915..2885130)	Pseudomonas mendocina ymp	5107933
YP_001188112.1	CDS	Pmen_2624	NC_009439.1	2885177	2885770	R	PFAM: DSBA oxidoreductase; DSBA oxidoreductase	complement(2885177..2885770)	Pseudomonas mendocina ymp	5107934
YP_001188113.1	CDS	Pmen_2625	NC_009439.1	2885814	2886545	R	PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR	complement(2885814..2886545)	Pseudomonas mendocina ymp	5107935
YP_001188114.1	CDS	Pmen_2626	NC_009439.1	2886636	2887202	D	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	2886636..2887202	Pseudomonas mendocina ymp	5107936
YP_001188115.1	CDS	Pmen_2627	NC_009439.1	2887251	2887901	D	PFAM: protein of unknown function DUF480; hypothetical protein	2887251..2887901	Pseudomonas mendocina ymp	5107937
YP_001188116.1	CDS	Pmen_2628	NC_009439.1	2887901	2888248	D	hypothetical protein	2887901..2888248	Pseudomonas mendocina ymp	5107938
YP_001188117.1	CDS	Pmen_2629	NC_009439.1	2888315	2888797	D	PFAM: regulatory protein, MarR; MarR family transcriptional regulator	2888315..2888797	Pseudomonas mendocina ymp	5107939
YP_001188118.1	CDS	Pmen_2630	NC_009439.1	2889175	2889600	D	PFAM: OsmC family protein; OsmC family protein	2889175..2889600	Pseudomonas mendocina ymp	5107940
YP_001188119.1	CDS	Pmen_2631	NC_009439.1	2889658	2889918	D	hypothetical protein	2889658..2889918	Pseudomonas mendocina ymp	5107941
YP_001188120.1	CDS	Pmen_2632	NC_009439.1	2889952	2890968	D	PFAM: Alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein	2889952..2890968	Pseudomonas mendocina ymp	5107942
YP_001188121.1	CDS	Pmen_2633	NC_009439.1	2891056	2892423	R	PFAM: aminotransferase class-III; putative aminotransferase	complement(2891056..2892423)	Pseudomonas mendocina ymp	5107943
YP_001188122.1	CDS	Pmen_2634	NC_009439.1	2892447	2893793	R	PFAM: glutamine synthetase, catalytic region; glutamate--putrescine ligase	complement(2892447..2893793)	Pseudomonas mendocina ymp	5107944
YP_001188123.1	CDS	Pmen_2635	NC_009439.1	2893822	2894379	R	PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; XRE family transcriptional regulator	complement(2893822..2894379)	Pseudomonas mendocina ymp	5107945
YP_001188124.1	CDS	Pmen_2636	NC_009439.1	2894398	2895687	R	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	complement(2894398..2895687)	Pseudomonas mendocina ymp	5107946
YP_001188125.1	CDS	Pmen_2637	NC_009439.1	2895802	2896101	R	PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase	complement(2895802..2896101)	Pseudomonas mendocina ymp	5107947
YP_001188126.1	CDS	Pmen_2638	NC_009439.1	2896595	2897542	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; AraC family transcriptional regulator	2896595..2897542	Pseudomonas mendocina ymp	5107948
YP_001188127.1	CDS	Pmen_2640	NC_009439.1	2897736	2898884	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	complement(2897736..2898884)	Pseudomonas mendocina ymp	5107265
YP_001188128.1	CDS	ftrA	NC_009439.1	2898961	2899929	R	upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; transcriptional activator FtrA	complement(2898961..2899929)	Pseudomonas mendocina ymp	5107950
YP_001188129.1	CDS	Pmen_2642	NC_009439.1	2900027	2900464	D	PFAM: Rhodanese domain protein; rhodanese domain-containing protein	2900027..2900464	Pseudomonas mendocina ymp	5107951
YP_001188130.1	CDS	Pmen_2643	NC_009439.1	2900458	2900979	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	2900458..2900979	Pseudomonas mendocina ymp	5107952
YP_001188131.1	CDS	Pmen_2644	NC_009439.1	2900960	2901529	R	hypothetical protein	complement(2900960..2901529)	Pseudomonas mendocina ymp	5107953
YP_001188132.1	CDS	recR	NC_009439.1	2901560	2902159	R	involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR	complement(2901560..2902159)	Pseudomonas mendocina ymp	5107954
YP_001188133.1	CDS	Pmen_2646	NC_009439.1	2902414	2902740	R	PFAM: conserved hypothetical protein 103; hypothetical protein	complement(2902414..2902740)	Pseudomonas mendocina ymp	5107955
YP_001188134.1	CDS	Pmen_2647	NC_009439.1	2902767	2904845	R	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau	complement(2902767..2904845)	Pseudomonas mendocina ymp	5107956
YP_001188135.1	CDS	Pmen_2648	NC_009439.1	2905303	2905524	D	hypothetical protein	2905303..2905524	Pseudomonas mendocina ymp	5107957
YP_001188136.1	CDS	Pmen_2649	NC_009439.1	2905578	2905865	D	hypothetical protein	2905578..2905865	Pseudomonas mendocina ymp	5107958
YP_001188137.1	CDS	Pmen_2650	NC_009439.1	2906196	2907902	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(2906196..2907902)	Pseudomonas mendocina ymp	5107266
YP_001188138.1	CDS	Pmen_2651	NC_009439.1	2908163	2908441	D	PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein	2908163..2908441	Pseudomonas mendocina ymp	5107960
YP_001188139.1	CDS	Pmen_2652	NC_009439.1	2908593	2909825	D	PFAM: Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Sel1 domain-containing protein	2908593..2909825	Pseudomonas mendocina ymp	5107961
YP_001188140.1	CDS	Pmen_2653	NC_009439.1	2909825	2912137	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase	2909825..2912137	Pseudomonas mendocina ymp	5107962
YP_001188141.1	CDS	Pmen_2654	NC_009439.1	2912150	2912446	R	hypothetical protein	complement(2912150..2912446)	Pseudomonas mendocina ymp	5107963
YP_001188142.1	CDS	Pmen_2655	NC_009439.1	2912466	2912960	R	PFAM: blue (type 1) copper domain protein; blue (type1) copper domain-containing protein	complement(2912466..2912960)	Pseudomonas mendocina ymp	5107964
YP_001188143.1	CDS	Pmen_2656	NC_009439.1	2913012	2914424	R	PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; multicopper oxidase, type 3	complement(2913012..2914424)	Pseudomonas mendocina ymp	5107965
YP_001188144.1	CDS	Pmen_2657	NC_009439.1	2914441	2915841	R	PFAM: outer membrane efflux protein; outer membrane efflux protein	complement(2914441..2915841)	Pseudomonas mendocina ymp	5107966
YP_001188145.1	CDS	Pmen_2658	NC_009439.1	2915828	2916127	R	hypothetical protein	complement(2915828..2916127)	Pseudomonas mendocina ymp	5107967
YP_001188146.1	CDS	Pmen_2659	NC_009439.1	2916202	2916606	R	hypothetical protein	complement(2916202..2916606)	Pseudomonas mendocina ymp	5107968
YP_001188147.1	CDS	Pmen_2660	NC_009439.1	2916676	2918103	R	TIGRFAM: arginine/ornithine antiporter; PFAM: Spore germination protein; amino acid permease-associated region; arginine/ornithine antiporter	complement(2916676..2918103)	Pseudomonas mendocina ymp	5107969
YP_001188148.1	CDS	Pmen_2661	NC_009439.1	2918267	2919244	D	PFAM: Alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein	2918267..2919244	Pseudomonas mendocina ymp	5107970
YP_001188149.1	CDS	Pmen_2662	NC_009439.1	2919383	2920069	D	PFAM: isochorismatase hydrolase; isochorismatase hydrolase	2919383..2920069	Pseudomonas mendocina ymp	5107971
YP_001188150.1	CDS	Pmen_2663	NC_009439.1	2920074	2920745	D	hypothetical protein	2920074..2920745	Pseudomonas mendocina ymp	5107972
YP_001188151.1	CDS	Pmen_2664	NC_009439.1	2920742	2922724	D	PFAM: Amidohydrolase 3; amidohydrolase 3	2920742..2922724	Pseudomonas mendocina ymp	5107973
YP_001188152.1	CDS	Pmen_2665	NC_009439.1	2922726	2924354	D	PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; hypothetical protein	2922726..2924354	Pseudomonas mendocina ymp	5107974
YP_001188153.1	CDS	Pmen_2666	NC_009439.1	2924385	2925155	D	hypothetical protein	2924385..2925155	Pseudomonas mendocina ymp	5107975
YP_001188154.1	CDS	Pmen_2667	NC_009439.1	2925142	2928195	D	PFAM: ATP-binding region, ATPase domain protein domain protein; Two component regulator propeller; Two component regulator three Y domain protein; histidine kinase, dimerisation and phosphoacceptor region; histidine kinase	2925142..2928195	Pseudomonas mendocina ymp	5107976
YP_001188155.1	CDS	Pmen_2668	NC_009439.1	2928192	2928833	D	PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator	2928192..2928833	Pseudomonas mendocina ymp	5107977
YP_001188156.1	CDS	Pmen_2669	NC_009439.1	2928920	2929486	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	2928920..2929486	Pseudomonas mendocina ymp	5107820
YP_001188157.1	CDS	Pmen_2670	NC_009439.1	2929487	2930089	R	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase domain-containing protein	complement(2929487..2930089)	Pseudomonas mendocina ymp	5107821
YP_001188158.1	CDS	Pmen_2671	NC_009439.1	2930195	2931352	R	PFAM: aminotransferase, class I and II; GntR family transcriptional regulator	complement(2930195..2931352)	Pseudomonas mendocina ymp	5107822
YP_001188159.1	CDS	Pmen_2672	NC_009439.1	2931520	2931957	D	PFAM: regulatory protein, MarR; MarR family transcriptional regulator	2931520..2931957	Pseudomonas mendocina ymp	5107823
YP_001188160.1	CDS	Pmen_2673	NC_009439.1	2932147	2932671	D	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in P. aeruginosa this sigma factor regulates the production of the ferrichrome outer membrane receptor FiuA.; RNA polymerase sigma factor	2932147..2932671	Pseudomonas mendocina ymp	5107824
YP_001188161.1	CDS	Pmen_2674	NC_009439.1	2932668	2933624	D	PFAM: FecR protein; putative FecR protein	2932668..2933624	Pseudomonas mendocina ymp	5107825
YP_001188162.1	CDS	Pmen_2675	NC_009439.1	2933703	2936111	D	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; TonB-dependent siderophore receptor	2933703..2936111	Pseudomonas mendocina ymp	5107826
YP_001188163.1	CDS	Pmen_2676	NC_009439.1	2936329	2936976	R	hypothetical protein	complement(2936329..2936976)	Pseudomonas mendocina ymp	5107827
YP_001188164.1	CDS	Pmen_2677	NC_009439.1	2937121	2937732	D	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	2937121..2937732	Pseudomonas mendocina ymp	5107828
YP_001188165.1	CDS	Pmen_2678	NC_009439.1	2937732	2938922	D	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; benzoate transporter	2937732..2938922	Pseudomonas mendocina ymp	5107829
YP_001188166.1	CDS	Pmen_2679	NC_009439.1	2939018	2939911	R	PFAM: Bile acid:sodium symporter; bile acid:sodium symporter	complement(2939018..2939911)	Pseudomonas mendocina ymp	5107830
YP_001188167.1	CDS	Pmen_2680	NC_009439.1	2940021	2940782	R	PFAM: short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase	complement(2940021..2940782)	Pseudomonas mendocina ymp	5107831
YP_001188168.1	CDS	Pmen_2681	NC_009439.1	2940998	2941735	R	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase	complement(2940998..2941735)	Pseudomonas mendocina ymp	5107832
YP_001188169.1	CDS	Pmen_2682	NC_009439.1	2941924	2943318	D	PFAM: Ethanolamine ammonia lyase large subunit; ethanolamine ammonia lyase large subunit	2941924..2943318	Pseudomonas mendocina ymp	5107833
YP_001188170.1	CDS	Pmen_2683	NC_009439.1	2943318	2944082	D	PFAM: Ethanolamine ammonia-lyase light chain; ethanolamine ammonia-lyase light chain	2943318..2944082	Pseudomonas mendocina ymp	5107834
YP_001188171.1	CDS	Pmen_2684	NC_009439.1	2944137	2944310	D	hypothetical protein	2944137..2944310	Pseudomonas mendocina ymp	5107835
YP_001188172.1	CDS	Pmen_2685	NC_009439.1	2944392	2945150	D	PFAM: Abortive infection protein; abortive infection protein	2944392..2945150	Pseudomonas mendocina ymp	5107836
YP_001188173.1	CDS	Pmen_2686	NC_009439.1	2945101	2945892	R	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(2945101..2945892)	Pseudomonas mendocina ymp	5107837
YP_001188174.1	CDS	Pmen_2687	NC_009439.1	2945994	2946779	R	hypothetical protein	complement(2945994..2946779)	Pseudomonas mendocina ymp	5107838
YP_001188175.1	CDS	Pmen_2688	NC_009439.1	2946879	2947502	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(2946879..2947502)	Pseudomonas mendocina ymp	5107839
YP_001188176.1	CDS	Pmen_2689	NC_009439.1	2947703	2949541	D	PFAM: protein of unknown function DUF1446; hypothetical protein	2947703..2949541	Pseudomonas mendocina ymp	5107840
YP_001188177.1	CDS	Pmen_2690	NC_009439.1	2949584	2950453	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	2949584..2950453	Pseudomonas mendocina ymp	5107841
YP_001188178.1	CDS	Pmen_2691	NC_009439.1	2950458	2952074	D	PFAM: carboxyl transferase; propionyl-CoA carboxylase	2950458..2952074	Pseudomonas mendocina ymp	5107842
YP_001188179.1	CDS	Pmen_2692	NC_009439.1	2952124	2953284	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	2952124..2953284	Pseudomonas mendocina ymp	5107843
YP_001188180.1	CDS	Pmen_2693	NC_009439.1	2953358	2954155	D	PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase	2953358..2954155	Pseudomonas mendocina ymp	5107844
YP_001188181.1	CDS	Pmen_2694	NC_009439.1	2954349	2956334	D	PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; carbamoyl-phosphate synthase subunit L	2954349..2956334	Pseudomonas mendocina ymp	5107845
YP_001188182.1	CDS	Pmen_2695	NC_009439.1	2956414	2957238	D	PFAM: short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase	2956414..2957238	Pseudomonas mendocina ymp	5107846
YP_001188183.1	CDS	Pmen_2696	NC_009439.1	2957525	2959351	D	activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase	2957525..2959351	Pseudomonas mendocina ymp	5107847
YP_001188184.1	CDS	Pmen_2697	NC_009439.1	2959353	2959868	R	hypothetical protein	complement(2959353..2959868)	Pseudomonas mendocina ymp	5107848
YP_001188185.1	CDS	Pmen_2698	NC_009439.1	2959949	2960638	R	hypothetical protein	complement(2959949..2960638)	Pseudomonas mendocina ymp	5107849
YP_001188186.1	CDS	Pmen_2699	NC_009439.1	2960635	2961207	R	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor	complement(2960635..2961207)	Pseudomonas mendocina ymp	5107850
YP_001188187.1	CDS	Pmen_2700	NC_009439.1	2961204	2962904	R	PFAM: von Willebrand factor, type A; von Willebrand factor type A domain-containing protein	complement(2961204..2962904)	Pseudomonas mendocina ymp	5107851
YP_001188188.1	CDS	Pmen_2701	NC_009439.1	2962991	2964499	R	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator	complement(2962991..2964499)	Pseudomonas mendocina ymp	5107852
YP_001188189.1	CDS	Pmen_2702	NC_009439.1	2964621	2965433	R	PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein	complement(2964621..2965433)	Pseudomonas mendocina ymp	5107853
YP_001188190.1	CDS	Pmen_2703	NC_009439.1	2965433	2965783	R	hypothetical protein	complement(2965433..2965783)	Pseudomonas mendocina ymp	5107854
YP_001188191.1	CDS	Pmen_2704	NC_009439.1	2965793	2966626	R	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(2965793..2966626)	Pseudomonas mendocina ymp	5107855
YP_001188192.1	CDS	Pmen_2705	NC_009439.1	2966742	2967671	D	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	2966742..2967671	Pseudomonas mendocina ymp	5107856
YP_001188193.1	CDS	Pmen_2706	NC_009439.1	2967765	2968694	R	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha	complement(2967765..2968694)	Pseudomonas mendocina ymp	5107857
YP_001188194.1	CDS	Pmen_2707	NC_009439.1	2968695	2969444	R	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta	complement(2968695..2969444)	Pseudomonas mendocina ymp	5107858
YP_001188195.1	CDS	Pmen_2708	NC_009439.1	2969769	2971433	D	PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; electron-transferring-flavoprotein dehydrogenase	2969769..2971433	Pseudomonas mendocina ymp	5107859
YP_001188196.1	CDS	Pmen_2709	NC_009439.1	2971561	2972337	R	PFAM: short-chain dehydrogenase/reductase SDR; oxidoreductase	complement(2971561..2972337)	Pseudomonas mendocina ymp	5107860
YP_001188197.1	CDS	Pmen_2710	NC_009439.1	2972340	2973551	R	catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase	complement(2972340..2973551)	Pseudomonas mendocina ymp	5107861
YP_001188198.1	CDS	Pmen_2711	NC_009439.1	2973691	2975199	R	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase	complement(2973691..2975199)	Pseudomonas mendocina ymp	5107862
YP_001188199.1	CDS	Pmen_2712	NC_009439.1	2975289	2975801	R	PFAM: Colicin V production protein; colicin V production protein	complement(2975289..2975801)	Pseudomonas mendocina ymp	5107863
YP_001188200.1	CDS	Pmen_2713	NC_009439.1	2976159	2976773	R	PFAM: Sporulation domain protein; sporulation domain-containing protein	complement(2976159..2976773)	Pseudomonas mendocina ymp	5107864
YP_001188201.1	CDS	Pmen_2714	NC_009439.1	2976789	2978066	R	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase	complement(2976789..2978066)	Pseudomonas mendocina ymp	5107865
YP_001188202.1	CDS	Pmen_2715	NC_009439.1	2978063	2978947	R	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta	complement(2978063..2978947)	Pseudomonas mendocina ymp	5107866
YP_001188203.1	CDS	Pmen_2716	NC_009439.1	2979064	2979717	R	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase	complement(2979064..2979717)	Pseudomonas mendocina ymp	5107867
YP_001188204.1	CDS	truA	NC_009439.1	2979742	2980605	R	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A	complement(2979742..2980605)	Pseudomonas mendocina ymp	5107868
YP_001188205.1	CDS	Pmen_2718	NC_009439.1	2980614	2983409	R	Tfp pilus assembly protein FimV-like protein	complement(2980614..2983409)	Pseudomonas mendocina ymp	5107869
YP_001188206.1	CDS	Pmen_2719	NC_009439.1	2983565	2984575	R	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase	complement(2983565..2984575)	Pseudomonas mendocina ymp	5107870
YP_001188207.1	CDS	Pmen_2720	NC_009439.1	2984716	2985828	R	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase	complement(2984716..2985828)	Pseudomonas mendocina ymp	5107871
YP_001188208.1	CDS	Pmen_2721	NC_009439.1	2985886	2986968	R	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase	complement(2985886..2986968)	Pseudomonas mendocina ymp	5107872
YP_001188209.1	CDS	leuD	NC_009439.1	2987056	2987703	R	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit	complement(2987056..2987703)	Pseudomonas mendocina ymp	5107873
YP_001188210.1	CDS	Pmen_2723	NC_009439.1	2987715	2989142	R	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit	complement(2987715..2989142)	Pseudomonas mendocina ymp	5107874
YP_001188211.1	CDS	Pmen_2724	NC_009439.1	2989421	2990302	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	2989421..2990302	Pseudomonas mendocina ymp	5107875
YP_001188212.1	CDS	Pmen_2725	NC_009439.1	2990402	2992555	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase	2990402..2992555	Pseudomonas mendocina ymp	5107876
YP_001188213.1	CDS	Pmen_2726	NC_009439.1	2992647	2993129	R	PFAM: heat shock protein Hsp20; heat shock protein Hsp20	complement(2992647..2993129)	Pseudomonas mendocina ymp	5107877
YP_001188214.1	CDS	Pmen_2727	NC_009439.1	2993310	2994266	R	PFAM: dihydrouridine synthase, DuS; dihydrouridine synthase, DuS	complement(2993310..2994266)	Pseudomonas mendocina ymp	5107878
YP_001188215.1	CDS	Pmen_2728	NC_009439.1	2994361	2994756	D	hypothetical protein	2994361..2994756	Pseudomonas mendocina ymp	5107879
YP_001188216.1	CDS	Pmen_2729	NC_009439.1	2994763	2995212	R	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	complement(2994763..2995212)	Pseudomonas mendocina ymp	5107880
YP_001188217.1	CDS	Pmen_2730	NC_009439.1	2995358	2997274	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; diguanylate cyclase	2995358..2997274	Pseudomonas mendocina ymp	5107881
YP_001188218.1	CDS	Pmen_2731	NC_009439.1	2997244	2998083	R	hypothetical protein	complement(2997244..2998083)	Pseudomonas mendocina ymp	5107882
YP_001188219.1	CDS	Pmen_2732	NC_009439.1	2998105	2998644	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(2998105..2998644)	Pseudomonas mendocina ymp	5107883
YP_001188220.1	CDS	gltX	NC_009439.1	2999714	3001195	R	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase	complement(2999714..3001195)	Pseudomonas mendocina ymp	5107272
YP_001188221.1	CDS	Pmen_2734	NC_009439.1	3001230	3002150	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(3001230..3002150)	Pseudomonas mendocina ymp	5107885
YP_001188222.1	CDS	Pmen_2735	NC_009439.1	3002259	3003308	D	PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein	3002259..3003308	Pseudomonas mendocina ymp	5107886
YP_001188223.1	CDS	Pmen_2736	NC_009439.1	3003298	3004851	D	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter	3003298..3004851	Pseudomonas mendocina ymp	5107887
YP_001188224.1	CDS	Pmen_2737	NC_009439.1	3004948	3006963	R	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B	complement(3004948..3006963)	Pseudomonas mendocina ymp	5107888
YP_001188225.1	CDS	Pmen_2738	NC_009439.1	3007212	3008408	D	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase	3007212..3008408	Pseudomonas mendocina ymp	5107889
YP_001188226.1	CDS	Pmen_2739	NC_009439.1	3008559	3009479	R	involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase	complement(3008559..3009479)	Pseudomonas mendocina ymp	5107890
YP_001188227.1	CDS	Pmen_2740	NC_009439.1	3009654	3010946	D	PFAM: Citrate transporter; citrate transporter	3009654..3010946	Pseudomonas mendocina ymp	5107891
YP_001188228.1	CDS	Pmen_2741	NC_009439.1	3011285	3011881	D	PFAM: isochorismatase hydrolase; isochorismatase hydrolase	3011285..3011881	Pseudomonas mendocina ymp	5107892
YP_001188229.1	CDS	Pmen_2742	NC_009439.1	3011962	3012282	D	hypothetical protein	3011962..3012282	Pseudomonas mendocina ymp	5107893
YP_001188230.1	CDS	Pmen_2743	NC_009439.1	3012392	3012949	D	PFAM: Smr protein/MutS2; Smr protein/MutS2	3012392..3012949	Pseudomonas mendocina ymp	5107894
YP_001188231.1	CDS	folE	NC_009439.1	3013035	3013580	D	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I	3013035..3013580	Pseudomonas mendocina ymp	5107895
YP_001188232.1	CDS	Pmen_2745	NC_009439.1	3013645	3014013	D	PFAM: glutaredoxin; Glutathione S-transferase, N-terminal domain; glutaredoxin	3013645..3014013	Pseudomonas mendocina ymp	5107896
YP_001188233.1	CDS	ligA	NC_009439.1	3014153	3016513	R	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA	complement(3014153..3016513)	Pseudomonas mendocina ymp	5107897
YP_001188234.1	CDS	zipA	NC_009439.1	3016574	3017395	R	interacts directly with the cell division protein ftsZ; probable receptor for the septal ring structure, may anchor it to the inner-membrane; cell division protein ZipA	complement(3016574..3017395)	Pseudomonas mendocina ymp	5107898
YP_001188235.1	CDS	Pmen_2748	NC_009439.1	3017566	3021054	R	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; condensin subunit Smc	complement(3017566..3021054)	Pseudomonas mendocina ymp	5107544
YP_001188236.1	CDS	Pmen_2749	NC_009439.1	3021061	3021720	R	PFAM: regulatory protein GntR, HTH; GntR family transcriptional regulator	complement(3021061..3021720)	Pseudomonas mendocina ymp	5107545
YP_001188237.1	CDS	Pmen_2750	NC_009439.1	3021953	3023086	D	PFAM: fatty acid desaturase; alkane 1-monooxygenase	3021953..3023086	Pseudomonas mendocina ymp	5107546
YP_001188238.1	CDS	Pmen_2751	NC_009439.1	3023473	3024912	D	PFAM: ferredoxin; molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; FAD-binding molybdopterin dehydrogenase	3023473..3024912	Pseudomonas mendocina ymp	5107547
YP_001188239.1	CDS	Pmen_2752	NC_009439.1	3024940	3027336	D	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; xanthine oxidase	3024940..3027336	Pseudomonas mendocina ymp	5107548
YP_001188240.1	CDS	Pmen_2753	NC_009439.1	3027618	3028448	D	PFAM: protein of unknown function DUF182; molybdenum cofactor sulfurylase	3027618..3028448	Pseudomonas mendocina ymp	5107549
YP_001188241.1	CDS	Pmen_2754	NC_009439.1	3028619	3029920	D	Catalyzes the deamination of guanine; guanine deaminase	3028619..3029920	Pseudomonas mendocina ymp	5107550
YP_001188242.1	CDS	Pmen_2755	NC_009439.1	3030057	3030824	R	PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator	complement(3030057..3030824)	Pseudomonas mendocina ymp	5107551
YP_001188243.1	CDS	Pmen_2756	NC_009439.1	3031407	3032747	D	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; xanthine/uracil/vitamin C permease	3031407..3032747	Pseudomonas mendocina ymp	5107552
YP_001188244.1	CDS	Pmen_2757	NC_009439.1	3033051	3033404	R	PFAM: Transthyretin; transthyretin	complement(3033051..3033404)	Pseudomonas mendocina ymp	5107553
YP_001188245.1	CDS	Pmen_2758	NC_009439.1	3033807	3034733	D	PFAM: polysaccharide deacetylase; chitin deacetylase	3033807..3034733	Pseudomonas mendocina ymp	5107554
YP_001188246.1	CDS	Pmen_2759	NC_009439.1	3034730	3035260	D	hypothetical protein	3034730..3035260	Pseudomonas mendocina ymp	5107555
YP_001188247.1	CDS	Pmen_2760	NC_009439.1	3035306	3035809	D	catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase	3035306..3035809	Pseudomonas mendocina ymp	5107556
YP_001188248.1	CDS	Pmen_2761	NC_009439.1	3035857	3037149	D	PFAM: protein of unknown function DUF989; hypothetical protein	3035857..3037149	Pseudomonas mendocina ymp	5107557
YP_001188249.1	CDS	Pmen_2762	NC_009439.1	3037449	3038951	D	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease	3037449..3038951	Pseudomonas mendocina ymp	5107558
YP_001188250.1	CDS	Pmen_2763	NC_009439.1	3039029	3039889	D	nucleoside-binding outer membrane protein-like protein	3039029..3039889	Pseudomonas mendocina ymp	5107559
YP_001188251.1	CDS	Pmen_2764	NC_009439.1	3040321	3041874	D	PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease	3040321..3041874	Pseudomonas mendocina ymp	5107560
YP_001188252.1	CDS	Pmen_2765	NC_009439.1	3042052	3042891	R	hypothetical protein	complement(3042052..3042891)	Pseudomonas mendocina ymp	5107561
YP_001188253.1	CDS	Pmen_2766	NC_009439.1	3042936	3043931	R	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A	complement(3042936..3043931)	Pseudomonas mendocina ymp	5107562
YP_001188254.1	CDS	Pmen_2767	NC_009439.1	3044144	3044788	D	PFAM: regulatory protein, TetR; Tetracycline transcriptional regulator YcdC, C-terminal domain protein; TetR family transcriptional regulator	3044144..3044788	Pseudomonas mendocina ymp	5107563
YP_001188255.1	CDS	Pmen_2768	NC_009439.1	3045339	3045773	R	PFAM: protein of unknown function DUF336; hypothetical protein	complement(3045339..3045773)	Pseudomonas mendocina ymp	5107564
YP_001188256.1	CDS	Pmen_2769	NC_009439.1	3046105	3047880	D	catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase	3046105..3047880	Pseudomonas mendocina ymp	5107565
YP_001188257.1	CDS	Pmen_2770	NC_009439.1	3047983	3048780	D	PFAM: Xylose isomerase domain protein TIM barrel; hydroxypyruvate isomerase	3047983..3048780	Pseudomonas mendocina ymp	5107566
YP_001188258.1	CDS	Pmen_2771	NC_009439.1	3048794	3049684	D	TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase	3048794..3049684	Pseudomonas mendocina ymp	5107567
YP_001188259.1	CDS	Pmen_2772	NC_009439.1	3049983	3051257	D	PFAM: MOFRL domain protein; glycerate 2-kinase	3049983..3051257	Pseudomonas mendocina ymp	5107568
YP_001188260.1	CDS	Pmen_2773	NC_009439.1	3051254	3052669	D	catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase	3051254..3052669	Pseudomonas mendocina ymp	5107569
YP_001188261.1	CDS	Pmen_2774	NC_009439.1	3052914	3053825	D	PFAM: Urea transporter; Urea transporter	3052914..3053825	Pseudomonas mendocina ymp	5107570
YP_001188262.1	CDS	Pmen_2775	NC_009439.1	3053983	3055008	D	DNA topoisomerase	3053983..3055008	Pseudomonas mendocina ymp	5107571
YP_001188263.1	CDS	Pmen_2776	NC_009439.1	3055272	3056735	R	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein	complement(3055272..3056735)	Pseudomonas mendocina ymp	5107572
YP_001188264.1	CDS	Pmen_2777	NC_009439.1	3056732	3059776	R	PFAM: acriflavin resistance protein; acriflavin resistance protein	complement(3056732..3059776)	Pseudomonas mendocina ymp	5107573
YP_001188265.1	CDS	Pmen_2778	NC_009439.1	3059781	3060860	R	TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit	complement(3059781..3060860)	Pseudomonas mendocina ymp	5107574
YP_001188266.1	CDS	Pmen_2779	NC_009439.1	3061289	3061672	D	hypothetical protein	3061289..3061672	Pseudomonas mendocina ymp	5107575
YP_001188267.1	CDS	Pmen_2780	NC_009439.1	3061756	3062610	D	PFAM: Ion transport protein; Ion transport 2 domain protein; Ion transport protein	3061756..3062610	Pseudomonas mendocina ymp	5107576
YP_001188268.1	CDS	Pmen_2781	NC_009439.1	3062693	3064150	D	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; anion transporter	3062693..3064150	Pseudomonas mendocina ymp	5107577
YP_001188269.1	CDS	Pmen_2782	NC_009439.1	3064224	3064589	R	hypothetical protein	complement(3064224..3064589)	Pseudomonas mendocina ymp	5107578
YP_001188270.1	CDS	Pmen_2783	NC_009439.1	3064586	3065797	R	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein	complement(3064586..3065797)	Pseudomonas mendocina ymp	5107579
YP_001188271.1	CDS	Pmen_2784	NC_009439.1	3065794	3066282	R	PFAM: cytochrome C biogenesis protein; cytochrome C biogenesis protein	complement(3065794..3066282)	Pseudomonas mendocina ymp	5107580
YP_001188272.1	CDS	Pmen_2785	NC_009439.1	3066279	3066818	R	TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; periplasmic protein thiol--disulfide oxidoreductase DsbE	complement(3066279..3066818)	Pseudomonas mendocina ymp	5107581
YP_001188273.1	CDS	Pmen_2786	NC_009439.1	3066815	3068788	R	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF	complement(3066815..3068788)	Pseudomonas mendocina ymp	5107582
YP_001188274.1	CDS	Pmen_2787	NC_009439.1	3068785	3069270	R	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE	complement(3068785..3069270)	Pseudomonas mendocina ymp	5107583
YP_001188275.1	CDS	Pmen_2788	NC_009439.1	3069267	3069443	R	PFAM: Heme exporter protein D (CcmD); Heme exporter protein CcmD	complement(3069267..3069443)	Pseudomonas mendocina ymp	5107584
YP_001188276.1	CDS	Pmen_2789	NC_009439.1	3069440	3070195	R	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; heme exporter protein CcmC	complement(3069440..3070195)	Pseudomonas mendocina ymp	5107585
YP_001188277.1	CDS	Pmen_2790	NC_009439.1	3070283	3070954	R	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB	complement(3070283..3070954)	Pseudomonas mendocina ymp	5107586
YP_001188278.1	CDS	Pmen_2791	NC_009439.1	3070951	3071595	R	ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA	complement(3070951..3071595)	Pseudomonas mendocina ymp	5107587
YP_001188279.1	CDS	Pmen_2792	NC_009439.1	3071793	3073322	D	hypothetical protein	3071793..3073322	Pseudomonas mendocina ymp	5107588
YP_001188280.1	CDS	Pmen_2793	NC_009439.1	3073319	3073663	D	flagellar protein FhlB-like protein	3073319..3073663	Pseudomonas mendocina ymp	5107589
YP_001188281.1	CDS	Pmen_2794	NC_009439.1	3073644	3074087	R	SMART: Rhodanese domain protein; rhodanese domain-containing protein	complement(3073644..3074087)	Pseudomonas mendocina ymp	5107590
YP_001188282.1	CDS	Pmen_2795	NC_009439.1	3074246	3074653	R	hypothetical protein	complement(3074246..3074653)	Pseudomonas mendocina ymp	5107591
YP_001188283.1	CDS	Pmen_2796	NC_009439.1	3074653	3075132	R	PFAM: CheW domain protein; putative CheW protein	complement(3074653..3075132)	Pseudomonas mendocina ymp	5107592
YP_001188284.1	CDS	Pmen_2797	NC_009439.1	3075228	3076025	R	PFAM: CheW domain protein; putative CheW protein	complement(3075228..3076025)	Pseudomonas mendocina ymp	5107593
YP_001188285.1	CDS	Pmen_2798	NC_009439.1	3076113	3076901	R	PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase	complement(3076113..3076901)	Pseudomonas mendocina ymp	5107594
YP_001188286.1	CDS	Pmen_2799	NC_009439.1	3076984	3077793	R	Homologous to MotB. These organism have both MotB and MotD. With MotC (a MotA homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. Either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; flagellar motor protein MotD	complement(3076984..3077793)	Pseudomonas mendocina ymp	5107595
YP_001188287.1	CDS	motC	NC_009439.1	3077806	3078546	R	homologous to MotA; this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; these organisms have both MotA and MotC; flagellar motor protein	complement(3077806..3078546)	Pseudomonas mendocina ymp	5107596
YP_001188288.1	CDS	Pmen_2801	NC_009439.1	3078572	3079699	R	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase	complement(3078572..3079699)	Pseudomonas mendocina ymp	5107597
YP_001188289.1	CDS	Pmen_2802	NC_009439.1	3079742	3081955	R	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase	complement(3079742..3081955)	Pseudomonas mendocina ymp	5107598
YP_001188290.1	CDS	Pmen_2803	NC_009439.1	3081968	3082756	R	PFAM: Chemotaxis phosphatase, CheZ; chemotaxis phosphatase, CheZ	complement(3081968..3082756)	Pseudomonas mendocina ymp	5107599
YP_001188291.1	CDS	Pmen_2804	NC_009439.1	3082776	3083195	R	PFAM: response regulator receiver; response regulator receiver protein	complement(3082776..3083195)	Pseudomonas mendocina ymp	5107600
YP_001188292.1	CDS	fliA	NC_009439.1	3083228	3083974	R	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor	complement(3083228..3083974)	Pseudomonas mendocina ymp	5107601
YP_001188293.1	CDS	Pmen_2806	NC_009439.1	3083971	3084801	R	PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase	complement(3083971..3084801)	Pseudomonas mendocina ymp	5107602
YP_001188294.1	CDS	flhF	NC_009439.1	3084892	3086205	R	positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF	complement(3084892..3086205)	Pseudomonas mendocina ymp	5107603
YP_001188295.1	CDS	flhA	NC_009439.1	3086217	3088364	R	membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA	complement(3086217..3088364)	Pseudomonas mendocina ymp	5107604
YP_001188296.1	CDS	flhB	NC_009439.1	3088449	3089585	R	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB	complement(3088449..3089585)	Pseudomonas mendocina ymp	5107605
YP_001188297.1	CDS	fliR	NC_009439.1	3089595	3090371	R	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR	complement(3089595..3090371)	Pseudomonas mendocina ymp	5107606
YP_001188298.1	CDS	fliQ	NC_009439.1	3090385	3090654	R	with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ	complement(3090385..3090654)	Pseudomonas mendocina ymp	5107607
YP_001188299.1	CDS	fliP	NC_009439.1	3090666	3091451	R	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP	complement(3090666..3091451)	Pseudomonas mendocina ymp	5107608
YP_001188300.1	CDS	Pmen_2813	NC_009439.1	3091451	3091882	R	PFAM: flagellar biosynthesis protein, FliO; flagellar biosynthesis protein, FliO	complement(3091451..3091882)	Pseudomonas mendocina ymp	5107609
YP_001188301.1	CDS	fliN	NC_009439.1	3091885	3092352	R	One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein	complement(3091885..3092352)	Pseudomonas mendocina ymp	5107610
YP_001188302.1	CDS	fliM	NC_009439.1	3092392	3093363	R	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM	complement(3092392..3093363)	Pseudomonas mendocina ymp	5107611
YP_001188303.1	CDS	fliL	NC_009439.1	3093377	3093898	R	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL	complement(3093377..3093898)	Pseudomonas mendocina ymp	5107612
YP_001188304.1	CDS	Pmen_2817	NC_009439.1	3094129	3095355	R	PFAM: flagellar hook-length control protein; flagellar hook-length control protein	complement(3094129..3095355)	Pseudomonas mendocina ymp	5107613
YP_001188305.1	CDS	Pmen_2818	NC_009439.1	3095420	3095803	R	PFAM: Hpt domain protein; Hpt protein	complement(3095420..3095803)	Pseudomonas mendocina ymp	5107614
YP_001188306.1	CDS	Pmen_2819	NC_009439.1	3095803	3097491	R	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; response regulator receiver protein	complement(3095803..3097491)	Pseudomonas mendocina ymp	5107615
YP_001188307.1	CDS	Pmen_2820	NC_009439.1	3097494	3097799	R	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist	complement(3097494..3097799)	Pseudomonas mendocina ymp	5107616
YP_001188308.1	CDS	fliJ	NC_009439.1	3097883	3098332	R	rod/hook and filament chaperone; flagellar biosynthesis chaperone	complement(3097883..3098332)	Pseudomonas mendocina ymp	5107617
YP_001188309.1	CDS	fliI	NC_009439.1	3098358	3099704	R	involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase	complement(3098358..3099704)	Pseudomonas mendocina ymp	5107618
YP_001188310.1	CDS	fliH	NC_009439.1	3099694	3100494	R	binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H	complement(3099694..3100494)	Pseudomonas mendocina ymp	5107619
YP_001188311.1	CDS	fliG	NC_009439.1	3100763	3101779	R	One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G	complement(3100763..3101779)	Pseudomonas mendocina ymp	5107620
YP_001188312.1	CDS	fliF	NC_009439.1	3101772	3103556	R	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein	complement(3101772..3103556)	Pseudomonas mendocina ymp	5107621
YP_001188313.1	CDS	fliE	NC_009439.1	3103567	3103896	R	forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE	complement(3103567..3103896)	Pseudomonas mendocina ymp	5107622
YP_001188314.1	CDS	Pmen_2827	NC_009439.1	3104096	3105508	R	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator	complement(3104096..3105508)	Pseudomonas mendocina ymp	5107742
YP_001188315.1	CDS	Pmen_2828	NC_009439.1	3105512	3106741	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase	complement(3105512..3106741)	Pseudomonas mendocina ymp	5107743
YP_001188316.1	CDS	Pmen_2829	NC_009439.1	3106892	3108367	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; flagellar regulatory FleQ domain protein; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator	complement(3106892..3108367)	Pseudomonas mendocina ymp	5107744
YP_001188317.1	CDS	Pmen_2830	NC_009439.1	3108627	3108920	R	hypothetical protein	complement(3108627..3108920)	Pseudomonas mendocina ymp	5107745
YP_001188318.1	CDS	fliS	NC_009439.1	3108945	3109325	R	flagellin specific chaperone; flagellar protein FliS	complement(3108945..3109325)	Pseudomonas mendocina ymp	5107746
YP_001188319.1	CDS	Pmen_2832	NC_009439.1	3109398	3109790	R	PFAM: flagellar protein FliS; flagellar protein FliS	complement(3109398..3109790)	Pseudomonas mendocina ymp	5107747
YP_001188320.1	CDS	Pmen_2833	NC_009439.1	3109790	3111253	R	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated 2 domain-containing protein	complement(3109790..3111253)	Pseudomonas mendocina ymp	5107748
YP_001188321.1	CDS	Pmen_2834	NC_009439.1	3111333	3111725	R	PFAM: flagellar protein FlaG protein; flagellar protein FlaG protein	complement(3111333..3111725)	Pseudomonas mendocina ymp	5107749
YP_001188322.1	CDS	Pmen_2835	NC_009439.1	3111798	3113276	R	PFAM: flagellin domain protein; flagellin domain-containing protein	complement(3111798..3113276)	Pseudomonas mendocina ymp	5107750
YP_001188323.1	CDS	Pmen_2836	NC_009439.1	3113531	3118810	R	PFAM: glycosyl transferase, family 2; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Methyltransferase type 11; Methyltransferase type 12; glycosyl transferase family protein	complement(3113531..3118810)	Pseudomonas mendocina ymp	5107751
YP_001188324.1	CDS	Pmen_2837	NC_009439.1	3118803	3119465	R	PFAM: Nucleotidyl transferase; nucleotidyl transferase	complement(3118803..3119465)	Pseudomonas mendocina ymp	5107752
YP_001188325.1	CDS	Pmen_2838	NC_009439.1	3119441	3120046	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase	complement(3119441..3120046)	Pseudomonas mendocina ymp	5107753
YP_001188326.1	CDS	Pmen_2839	NC_009439.1	3120043	3120813	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase	complement(3120043..3120813)	Pseudomonas mendocina ymp	5107754
YP_001188327.1	CDS	flgL	NC_009439.1	3120954	3122642	R	With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL	complement(3120954..3122642)	Pseudomonas mendocina ymp	5107755
YP_001188328.1	CDS	flgK	NC_009439.1	3122711	3124756	R	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK	complement(3122711..3124756)	Pseudomonas mendocina ymp	5107756
YP_001188329.1	CDS	flgJ	NC_009439.1	3124766	3125950	R	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ	complement(3124766..3125950)	Pseudomonas mendocina ymp	5107757
YP_001188330.1	CDS	flgI	NC_009439.1	3125965	3127125	R	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein	complement(3125965..3127125)	Pseudomonas mendocina ymp	5107758
YP_001188331.1	CDS	flgH	NC_009439.1	3127308	3128030	R	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein	complement(3127308..3128030)	Pseudomonas mendocina ymp	5107759
YP_001188332.1	CDS	flgG	NC_009439.1	3128070	3128855	R	makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG	complement(3128070..3128855)	Pseudomonas mendocina ymp	5107760
YP_001188333.1	CDS	flgF	NC_009439.1	3128902	3129642	R	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF	complement(3128902..3129642)	Pseudomonas mendocina ymp	5107761
YP_001188334.1	CDS	flgE	NC_009439.1	3129897	3131213	R	the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE	complement(3129897..3131213)	Pseudomonas mendocina ymp	5107762
YP_001188335.1	CDS	flgD	NC_009439.1	3131250	3131915	R	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein	complement(3131250..3131915)	Pseudomonas mendocina ymp	5107763
YP_001188336.1	CDS	flgC	NC_009439.1	3131937	3132380	R	with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC	complement(3131937..3132380)	Pseudomonas mendocina ymp	5107764
YP_001188337.1	CDS	flgB	NC_009439.1	3132392	3132799	R	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB	complement(3132392..3132799)	Pseudomonas mendocina ymp	5107765
YP_001188338.1	CDS	Pmen_2851	NC_009439.1	3133122	3133970	R	PFAM: MCP methyltransferase, CheR-type; chemotaxis protein CheR	complement(3133122..3133970)	Pseudomonas mendocina ymp	5107766
YP_001188339.1	CDS	Pmen_2852	NC_009439.1	3133995	3134927	R	PFAM: response regulator receiver; CheW domain protein; putative CheW protein	complement(3133995..3134927)	Pseudomonas mendocina ymp	5107767
YP_001188340.1	CDS	flgA	NC_009439.1	3135005	3135763	D	required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA	3135005..3135763	Pseudomonas mendocina ymp	5107768
YP_001188341.1	CDS	Pmen_2854	NC_009439.1	3135897	3136232	D	PFAM: Anti-sigma-28 factor, FlgM family protein; anti-sigma-28 factor FlgM	3135897..3136232	Pseudomonas mendocina ymp	5107769
YP_001188342.1	CDS	Pmen_2855	NC_009439.1	3136283	3136750	D	PFAM: FlgN family protein; FlgN family protein	3136283..3136750	Pseudomonas mendocina ymp	5107770
YP_001188343.1	CDS	Pmen_2856	NC_009439.1	3136845	3137594	D	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	3136845..3137594	Pseudomonas mendocina ymp	5107771
YP_001188344.1	CDS	Pmen_2857	NC_009439.1	3137601	3138911	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(3137601..3138911)	Pseudomonas mendocina ymp	5107772
YP_001188345.1	CDS	Pmen_2858	NC_009439.1	3138963	3140306	R	PFAM: glutamine synthetase, catalytic region; glutamate--putrescine ligase	complement(3138963..3140306)	Pseudomonas mendocina ymp	5107773
YP_001188346.1	CDS	Pmen_2859	NC_009439.1	3140586	3141809	D	involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT	3140586..3141809	Pseudomonas mendocina ymp	5107774
YP_001188347.1	CDS	Pmen_2860	NC_009439.1	3141964	3142731	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	3141964..3142731	Pseudomonas mendocina ymp	5107775
YP_001188348.1	CDS	Pmen_2861	NC_009439.1	3142742	3143485	R	PFAM: ferric iron reductase; ferric iron reductase	complement(3142742..3143485)	Pseudomonas mendocina ymp	5107776
YP_001188349.1	CDS	Pmen_2862	NC_009439.1	3143507	3144493	R	hypothetical protein	complement(3143507..3144493)	Pseudomonas mendocina ymp	5107777
YP_001188350.1	CDS	Pmen_2863	NC_009439.1	3144490	3145476	R	PFAM: Taurine catabolism dioxygenase TauD/TfdA; taurine catabolism dioxygenase TauD/TfdA	complement(3144490..3145476)	Pseudomonas mendocina ymp	5107778
YP_001188351.1	CDS	Pmen_2864	NC_009439.1	3145502	3145702	R	PFAM: MbtH domain protein; MbtH domain-containing protein	complement(3145502..3145702)	Pseudomonas mendocina ymp	5107779
YP_001188352.1	CDS	Pmen_2865	NC_009439.1	3145791	3146702	R	PFAM: periplasmic binding protein; periplasmic binding protein	complement(3145791..3146702)	Pseudomonas mendocina ymp	5107780
YP_001188353.1	CDS	Pmen_2866	NC_009439.1	3146713	3148749	R	part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease	complement(3146713..3148749)	Pseudomonas mendocina ymp	5107781
YP_001188354.1	CDS	Pmen_2867	NC_009439.1	3148820	3151021	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor	complement(3148820..3151021)	Pseudomonas mendocina ymp	5107782
YP_001188355.1	CDS	Pmen_2868	NC_009439.1	3151270	3152691	R	catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase	complement(3151270..3152691)	Pseudomonas mendocina ymp	5107783
YP_001188356.1	CDS	Pmen_2869	NC_009439.1	3152681	3168667	R	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; amino acid adenylation domain-containing protein	complement(3152681..3168667)	Pseudomonas mendocina ymp	5107784
YP_001188357.1	CDS	Pmen_2870	NC_009439.1	3168664	3178359	R	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; amino acid adenylation domain-containing protein	complement(3168664..3178359)	Pseudomonas mendocina ymp	5107785
YP_001188358.1	CDS	Pmen_2871	NC_009439.1	3178417	3179733	R	lysine/ornithine N-monooxygenase-like protein	complement(3178417..3179733)	Pseudomonas mendocina ymp	5107786
YP_001188359.1	CDS	Pmen_2872	NC_009439.1	3179919	3181595	R	TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase; cyclic peptide transporter	complement(3179919..3181595)	Pseudomonas mendocina ymp	5107787
YP_001188360.1	CDS	Pmen_2873	NC_009439.1	3181596	3182228	R	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor	complement(3181596..3182228)	Pseudomonas mendocina ymp	5107788
YP_001188361.1	CDS	Pmen_2874	NC_009439.1	3182662	3184056	R	PFAM: sodium:neurotransmitter symporter; sodium:neurotransmitter symporter	complement(3182662..3184056)	Pseudomonas mendocina ymp	5107273
YP_001188362.1	CDS	Pmen_2875	NC_009439.1	3184188	3185246	R	PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase	complement(3184188..3185246)	Pseudomonas mendocina ymp	5107790
YP_001188363.1	CDS	Pmen_2876	NC_009439.1	3185326	3188793	R	Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase	complement(3185326..3188793)	Pseudomonas mendocina ymp	5107791
YP_001188364.1	CDS	Pmen_2877	NC_009439.1	3188980	3189459	D	PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator	3188980..3189459	Pseudomonas mendocina ymp	5107792
YP_001188365.1	CDS	phnP	NC_009439.1	3189588	3190352	R	required for the use of phosphonates and phosphite as phosphorus sources; carbon-phosphorus lyase complex accessory protein	complement(3189588..3190352)	Pseudomonas mendocina ymp	5107793
YP_001188366.1	CDS	Pmen_2879	NC_009439.1	3190343	3190951	R	TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; phosphonate metabolism protein/1,5-bisphosphokinase PhnN	complement(3190343..3190951)	Pseudomonas mendocina ymp	5107794
YP_001188367.1	CDS	Pmen_2880	NC_009439.1	3190951	3192096	R	TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; phosphonate metabolism protein PhnM	complement(3190951..3192096)	Pseudomonas mendocina ymp	5107795
YP_001188368.1	CDS	Pmen_2881	NC_009439.1	3192086	3192802	R	TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL	complement(3192086..3192802)	Pseudomonas mendocina ymp	5107796
YP_001188369.1	CDS	phnK	NC_009439.1	3192984	3193793	R	TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK	complement(3192984..3193793)	Pseudomonas mendocina ymp	5107797
YP_001188370.1	CDS	Pmen_2883	NC_009439.1	3193790	3194659	R	PFAM: phosphonate metabolism PhnJ; phosphonate metabolism PhnJ	complement(3193790..3194659)	Pseudomonas mendocina ymp	5107798
YP_001188371.1	CDS	Pmen_2884	NC_009439.1	3194659	3195735	R	PFAM: phosphonate metabolism; phosphonate metabolism protein	complement(3194659..3195735)	Pseudomonas mendocina ymp	5107799
YP_001188372.1	CDS	phnH	NC_009439.1	3195735	3196346	R	PFAM: phosphonate metabolism; carbon-phosphorus lyase complex subunit	complement(3195735..3196346)	Pseudomonas mendocina ymp	5107800
YP_001188373.1	CDS	Pmen_2886	NC_009439.1	3196346	3196807	R	PFAM: phosphonate metabolism PhnG; phosphonate metabolism PhnG	complement(3196346..3196807)	Pseudomonas mendocina ymp	5107801
YP_001188374.1	CDS	Pmen_2887	NC_009439.1	3196807	3197529	R	TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; GntR family transcriptional regulator	complement(3196807..3197529)	Pseudomonas mendocina ymp	5107802
YP_001188375.1	CDS	Pmen_2888	NC_009439.1	3197550	3198341	R	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit	complement(3197550..3198341)	Pseudomonas mendocina ymp	5107803
YP_001188376.1	CDS	Pmen_2889	NC_009439.1	3198405	3199406	R	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein	complement(3198405..3199406)	Pseudomonas mendocina ymp	5107804
YP_001188377.1	CDS	Pmen_2890	NC_009439.1	3199460	3200284	R	TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase	complement(3199460..3200284)	Pseudomonas mendocina ymp	5107805
YP_001188378.1	CDS	Pmen_2891	NC_009439.1	3200670	3200996	D	PFAM: Arc domain protein DNA binding domain protein; Arc domain-containing protein	3200670..3200996	Pseudomonas mendocina ymp	5107806
YP_001188379.1	CDS	Pmen_2892	NC_009439.1	3201105	3202241	R	TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta	complement(3201105..3202241)	Pseudomonas mendocina ymp	5107807
YP_001188380.1	CDS	Pmen_2893	NC_009439.1	3202252	3204030	R	catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase	complement(3202252..3204030)	Pseudomonas mendocina ymp	5107808
YP_001188381.1	CDS	Pmen_2894	NC_009439.1	3204055	3204351	R	PFAM: sodium pump decarboxylase, gamma subunit; sodium pump decarboxylase subunit gamma	complement(3204055..3204351)	Pseudomonas mendocina ymp	5107809
YP_001188382.1	CDS	Pmen_2895	NC_009439.1	3204511	3205488	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; AraC family transcriptional regulator	complement(3204511..3205488)	Pseudomonas mendocina ymp	5107810
YP_001188383.1	CDS	Pmen_2896	NC_009439.1	3205584	3206306	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	3205584..3206306	Pseudomonas mendocina ymp	5107811
YP_001188384.1	CDS	Pmen_2897	NC_009439.1	3206318	3206647	D	hypothetical protein	3206318..3206647	Pseudomonas mendocina ymp	5107812
YP_001188385.1	CDS	Pmen_2898	NC_009439.1	3206677	3207138	D	ketosteroid isomerase-like protein	3206677..3207138	Pseudomonas mendocina ymp	5107813
YP_001188386.1	CDS	Pmen_2899	NC_009439.1	3207140	3208582	R	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; magnesium transporter	complement(3207140..3208582)	Pseudomonas mendocina ymp	5107814
YP_001188387.1	CDS	Pmen_2900	NC_009439.1	3208905	3209399	D	hypothetical protein	3208905..3209399	Pseudomonas mendocina ymp	5107815
YP_001188388.1	CDS	Pmen_2901	NC_009439.1	3210012	3210197	R	affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator	complement(3210012..3210197)	Pseudomonas mendocina ymp	5107277
YP_001188389.1	CDS	Pmen_2902	NC_009439.1	3210386	3211660	R	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase	complement(3210386..3211660)	Pseudomonas mendocina ymp	5107817
YP_001188390.1	CDS	alaS	NC_009439.1	3211727	3214405	R	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase	complement(3211727..3214405)	Pseudomonas mendocina ymp	5107818
YP_001188391.1	CDS	Pmen_2904	NC_009439.1	3214478	3215482	R	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; L-threonine aldolase	complement(3214478..3215482)	Pseudomonas mendocina ymp	5107819
YP_001188392.1	CDS	Pmen_2905	NC_009439.1	3215641	3216654	R	catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase	complement(3215641..3216654)	Pseudomonas mendocina ymp	5107623
YP_001188393.1	CDS	Pmen_2906	NC_009439.1	3216672	3216950	R	hypothetical protein	complement(3216672..3216950)	Pseudomonas mendocina ymp	5107624
YP_001188394.1	CDS	Pmen_2907	NC_009439.1	3216976	3218322	R	catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase	complement(3216976..3218322)	Pseudomonas mendocina ymp	5107625
YP_001188395.1	CDS	astD	NC_009439.1	3218322	3219785	R	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase	complement(3218322..3219785)	Pseudomonas mendocina ymp	5107626
YP_001188396.1	CDS	Pmen_2909	NC_009439.1	3219850	3220866	R	PFAM: arginine N-succinyltransferase beta subunit; arginine succinyltransferase	complement(3219850..3220866)	Pseudomonas mendocina ymp	5107627
YP_001188397.1	CDS	Pmen_2910	NC_009439.1	3220924	3221940	R	PFAM: arginine N-succinyltransferase beta subunit; arginine succinyltransferase	complement(3220924..3221940)	Pseudomonas mendocina ymp	5107628
YP_001188398.1	CDS	argD	NC_009439.1	3222074	3223294	R	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein	complement(3222074..3223294)	Pseudomonas mendocina ymp	5107629
YP_001188399.1	CDS	Pmen_2912	NC_009439.1	3223721	3224701	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	complement(3223721..3224701)	Pseudomonas mendocina ymp	5107630
YP_001188400.1	CDS	Pmen_2913	NC_009439.1	3224777	3225541	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(3224777..3225541)	Pseudomonas mendocina ymp	5107631
YP_001188401.1	CDS	Pmen_2914	NC_009439.1	3225569	3226267	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	complement(3225569..3226267)	Pseudomonas mendocina ymp	5107632
YP_001188402.1	CDS	Pmen_2915	NC_009439.1	3226264	3226953	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	complement(3226264..3226953)	Pseudomonas mendocina ymp	5107633
YP_001188403.1	CDS	Pmen_2916	NC_009439.1	3227173	3227946	R	TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein, family 3; cationic amino acid ABC transporter periplasmic binding protein	complement(3227173..3227946)	Pseudomonas mendocina ymp	5107634
YP_001188404.1	CDS	Pmen_2917	NC_009439.1	3228402	3228926	R	PFAM: General secretion pathway M protein; general secretion pathway M protein	complement(3228402..3228926)	Pseudomonas mendocina ymp	5107635
YP_001188405.1	CDS	Pmen_2918	NC_009439.1	3228929	3230068	R	TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; general secretion pathway protein L	complement(3228929..3230068)	Pseudomonas mendocina ymp	5107636
YP_001188406.1	CDS	Pmen_2919	NC_009439.1	3230065	3231039	R	PFAM: General secretion pathway protein K; general secretion pathway protein K	complement(3230065..3231039)	Pseudomonas mendocina ymp	5107637
YP_001188407.1	CDS	Pmen_2920	NC_009439.1	3231036	3231755	R	TIGRFAM: general secretion pathway protein J; general secretion pathway protein J	complement(3231036..3231755)	Pseudomonas mendocina ymp	5107638
YP_001188408.1	CDS	Pmen_2921	NC_009439.1	3231752	3232135	R	TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; general secretion pathway protein I	complement(3231752..3232135)	Pseudomonas mendocina ymp	5107639
YP_001188409.1	CDS	Pmen_2922	NC_009439.1	3232132	3232713	R	TIGRFAM: general secretion pathway protein H; general secretion pathway protein H	complement(3232132..3232713)	Pseudomonas mendocina ymp	5107640
YP_001188410.1	CDS	Pmen_2923	NC_009439.1	3232685	3233110	R	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; general secretion pathway protein G	complement(3232685..3233110)	Pseudomonas mendocina ymp	5107641
YP_001188411.1	CDS	Pmen_2924	NC_009439.1	3233114	3234331	R	TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; general secretion pathway protein F	complement(3233114..3234331)	Pseudomonas mendocina ymp	5107642
YP_001188412.1	CDS	Pmen_2925	NC_009439.1	3234354	3235841	R	TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; general secretory pathway protein E	complement(3234354..3235841)	Pseudomonas mendocina ymp	5107643
YP_001188413.1	CDS	Pmen_2926	NC_009439.1	3236198	3236839	D	hypothetical protein	3236198..3236839	Pseudomonas mendocina ymp	5107644
YP_001188414.1	CDS	Pmen_2927	NC_009439.1	3236844	3238781	D	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; general secretion pathway protein D	3236844..3238781	Pseudomonas mendocina ymp	5107645
YP_001188415.1	CDS	Pmen_2928	NC_009439.1	3238916	3243757	R	PFAM: NAD-glutamate dehydrogenase; glutamate dehydrogenase	complement(3238916..3243757)	Pseudomonas mendocina ymp	5107646
YP_001188416.1	CDS	Pmen_2929	NC_009439.1	3244197	3245156	D	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase	3244197..3245156	Pseudomonas mendocina ymp	5107647
YP_001188417.1	CDS	Pmen_2930	NC_009439.1	3245212	3246201	D	PFAM: protein of unknown function DUF58; hypothetical protein	3245212..3246201	Pseudomonas mendocina ymp	5107648
YP_001188418.1	CDS	Pmen_2931	NC_009439.1	3246198	3246692	D	hypothetical protein	3246198..3246692	Pseudomonas mendocina ymp	5107649
YP_001188419.1	CDS	Pmen_2932	NC_009439.1	3246685	3247689	D	PFAM: von Willebrand factor, type A; von Willebrand factor type A domain-containing protein	3246685..3247689	Pseudomonas mendocina ymp	5107650
YP_001188420.1	CDS	Pmen_2933	NC_009439.1	3247686	3249452	D	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein	3247686..3249452	Pseudomonas mendocina ymp	5107651
YP_001188421.1	CDS	Pmen_2934	NC_009439.1	3249449	3251089	D	hypothetical protein	3249449..3251089	Pseudomonas mendocina ymp	5107652
YP_001188422.1	CDS	Pmen_2935	NC_009439.1	3251464	3253818	R	PFAM: Patched family protein; hypothetical protein	complement(3251464..3253818)	Pseudomonas mendocina ymp	5107653
YP_001188423.1	CDS	Pmen_2936	NC_009439.1	3253837	3254928	R	related to photosystem II stability/assembly factor; hypothetical protein	complement(3253837..3254928)	Pseudomonas mendocina ymp	5107654
YP_001188424.1	CDS	Pmen_2937	NC_009439.1	3255122	3256492	R	PFAM: protein of unknown function DUF1329; hypothetical protein	complement(3255122..3256492)	Pseudomonas mendocina ymp	5107655
YP_001188425.1	CDS	Pmen_2938	NC_009439.1	3256561	3258558	R	PFAM: protein of unknown function DUF1302; hypothetical protein	complement(3256561..3258558)	Pseudomonas mendocina ymp	5107656
YP_001188426.1	CDS	pepN	NC_009439.1	3259004	3261661	R	TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; aminopeptidase N	complement(3259004..3261661)	Pseudomonas mendocina ymp	5107657
YP_001188427.1	CDS	Pmen_2940	NC_009439.1	3261713	3262516	R	hypothetical protein	complement(3261713..3262516)	Pseudomonas mendocina ymp	5107658
YP_001188428.1	CDS	Pmen_2941	NC_009439.1	3262549	3262812	R	PFAM: protein of unknown function DUF1315; hypothetical protein	complement(3262549..3262812)	Pseudomonas mendocina ymp	5107659
YP_001188429.1	CDS	Pmen_2942	NC_009439.1	3262892	3263752	R	PFAM: Rhomboid family protein; rhomboid family protein	complement(3262892..3263752)	Pseudomonas mendocina ymp	5107660
YP_001188430.1	CDS	Pmen_2943	NC_009439.1	3263749	3264723	R	PFAM: metallophosphoesterase; metallophosphoesterase	complement(3263749..3264723)	Pseudomonas mendocina ymp	5107661
YP_001188431.1	CDS	ppnK	NC_009439.1	3264724	3265611	R	catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase	complement(3264724..3265611)	Pseudomonas mendocina ymp	5107662
YP_001188432.1	CDS	Pmen_2945	NC_009439.1	3265695	3266663	D	hypothetical protein	3265695..3266663	Pseudomonas mendocina ymp	5107663
YP_001188433.1	CDS	Pmen_2946	NC_009439.1	3266664	3267773	R	PFAM: cyclic nucleotide-binding; SMART: Rhodanese domain protein; cyclic nucleotide-binding protein	complement(3266664..3267773)	Pseudomonas mendocina ymp	5107664
YP_001188434.1	CDS	Pmen_2947	NC_009439.1	3267796	3268740	R	1-aminocyclopropane-1-carboxylate deaminase	complement(3267796..3268740)	Pseudomonas mendocina ymp	5107665
YP_001188435.1	CDS	Pmen_2948	NC_009439.1	3268743	3270110	R	hypothetical protein	complement(3268743..3270110)	Pseudomonas mendocina ymp	5107666
YP_001188436.1	CDS	Pmen_2949	NC_009439.1	3270674	3271630	D	TIGRFAM: TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein	3270674..3271630	Pseudomonas mendocina ymp	5107667
YP_001188437.1	CDS	Pmen_2950	NC_009439.1	3271665	3272096	R	hypothetical protein	complement(3271665..3272096)	Pseudomonas mendocina ymp	5107668
YP_001188438.1	CDS	Pmen_2951	NC_009439.1	3272160	3274193	R	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; 2,4-dienoyl-CoA reductase	complement(3272160..3274193)	Pseudomonas mendocina ymp	5107669
YP_001188439.1	CDS	Pmen_2952	NC_009439.1	3274396	3275421	D	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	3274396..3275421	Pseudomonas mendocina ymp	5107670
YP_001188440.1	CDS	Pmen_2953	NC_009439.1	3275418	3276491	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	3275418..3276491	Pseudomonas mendocina ymp	5107671
YP_001188441.1	CDS	Pmen_2954	NC_009439.1	3277116	3277631	R	PFAM: regulatory protein, MarR; MarR family transcriptional regulator	complement(3277116..3277631)	Pseudomonas mendocina ymp	5107280
YP_001188442.1	CDS	Pmen_2955	NC_009439.1	3277707	3279476	D	TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; asparagine synthase	3277707..3279476	Pseudomonas mendocina ymp	5107673
YP_001188443.1	CDS	Pmen_2956	NC_009439.1	3279602	3281341	D	PFAM: GCN5-related N-acetyltransferase; RimK domain protein ATP-grasp; glutathione synthase	3279602..3281341	Pseudomonas mendocina ymp	5107674
YP_001188444.1	CDS	Pmen_2957	NC_009439.1	3281453	3282652	D	PFAM: peptidase M20; peptidase M42 family protein; peptidase M42 family protein	3281453..3282652	Pseudomonas mendocina ymp	5107675
YP_001188445.1	CDS	Pmen_2958	NC_009439.1	3282837	3285581	D	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; integral membrane sensor hybrid histidine kinase	3282837..3285581	Pseudomonas mendocina ymp	5107676
YP_001188446.1	CDS	Pmen_2959	NC_009439.1	3285602	3285892	D	PFAM: protein of unknown function UPF0270; hypothetical protein	3285602..3285892	Pseudomonas mendocina ymp	5107677
YP_001188447.1	CDS	Pmen_2960	NC_009439.1	3285882	3286553	R	3-methyladenine DNA glycosylase	complement(3285882..3286553)	Pseudomonas mendocina ymp	5107678
YP_001188448.1	CDS	Pmen_2961	NC_009439.1	3286673	3287737	R	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase	complement(3286673..3287737)	Pseudomonas mendocina ymp	5107679
YP_001188449.1	CDS	Pmen_2962	NC_009439.1	3288197	3289021	R	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase	complement(3288197..3289021)	Pseudomonas mendocina ymp	5107680
YP_001188450.1	CDS	Pmen_2963	NC_009439.1	3289122	3289715	D	PFAM: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein	3289122..3289715	Pseudomonas mendocina ymp	5107681
YP_001188451.1	CDS	Pmen_2964	NC_009439.1	3289882	3290481	D	PFAM: protein of unknown function DUF1282; hypothetical protein	3289882..3290481	Pseudomonas mendocina ymp	5107682
YP_001188452.1	CDS	Pmen_2965	NC_009439.1	3290621	3291283	D	PFAM: protein of unknown function DUF1282; hypothetical protein	3290621..3291283	Pseudomonas mendocina ymp	5107683
YP_001188453.1	CDS	Pmen_2966	NC_009439.1	3291345	3291839	D	PFAM: protein of unknown function DUF335, SprT; SMART: protein of unknown function SprT; hypothetical protein	3291345..3291839	Pseudomonas mendocina ymp	5107684
YP_001188454.1	CDS	Pmen_2967	NC_009439.1	3291961	3292338	R	PFAM: protein of unknown function DUF1311; hypothetical protein	complement(3291961..3292338)	Pseudomonas mendocina ymp	5107685
YP_001188455.1	CDS	Pmen_2968	NC_009439.1	3292342	3292653	R	hypothetical protein	complement(3292342..3292653)	Pseudomonas mendocina ymp	5107686
YP_001188456.1	CDS	Pmen_2969	NC_009439.1	3292728	3293909	R	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F	complement(3292728..3293909)	Pseudomonas mendocina ymp	5107687
YP_001188457.1	CDS	Pmen_2970	NC_009439.1	3294054	3295694	R	PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase	complement(3294054..3295694)	Pseudomonas mendocina ymp	5107688
YP_001188458.1	CDS	Pmen_2971	NC_009439.1	3295796	3296935	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	complement(3295796..3296935)	Pseudomonas mendocina ymp	5107689
YP_001188459.1	CDS	Pmen_2972	NC_009439.1	3297005	3298099	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	3297005..3298099	Pseudomonas mendocina ymp	5107690
YP_001188460.1	CDS	Pmen_2973	NC_009439.1	3298233	3298784	D	hypothetical protein	3298233..3298784	Pseudomonas mendocina ymp	5107691
YP_001188461.1	CDS	Pmen_2974	NC_009439.1	3298865	3300247	D	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer	3298865..3300247	Pseudomonas mendocina ymp	5107692
YP_001188462.1	CDS	Pmen_2975	NC_009439.1	3300281	3301663	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	complement(3300281..3301663)	Pseudomonas mendocina ymp	5107693
YP_001188463.1	CDS	Pmen_2976	NC_009439.1	3301660	3302337	R	PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	complement(3301660..3302337)	Pseudomonas mendocina ymp	5107694
YP_001188464.1	CDS	Pmen_2977	NC_009439.1	3302403	3303008	R	hypothetical protein	complement(3302403..3303008)	Pseudomonas mendocina ymp	5107695
YP_001188465.1	CDS	Pmen_2978	NC_009439.1	3303122	3304294	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(3303122..3304294)	Pseudomonas mendocina ymp	5107696
YP_001188466.1	CDS	Pmen_2979	NC_009439.1	3304514	3304681	D	PFAM: periplasmic nitrate reductase NapE; periplasmic nitrate reductase NapE	3304514..3304681	Pseudomonas mendocina ymp	5107697
YP_001188467.1	CDS	Pmen_2980	NC_009439.1	3304711	3304971	D	PFAM: NapD family protein; NapD family protein	3304711..3304971	Pseudomonas mendocina ymp	5107698
YP_001188468.1	CDS	Pmen_2981	NC_009439.1	3304968	3307472	D	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit	3304968..3307472	Pseudomonas mendocina ymp	5107699
YP_001188469.1	CDS	Pmen_2982	NC_009439.1	3307484	3307969	D	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); periplasmic nitrate reductase subunit NapB	3307484..3307969	Pseudomonas mendocina ymp	5107700
YP_001188470.1	CDS	Pmen_2983	NC_009439.1	3307979	3308575	D	TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; periplasmic nitrate reductase subunit NapC	3307979..3308575	Pseudomonas mendocina ymp	5107701
YP_001188471.1	CDS	Pmen_2984	NC_009439.1	3308727	3309185	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase	complement(3308727..3309185)	Pseudomonas mendocina ymp	5107465
YP_001188472.1	CDS	Pmen_2985	NC_009439.1	3309234	3310640	D	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	3309234..3310640	Pseudomonas mendocina ymp	5107466
YP_001188473.1	CDS	Pmen_2986	NC_009439.1	3310757	3311149	D	hypothetical protein	3310757..3311149	Pseudomonas mendocina ymp	5107467
YP_001188474.1	CDS	Pmen_2987	NC_009439.1	3311197	3311445	R	hypothetical protein	complement(3311197..3311445)	Pseudomonas mendocina ymp	5107468
YP_001188475.1	CDS	Pmen_2988	NC_009439.1	3311595	3312812	R	TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; tRNA-processing RNAse BN	complement(3311595..3312812)	Pseudomonas mendocina ymp	5107469
YP_001188476.1	CDS	Pmen_2989	NC_009439.1	3312937	3313302	D	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase	3312937..3313302	Pseudomonas mendocina ymp	5107470
YP_001188477.1	CDS	Pmen_2990	NC_009439.1	3313299	3313895	D	PFAM: flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase	3313299..3313895	Pseudomonas mendocina ymp	5107471
YP_001188478.1	CDS	Pmen_2991	NC_009439.1	3313898	3314308	D	hypothetical protein	3313898..3314308	Pseudomonas mendocina ymp	5107472
YP_001188479.1	CDS	Pmen_2992	NC_009439.1	3314308	3315015	D	hypothetical protein	3314308..3315015	Pseudomonas mendocina ymp	5107473
YP_001188480.1	CDS	Pmen_2993	NC_009439.1	3314993	3315697	R	controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor	complement(3314993..3315697)	Pseudomonas mendocina ymp	5107474
YP_001188481.1	CDS	Pmen_2994	NC_009439.1	3315694	3316776	R	PFAM: protein of unknown function UPF0118; hypothetical protein	complement(3315694..3316776)	Pseudomonas mendocina ymp	5107475
YP_001188482.1	CDS	Pmen_2995	NC_009439.1	3316858	3317898	R	hypothetical protein	complement(3316858..3317898)	Pseudomonas mendocina ymp	5107476
YP_001188483.1	CDS	Pmen_2996	NC_009439.1	3318156	3319214	D	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase	3318156..3319214	Pseudomonas mendocina ymp	5107477
YP_001188484.1	CDS	purN	NC_009439.1	3319214	3319858	D	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase	3319214..3319858	Pseudomonas mendocina ymp	5107478
YP_001188485.1	CDS	Pmen_2998	NC_009439.1	3319867	3320583	D	hypothetical protein	3319867..3320583	Pseudomonas mendocina ymp	5107479
YP_001188486.1	CDS	Pmen_2999	NC_009439.1	3320705	3321913	R	PFAM: Rh family protein/ammonium transporter; Rh family protein/ammonium transporter	complement(3320705..3321913)	Pseudomonas mendocina ymp	5107480
YP_001188487.1	CDS	Pmen_3000	NC_009439.1	3322286	3322603	D	PFAM: protein of unknown function DUF883, ElaB; hypothetical protein	3322286..3322603	Pseudomonas mendocina ymp	5107481
YP_001188488.1	CDS	Pmen_3001	NC_009439.1	3322612	3322971	D	hypothetical protein	3322612..3322971	Pseudomonas mendocina ymp	5107482
YP_001188489.1	CDS	Pmen_3002	NC_009439.1	3322968	3323267	D	hypothetical protein	3322968..3323267	Pseudomonas mendocina ymp	5107483
YP_001188490.1	CDS	Pmen_3003	NC_009439.1	3323366	3324529	D	PFAM: EAL domain protein; diguanylate phosphodiesterase	3323366..3324529	Pseudomonas mendocina ymp	5107484
YP_001188491.1	CDS	Pmen_3004	NC_009439.1	3324603	3325934	D	dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein	3324603..3325934	Pseudomonas mendocina ymp	5107485
YP_001188492.1	CDS	Pmen_3005	NC_009439.1	3325947	3327008	D	hypothetical protein	3325947..3327008	Pseudomonas mendocina ymp	5107486
YP_001188493.1	CDS	Pmen_3006	NC_009439.1	3327142	3330093	D	PFAM: histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase	3327142..3330093	Pseudomonas mendocina ymp	5107487
YP_001188494.1	CDS	Pmen_3007	NC_009439.1	3330197	3330538	R	PFAM: protein of unknown function DUF469; hypothetical protein	complement(3330197..3330538)	Pseudomonas mendocina ymp	5107488
YP_001188495.1	CDS	Pmen_3008	NC_009439.1	3330724	3332160	D	TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	3330724..3332160	Pseudomonas mendocina ymp	5107489
YP_001188496.1	CDS	rlmL	NC_009439.1	3332232	3334409	R	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase	complement(3332232..3334409)	Pseudomonas mendocina ymp	5107490
YP_001188497.1	CDS	Pmen_3010	NC_009439.1	3334825	3335040	D	PFAM: ribosome modulation factor; ribosome modulation factor	3334825..3335040	Pseudomonas mendocina ymp	5107491
YP_001188498.1	CDS	Pmen_3011	NC_009439.1	3335121	3336143	R	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2	complement(3335121..3336143)	Pseudomonas mendocina ymp	5107492
YP_001188499.1	CDS	Pmen_3012	NC_009439.1	3336230	3336451	R	hypothetical protein	complement(3336230..3336451)	Pseudomonas mendocina ymp	5107493
YP_001188500.1	CDS	Pmen_3013	NC_009439.1	3336533	3337471	D	hypothetical protein	3336533..3337471	Pseudomonas mendocina ymp	5107494
YP_001188501.1	CDS	recX	NC_009439.1	3337551	3338003	R	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX	complement(3337551..3338003)	Pseudomonas mendocina ymp	5107495
YP_001188502.1	CDS	recA	NC_009439.1	3338024	3339067	R	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A	complement(3338024..3339067)	Pseudomonas mendocina ymp	5107496
YP_001188503.1	CDS	Pmen_3016	NC_009439.1	3339155	3339655	R	PFAM: CinA domain protein; CinA domain-containing protein	complement(3339155..3339655)	Pseudomonas mendocina ymp	5107497
YP_001188504.1	CDS	Pmen_3018	NC_009439.1	3341166	3342467	R	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	complement(3341166..3342467)	Pseudomonas mendocina ymp	5107281
YP_001188505.1	CDS	Pmen_3019	NC_009439.1	3343868	3344191	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin	3343868..3344191	Pseudomonas mendocina ymp	5107499
YP_001188506.1	CDS	Pmen_3020	NC_009439.1	3344674	3345681	R	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS	complement(3344674..3345681)	Pseudomonas mendocina ymp	5107500
YP_001188507.1	CDS	Pmen_3021	NC_009439.1	3345783	3346664	R	PFAM: Peptidoglycan-binding LysM; peptidase M23B; peptidase M23B	complement(3345783..3346664)	Pseudomonas mendocina ymp	5107501
YP_001188508.1	CDS	Pmen_3022	NC_009439.1	3346713	3347651	R	PFAM: protein of unknown function DUF368; hypothetical protein	complement(3346713..3347651)	Pseudomonas mendocina ymp	5107502
YP_001188509.1	CDS	pcm	NC_009439.1	3347678	3348352	R	catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase	complement(3347678..3348352)	Pseudomonas mendocina ymp	5107503
YP_001188510.1	CDS	surE	NC_009439.1	3348352	3349101	R	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE	complement(3348352..3349101)	Pseudomonas mendocina ymp	5107504
YP_001188511.1	CDS	truD	NC_009439.1	3349089	3350147	R	catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D	complement(3349089..3350147)	Pseudomonas mendocina ymp	5107505
YP_001188512.1	CDS	ispF	NC_009439.1	3350144	3350617	R	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase	complement(3350144..3350617)	Pseudomonas mendocina ymp	5107506
YP_001188513.1	CDS	Pmen_3027	NC_009439.1	3350744	3351586	R	PFAM: putative esterase; carboxylesterase	complement(3350744..3351586)	Pseudomonas mendocina ymp	5107507
YP_001188514.1	CDS	Pmen_3028	NC_009439.1	3351699	3352811	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	complement(3351699..3352811)	Pseudomonas mendocina ymp	5107508
YP_001188515.1	CDS	Pmen_3029	NC_009439.1	3352990	3353904	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	3352990..3353904	Pseudomonas mendocina ymp	5107509
YP_001188516.1	CDS	Pmen_3030	NC_009439.1	3353908	3354309	D	hypothetical protein	3353908..3354309	Pseudomonas mendocina ymp	5107510
YP_001188517.1	CDS	ispD	NC_009439.1	3354312	3355019	R	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	complement(3354312..3355019)	Pseudomonas mendocina ymp	5107511
YP_001188518.1	CDS	Pmen_3032	NC_009439.1	3355016	3355342	R	PFAM: Septum formation initiator; cell division protein FtsB	complement(3355016..3355342)	Pseudomonas mendocina ymp	5107512
YP_001188519.1	CDS	eno	NC_009439.1	3355472	3356761	R	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase	complement(3355472..3356761)	Pseudomonas mendocina ymp	5107513
YP_001188520.1	CDS	Pmen_3034	NC_009439.1	3356909	3357754	R	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase	complement(3356909..3357754)	Pseudomonas mendocina ymp	5107514
YP_001188521.1	CDS	pyrG	NC_009439.1	3357758	3359389	R	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase	complement(3357758..3359389)	Pseudomonas mendocina ymp	5107515
YP_001188522.1	CDS	Pmen_3036	NC_009439.1	3359540	3360862	R	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase domain protein; tRNA(Ile)-lysidine synthetase	complement(3359540..3360862)	Pseudomonas mendocina ymp	5107516
YP_001188523.1	CDS	Pmen_3037	NC_009439.1	3361002	3361958	R	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha	complement(3361002..3361958)	Pseudomonas mendocina ymp	5107517
YP_001188524.1	CDS	dnaE	NC_009439.1	3362079	3365609	R	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha	complement(3362079..3365609)	Pseudomonas mendocina ymp	5107518
YP_001188525.1	CDS	rnhB	NC_009439.1	3365681	3366307	R	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII	complement(3365681..3366307)	Pseudomonas mendocina ymp	5107519
YP_001188526.1	CDS	lpxB	NC_009439.1	3366307	3367440	R	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase	complement(3366307..3367440)	Pseudomonas mendocina ymp	5107520
YP_001188527.1	CDS	Pmen_3041	NC_009439.1	3367446	3368222	R	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase	complement(3367446..3368222)	Pseudomonas mendocina ymp	5107521
YP_001188528.1	CDS	fabZ	NC_009439.1	3368219	3368659	R	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase	complement(3368219..3368659)	Pseudomonas mendocina ymp	5107522
YP_001188529.1	CDS	lpxD	NC_009439.1	3368707	3369762	R	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	complement(3368707..3369762)	Pseudomonas mendocina ymp	5107523
YP_001188530.1	CDS	Pmen_3044	NC_009439.1	3369765	3370268	R	PFAM: outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp	complement(3369765..3370268)	Pseudomonas mendocina ymp	5107524
YP_001188531.1	CDS	Pmen_3045	NC_009439.1	3370313	3372673	R	PFAM: surface antigen (D15); surface antigen variable number repeat protein; surface antigen (D15)	complement(3370313..3372673)	Pseudomonas mendocina ymp	5107525
YP_001188532.1	CDS	Pmen_3046	NC_009439.1	3372761	3374113	R	TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; putative membrane-associated zinc metalloprotease	complement(3372761..3374113)	Pseudomonas mendocina ymp	5107526
YP_001188533.1	CDS	Pmen_3047	NC_009439.1	3374131	3375315	R	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase	complement(3374131..3375315)	Pseudomonas mendocina ymp	5107527
YP_001188534.1	CDS	Pmen_3048	NC_009439.1	3375312	3376127	R	PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase	complement(3375312..3376127)	Pseudomonas mendocina ymp	5107528
YP_001188535.1	CDS	Pmen_3049	NC_009439.1	3376127	3376873	R	TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl pyrophosphate synthetase	complement(3376127..3376873)	Pseudomonas mendocina ymp	5107529
YP_001188536.1	CDS	frr	NC_009439.1	3376892	3377449	R	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor	complement(3376892..3377449)	Pseudomonas mendocina ymp	5107530
YP_001188537.1	CDS	pyrH	NC_009439.1	3377446	3378189	R	Catalyzes the phosphorylation of UMP to UDP; uridylate kinase	complement(3377446..3378189)	Pseudomonas mendocina ymp	5107531
YP_001188538.1	CDS	tsf	NC_009439.1	3378373	3379236	R	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts	complement(3378373..3379236)	Pseudomonas mendocina ymp	5107532
YP_001188539.1	CDS	rpsB	NC_009439.1	3379366	3380109	R	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2	complement(3379366..3380109)	Pseudomonas mendocina ymp	5107533
YP_001188540.1	CDS	Pmen_3054	NC_009439.1	3380426	3381208	D	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase	3380426..3381208	Pseudomonas mendocina ymp	5107534
YP_001188541.1	CDS	glnD	NC_009439.1	3381297	3383996	D	Catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase	3381297..3383996	Pseudomonas mendocina ymp	5107535
YP_001188542.1	CDS	Pmen_3056	NC_009439.1	3384034	3385230	D	catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase	3384034..3385230	Pseudomonas mendocina ymp	5107536
YP_001188543.1	CDS	Pmen_3057	NC_009439.1	3385248	3385964	R	hypothetical protein	complement(3385248..3385964)	Pseudomonas mendocina ymp	5107537
YP_001188544.1	CDS	Pmen_3058	NC_009439.1	3386160	3386510	D	PFAM: arsenate reductase and related; arsenate reductase-like protein	3386160..3386510	Pseudomonas mendocina ymp	5107538
YP_001188545.1	CDS	Pmen_3059	NC_009439.1	3386547	3387581	D	tetrahydrodipicolinate N-succinyltransferase-like protein	3386547..3387581	Pseudomonas mendocina ymp	5107539
YP_001188546.1	CDS	Pmen_3060	NC_009439.1	3387731	3388954	D	PFAM: aminotransferase, class V; class V aminotransferase	3387731..3388954	Pseudomonas mendocina ymp	5107540
YP_001188547.1	CDS	Pmen_3061	NC_009439.1	3388951	3389379	D	PFAM: Fe-S metabolism associated SufE; Fe-S metabolism associated SufE	3388951..3389379	Pseudomonas mendocina ymp	5107541
YP_001188548.1	CDS	Pmen_3062	NC_009439.1	3389425	3389895	R	PFAM: protein of unknown function DUF1456; hypothetical protein	complement(3389425..3389895)	Pseudomonas mendocina ymp	5107542
YP_001188549.1	CDS	Pmen_3063	NC_009439.1	3389944	3390738	R	amino acid ABC transporter periplasmic protein	complement(3389944..3390738)	Pseudomonas mendocina ymp	5107543
YP_001188550.1	CDS	Pmen_3064	NC_009439.1	3390882	3391691	R	PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein	complement(3390882..3391691)	Pseudomonas mendocina ymp	5107387
YP_001188551.1	CDS	Pmen_3065	NC_009439.1	3391816	3392967	D	PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase	3391816..3392967	Pseudomonas mendocina ymp	5107388
YP_001188552.1	CDS	Pmen_3066	NC_009439.1	3393035	3394177	D	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase	3393035..3394177	Pseudomonas mendocina ymp	5107389
YP_001188553.1	CDS	Pmen_3067	NC_009439.1	3394174	3394986	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; rRNA (guanine-N(1)-)-methyltransferase	3394174..3394986	Pseudomonas mendocina ymp	5107390
YP_001188554.1	CDS	Pmen_3068	NC_009439.1	3394992	3395363	D	hypothetical protein	3394992..3395363	Pseudomonas mendocina ymp	5107391
YP_001188555.1	CDS	Pmen_3069	NC_009439.1	3395580	3395789	R	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding protein family protein	complement(3395580..3395789)	Pseudomonas mendocina ymp	5107392
YP_001188556.1	CDS	Pmen_3070	NC_009439.1	3396085	3397149	R	hypothetical protein	complement(3396085..3397149)	Pseudomonas mendocina ymp	5107393
YP_001188557.1	CDS	Pmen_3071	NC_009439.1	3397241	3399073	R	gliding motility ABC transporter gliding motility auxiliary component-like protein	complement(3397241..3399073)	Pseudomonas mendocina ymp	5107394
YP_001188558.1	CDS	Pmen_3072	NC_009439.1	3399083	3399814	R	hypothetical protein	complement(3399083..3399814)	Pseudomonas mendocina ymp	5107395
YP_001188559.1	CDS	Pmen_3073	NC_009439.1	3399811	3400734	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(3399811..3400734)	Pseudomonas mendocina ymp	5107396
YP_001188560.1	CDS	Pmen_3074	NC_009439.1	3400834	3401154	D	hypothetical protein	3400834..3401154	Pseudomonas mendocina ymp	5107397
YP_001188561.1	CDS	Pmen_3075	NC_009439.1	3401123	3401821	R	TIGRFAM: integron integrase; integron integrase	complement(3401123..3401821)	Pseudomonas mendocina ymp	5107398
YP_001188562.1	CDS	Pmen_3076	NC_009439.1	3402354	3402833	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	3402354..3402833	Pseudomonas mendocina ymp	5107399
YP_001188563.1	CDS	Pmen_3077	NC_009439.1	3403369	3403683	D	hypothetical protein	3403369..3403683	Pseudomonas mendocina ymp	5107400
YP_001188564.1	CDS	Pmen_3078	NC_009439.1	3403761	3404114	D	hypothetical protein	3403761..3404114	Pseudomonas mendocina ymp	5107401
YP_001188565.1	CDS	Pmen_3079	NC_009439.1	3404486	3405787	D	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	3404486..3405787	Pseudomonas mendocina ymp	5107402
YP_001188566.1	CDS	Pmen_3080	NC_009439.1	3405788	3406264	D	hypothetical protein	3405788..3406264	Pseudomonas mendocina ymp	5107403
YP_001188567.1	CDS	Pmen_3081	NC_009439.1	3406355	3406804	D	hypothetical protein	3406355..3406804	Pseudomonas mendocina ymp	5107404
YP_001188568.1	CDS	Pmen_3082	NC_009439.1	3407321	3407632	D	hypothetical protein	3407321..3407632	Pseudomonas mendocina ymp	5107405
YP_001188569.1	CDS	Pmen_3083	NC_009439.1	3408318	3408797	D	hypothetical protein	3408318..3408797	Pseudomonas mendocina ymp	5107406
YP_001188570.1	CDS	Pmen_3084	NC_009439.1	3408828	3410390	R	PFAM: transposase IS66; transposase IS66	complement(3408828..3410390)	Pseudomonas mendocina ymp	5107407
YP_001188571.1	CDS	Pmen_3085	NC_009439.1	3410410	3410769	R	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	complement(3410410..3410769)	Pseudomonas mendocina ymp	5107408
YP_001188572.1	CDS	Pmen_3086	NC_009439.1	3410838	3411218	D	hypothetical protein	3410838..3411218	Pseudomonas mendocina ymp	5107409
YP_001188573.1	CDS	Pmen_3087	NC_009439.1	3411278	3411805	D	PFAM: GCN5-related N-acetyltransferase; gentamicin 3'-N-acetyltransferase	3411278..3411805	Pseudomonas mendocina ymp	5107410
YP_001188574.1	CDS	Pmen_3088	NC_009439.1	3411886	3412278	D	hypothetical protein	3411886..3412278	Pseudomonas mendocina ymp	5107411
YP_001188575.1	CDS	Pmen_3089	NC_009439.1	3412432	3413274	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	3412432..3413274	Pseudomonas mendocina ymp	5107412
YP_001188576.1	CDS	Pmen_3090	NC_009439.1	3413433	3413816	D	hypothetical protein	3413433..3413816	Pseudomonas mendocina ymp	5107413
YP_001188577.1	CDS	Pmen_3091	NC_009439.1	3414000	3416483	D	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase	3414000..3416483	Pseudomonas mendocina ymp	5107414
YP_001188578.1	CDS	Pmen_3092	NC_009439.1	3416692	3417405	D	hypothetical protein	3416692..3417405	Pseudomonas mendocina ymp	5107415
YP_001188579.1	CDS	Pmen_3093	NC_009439.1	3417570	3419255	R	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase	complement(3417570..3419255)	Pseudomonas mendocina ymp	5107416
YP_001188580.1	CDS	Pmen_3094	NC_009439.1	3419698	3421110	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin	3419698..3421110	Pseudomonas mendocina ymp	5107417
YP_001188581.1	CDS	Pmen_3095	NC_009439.1	3421308	3422783	D	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator	3421308..3422783	Pseudomonas mendocina ymp	5107418
YP_001188582.1	CDS	Pmen_3096	NC_009439.1	3423009	3424181	D	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; hypothetical protein	3423009..3424181	Pseudomonas mendocina ymp	5107419
YP_001188583.1	CDS	Pmen_3097	NC_009439.1	3424185	3424787	R	PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; SH3 type 3 domain-containing protein	complement(3424185..3424787)	Pseudomonas mendocina ymp	5107420
YP_001188584.1	CDS	Pmen_3098	NC_009439.1	3425060	3426421	R	PFAM: EAL domain protein; diguanylate phosphodiesterase	complement(3425060..3426421)	Pseudomonas mendocina ymp	5107421
YP_001188585.1	CDS	Pmen_3099	NC_009439.1	3426458	3427387	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(3426458..3427387)	Pseudomonas mendocina ymp	5107422
YP_001188586.1	CDS	Pmen_3100	NC_009439.1	3427489	3428352	D	PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein	3427489..3428352	Pseudomonas mendocina ymp	5107423
YP_001188587.1	CDS	Pmen_3101	NC_009439.1	3428704	3430482	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	3428704..3430482	Pseudomonas mendocina ymp	5107424
YP_001188588.1	CDS	Pmen_3102	NC_009439.1	3430619	3431164	D	hypothetical protein	3430619..3431164	Pseudomonas mendocina ymp	5107425
YP_001188589.1	CDS	Pmen_3103	NC_009439.1	3431173	3431706	D	hypothetical protein	3431173..3431706	Pseudomonas mendocina ymp	5107426
YP_001188590.1	CDS	Pmen_3104	NC_009439.1	3431703	3432413	D	PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR	3431703..3432413	Pseudomonas mendocina ymp	5107427
YP_001188591.1	CDS	Pmen_3105	NC_009439.1	3432421	3432834	R	hypothetical protein	complement(3432421..3432834)	Pseudomonas mendocina ymp	5107428
YP_001188592.1	CDS	Pmen_3106	NC_009439.1	3432938	3433615	D	hypothetical protein	3432938..3433615	Pseudomonas mendocina ymp	5107429
YP_001188593.1	CDS	Pmen_3107	NC_009439.1	3433664	3434443	R	PFAM: EAL domain protein; diguanylate phosphodiesterase	complement(3433664..3434443)	Pseudomonas mendocina ymp	5107430
YP_001188594.1	CDS	acsA	NC_009439.1	3434745	3436706	R	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase	complement(3434745..3436706)	Pseudomonas mendocina ymp	5107282
YP_001188595.1	CDS	Pmen_3110	NC_009439.1	3437083	3437643	D	PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase	3437083..3437643	Pseudomonas mendocina ymp	5107432
YP_001188596.1	CDS	Pmen_3111	NC_009439.1	3437801	3439354	R	PFAM: sigma-54 factor, interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: PAS domain containing protein; AAA ATPase; transcriptional regulator TyrR	complement(3437801..3439354)	Pseudomonas mendocina ymp	5107433
YP_001188597.1	CDS	phhA	NC_009439.1	3439608	3440393	D	phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase	3439608..3440393	Pseudomonas mendocina ymp	5107434
YP_001188598.1	CDS	phhB	NC_009439.1	3440515	3440868	D	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase	3440515..3440868	Pseudomonas mendocina ymp	5107435
YP_001188599.1	CDS	Pmen_3114	NC_009439.1	3440865	3442061	D	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase	3440865..3442061	Pseudomonas mendocina ymp	5107436
YP_001188600.1	CDS	Pmen_3115	NC_009439.1	3442233	3443147	D	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein	3442233..3443147	Pseudomonas mendocina ymp	5107437
YP_001188601.1	CDS	Pmen_3116	NC_009439.1	3443157	3444317	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	3443157..3444317	Pseudomonas mendocina ymp	5107438
YP_001188602.1	CDS	Pmen_3117	NC_009439.1	3444314	3445252	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	3444314..3445252	Pseudomonas mendocina ymp	5107439
YP_001188603.1	CDS	Pmen_3118	NC_009439.1	3445252	3445980	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	3445252..3445980	Pseudomonas mendocina ymp	5107440
YP_001188604.1	CDS	Pmen_3119	NC_009439.1	3446175	3447437	D	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	3446175..3447437	Pseudomonas mendocina ymp	5107441
YP_001188605.1	CDS	Pmen_3120	NC_009439.1	3447528	3449786	D	TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; glucosylglycerol-phosphate synthase; PFAM: glycosyl transferase, family 20; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; glucosylglycerol-phosphate synthase	3447528..3449786	Pseudomonas mendocina ymp	5107442
YP_001188606.1	CDS	Pmen_3121	NC_009439.1	3450513	3450839	R	hypothetical protein	complement(3450513..3450839)	Pseudomonas mendocina ymp	5107443
YP_001188607.1	CDS	Pmen_3122	NC_009439.1	3450976	3451395	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase	complement(3450976..3451395)	Pseudomonas mendocina ymp	5107444
YP_001188608.1	CDS	Pmen_3123	NC_009439.1	3451409	3451834	R	PFAM: DGPFAETKE family protein; DGPFAETKE family protein	complement(3451409..3451834)	Pseudomonas mendocina ymp	5107445
YP_001188609.1	CDS	Pmen_3124	NC_009439.1	3451963	3452706	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(3451963..3452706)	Pseudomonas mendocina ymp	5107446
YP_001188610.1	CDS	Pmen_3125	NC_009439.1	3452905	3454302	R	hypothetical protein	complement(3452905..3454302)	Pseudomonas mendocina ymp	5107447
YP_001188611.1	CDS	Pmen_3126	NC_009439.1	3454299	3455210	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(3454299..3455210)	Pseudomonas mendocina ymp	5107448
YP_001188612.1	CDS	Pmen_3127	NC_009439.1	3455340	3456455	R	with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein	complement(3455340..3456455)	Pseudomonas mendocina ymp	5107449
YP_001188613.1	CDS	Pmen_3128	NC_009439.1	3456544	3458172	R	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase	complement(3456544..3458172)	Pseudomonas mendocina ymp	5107450
YP_001188614.1	CDS	Pmen_3129	NC_009439.1	3458457	3461201	R	Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT	complement(3458457..3461201)	Pseudomonas mendocina ymp	5107451
YP_001188615.1	CDS	malG	NC_009439.1	3461347	3462237	R	with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease	complement(3461347..3462237)	Pseudomonas mendocina ymp	5107452
YP_001188616.1	CDS	malF	NC_009439.1	3462248	3463810	R	with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein	complement(3462248..3463810)	Pseudomonas mendocina ymp	5107453
YP_001188617.1	CDS	malE	NC_009439.1	3463872	3465059	R	functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter periplasmic protein	complement(3463872..3465059)	Pseudomonas mendocina ymp	5107454
YP_001188618.1	CDS	malS	NC_009439.1	3465317	3467380	D	periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; periplasmic alpha-amylase	3465317..3467380	Pseudomonas mendocina ymp	5107455
YP_001188619.1	CDS	Pmen_3134	NC_009439.1	3467577	3468656	D	hypothetical protein	3467577..3468656	Pseudomonas mendocina ymp	5107456
YP_001188620.1	CDS	Pmen_3135	NC_009439.1	3468765	3469295	R	PFAM: protein of unknown function DUF1568; hypothetical protein	complement(3468765..3469295)	Pseudomonas mendocina ymp	5107457
YP_001188621.1	CDS	Pmen_3136	NC_009439.1	3469445	3471112	R	PFAM: glycoside hydrolase, starch-binding; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glucan 1,4-alpha-maltohexaosidase	complement(3469445..3471112)	Pseudomonas mendocina ymp	5107458
YP_001188622.1	CDS	lamB	NC_009439.1	3471482	3472753	D	porin involved in the transport of maltose and maltodextrins; maltoporin	3471482..3472753	Pseudomonas mendocina ymp	5107459
YP_001188623.1	CDS	Pmen_3138	NC_009439.1	3472879	3473802	D	PFAM: Maltose operon periplasmic; maltose operon periplasmic	3472879..3473802	Pseudomonas mendocina ymp	5107460
YP_001188624.1	CDS	Pmen_3139	NC_009439.1	3473919	3475841	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(3473919..3475841)	Pseudomonas mendocina ymp	5107461
YP_001188625.1	CDS	Pmen_3140	NC_009439.1	3476031	3476894	R	PFAM: aldo/keto reductase; aldo/keto reductase	complement(3476031..3476894)	Pseudomonas mendocina ymp	5107462
YP_001188626.1	CDS	Pmen_3141	NC_009439.1	3477009	3477680	R	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	complement(3477009..3477680)	Pseudomonas mendocina ymp	5107463
YP_001188627.1	CDS	Pmen_3142	NC_009439.1	3477682	3478395	R	TIGRFAM: 6-phosphogluconolactonase; 6-phosphogluconolactonase	complement(3477682..3478395)	Pseudomonas mendocina ymp	5107464
YP_001188628.1	CDS	Pmen_3143	NC_009439.1	3478382	3479848	R	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase	complement(3478382..3479848)	Pseudomonas mendocina ymp	5106472
YP_001188629.1	CDS	Pmen_3144	NC_009439.1	3480051	3480920	D	Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR	3480051..3480920	Pseudomonas mendocina ymp	5106473
YP_001188630.1	CDS	Pmen_3145	NC_009439.1	3481108	3482055	D	PFAM: Bile acid:sodium symporter; bile acid:sodium symporter	3481108..3482055	Pseudomonas mendocina ymp	5106474
YP_001188631.1	CDS	Pmen_3146	NC_009439.1	3482200	3482514	D	PFAM: small multidrug resistance protein; small multidrug resistance protein	3482200..3482514	Pseudomonas mendocina ymp	5106475
YP_001188632.1	CDS	Pmen_3147	NC_009439.1	3482598	3484472	R	PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; phospholipid/glycerol acyltransferase	complement(3482598..3484472)	Pseudomonas mendocina ymp	5106476
YP_001188633.1	CDS	Pmen_3148	NC_009439.1	3485148	3485852	D	PFAM: 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase	3485148..3485852	Pseudomonas mendocina ymp	5106477
YP_001188634.1	CDS	Pmen_3149	NC_009439.1	3486042	3487682	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	complement(3486042..3487682)	Pseudomonas mendocina ymp	5106478
YP_001188635.1	CDS	Pmen_3150	NC_009439.1	3487660	3488409	R	PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	complement(3487660..3488409)	Pseudomonas mendocina ymp	5106479
YP_001188636.1	CDS	Pmen_3151	NC_009439.1	3489275	3492181	D	Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha	3489275..3492181	Pseudomonas mendocina ymp	5106480
YP_001188637.1	CDS	Pmen_3152	NC_009439.1	3492649	3493899	D	Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta	3492649..3493899	Pseudomonas mendocina ymp	5106481
YP_001188638.1	CDS	Pmen_3153	NC_009439.1	3494009	3495322	D	hypothetical protein	3494009..3495322	Pseudomonas mendocina ymp	5106482
YP_001188639.1	CDS	Pmen_3154	NC_009439.1	3496507	3496683	D	hypothetical protein	3496507..3496683	Pseudomonas mendocina ymp	5106483
YP_001188640.1	CDS	Pmen_3155	NC_009439.1	3497006	3498067	D	PFAM: aldo/keto reductase; aldo/keto reductase	3497006..3498067	Pseudomonas mendocina ymp	5106484
YP_001188641.1	CDS	Pmen_3156	NC_009439.1	3498087	3498971	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(3498087..3498971)	Pseudomonas mendocina ymp	5106485
YP_001188642.1	CDS	Pmen_3157	NC_009439.1	3499124	3499315	R	PFAM: protein of unknown function DUF1289; hypothetical protein	complement(3499124..3499315)	Pseudomonas mendocina ymp	5106486
YP_001188643.1	CDS	Pmen_3158	NC_009439.1	3499299	3499634	R	hypothetical protein	complement(3499299..3499634)	Pseudomonas mendocina ymp	5106487
YP_001188644.1	CDS	Pmen_3159	NC_009439.1	3499859	3500758	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(3499859..3500758)	Pseudomonas mendocina ymp	5106488
YP_001188645.1	CDS	Pmen_3160	NC_009439.1	3500879	3501580	D	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone)	3500879..3501580	Pseudomonas mendocina ymp	5106489
YP_001188646.1	CDS	Pmen_3161	NC_009439.1	3501616	3502359	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase	complement(3501616..3502359)	Pseudomonas mendocina ymp	5106490
YP_001188647.1	CDS	Pmen_3162	NC_009439.1	3502644	3503084	D	hypothetical protein	3502644..3503084	Pseudomonas mendocina ymp	5106491
YP_001188648.1	CDS	Pmen_3163	NC_009439.1	3503299	3503646	D	PFAM: protein of unknown function DUF861, cupin_3; hypothetical protein	3503299..3503646	Pseudomonas mendocina ymp	5106492
YP_001188649.1	CDS	Pmen_3164	NC_009439.1	3503815	3504291	D	PFAM: proteinase inhibitor I11, ecotin; proteinase inhibitor I11, ecotin	3503815..3504291	Pseudomonas mendocina ymp	5106493
YP_001188650.1	CDS	Pmen_3165	NC_009439.1	3504406	3505050	R	TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; hypothetical protein	complement(3504406..3505050)	Pseudomonas mendocina ymp	5106494
YP_001188651.1	CDS	Pmen_3166	NC_009439.1	3505208	3507217	D	PFAM: peptidase U32; peptidase U32	3505208..3507217	Pseudomonas mendocina ymp	5106495
YP_001188652.1	CDS	Pmen_3167	NC_009439.1	3507314	3507610	R	PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase	complement(3507314..3507610)	Pseudomonas mendocina ymp	5106496
YP_001188653.1	CDS	Pmen_3168	NC_009439.1	3507765	3508352	D	PFAM: NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone)	3507765..3508352	Pseudomonas mendocina ymp	5106497
YP_001188654.1	CDS	Pmen_3169	NC_009439.1	3508359	3509198	R	PFAM: Allergen V5/Tpx-1 family protein; Allergen V5/Tpx-1 family protein	complement(3508359..3509198)	Pseudomonas mendocina ymp	5106498
YP_001188655.1	CDS	Pmen_3170	NC_009439.1	3509407	3509772	D	hypothetical protein	3509407..3509772	Pseudomonas mendocina ymp	5106499
YP_001188656.1	CDS	Pmen_3171	NC_009439.1	3509926	3510207	D	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase	3509926..3510207	Pseudomonas mendocina ymp	5106500
YP_001188657.1	CDS	Pmen_3172	NC_009439.1	3510286	3511842	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	3510286..3511842	Pseudomonas mendocina ymp	5106501
YP_001188658.1	CDS	Pmen_3173	NC_009439.1	3511866	3512759	R	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	complement(3511866..3512759)	Pseudomonas mendocina ymp	5106502
YP_001188659.1	CDS	Pmen_3174	NC_009439.1	3512937	3513671	D	PFAM: protein of unknown function DUF81; hypothetical protein	3512937..3513671	Pseudomonas mendocina ymp	5106503
YP_001188660.1	CDS	Pmen_3175	NC_009439.1	3513796	3514839	R	PFAM: protein of unknown function DUF1176; hypothetical protein	complement(3513796..3514839)	Pseudomonas mendocina ymp	5106504
YP_001188661.1	CDS	Pmen_3176	NC_009439.1	3514908	3515618	R	PFAM: oxidoreductase domain protein; NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; NADP oxidoreductase, coenzyme F420-dependent	complement(3514908..3515618)	Pseudomonas mendocina ymp	5106505
YP_001188662.1	CDS	Pmen_3177	NC_009439.1	3515846	3515977	D	hypothetical protein	3515846..3515977	Pseudomonas mendocina ymp	5106506
YP_001188663.1	CDS	Pmen_3178	NC_009439.1	3516149	3516850	D	PFAM: protein of unknown function DUF28; hypothetical protein	3516149..3516850	Pseudomonas mendocina ymp	5106507
YP_001188664.1	CDS	Pmen_3179	NC_009439.1	3516893	3517282	D	PFAM: NUDIX hydrolase; NUDIX hydrolase	3516893..3517282	Pseudomonas mendocina ymp	5106508
YP_001188665.1	CDS	Pmen_3180	NC_009439.1	3517451	3517780	D	hypothetical protein	3517451..3517780	Pseudomonas mendocina ymp	5106509
YP_001188666.1	CDS	Pmen_3181	NC_009439.1	3517890	3518798	R	PFAM: Forkhead-associated protein; FHA domain-containing protein	complement(3517890..3518798)	Pseudomonas mendocina ymp	5106510
YP_001188667.1	CDS	Pmen_3182	NC_009439.1	3518814	3520298	R	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase	complement(3518814..3520298)	Pseudomonas mendocina ymp	5106511
YP_001188668.1	CDS	Pmen_3183	NC_009439.1	3520315	3521139	R	PFAM: protein phosphatase 2C domain protein; protein phosphatase 2C domain-containing protein	complement(3520315..3521139)	Pseudomonas mendocina ymp	5106512
YP_001188669.1	CDS	Pmen_3184	NC_009439.1	3521245	3521655	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	3521245..3521655	Pseudomonas mendocina ymp	5106513
YP_001188670.1	CDS	Pmen_3185	NC_009439.1	3521761	3522804	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	3521761..3522804	Pseudomonas mendocina ymp	5106514
YP_001188671.1	CDS	Pmen_3186	NC_009439.1	3522808	3523134	R	hypothetical protein	complement(3522808..3523134)	Pseudomonas mendocina ymp	5106515
YP_001188672.1	CDS	Pmen_3187	NC_009439.1	3523400	3524242	R	SMART: RNA binding S1 domain protein; GntR family transcriptional regulator	complement(3523400..3524242)	Pseudomonas mendocina ymp	5107283
YP_001188673.1	CDS	Pmen_3188	NC_009439.1	3524483	3524674	D	hypothetical protein	3524483..3524674	Pseudomonas mendocina ymp	5106517
YP_001188674.1	CDS	Pmen_3189	NC_009439.1	3524774	3525919	R	PFAM: glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase	complement(3524774..3525919)	Pseudomonas mendocina ymp	5106518
YP_001188675.1	CDS	Pmen_3190	NC_009439.1	3526003	3526683	R	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(3526003..3526683)	Pseudomonas mendocina ymp	5106519
YP_001188676.1	CDS	Pmen_3191	NC_009439.1	3526871	3527848	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	3526871..3527848	Pseudomonas mendocina ymp	5106520
YP_001188677.1	CDS	Pmen_3192	NC_009439.1	3528073	3529401	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(3528073..3529401)	Pseudomonas mendocina ymp	5106521
YP_001188678.1	CDS	Pmen_3193	NC_009439.1	3529679	3531847	D	hypothetical protein	3529679..3531847	Pseudomonas mendocina ymp	5106522
YP_001188679.1	CDS	Pmen_3194	NC_009439.1	3531902	3534082	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; diguanylate cyclase/phosphodiesterase	3531902..3534082	Pseudomonas mendocina ymp	5106523
YP_001188680.1	CDS	Pmen_3195	NC_009439.1	3534370	3535161	R	PFAM: Xylose isomerase domain protein TIM barrel; hydroxypyruvate isomerase	complement(3534370..3535161)	Pseudomonas mendocina ymp	5106524
YP_001188681.1	CDS	Pmen_3196	NC_009439.1	3535152	3536042	R	PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase	complement(3535152..3536042)	Pseudomonas mendocina ymp	5106525
YP_001188682.1	CDS	Pmen_3197	NC_009439.1	3536178	3537029	D	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein	3536178..3537029	Pseudomonas mendocina ymp	5106526
YP_001188683.1	CDS	Pmen_3198	NC_009439.1	3537026	3537826	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	3537026..3537826	Pseudomonas mendocina ymp	5106527
YP_001188684.1	CDS	Pmen_3199	NC_009439.1	3537820	3538647	D	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit	3537820..3538647	Pseudomonas mendocina ymp	5106528
YP_001188685.1	CDS	Pmen_3200	NC_009439.1	3538644	3539405	D	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit	3538644..3539405	Pseudomonas mendocina ymp	5106529
YP_001188686.1	CDS	Pmen_3201	NC_009439.1	3539518	3540066	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	complement(3539518..3540066)	Pseudomonas mendocina ymp	5106530
YP_001188687.1	CDS	Pmen_3202	NC_009439.1	3540433	3541935	R	PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase	complement(3540433..3541935)	Pseudomonas mendocina ymp	5106531
YP_001188688.1	CDS	Pmen_3203	NC_009439.1	3542103	3542675	R	hypothetical protein	complement(3542103..3542675)	Pseudomonas mendocina ymp	5106532
YP_001188689.1	CDS	Pmen_3204	NC_009439.1	3542972	3544684	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; 4-vinyl reductase, 4VR; Activator of aromatic catabolism; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Fis family transcriptional regulator	complement(3542972..3544684)	Pseudomonas mendocina ymp	5106533
YP_001188690.1	CDS	Pmen_3205	NC_009439.1	3545313	3546050	R	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	complement(3545313..3546050)	Pseudomonas mendocina ymp	5106534
YP_001188691.1	CDS	Pmen_3206	NC_009439.1	3546184	3547113	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(3546184..3547113)	Pseudomonas mendocina ymp	5106535
YP_001188692.1	CDS	Pmen_3207	NC_009439.1	3547409	3547699	R	hypothetical protein	complement(3547409..3547699)	Pseudomonas mendocina ymp	5106536
YP_001188693.1	CDS	Pmen_3208	NC_009439.1	3547696	3548514	R	PFAM: NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone)	complement(3547696..3548514)	Pseudomonas mendocina ymp	5106537
YP_001188694.1	CDS	Pmen_3209	NC_009439.1	3548604	3549542	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	3548604..3549542	Pseudomonas mendocina ymp	5106538
YP_001188695.1	CDS	Pmen_3210	NC_009439.1	3549764	3551386	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(3549764..3551386)	Pseudomonas mendocina ymp	5106539
YP_001188696.1	CDS	Pmen_3211	NC_009439.1	3551449	3552240	D	XRE family transcriptional regulator	3551449..3552240	Pseudomonas mendocina ymp	5106540
YP_001188697.1	CDS	Pmen_3212	NC_009439.1	3552363	3552797	R	PFAM: glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein	complement(3552363..3552797)	Pseudomonas mendocina ymp	5106541
YP_001188698.1	CDS	Pmen_3213	NC_009439.1	3552906	3553790	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	3552906..3553790	Pseudomonas mendocina ymp	5106542
YP_001188699.1	CDS	Pmen_3214	NC_009439.1	3553849	3554721	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; AraC family transcriptional regulator	complement(3553849..3554721)	Pseudomonas mendocina ymp	5106543
YP_001188700.1	CDS	Pmen_3215	NC_009439.1	3554859	3555614	D	PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	3554859..3555614	Pseudomonas mendocina ymp	5106544
YP_001188701.1	CDS	Pmen_3216	NC_009439.1	3555936	3556787	D	PFAM: Ku domain protein; Ku domain-containing protein	3555936..3556787	Pseudomonas mendocina ymp	5106545
YP_001188702.1	CDS	ligD	NC_009439.1	3556803	3559316	D	catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase	3556803..3559316	Pseudomonas mendocina ymp	5106546
YP_001188703.1	CDS	Pmen_3218	NC_009439.1	3559506	3561161	R	PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(3559506..3561161)	Pseudomonas mendocina ymp	5106547
YP_001188704.1	CDS	Pmen_3219	NC_009439.1	3561592	3562035	D	PFAM: regulatory protein, MerR; MerR family transcriptional regulator	3561592..3562035	Pseudomonas mendocina ymp	5106548
YP_001188705.1	CDS	Pmen_3220	NC_009439.1	3562156	3563208	R	hypothetical protein	complement(3562156..3563208)	Pseudomonas mendocina ymp	5106549
YP_001188706.1	CDS	Pmen_3221	NC_009439.1	3563404	3564639	D	PFAM: NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase	3563404..3564639	Pseudomonas mendocina ymp	5106550
YP_001188707.1	CDS	Pmen_3222	NC_009439.1	3564796	3564969	D	hypothetical protein	3564796..3564969	Pseudomonas mendocina ymp	5106729
YP_001188708.1	CDS	Pmen_3223	NC_009439.1	3565272	3567317	R	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related, FMN-binding; oxidoreductase FAD-binding subunit	complement(3565272..3567317)	Pseudomonas mendocina ymp	5106730
YP_001188709.1	CDS	Pmen_3224	NC_009439.1	3567514	3568140	R	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; glutathione S-transferase domain-containing protein	complement(3567514..3568140)	Pseudomonas mendocina ymp	5106731
YP_001188710.1	CDS	Pmen_3225	NC_009439.1	3568277	3569167	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(3568277..3569167)	Pseudomonas mendocina ymp	5106732
YP_001188711.1	CDS	Pmen_3226	NC_009439.1	3569164	3570087	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(3569164..3570087)	Pseudomonas mendocina ymp	5106733
YP_001188712.1	CDS	Pmen_3227	NC_009439.1	3570131	3570751	R	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	complement(3570131..3570751)	Pseudomonas mendocina ymp	5106734
YP_001188713.1	CDS	Pmen_3228	NC_009439.1	3570889	3572076	R	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase	complement(3570889..3572076)	Pseudomonas mendocina ymp	5106735
YP_001188714.1	CDS	Pmen_3229	NC_009439.1	3572261	3573751	R	PFAM: protein of unknown function DUF344; hypothetical protein	complement(3572261..3573751)	Pseudomonas mendocina ymp	5106736
YP_001188715.1	CDS	mnmC	NC_009439.1	3573898	3575871	D	catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase	3573898..3575871	Pseudomonas mendocina ymp	5106737
YP_001188716.1	CDS	Pmen_3231	NC_009439.1	3575893	3577956	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor	complement(3575893..3577956)	Pseudomonas mendocina ymp	5106738
YP_001188717.1	CDS	Pmen_3232	NC_009439.1	3578088	3578993	R	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	complement(3578088..3578993)	Pseudomonas mendocina ymp	5106739
YP_001188718.1	CDS	Pmen_3233	NC_009439.1	3579143	3581029	D	PFAM: UvrD/REP helicase; UvrD/REP helicase	3579143..3581029	Pseudomonas mendocina ymp	5106740
YP_001188719.1	CDS	Pmen_3234	NC_009439.1	3581261	3581794	R	PFAM: cytochrome B561; cytochrome B561	complement(3581261..3581794)	Pseudomonas mendocina ymp	5106741
YP_001188720.1	CDS	Pmen_3235	NC_009439.1	3581987	3584524	R	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH	complement(3581987..3584524)	Pseudomonas mendocina ymp	5106742
YP_001188721.1	CDS	mdoG	NC_009439.1	3584517	3586052	R	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G	complement(3584517..3586052)	Pseudomonas mendocina ymp	5106743
YP_001188722.1	CDS	Pmen_3237	NC_009439.1	3586312	3588618	R	PFAM: glycoside hydrolase, family 3 domain protein; glycoside hydrolase family protein	complement(3586312..3588618)	Pseudomonas mendocina ymp	5106744
YP_001188723.1	CDS	Pmen_3238	NC_009439.1	3588825	3589697	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	3588825..3589697	Pseudomonas mendocina ymp	5106745
YP_001188724.1	CDS	Pmen_3239	NC_009439.1	3589845	3592475	D	PFAM: SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SMART: DEAD-like helicases-like; non-specific serine/threonine protein kinase	3589845..3592475	Pseudomonas mendocina ymp	5106746
YP_001188725.1	CDS	Pmen_3240	NC_009439.1	3592519	3593013	R	PFAM: phosphate-starvation-inducible E; phosphate-starvation-inducible E	complement(3592519..3593013)	Pseudomonas mendocina ymp	5106747
YP_001188726.1	CDS	Pmen_3241	NC_009439.1	3593300	3593563	D	PFAM: YebG family protein; hypothetical protein	3593300..3593563	Pseudomonas mendocina ymp	5106748
YP_001188727.1	CDS	Pmen_3242	NC_009439.1	3593734	3593985	R	hypothetical protein	complement(3593734..3593985)	Pseudomonas mendocina ymp	5106749
YP_001188728.1	CDS	Pmen_3243	NC_009439.1	3594292	3594696	D	PFAM: protein of unknown function DUF488; hypothetical protein	3594292..3594696	Pseudomonas mendocina ymp	5106750
YP_001188729.1	CDS	Pmen_3244	NC_009439.1	3594983	3595849	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	3594983..3595849	Pseudomonas mendocina ymp	5106751
YP_001188730.1	CDS	Pmen_3245	NC_009439.1	3595877	3596983	R	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2	complement(3595877..3596983)	Pseudomonas mendocina ymp	5106752
YP_001188731.1	CDS	Pmen_3246	NC_009439.1	3597053	3598057	R	PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region	complement(3597053..3598057)	Pseudomonas mendocina ymp	5106753
YP_001188732.1	CDS	Pmen_3247	NC_009439.1	3598050	3599138	R	PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase	complement(3598050..3599138)	Pseudomonas mendocina ymp	5106754
YP_001188733.1	CDS	Pmen_3248	NC_009439.1	3599239	3600261	R	PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase	complement(3599239..3600261)	Pseudomonas mendocina ymp	5106755
YP_001188734.1	CDS	Pmen_3249	NC_009439.1	3600362	3601165	D	hypothetical protein	3600362..3601165	Pseudomonas mendocina ymp	5106756
YP_001188735.1	CDS	Pmen_3250	NC_009439.1	3601322	3601993	D	hypothetical protein	3601322..3601993	Pseudomonas mendocina ymp	5106757
YP_001188736.1	CDS	Pmen_3251	NC_009439.1	3602074	3602427	D	hypothetical protein	3602074..3602427	Pseudomonas mendocina ymp	5106758
YP_001188737.1	CDS	Pmen_3252	NC_009439.1	3602431	3603390	D	PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein	3602431..3603390	Pseudomonas mendocina ymp	5106759
YP_001188738.1	CDS	Pmen_3253	NC_009439.1	3603452	3603820	D	hypothetical protein	3603452..3603820	Pseudomonas mendocina ymp	5106760
YP_001188739.1	CDS	potE	NC_009439.1	3603871	3605199	D	catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter	3603871..3605199	Pseudomonas mendocina ymp	5106761
YP_001188740.1	CDS	Pmen_3255	NC_009439.1	3605211	3606104	D	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	3605211..3606104	Pseudomonas mendocina ymp	5106762
YP_001188741.1	CDS	Pmen_3256	NC_009439.1	3606113	3606469	R	PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ	complement(3606113..3606469)	Pseudomonas mendocina ymp	5106763
YP_001188742.1	CDS	Pmen_3257	NC_009439.1	3606529	3606951	R	hypothetical protein	complement(3606529..3606951)	Pseudomonas mendocina ymp	5106764
YP_001188743.1	CDS	Pmen_3258	NC_009439.1	3607024	3607398	R	hypothetical protein	complement(3607024..3607398)	Pseudomonas mendocina ymp	5106765
YP_001188744.1	CDS	Pmen_3259	NC_009439.1	3607551	3608357	D	hypothetical protein	3607551..3608357	Pseudomonas mendocina ymp	5106766
YP_001188745.1	CDS	Pmen_3260	NC_009439.1	3608426	3609334	D	PFAM: UspA domain protein; UspA domain-containing protein	3608426..3609334	Pseudomonas mendocina ymp	5106767
YP_001188746.1	CDS	Pmen_3261	NC_009439.1	3609407	3610858	D	catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase	3609407..3610858	Pseudomonas mendocina ymp	5106768
YP_001188747.1	CDS	Pmen_3262	NC_009439.1	3611090	3611863	R	PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase	complement(3611090..3611863)	Pseudomonas mendocina ymp	5106769
YP_001188748.1	CDS	Pmen_3263	NC_009439.1	3611955	3612893	R	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; hypothetical protein	complement(3611955..3612893)	Pseudomonas mendocina ymp	5106770
YP_001188749.1	CDS	Pmen_3264	NC_009439.1	3612886	3614013	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	complement(3612886..3614013)	Pseudomonas mendocina ymp	5106771
YP_001188750.1	CDS	Pmen_3265	NC_009439.1	3614297	3615820	D	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; fumarase	3614297..3615820	Pseudomonas mendocina ymp	5106772
YP_001188751.1	CDS	Pmen_3266	NC_009439.1	3615882	3617222	R	catalyzes the formation of pyruvate from serine; D-serine dehydratase	complement(3615882..3617222)	Pseudomonas mendocina ymp	5106773
YP_001188752.1	CDS	Pmen_3267	NC_009439.1	3617362	3618036	D	PFAM: protein of unknown function DUF1028; hypothetical protein	3617362..3618036	Pseudomonas mendocina ymp	5106774
YP_001188753.1	CDS	Pmen_3268	NC_009439.1	3618327	3619661	D	beta-xylosidase-like protein	3618327..3619661	Pseudomonas mendocina ymp	5106775
YP_001188754.1	CDS	Pmen_3269	NC_009439.1	3619656	3620765	R	PFAM: AFG1-family ATPase; AFG1 family ATPase	complement(3619656..3620765)	Pseudomonas mendocina ymp	5106776
YP_001188755.1	CDS	Pmen_3270	NC_009439.1	3620771	3621655	R	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	complement(3620771..3621655)	Pseudomonas mendocina ymp	5106777
YP_001188756.1	CDS	Pmen_3271	NC_009439.1	3621652	3622242	R	hypothetical protein	complement(3621652..3622242)	Pseudomonas mendocina ymp	5106778
YP_001188757.1	CDS	Pmen_3272	NC_009439.1	3622355	3622756	D	PFAM: protein of unknown function DUF1486; hypothetical protein	3622355..3622756	Pseudomonas mendocina ymp	5106779
YP_001188758.1	CDS	Pmen_3273	NC_009439.1	3622962	3623264	R	related to arylsulfate sulfotransferase involved in siderophore biosynthesis; hypothetical protein	complement(3622962..3623264)	Pseudomonas mendocina ymp	5106780
YP_001188759.1	CDS	Pmen_3274	NC_009439.1	3623358	3623939	R	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; PfpI family intracellular peptidase	complement(3623358..3623939)	Pseudomonas mendocina ymp	5106781
YP_001188760.1	CDS	Pmen_3275	NC_009439.1	3624049	3624657	R	hypothetical protein	complement(3624049..3624657)	Pseudomonas mendocina ymp	5106782
YP_001188761.1	CDS	Pmen_3276	NC_009439.1	3624735	3625472	R	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(3624735..3625472)	Pseudomonas mendocina ymp	5106783
YP_001188762.1	CDS	Pmen_3277	NC_009439.1	3625599	3626510	R	PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	complement(3625599..3626510)	Pseudomonas mendocina ymp	5106784
YP_001188763.1	CDS	Pmen_3278	NC_009439.1	3626624	3626941	R	hypothetical protein	complement(3626624..3626941)	Pseudomonas mendocina ymp	5106785
YP_001188764.1	CDS	Pmen_3279	NC_009439.1	3627063	3627593	R	hypothetical protein	complement(3627063..3627593)	Pseudomonas mendocina ymp	5106786
YP_001188765.1	CDS	Pmen_3280	NC_009439.1	3627572	3628480	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(3627572..3628480)	Pseudomonas mendocina ymp	5106787
YP_001188766.1	CDS	Pmen_3281	NC_009439.1	3628477	3629262	R	PFAM: class II aldolase/adducin family protein; aldolase II superfamily protein	complement(3628477..3629262)	Pseudomonas mendocina ymp	5106788
YP_001188767.1	CDS	Pmen_3282	NC_009439.1	3629417	3629884	R	PFAM: protein of unknown function DUF985; hypothetical protein	complement(3629417..3629884)	Pseudomonas mendocina ymp	5106789
YP_001188768.1	CDS	Pmen_3283	NC_009439.1	3629886	3630335	R	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin	complement(3629886..3630335)	Pseudomonas mendocina ymp	5106790
YP_001188769.1	CDS	Pmen_3284	NC_009439.1	3630438	3630884	D	TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein	3630438..3630884	Pseudomonas mendocina ymp	5106791
YP_001188770.1	CDS	Pmen_3285	NC_009439.1	3630950	3631558	D	hypothetical protein	3630950..3631558	Pseudomonas mendocina ymp	5106792
YP_001188771.1	CDS	Pmen_3286	NC_009439.1	3631576	3632541	R	PFAM: regulatory protein, MerR; MerR family transcriptional regulator	complement(3631576..3632541)	Pseudomonas mendocina ymp	5106793
YP_001188772.1	CDS	Pmen_3287	NC_009439.1	3632856	3633422	D	PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase	3632856..3633422	Pseudomonas mendocina ymp	5106794
YP_001188773.1	CDS	Pmen_3288	NC_009439.1	3633738	3634448	D	PFAM: short-chain dehydrogenase/reductase SDR; short chain dehydrogenase	3633738..3634448	Pseudomonas mendocina ymp	5106795
YP_001188774.1	CDS	Pmen_3289	NC_009439.1	3634471	3635031	D	PFAM: GTP cyclohydrolase I; GTP cyclohydrolase	3634471..3635031	Pseudomonas mendocina ymp	5106796
YP_001188775.1	CDS	folX	NC_009439.1	3635031	3635402	D	catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase	3635031..3635402	Pseudomonas mendocina ymp	5106797
YP_001188776.1	CDS	Pmen_3291	NC_009439.1	3635478	3635771	D	PFAM: protein of unknown function DUF1244; hypothetical protein	3635478..3635771	Pseudomonas mendocina ymp	5106798
YP_001188777.1	CDS	Pmen_3292	NC_009439.1	3635768	3636109	D	hypothetical protein	3635768..3636109	Pseudomonas mendocina ymp	5106799
YP_001188778.1	CDS	Pmen_3293	NC_009439.1	3636272	3636859	D	PFAM: protein of unknown function DUF1089; hypothetical protein	3636272..3636859	Pseudomonas mendocina ymp	5106800
YP_001188779.1	CDS	Pmen_3294	NC_009439.1	3636949	3637278	R	PFAM: branched-chain amino acid transport; branched-chain amino acid transport	complement(3636949..3637278)	Pseudomonas mendocina ymp	5106801
YP_001188780.1	CDS	Pmen_3295	NC_009439.1	3637278	3638054	R	PFAM: AzlC family protein; AzlC family protein	complement(3637278..3638054)	Pseudomonas mendocina ymp	5106802
YP_001188781.1	CDS	Pmen_3296	NC_009439.1	3638170	3639582	D	PFAM: protein of unknown function DUF1111; hypothetical protein	3638170..3639582	Pseudomonas mendocina ymp	5106803
YP_001188782.1	CDS	Pmen_3297	NC_009439.1	3639593	3640654	D	periplasmic lipoprotein-like protein	3639593..3640654	Pseudomonas mendocina ymp	5106804
YP_001188783.1	CDS	Pmen_3298	NC_009439.1	3640657	3641760	D	PFAM: uncharacterised conserved protein UCP028101; hypothetical protein	3640657..3641760	Pseudomonas mendocina ymp	5106805
YP_001188784.1	CDS	Pmen_3299	NC_009439.1	3642189	3643016	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase	3642189..3643016	Pseudomonas mendocina ymp	5106806
YP_001188785.1	CDS	Pmen_3300	NC_009439.1	3643072	3643947	D	PFAM: SMP-30/Gluconolaconase/LRE domain protein; gluconolactonase	3643072..3643947	Pseudomonas mendocina ymp	5106807
YP_001188786.1	CDS	Pmen_3301	NC_009439.1	3644026	3645000	D	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	3644026..3645000	Pseudomonas mendocina ymp	5105774
YP_001188787.1	CDS	Pmen_3302	NC_009439.1	3645060	3645587	D	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ	3645060..3645587	Pseudomonas mendocina ymp	5105775
YP_001188788.1	CDS	Pmen_3303	NC_009439.1	3645587	3646867	D	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM	3645587..3646867	Pseudomonas mendocina ymp	5105776
YP_001188789.1	CDS	Pmen_3304	NC_009439.1	3646945	3647847	D	PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein	3646945..3647847	Pseudomonas mendocina ymp	5105777
YP_001188790.1	CDS	Pmen_3305	NC_009439.1	3647939	3648694	R	PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator	complement(3647939..3648694)	Pseudomonas mendocina ymp	5105778
YP_001188791.1	CDS	Pmen_3306	NC_009439.1	3648795	3649670	D	PFAM: Aldose 1-epimerase; aldose 1-epimerase	3648795..3649670	Pseudomonas mendocina ymp	5105779
YP_001188792.1	CDS	Pmen_3307	NC_009439.1	3649914	3650126	D	hypothetical protein	3649914..3650126	Pseudomonas mendocina ymp	5105780
YP_001188793.1	CDS	Pmen_3308	NC_009439.1	3650351	3651835	R	PFAM: protein of unknown function DUF853, NPT hydrolase putative; SMART: AAA ATPase; hypothetical protein	complement(3650351..3651835)	Pseudomonas mendocina ymp	5105781
YP_001188794.1	CDS	Pmen_3309	NC_009439.1	3651991	3653868	D	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	3651991..3653868	Pseudomonas mendocina ymp	5105782
YP_001188795.1	CDS	Pmen_3310	NC_009439.1	3653910	3654089	R	hypothetical protein	complement(3653910..3654089)	Pseudomonas mendocina ymp	5105783
YP_001188796.1	CDS	Pmen_3311	NC_009439.1	3654106	3654531	R	PFAM: CBS domain containing protein; hypothetical protein	complement(3654106..3654531)	Pseudomonas mendocina ymp	5105784
YP_001188797.1	CDS	purU	NC_009439.1	3654577	3655428	R	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase	complement(3654577..3655428)	Pseudomonas mendocina ymp	5105785
YP_001188798.1	CDS	Pmen_3313	NC_009439.1	3655688	3656092	D	H-NS family protein MvaT	3655688..3656092	Pseudomonas mendocina ymp	5105786
YP_001188799.1	CDS	sbcB	NC_009439.1	3656403	3657848	R	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I	complement(3656403..3657848)	Pseudomonas mendocina ymp	5105787
YP_001188800.1	CDS	Pmen_3315	NC_009439.1	3658025	3658783	D	PFAM: protein of unknown function DUF975; hypothetical protein	3658025..3658783	Pseudomonas mendocina ymp	5105788
YP_001188801.1	CDS	Pmen_3316	NC_009439.1	3658871	3659596	D	PFAM: RDD domain containing protein; RDD domain-containing protein	3658871..3659596	Pseudomonas mendocina ymp	5105789
YP_001188802.1	CDS	Pmen_3317	NC_009439.1	3659593	3660579	D	PFAM: protein of unknown function DUF95, transmembrane; hypothetical protein	3659593..3660579	Pseudomonas mendocina ymp	5105790
YP_001188803.1	CDS	Pmen_3318	NC_009439.1	3660566	3662143	D	hypothetical protein	3660566..3662143	Pseudomonas mendocina ymp	5105791
YP_001188804.1	CDS	Pmen_3319	NC_009439.1	3662140	3663321	D	hypothetical protein	3662140..3663321	Pseudomonas mendocina ymp	5105792
YP_001188805.1	CDS	Pmen_3320	NC_009439.1	3663318	3664361	D	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase	3663318..3664361	Pseudomonas mendocina ymp	5105793
YP_001188806.1	CDS	Pmen_3321	NC_009439.1	3664358	3665689	D	PFAM: protein of unknown function DUF58; hypothetical protein	3664358..3665689	Pseudomonas mendocina ymp	5105794
YP_001188807.1	CDS	Pmen_3322	NC_009439.1	3665897	3666478	D	PFAM: manganese and iron superoxide dismutase; superoxide dismutase	3665897..3666478	Pseudomonas mendocina ymp	5105795
YP_001188808.1	CDS	Pmen_3323	NC_009439.1	3666691	3668826	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase	3666691..3668826	Pseudomonas mendocina ymp	5105796
YP_001188809.1	CDS	Pmen_3324	NC_009439.1	3668988	3669893	R	hypothetical protein	complement(3668988..3669893)	Pseudomonas mendocina ymp	5105797
YP_001188810.1	CDS	Pmen_3325	NC_009439.1	3669895	3670467	R	PFAM: LemA family protein; LemA family protein	complement(3669895..3670467)	Pseudomonas mendocina ymp	5105798
YP_001188811.1	CDS	Pmen_3326	NC_009439.1	3670658	3671995	D	hypothetical protein	3670658..3671995	Pseudomonas mendocina ymp	5105799
YP_001188812.1	CDS	Pmen_3327	NC_009439.1	3672071	3672910	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; AraC family transcriptional regulator	complement(3672071..3672910)	Pseudomonas mendocina ymp	5105800
YP_001188813.1	CDS	Pmen_3328	NC_009439.1	3672913	3673482	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(3672913..3673482)	Pseudomonas mendocina ymp	5105801
YP_001188814.1	CDS	Pmen_3330	NC_009439.1	3677212	3678030	R	PFAM: regulatory protein, MerR; MerR family transcriptional regulator	complement(3677212..3678030)	Pseudomonas mendocina ymp	5107284
YP_001188815.1	CDS	Pmen_3331	NC_009439.1	3678241	3679263	D	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	3678241..3679263	Pseudomonas mendocina ymp	5105803
YP_001188816.1	CDS	Pmen_3332	NC_009439.1	3679314	3680789	R	PFAM: protein of unknown function DUF195; hypothetical protein	complement(3679314..3680789)	Pseudomonas mendocina ymp	5105804
YP_001188817.1	CDS	Pmen_3333	NC_009439.1	3680843	3681154	R	PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein	complement(3680843..3681154)	Pseudomonas mendocina ymp	5105805
YP_001188818.1	CDS	Pmen_3334	NC_009439.1	3681520	3682272	R	hypothetical protein	complement(3681520..3682272)	Pseudomonas mendocina ymp	5105806
YP_001188819.1	CDS	Pmen_3335	NC_009439.1	3682504	3682875	R	XRE family transcriptional regulator	complement(3682504..3682875)	Pseudomonas mendocina ymp	5105807
YP_001188820.1	CDS	Pmen_3336	NC_009439.1	3682981	3685563	D	hypothetical protein	3682981..3685563	Pseudomonas mendocina ymp	5105808
YP_001188821.1	CDS	Pmen_3337	NC_009439.1	3685568	3685759	D	hypothetical protein	3685568..3685759	Pseudomonas mendocina ymp	5105809
YP_001188822.1	CDS	Pmen_3338	NC_009439.1	3685771	3686109	D	PFAM: uncharacterised conserved protein UCP025560; hypothetical protein	3685771..3686109	Pseudomonas mendocina ymp	5105810
YP_001188823.1	CDS	Pmen_3339	NC_009439.1	3686222	3686548	R	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; glutaredoxin-like protein	complement(3686222..3686548)	Pseudomonas mendocina ymp	5105811
YP_001188824.1	CDS	Pmen_3340	NC_009439.1	3686673	3688781	R	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molydopterin dinucleotide-binding protein	complement(3686673..3688781)	Pseudomonas mendocina ymp	5105812
YP_001188825.1	CDS	Pmen_3341	NC_009439.1	3688927	3689358	R	hypothetical protein	complement(3688927..3689358)	Pseudomonas mendocina ymp	5105813
YP_001188826.1	CDS	Pmen_3342	NC_009439.1	3689694	3690614	D	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase	3689694..3690614	Pseudomonas mendocina ymp	5105814
YP_001188827.1	CDS	Pmen_3343	NC_009439.1	3690611	3691717	D	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein	3690611..3691717	Pseudomonas mendocina ymp	5105815
YP_001188828.1	CDS	Pmen_3344	NC_009439.1	3691719	3692525	R	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; PhzF family phenazine biosynthesis protein	complement(3691719..3692525)	Pseudomonas mendocina ymp	5105816
YP_001188829.1	CDS	Pmen_3345	NC_009439.1	3692687	3694174	R	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; glycerol kinase	complement(3692687..3694174)	Pseudomonas mendocina ymp	5105817
YP_001188830.1	CDS	Pmen_3346	NC_009439.1	3694231	3694701	R	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; ybaK/ebsC protein	complement(3694231..3694701)	Pseudomonas mendocina ymp	5105818
YP_001188831.1	CDS	Pmen_3347	NC_009439.1	3694796	3695554	D	PFAM: regulatory protein, DeoR; Bacterio-opsin activator, HTH domain protein; Helix-turn-helix, type 11 domain protein; DeoR family transcriptional regulator	3694796..3695554	Pseudomonas mendocina ymp	5105819
YP_001188832.1	CDS	glpD	NC_009439.1	3695751	3697280	D	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase	3695751..3697280	Pseudomonas mendocina ymp	5105820
YP_001188833.1	CDS	Pmen_3349	NC_009439.1	3697550	3698020	D	TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; bacterioferritin	3697550..3698020	Pseudomonas mendocina ymp	5105821
YP_001188834.1	CDS	Pmen_3350	NC_009439.1	3698077	3701151	R	PFAM: acriflavin resistance protein; acriflavin resistance protein	complement(3698077..3701151)	Pseudomonas mendocina ymp	5105822
YP_001188835.1	CDS	Pmen_3351	NC_009439.1	3701158	3702261	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	complement(3701158..3702261)	Pseudomonas mendocina ymp	5105823
YP_001188836.1	CDS	Pmen_3352	NC_009439.1	3702353	3702988	D	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	3702353..3702988	Pseudomonas mendocina ymp	5105824
YP_001188837.1	CDS	Pmen_3353	NC_009439.1	3703050	3703856	R	PFAM: protein of unknown function DUF548; hypothetical protein	complement(3703050..3703856)	Pseudomonas mendocina ymp	5105825
YP_001188838.1	CDS	Pmen_3354	NC_009439.1	3704089	3704790	R	PFAM: Extensin family protein; extensin family protein	complement(3704089..3704790)	Pseudomonas mendocina ymp	5105826
YP_001188839.1	CDS	Pmen_3355	NC_009439.1	3704803	3705672	R	PFAM: protein of unknown function DUF72; hypothetical protein	complement(3704803..3705672)	Pseudomonas mendocina ymp	5105827
YP_001188840.1	CDS	Pmen_3356	NC_009439.1	3705727	3706071	R	hypothetical protein	complement(3705727..3706071)	Pseudomonas mendocina ymp	5105828
YP_001188841.1	CDS	Pmen_3357	NC_009439.1	3706185	3706868	R	PFAM: peptidase M22, glycoprotease; peptidase M22, glycoprotease	complement(3706185..3706868)	Pseudomonas mendocina ymp	5105829
YP_001188842.1	CDS	Pmen_3358	NC_009439.1	3706984	3707757	R	TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B); 5'-nucleotidase	complement(3706984..3707757)	Pseudomonas mendocina ymp	5105830
YP_001188843.1	CDS	adk	NC_009439.1	3707937	3708584	R	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase	complement(3707937..3708584)	Pseudomonas mendocina ymp	5105831
YP_001188844.1	CDS	Pmen_3360	NC_009439.1	3708806	3711442	R	catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase	complement(3708806..3711442)	Pseudomonas mendocina ymp	5105832
YP_001188845.1	CDS	Pmen_3361	NC_009439.1	3711613	3711957	D	hypothetical protein	3711613..3711957	Pseudomonas mendocina ymp	5105833
YP_001188846.1	CDS	Pmen_3362	NC_009439.1	3712390	3712803	D	hypothetical protein	3712390..3712803	Pseudomonas mendocina ymp	5105834
YP_001188847.1	CDS	Pmen_3363	NC_009439.1	3712850	3713635	D	PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein	3712850..3713635	Pseudomonas mendocina ymp	5105835
YP_001188848.1	CDS	Pmen_3364	NC_009439.1	3713711	3714034	R	hypothetical protein	complement(3713711..3714034)	Pseudomonas mendocina ymp	5105836
YP_001188849.1	CDS	Pmen_3365	NC_009439.1	3714031	3714924	R	alpha/beta fold family hydrolase-like protein	complement(3714031..3714924)	Pseudomonas mendocina ymp	5105837
YP_001188850.1	CDS	Pmen_3366	NC_009439.1	3714914	3715660	R	PFAM: protein of unknown function DUF124; hypothetical protein	complement(3714914..3715660)	Pseudomonas mendocina ymp	5105838
YP_001188851.1	CDS	Pmen_3367	NC_009439.1	3715741	3717030	R	PFAM: protein of unknown function DUF1704; hypothetical protein	complement(3715741..3717030)	Pseudomonas mendocina ymp	5105839
YP_001188852.1	CDS	Pmen_3368	NC_009439.1	3717039	3717590	R	hypothetical protein	complement(3717039..3717590)	Pseudomonas mendocina ymp	5105840
YP_001188853.1	CDS	Pmen_3369	NC_009439.1	3717634	3718347	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(3717634..3718347)	Pseudomonas mendocina ymp	5105841
YP_001188854.1	CDS	lysS	NC_009439.1	3718517	3720034	R	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase	complement(3718517..3720034)	Pseudomonas mendocina ymp	5105842
YP_001188855.1	CDS	Pmen_3371	NC_009439.1	3720106	3721242	R	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 2	complement(3720106..3721242)	Pseudomonas mendocina ymp	5105843
YP_001188856.1	CDS	Pmen_3372	NC_009439.1	3721380	3722315	R	PFAM: Autotransporter beta- domain protein; autotransporter beta-domain-containing protein	complement(3721380..3722315)	Pseudomonas mendocina ymp	5105844
YP_001188857.1	CDS	Pmen_3373	NC_009439.1	3722395	3724056	R	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; glucose-methanol-choline oxidoreductase	complement(3722395..3724056)	Pseudomonas mendocina ymp	5105845
YP_001188858.1	CDS	Pmen_3374	NC_009439.1	3724236	3726023	D	TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; sulfate transporter	3724236..3726023	Pseudomonas mendocina ymp	5105846
YP_001188859.1	CDS	Pmen_3375	NC_009439.1	3726032	3726757	R	PFAM: protein of unknown function DUF533; hypothetical protein	complement(3726032..3726757)	Pseudomonas mendocina ymp	5105847
YP_001188860.1	CDS	Pmen_3376	NC_009439.1	3726923	3728632	R	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; exonuclease RecJ	complement(3726923..3728632)	Pseudomonas mendocina ymp	5105848
YP_001188861.1	CDS	Pmen_3377	NC_009439.1	3728680	3729324	R	putative transcriptional regulator	complement(3728680..3729324)	Pseudomonas mendocina ymp	5105849
YP_001188862.1	CDS	Pmen_3378	NC_009439.1	3729417	3730166	D	PFAM: LamB/YcsF family protein; LamB/YcsF family protein	3729417..3730166	Pseudomonas mendocina ymp	5105850
YP_001188863.1	CDS	Pmen_3379	NC_009439.1	3730163	3730867	D	PFAM: Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1	3730163..3730867	Pseudomonas mendocina ymp	5105851
YP_001188864.1	CDS	Pmen_3380	NC_009439.1	3730864	3731778	D	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; urea amidolyase-like protein	3730864..3731778	Pseudomonas mendocina ymp	5105852
YP_001188865.1	CDS	Pmen_3381	NC_009439.1	3731910	3733136	D	manganese transporter NRAMP	3731910..3733136	Pseudomonas mendocina ymp	5105853
YP_001188866.1	CDS	Pmen_3382	NC_009439.1	3733158	3733700	R	PFAM: YaeQ family protein; YaeQ family protein	complement(3733158..3733700)	Pseudomonas mendocina ymp	5105854
YP_001188867.1	CDS	Pmen_3383	NC_009439.1	3733761	3736472	R	superfamily I DNA/RNA helicase	complement(3733761..3736472)	Pseudomonas mendocina ymp	5105855
YP_001188868.1	CDS	Pmen_3384	NC_009439.1	3736472	3737161	R	phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein	complement(3736472..3737161)	Pseudomonas mendocina ymp	5105856
YP_001188869.1	CDS	Pmen_3385	NC_009439.1	3737175	3737726	R	PFAM: Rhomboid family protein; rhomboid family protein	complement(3737175..3737726)	Pseudomonas mendocina ymp	5105857
YP_001188870.1	CDS	Pmen_3386	NC_009439.1	3737723	3742957	R	hypothetical protein	complement(3737723..3742957)	Pseudomonas mendocina ymp	5105858
YP_001188871.1	CDS	Pmen_3387	NC_009439.1	3743134	3745179	R	hypothetical protein	complement(3743134..3745179)	Pseudomonas mendocina ymp	5105859
YP_001188872.1	CDS	Pmen_3388	NC_009439.1	3745271	3745912	R	hypothetical protein	complement(3745271..3745912)	Pseudomonas mendocina ymp	5105860
YP_001188873.1	CDS	Pmen_3389	NC_009439.1	3745973	3746668	R	PFAM: PspA/IM30 family protein; phage shock protein A, PspA	complement(3745973..3746668)	Pseudomonas mendocina ymp	5105861
YP_001188874.1	CDS	Pmen_3390	NC_009439.1	3746682	3747302	R	hypothetical protein	complement(3746682..3747302)	Pseudomonas mendocina ymp	5105862
YP_001188875.1	CDS	Pmen_3391	NC_009439.1	3747638	3748837	D	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F	3747638..3748837	Pseudomonas mendocina ymp	5105863
YP_001188876.1	CDS	Pmen_3392	NC_009439.1	3748839	3749090	D	hypothetical protein	3748839..3749090	Pseudomonas mendocina ymp	5105864
YP_001188877.1	CDS	Pmen_3393	NC_009439.1	3749140	3750549	R	catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase	complement(3749140..3750549)	Pseudomonas mendocina ymp	5105865
YP_001188878.1	CDS	Pmen_3394	NC_009439.1	3750607	3751911	R	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase	complement(3750607..3751911)	Pseudomonas mendocina ymp	5105866
YP_001188879.1	CDS	Pmen_3395	NC_009439.1	3752160	3752885	R	protein-disulfide isomerase-like protein	complement(3752160..3752885)	Pseudomonas mendocina ymp	5105867
YP_001188880.1	CDS	xerD	NC_009439.1	3752977	3753873	R	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD	complement(3752977..3753873)	Pseudomonas mendocina ymp	5105868
YP_001188881.1	CDS	Pmen_3397	NC_009439.1	3754091	3754771	D	hypothetical protein	3754091..3754771	Pseudomonas mendocina ymp	5105869
YP_001188882.1	CDS	rplS	NC_009439.1	3754860	3755210	R	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19	complement(3754860..3755210)	Pseudomonas mendocina ymp	5105870
YP_001188883.1	CDS	trmD	NC_009439.1	3755253	3755996	R	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase	complement(3755253..3755996)	Pseudomonas mendocina ymp	5105871
YP_001188884.1	CDS	rimM	NC_009439.1	3756002	3756538	R	Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM	complement(3756002..3756538)	Pseudomonas mendocina ymp	5105872
YP_001188885.1	CDS	rpsP	NC_009439.1	3756548	3756799	R	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16	complement(3756548..3756799)	Pseudomonas mendocina ymp	5105873
YP_001188886.1	CDS	Pmen_3402	NC_009439.1	3756942	3758318	R	TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle subunit FFH/SRP54 (srp54)	complement(3756942..3758318)	Pseudomonas mendocina ymp	5105874
YP_001188887.1	CDS	Pmen_3403	NC_009439.1	3758476	3759276	D	PFAM: cytochrome c assembly protein; cytochrome c assembly protein	3758476..3759276	Pseudomonas mendocina ymp	5105875
YP_001188888.1	CDS	Pmen_3404	NC_009439.1	3759287	3760573	D	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein	3759287..3760573	Pseudomonas mendocina ymp	5105876
YP_001188889.1	CDS	Pmen_3405	NC_009439.1	3760545	3761279	R	lysophospholipase L1 and related esterase-like protein	complement(3760545..3761279)	Pseudomonas mendocina ymp	5105877
YP_001188890.1	CDS	purT	NC_009439.1	3761276	3762457	R	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2	complement(3761276..3762457)	Pseudomonas mendocina ymp	5105878
YP_001188891.1	CDS	Pmen_3407	NC_009439.1	3762479	3762679	R	PFAM: protein of unknown function DUF1289; hypothetical protein	complement(3762479..3762679)	Pseudomonas mendocina ymp	5105879
YP_001188892.1	CDS	Pmen_3408	NC_009439.1	3762672	3763196	R	carbonic anhydrase	complement(3762672..3763196)	Pseudomonas mendocina ymp	5105880
YP_001188893.1	CDS	Pmen_3409	NC_009439.1	3763208	3763813	R	PFAM: NUDIX hydrolase; NUDIX hydrolase	complement(3763208..3763813)	Pseudomonas mendocina ymp	5105881
YP_001188894.1	CDS	Pmen_3410	NC_009439.1	3763965	3764519	D	PFAM: NUDIX hydrolase; NUDIX hydrolase	3763965..3764519	Pseudomonas mendocina ymp	5105882
YP_001188895.1	CDS	Pmen_3411	NC_009439.1	3764541	3765044	D	hypothetical protein	3764541..3765044	Pseudomonas mendocina ymp	5105883
YP_001188896.1	CDS	Pmen_3412	NC_009439.1	3765091	3765408	R	hypothetical protein	complement(3765091..3765408)	Pseudomonas mendocina ymp	5105884
YP_001188897.1	CDS	Pmen_3413	NC_009439.1	3765564	3765833	R	hypothetical protein	complement(3765564..3765833)	Pseudomonas mendocina ymp	5105885
YP_001188898.1	CDS	Pmen_3414	NC_009439.1	3766220	3770116	R	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase	complement(3766220..3770116)	Pseudomonas mendocina ymp	5105886
YP_001188899.1	CDS	Pmen_3415	NC_009439.1	3770282	3771748	D	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase	3770282..3771748	Pseudomonas mendocina ymp	5105887
YP_001188900.1	CDS	Pmen_3416	NC_009439.1	3771751	3772218	R	hypothetical protein	complement(3771751..3772218)	Pseudomonas mendocina ymp	5105888
YP_001188901.1	CDS	Pmen_3417	NC_009439.1	3772239	3772715	R	PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase	complement(3772239..3772715)	Pseudomonas mendocina ymp	5105889
YP_001188902.1	CDS	Pmen_3418	NC_009439.1	3772769	3774139	R	PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; multicopper oxidase, type 3	complement(3772769..3774139)	Pseudomonas mendocina ymp	5105890
YP_001188903.1	CDS	Pmen_3419	NC_009439.1	3774319	3774789	D	hypothetical protein	3774319..3774789	Pseudomonas mendocina ymp	5105891
YP_001188904.1	CDS	Pmen_3420	NC_009439.1	3774792	3775307	D	hypothetical protein	3774792..3775307	Pseudomonas mendocina ymp	5105892
YP_001188905.1	CDS	Pmen_3421	NC_009439.1	3775369	3775995	R	hypothetical protein	complement(3775369..3775995)	Pseudomonas mendocina ymp	5105893
YP_001188906.1	CDS	Pmen_3422	NC_009439.1	3776776	3777084	D	hypothetical protein	3776776..3777084	Pseudomonas mendocina ymp	5105894
YP_001188907.1	CDS	Pmen_3423	NC_009439.1	3777062	3777343	D	hypothetical protein	3777062..3777343	Pseudomonas mendocina ymp	5105895
YP_001188908.1	CDS	Pmen_3424	NC_009439.1	3777612	3780098	D	hypothetical protein	3777612..3780098	Pseudomonas mendocina ymp	5105896
YP_001188909.1	CDS	Pmen_3425	NC_009439.1	3780095	3781390	D	hypothetical protein	3780095..3781390	Pseudomonas mendocina ymp	5105897
YP_001188910.1	CDS	Pmen_3426	NC_009439.1	3781365	3783581	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase	3781365..3783581	Pseudomonas mendocina ymp	5105898
YP_001188911.1	CDS	Pmen_3427	NC_009439.1	3783970	3784470	D	hypothetical protein	3783970..3784470	Pseudomonas mendocina ymp	5105899
YP_001188912.1	CDS	Pmen_3428	NC_009439.1	3784524	3784871	D	hypothetical protein	3784524..3784871	Pseudomonas mendocina ymp	5105900
YP_001188913.1	CDS	Pmen_3429	NC_009439.1	3785026	3786327	D	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	3785026..3786327	Pseudomonas mendocina ymp	5105901
YP_001188914.1	CDS	Pmen_3430	NC_009439.1	3786564	3787217	R	PFAM: protein of unknown function UPF0153; hypothetical protein	complement(3786564..3787217)	Pseudomonas mendocina ymp	5105902
YP_001188915.1	CDS	Pmen_3431	NC_009439.1	3787388	3789169	R	hypothetical protein	complement(3787388..3789169)	Pseudomonas mendocina ymp	5105903
YP_001188916.1	CDS	Pmen_3433	NC_009439.1	3791083	3791721	D	PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase	3791083..3791721	Pseudomonas mendocina ymp	5107285
YP_001188917.1	CDS	Pmen_3434	NC_009439.1	3791718	3791930	D	hypothetical protein	3791718..3791930	Pseudomonas mendocina ymp	5105905
YP_001188918.1	CDS	Pmen_3436	NC_009439.1	3792928	3794508	R	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter	complement(3792928..3794508)	Pseudomonas mendocina ymp	5107286
YP_001188919.1	CDS	Pmen_3437	NC_009439.1	3794874	3795464	D	PFAM: protein of unknown function DUF1185; hypothetical protein	3794874..3795464	Pseudomonas mendocina ymp	5105907
YP_001188920.1	CDS	Pmen_3438	NC_009439.1	3795493	3796326	D	PFAM: alpha/beta hydrolase fold; Ndr family protein; 3-oxoadipate enol-lactonase	3795493..3796326	Pseudomonas mendocina ymp	5105908
YP_001188921.1	CDS	Pmen_3439	NC_009439.1	3796323	3797804	D	PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase	3796323..3797804	Pseudomonas mendocina ymp	5105909
YP_001188922.1	CDS	Pmen_3440	NC_009439.1	3797817	3798302	D	PFAM: flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein	3797817..3798302	Pseudomonas mendocina ymp	5105910
YP_001188923.1	CDS	Pmen_3441	NC_009439.1	3798530	3799969	D	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate semialdehyde dehydrogenase	3798530..3799969	Pseudomonas mendocina ymp	5105911
YP_001188924.1	CDS	Pmen_3442	NC_009439.1	3799988	3800371	D	PFAM: Carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase	3799988..3800371	Pseudomonas mendocina ymp	5105912
YP_001188925.1	CDS	Pmen_3443	NC_009439.1	3800404	3801204	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator	3800404..3801204	Pseudomonas mendocina ymp	5105913
YP_001188926.1	CDS	Pmen_3444	NC_009439.1	3801209	3801772	D	PFAM: NUDIX hydrolase; NUDIX hydrolase	3801209..3801772	Pseudomonas mendocina ymp	5105914
YP_001188927.1	CDS	Pmen_3445	NC_009439.1	3801908	3802240	R	PFAM: protein of unknown function DUF1330; hypothetical protein	complement(3801908..3802240)	Pseudomonas mendocina ymp	5105915
YP_001188928.1	CDS	Pmen_3446	NC_009439.1	3802276	3803385	D	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein	3802276..3803385	Pseudomonas mendocina ymp	5105916
YP_001188929.1	CDS	Pmen_3447	NC_009439.1	3803753	3804778	D	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	3803753..3804778	Pseudomonas mendocina ymp	5105917
YP_001188930.1	CDS	Pmen_3448	NC_009439.1	3804775	3805671	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	3804775..3805671	Pseudomonas mendocina ymp	5105918
YP_001188931.1	CDS	Pmen_3449	NC_009439.1	3805675	3806484	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	3805675..3806484	Pseudomonas mendocina ymp	5105919
YP_001188932.1	CDS	Pmen_3450	NC_009439.1	3806502	3807656	D	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein	3806502..3807656	Pseudomonas mendocina ymp	5105920
YP_001188933.1	CDS	Pmen_3451	NC_009439.1	3807947	3808432	D	PFAM: flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein	3807947..3808432	Pseudomonas mendocina ymp	5105921
YP_001188934.1	CDS	Pmen_3452	NC_009439.1	3808639	3809304	R	PFAM: regulatory protein, LuxR; PAS fold-3 domain protein; putative PAS/PAC sensor protein	complement(3808639..3809304)	Pseudomonas mendocina ymp	5105922
YP_001188935.1	CDS	Pmen_3453	NC_009439.1	3809497	3810024	D	hypothetical protein	3809497..3810024	Pseudomonas mendocina ymp	5105923
YP_001188936.1	CDS	Pmen_3454	NC_009439.1	3810021	3810950	D	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin	3810021..3810950	Pseudomonas mendocina ymp	5105924
YP_001188937.1	CDS	Pmen_3455	NC_009439.1	3810967	3811983	D	hypothetical protein	3810967..3811983	Pseudomonas mendocina ymp	5105925
YP_001188938.1	CDS	Pmen_3456	NC_009439.1	3812011	3813141	D	PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; glycine cleavage T protein (aminomethyl transferase)	3812011..3813141	Pseudomonas mendocina ymp	5105926
YP_001188939.1	CDS	Pmen_3457	NC_009439.1	3813175	3814029	D	TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; formyltetrahydrofolate deformylase	3813175..3814029	Pseudomonas mendocina ymp	5105927
YP_001188940.1	CDS	Pmen_3458	NC_009439.1	3814026	3814937	D	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	3814026..3814937	Pseudomonas mendocina ymp	5105928
YP_001188941.1	CDS	Pmen_3459	NC_009439.1	3814934	3816304	D	PFAM: flavin-containing monooxygenase FMO; flavin-containing monooxygenase	3814934..3816304	Pseudomonas mendocina ymp	5105929
YP_001188942.1	CDS	Pmen_3460	NC_009439.1	3816415	3818760	D	PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; glycine cleavage T protein (aminomethyl transferase)	3816415..3818760	Pseudomonas mendocina ymp	5105930
YP_001188943.1	CDS	Pmen_3461	NC_009439.1	3819036	3820022	D	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; methyl-accepting chemotaxis sensory transducer	3819036..3820022	Pseudomonas mendocina ymp	5105931
YP_001188944.1	CDS	Pmen_3462	NC_009439.1	3820271	3821644	D	PFAM: Rh family protein/ammonium transporter; Rh family protein/ammonium transporter	3820271..3821644	Pseudomonas mendocina ymp	5105932
YP_001188945.1	CDS	Pmen_3463	NC_009439.1	3821700	3821879	D	hypothetical protein	3821700..3821879	Pseudomonas mendocina ymp	5105933
YP_001188946.1	CDS	Pmen_3464	NC_009439.1	3822258	3822608	R	PFAM: small multidrug resistance protein; small multidrug resistance protein	complement(3822258..3822608)	Pseudomonas mendocina ymp	5105934
YP_001188947.1	CDS	Pmen_3465	NC_009439.1	3822671	3823993	R	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; dihydroorotate dehydrogenase; ferredoxin-dependent glutamate synthase; glutamate synthase (NADPH) GltB2 subunit	complement(3822671..3823993)	Pseudomonas mendocina ymp	5105935
YP_001188948.1	CDS	Pmen_3466	NC_009439.1	3824111	3824785	R	PFAM: glutamate synthase, alpha subunit domain protein; glutamate synthase (NADPH) GltB3 subunit	complement(3824111..3824785)	Pseudomonas mendocina ymp	5105936
YP_001188949.1	CDS	Pmen_3467	NC_009439.1	3824797	3825696	R	PFAM: glutamine amidotransferase, class-II; glutamate synthase (NADPH) GltB1 subunit	complement(3824797..3825696)	Pseudomonas mendocina ymp	5105937
YP_001188950.1	CDS	Pmen_3468	NC_009439.1	3825736	3827070	R	PFAM: glutamine synthetase, catalytic region; L-glutamine synthetase	complement(3825736..3827070)	Pseudomonas mendocina ymp	5105938
YP_001188951.1	CDS	Pmen_3469	NC_009439.1	3827427	3828020	D	PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; XRE family transcriptional regulator	3827427..3828020	Pseudomonas mendocina ymp	5105939
YP_001188952.1	CDS	Pmen_3470	NC_009439.1	3828336	3829202	D	TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; formyltetrahydrofolate deformylase	3828336..3829202	Pseudomonas mendocina ymp	5105940
YP_001188953.1	CDS	Pmen_3471	NC_009439.1	3829199	3830122	D	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	3829199..3830122	Pseudomonas mendocina ymp	5105941
YP_001188954.1	CDS	Pmen_3472	NC_009439.1	3830104	3831345	D	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	3830104..3831345	Pseudomonas mendocina ymp	5105942
YP_001188955.1	CDS	Pmen_3473	NC_009439.1	3831357	3831659	D	PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; sarcosine oxidase subunit delta	3831357..3831659	Pseudomonas mendocina ymp	5105943
YP_001188956.1	CDS	Pmen_3474	NC_009439.1	3831656	3834553	D	PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein, C-terminal barrel; aminomethyltransferase	3831656..3834553	Pseudomonas mendocina ymp	5105944
YP_001188957.1	CDS	Pmen_3475	NC_009439.1	3834557	3835135	D	hypothetical protein	3834557..3835135	Pseudomonas mendocina ymp	5105945
YP_001188958.1	CDS	Pmen_3476	NC_009439.1	3835310	3836095	D	PFAM: regulatory protein, IclR; Helix-turn-helix, type 11 domain protein; IclR family transcriptional regulator	3835310..3836095	Pseudomonas mendocina ymp	5105946
YP_001188959.1	CDS	Pmen_3478	NC_009439.1	3838257	3839300	D	PFAM: luciferase family protein; luciferase family protein	3838257..3839300	Pseudomonas mendocina ymp	5107287
YP_001188960.1	CDS	Pmen_3479	NC_009439.1	3839625	3840338	D	PFAM: isochorismatase hydrolase; isochorismatase hydrolase	3839625..3840338	Pseudomonas mendocina ymp	5105948
YP_001188961.1	CDS	Pmen_3481	NC_009439.1	3842143	3842526	D	PFAM: Prophage CP4-57 regulatory; phage transcriptional regulator AlpA	3842143..3842526	Pseudomonas mendocina ymp	5107288
YP_001188962.1	CDS	Pmen_3482	NC_009439.1	3842541	3843065	R	PFAM: Prophage CP4-57 regulatory; phage transcriptional regulator AlpA	complement(3842541..3843065)	Pseudomonas mendocina ymp	5105950
YP_001188963.1	CDS	Pmen_3483	NC_009439.1	3843070	3843345	R	hypothetical protein	complement(3843070..3843345)	Pseudomonas mendocina ymp	5105951
YP_001188964.1	CDS	Pmen_3484	NC_009439.1	3843406	3844662	R	PFAM: phage integrase family protein; phage integrase family protein	complement(3843406..3844662)	Pseudomonas mendocina ymp	5105952
YP_001188965.1	CDS	guaA	NC_009439.1	3844964	3846541	R	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase	complement(3844964..3846541)	Pseudomonas mendocina ymp	5105953
YP_001188966.1	CDS	Pmen_3486	NC_009439.1	3846750	3848219	R	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase	complement(3846750..3848219)	Pseudomonas mendocina ymp	5105954
YP_001188967.1	CDS	Pmen_3487	NC_009439.1	3848430	3848984	R	hypothetical protein	complement(3848430..3848984)	Pseudomonas mendocina ymp	5105955
YP_001188968.1	CDS	Pmen_3488	NC_009439.1	3849041	3849508	R	PFAM: transmembrane pair domain protein; transmembrane pair domain-containing protein	complement(3849041..3849508)	Pseudomonas mendocina ymp	5105956
YP_001188969.1	CDS	Pmen_3489	NC_009439.1	3849597	3850472	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	3849597..3850472	Pseudomonas mendocina ymp	5105957
YP_001188970.1	CDS	xseA	NC_009439.1	3850465	3851895	D	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit	3850465..3851895	Pseudomonas mendocina ymp	5105958
YP_001188971.1	CDS	Pmen_3491	NC_009439.1	3851902	3852744	D	PFAM: peptidase M23B; peptidase M23B	3851902..3852744	Pseudomonas mendocina ymp	5105959
YP_001188972.1	CDS	Pmen_3492	NC_009439.1	3853029	3854699	D	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase	3853029..3854699	Pseudomonas mendocina ymp	5105960
YP_001188973.1	CDS	Pmen_3493	NC_009439.1	3854938	3855399	R	hypothetical protein	complement(3854938..3855399)	Pseudomonas mendocina ymp	5105961
YP_001188974.1	CDS	Pmen_3494	NC_009439.1	3855411	3856193	R	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	complement(3855411..3856193)	Pseudomonas mendocina ymp	5105962
YP_001188975.1	CDS	Pmen_3495	NC_009439.1	3856226	3857374	R	catalyzes the transfer of an amino moiety; putative aminotransferase	complement(3856226..3857374)	Pseudomonas mendocina ymp	5105963
YP_001188976.1	CDS	engA	NC_009439.1	3857513	3858991	R	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA	complement(3857513..3858991)	Pseudomonas mendocina ymp	5105964
YP_001188977.1	CDS	Pmen_3497	NC_009439.1	3859090	3860229	R	PFAM: Pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone	complement(3859090..3860229)	Pseudomonas mendocina ymp	5105965
YP_001188978.1	CDS	Pmen_3498	NC_009439.1	3860234	3860872	R	hypothetical protein	complement(3860234..3860872)	Pseudomonas mendocina ymp	5105966
YP_001188979.1	CDS	hisS	NC_009439.1	3860905	3862191	R	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase	complement(3860905..3862191)	Pseudomonas mendocina ymp	5105967
YP_001188980.1	CDS	ispG	NC_009439.1	3862215	3863327	R	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	complement(3862215..3863327)	Pseudomonas mendocina ymp	5105968
YP_001188981.1	CDS	Pmen_3501	NC_009439.1	3863331	3864320	R	SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein	complement(3863331..3864320)	Pseudomonas mendocina ymp	5105969
YP_001188982.1	CDS	Pmen_3502	NC_009439.1	3864317	3865078	R	TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW	complement(3864317..3865078)	Pseudomonas mendocina ymp	5105970
YP_001188983.1	CDS	Pmen_3503	NC_009439.1	3865092	3866240	R	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; radical SAM protein	complement(3865092..3866240)	Pseudomonas mendocina ymp	5105971
YP_001188984.1	CDS	Pmen_3504	NC_009439.1	3866267	3866698	R	PFAM: nucleoside diphosphate kinase; nucleoside diphosphate kinase	complement(3866267..3866698)	Pseudomonas mendocina ymp	5105972
YP_001188985.1	CDS	Pmen_3505	NC_009439.1	3866856	3867053	R	PFAM: protein of unknown function DUF528; hypothetical protein	complement(3866856..3867053)	Pseudomonas mendocina ymp	5105973
YP_001188986.1	CDS	Pmen_3506	NC_009439.1	3867070	3867411	R	TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; ferredoxin, 2Fe-2S type, ISC system	complement(3867070..3867411)	Pseudomonas mendocina ymp	5105974
YP_001188987.1	CDS	hscA	NC_009439.1	3867415	3869280	R	involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA	complement(3867415..3869280)	Pseudomonas mendocina ymp	5105975
YP_001188988.1	CDS	hscB	NC_009439.1	3869326	3869847	R	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB	complement(3869326..3869847)	Pseudomonas mendocina ymp	5105976
YP_001188989.1	CDS	Pmen_3509	NC_009439.1	3869857	3870180	R	TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly protein IscA	complement(3869857..3870180)	Pseudomonas mendocina ymp	5105977
YP_001188990.1	CDS	Pmen_3510	NC_009439.1	3870194	3870580	R	TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; scaffold protein	complement(3870194..3870580)	Pseudomonas mendocina ymp	5105978
YP_001188991.1	CDS	Pmen_3511	NC_009439.1	3870624	3871838	R	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase	complement(3870624..3871838)	Pseudomonas mendocina ymp	5105979
YP_001188992.1	CDS	Pmen_3512	NC_009439.1	3871869	3872366	R	TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator	complement(3871869..3872366)	Pseudomonas mendocina ymp	5105980
YP_001188993.1	CDS	Pmen_3513	NC_009439.1	3872503	3873288	R	TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase	complement(3872503..3873288)	Pseudomonas mendocina ymp	5105981
YP_001188994.1	CDS	Pmen_3514	NC_009439.1	3873281	3874069	R	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase	complement(3873281..3874069)	Pseudomonas mendocina ymp	5105982
YP_001188995.1	CDS	Pmen_3515	NC_009439.1	3874206	3875021	D	PFAM: inositol monophosphatase; inositol-phosphate phosphatase	3874206..3875021	Pseudomonas mendocina ymp	5105983
YP_001188996.1	CDS	Pmen_3516	NC_009439.1	3875155	3875697	R	PFAM: 17 kDa surface antigen; hypothetical protein	complement(3875155..3875697)	Pseudomonas mendocina ymp	5105984
YP_001188997.1	CDS	secF	NC_009439.1	3875816	3876733	R	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF	complement(3875816..3876733)	Pseudomonas mendocina ymp	5105985
YP_001188998.1	CDS	secD	NC_009439.1	3876743	3878611	R	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD	complement(3876743..3878611)	Pseudomonas mendocina ymp	5105986
YP_001188999.1	CDS	yajC	NC_009439.1	3878683	3879012	R	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC	complement(3878683..3879012)	Pseudomonas mendocina ymp	5105987
YP_001189000.1	CDS	tgt	NC_009439.1	3879053	3880186	R	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase	complement(3879053..3880186)	Pseudomonas mendocina ymp	5105988
YP_001189001.1	CDS	queA	NC_009439.1	3880189	3881232	R	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase	complement(3880189..3881232)	Pseudomonas mendocina ymp	5105989
YP_001189002.1	CDS	Pmen_3522	NC_009439.1	3881324	3882154	R	amino acid ABC transporter periplasmic protein	complement(3881324..3882154)	Pseudomonas mendocina ymp	5105990
YP_001189003.1	CDS	Pmen_3523	NC_009439.1	3882691	3882903	D	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding protein family protein	3882691..3882903	Pseudomonas mendocina ymp	5107289
YP_001189004.1	CDS	Pmen_3524	NC_009439.1	3883008	3883505	D	PFAM: RDD domain containing protein; RDD domain-containing protein	3883008..3883505	Pseudomonas mendocina ymp	5105992
YP_001189005.1	CDS	Pmen_3525	NC_009439.1	3883566	3884630	R	PFAM: permease YjgP/YjgQ family protein; YjgP/YjgQ family permease	complement(3883566..3884630)	Pseudomonas mendocina ymp	5105993
YP_001189006.1	CDS	Pmen_3526	NC_009439.1	3884623	3885741	R	PFAM: permease YjgP/YjgQ family protein; YjgP/YjgQ family permease	complement(3884623..3885741)	Pseudomonas mendocina ymp	5105994
YP_001189007.1	CDS	Pmen_3527	NC_009439.1	3885833	3887371	D	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase	3885833..3887371	Pseudomonas mendocina ymp	5105995
YP_001189008.1	CDS	Pmen_3528	NC_009439.1	3887483	3887902	D	PFAM: DNA polymerase III chi subunit, HolC; DNA polymerase III subunit chi	3887483..3887902	Pseudomonas mendocina ymp	5105996
YP_001189009.1	CDS	Pmen_3529	NC_009439.1	3887963	3888406	D	hypothetical protein	3887963..3888406	Pseudomonas mendocina ymp	5105997
YP_001189010.1	CDS	valS	NC_009439.1	3888569	3891400	D	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase	3888569..3891400	Pseudomonas mendocina ymp	5105998
YP_001189011.1	CDS	Pmen_3531	NC_009439.1	3891504	3892937	D	PFAM: Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC	3891504..3892937	Pseudomonas mendocina ymp	5105999
YP_001189012.1	CDS	Pmen_3532	NC_009439.1	3893193	3894569	D	PFAM: Citrate transporter; citrate transporter	3893193..3894569	Pseudomonas mendocina ymp	5106000
YP_001189013.1	CDS	Pmen_3533	NC_009439.1	3894607	3894903	D	hypothetical protein	3894607..3894903	Pseudomonas mendocina ymp	5106001
YP_001189014.1	CDS	Pmen_3534	NC_009439.1	3895096	3896925	D	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; citrate transporter	3895096..3896925	Pseudomonas mendocina ymp	5106002
YP_001189015.1	CDS	Pmen_3535	NC_009439.1	3897040	3898041	D	PFAM: protein of unknown function DUF890; putative SAM-dependent methyltransferase	3897040..3898041	Pseudomonas mendocina ymp	5106003
YP_001189016.1	CDS	Pmen_3536	NC_009439.1	3898136	3899380	R	PFAM: Arsenical pump membrane protein; Citrate transporter; citrate transporter	complement(3898136..3899380)	Pseudomonas mendocina ymp	5106004
YP_001189017.1	CDS	Pmen_3537	NC_009439.1	3899610	3900152	R	PFAM: isochorismatase hydrolase; isochorismatase hydrolase	complement(3899610..3900152)	Pseudomonas mendocina ymp	5106005
YP_001189018.1	CDS	Pmen_3538	NC_009439.1	3900155	3903589	R	PFAM: SMC domain protein; SMC domain-containing protein	complement(3900155..3903589)	Pseudomonas mendocina ymp	5106006
YP_001189019.1	CDS	Pmen_3539	NC_009439.1	3903648	3904010	R	hypothetical protein	complement(3903648..3904010)	Pseudomonas mendocina ymp	5106007
YP_001189020.1	CDS	Pmen_3540	NC_009439.1	3904101	3905198	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	complement(3904101..3905198)	Pseudomonas mendocina ymp	5106008
YP_001189021.1	CDS	Pmen_3541	NC_009439.1	3905508	3906467	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	complement(3905508..3906467)	Pseudomonas mendocina ymp	5106009
YP_001189022.1	CDS	Pmen_3542	NC_009439.1	3906881	3908095	R	with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease subunit SbcD	complement(3906881..3908095)	Pseudomonas mendocina ymp	5106089
YP_001189023.1	CDS	Pmen_3543	NC_009439.1	3908321	3909118	D	ribosomal protein L11 methylase-like protein	3908321..3909118	Pseudomonas mendocina ymp	5106090
YP_001189024.1	CDS	Pmen_3544	NC_009439.1	3909122	3910468	D	PFAM: amino acid permease-associated region; amino acid permease-associated protein	3909122..3910468	Pseudomonas mendocina ymp	5106091
YP_001189025.1	CDS	Pmen_3545	NC_009439.1	3910479	3910952	R	PFAM: regulatory protein, AsnC/Lrp family; regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein; AsnC family transcriptional regulator	complement(3910479..3910952)	Pseudomonas mendocina ymp	5106092
YP_001189026.1	CDS	Pmen_3546	NC_009439.1	3911021	3912274	D	uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH	3911021..3912274	Pseudomonas mendocina ymp	5106093
YP_001189027.1	CDS	Pmen_3547	NC_009439.1	3912509	3913879	D	TRAP-type transport system periplasmic component-like protein	3912509..3913879	Pseudomonas mendocina ymp	5106094
YP_001189028.1	CDS	Pmen_3548	NC_009439.1	3913996	3915663	R	PFAM: peptidase M20; protease-associated PA domain protein; peptidase M28; aminopeptidase Y	complement(3913996..3915663)	Pseudomonas mendocina ymp	5106095
YP_001189029.1	CDS	Pmen_3549	NC_009439.1	3915943	3916950	D	PFAM: 37kDa nucleoid-associated protein; nucleoid-associated protein NdpA	3915943..3916950	Pseudomonas mendocina ymp	5106096
YP_001189030.1	CDS	Pmen_3550	NC_009439.1	3916952	3917800	D	PFAM: protein of unknown function DUF344; hypothetical protein	3916952..3917800	Pseudomonas mendocina ymp	5106097
YP_001189031.1	CDS	Pmen_3551	NC_009439.1	3917797	3918117	D	PFAM: glutaredoxin; glutaredoxin	3917797..3918117	Pseudomonas mendocina ymp	5106098
YP_001189032.1	CDS	Pmen_3552	NC_009439.1	3918183	3919118	R	glutathione S-transferase-like protein	complement(3918183..3919118)	Pseudomonas mendocina ymp	5106099
YP_001189033.1	CDS	Pmen_3553	NC_009439.1	3919183	3919464	R	PFAM: Excinuclease ABC, C subunit domain protein; GIY-YIG nuclease superfamily protein	complement(3919183..3919464)	Pseudomonas mendocina ymp	5106100
YP_001189034.1	CDS	Pmen_3554	NC_009439.1	3919461	3920225	R	PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol-choline O-phosphatidyltransferase	complement(3919461..3920225)	Pseudomonas mendocina ymp	5106101
YP_001189035.1	CDS	Pmen_3555	NC_009439.1	3920279	3920749	R	PFAM: protein of unknown function DUF1486; hypothetical protein	complement(3920279..3920749)	Pseudomonas mendocina ymp	5106102
YP_001189036.1	CDS	Pmen_3556	NC_009439.1	3920910	3921869	D	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; transcriptional regulator	3920910..3921869	Pseudomonas mendocina ymp	5106103
YP_001189037.1	CDS	Pmen_3557	NC_009439.1	3922017	3922778	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(3922017..3922778)	Pseudomonas mendocina ymp	5106104
YP_001189038.1	CDS	Pmen_3558	NC_009439.1	3922788	3923885	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	complement(3922788..3923885)	Pseudomonas mendocina ymp	5106105
YP_001189039.1	CDS	Pmen_3559	NC_009439.1	3923895	3925079	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	complement(3923895..3925079)	Pseudomonas mendocina ymp	5106106
YP_001189040.1	CDS	Pmen_3560	NC_009439.1	3925178	3926206	R	PFAM: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(3925178..3926206)	Pseudomonas mendocina ymp	5106107
YP_001189041.1	CDS	Pmen_3561	NC_009439.1	3926684	3927343	D	PFAM: phospholipase/Carboxylesterase; carboxylesterase	3926684..3927343	Pseudomonas mendocina ymp	5106108
YP_001189042.1	CDS	Pmen_3562	NC_009439.1	3927458	3929359	D	activates fatty acids by binding to coenzyme A; AMP-binding domain-containing protein	3927458..3929359	Pseudomonas mendocina ymp	5106109
YP_001189043.1	CDS	Pmen_3563	NC_009439.1	3929551	3930489	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; cyclic nucleotide-binding; cyclic nucleotide-binding protein	3929551..3930489	Pseudomonas mendocina ymp	5106110
YP_001189044.1	CDS	Pmen_3564	NC_009439.1	3930588	3931751	D	PFAM: amidohydrolase 2; peptidase M19, renal dipeptidase; peptidase M19	3930588..3931751	Pseudomonas mendocina ymp	5106111
YP_001189045.1	CDS	Pmen_3565	NC_009439.1	3931851	3933299	D	enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB	3931851..3933299	Pseudomonas mendocina ymp	5106112
YP_001189046.1	CDS	Pmen_3566	NC_009439.1	3933635	3934594	D	PFAM: ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase	3933635..3934594	Pseudomonas mendocina ymp	5106113
YP_001189047.1	CDS	Pmen_3567	NC_009439.1	3934597	3935742	D	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	3934597..3935742	Pseudomonas mendocina ymp	5106114
YP_001189048.1	CDS	Pmen_3568	NC_009439.1	3935855	3936484	D	PFAM: YheO domain protein; YheO domain-containing protein	3935855..3936484	Pseudomonas mendocina ymp	5106115
YP_001189049.1	CDS	Pmen_3569	NC_009439.1	3936489	3936935	D	hypothetical protein	3936489..3936935	Pseudomonas mendocina ymp	5106116
YP_001189050.1	CDS	Pmen_3570	NC_009439.1	3936972	3937586	R	PFAM: isochorismatase hydrolase; isochorismatase hydrolase	complement(3936972..3937586)	Pseudomonas mendocina ymp	5106117
YP_001189051.1	CDS	Pmen_3571	NC_009439.1	3937730	3938683	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	3937730..3938683	Pseudomonas mendocina ymp	5106118
YP_001189052.1	CDS	Pmen_3572	NC_009439.1	3938764	3941124	R	Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II	complement(3938764..3941124)	Pseudomonas mendocina ymp	5106119
YP_001189053.1	CDS	Pmen_3573	NC_009439.1	3941414	3942742	D	PFAM: cation transporter; H(+)-transporting two-sector ATPase	3941414..3942742	Pseudomonas mendocina ymp	5106120
YP_001189054.1	CDS	Pmen_3574	NC_009439.1	3942735	3943427	D	PFAM: TrkA-N domain protein; TrkA-C domain protein; TrkA domain-containing protein	3942735..3943427	Pseudomonas mendocina ymp	5106121
YP_001189055.1	CDS	Pmen_3575	NC_009439.1	3943459	3943920	D	PFAM: globin; globin	3943459..3943920	Pseudomonas mendocina ymp	5106122
YP_001189056.1	CDS	Pmen_3576	NC_009439.1	3943917	3944255	D	PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase	3943917..3944255	Pseudomonas mendocina ymp	5106123
YP_001189057.1	CDS	Pmen_3577	NC_009439.1	3944248	3945174	D	SAM-dependent methyltransferase-like protein	3944248..3945174	Pseudomonas mendocina ymp	5106124
YP_001189058.1	CDS	Pmen_3578	NC_009439.1	3945272	3946048	R	TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein, family 3; cationic amino acid ABC transporter periplasmic binding protein	complement(3945272..3946048)	Pseudomonas mendocina ymp	5106125
YP_001189059.1	CDS	Pmen_3579	NC_009439.1	3946353	3947903	R	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator	complement(3946353..3947903)	Pseudomonas mendocina ymp	5106126
YP_001189060.1	CDS	Pmen_3580	NC_009439.1	3948096	3949277	D	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase	3948096..3949277	Pseudomonas mendocina ymp	5106127
YP_001189061.1	CDS	Pmen_3581	NC_009439.1	3949297	3949548	D	hypothetical protein	3949297..3949548	Pseudomonas mendocina ymp	5106128
YP_001189062.1	CDS	Pmen_3582	NC_009439.1	3949535	3950710	D	PFAM: NnrS family protein; NnrS family protein	3949535..3950710	Pseudomonas mendocina ymp	5106129
YP_001189063.1	CDS	Pmen_3583	NC_009439.1	3950757	3951464	R	Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A	complement(3950757..3951464)	Pseudomonas mendocina ymp	5106130
YP_001189064.1	CDS	Pmen_3584	NC_009439.1	3951454	3952635	R	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; hypothetical protein	complement(3951454..3952635)	Pseudomonas mendocina ymp	5106131
YP_001189065.1	CDS	Pmen_3585	NC_009439.1	3952893	3953339	D	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; TraR/DksA family transcriptional regulator	3952893..3953339	Pseudomonas mendocina ymp	5106132
YP_001189066.1	CDS	Pmen_3586	NC_009439.1	3953390	3954274	D	this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase	3953390..3954274	Pseudomonas mendocina ymp	5106133
YP_001189067.1	CDS	Pmen_3587	NC_009439.1	3954414	3954590	D	hypothetical protein	3954414..3954590	Pseudomonas mendocina ymp	5106134
YP_001189068.1	CDS	Pmen_3588	NC_009439.1	3954574	3957528	D	TIGRFAM: PAS sensor protein; PFAM: Na+/solute symporter; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; two-component sensor kinase CbrA	3954574..3957528	Pseudomonas mendocina ymp	5106135
YP_001189069.1	CDS	Pmen_3589	NC_009439.1	3957582	3959015	D	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two-component response regulator CbrB	3957582..3959015	Pseudomonas mendocina ymp	5106136
YP_001189070.1	CDS	Pmen_3590	NC_009439.1	3959842	3961233	D	TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase	3959842..3961233	Pseudomonas mendocina ymp	5106137
YP_001189071.1	CDS	Pmen_3591	NC_009439.1	3961230	3961718	D	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	3961230..3961718	Pseudomonas mendocina ymp	5106138
YP_001189072.1	CDS	panB	NC_009439.1	3961992	3962792	D	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase	3961992..3962792	Pseudomonas mendocina ymp	5106139
YP_001189073.1	CDS	panC	NC_009439.1	3962789	3963646	D	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase	3962789..3963646	Pseudomonas mendocina ymp	5106140
YP_001189074.1	CDS	pgi	NC_009439.1	3963725	3965389	D	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase	3963725..3965389	Pseudomonas mendocina ymp	5106141
YP_001189075.1	CDS	Pmen_3595	NC_009439.1	3965694	3967631	D	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase	3965694..3967631	Pseudomonas mendocina ymp	5106142
YP_001189076.1	CDS	Pmen_3596	NC_009439.1	3967752	3968618	D	hypothetical protein	3967752..3968618	Pseudomonas mendocina ymp	5106143
YP_001189077.1	CDS	Pmen_3597	NC_009439.1	3968709	3969890	D	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase	3968709..3969890	Pseudomonas mendocina ymp	5106144
YP_001189078.1	CDS	Pmen_3598	NC_009439.1	3970033	3971049	D	PFAM: conserved hypothetical protein 95; hypothetical protein	3970033..3971049	Pseudomonas mendocina ymp	5106145
YP_001189079.1	CDS	Pmen_3599	NC_009439.1	3971154	3974036	D	PFAM: protein of unknown function DUF748; hypothetical protein	3971154..3974036	Pseudomonas mendocina ymp	5106146
YP_001189080.1	CDS	Pmen_3600	NC_009439.1	3974033	3974329	D	hypothetical protein	3974033..3974329	Pseudomonas mendocina ymp	5106147
YP_001189081.1	CDS	Pmen_3601	NC_009439.1	3974343	3974645	D	hypothetical protein	3974343..3974645	Pseudomonas mendocina ymp	5106148
YP_001189082.1	CDS	Pmen_3602	NC_009439.1	3974799	3974996	R	PFAM: CsbD family protein; CsbD family protein	complement(3974799..3974996)	Pseudomonas mendocina ymp	5106149
YP_001189083.1	CDS	Pmen_3603	NC_009439.1	3975051	3975401	R	PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; transport-associated	complement(3975051..3975401)	Pseudomonas mendocina ymp	5106150
YP_001189084.1	CDS	Pmen_3604	NC_009439.1	3975788	3977965	R	PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase	complement(3975788..3977965)	Pseudomonas mendocina ymp	5106151
YP_001189085.1	CDS	rpsO	NC_009439.1	3978068	3978337	R	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15	complement(3978068..3978337)	Pseudomonas mendocina ymp	5106152
YP_001189086.1	CDS	truB	NC_009439.1	3978505	3979425	R	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B	complement(3978505..3979425)	Pseudomonas mendocina ymp	5106153
YP_001189087.1	CDS	rbfA	NC_009439.1	3979428	3979817	R	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A	complement(3979428..3979817)	Pseudomonas mendocina ymp	5106154
YP_001189088.1	CDS	infB	NC_009439.1	3979930	3982416	R	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2	complement(3979930..3982416)	Pseudomonas mendocina ymp	5106155
YP_001189089.1	CDS	nusA	NC_009439.1	3982444	3983925	R	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA	complement(3982444..3983925)	Pseudomonas mendocina ymp	5106156
YP_001189090.1	CDS	Pmen_3610	NC_009439.1	3984086	3984544	R	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein	complement(3984086..3984544)	Pseudomonas mendocina ymp	5106157
YP_001189091.1	CDS	secG	NC_009439.1	3984941	3985318	R	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG	complement(3984941..3985318)	Pseudomonas mendocina ymp	5107291
YP_001189092.1	CDS	tpiA	NC_009439.1	3985322	3986077	R	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase	complement(3985322..3986077)	Pseudomonas mendocina ymp	5106159
YP_001189093.1	CDS	glmM	NC_009439.1	3986143	3987480	R	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase	complement(3986143..3987480)	Pseudomonas mendocina ymp	5106160
YP_001189094.1	CDS	Pmen_3614	NC_009439.1	3987494	3988345	R	TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase	complement(3987494..3988345)	Pseudomonas mendocina ymp	5106161
YP_001189095.1	CDS	Pmen_3615	NC_009439.1	3988354	3990276	R	TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; membrane protease FtsH catalytic subunit	complement(3988354..3990276)	Pseudomonas mendocina ymp	5106162
YP_001189096.1	CDS	Pmen_3616	NC_009439.1	3990440	3991063	R	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ	complement(3990440..3991063)	Pseudomonas mendocina ymp	5106163
YP_001189097.1	CDS	Pmen_3617	NC_009439.1	3991154	3991465	D	PFAM: protein of unknown function UPF0044; hypothetical protein	3991154..3991465	Pseudomonas mendocina ymp	5106164
YP_001189098.1	CDS	Pmen_3618	NC_009439.1	3991549	3992010	R	hypothetical protein	complement(3991549..3992010)	Pseudomonas mendocina ymp	5106165
YP_001189099.1	CDS	greA	NC_009439.1	3991967	3992443	R	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA	complement(3991967..3992443)	Pseudomonas mendocina ymp	5106166
YP_001189100.1	CDS	carB	NC_009439.1	3992440	3995661	R	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit	complement(3992440..3995661)	Pseudomonas mendocina ymp	5106167
YP_001189101.1	CDS	Pmen_3621	NC_009439.1	3995698	3996846	R	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit	complement(3995698..3996846)	Pseudomonas mendocina ymp	5110082
YP_001189102.1	CDS	Pmen_3622	NC_009439.1	3997036	3997839	R	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase	complement(3997036..3997839)	Pseudomonas mendocina ymp	5110083
YP_001189103.1	CDS	Pmen_3623	NC_009439.1	3997888	3999015	R	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ	complement(3997888..3999015)	Pseudomonas mendocina ymp	5110084
YP_001189104.1	CDS	dnaK	NC_009439.1	3999151	4001064	R	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK	complement(3999151..4001064)	Pseudomonas mendocina ymp	5110085
YP_001189105.1	CDS	Pmen_3625	NC_009439.1	4001164	4001733	R	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE	complement(4001164..4001733)	Pseudomonas mendocina ymp	5110086
YP_001189106.1	CDS	Pmen_3626	NC_009439.1	4001891	4003567	D	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN	4001891..4003567	Pseudomonas mendocina ymp	5110087
YP_001189107.1	CDS	Pmen_3627	NC_009439.1	4003671	4004090	R	PFAM: ferric-uptake regulator; ferric uptake regulator family protein	complement(4003671..4004090)	Pseudomonas mendocina ymp	5110088
YP_001189108.1	CDS	Pmen_3628	NC_009439.1	4004170	4004688	D	PFAM: SmpA/OmlA domain protein; SmpA/OmlA domain-containing protein	4004170..4004688	Pseudomonas mendocina ymp	5110089
YP_001189109.1	CDS	Pmen_3629	NC_009439.1	4004767	4005087	R	PFAM: protein of unknown function UPF0125; hypothetical protein	complement(4004767..4005087)	Pseudomonas mendocina ymp	5110090
YP_001189110.1	CDS	Pmen_3630	NC_009439.1	4005080	4005514	R	PFAM: cyclase/dehydrase; cyclase/dehydrase	complement(4005080..4005514)	Pseudomonas mendocina ymp	5110091
YP_001189111.1	CDS	Pmen_3631	NC_009439.1	4005514	4006917	R	PFAM: sodium:neurotransmitter symporter; sodium:neurotransmitter symporter	complement(4005514..4006917)	Pseudomonas mendocina ymp	5110092
YP_001189112.1	CDS	smpB	NC_009439.1	4007006	4007527	D	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein	4007006..4007527	Pseudomonas mendocina ymp	5110093
YP_001189113.1	CDS	Pmen_3633	NC_009439.1	4007775	4008548	R	PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator	complement(4007775..4008548)	Pseudomonas mendocina ymp	5110094
YP_001189114.1	CDS	Pmen_3634	NC_009439.1	4008846	4010540	D	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport	4008846..4010540	Pseudomonas mendocina ymp	5110095
YP_001189115.1	CDS	lldD	NC_009439.1	4010633	4011772	D	flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase	4010633..4011772	Pseudomonas mendocina ymp	5110096
YP_001189116.1	CDS	Pmen_3636	NC_009439.1	4011777	4013549	D	component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase	4011777..4013549	Pseudomonas mendocina ymp	5110097
YP_001189117.1	CDS	Pmen_3637	NC_009439.1	4013546	4013905	D	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	4013546..4013905	Pseudomonas mendocina ymp	5110098
YP_001189118.1	CDS	Pmen_3638	NC_009439.1	4013925	4015487	D	PFAM: transposase IS66; transposase IS66	4013925..4015487	Pseudomonas mendocina ymp	5110099
YP_001189119.1	CDS	Pmen_3639	NC_009439.1	4015771	4018335	R	PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase	complement(4015771..4018335)	Pseudomonas mendocina ymp	5110100
YP_001189120.1	CDS	Pmen_3640	NC_009439.1	4018455	4019192	R	PFAM: nitroreductase; nitroreductase	complement(4018455..4019192)	Pseudomonas mendocina ymp	5110101
YP_001189121.1	CDS	Pmen_3641	NC_009439.1	4019322	4019807	R	PFAM: glutathione peroxidase; peroxiredoxin	complement(4019322..4019807)	Pseudomonas mendocina ymp	5110102
YP_001189122.1	CDS	Pmen_3642	NC_009439.1	4019983	4020468	R	PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase	complement(4019983..4020468)	Pseudomonas mendocina ymp	5110103
YP_001189123.1	CDS	Pmen_3643	NC_009439.1	4020480	4020764	D	hypothetical protein	4020480..4020764	Pseudomonas mendocina ymp	5110104
YP_001189124.1	CDS	Pmen_3644	NC_009439.1	4020765	4021949	D	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase	4020765..4021949	Pseudomonas mendocina ymp	5110105
YP_001189125.1	CDS	Pmen_3645	NC_009439.1	4021959	4024052	D	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase	4021959..4024052	Pseudomonas mendocina ymp	5110106
YP_001189126.1	CDS	Pmen_3646	NC_009439.1	4024283	4025179	D	PFAM: phospholipid/glycerol acyltransferase; putative acyltransferase	4024283..4025179	Pseudomonas mendocina ymp	5110107
YP_001189127.1	CDS	Pmen_3647	NC_009439.1	4025195	4027342	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; SMART: PAS domain containing protein; response regulator receiver modulated diguanylate cyclase/phosphodiesterase	complement(4025195..4027342)	Pseudomonas mendocina ymp	5110108
YP_001189128.1	CDS	Pmen_3648	NC_009439.1	4027387	4031100	R	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase	complement(4027387..4031100)	Pseudomonas mendocina ymp	5110109
YP_001189129.1	CDS	Pmen_3649	NC_009439.1	4031345	4032001	R	PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; OmpA/MotB domain-containing protein	complement(4031345..4032001)	Pseudomonas mendocina ymp	5110110
YP_001189130.1	CDS	Pmen_3650	NC_009439.1	4032142	4032810	R	PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; OmpA/MotB domain-containing protein	complement(4032142..4032810)	Pseudomonas mendocina ymp	5110111
YP_001189131.1	CDS	Pmen_3651	NC_009439.1	4032871	4033518	R	PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein	complement(4032871..4033518)	Pseudomonas mendocina ymp	5110112
YP_001189132.1	CDS	Pmen_3652	NC_009439.1	4033518	4034540	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	complement(4033518..4034540)	Pseudomonas mendocina ymp	5110113
YP_001189133.1	CDS	Pmen_3653	NC_009439.1	4034635	4035489	D	metal-dependent hydrolase-like protein	4034635..4035489	Pseudomonas mendocina ymp	5110114
YP_001189134.1	CDS	Pmen_3654	NC_009439.1	4035754	4036599	D	metal-dependent hydrolase-like protein	4035754..4036599	Pseudomonas mendocina ymp	5110115
YP_001189135.1	CDS	Pmen_3655	NC_009439.1	4036715	4037653	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(4036715..4037653)	Pseudomonas mendocina ymp	5110116
YP_001189136.1	CDS	Pmen_3656	NC_009439.1	4037724	4038395	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(4037724..4038395)	Pseudomonas mendocina ymp	5110117
YP_001189137.1	CDS	Pmen_3657	NC_009439.1	4038478	4039338	D	hypothetical protein	4038478..4039338	Pseudomonas mendocina ymp	5110118
YP_001189138.1	CDS	Pmen_3658	NC_009439.1	4039327	4042071	R	PFAM: regulatory protein, LuxR; SMART: AAA ATPase; regulatory protein LuxR	complement(4039327..4042071)	Pseudomonas mendocina ymp	5110119
YP_001189139.1	CDS	Pmen_3659	NC_009439.1	4042214	4043587	R	PFAM: protein of unknown function DUF1329; hypothetical protein	complement(4042214..4043587)	Pseudomonas mendocina ymp	5110120
YP_001189140.1	CDS	Pmen_3660	NC_009439.1	4043614	4045593	R	PFAM: protein of unknown function DUF1302; hypothetical protein	complement(4043614..4045593)	Pseudomonas mendocina ymp	5110121
YP_001189141.1	CDS	Pmen_3661	NC_009439.1	4045808	4047490	R	activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase	complement(4045808..4047490)	Pseudomonas mendocina ymp	5110122
YP_001189142.1	CDS	Pmen_3662	NC_009439.1	4047681	4048856	D	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase	4047681..4048856	Pseudomonas mendocina ymp	5110123
YP_001189143.1	CDS	Pmen_3663	NC_009439.1	4048902	4049531	R	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	complement(4048902..4049531)	Pseudomonas mendocina ymp	5110124
YP_001189144.1	CDS	Pmen_3664	NC_009439.1	4049611	4050576	D	Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; glycerate dehydrogenase	4049611..4050576	Pseudomonas mendocina ymp	5110125
YP_001189145.1	CDS	Pmen_3665	NC_009439.1	4050697	4051692	D	PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; Methyltransferase small, N-terminal domain protein; 16S rRNA m(2)G 1207 methyltransferase	4050697..4051692	Pseudomonas mendocina ymp	5110126
YP_001189146.1	CDS	Pmen_3666	NC_009439.1	4051937	4052521	D	PFAM: protein of unknown function UPF0016; hypothetical protein	4051937..4052521	Pseudomonas mendocina ymp	5110127
YP_001189147.1	CDS	Pmen_3667	NC_009439.1	4052631	4053074	D	PFAM: protein of unknown function DUF1486; hypothetical protein	4052631..4053074	Pseudomonas mendocina ymp	5110128
YP_001189148.1	CDS	Pmen_3668	NC_009439.1	4053137	4053958	R	PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p	complement(4053137..4053958)	Pseudomonas mendocina ymp	5110129
YP_001189149.1	CDS	Pmen_3669	NC_009439.1	4054154	4056304	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	4054154..4056304	Pseudomonas mendocina ymp	5110130
YP_001189150.1	CDS	Pmen_3670	NC_009439.1	4056392	4057009	R	PFAM: protein of unknown function DUF159; hypothetical protein	complement(4056392..4057009)	Pseudomonas mendocina ymp	5110131
YP_001189151.1	CDS	Pmen_3671	NC_009439.1	4057040	4057300	R	hypothetical protein	complement(4057040..4057300)	Pseudomonas mendocina ymp	5110132
YP_001189152.1	CDS	Pmen_3672	NC_009439.1	4057582	4058745	D	PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase	4057582..4058745	Pseudomonas mendocina ymp	5110133
YP_001189153.1	CDS	Pmen_3673	NC_009439.1	4058807	4059082	R	hypothetical protein	complement(4058807..4059082)	Pseudomonas mendocina ymp	5110134
YP_001189154.1	CDS	Pmen_3674	NC_009439.1	4059357	4059563	D	hypothetical protein	4059357..4059563	Pseudomonas mendocina ymp	5110135
YP_001189155.1	CDS	Pmen_3675	NC_009439.1	4059620	4060204	R	hypothetical protein	complement(4059620..4060204)	Pseudomonas mendocina ymp	5110136
YP_001189156.1	CDS	Pmen_3676	NC_009439.1	4060372	4060599	D	hypothetical protein	4060372..4060599	Pseudomonas mendocina ymp	5110137
YP_001189157.1	CDS	Pmen_3677	NC_009439.1	4061048	4062544	D	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase	4061048..4062544	Pseudomonas mendocina ymp	5110138
YP_001189158.1	CDS	Pmen_3678	NC_009439.1	4062648	4063106	R	PFAM: CreA family protein; CreA family protein	complement(4062648..4063106)	Pseudomonas mendocina ymp	5110139
YP_001189159.1	CDS	Pmen_3679	NC_009439.1	4063116	4064234	R	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase	complement(4063116..4064234)	Pseudomonas mendocina ymp	5110140
YP_001189160.1	CDS	obgE	NC_009439.1	4064316	4065536	R	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE	complement(4064316..4065536)	Pseudomonas mendocina ymp	5110141
YP_001189161.1	CDS	rpmA	NC_009439.1	4065779	4066036	R	involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27	complement(4065779..4066036)	Pseudomonas mendocina ymp	5110142
YP_001189162.1	CDS	rplU	NC_009439.1	4066074	4066385	R	PFAM: ribosomal protein L21; 50S ribosomal protein L21	complement(4066074..4066385)	Pseudomonas mendocina ymp	5110143
YP_001189163.1	CDS	Pmen_3683	NC_009439.1	4066632	4067600	D	PFAM: Polyprenyl synthetase; polyprenyl synthetase	4066632..4067600	Pseudomonas mendocina ymp	5110144
YP_001189164.1	CDS	fabG	NC_009439.1	4067734	4068492	R	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	complement(4067734..4068492)	Pseudomonas mendocina ymp	5110145
YP_001189165.1	CDS	Pmen_3685	NC_009439.1	4068601	4069335	D	PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein	4068601..4069335	Pseudomonas mendocina ymp	5110146
YP_001189166.1	CDS	fxsA	NC_009439.1	4069403	4069852	D	F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein	4069403..4069852	Pseudomonas mendocina ymp	5110147
YP_001189167.1	CDS	groES	NC_009439.1	4070173	4070466	D	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES	4070173..4070466	Pseudomonas mendocina ymp	5110148
YP_001189168.1	CDS	groEL	NC_009439.1	4070516	4072162	D	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL	4070516..4072162	Pseudomonas mendocina ymp	5110149
YP_001189169.1	CDS	Pmen_3689	NC_009439.1	4072400	4073104	D	PFAM: lipopolysaccharide kinase; Mn2+-dependent serine/threonine protein kinase	4072400..4073104	Pseudomonas mendocina ymp	5110150
YP_001189170.1	CDS	Pmen_3690	NC_009439.1	4073464	4073700	D	hypothetical protein	4073464..4073700	Pseudomonas mendocina ymp	5110151
YP_001189171.1	CDS	Pmen_3691	NC_009439.1	4073834	4074652	D	hypothetical protein	4073834..4074652	Pseudomonas mendocina ymp	5110152
YP_001189172.1	CDS	Pmen_3692	NC_009439.1	4074719	4075807	D	PFAM: protein of unknown function DUF450; hypothetical protein	4074719..4075807	Pseudomonas mendocina ymp	5110153
YP_001189173.1	CDS	Pmen_3693	NC_009439.1	4076291	4077118	R	PFAM: N-acetyltransferase; N-hydroxyarylamine O-acetyltransferase	complement(4076291..4077118)	Pseudomonas mendocina ymp	5110154
YP_001189174.1	CDS	Pmen_3694	NC_009439.1	4077242	4078738	R	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase	complement(4077242..4078738)	Pseudomonas mendocina ymp	5110155
YP_001189175.1	CDS	Pmen_3695	NC_009439.1	4078827	4080173	R	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase	complement(4078827..4080173)	Pseudomonas mendocina ymp	5110156
YP_001189176.1	CDS	Pmen_3696	NC_009439.1	4080338	4081255	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	4080338..4081255	Pseudomonas mendocina ymp	5110157
YP_001189177.1	CDS	Pmen_3697	NC_009439.1	4081593	4082393	D	nucleoside-binding outer membrane protein-like protein	4081593..4082393	Pseudomonas mendocina ymp	5110158
YP_001189178.1	CDS	Pmen_3698	NC_009439.1	4082467	4083843	D	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease	4082467..4083843	Pseudomonas mendocina ymp	5110159
YP_001189179.1	CDS	Pmen_3699	NC_009439.1	4084002	4084664	D	PFAM: regulatory protein, TetR; Tetracycline transcriptional regulator YcdC, C-terminal domain protein; TetR family transcriptional regulator	4084002..4084664	Pseudomonas mendocina ymp	5110160
YP_001189180.1	CDS	Pmen_3700	NC_009439.1	4084664	4085248	D	PFAM: protein of unknown function UPF0029; hypothetical protein	4084664..4085248	Pseudomonas mendocina ymp	5105695
YP_001189181.1	CDS	Pmen_3701	NC_009439.1	4085245	4085802	D	PFAM: protein of unknown function DUF922; hypothetical protein	4085245..4085802	Pseudomonas mendocina ymp	5105696
YP_001189182.1	CDS	Pmen_3702	NC_009439.1	4085848	4086531	D	PFAM: short-chain dehydrogenase/reductase SDR; short chain dehydrogenase	4085848..4086531	Pseudomonas mendocina ymp	5105697
YP_001189183.1	CDS	Pmen_3703	NC_009439.1	4086647	4087144	R	hypothetical protein	complement(4086647..4087144)	Pseudomonas mendocina ymp	5105698
YP_001189184.1	CDS	Pmen_3704	NC_009439.1	4087227	4087577	D	PFAM: regulatory protein, MerR; MerR family transcriptional regulator	4087227..4087577	Pseudomonas mendocina ymp	5105699
YP_001189185.1	CDS	Pmen_3705	NC_009439.1	4087704	4089059	D	catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase	4087704..4089059	Pseudomonas mendocina ymp	5105700
YP_001189186.1	CDS	Pmen_3706	NC_009439.1	4089164	4090111	D	catalyzes the formation of inosine from adenosine; adenosine deaminase	4089164..4090111	Pseudomonas mendocina ymp	5105701
YP_001189187.1	CDS	Pmen_3707	NC_009439.1	4090235	4090717	R	PFAM: protein of unknown function DUF461; hypothetical protein	complement(4090235..4090717)	Pseudomonas mendocina ymp	5105702
YP_001189188.1	CDS	Pmen_3708	NC_009439.1	4090878	4092308	R	hypothetical protein	complement(4090878..4092308)	Pseudomonas mendocina ymp	5105703
YP_001189189.1	CDS	Pmen_3709	NC_009439.1	4092305	4094350	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor	complement(4092305..4094350)	Pseudomonas mendocina ymp	5105704
YP_001189190.1	CDS	Pmen_3710	NC_009439.1	4094475	4094861	R	hypothetical protein	complement(4094475..4094861)	Pseudomonas mendocina ymp	5105705
YP_001189191.1	CDS	Pmen_3711	NC_009439.1	4094966	4095880	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(4094966..4095880)	Pseudomonas mendocina ymp	5105706
YP_001189192.1	CDS	Pmen_3712	NC_009439.1	4095997	4097013	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	4095997..4097013	Pseudomonas mendocina ymp	5105707
YP_001189193.1	CDS	Pmen_3713	NC_009439.1	4097230	4097403	D	hypothetical protein	4097230..4097403	Pseudomonas mendocina ymp	5105708
YP_001189194.1	CDS	Pmen_3714	NC_009439.1	4097583	4098221	R	PFAM: regulatory protein, TetR; Tetracycline transcriptional repressor MAATS-type, C-terminal domain protein; TetR family transcriptional regulator	complement(4097583..4098221)	Pseudomonas mendocina ymp	5105709
YP_001189195.1	CDS	Pmen_3715	NC_009439.1	4098402	4099550	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit	4098402..4099550	Pseudomonas mendocina ymp	5105710
YP_001189196.1	CDS	Pmen_3716	NC_009439.1	4099708	4102851	D	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein	4099708..4102851	Pseudomonas mendocina ymp	5105711
YP_001189197.1	CDS	Pmen_3717	NC_009439.1	4102848	4104281	D	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein	4102848..4104281	Pseudomonas mendocina ymp	5105712
YP_001189198.1	CDS	Pmen_3718	NC_009439.1	4104410	4105003	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase	complement(4104410..4105003)	Pseudomonas mendocina ymp	5105713
YP_001189199.1	CDS	Pmen_3719	NC_009439.1	4105000	4105869	R	TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II	complement(4105000..4105869)	Pseudomonas mendocina ymp	5105714
YP_001189200.1	CDS	Pmen_3720	NC_009439.1	4105850	4107472	R	hypothetical protein	complement(4105850..4107472)	Pseudomonas mendocina ymp	5105715
YP_001189201.1	CDS	Pmen_3721	NC_009439.1	4107469	4108029	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(4107469..4108029)	Pseudomonas mendocina ymp	5105716
YP_001189202.1	CDS	Pmen_3722	NC_009439.1	4108088	4109008	D	PFAM: histone deacetylase superfamily; histone deacetylase superfamily protein	4108088..4109008	Pseudomonas mendocina ymp	5105717
YP_001189203.1	CDS	Pmen_3723	NC_009439.1	4109012	4110142	R	PFAM: aminotransferase, class V; class V aminotransferase	complement(4109012..4110142)	Pseudomonas mendocina ymp	5105718
YP_001189204.1	CDS	Pmen_3724	NC_009439.1	4110256	4111497	D	PFAM: HI0933 family protein; hypothetical protein	4110256..4111497	Pseudomonas mendocina ymp	5105719
YP_001189205.1	CDS	Pmen_3725	NC_009439.1	4111679	4112680	D	PFAM: response regulator receiver; CheC, inhibitor of MCP methylation	4111679..4112680	Pseudomonas mendocina ymp	5105720
YP_001189206.1	CDS	Pmen_3726	NC_009439.1	4112685	4113122	D	PFAM: PAS fold-4 domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein	4112685..4113122	Pseudomonas mendocina ymp	5105721
YP_001189207.1	CDS	Pmen_3727	NC_009439.1	4113215	4113577	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	4113215..4113577	Pseudomonas mendocina ymp	5105722
YP_001189208.1	CDS	Pmen_3728	NC_009439.1	4113621	4114964	R	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase	complement(4113621..4114964)	Pseudomonas mendocina ymp	5105723
YP_001189209.1	CDS	Pmen_3729	NC_009439.1	4115090	4115689	R	TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon	complement(4115090..4115689)	Pseudomonas mendocina ymp	5105724
YP_001189210.1	CDS	Pmen_3730	NC_009439.1	4115697	4116176	R	PFAM: protein of unknown function DUF88; hypothetical protein	complement(4115697..4116176)	Pseudomonas mendocina ymp	5105725
YP_001189211.1	CDS	Pmen_3731	NC_009439.1	4116278	4116763	D	PFAM: YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein	4116278..4116763	Pseudomonas mendocina ymp	5105726
YP_001189212.1	CDS	Pmen_3732	NC_009439.1	4116825	4117490	D	PFAM: protein of unknown function UPF0259; hypothetical protein	4116825..4117490	Pseudomonas mendocina ymp	5105727
YP_001189213.1	CDS	Pmen_3733	NC_009439.1	4117525	4117962	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	4117525..4117962	Pseudomonas mendocina ymp	5105728
YP_001189214.1	CDS	Pmen_3734	NC_009439.1	4117970	4118713	R	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(4117970..4118713)	Pseudomonas mendocina ymp	5105729
YP_001189215.1	CDS	Pmen_3735	NC_009439.1	4118713	4119558	R	PFAM: short-chain dehydrogenase/reductase SDR; KR; short chain dehydrogenase	complement(4118713..4119558)	Pseudomonas mendocina ymp	5105730
YP_001189216.1	CDS	Pmen_3736	NC_009439.1	4119919	4121007	D	PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase	4119919..4121007	Pseudomonas mendocina ymp	5105731
YP_001189217.1	CDS	Pmen_3737	NC_009439.1	4121101	4121835	D	hypothetical protein	4121101..4121835	Pseudomonas mendocina ymp	5105732
YP_001189218.1	CDS	Pmen_3738	NC_009439.1	4121840	4122646	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; redoxin domain-containing protein	complement(4121840..4122646)	Pseudomonas mendocina ymp	5105733
YP_001189219.1	CDS	Pmen_3739	NC_009439.1	4122654	4125188	R	TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART: DEAD-like helicases-like; ATP-dependent helicase HrpB	complement(4122654..4125188)	Pseudomonas mendocina ymp	5105734
YP_001189220.1	CDS	Pmen_3740	NC_009439.1	4125320	4125739	D	hypothetical protein	4125320..4125739	Pseudomonas mendocina ymp	5105735
YP_001189221.1	CDS	Pmen_3741	NC_009439.1	4125744	4126622	D	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter	4125744..4126622	Pseudomonas mendocina ymp	5105736
YP_001189222.1	CDS	Pmen_3742	NC_009439.1	4126993	4127472	D	PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator	4126993..4127472	Pseudomonas mendocina ymp	5105737
YP_001189223.1	CDS	Pmen_3743	NC_009439.1	4127563	4127781	D	hypothetical protein	4127563..4127781	Pseudomonas mendocina ymp	5105738
YP_001189224.1	CDS	Pmen_3744	NC_009439.1	4127862	4128254	D	PFAM: globin; globin	4127862..4128254	Pseudomonas mendocina ymp	5105739
YP_001189225.1	CDS	Pmen_3745	NC_009439.1	4128460	4129080	R	PFAM: pseudouridine synthase; ribosomal large subunit pseudouridine synthase E	complement(4128460..4129080)	Pseudomonas mendocina ymp	5105740
YP_001189226.1	CDS	Pmen_3746	NC_009439.1	4129205	4130236	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	4129205..4130236	Pseudomonas mendocina ymp	5105741
YP_001189227.1	CDS	Pmen_3747	NC_009439.1	4130291	4130743	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	4130291..4130743	Pseudomonas mendocina ymp	5105742
YP_001189228.1	CDS	Pmen_3748	NC_009439.1	4130740	4132131	R	PFAM: aminotransferase, class V; regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator	complement(4130740..4132131)	Pseudomonas mendocina ymp	5105743
YP_001189229.1	CDS	Pmen_3749	NC_009439.1	4132161	4133132	D	PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; hypothetical protein	4132161..4133132	Pseudomonas mendocina ymp	5105744
YP_001189230.1	CDS	Pmen_3750	NC_009439.1	4133133	4134605	R	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase	complement(4133133..4134605)	Pseudomonas mendocina ymp	5105745
YP_001189231.1	CDS	Pmen_3751	NC_009439.1	4134739	4135476	D	hypothetical protein	4134739..4135476	Pseudomonas mendocina ymp	5105746
YP_001189232.1	CDS	Pmen_3752	NC_009439.1	4135487	4136170	R	hypothetical protein	complement(4135487..4136170)	Pseudomonas mendocina ymp	5105747
YP_001189233.1	CDS	Pmen_3753	NC_009439.1	4136707	4137450	D	PFAM: carbonic anhydrase; carbonate dehydratase	4136707..4137450	Pseudomonas mendocina ymp	5105748
YP_001189234.1	CDS	Pmen_3754	NC_009439.1	4139914	4140213	R	TIGRFAM: CRISPR-associated protein Cas2; hypothetical protein	complement(4139914..4140213)	Pseudomonas mendocina ymp	5105749
YP_001189235.1	CDS	Pmen_3755	NC_009439.1	4140213	4141127	R	TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein	complement(4140213..4141127)	Pseudomonas mendocina ymp	5105750
YP_001189236.1	CDS	Pmen_3756	NC_009439.1	4141127	4141741	R	TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein, CT1974; CRISPR-associated Cse3 family protein	complement(4141127..4141741)	Pseudomonas mendocina ymp	5105751
YP_001189237.1	CDS	Pmen_3757	NC_009439.1	4141716	4142378	R	TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; CRISPR-associated Cas5e family protein	complement(4141716..4142378)	Pseudomonas mendocina ymp	5105752
YP_001189238.1	CDS	Pmen_3758	NC_009439.1	4142381	4143535	R	TIGRFAM: CRISPR-associated protein, Cse4 family; CRISPR-associated Cse4 family protein	complement(4142381..4143535)	Pseudomonas mendocina ymp	5105753
YP_001189239.1	CDS	Pmen_3759	NC_009439.1	4143546	4144088	R	TIGRFAM: CRISPR-associated protein, Cse2 family; CRISPR-associated Cse2 family protein	complement(4143546..4144088)	Pseudomonas mendocina ymp	5105754
YP_001189240.1	CDS	Pmen_3760	NC_009439.1	4144085	4145662	R	TIGRFAM: CRISPR-associated protein, Cse1 family; CRISPR-associated Cse1 family protein	complement(4144085..4145662)	Pseudomonas mendocina ymp	5105755
YP_001189241.1	CDS	Pmen_3761	NC_009439.1	4145833	4146123	D	hypothetical protein	4145833..4146123	Pseudomonas mendocina ymp	5105756
YP_001189242.1	CDS	Pmen_3762	NC_009439.1	4146120	4146401	D	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; addiction module antitoxin	4146120..4146401	Pseudomonas mendocina ymp	5105757
YP_001189243.1	CDS	Pmen_3763	NC_009439.1	4146404	4149061	R	TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; CRISPR-associated helicase Cas3 family protein	complement(4146404..4149061)	Pseudomonas mendocina ymp	5105758
YP_001189244.1	CDS	Pmen_3764	NC_009439.1	4150247	4151896	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	complement(4150247..4151896)	Pseudomonas mendocina ymp	5105759
YP_001189245.1	CDS	Pmen_3765	NC_009439.1	4151893	4152534	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(4151893..4152534)	Pseudomonas mendocina ymp	5105760
YP_001189246.1	CDS	Pmen_3766	NC_009439.1	4152672	4155080	R	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; integral membrane sensor hybrid histidine kinase	complement(4152672..4155080)	Pseudomonas mendocina ymp	5105761
YP_001189247.1	CDS	Pmen_3767	NC_009439.1	4155318	4156208	R	PFAM: periplasmic binding protein; periplasmic binding protein	complement(4155318..4156208)	Pseudomonas mendocina ymp	5105762
YP_001189248.1	CDS	Pmen_3768	NC_009439.1	4156205	4158181	R	part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease	complement(4156205..4158181)	Pseudomonas mendocina ymp	5105763
YP_001189249.1	CDS	Pmen_3769	NC_009439.1	4158184	4158951	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(4158184..4158951)	Pseudomonas mendocina ymp	5105764
YP_001189250.1	CDS	Pmen_3770	NC_009439.1	4158945	4159691	R	hypothetical protein	complement(4158945..4159691)	Pseudomonas mendocina ymp	5105765
YP_001189251.1	CDS	Pmen_3771	NC_009439.1	4159782	4160942	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(4159782..4160942)	Pseudomonas mendocina ymp	5105766
YP_001189252.1	CDS	Pmen_3772	NC_009439.1	4161086	4161883	D	catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase	4161086..4161883	Pseudomonas mendocina ymp	5105767
YP_001189253.1	CDS	thiE	NC_009439.1	4161880	4162509	D	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase	4161880..4162509	Pseudomonas mendocina ymp	5105768
YP_001189254.1	CDS	Pmen_3774	NC_009439.1	4162532	4163821	D	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase	4162532..4163821	Pseudomonas mendocina ymp	5105769
YP_001189255.1	CDS	Pmen_3775	NC_009439.1	4163821	4164453	D	hypothetical protein	4163821..4164453	Pseudomonas mendocina ymp	5105770
YP_001189256.1	CDS	Pmen_3776	NC_009439.1	4164561	4165109	D	PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein	4164561..4165109	Pseudomonas mendocina ymp	5105771
YP_001189257.1	CDS	Pmen_3777	NC_009439.1	4165181	4165504	R	hypothetical protein	complement(4165181..4165504)	Pseudomonas mendocina ymp	5105772
YP_001189258.1	CDS	Pmen_3778	NC_009439.1	4165636	4166460	D	hypothetical protein	4165636..4166460	Pseudomonas mendocina ymp	5105773
YP_001189259.1	CDS	Pmen_3779	NC_009439.1	4166581	4167960	D	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase	4166581..4167960	Pseudomonas mendocina ymp	5106010
YP_001189260.1	CDS	Pmen_3780	NC_009439.1	4167987	4169039	D	PFAM: PhoH family protein; PhoH family protein	4167987..4169039	Pseudomonas mendocina ymp	5106011
YP_001189261.1	CDS	Pmen_3781	NC_009439.1	4169032	4169487	D	PFAM: protein of unknown function UPF0054; putative metalloprotease	4169032..4169487	Pseudomonas mendocina ymp	5106012
YP_001189262.1	CDS	Pmen_3782	NC_009439.1	4169519	4170358	D	PFAM: CBS domain containing protein; transporter-associated region; hypothetical protein	4169519..4170358	Pseudomonas mendocina ymp	5106013
YP_001189263.1	CDS	lnt	NC_009439.1	4170474	4171997	D	Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase	4170474..4171997	Pseudomonas mendocina ymp	5106014
YP_001189264.1	CDS	Pmen_3784	NC_009439.1	4172152	4172922	R	PFAM: protein of unknown function DUF218; hypothetical protein	complement(4172152..4172922)	Pseudomonas mendocina ymp	5106015
YP_001189265.1	CDS	Pmen_3785	NC_009439.1	4172946	4173374	R	hypothetical protein	complement(4172946..4173374)	Pseudomonas mendocina ymp	5106016
YP_001189266.1	CDS	leuS	NC_009439.1	4173445	4176165	D	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase	4173445..4176165	Pseudomonas mendocina ymp	5106017
YP_001189267.1	CDS	Pmen_3787	NC_009439.1	4176220	4176831	D	PFAM: Rare lipoprotein B; rare lipoprotein B	4176220..4176831	Pseudomonas mendocina ymp	5106018
YP_001189268.1	CDS	holA	NC_009439.1	4176887	4177915	D	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta	4176887..4177915	Pseudomonas mendocina ymp	5106019
YP_001189269.1	CDS	Pmen_3789	NC_009439.1	4178138	4178332	D	PFAM: protein of unknown function DUF331; hypothetical protein	4178138..4178332	Pseudomonas mendocina ymp	5106020
YP_001189270.1	CDS	Pmen_3790	NC_009439.1	4178366	4179622	D	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; lytic murein transglycosylase	4178366..4179622	Pseudomonas mendocina ymp	5106021
YP_001189271.1	CDS	Pmen_3791	NC_009439.1	4179786	4180838	D	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase	4179786..4180838	Pseudomonas mendocina ymp	5106022
YP_001189272.1	CDS	Pmen_3792	NC_009439.1	4180972	4181589	R	TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B	complement(4180972..4181589)	Pseudomonas mendocina ymp	5106023
YP_001189273.1	CDS	Pmen_3793	NC_009439.1	4181595	4181873	R	PFAM: protein of unknown function DUF493; hypothetical protein	complement(4181595..4181873)	Pseudomonas mendocina ymp	5106024
YP_001189274.1	CDS	Pmen_3794	NC_009439.1	4181938	4183098	R	PFAM: beta-lactamase; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase	complement(4181938..4183098)	Pseudomonas mendocina ymp	5106025
YP_001189275.1	CDS	Pmen_3795	NC_009439.1	4183212	4184225	R	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; rare lipoprotein A	complement(4183212..4184225)	Pseudomonas mendocina ymp	5106026
YP_001189276.1	CDS	Pmen_3796	NC_009439.1	4184222	4185232	R	TIGRFAM: lytic murein transglycosylase B; lytic murein transglycosylase B	complement(4184222..4185232)	Pseudomonas mendocina ymp	5106027
YP_001189277.1	CDS	Pmen_3797	NC_009439.1	4185250	4186395	R	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; rod shape-determining protein RodA	complement(4185250..4186395)	Pseudomonas mendocina ymp	5106028
YP_001189278.1	CDS	Pmen_3798	NC_009439.1	4186392	4188284	R	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase	complement(4186392..4188284)	Pseudomonas mendocina ymp	5106029
YP_001189279.1	CDS	Pmen_3799	NC_009439.1	4188291	4188758	R	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase	complement(4188291..4188758)	Pseudomonas mendocina ymp	5106030
YP_001189280.1	CDS	Pmen_3800	NC_009439.1	4188768	4189136	R	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein	complement(4188768..4189136)	Pseudomonas mendocina ymp	5106031
YP_001189281.1	CDS	nadD	NC_009439.1	4189186	4189845	R	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase	complement(4189186..4189845)	Pseudomonas mendocina ymp	5106032
YP_001189282.1	CDS	proA	NC_009439.1	4189846	4191111	R	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase	complement(4189846..4191111)	Pseudomonas mendocina ymp	5106033
YP_001189283.1	CDS	Pmen_3803	NC_009439.1	4191518	4192747	D	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	4191518..4192747	Pseudomonas mendocina ymp	5106034
YP_001189284.1	CDS	Pmen_3804	NC_009439.1	4192780	4193634	R	polyketide biosynthesis O-methyltransferase-like protein	complement(4192780..4193634)	Pseudomonas mendocina ymp	5106035
YP_001189285.1	CDS	Pmen_3805	NC_009439.1	4193689	4194417	D	responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase	4193689..4194417	Pseudomonas mendocina ymp	5106036
YP_001189286.1	CDS	Pmen_3806	NC_009439.1	4194414	4195730	D	PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase	4194414..4195730	Pseudomonas mendocina ymp	5106037
YP_001189287.1	CDS	Pmen_3807	NC_009439.1	4195740	4196324	R	PFAM: peptidase S16, lon domain protein; peptidase S16, lon domain-containing protein	complement(4195740..4196324)	Pseudomonas mendocina ymp	5106038
YP_001189288.1	CDS	Pmen_3808	NC_009439.1	4196332	4197048	R	PFAM: LrgB family protein; LrgB family protein	complement(4196332..4197048)	Pseudomonas mendocina ymp	5106039
YP_001189289.1	CDS	Pmen_3809	NC_009439.1	4197045	4197404	R	PFAM: LrgA family protein; LrgA family protein	complement(4197045..4197404)	Pseudomonas mendocina ymp	5106040
YP_001189290.1	CDS	Pmen_3810	NC_009439.1	4197655	4198110	D	PFAM: MaoC domain protein dehydratase; dehydratase	4197655..4198110	Pseudomonas mendocina ymp	5106041
YP_001189291.1	CDS	Pmen_3811	NC_009439.1	4198244	4199977	D	PFAM: MORN repeat-containing protein; MORN repeat-containing protein	4198244..4199977	Pseudomonas mendocina ymp	5106042
YP_001189292.1	CDS	Pmen_3812	NC_009439.1	4200008	4200649	D	PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase	4200008..4200649	Pseudomonas mendocina ymp	5106043
YP_001189293.1	CDS	Pmen_3813	NC_009439.1	4200666	4201007	D	hypothetical protein	4200666..4201007	Pseudomonas mendocina ymp	5106044
YP_001189294.1	CDS	Pmen_3814	NC_009439.1	4201011	4201622	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase	4201011..4201622	Pseudomonas mendocina ymp	5106045
YP_001189295.1	CDS	Pmen_3815	NC_009439.1	4201748	4202386	R	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; response regulator receiver protein	complement(4201748..4202386)	Pseudomonas mendocina ymp	5106046
YP_001189296.1	CDS	Pmen_3816	NC_009439.1	4202425	4204335	R	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase	complement(4202425..4204335)	Pseudomonas mendocina ymp	5106047
YP_001189297.1	CDS	Pmen_3817	NC_009439.1	4204477	4206096	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	4204477..4206096	Pseudomonas mendocina ymp	5106048
YP_001189298.1	CDS	Pmen_3818	NC_009439.1	4206207	4207580	D	hypothetical protein	4206207..4207580	Pseudomonas mendocina ymp	5106049
YP_001189299.1	CDS	Pmen_3819	NC_009439.1	4207640	4209412	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	4207640..4209412	Pseudomonas mendocina ymp	5106050
YP_001189300.1	CDS	Pmen_3820	NC_009439.1	4209667	4210845	D	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase	4209667..4210845	Pseudomonas mendocina ymp	5106051
YP_001189301.1	CDS	Pmen_3821	NC_009439.1	4210884	4211750	D	PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein	4210884..4211750	Pseudomonas mendocina ymp	5106052
YP_001189302.1	CDS	Pmen_3822	NC_009439.1	4211905	4212384	D	PFAM: YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein	4211905..4212384	Pseudomonas mendocina ymp	5106053
YP_001189303.1	CDS	Pmen_3823	NC_009439.1	4212486	4212773	R	PFAM: protein of unknown function DUF1375; hypothetical protein	complement(4212486..4212773)	Pseudomonas mendocina ymp	5106054
YP_001189304.1	CDS	Pmen_3824	NC_009439.1	4212770	4213060	R	hypothetical protein	complement(4212770..4213060)	Pseudomonas mendocina ymp	5106055
YP_001189305.1	CDS	Pmen_3825	NC_009439.1	4213069	4213698	R	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; aromatic acid decarboxylase	complement(4213069..4213698)	Pseudomonas mendocina ymp	5106056
YP_001189306.1	CDS	Pmen_3826	NC_009439.1	4213699	4215054	R	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramate	complement(4213699..4215054)	Pseudomonas mendocina ymp	5106057
YP_001189307.1	CDS	Pmen_3827	NC_009439.1	4215438	4215893	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	4215438..4215893	Pseudomonas mendocina ymp	5106058
YP_001189308.1	CDS	Pmen_3828	NC_009439.1	4215988	4216815	D	PFAM: protein of unknown function DUF980; hypothetical protein	4215988..4216815	Pseudomonas mendocina ymp	5106059
YP_001189309.1	CDS	Pmen_3829	NC_009439.1	4216893	4217420	D	catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase	4216893..4217420	Pseudomonas mendocina ymp	5106060
YP_001189310.1	CDS	Pmen_3830	NC_009439.1	4217716	4218750	D	hypothetical protein	4217716..4218750	Pseudomonas mendocina ymp	5106061
YP_001189311.1	CDS	Pmen_3832	NC_009439.1	4219034	4220608	D	PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase	4219034..4220608	Pseudomonas mendocina ymp	5107292
YP_001189312.1	CDS	Pmen_3833	NC_009439.1	4220633	4221361	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator	4220633..4221361	Pseudomonas mendocina ymp	5106063
YP_001189313.1	CDS	Pmen_3834	NC_009439.1	4221358	4222587	R	PFAM: amidohydrolase; Amidohydrolase 3; amidohydrolase 3	complement(4221358..4222587)	Pseudomonas mendocina ymp	5106064
YP_001189314.1	CDS	Pmen_3835	NC_009439.1	4222584	4225076	R	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(4222584..4225076)	Pseudomonas mendocina ymp	5106065
YP_001189315.1	CDS	Pmen_3836	NC_009439.1	4225073	4225942	R	PFAM: inner-membrane translocator; inner-membrane translocator	complement(4225073..4225942)	Pseudomonas mendocina ymp	5106066
YP_001189316.1	CDS	Pmen_3837	NC_009439.1	4225986	4227173	R	PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor	complement(4225986..4227173)	Pseudomonas mendocina ymp	5106067
YP_001189317.1	CDS	Pmen_3838	NC_009439.1	4227338	4227736	D	hypothetical protein	4227338..4227736	Pseudomonas mendocina ymp	5106068
YP_001189318.1	CDS	Pmen_3839	NC_009439.1	4227821	4228591	D	PFAM: protein of unknown function DUF81; hypothetical protein	4227821..4228591	Pseudomonas mendocina ymp	5106069
YP_001189319.1	CDS	Pmen_3840	NC_009439.1	4228607	4229005	D	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; exodeoxyribonuclease VII small subunit	4228607..4229005	Pseudomonas mendocina ymp	5106070
YP_001189320.1	CDS	Pmen_3841	NC_009439.1	4229002	4229889	D	PFAM: Polyprenyl synthetase; farnesyl-diphosphate synthase	4229002..4229889	Pseudomonas mendocina ymp	5106071
YP_001189321.1	CDS	Pmen_3842	NC_009439.1	4230034	4233306	D	PFAM: carboxyl transferase; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxylase., propionyl-CoA carboxylase	4230034..4233306	Pseudomonas mendocina ymp	5106072
YP_001189322.1	CDS	Pmen_3843	NC_009439.1	4233317	4234267	D	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	4233317..4234267	Pseudomonas mendocina ymp	5106073
YP_001189323.1	CDS	Pmen_3844	NC_009439.1	4234350	4236245	D	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase	4234350..4236245	Pseudomonas mendocina ymp	5106074
YP_001189324.1	CDS	Pmen_3845	NC_009439.1	4236609	4238495	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug	4236609..4238495	Pseudomonas mendocina ymp	5106075
YP_001189325.1	CDS	Pmen_3846	NC_009439.1	4238561	4239355	R	PFAM: periplasmic binding protein; periplasmic binding protein	complement(4238561..4239355)	Pseudomonas mendocina ymp	5106076
YP_001189326.1	CDS	Pmen_3847	NC_009439.1	4239357	4239770	R	hypothetical protein	complement(4239357..4239770)	Pseudomonas mendocina ymp	5106077
YP_001189327.1	CDS	ribA	NC_009439.1	4239767	4240426	R	catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II	complement(4239767..4240426)	Pseudomonas mendocina ymp	5106078
YP_001189328.1	CDS	Pmen_3849	NC_009439.1	4240499	4241143	R	aspartyl protease-like protein	complement(4240499..4241143)	Pseudomonas mendocina ymp	5106079
YP_001189329.1	CDS	Pmen_3850	NC_009439.1	4241162	4241932	R	hypothetical protein	complement(4241162..4241932)	Pseudomonas mendocina ymp	5106080
YP_001189330.1	CDS	Pmen_3851	NC_009439.1	4241910	4242443	R	PFAM: phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase	complement(4241910..4242443)	Pseudomonas mendocina ymp	5106081
YP_001189331.1	CDS	Pmen_3852	NC_009439.1	4242453	4243406	R	catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase	complement(4242453..4243406)	Pseudomonas mendocina ymp	5106082
YP_001189332.1	CDS	nusB	NC_009439.1	4243403	4243882	R	Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB	complement(4243403..4243882)	Pseudomonas mendocina ymp	5106083
YP_001189333.1	CDS	ribH	NC_009439.1	4243879	4244355	R	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase	complement(4243879..4244355)	Pseudomonas mendocina ymp	5106084
YP_001189334.1	CDS	Pmen_3855	NC_009439.1	4244624	4245703	R	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein	complement(4244624..4245703)	Pseudomonas mendocina ymp	5106085
YP_001189335.1	CDS	Pmen_3856	NC_009439.1	4245716	4246378	R	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha	complement(4245716..4246378)	Pseudomonas mendocina ymp	5106086
YP_001189336.1	CDS	Pmen_3857	NC_009439.1	4246834	4247949	R	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase	complement(4246834..4247949)	Pseudomonas mendocina ymp	5106087
YP_001189337.1	CDS	nrdR	NC_009439.1	4247946	4248413	R	PFAM: ATP-cone domain protein; transcriptional regulator NrdR	complement(4247946..4248413)	Pseudomonas mendocina ymp	5106088
YP_001189338.1	CDS	Pmen_3859	NC_009439.1	4248525	4248977	D	hypothetical protein	4248525..4248977	Pseudomonas mendocina ymp	5106393
YP_001189339.1	CDS	Pmen_3860	NC_009439.1	4248974	4249633	D	PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 12; type 12 methyltransferase	4248974..4249633	Pseudomonas mendocina ymp	5106394
YP_001189340.1	CDS	Pmen_3861	NC_009439.1	4249688	4250560	D	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin	4249688..4250560	Pseudomonas mendocina ymp	5106395
YP_001189341.1	CDS	Pmen_3862	NC_009439.1	4250682	4251020	R	hypothetical protein	complement(4250682..4251020)	Pseudomonas mendocina ymp	5106396
YP_001189342.1	CDS	Pmen_3863	NC_009439.1	4251134	4251712	D	hypothetical protein	4251134..4251712	Pseudomonas mendocina ymp	5106397
YP_001189343.1	CDS	Pmen_3864	NC_009439.1	4251812	4252519	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	4251812..4252519	Pseudomonas mendocina ymp	5106398
YP_001189344.1	CDS	Pmen_3865	NC_009439.1	4252521	4253786	D	PFAM: protein of unknown function DUF214; hypothetical protein	4252521..4253786	Pseudomonas mendocina ymp	5106399
YP_001189345.1	CDS	Pmen_3866	NC_009439.1	4253845	4254366	D	hypothetical protein	4253845..4254366	Pseudomonas mendocina ymp	5106400
YP_001189346.1	CDS	Pmen_3867	NC_009439.1	4254600	4255697	R	hypothetical protein	complement(4254600..4255697)	Pseudomonas mendocina ymp	5106401
YP_001189347.1	CDS	Pmen_3868	NC_009439.1	4255700	4256383	R	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; TonB family protein	complement(4255700..4256383)	Pseudomonas mendocina ymp	5106402
YP_001189348.1	CDS	Pmen_3869	NC_009439.1	4256383	4256793	R	PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR	complement(4256383..4256793)	Pseudomonas mendocina ymp	5106403
YP_001189349.1	CDS	Pmen_3870	NC_009439.1	4256805	4257353	R	PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel	complement(4256805..4257353)	Pseudomonas mendocina ymp	5106404
YP_001189350.1	CDS	Pmen_3871	NC_009439.1	4257346	4258695	R	PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel	complement(4257346..4258695)	Pseudomonas mendocina ymp	5106405
YP_001189351.1	CDS	Pmen_3872	NC_009439.1	4258692	4259465	R	hypothetical protein	complement(4258692..4259465)	Pseudomonas mendocina ymp	5106406
YP_001189352.1	CDS	Pmen_3873	NC_009439.1	4259658	4260341	D	PFAM: OmpW family protein; OmpW family protein	4259658..4260341	Pseudomonas mendocina ymp	5106407
YP_001189353.1	CDS	Pmen_3874	NC_009439.1	4260573	4261493	R	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase	complement(4260573..4261493)	Pseudomonas mendocina ymp	5106408
YP_001189354.1	CDS	Pmen_3875	NC_009439.1	4261486	4262370	R	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase	complement(4261486..4262370)	Pseudomonas mendocina ymp	5106409
YP_001189355.1	CDS	Pmen_3876	NC_009439.1	4262389	4262877	R	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein	complement(4262389..4262877)	Pseudomonas mendocina ymp	5106410
YP_001189356.1	CDS	Pmen_3877	NC_009439.1	4262887	4264281	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(4262887..4264281)	Pseudomonas mendocina ymp	5106411
YP_001189357.1	CDS	uvrA	NC_009439.1	4264416	4267256	D	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A	4264416..4267256	Pseudomonas mendocina ymp	5106412
YP_001189358.1	CDS	Pmen_3879	NC_009439.1	4267356	4268624	D	PFAM: peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A	4267356..4268624	Pseudomonas mendocina ymp	5106413
YP_001189359.1	CDS	Pmen_3880	NC_009439.1	4268779	4269243	R	TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; bacterioferritin	complement(4268779..4269243)	Pseudomonas mendocina ymp	5106414
YP_001189360.1	CDS	Pmen_3881	NC_009439.1	4269361	4271511	R	TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI	complement(4269361..4271511)	Pseudomonas mendocina ymp	5106415
YP_001189361.1	CDS	Pmen_3882	NC_009439.1	4271694	4273073	R	PFAM: Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC	complement(4271694..4273073)	Pseudomonas mendocina ymp	5106416
YP_001189362.1	CDS	rplQ	NC_009439.1	4273274	4273660	R	is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17	complement(4273274..4273660)	Pseudomonas mendocina ymp	5106417
YP_001189363.1	CDS	Pmen_3884	NC_009439.1	4273705	4274706	R	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha	complement(4273705..4274706)	Pseudomonas mendocina ymp	5106418
YP_001189364.1	CDS	rpsD	NC_009439.1	4274729	4275349	R	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4	complement(4274729..4275349)	Pseudomonas mendocina ymp	5106419
YP_001189365.1	CDS	Pmen_3886	NC_009439.1	4275367	4275756	R	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11	complement(4275367..4275756)	Pseudomonas mendocina ymp	5106420
YP_001189366.1	CDS	rpsM	NC_009439.1	4275787	4276143	R	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13	complement(4275787..4276143)	Pseudomonas mendocina ymp	5106421
YP_001189367.1	CDS	rpmJ	NC_009439.1	4276277	4276393	R	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36	complement(4276277..4276393)	Pseudomonas mendocina ymp	5106422
YP_001189368.1	CDS	secY	NC_009439.1	4276422	4277750	R	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY	complement(4276422..4277750)	Pseudomonas mendocina ymp	5106423
YP_001189369.1	CDS	rplO	NC_009439.1	4277751	4278182	R	late assembly protein; 50S ribosomal protein L15	complement(4277751..4278182)	Pseudomonas mendocina ymp	5106424
YP_001189370.1	CDS	rpmD	NC_009439.1	4278185	4278364	R	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30	complement(4278185..4278364)	Pseudomonas mendocina ymp	5106425
YP_001189371.1	CDS	rpsE	NC_009439.1	4278367	4278867	R	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5	complement(4278367..4278867)	Pseudomonas mendocina ymp	5106426
YP_001189372.1	CDS	rplR	NC_009439.1	4278871	4279221	R	binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18	complement(4278871..4279221)	Pseudomonas mendocina ymp	5106427
YP_001189373.1	CDS	rplF	NC_009439.1	4279233	4279766	R	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6	complement(4279233..4279766)	Pseudomonas mendocina ymp	5106428
YP_001189374.1	CDS	rpsH	NC_009439.1	4279779	4280171	R	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8	complement(4279779..4280171)	Pseudomonas mendocina ymp	5106429
YP_001189375.1	CDS	rpsN	NC_009439.1	4280364	4280669	R	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14	complement(4280364..4280669)	Pseudomonas mendocina ymp	5106430
YP_001189376.1	CDS	rplE	NC_009439.1	4280685	4281224	R	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5	complement(4280685..4281224)	Pseudomonas mendocina ymp	5106431
YP_001189377.1	CDS	rplX	NC_009439.1	4281244	4281558	R	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24	complement(4281244..4281558)	Pseudomonas mendocina ymp	5106432
YP_001189378.1	CDS	rplN	NC_009439.1	4281570	4281938	R	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14	complement(4281570..4281938)	Pseudomonas mendocina ymp	5106433
YP_001189379.1	CDS	rpsQ	NC_009439.1	4281962	4282228	R	primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17	complement(4281962..4282228)	Pseudomonas mendocina ymp	5106434
YP_001189380.1	CDS	Pmen_3901	NC_009439.1	4282231	4282422	R	one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29	complement(4282231..4282422)	Pseudomonas mendocina ymp	5106435
YP_001189381.1	CDS	rplP	NC_009439.1	4282422	4282835	R	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16	complement(4282422..4282835)	Pseudomonas mendocina ymp	5106436
YP_001189382.1	CDS	rpsC	NC_009439.1	4282848	4283534	R	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3	complement(4282848..4283534)	Pseudomonas mendocina ymp	5106437
YP_001189383.1	CDS	rplV	NC_009439.1	4283548	4283880	R	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22	complement(4283548..4283880)	Pseudomonas mendocina ymp	5106438
YP_001189384.1	CDS	rpsS	NC_009439.1	4283892	4284167	R	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19	complement(4283892..4284167)	Pseudomonas mendocina ymp	5106439
YP_001189385.1	CDS	rplB	NC_009439.1	4284184	4285008	R	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2	complement(4284184..4285008)	Pseudomonas mendocina ymp	5106440
YP_001189386.1	CDS	rplW	NC_009439.1	4285023	4285322	R	binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23	complement(4285023..4285322)	Pseudomonas mendocina ymp	5106441
YP_001189387.1	CDS	rplD	NC_009439.1	4285319	4285921	R	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4	complement(4285319..4285921)	Pseudomonas mendocina ymp	5106442
YP_001189388.1	CDS	rplC	NC_009439.1	4285936	4286565	R	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3	complement(4285936..4286565)	Pseudomonas mendocina ymp	5106443
YP_001189389.1	CDS	rpsJ	NC_009439.1	4286649	4286960	R	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10	complement(4286649..4286960)	Pseudomonas mendocina ymp	5106444
YP_001189390.1	CDS	Pmen_3911	NC_009439.1	4287116	4288309	R	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	complement(4287116..4288309)	Pseudomonas mendocina ymp	5106445
YP_001189391.1	CDS	Pmen_3912	NC_009439.1	4288340	4290487	R	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G	complement(4288340..4290487)	Pseudomonas mendocina ymp	5106446
YP_001189392.1	CDS	Pmen_3913	NC_009439.1	4290518	4290988	R	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7	complement(4290518..4290988)	Pseudomonas mendocina ymp	5106447
YP_001189393.1	CDS	rpsL	NC_009439.1	4291093	4291464	R	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12	complement(4291093..4291464)	Pseudomonas mendocina ymp	5106448
YP_001189394.1	CDS	Pmen_3915	NC_009439.1	4291611	4295810	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta'	complement(4291611..4295810)	Pseudomonas mendocina ymp	5106449
YP_001189395.1	CDS	rpoB	NC_009439.1	4295874	4299947	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta	complement(4295874..4299947)	Pseudomonas mendocina ymp	5106450
YP_001189396.1	CDS	rplL	NC_009439.1	4300170	4300541	R	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12	complement(4300170..4300541)	Pseudomonas mendocina ymp	5106451
YP_001189397.1	CDS	rplJ	NC_009439.1	4300622	4301122	R	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10	complement(4300622..4301122)	Pseudomonas mendocina ymp	5106452
YP_001189398.1	CDS	rplA	NC_009439.1	4301334	4302029	R	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1	complement(4301334..4302029)	Pseudomonas mendocina ymp	5106453
YP_001189399.1	CDS	rplK	NC_009439.1	4302029	4302460	R	binds directly to 23S ribosomal RNA; 50S ribosomal protein L11	complement(4302029..4302460)	Pseudomonas mendocina ymp	5106454
YP_001189400.1	CDS	nusG	NC_009439.1	4302579	4303112	R	Modulates Rho-dependent transcription termination; transcription antitermination protein NusG	complement(4302579..4303112)	Pseudomonas mendocina ymp	5106455
YP_001189401.1	CDS	secE	NC_009439.1	4303122	4303490	R	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE	complement(4303122..4303490)	Pseudomonas mendocina ymp	5106456
YP_001189402.1	CDS	Pmen_3923	NC_009439.1	4303662	4304855	R	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	complement(4303662..4304855)	Pseudomonas mendocina ymp	5107293
YP_001189403.1	CDS	Pmen_3924	NC_009439.1	4305366	4306043	R	PFAM: Sporulation domain protein; sporulation domain-containing protein	complement(4305366..4306043)	Pseudomonas mendocina ymp	5107296
YP_001189404.1	CDS	Pmen_3925	NC_009439.1	4306052	4306798	R	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase	complement(4306052..4306798)	Pseudomonas mendocina ymp	5106459
YP_001189405.1	CDS	Pmen_3926	NC_009439.1	4306788	4307753	R	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase	complement(4306788..4307753)	Pseudomonas mendocina ymp	5106460
YP_001189406.1	CDS	Pmen_3927	NC_009439.1	4313865	4315064	R	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase	complement(4313865..4315064)	Pseudomonas mendocina ymp	5107301
YP_001189407.1	CDS	Pmen_3928	NC_009439.1	4315247	4316674	D	PFAM: peptidase M23B; Opacity-associated protein A; peptidase M23B	4315247..4316674	Pseudomonas mendocina ymp	5106462
YP_001189408.1	CDS	anmK	NC_009439.1	4316678	4317769	D	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase	4316678..4317769	Pseudomonas mendocina ymp	5106463
YP_001189409.1	CDS	Pmen_3930	NC_009439.1	4317819	4318169	R	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA	complement(4317819..4318169)	Pseudomonas mendocina ymp	5106464
YP_001189410.1	CDS	Pmen_3931	NC_009439.1	4318243	4318653	R	PFAM: protein of unknown function DUF583; hypothetical protein	complement(4318243..4318653)	Pseudomonas mendocina ymp	5106465
YP_001189411.1	CDS	Pmen_3932	NC_009439.1	4318660	4319385	R	hypothetical protein	complement(4318660..4319385)	Pseudomonas mendocina ymp	5106466
YP_001189412.1	CDS	argC	NC_009439.1	4319382	4320416	R	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase	complement(4319382..4320416)	Pseudomonas mendocina ymp	5106467
YP_001189413.1	CDS	Pmen_3934	NC_009439.1	4320553	4320981	D	PFAM: conserved hypothetical protein 701; hypothetical protein	4320553..4320981	Pseudomonas mendocina ymp	5106468
YP_001189414.1	CDS	Pmen_3935	NC_009439.1	4320992	4321954	D	PFAM: 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase	4320992..4321954	Pseudomonas mendocina ymp	5106469
YP_001189415.1	CDS	Pmen_3936	NC_009439.1	4321951	4323213	D	PFAM: alanine racemase domain protein; alanine racemase domain-containing protein	4321951..4323213	Pseudomonas mendocina ymp	5106470
YP_001189416.1	CDS	Pmen_3937	NC_009439.1	4323314	4324270	D	PFAM: protein of unknown function DUF805; hypothetical protein	4323314..4324270	Pseudomonas mendocina ymp	5106471
YP_001189417.1	CDS	Pmen_3938	NC_009439.1	4324280	4325068	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	4324280..4325068	Pseudomonas mendocina ymp	5110161
YP_001189418.1	CDS	Pmen_3939	NC_009439.1	4325076	4326557	R	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; ATPase central domain-containing protein	complement(4325076..4326557)	Pseudomonas mendocina ymp	5110162
YP_001189419.1	CDS	Pmen_3940	NC_009439.1	4326679	4327512	D	PFAM: protein of unknown function DUF323; hypothetical protein	4326679..4327512	Pseudomonas mendocina ymp	5110163
YP_001189420.1	CDS	Pmen_3941	NC_009439.1	4327580	4328227	D	ubiquinone biosynthesis protein COQ7-like protein	4327580..4328227	Pseudomonas mendocina ymp	5110164
YP_001189421.1	CDS	Pmen_3942	NC_009439.1	4328277	4328699	R	PFAM: OsmC family protein; OsmC family protein	complement(4328277..4328699)	Pseudomonas mendocina ymp	5110165
YP_001189422.1	CDS	Pmen_3943	NC_009439.1	4328933	4329577	D	complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein	4328933..4329577	Pseudomonas mendocina ymp	5110166
YP_001189423.1	CDS	trpC	NC_009439.1	4329623	4330462	R	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Indole-3-glycerol phosphate synthase	complement(4329623..4330462)	Pseudomonas mendocina ymp	5110167
YP_001189424.1	CDS	trpD	NC_009439.1	4330459	4331505	R	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase	complement(4330459..4331505)	Pseudomonas mendocina ymp	5110168
YP_001189425.1	CDS	Pmen_3946	NC_009439.1	4331502	4332098	R	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II	complement(4331502..4332098)	Pseudomonas mendocina ymp	5110169
YP_001189426.1	CDS	Pmen_3947	NC_009439.1	4332452	4332961	D	hypothetical protein	4332452..4332961	Pseudomonas mendocina ymp	5110170
YP_001189427.1	CDS	Pmen_3948	NC_009439.1	4332978	4333673	D	PFAM: protein of unknown function DUF159; hypothetical protein	4332978..4333673	Pseudomonas mendocina ymp	5110171
YP_001189428.1	CDS	Pmen_3949	NC_009439.1	4333681	4333947	R	hypothetical protein	complement(4333681..4333947)	Pseudomonas mendocina ymp	5110172
YP_001189429.1	CDS	Pmen_3950	NC_009439.1	4334162	4334632	R	hypothetical protein	complement(4334162..4334632)	Pseudomonas mendocina ymp	5110173
YP_001189430.1	CDS	Pmen_3951	NC_009439.1	4334629	4335075	R	hypothetical protein	complement(4334629..4335075)	Pseudomonas mendocina ymp	5110174
YP_001189431.1	CDS	Pmen_3952	NC_009439.1	4335386	4335814	R	hypothetical protein	complement(4335386..4335814)	Pseudomonas mendocina ymp	5110175
YP_001189432.1	CDS	Pmen_3953	NC_009439.1	4335811	4336779	R	hypothetical protein	complement(4335811..4336779)	Pseudomonas mendocina ymp	5110176
YP_001189433.1	CDS	Pmen_3954	NC_009439.1	4336779	4337297	R	hypothetical protein	complement(4336779..4337297)	Pseudomonas mendocina ymp	5110177
YP_001189434.1	CDS	Pmen_3955	NC_009439.1	4337303	4337809	R	hypothetical protein	complement(4337303..4337809)	Pseudomonas mendocina ymp	5110178
YP_001189435.1	CDS	Pmen_3956	NC_009439.1	4337799	4338371	R	hypothetical protein	complement(4337799..4338371)	Pseudomonas mendocina ymp	5110179
YP_001189436.1	CDS	Pmen_3957	NC_009439.1	4338408	4339322	R	hypothetical protein	complement(4338408..4339322)	Pseudomonas mendocina ymp	5110180
YP_001189437.1	CDS	Pmen_3958	NC_009439.1	4339322	4340938	R	hypothetical protein	complement(4339322..4340938)	Pseudomonas mendocina ymp	5110181
YP_001189438.1	CDS	Pmen_3959	NC_009439.1	4340935	4341384	R	hypothetical protein	complement(4340935..4341384)	Pseudomonas mendocina ymp	5110182
YP_001189439.1	CDS	Pmen_3960	NC_009439.1	4341387	4343108	R	hypothetical protein	complement(4341387..4343108)	Pseudomonas mendocina ymp	5110183
YP_001189440.1	CDS	Pmen_3961	NC_009439.1	4343112	4343615	R	hypothetical protein	complement(4343112..4343615)	Pseudomonas mendocina ymp	5110184
YP_001189441.1	CDS	Pmen_3962	NC_009439.1	4343654	4345669	R	hypothetical protein	complement(4343654..4345669)	Pseudomonas mendocina ymp	5110185
YP_001189442.1	CDS	Pmen_3963	NC_009439.1	4345669	4345818	R	hypothetical protein	complement(4345669..4345818)	Pseudomonas mendocina ymp	5110186
YP_001189443.1	CDS	Pmen_3964	NC_009439.1	4345845	4346207	R	hypothetical protein	complement(4345845..4346207)	Pseudomonas mendocina ymp	5110187
YP_001189444.1	CDS	Pmen_3965	NC_009439.1	4346731	4347516	R	hypothetical protein	complement(4346731..4347516)	Pseudomonas mendocina ymp	5110188
YP_001189445.1	CDS	Pmen_3966	NC_009439.1	4347540	4347986	R	hypothetical protein	complement(4347540..4347986)	Pseudomonas mendocina ymp	5110189
YP_001189446.1	CDS	Pmen_3967	NC_009439.1	4347990	4348577	R	hypothetical protein	complement(4347990..4348577)	Pseudomonas mendocina ymp	5110190
YP_001189447.1	CDS	Pmen_3968	NC_009439.1	4348574	4349125	R	hypothetical protein	complement(4348574..4349125)	Pseudomonas mendocina ymp	5110191
YP_001189448.1	CDS	Pmen_3969	NC_009439.1	4349128	4349658	R	hypothetical protein	complement(4349128..4349658)	Pseudomonas mendocina ymp	5110192
YP_001189449.1	CDS	Pmen_3970	NC_009439.1	4349925	4351166	R	TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; HK97 family phage major capsid protein	complement(4349925..4351166)	Pseudomonas mendocina ymp	5110193
YP_001189450.1	CDS	Pmen_3971	NC_009439.1	4351237	4351887	R	PFAM: peptidase S14, ClpP; peptidase S14, ClpP	complement(4351237..4351887)	Pseudomonas mendocina ymp	5110194
YP_001189451.1	CDS	Pmen_3972	NC_009439.1	4351907	4353142	R	TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; HK97 family phage portal protein	complement(4351907..4353142)	Pseudomonas mendocina ymp	5110195
YP_001189452.1	CDS	Pmen_3973	NC_009439.1	4353210	4354916	R	PFAM: phage Terminase; phage terminase	complement(4353210..4354916)	Pseudomonas mendocina ymp	5110196
YP_001189453.1	CDS	Pmen_3974	NC_009439.1	4354900	4355421	R	hypothetical protein	complement(4354900..4355421)	Pseudomonas mendocina ymp	5110197
YP_001189454.1	CDS	Pmen_3975	NC_009439.1	4355556	4355939	R	PFAM: HNH endonuclease; HNH endonuclease	complement(4355556..4355939)	Pseudomonas mendocina ymp	5110198
YP_001189455.1	CDS	Pmen_3976	NC_009439.1	4355942	4356376	R	TIGRFAM: phage holin, lambda family; PFAM: Holin, phage lambda; phage holin	complement(4355942..4356376)	Pseudomonas mendocina ymp	5110199
YP_001189456.1	CDS	Pmen_3977	NC_009439.1	4356877	4357245	R	hypothetical protein	complement(4356877..4357245)	Pseudomonas mendocina ymp	5110200
YP_001189457.1	CDS	Pmen_3978	NC_009439.1	4357242	4359476	R	PFAM: virulence-associated E family protein; virulence-associated E family protein	complement(4357242..4359476)	Pseudomonas mendocina ymp	5110201
YP_001189458.1	CDS	Pmen_3979	NC_009439.1	4359469	4359861	R	hypothetical protein	complement(4359469..4359861)	Pseudomonas mendocina ymp	5110202
YP_001189459.1	CDS	Pmen_3980	NC_009439.1	4359858	4360076	R	TraR/DksA family transcriptional regulator	complement(4359858..4360076)	Pseudomonas mendocina ymp	5110203
YP_001189460.1	CDS	Pmen_3981	NC_009439.1	4360069	4360581	R	hypothetical protein	complement(4360069..4360581)	Pseudomonas mendocina ymp	5110204
YP_001189461.1	CDS	Pmen_3982	NC_009439.1	4360989	4361216	R	PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein	complement(4360989..4361216)	Pseudomonas mendocina ymp	5110205
YP_001189462.1	CDS	Pmen_3983	NC_009439.1	4361321	4362043	D	PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B; putative phage repressor	4361321..4362043	Pseudomonas mendocina ymp	5110206
YP_001189463.1	CDS	Pmen_3984	NC_009439.1	4362278	4362547	D	hypothetical protein	4362278..4362547	Pseudomonas mendocina ymp	5110207
YP_001189464.1	CDS	Pmen_3985	NC_009439.1	4362544	4363140	D	hypothetical protein	4362544..4363140	Pseudomonas mendocina ymp	5110208
YP_001189465.1	CDS	Pmen_3986	NC_009439.1	4363151	4363441	D	hypothetical protein	4363151..4363441	Pseudomonas mendocina ymp	5110209
YP_001189466.1	CDS	Pmen_3987	NC_009439.1	4363598	4364071	D	hypothetical protein	4363598..4364071	Pseudomonas mendocina ymp	5110210
YP_001189467.1	CDS	Pmen_3988	NC_009439.1	4364068	4364397	D	hypothetical protein	4364068..4364397	Pseudomonas mendocina ymp	5110211
YP_001189468.1	CDS	Pmen_3989	NC_009439.1	4364394	4364657	D	hypothetical protein	4364394..4364657	Pseudomonas mendocina ymp	5110212
YP_001189469.1	CDS	Pmen_3990	NC_009439.1	4364732	4365418	D	hypothetical protein	4364732..4365418	Pseudomonas mendocina ymp	5110213
YP_001189470.1	CDS	Pmen_3991	NC_009439.1	4365415	4365960	D	hypothetical protein	4365415..4365960	Pseudomonas mendocina ymp	5110214
YP_001189471.1	CDS	Pmen_3992	NC_009439.1	4365957	4366865	D	hypothetical protein	4365957..4366865	Pseudomonas mendocina ymp	5110215
YP_001189472.1	CDS	Pmen_3993	NC_009439.1	4367147	4367809	R	hypothetical protein	complement(4367147..4367809)	Pseudomonas mendocina ymp	5110216
YP_001189473.1	CDS	Pmen_3994	NC_009439.1	4367884	4368120	D	PFAM: Prophage CP4-57 regulatory; phage transcriptional regulator AlpA	4367884..4368120	Pseudomonas mendocina ymp	5110217
YP_001189474.1	CDS	Pmen_3995	NC_009439.1	4368134	4368490	R	hypothetical protein	complement(4368134..4368490)	Pseudomonas mendocina ymp	5110218
YP_001189475.1	CDS	Pmen_3996	NC_009439.1	4368492	4369661	R	PFAM: phage integrase family protein; phage integrase family protein	complement(4368492..4369661)	Pseudomonas mendocina ymp	5110219
YP_001189476.1	CDS	Pmen_3997	NC_009439.1	4369858	4371348	R	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I	complement(4369858..4371348)	Pseudomonas mendocina ymp	5110220
YP_001189477.1	CDS	Pmen_3998	NC_009439.1	4371619	4372299	R	TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase	complement(4371619..4372299)	Pseudomonas mendocina ymp	5110221
YP_001189478.1	CDS	Pmen_3999	NC_009439.1	4372296	4372970	R	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase	complement(4372296..4372970)	Pseudomonas mendocina ymp	5110222
YP_001189479.1	CDS	Pmen_4000	NC_009439.1	4373123	4373950	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(4373123..4373950)	Pseudomonas mendocina ymp	5110223
YP_001189480.1	CDS	Pmen_4001	NC_009439.1	4374108	4375355	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(4374108..4375355)	Pseudomonas mendocina ymp	5110224
YP_001189481.1	CDS	Pmen_4002	NC_009439.1	4375564	4376595	R	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	complement(4375564..4376595)	Pseudomonas mendocina ymp	5110225
YP_001189482.1	CDS	Pmen_4003	NC_009439.1	4376649	4377746	R	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase	complement(4376649..4377746)	Pseudomonas mendocina ymp	5110226
YP_001189483.1	CDS	Pmen_4004	NC_009439.1	4378048	4378677	R	PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator	complement(4378048..4378677)	Pseudomonas mendocina ymp	5110227
YP_001189484.1	CDS	Pmen_4005	NC_009439.1	4378674	4381079	R	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein, family 3; multi-sensor signal transduction histidine kinase	complement(4378674..4381079)	Pseudomonas mendocina ymp	5110228
YP_001189485.1	CDS	Pmen_4006	NC_009439.1	4381193	4382170	D	hypothetical protein	4381193..4382170	Pseudomonas mendocina ymp	5110229
YP_001189486.1	CDS	Pmen_4007	NC_009439.1	4382167	4382928	R	PFAM: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein	complement(4382167..4382928)	Pseudomonas mendocina ymp	5110230
YP_001189487.1	CDS	Pmen_4008	NC_009439.1	4382929	4383600	R	PFAM: Nucleotidyl transferase; nucleotidyl transferase	complement(4382929..4383600)	Pseudomonas mendocina ymp	5110231
YP_001189488.1	CDS	Pmen_4009	NC_009439.1	4383597	4384622	R	PFAM: aminoglycoside phosphotransferase; aminoglycoside phosphotransferase	complement(4383597..4384622)	Pseudomonas mendocina ymp	5110232
YP_001189489.1	CDS	Pmen_4010	NC_009439.1	4384747	4387563	D	PFAM: OstA family protein; Organic solvent tolerance protein; organic solvent tolerance protein	4384747..4387563	Pseudomonas mendocina ymp	5110233
YP_001189490.1	CDS	Pmen_4011	NC_009439.1	4387544	4388836	D	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase	4387544..4388836	Pseudomonas mendocina ymp	5110234
YP_001189491.1	CDS	pdxA	NC_009439.1	4388935	4389948	D	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase	4388935..4389948	Pseudomonas mendocina ymp	5110235
YP_001189492.1	CDS	ksgA	NC_009439.1	4390163	4390972	D	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase	4390163..4390972	Pseudomonas mendocina ymp	5110236
YP_001189493.1	CDS	apaG	NC_009439.1	4391002	4391382	D	protein associated with Co2+ and Mg2+ efflux; ApaG protein	4391002..4391382	Pseudomonas mendocina ymp	5110237
YP_001189494.1	CDS	apaH	NC_009439.1	4391382	4392200	D	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase	4391382..4392200	Pseudomonas mendocina ymp	5110238
YP_001189495.1	CDS	glpE	NC_009439.1	4392242	4392571	D	belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; thiosulfate sulfurtransferase	4392242..4392571	Pseudomonas mendocina ymp	5110239
YP_001189496.1	CDS	Pmen_4017	NC_009439.1	4392854	4394776	D	PFAM: PrkA serine kinase; PrkA AAA domain protein; putative serine protein kinase PrkA	4392854..4394776	Pseudomonas mendocina ymp	5106314
YP_001189497.1	CDS	Pmen_4018	NC_009439.1	4394851	4396122	D	PFAM: protein of unknown function DUF444; hypothetical protein	4394851..4396122	Pseudomonas mendocina ymp	5106315
YP_001189498.1	CDS	Pmen_4019	NC_009439.1	4396133	4397698	D	PFAM: SpoVR family protein; SpoVR family protein	4396133..4397698	Pseudomonas mendocina ymp	5106316
YP_001189499.1	CDS	Pmen_4020	NC_009439.1	4397712	4398272	D	hypothetical protein	4397712..4398272	Pseudomonas mendocina ymp	5106317
YP_001189500.1	CDS	cca	NC_009439.1	4398386	4399618	D	catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	4398386..4399618	Pseudomonas mendocina ymp	5106318
YP_001189501.1	CDS	Pmen_4022	NC_009439.1	4399734	4400267	R	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	complement(4399734..4400267)	Pseudomonas mendocina ymp	5106319
YP_001189502.1	CDS	Pmen_4023	NC_009439.1	4400258	4400614	R	TIGRFAM: dihydroneopterin aldolase; dihydroneopterin aldolase	complement(4400258..4400614)	Pseudomonas mendocina ymp	5106320
YP_001189503.1	CDS	Pmen_4024	NC_009439.1	4400681	4401259	D	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY	4400681..4401259	Pseudomonas mendocina ymp	5106321
YP_001189504.1	CDS	Pmen_4025	NC_009439.1	4401293	4402318	R	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease	complement(4401293..4402318)	Pseudomonas mendocina ymp	5106322
YP_001189505.1	CDS	rpsU	NC_009439.1	4402522	4402737	D	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21	4402522..4402737	Pseudomonas mendocina ymp	5106323
YP_001189506.1	CDS	dnaG	NC_009439.1	4402883	4404874	D	synthesizes RNA primers at the replication forks; DNA primase	4402883..4404874	Pseudomonas mendocina ymp	5106324
YP_001189507.1	CDS	Pmen_4028	NC_009439.1	4404942	4406789	D	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD	4404942..4406789	Pseudomonas mendocina ymp	5106325
YP_001189508.1	CDS	Pmen_4029	NC_009439.1	4406940	4410674	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; extracellular solute-binding protein, family 3; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase	4406940..4410674	Pseudomonas mendocina ymp	5106326
YP_001189509.1	CDS	Pmen_4030	NC_009439.1	4410999	4411331	D	hypothetical protein	4410999..4411331	Pseudomonas mendocina ymp	5107302
YP_001189510.1	CDS	Pmen_4031	NC_009439.1	4411533	4411799	D	PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator	4411533..4411799	Pseudomonas mendocina ymp	5106328
YP_001189511.1	CDS	Pmen_4032	NC_009439.1	4411796	4413130	D	PFAM: HipA domain protein; HipA domain-containing protein	4411796..4413130	Pseudomonas mendocina ymp	5106329
YP_001189512.1	CDS	Pmen_4033	NC_009439.1	4413429	4414199	D	PFAM: NERD domain protein; DNA topoisomerase, type IA, zn finger domain protein; NERD domain-containing protein	4413429..4414199	Pseudomonas mendocina ymp	5106330
YP_001189513.1	CDS	Pmen_4034	NC_009439.1	4414352	4415752	D	hypothetical protein	4414352..4415752	Pseudomonas mendocina ymp	5106331
YP_001189514.1	CDS	Pmen_4035	NC_009439.1	4415749	4416729	D	hypothetical protein	4415749..4416729	Pseudomonas mendocina ymp	5106332
YP_001189515.1	CDS	Pmen_4036	NC_009439.1	4416852	4417949	D	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase	4416852..4417949	Pseudomonas mendocina ymp	5106333
YP_001189516.1	CDS	Pmen_4037	NC_009439.1	4418316	4419599	D	PFAM: protein of unknown function DUF323; hypothetical protein	4418316..4419599	Pseudomonas mendocina ymp	5106334
YP_001189517.1	CDS	Pmen_4038	NC_009439.1	4419602	4420564	D	PFAM: Methyltransferase type 12; type 12 methyltransferase	4419602..4420564	Pseudomonas mendocina ymp	5106335
YP_001189518.1	CDS	Pmen_4039	NC_009439.1	4420804	4421028	R	PFAM: protein of unknown function UPF0057; hypothetical protein	complement(4420804..4421028)	Pseudomonas mendocina ymp	5106336
YP_001189519.1	CDS	Pmen_4040	NC_009439.1	4421145	4421795	D	PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator	4421145..4421795	Pseudomonas mendocina ymp	5106337
YP_001189520.1	CDS	Pmen_4041	NC_009439.1	4421797	4423428	R	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor hybrid histidine kinase	complement(4421797..4423428)	Pseudomonas mendocina ymp	5106338
YP_001189521.1	CDS	Pmen_4042	NC_009439.1	4423611	4423982	D	hypothetical protein	4423611..4423982	Pseudomonas mendocina ymp	5106339
YP_001189522.1	CDS	Pmen_4043	NC_009439.1	4424017	4425117	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	complement(4424017..4425117)	Pseudomonas mendocina ymp	5106340
YP_001189523.1	CDS	Pmen_4044	NC_009439.1	4425205	4426500	R	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM	complement(4425205..4426500)	Pseudomonas mendocina ymp	5106341
YP_001189524.1	CDS	Pmen_4045	NC_009439.1	4426490	4426966	R	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ	complement(4426490..4426966)	Pseudomonas mendocina ymp	5106342
YP_001189525.1	CDS	Pmen_4046	NC_009439.1	4427124	4428125	R	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	complement(4427124..4428125)	Pseudomonas mendocina ymp	5106343
YP_001189526.1	CDS	Pmen_4047	NC_009439.1	4428423	4429883	D	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator	4428423..4429883	Pseudomonas mendocina ymp	5106344
YP_001189527.1	CDS	Pmen_4048	NC_009439.1	4430311	4431696	D	PFAM: Gluconate transporter; Citrate transporter; citrate transporter	4430311..4431696	Pseudomonas mendocina ymp	5106345
YP_001189528.1	CDS	Pmen_4049	NC_009439.1	4431771	4433399	D	PFAM: coenzyme A transferase; propionate CoA-transferase	4431771..4433399	Pseudomonas mendocina ymp	5106346
YP_001189529.1	CDS	Pmen_4050	NC_009439.1	4433541	4435853	D	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase alpha (molybdopterin) subunit	4433541..4435853	Pseudomonas mendocina ymp	5106347
YP_001189530.1	CDS	Pmen_4051	NC_009439.1	4435850	4436812	R	catalyzes the formation of putrescine from agmatine; agmatinase	complement(4435850..4436812)	Pseudomonas mendocina ymp	5106348
YP_001189531.1	CDS	Pmen_4052	NC_009439.1	4436867	4437940	R	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	complement(4436867..4437940)	Pseudomonas mendocina ymp	5106349
YP_001189532.1	CDS	Pmen_4053	NC_009439.1	4438117	4438950	R	PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; AraC family transcriptional regulator	complement(4438117..4438950)	Pseudomonas mendocina ymp	5106350
YP_001189533.1	CDS	Pmen_4054	NC_009439.1	4439123	4440019	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	4439123..4440019	Pseudomonas mendocina ymp	5106351
YP_001189534.1	CDS	Pmen_4055	NC_009439.1	4440016	4440270	R	hypothetical protein	complement(4440016..4440270)	Pseudomonas mendocina ymp	5106352
YP_001189535.1	CDS	Pmen_4056	NC_009439.1	4440402	4440956	D	PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase	4440402..4440956	Pseudomonas mendocina ymp	5106353
YP_001189536.1	CDS	Pmen_4057	NC_009439.1	4441061	4441636	D	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	4441061..4441636	Pseudomonas mendocina ymp	5106354
YP_001189537.1	CDS	Pmen_4058	NC_009439.1	4441638	4442516	D	alpha/beta hydrolase-like protein	4441638..4442516	Pseudomonas mendocina ymp	5106355
YP_001189538.1	CDS	Pmen_4059	NC_009439.1	4442950	4444905	R	PFAM: protein of unknown function DUF839; hypothetical protein	complement(4442950..4444905)	Pseudomonas mendocina ymp	5106356
YP_001189539.1	CDS	Pmen_4060	NC_009439.1	4444973	4445764	R	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; TonB family protein	complement(4444973..4445764)	Pseudomonas mendocina ymp	5106357
YP_001189540.1	CDS	Pmen_4061	NC_009439.1	4445761	4446210	R	PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR	complement(4445761..4446210)	Pseudomonas mendocina ymp	5106358
YP_001189541.1	CDS	Pmen_4062	NC_009439.1	4446221	4446931	R	PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel	complement(4446221..4446931)	Pseudomonas mendocina ymp	5106359
YP_001189542.1	CDS	Pmen_4063	NC_009439.1	4447026	4448981	R	PFAM: phytase; 3-phytase	complement(4447026..4448981)	Pseudomonas mendocina ymp	5106360
YP_001189543.1	CDS	Pmen_4064	NC_009439.1	4449043	4451553	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor	complement(4449043..4451553)	Pseudomonas mendocina ymp	5106361
YP_001189544.1	CDS	Pmen_4065	NC_009439.1	4451906	4452823	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	4451906..4452823	Pseudomonas mendocina ymp	5106362
YP_001189545.1	CDS	Pmen_4066	NC_009439.1	4452834	4453865	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	4452834..4453865	Pseudomonas mendocina ymp	5106363
YP_001189546.1	CDS	Pmen_4067	NC_009439.1	4454269	4454928	D	PFAM: Endonuclease I; endonuclease I	4454269..4454928	Pseudomonas mendocina ymp	5106364
YP_001189547.1	CDS	Pmen_4068	NC_009439.1	4455057	4455809	R	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; GntR family transcriptional regulator	complement(4455057..4455809)	Pseudomonas mendocina ymp	5106365
YP_001189548.1	CDS	Pmen_4069	NC_009439.1	4456191	4457726	R	catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase	complement(4456191..4457726)	Pseudomonas mendocina ymp	5106366
YP_001189549.1	CDS	Pmen_4070	NC_009439.1	4457844	4459505	R	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase	complement(4457844..4459505)	Pseudomonas mendocina ymp	5106367
YP_001189550.1	CDS	Pmen_4071	NC_009439.1	4459545	4460870	R	PFAM: nucleoside recognition domain protein; nucleoside recognition domain-containing protein	complement(4459545..4460870)	Pseudomonas mendocina ymp	5106368
YP_001189551.1	CDS	Pmen_4072	NC_009439.1	4460962	4461897	R	catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase	complement(4460962..4461897)	Pseudomonas mendocina ymp	5106369
YP_001189552.1	CDS	Pmen_4073	NC_009439.1	4461887	4463104	R	TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3; imidazolonepropionase	complement(4461887..4463104)	Pseudomonas mendocina ymp	5106370
YP_001189553.1	CDS	Pmen_4074	NC_009439.1	4463332	4463925	D	PFAM: protein of unknown function DUF886; hypothetical protein	4463332..4463925	Pseudomonas mendocina ymp	5106371
YP_001189554.1	CDS	Pmen_4075	NC_009439.1	4464005	4465165	D	PFAM: Na+/Pi-cotransporter; Na+/Pi-cotransporter	4464005..4465165	Pseudomonas mendocina ymp	5106372
YP_001189555.1	CDS	Pmen_4076	NC_009439.1	4465185	4465412	D	hypothetical protein	4465185..4465412	Pseudomonas mendocina ymp	5106373
YP_001189556.1	CDS	Pmen_4077	NC_009439.1	4465417	4466358	D	TIGRFAM: phosphate binding protein; phosphate binding protein	4465417..4466358	Pseudomonas mendocina ymp	5106374
YP_001189557.1	CDS	Pmen_4078	NC_009439.1	4466403	4467335	R	PFAM: protein of unknown function DUF344; hypothetical protein	complement(4466403..4467335)	Pseudomonas mendocina ymp	5106375
YP_001189558.1	CDS	Pmen_4079	NC_009439.1	4467630	4469408	R	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein	complement(4467630..4469408)	Pseudomonas mendocina ymp	5106376
YP_001189559.1	CDS	Pmen_4080	NC_009439.1	4469574	4470893	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase	complement(4469574..4470893)	Pseudomonas mendocina ymp	5106377
YP_001189560.1	CDS	Pmen_4081	NC_009439.1	4471008	4472813	R	PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein	complement(4471008..4472813)	Pseudomonas mendocina ymp	5106378
YP_001189561.1	CDS	Pmen_4082	NC_009439.1	4472984	4473718	R	hypothetical protein	complement(4472984..4473718)	Pseudomonas mendocina ymp	5106379
YP_001189562.1	CDS	Pmen_4083	NC_009439.1	4473771	4474079	R	hypothetical protein	complement(4473771..4474079)	Pseudomonas mendocina ymp	5106380
YP_001189563.1	CDS	bioD	NC_009439.1	4474179	4474865	R	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase	complement(4474179..4474865)	Pseudomonas mendocina ymp	5106381
YP_001189564.1	CDS	Pmen_4085	NC_009439.1	4475277	4476080	R	TIGRFAM: biotin biosynthesis protein BioC; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; biotin biosynthesis protein BioC	complement(4475277..4476080)	Pseudomonas mendocina ymp	5106382
YP_001189565.1	CDS	Pmen_4086	NC_009439.1	4476243	4476968	R	PFAM: alpha/beta hydrolase fold; carboxylesterase	complement(4476243..4476968)	Pseudomonas mendocina ymp	5106383
YP_001189566.1	CDS	Pmen_4087	NC_009439.1	4476961	4478130	R	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase	complement(4476961..4478130)	Pseudomonas mendocina ymp	5106384
YP_001189567.1	CDS	Pmen_4088	NC_009439.1	4478179	4479237	R	TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase	complement(4478179..4479237)	Pseudomonas mendocina ymp	5106385
YP_001189568.1	CDS	Pmen_4089	NC_009439.1	4479432	4479725	D	hypothetical protein	4479432..4479725	Pseudomonas mendocina ymp	5106386
YP_001189569.1	CDS	Pmen_4090	NC_009439.1	4479768	4480508	D	amidophosphoribosyltransferase-like protein	4479768..4480508	Pseudomonas mendocina ymp	5106387
YP_001189570.1	CDS	Pmen_4091	NC_009439.1	4480569	4481333	D	TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein, LysR; TOBE domain protein; ModE family transcriptional regulator	4480569..4481333	Pseudomonas mendocina ymp	5106388
YP_001189571.1	CDS	Pmen_4092	NC_009439.1	4481411	4482385	D	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase	4481411..4482385	Pseudomonas mendocina ymp	5106389
YP_001189572.1	CDS	Pmen_4093	NC_009439.1	4482698	4483591	D	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; transporter DMT superfamily protein	4482698..4483591	Pseudomonas mendocina ymp	5106390
YP_001189573.1	CDS	Pmen_4094	NC_009439.1	4483884	4484402	R	PFAM: amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein	complement(4483884..4484402)	Pseudomonas mendocina ymp	5106391
YP_001189574.1	CDS	Pmen_4095	NC_009439.1	4484437	4484937	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(4484437..4484937)	Pseudomonas mendocina ymp	5106392
YP_001189575.1	CDS	Pmen_4096	NC_009439.1	4485243	4487420	D	catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G	4485243..4487420	Pseudomonas mendocina ymp	5105615
YP_001189576.1	CDS	Pmen_4097	NC_009439.1	4487560	4489491	D	PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; hypothetical protein	4487560..4489491	Pseudomonas mendocina ymp	5105616
YP_001189577.1	CDS	Pmen_4098	NC_009439.1	4489488	4490189	D	TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon	4489488..4490189	Pseudomonas mendocina ymp	5105617
YP_001189578.1	CDS	Pmen_4099	NC_009439.1	4490321	4491628	R	PFAM: peptidase U32; peptidase U32	complement(4490321..4491628)	Pseudomonas mendocina ymp	5105618
YP_001189579.1	CDS	Pmen_4100	NC_009439.1	4491841	4492347	R	hypothetical protein	complement(4491841..4492347)	Pseudomonas mendocina ymp	5105619
YP_001189580.1	CDS	Pmen_4101	NC_009439.1	4492439	4494208	R	PFAM: Na+/solute symporter; Na+/solute symporter	complement(4492439..4494208)	Pseudomonas mendocina ymp	5105620
YP_001189581.1	CDS	Pmen_4102	NC_009439.1	4494215	4494475	R	hypothetical protein	complement(4494215..4494475)	Pseudomonas mendocina ymp	5105621
YP_001189582.1	CDS	Pmen_4103	NC_009439.1	4494721	4496853	D	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor	4494721..4496853	Pseudomonas mendocina ymp	5105622
YP_001189583.1	CDS	Pmen_4104	NC_009439.1	4496928	4497716	R	hypothetical protein	complement(4496928..4497716)	Pseudomonas mendocina ymp	5105623
YP_001189584.1	CDS	Pmen_4105	NC_009439.1	4497929	4501036	D	TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; alpha-1,6-glucosidase	4497929..4501036	Pseudomonas mendocina ymp	5105624
YP_001189585.1	CDS	Pmen_4106	NC_009439.1	4501406	4501708	R	hypothetical protein	complement(4501406..4501708)	Pseudomonas mendocina ymp	5105625
YP_001189586.1	CDS	Pmen_4107	NC_009439.1	4501757	4503100	R	PFAM: Inner membrane CreD family protein; hypothetical protein	complement(4501757..4503100)	Pseudomonas mendocina ymp	5105626
YP_001189587.1	CDS	Pmen_4108	NC_009439.1	4503373	4504794	D	GbpA; plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium; in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin, glycoproteins and lipids on intestinal epithelial cells; N-acetylglucosamine-binding protein A	4503373..4504794	Pseudomonas mendocina ymp	5105627
YP_001189588.1	CDS	Pmen_4109	NC_009439.1	4505183	4506745	D	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase domain protein; peptidase S8/S53 subtilisin kexin sedolisin	4505183..4506745	Pseudomonas mendocina ymp	5105628
YP_001189589.1	CDS	Pmen_4110	NC_009439.1	4506900	4508543	D	hypothetical protein	4506900..4508543	Pseudomonas mendocina ymp	5105629
YP_001189590.1	CDS	Pmen_4111	NC_009439.1	4508540	4510840	D	SMART: helicase c2; helicase c2	4508540..4510840	Pseudomonas mendocina ymp	5105630
YP_001189591.1	CDS	Pmen_4112	NC_009439.1	4511128	4511523	D	hypothetical protein	4511128..4511523	Pseudomonas mendocina ymp	5105631
YP_001189592.1	CDS	Pmen_4113	NC_009439.1	4511659	4511859	D	hypothetical protein	4511659..4511859	Pseudomonas mendocina ymp	5105632
YP_001189593.1	CDS	Pmen_4114	NC_009439.1	4511901	4513463	R	PFAM: transposase IS66; transposase IS66	complement(4511901..4513463)	Pseudomonas mendocina ymp	5105633
YP_001189594.1	CDS	Pmen_4115	NC_009439.1	4513483	4513842	R	PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein	complement(4513483..4513842)	Pseudomonas mendocina ymp	5105634
YP_001189595.1	CDS	Pmen_4116	NC_009439.1	4513894	4514352	D	hypothetical protein	4513894..4514352	Pseudomonas mendocina ymp	5105635
YP_001189596.1	CDS	Pmen_4117	NC_009439.1	4514514	4514903	D	hypothetical protein	4514514..4514903	Pseudomonas mendocina ymp	5105636
YP_001189597.1	CDS	Pmen_4118	NC_009439.1	4514995	4515363	D	hypothetical protein	4514995..4515363	Pseudomonas mendocina ymp	5105637
YP_001189598.1	CDS	Pmen_4119	NC_009439.1	4515673	4517094	R	part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC	complement(4515673..4517094)	Pseudomonas mendocina ymp	5105638
YP_001189599.1	CDS	Pmen_4120	NC_009439.1	4517239	4517919	R	response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB	complement(4517239..4517919)	Pseudomonas mendocina ymp	5105639
YP_001189600.1	CDS	Pmen_4121	NC_009439.1	4518062	4518502	R	PFAM: CBS domain containing protein; signal-transduction protein	complement(4518062..4518502)	Pseudomonas mendocina ymp	5105640
YP_001189601.1	CDS	Pmen_4122	NC_009439.1	4518560	4520590	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(4518560..4520590)	Pseudomonas mendocina ymp	5105641
YP_001189602.1	CDS	Pmen_4123	NC_009439.1	4520752	4521264	R	PFAM: protein of unknown function DUF785; hypothetical protein	complement(4520752..4521264)	Pseudomonas mendocina ymp	5105642
YP_001189603.1	CDS	Pmen_4124	NC_009439.1	4521465	4522583	R	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase	complement(4521465..4522583)	Pseudomonas mendocina ymp	5105643
YP_001189604.1	CDS	Pmen_4125	NC_009439.1	4522761	4523651	D	PFAM: phospholipid/glycerol acyltransferase; putative acyltransferase	4522761..4523651	Pseudomonas mendocina ymp	5105644
YP_001189605.1	CDS	Pmen_4126	NC_009439.1	4523782	4524981	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase	complement(4523782..4524981)	Pseudomonas mendocina ymp	5105645
YP_001189606.1	CDS	Pmen_4127	NC_009439.1	4525253	4526116	R	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase	complement(4525253..4526116)	Pseudomonas mendocina ymp	5105646
YP_001189607.1	CDS	Pmen_4128	NC_009439.1	4526256	4526885	R	TIGRFAM: sarcosine oxidase, gamma subunit family; PFAM: Sarcosine oxidase, gamma subunit; sarcosine oxidase subunit gamma	complement(4526256..4526885)	Pseudomonas mendocina ymp	5105647
YP_001189608.1	CDS	Pmen_4129	NC_009439.1	4526878	4529895	R	TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; sarcosine oxidase subunit alpha	complement(4526878..4529895)	Pseudomonas mendocina ymp	5105648
YP_001189609.1	CDS	Pmen_4130	NC_009439.1	4529892	4530218	R	TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; sarcosine oxidase subunit delta	complement(4529892..4530218)	Pseudomonas mendocina ymp	5105649
YP_001189610.1	CDS	Pmen_4131	NC_009439.1	4530410	4531660	R	TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; sarcosine oxidase subunit beta	complement(4530410..4531660)	Pseudomonas mendocina ymp	5105650
YP_001189611.1	CDS	Pmen_4132	NC_009439.1	4531727	4532980	R	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase	complement(4531727..4532980)	Pseudomonas mendocina ymp	5105651
YP_001189612.1	CDS	Pmen_4133	NC_009439.1	4533651	4533950	R	hypothetical protein	complement(4533651..4533950)	Pseudomonas mendocina ymp	5105652
YP_001189613.1	CDS	Pmen_4134	NC_009439.1	4534186	4535226	D	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; L-threonine aldolase	4534186..4535226	Pseudomonas mendocina ymp	5105653
YP_001189614.1	CDS	Pmen_4135	NC_009439.1	4535256	4536479	R	TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; outer membrane autotransporter	complement(4535256..4536479)	Pseudomonas mendocina ymp	5105654
YP_001189615.1	CDS	Pmen_4136	NC_009439.1	4536602	4537705	R	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD-binding subunit	complement(4536602..4537705)	Pseudomonas mendocina ymp	5105655
YP_001189616.1	CDS	Pmen_4137	NC_009439.1	4538042	4539334	D	PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein	4538042..4539334	Pseudomonas mendocina ymp	5105656
YP_001189617.1	CDS	Pmen_4138	NC_009439.1	4539535	4541355	R	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; GTP-binding protein TypA	complement(4539535..4541355)	Pseudomonas mendocina ymp	5105657
YP_001189618.1	CDS	Pmen_4139	NC_009439.1	4541506	4542960	R	Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI	complement(4541506..4542960)	Pseudomonas mendocina ymp	5105658
YP_001189619.1	CDS	Pmen_4140	NC_009439.1	4543291	4544697	D	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; L-glutamine synthetase	4543291..4544697	Pseudomonas mendocina ymp	5105659
YP_001189620.1	CDS	Pmen_4141	NC_009439.1	4544963	4545529	D	hypothetical protein	4544963..4545529	Pseudomonas mendocina ymp	5105660
YP_001189621.1	CDS	Pmen_4142	NC_009439.1	4545532	4546152	D	hypothetical protein	4545532..4546152	Pseudomonas mendocina ymp	5105661
YP_001189622.1	CDS	Pmen_4143	NC_009439.1	4546416	4547504	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase	4546416..4547504	Pseudomonas mendocina ymp	5105662
YP_001189623.1	CDS	Pmen_4144	NC_009439.1	4547501	4548934	D	TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator, NtrC, Fis family	4547501..4548934	Pseudomonas mendocina ymp	5105663
YP_001189624.1	CDS	Pmen_4145	NC_009439.1	4549059	4549457	R	PFAM: TM2 domain containing protein+B7201; TM2 domain-containing protein	complement(4549059..4549457)	Pseudomonas mendocina ymp	5105664
YP_001189625.1	CDS	Pmen_4146	NC_009439.1	4549605	4550816	D	PFAM: Radical SAM domain protein; radical SAM domain-containing protein	4549605..4550816	Pseudomonas mendocina ymp	5105665
YP_001189626.1	CDS	Pmen_4147	NC_009439.1	4550816	4551703	D	hypothetical protein	4550816..4551703	Pseudomonas mendocina ymp	5105666
YP_001189627.1	CDS	Pmen_4148	NC_009439.1	4551669	4552814	R	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein	complement(4551669..4552814)	Pseudomonas mendocina ymp	5105667
YP_001189628.1	CDS	Pmen_4149	NC_009439.1	4552902	4553936	R	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein	complement(4552902..4553936)	Pseudomonas mendocina ymp	5105668
YP_001189629.1	CDS	Pmen_4150	NC_009439.1	4554012	4554704	D	PFAM: alanine racemase domain protein; alanine racemase domain-containing protein	4554012..4554704	Pseudomonas mendocina ymp	5105669
YP_001189630.1	CDS	Pmen_4151	NC_009439.1	4554722	4555543	D	catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase	4554722..4555543	Pseudomonas mendocina ymp	5105670
YP_001189631.1	CDS	Pmen_4152	NC_009439.1	4555553	4556146	D	PFAM: protein of unknown function YGGT; hypothetical protein	4555553..4556146	Pseudomonas mendocina ymp	5105671
YP_001189632.1	CDS	Pmen_4153	NC_009439.1	4556151	4556447	D	PFAM: protein of unknown function DUF167; hypothetical protein	4556151..4556447	Pseudomonas mendocina ymp	5105672
YP_001189633.1	CDS	Pmen_4154	NC_009439.1	4556684	4558666	D	GTPase (dynamin-related)-like protein	4556684..4558666	Pseudomonas mendocina ymp	5105673
YP_001189634.1	CDS	metX	NC_009439.1	4558798	4559937	D	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase	4558798..4559937	Pseudomonas mendocina ymp	5105674
YP_001189635.1	CDS	Pmen_4156	NC_009439.1	4559940	4560560	D	TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; methionine biosynthesis protein MetW	4559940..4560560	Pseudomonas mendocina ymp	5105675
YP_001189636.1	CDS	Pmen_4157	NC_009439.1	4560582	4560998	D	hypothetical protein	4560582..4560998	Pseudomonas mendocina ymp	5105676
YP_001189637.1	CDS	Pmen_4158	NC_009439.1	4560991	4561587	D	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase	4560991..4561587	Pseudomonas mendocina ymp	5105677
YP_001189638.1	CDS	Pmen_4159	NC_009439.1	4561584	4562744	D	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase	4561584..4562744	Pseudomonas mendocina ymp	5105678
YP_001189639.1	CDS	Pmen_4160	NC_009439.1	4563009	4565255	D	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; Sporulation domain protein; general secretion pathway protein D	4563009..4565255	Pseudomonas mendocina ymp	5105679
YP_001189640.1	CDS	Pmen_4161	NC_009439.1	4565499	4566167	D	hypothetical protein	4565499..4566167	Pseudomonas mendocina ymp	5105680
YP_001189641.1	CDS	Pmen_4162	NC_009439.1	4566205	4567995	D	PFAM: Carbohydrate-binding, CenC domain protein domain protein; carbohydrate-binding CenC domain-containing protein	4566205..4567995	Pseudomonas mendocina ymp	5105681
YP_001189642.1	CDS	Pmen_4163	NC_009439.1	4568048	4568581	D	hypothetical protein	4568048..4568581	Pseudomonas mendocina ymp	5105682
YP_001189643.1	CDS	Pmen_4164	NC_009439.1	4568835	4569158	D	hypothetical protein	4568835..4569158	Pseudomonas mendocina ymp	5105683
YP_001189644.1	CDS	Pmen_4165	NC_009439.1	4569319	4570662	R	PFAM: protein of unknown function DUF1329; hypothetical protein	complement(4569319..4570662)	Pseudomonas mendocina ymp	5105684
YP_001189645.1	CDS	trmB	NC_009439.1	4570844	4571560	R	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase	complement(4570844..4571560)	Pseudomonas mendocina ymp	5105685
YP_001189646.1	CDS	thiG	NC_009439.1	4571629	4572423	R	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase	complement(4571629..4572423)	Pseudomonas mendocina ymp	5105686
YP_001189647.1	CDS	Pmen_4168	NC_009439.1	4572443	4572643	R	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS	complement(4572443..4572643)	Pseudomonas mendocina ymp	5105687
YP_001189648.1	CDS	Pmen_4169	NC_009439.1	4572814	4573185	R	PFAM: protein of unknown function DUF423; hypothetical protein	complement(4572814..4573185)	Pseudomonas mendocina ymp	5105688
YP_001189649.1	CDS	mtgA	NC_009439.1	4573361	4574089	D	glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase	4573361..4574089	Pseudomonas mendocina ymp	5105689
YP_001189650.1	CDS	Pmen_4171	NC_009439.1	4574207	4574818	R	hypothetical protein	complement(4574207..4574818)	Pseudomonas mendocina ymp	5105690
YP_001189651.1	CDS	Pmen_4172	NC_009439.1	4574881	4575735	R	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32	complement(4574881..4575735)	Pseudomonas mendocina ymp	5105691
YP_001189652.1	CDS	Pmen_4173	NC_009439.1	4575848	4576864	R	PFAM: protein of unknown function DUF214; cell division protein FtsX	complement(4575848..4576864)	Pseudomonas mendocina ymp	5105692
YP_001189653.1	CDS	Pmen_4174	NC_009439.1	4576864	4577532	R	TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE	complement(4576864..4577532)	Pseudomonas mendocina ymp	5105693
YP_001189654.1	CDS	Pmen_4175	NC_009439.1	4577529	4578956	R	TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY	complement(4577529..4578956)	Pseudomonas mendocina ymp	5106599
YP_001189655.1	CDS	Pmen_4176	NC_009439.1	4579099	4580466	D	PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein	4579099..4580466	Pseudomonas mendocina ymp	5106600
YP_001189656.1	CDS	Pmen_4177	NC_009439.1	4580463	4581923	D	PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein	4580463..4581923	Pseudomonas mendocina ymp	5106601
YP_001189657.1	CDS	Pmen_4178	NC_009439.1	4581923	4582525	D	TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; putative methyltransferase	4581923..4582525	Pseudomonas mendocina ymp	5106602
YP_001189658.1	CDS	Pmen_4179	NC_009439.1	4582522	4582740	D	hypothetical protein	4582522..4582740	Pseudomonas mendocina ymp	5106603
YP_001189659.1	CDS	Pmen_4180	NC_009439.1	4582826	4583809	D	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	4582826..4583809	Pseudomonas mendocina ymp	5106604
YP_001189660.1	CDS	Pmen_4181	NC_009439.1	4583811	4584317	R	PFAM: Calcium/calmodulin dependent protein kinase II, association-domain protein; calcium/calmodulin dependent protein kinase II association-domain-containing protein	complement(4583811..4584317)	Pseudomonas mendocina ymp	5106605
YP_001189661.1	CDS	Pmen_4182	NC_009439.1	4584481	4585650	D	PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; GAF sensor signal transduction histidine kinase	4584481..4585650	Pseudomonas mendocina ymp	5106606
YP_001189662.1	CDS	Pmen_4183	NC_009439.1	4585647	4586309	D	PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator	4585647..4586309	Pseudomonas mendocina ymp	5106607
YP_001189663.1	CDS	Pmen_4184	NC_009439.1	4586306	4588657	D	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase	4586306..4588657	Pseudomonas mendocina ymp	5106608
YP_001189664.1	CDS	Pmen_4185	NC_009439.1	4588660	4589139	D	PFAM: response regulator receiver; response regulator receiver protein	4588660..4589139	Pseudomonas mendocina ymp	5106609
YP_001189665.1	CDS	Pmen_4186	NC_009439.1	4589145	4589882	R	PFAM: regulatory protein, TetR; TetR family transcriptional regulator	complement(4589145..4589882)	Pseudomonas mendocina ymp	5106610
YP_001189666.1	CDS	Pmen_4187	NC_009439.1	4590011	4591441	D	PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase	4590011..4591441	Pseudomonas mendocina ymp	5106611
YP_001189667.1	CDS	Pmen_4188	NC_009439.1	4591484	4592029	D	hypothetical protein	4591484..4592029	Pseudomonas mendocina ymp	5106612
YP_001189668.1	CDS	Pmen_4189	NC_009439.1	4592133	4593746	D	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; glucose-methanol-choline oxidoreductase	4592133..4593746	Pseudomonas mendocina ymp	5106613
YP_001189669.1	CDS	Pmen_4190	NC_009439.1	4593748	4594119	D	hypothetical protein	4593748..4594119	Pseudomonas mendocina ymp	5106614
YP_001189670.1	CDS	coaD	NC_009439.1	4594197	4594679	D	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase	4594197..4594679	Pseudomonas mendocina ymp	5106615
YP_001189671.1	CDS	Pmen_4192	NC_009439.1	4594837	4595088	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin	4594837..4595088	Pseudomonas mendocina ymp	5106616
YP_001189672.1	CDS	Pmen_4193	NC_009439.1	4595199	4596857	D	TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase	4595199..4596857	Pseudomonas mendocina ymp	5106617
YP_001189673.1	CDS	Pmen_4194	NC_009439.1	4596925	4598766	R	PFAM: Na+/Pi-cotransporter; Na+/Pi-cotransporter	complement(4596925..4598766)	Pseudomonas mendocina ymp	5106618
YP_001189674.1	CDS	Pmen_4195	NC_009439.1	4598855	4599193	R	hypothetical protein	complement(4598855..4599193)	Pseudomonas mendocina ymp	5106619
YP_001189675.1	CDS	Pmen_4196	NC_009439.1	4599270	4599848	R	PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase	complement(4599270..4599848)	Pseudomonas mendocina ymp	5106620
YP_001189676.1	CDS	Pmen_4197	NC_009439.1	4599927	4600739	R	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase	complement(4599927..4600739)	Pseudomonas mendocina ymp	5106621
YP_001189677.1	CDS	Pmen_4198	NC_009439.1	4600843	4601709	R	PFAM: HDOD; putative signal transduction protein	complement(4600843..4601709)	Pseudomonas mendocina ymp	5106622
YP_001189678.1	CDS	Pmen_4199	NC_009439.1	4601845	4603044	D	PFAM: putative RNA methylase; SAM-dependent methyltransferase	4601845..4603044	Pseudomonas mendocina ymp	5106623
YP_001189679.1	CDS	Pmen_4200	NC_009439.1	4603497	4604615	D	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase	4603497..4604615	Pseudomonas mendocina ymp	5106624
YP_001189680.1	CDS	Pmen_4201	NC_009439.1	4604638	4605711	D	spermidine/putrescine-binding periplasmic protein-like protein	4604638..4605711	Pseudomonas mendocina ymp	5106625
YP_001189681.1	CDS	Pmen_4202	NC_009439.1	4605795	4607030	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	4605795..4607030	Pseudomonas mendocina ymp	5106626
YP_001189682.1	CDS	Pmen_4203	NC_009439.1	4607038	4607892	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	4607038..4607892	Pseudomonas mendocina ymp	5106627
YP_001189683.1	CDS	Pmen_4204	NC_009439.1	4607927	4608769	R	hypothetical protein	complement(4607927..4608769)	Pseudomonas mendocina ymp	5106628
YP_001189684.1	CDS	Pmen_4205	NC_009439.1	4609211	4611049	D	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase	4609211..4611049	Pseudomonas mendocina ymp	5106629
YP_001189685.1	CDS	Pmen_4206	NC_009439.1	4611164	4611622	D	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; phosphodiesterase	4611164..4611622	Pseudomonas mendocina ymp	5106630
YP_001189686.1	CDS	Pmen_4207	NC_009439.1	4611860	4612387	D	TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase	4611860..4612387	Pseudomonas mendocina ymp	5106631
YP_001189687.1	CDS	Pmen_4208	NC_009439.1	4612446	4613093	R	PFAM: protein of unknown function DUF161; hypothetical protein	complement(4612446..4613093)	Pseudomonas mendocina ymp	5106632
YP_001189688.1	CDS	Pmen_4209	NC_009439.1	4613199	4613729	R	PFAM: dihydrofolate reductase region; dihydrofolate reductase	complement(4613199..4613729)	Pseudomonas mendocina ymp	5106633
YP_001189689.1	CDS	Pmen_4210	NC_009439.1	4613875	4615026	D	PFAM: glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase	4613875..4615026	Pseudomonas mendocina ymp	5106634
YP_001189690.1	CDS	Pmen_4211	NC_009439.1	4615087	4616478	D	hypothetical protein	4615087..4616478	Pseudomonas mendocina ymp	5106635
YP_001189691.1	CDS	Pmen_4212	NC_009439.1	4616584	4617951	D	PFAM: GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein	4616584..4617951	Pseudomonas mendocina ymp	5106636
YP_001189692.1	CDS	thyA	NC_009439.1	4618055	4618849	R	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase	complement(4618055..4618849)	Pseudomonas mendocina ymp	5106637
YP_001189693.1	CDS	Pmen_4214	NC_009439.1	4618849	4619649	R	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase	complement(4618849..4619649)	Pseudomonas mendocina ymp	5106638
YP_001189694.1	CDS	Pmen_4215	NC_009439.1	4619660	4620442	R	PFAM: protein of unknown function DUF81; hypothetical protein	complement(4619660..4620442)	Pseudomonas mendocina ymp	5106639
YP_001189695.1	CDS	Pmen_4216	NC_009439.1	4620643	4621389	D	PFAM: protein of unknown function DUF833; hypothetical protein	4620643..4621389	Pseudomonas mendocina ymp	5106640
YP_001189696.1	CDS	Pmen_4217	NC_009439.1	4621551	4623830	R	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; phosphoenolpyruvate-protein phosphotransferase PtsP	complement(4621551..4623830)	Pseudomonas mendocina ymp	5106641
YP_001189697.1	CDS	Pmen_4218	NC_009439.1	4623849	4624328	R	hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase	complement(4623849..4624328)	Pseudomonas mendocina ymp	5106642
YP_001189698.1	CDS	Pmen_4219	NC_009439.1	4624473	4625126	D	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase	4624473..4625126	Pseudomonas mendocina ymp	5106643
YP_001189699.1	CDS	Pmen_4220	NC_009439.1	4625332	4625772	R	hypothetical protein	complement(4625332..4625772)	Pseudomonas mendocina ymp	5106644
YP_001189700.1	CDS	Pmen_4221	NC_009439.1	4625865	4627379	R	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase	complement(4625865..4627379)	Pseudomonas mendocina ymp	5106645
YP_001189701.1	CDS	Pmen_4222	NC_009439.1	4627535	4628644	D	hypothetical protein	4627535..4628644	Pseudomonas mendocina ymp	5106646
YP_001189702.1	CDS	Pmen_4223	NC_009439.1	4628666	4629379	D	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A	4628666..4629379	Pseudomonas mendocina ymp	5106647
YP_001189703.1	CDS	Pmen_4224	NC_009439.1	4629506	4629841	R	hypothetical protein	complement(4629506..4629841)	Pseudomonas mendocina ymp	5106648
YP_001189704.1	CDS	Pmen_4225	NC_009439.1	4629853	4632057	R	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase	complement(4629853..4632057)	Pseudomonas mendocina ymp	5106649
YP_001189705.1	CDS	Pmen_4226	NC_009439.1	4632137	4632589	D	TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; MerR family transcriptional regulator	4632137..4632589	Pseudomonas mendocina ymp	5106650
YP_001189706.1	CDS	Pmen_4227	NC_009439.1	4632599	4633510	R	PFAM: SdiA-regulated domain protein; SdiA-regulated domain-containing protein	complement(4632599..4633510)	Pseudomonas mendocina ymp	5106651
YP_001189707.1	CDS	Pmen_4228	NC_009439.1	4633582	4633929	R	PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; conserved hypothetical protein 156; hypothetical protein	complement(4633582..4633929)	Pseudomonas mendocina ymp	5106652
YP_001189708.1	CDS	Pmen_4229	NC_009439.1	4634025	4634978	R	PFAM: SdiA-regulated domain protein; SdiA-regulated domain-containing protein	complement(4634025..4634978)	Pseudomonas mendocina ymp	5106653
YP_001189709.1	CDS	Pmen_4230	NC_009439.1	4635025	4635723	R	PFAM: fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase	complement(4635025..4635723)	Pseudomonas mendocina ymp	5106654
YP_001189710.1	CDS	Pmen_4231	NC_009439.1	4635803	4637194	R	PFAM: FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein	complement(4635803..4637194)	Pseudomonas mendocina ymp	5106655
YP_001189711.1	CDS	Pmen_4232	NC_009439.1	4637376	4638605	D	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase	4637376..4638605	Pseudomonas mendocina ymp	5106656
YP_001189712.1	CDS	Pmen_4233	NC_009439.1	4638720	4639211	R	PFAM: protein of unknown function DUF523; hypothetical protein	complement(4638720..4639211)	Pseudomonas mendocina ymp	5106657
YP_001189713.1	CDS	Pmen_4234	NC_009439.1	4639503	4640039	D	hypothetical protein	4639503..4640039	Pseudomonas mendocina ymp	5106658
YP_001189714.1	CDS	Pmen_4235	NC_009439.1	4640075	4640812	R	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; 2OG-Fe(II) oxygenase	complement(4640075..4640812)	Pseudomonas mendocina ymp	5106659
YP_001189715.1	CDS	Pmen_4236	NC_009439.1	4640823	4641590	D	hypothetical protein	4640823..4641590	Pseudomonas mendocina ymp	5106660
YP_001189716.1	CDS	Pmen_4237	NC_009439.1	4641640	4642581	R	lysophospholipase-like protein	complement(4641640..4642581)	Pseudomonas mendocina ymp	5106661
YP_001189717.1	CDS	Pmen_4238	NC_009439.1	4642697	4643278	D	hypothetical protein	4642697..4643278	Pseudomonas mendocina ymp	5106662
YP_001189718.1	CDS	Pmen_4239	NC_009439.1	4643364	4644392	R	SMART: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	complement(4643364..4644392)	Pseudomonas mendocina ymp	5106663
YP_001189719.1	CDS	Pmen_4240	NC_009439.1	4644506	4646884	D	PFAM: peptidase S45, penicillin amidase; peptidase S45, penicillin amidase	4644506..4646884	Pseudomonas mendocina ymp	5106664
YP_001189720.1	CDS	Pmen_4241	NC_009439.1	4647219	4647662	R	hypothetical protein	complement(4647219..4647662)	Pseudomonas mendocina ymp	5106665
YP_001189721.1	CDS	Pmen_4242	NC_009439.1	4647661	4648125	D	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase	4647661..4648125	Pseudomonas mendocina ymp	5106666
YP_001189722.1	CDS	Pmen_4243	NC_009439.1	4648225	4648710	R	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB	complement(4648225..4648710)	Pseudomonas mendocina ymp	5106667
YP_001189723.1	CDS	Pmen_4244	NC_009439.1	4648739	4648999	R	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 3	complement(4648739..4648999)	Pseudomonas mendocina ymp	5106668
YP_001189724.1	CDS	Pmen_4245	NC_009439.1	4649001	4649414	R	PFAM: Rhodanese domain protein; rhodanese domain-containing protein	complement(4649001..4649414)	Pseudomonas mendocina ymp	5106669
YP_001189725.1	CDS	Pmen_4246	NC_009439.1	4649562	4651094	D	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase	4649562..4651094	Pseudomonas mendocina ymp	5106670
YP_001189726.1	CDS	Pmen_4247	NC_009439.1	4651202	4652452	D	PFAM: peptidase M23B; peptidase M23B	4651202..4652452	Pseudomonas mendocina ymp	5106671
YP_001189727.1	CDS	Pmen_4248	NC_009439.1	4652499	4653815	D	TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease	4652499..4653815	Pseudomonas mendocina ymp	5106672
YP_001189728.1	CDS	Pmen_4249	NC_009439.1	4653973	4654728	R	SMART: extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(4653973..4654728)	Pseudomonas mendocina ymp	5106673
YP_001189729.1	CDS	Pmen_4250	NC_009439.1	4654865	4655620	R	amino acid ABC transporter periplasmic protein	complement(4654865..4655620)	Pseudomonas mendocina ymp	5106674
YP_001189730.1	CDS	Pmen_4251	NC_009439.1	4655705	4656439	R	amino acid ABC transporter periplasmic protein	complement(4655705..4656439)	Pseudomonas mendocina ymp	5106675
YP_001189731.1	CDS	Pmen_4252	NC_009439.1	4656652	4657422	R	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF	complement(4656652..4657422)	Pseudomonas mendocina ymp	5106676
YP_001189732.1	CDS	Pmen_4253	NC_009439.1	4657495	4658232	R	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	complement(4657495..4658232)	Pseudomonas mendocina ymp	5106677
YP_001189733.1	CDS	Pmen_4254	NC_009439.1	4658270	4658524	R	hypothetical protein	complement(4658270..4658524)	Pseudomonas mendocina ymp	5107028
YP_001189734.1	CDS	hisH	NC_009439.1	4658524	4659162	R	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH	complement(4658524..4659162)	Pseudomonas mendocina ymp	5107029
YP_001189735.1	CDS	hisB	NC_009439.1	4659163	4659756	R	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase	complement(4659163..4659756)	Pseudomonas mendocina ymp	5107030
YP_001189736.1	CDS	Pmen_4257	NC_009439.1	4659929	4661020	D	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	4659929..4661020	Pseudomonas mendocina ymp	5107031
YP_001189737.1	CDS	Pmen_4258	NC_009439.1	4661102	4663327	D	PFAM: AsmA family protein; AsmA family protein	4661102..4663327	Pseudomonas mendocina ymp	5107032
YP_001189738.1	CDS	Pmen_4259	NC_009439.1	4663324	4664391	D	TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; A/G-specific DNA-adenine glycosylase	4663324..4664391	Pseudomonas mendocina ymp	5107033
YP_001189739.1	CDS	Pmen_4260	NC_009439.1	4664388	4664660	D	PFAM: Fe(II) trafficking protein YggX; hypothetical protein	4664388..4664660	Pseudomonas mendocina ymp	5107034
YP_001189740.1	CDS	Pmen_4261	NC_009439.1	4664986	4666680	D	hypothetical protein	4664986..4666680	Pseudomonas mendocina ymp	5107303
YP_001189741.1	CDS	Pmen_4262	NC_009439.1	4667090	4667548	R	hypothetical protein	complement(4667090..4667548)	Pseudomonas mendocina ymp	5107036
YP_001189742.1	CDS	Pmen_4263	NC_009439.1	4667840	4668328	R	PFAM: ribonuclease H; ribonuclease H	complement(4667840..4668328)	Pseudomonas mendocina ymp	5107037
YP_001189743.1	CDS	Pmen_4264	NC_009439.1	4668472	4669200	R	hypothetical protein	complement(4668472..4669200)	Pseudomonas mendocina ymp	5107038
YP_001189744.1	CDS	Pmen_4265	NC_009439.1	4669210	4669491	R	hypothetical protein	complement(4669210..4669491)	Pseudomonas mendocina ymp	5107039
YP_001189745.1	CDS	Pmen_4266	NC_009439.1	4670146	4670841	R	PFAM: Resolvase, N-terminal domain; resolvase domain-containing protein	complement(4670146..4670841)	Pseudomonas mendocina ymp	5107040
YP_001189746.1	CDS	Pmen_4267	NC_009439.1	4671277	4672377	D	hypothetical protein	4671277..4672377	Pseudomonas mendocina ymp	5107041
YP_001189747.1	CDS	Pmen_4268	NC_009439.1	4672374	4672745	D	hypothetical protein	4672374..4672745	Pseudomonas mendocina ymp	5107042
YP_001189748.1	CDS	Pmen_4269	NC_009439.1	4673130	4673903	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	4673130..4673903	Pseudomonas mendocina ymp	5107043
YP_001189749.1	CDS	Pmen_4270	NC_009439.1	4673919	4674671	D	PFAM: extracellular solute-binding protein, family 3; extracellular solute-binding protein	4673919..4674671	Pseudomonas mendocina ymp	5107044
YP_001189750.1	CDS	Pmen_4271	NC_009439.1	4674726	4675421	D	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	4674726..4675421	Pseudomonas mendocina ymp	5107045
YP_001189751.1	CDS	Pmen_4272	NC_009439.1	4675418	4676188	D	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit	4675418..4676188	Pseudomonas mendocina ymp	5107046
YP_001189752.1	CDS	Pmen_4273	NC_009439.1	4676240	4677478	D	hypothetical protein	4676240..4677478	Pseudomonas mendocina ymp	5107047
YP_001189753.1	CDS	Pmen_4274	NC_009439.1	4677868	4678209	R	hypothetical protein	complement(4677868..4678209)	Pseudomonas mendocina ymp	5107304
YP_001189754.1	CDS	Pmen_4275	NC_009439.1	4678369	4679508	D	PFAM: acyltransferase 3; acyltransferase 3	4678369..4679508	Pseudomonas mendocina ymp	5107049
YP_001189755.1	CDS	Pmen_4276	NC_009439.1	4679521	4680501	D	hypothetical protein	4679521..4680501	Pseudomonas mendocina ymp	5107050
YP_001189756.1	CDS	Pmen_4277	NC_009439.1	4680504	4681910	R	PFAM: virulence factor MVIN family protein; virulence factor MVIN family protein	complement(4680504..4681910)	Pseudomonas mendocina ymp	5107051
YP_001189757.1	CDS	Pmen_4278	NC_009439.1	4681917	4682738	R	acetyltransferase	complement(4681917..4682738)	Pseudomonas mendocina ymp	5107052
YP_001189758.1	CDS	Pmen_4279	NC_009439.1	4682735	4684177	R	hypothetical protein	complement(4682735..4684177)	Pseudomonas mendocina ymp	5107053
YP_001189759.1	CDS	Pmen_4280	NC_009439.1	4684174	4685277	R	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	complement(4684174..4685277)	Pseudomonas mendocina ymp	5107054
YP_001189760.1	CDS	Pmen_4281	NC_009439.1	4685268	4686485	R	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	complement(4685268..4686485)	Pseudomonas mendocina ymp	5107055
YP_001189761.1	CDS	Pmen_4282	NC_009439.1	4686494	4687828	R	beta-xylosidase-like protein	complement(4686494..4687828)	Pseudomonas mendocina ymp	5107056
YP_001189762.1	CDS	Pmen_4283	NC_009439.1	4687818	4689008	R	PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase	complement(4687818..4689008)	Pseudomonas mendocina ymp	5107057
YP_001189763.1	CDS	Pmen_4284	NC_009439.1	4689008	4691002	R	PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein	complement(4689008..4691002)	Pseudomonas mendocina ymp	5107058
YP_001189764.1	CDS	Pmen_4285	NC_009439.1	4691023	4691790	R	PFAM: polysaccharide export protein; polysaccharide export protein	complement(4691023..4691790)	Pseudomonas mendocina ymp	5107059
YP_001189765.1	CDS	Pmen_4286	NC_009439.1	4691820	4692731	R	PFAM: glycosyl transferase, family 2; glycosyl transferase family protein	complement(4691820..4692731)	Pseudomonas mendocina ymp	5107060
YP_001189766.1	CDS	Pmen_4287	NC_009439.1	4692731	4694188	R	TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase	complement(4692731..4694188)	Pseudomonas mendocina ymp	5107061
YP_001189767.1	CDS	Pmen_4288	NC_009439.1	4694188	4695621	R	PFAM: sugar transferase; sugar transferase	complement(4694188..4695621)	Pseudomonas mendocina ymp	5107062
YP_001189768.1	CDS	Pmen_4289	NC_009439.1	4696039	4697100	D	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; dTDP-glucose 4,6-dehydratase	4696039..4697100	Pseudomonas mendocina ymp	5107063
YP_001189769.1	CDS	Pmen_4290	NC_009439.1	4697113	4697985	D	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase	4697113..4697985	Pseudomonas mendocina ymp	5107064
YP_001189770.1	CDS	Pmen_4291	NC_009439.1	4697982	4698530	D	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase	4697982..4698530	Pseudomonas mendocina ymp	5107065
YP_001189771.1	CDS	Pmen_4292	NC_009439.1	4698527	4699390	D	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase	4698527..4699390	Pseudomonas mendocina ymp	5107066
YP_001189772.1	CDS	Pmen_4293	NC_009439.1	4699443	4701257	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	4699443..4701257	Pseudomonas mendocina ymp	5107067
YP_001189773.1	CDS	Pmen_4294	NC_009439.1	4701254	4702639	D	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator	4701254..4702639	Pseudomonas mendocina ymp	5107068
YP_001189774.1	CDS	Pmen_4295	NC_009439.1	4702921	4703913	D	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	4702921..4703913	Pseudomonas mendocina ymp	5107069
YP_001189775.1	CDS	Pmen_4296	NC_009439.1	4704050	4704679	D	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ	4704050..4704679	Pseudomonas mendocina ymp	5107070
YP_001189776.1	CDS	Pmen_4297	NC_009439.1	4704676	4705956	D	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM	4704676..4705956	Pseudomonas mendocina ymp	5107071
YP_001189777.1	CDS	Pmen_4298	NC_009439.1	4706133	4706816	D	PFAM: protein of unknown function DUF502; hypothetical protein	4706133..4706816	Pseudomonas mendocina ymp	5107072
YP_001189778.1	CDS	Pmen_4299	NC_009439.1	4706813	4707280	R	PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator	complement(4706813..4707280)	Pseudomonas mendocina ymp	5107073
YP_001189779.1	CDS	Pmen_4300	NC_009439.1	4707408	4707734	D	hypothetical protein	4707408..4707734	Pseudomonas mendocina ymp	5107074
YP_001189780.1	CDS	Pmen_4301	NC_009439.1	4707832	4709616	D	PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; type II secretion system protein E	4707832..4709616	Pseudomonas mendocina ymp	5107075
YP_001189781.1	CDS	Pmen_4302	NC_009439.1	4709619	4710299	R	hypothetical protein	complement(4709619..4710299)	Pseudomonas mendocina ymp	5107076
YP_001189782.1	CDS	Pmen_4303	NC_009439.1	4710559	4711494	D	PFAM: band 7 protein; hypothetical protein	4710559..4711494	Pseudomonas mendocina ymp	5107077
YP_001189783.1	CDS	Pmen_4304	NC_009439.1	4711498	4711947	D	PFAM: protein of unknown function DUF107; hypothetical protein	4711498..4711947	Pseudomonas mendocina ymp	5107078
YP_001189784.1	CDS	Pmen_4305	NC_009439.1	4712069	4712410	D	TIGRFAM: conserved hypothetical protein; hypothetical protein	4712069..4712410	Pseudomonas mendocina ymp	5107079
YP_001189785.1	CDS	Pmen_4306	NC_009439.1	4712670	4713983	R	PFAM: outer membrane porin; outer membrane porin	complement(4712670..4713983)	Pseudomonas mendocina ymp	5107080
YP_001189786.1	CDS	Pmen_4307	NC_009439.1	4714414	4715397	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase	complement(4714414..4715397)	Pseudomonas mendocina ymp	5107081
YP_001189787.1	CDS	Pmen_4308	NC_009439.1	4715497	4716687	R	PFAM: fatty acid desaturase; fatty acid desaturase	complement(4715497..4716687)	Pseudomonas mendocina ymp	5107082
YP_001189788.1	CDS	Pmen_4309	NC_009439.1	4716856	4719156	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase	4716856..4719156	Pseudomonas mendocina ymp	5107083
YP_001189789.1	CDS	Pmen_4310	NC_009439.1	4719159	4720280	D	PFAM: response regulator receiver; HDOD; response regulator receiver protein	4719159..4720280	Pseudomonas mendocina ymp	5107084
YP_001189790.1	CDS	Pmen_4311	NC_009439.1	4720291	4724166	D	TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase	4720291..4724166	Pseudomonas mendocina ymp	5107085
YP_001189791.1	CDS	Pmen_4312	NC_009439.1	4724166	4726088	D	TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase	4724166..4726088	Pseudomonas mendocina ymp	5107086
YP_001189792.1	CDS	Pmen_4313	NC_009439.1	4726085	4728982	D	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase	4726085..4728982	Pseudomonas mendocina ymp	5107087
YP_001189793.1	CDS	Pmen_4314	NC_009439.1	4728975	4729361	D	PFAM: response regulator receiver; response regulator receiver protein	4728975..4729361	Pseudomonas mendocina ymp	5107088
YP_001189794.1	CDS	Pmen_4315	NC_009439.1	4729354	4731018	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Hpt domain protein; response regulator receiver modulated diguanylate cyclase	4729354..4731018	Pseudomonas mendocina ymp	5107089
YP_001189795.1	CDS	Pmen_4316	NC_009439.1	4731079	4731906	R	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease	complement(4731079..4731906)	Pseudomonas mendocina ymp	5107090
YP_001189796.1	CDS	Pmen_4317	NC_009439.1	4731903	4732742	R	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease	complement(4731903..4732742)	Pseudomonas mendocina ymp	5107091
YP_001189797.1	CDS	Pmen_4318	NC_009439.1	4732998	4734014	R	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; sulfate ABC transporter substrate-binding protein	complement(4732998..4734014)	Pseudomonas mendocina ymp	5107092
YP_001189798.1	CDS	Pmen_4319	NC_009439.1	4734237	4734509	R	PFAM: TOBE domain protein; TOBE domain-containing protein	complement(4734237..4734509)	Pseudomonas mendocina ymp	5107093
YP_001189799.1	CDS	ssuB	NC_009439.1	4734542	4735342	R	part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transport ATP-binding subunit	complement(4734542..4735342)	Pseudomonas mendocina ymp	5107094
YP_001189800.1	CDS	Pmen_4321	NC_009439.1	4735339	4736133	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(4735339..4736133)	Pseudomonas mendocina ymp	5107095
YP_001189801.1	CDS	Pmen_4322	NC_009439.1	4736372	4737520	R	catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase	complement(4736372..4737520)	Pseudomonas mendocina ymp	5107096
YP_001189802.1	CDS	Pmen_4323	NC_009439.1	4737613	4738593	R	TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; aliphatic sulfonates ABC transporter substrate-binding protein	complement(4737613..4738593)	Pseudomonas mendocina ymp	5107097
YP_001189803.1	CDS	Pmen_4324	NC_009439.1	4738670	4739263	R	PFAM: NADPH-dependent FMN reductase; NAD(P)H-dependent FMN reductase	complement(4738670..4739263)	Pseudomonas mendocina ymp	5107098
YP_001189804.1	CDS	Pmen_4325	NC_009439.1	4739273	4739911	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; 1-Cys peroxiredoxin	complement(4739273..4739911)	Pseudomonas mendocina ymp	5107099
YP_001189805.1	CDS	Pmen_4326	NC_009439.1	4740038	4740493	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	4740038..4740493	Pseudomonas mendocina ymp	5107100
YP_001189806.1	CDS	Pmen_4327	NC_009439.1	4740488	4741822	R	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; chromate transporter	complement(4740488..4741822)	Pseudomonas mendocina ymp	5107101
YP_001189807.1	CDS	Pmen_4328	NC_009439.1	4742656	4744449	D	hypothetical protein	4742656..4744449	Pseudomonas mendocina ymp	5107102
YP_001189808.1	CDS	Pmen_4329	NC_009439.1	4745079	4745810	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(4745079..4745810)	Pseudomonas mendocina ymp	5107103
YP_001189809.1	CDS	Pmen_4330	NC_009439.1	4745807	4746637	R	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(4745807..4746637)	Pseudomonas mendocina ymp	5107104
YP_001189810.1	CDS	Pmen_4331	NC_009439.1	4746641	4747633	R	TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: extracellular solute-binding protein, family 3; aliphatic sulfonates ABC transporter substrate-binding protein	complement(4746641..4747633)	Pseudomonas mendocina ymp	5107105
YP_001189811.1	CDS	Pmen_4332	NC_009439.1	4747711	4749030	R	PFAM: outer membrane porin; outer membrane porin	complement(4747711..4749030)	Pseudomonas mendocina ymp	5107106
YP_001189812.1	CDS	Pmen_4333	NC_009439.1	4749385	4750377	D	TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; aliphatic sulfonates ABC transporter substrate-binding protein	4749385..4750377	Pseudomonas mendocina ymp	5107186
YP_001189813.1	CDS	Pmen_4334	NC_009439.1	4750374	4751603	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase type 2	4750374..4751603	Pseudomonas mendocina ymp	5107187
YP_001189814.1	CDS	Pmen_4335	NC_009439.1	4751707	4752633	D	PFAM: Rhodanese domain protein; rhodanese domain-containing protein	4751707..4752633	Pseudomonas mendocina ymp	5107188
YP_001189815.1	CDS	Pmen_4336	NC_009439.1	4752837	4754021	D	PFAM: protein of unknown function DUF395, YeeE/YedE; hypothetical protein	4752837..4754021	Pseudomonas mendocina ymp	5107189
YP_001189816.1	CDS	Pmen_4337	NC_009439.1	4754199	4755443	R	PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(4754199..4755443)	Pseudomonas mendocina ymp	5107190
YP_001189817.1	CDS	Pmen_4338	NC_009439.1	4755724	4756350	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase	4755724..4756350	Pseudomonas mendocina ymp	5107191
YP_001189818.1	CDS	Pmen_4339	NC_009439.1	4756548	4757324	D	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; molybdenum ABC transporter periplasmic molybdate-binding protein	4756548..4757324	Pseudomonas mendocina ymp	5107192
YP_001189819.1	CDS	Pmen_4340	NC_009439.1	4757390	4758070	D	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit	4757390..4758070	Pseudomonas mendocina ymp	5107193
YP_001189820.1	CDS	Pmen_4341	NC_009439.1	4758070	4759194	D	TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase	4758070..4759194	Pseudomonas mendocina ymp	5107194
YP_001189821.1	CDS	Pmen_4342	NC_009439.1	4759654	4760484	R	PFAM: sigma-54 factor, interaction domain-containing protein; SMART: AAA ATPase; sigma-54 factor interaction domain-containing protein	complement(4759654..4760484)	Pseudomonas mendocina ymp	5107195
YP_001189822.1	CDS	Pmen_4343	NC_009439.1	4760598	4761179	R	PFAM: protein of unknown function DUF1234; hypothetical protein	complement(4760598..4761179)	Pseudomonas mendocina ymp	5107196
YP_001189823.1	CDS	Pmen_4344	NC_009439.1	4761423	4761605	D	hypothetical protein	4761423..4761605	Pseudomonas mendocina ymp	5107197
YP_001189824.1	CDS	Pmen_4345	NC_009439.1	4761697	4762695	D	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; sulfate ABC transporter substrate-binding protein	4761697..4762695	Pseudomonas mendocina ymp	5107198
YP_001189825.1	CDS	Pmen_4346	NC_009439.1	4762781	4763599	D	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease	4762781..4763599	Pseudomonas mendocina ymp	5107199
YP_001189826.1	CDS	Pmen_4347	NC_009439.1	4763610	4764482	D	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease	4763610..4764482	Pseudomonas mendocina ymp	5107200
YP_001189827.1	CDS	Pmen_4348	NC_009439.1	4764486	4765484	D	TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase	4764486..4765484	Pseudomonas mendocina ymp	5107201
YP_001189828.1	CDS	Pmen_4349	NC_009439.1	4765625	4766026	R	hypothetical protein	complement(4765625..4766026)	Pseudomonas mendocina ymp	5107202
YP_001189829.1	CDS	Pmen_4350	NC_009439.1	4766150	4766944	D	PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator	4766150..4766944	Pseudomonas mendocina ymp	5107203
YP_001189830.1	CDS	Pmen_4351	NC_009439.1	4767116	4767862	D	hypothetical protein	4767116..4767862	Pseudomonas mendocina ymp	5107204
YP_001189831.1	CDS	Pmen_4352	NC_009439.1	4768086	4768610	R	PFAM: protein of unknown function DUF962; hypothetical protein	complement(4768086..4768610)	Pseudomonas mendocina ymp	5107205
YP_001189832.1	CDS	Pmen_4353	NC_009439.1	4768735	4769418	D	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; CRP/FNR family transcriptional regulator	4768735..4769418	Pseudomonas mendocina ymp	5107206
YP_001189833.1	CDS	Pmen_4354	NC_009439.1	4769475	4771421	D	hypothetical protein	4769475..4771421	Pseudomonas mendocina ymp	5107207
YP_001189834.1	CDS	Pmen_4355	NC_009439.1	4771464	4772234	R	catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase	complement(4771464..4772234)	Pseudomonas mendocina ymp	5107208
YP_001189835.1	CDS	Pmen_4356	NC_009439.1	4772363	4773628	R	PFAM: outer membrane porin; outer membrane porin	complement(4772363..4773628)	Pseudomonas mendocina ymp	5107209
YP_001189836.1	CDS	Pmen_4357	NC_009439.1	4773872	4775584	R	PFAM: Tannase and feruloyl esterase; tannase and feruloyl esterase	complement(4773872..4775584)	Pseudomonas mendocina ymp	5107210
YP_001189837.1	CDS	Pmen_4358	NC_009439.1	4775834	4777312	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator	complement(4775834..4777312)	Pseudomonas mendocina ymp	5107211
YP_001189838.1	CDS	Pmen_4359	NC_009439.1	4777397	4778770	R	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM	complement(4777397..4778770)	Pseudomonas mendocina ymp	5107212
YP_001189839.1	CDS	Pmen_4360	NC_009439.1	4778784	4779371	R	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ	complement(4778784..4779371)	Pseudomonas mendocina ymp	5107213
YP_001189840.1	CDS	Pmen_4361	NC_009439.1	4779444	4780529	R	PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	complement(4779444..4780529)	Pseudomonas mendocina ymp	5107214
YP_001189841.1	CDS	Pmen_4362	NC_009439.1	4780878	4782608	R	TIGRFAM: esterase, PHB depolymerase family; PHB depolymerase family esterase	complement(4780878..4782608)	Pseudomonas mendocina ymp	5107215
YP_001189842.1	CDS	Pmen_4363	NC_009439.1	4782947	4784158	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(4782947..4784158)	Pseudomonas mendocina ymp	5107216
YP_001189843.1	CDS	Pmen_4364	NC_009439.1	4784161	4785219	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	4784161..4785219	Pseudomonas mendocina ymp	5107217
YP_001189844.1	CDS	Pmen_4365	NC_009439.1	4785230	4786543	R	PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase	complement(4785230..4786543)	Pseudomonas mendocina ymp	5107218
YP_001189845.1	CDS	Pmen_4366	NC_009439.1	4786626	4788041	R	PFAM: glutamine synthetase, catalytic region; glutamine synthetase	complement(4786626..4788041)	Pseudomonas mendocina ymp	5107219
YP_001189846.1	CDS	Pmen_4367	NC_009439.1	4788439	4790013	R	PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(4788439..4790013)	Pseudomonas mendocina ymp	5107220
YP_001189847.1	CDS	Pmen_4368	NC_009439.1	4790241	4791317	R	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase	complement(4790241..4791317)	Pseudomonas mendocina ymp	5107221
YP_001189848.1	CDS	Pmen_4369	NC_009439.1	4791314	4792327	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	complement(4791314..4792327)	Pseudomonas mendocina ymp	5107222
YP_001189849.1	CDS	Pmen_4370	NC_009439.1	4792431	4793489	D	PFAM: fatty acid desaturase; fatty acid desaturase	4792431..4793489	Pseudomonas mendocina ymp	5107223
YP_001189850.1	CDS	Pmen_4371	NC_009439.1	4793673	4796555	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor, extracellular region 2; PAS fold-4 domain protein; SMART: PAS domain containing protein; diguanylate cyclase/phosphodiesterase	4793673..4796555	Pseudomonas mendocina ymp	5107224
YP_001189851.1	CDS	Pmen_4372	NC_009439.1	4796540	4797754	R	PFAM: response regulator receiver; HDOD; putative signal transduction protein	complement(4796540..4797754)	Pseudomonas mendocina ymp	5107225
YP_001189852.1	CDS	rpmG	NC_009439.1	4798033	4798188	R	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33	complement(4798033..4798188)	Pseudomonas mendocina ymp	5107226
YP_001189853.1	CDS	rpmB	NC_009439.1	4798199	4798435	R	required for 70S ribosome assembly; 50S ribosomal protein L28	complement(4798199..4798435)	Pseudomonas mendocina ymp	5107227
YP_001189854.1	CDS	Pmen_4375	NC_009439.1	4798780	4800357	D	PFAM: extracellular solute-binding protein, family 5; 4-phytase	4798780..4800357	Pseudomonas mendocina ymp	5107228
YP_001189855.1	CDS	radC	NC_009439.1	4800411	4801085	R	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC	complement(4800411..4801085)	Pseudomonas mendocina ymp	5107229
YP_001189856.1	CDS	Pmen_4377	NC_009439.1	4801226	4802434	D	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase	4801226..4802434	Pseudomonas mendocina ymp	5107230
YP_001189857.1	CDS	dut	NC_009439.1	4802437	4802892	D	catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase	4802437..4802892	Pseudomonas mendocina ymp	5107231
YP_001189858.1	CDS	Pmen_4379	NC_009439.1	4802930	4805521	D	PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphomannomutase	4802930..4805521	Pseudomonas mendocina ymp	5107232
YP_001189859.1	CDS	Pmen_4380	NC_009439.1	4805546	4806451	D	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase	4805546..4806451	Pseudomonas mendocina ymp	5107233
YP_001189860.1	CDS	Pmen_4381	NC_009439.1	4806662	4807108	D	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	4806662..4807108	Pseudomonas mendocina ymp	5107234
YP_001189861.1	CDS	Pmen_4382	NC_009439.1	4807122	4807724	R	hypothetical protein	complement(4807122..4807724)	Pseudomonas mendocina ymp	5107235
YP_001189862.1	CDS	pyrE	NC_009439.1	4807740	4808381	R	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase	complement(4807740..4808381)	Pseudomonas mendocina ymp	5107236
YP_001189863.1	CDS	Pmen_4384	NC_009439.1	4808463	4809242	D	TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth	4808463..4809242	Pseudomonas mendocina ymp	5107237
YP_001189864.1	CDS	Pmen_4385	NC_009439.1	4809372	4809743	R	hypothetical protein	complement(4809372..4809743)	Pseudomonas mendocina ymp	5107238
YP_001189865.1	CDS	rph	NC_009439.1	4809772	4810491	R	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH	complement(4809772..4810491)	Pseudomonas mendocina ymp	5107239
YP_001189866.1	CDS	Pmen_4387	NC_009439.1	4810666	4811529	D	PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; hypothetical protein	4810666..4811529	Pseudomonas mendocina ymp	5107240
YP_001189867.1	CDS	gmk	NC_009439.1	4811584	4812201	D	Essential for recycling GMP and indirectly, cGMP; guanylate kinase	4811584..4812201	Pseudomonas mendocina ymp	5107241
YP_001189868.1	CDS	rpoZ	NC_009439.1	4812296	4812559	D	Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega	4812296..4812559	Pseudomonas mendocina ymp	5107242
YP_001189869.1	CDS	Pmen_4390	NC_009439.1	4812623	4814731	D	TIGRFAM: RelA/SpoT family protein; PFAM: TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA	4812623..4814731	Pseudomonas mendocina ymp	5107243
YP_001189870.1	CDS	Pmen_4391	NC_009439.1	4814800	4815180	D	TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP	4814800..4815180	Pseudomonas mendocina ymp	5107244
YP_001189871.1	CDS	Pmen_4392	NC_009439.1	4815239	4815964	D	hypothetical protein	4815239..4815964	Pseudomonas mendocina ymp	5107245
YP_001189872.1	CDS	Pmen_4393	NC_009439.1	4816003	4816620	R	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	complement(4816003..4816620)	Pseudomonas mendocina ymp	5107246
YP_001189873.1	CDS	Pmen_4394	NC_009439.1	4816768	4817568	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; AraC family transcriptional regulator	complement(4816768..4817568)	Pseudomonas mendocina ymp	5107247
YP_001189874.1	CDS	Pmen_4395	NC_009439.1	4817570	4818427	R	PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase	complement(4817570..4818427)	Pseudomonas mendocina ymp	5107248
YP_001189875.1	CDS	Pmen_4396	NC_009439.1	4818619	4819548	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	4818619..4819548	Pseudomonas mendocina ymp	5107249
YP_001189876.1	CDS	Pmen_4397	NC_009439.1	4819557	4821632	D	catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG	4819557..4821632	Pseudomonas mendocina ymp	5107250
YP_001189877.1	CDS	Pmen_4398	NC_009439.1	4821724	4823130	D	PFAM: HDOD; putative signal transduction protein	4821724..4823130	Pseudomonas mendocina ymp	5107251
YP_001189878.1	CDS	Pmen_4399	NC_009439.1	4823199	4823954	R	hypothetical protein	complement(4823199..4823954)	Pseudomonas mendocina ymp	5107252
YP_001189879.1	CDS	Pmen_4400	NC_009439.1	4824022	4824417	R	hypothetical protein	complement(4824022..4824417)	Pseudomonas mendocina ymp	5107253
YP_001189880.1	CDS	Pmen_4401	NC_009439.1	4824591	4824863	R	PFAM: histone family protein DNA-binding protein; nucleoid protein HU alpha subunit	complement(4824591..4824863)	Pseudomonas mendocina ymp	5107254
YP_001189881.1	CDS	Pmen_4402	NC_009439.1	4825051	4826199	R	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase	complement(4825051..4826199)	Pseudomonas mendocina ymp	5107255
YP_001189882.1	CDS	Pmen_4403	NC_009439.1	4826271	4826438	R	PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein	complement(4826271..4826438)	Pseudomonas mendocina ymp	5107256
YP_001189883.1	CDS	Pmen_4404	NC_009439.1	4826664	4827833	D	choline-glycine betaine transporter-like protein	4826664..4827833	Pseudomonas mendocina ymp	5107257
YP_001189884.1	CDS	Pmen_4405	NC_009439.1	4827891	4828646	R	hypothetical protein	complement(4827891..4828646)	Pseudomonas mendocina ymp	5107258
YP_001189885.1	CDS	Pmen_4406	NC_009439.1	4828858	4830198	R	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein	complement(4828858..4830198)	Pseudomonas mendocina ymp	5107259
YP_001189886.1	CDS	Pmen_4407	NC_009439.1	4830261	4831580	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase	complement(4830261..4831580)	Pseudomonas mendocina ymp	5107260
YP_001189887.1	CDS	Pmen_4408	NC_009439.1	4831617	4832306	R	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator	complement(4831617..4832306)	Pseudomonas mendocina ymp	5107261
YP_001189888.1	CDS	ubiA	NC_009439.1	4832390	4833280	R	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase	complement(4832390..4833280)	Pseudomonas mendocina ymp	5107262
YP_001189889.1	CDS	Pmen_4410	NC_009439.1	4833385	4833936	R	PFAM: Chorismate lyase; chorismate lyase	complement(4833385..4833936)	Pseudomonas mendocina ymp	5107263
YP_001189890.1	CDS	Pmen_4411	NC_009439.1	4834021	4834467	R	hypothetical protein	complement(4834021..4834467)	Pseudomonas mendocina ymp	5107264
YP_001189891.1	CDS	Pmen_4412	NC_009439.1	4834464	4834742	R	PFAM: Anti-sigma-28 factor, FlgM family protein; anti-sigma-28 factor FlgM family protein	complement(4834464..4834742)	Pseudomonas mendocina ymp	5107107
YP_001189892.1	CDS	Pmen_4413	NC_009439.1	4834819	4835244	R	TIGRFAM: flagellar export protein FliJ; flagellar export protein FliJ	complement(4834819..4835244)	Pseudomonas mendocina ymp	5107108
YP_001189893.1	CDS	Pmen_4414	NC_009439.1	4835241	4836557	R	TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase; FliI/YscN family ATPase	complement(4835241..4836557)	Pseudomonas mendocina ymp	5107109
YP_001189894.1	CDS	fliH	NC_009439.1	4836564	4837256	R	binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H	complement(4836564..4837256)	Pseudomonas mendocina ymp	5107110
YP_001189895.1	CDS	Pmen_4416	NC_009439.1	4837258	4838322	R	PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG	complement(4837258..4838322)	Pseudomonas mendocina ymp	5107111
YP_001189896.1	CDS	fliF	NC_009439.1	4838297	4839976	R	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar MS-ring protein	complement(4838297..4839976)	Pseudomonas mendocina ymp	5107112
YP_001189897.1	CDS	Pmen_4418	NC_009439.1	4839997	4840332	R	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE	complement(4839997..4840332)	Pseudomonas mendocina ymp	5107113
YP_001189898.1	CDS	Pmen_4419	NC_009439.1	4840344	4841753	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator	complement(4840344..4841753)	Pseudomonas mendocina ymp	5107114
YP_001189899.1	CDS	Pmen_4420	NC_009439.1	4842103	4843068	D	PFAM: surface presentation of antigens (SPOA) protein; surface presentation of antigens (SPOA) protein	4842103..4843068	Pseudomonas mendocina ymp	5107115
YP_001189900.1	CDS	Pmen_4421	NC_009439.1	4843065	4843436	D	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN	4843065..4843436	Pseudomonas mendocina ymp	5107116
YP_001189901.1	CDS	fliP	NC_009439.1	4843436	4844188	D	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP	4843436..4844188	Pseudomonas mendocina ymp	5107117
YP_001189902.1	CDS	Pmen_4423	NC_009439.1	4844201	4844473	D	PFAM: export protein FliQ, family 3; export protein FliQ	4844201..4844473	Pseudomonas mendocina ymp	5107118
YP_001189903.1	CDS	Pmen_4424	NC_009439.1	4844477	4845271	D	TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR	4844477..4845271	Pseudomonas mendocina ymp	5107119
YP_001189904.1	CDS	flhB	NC_009439.1	4845264	4846397	D	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB	4845264..4846397	Pseudomonas mendocina ymp	5107120
YP_001189905.1	CDS	Pmen_4426	NC_009439.1	4846401	4848497	D	TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; flagellar biosynthesis protein FlhA	4846401..4848497	Pseudomonas mendocina ymp	5107121
YP_001189906.1	CDS	Pmen_4427	NC_009439.1	4848612	4848953	R	hypothetical protein	complement(4848612..4848953)	Pseudomonas mendocina ymp	5107122
YP_001189907.1	CDS	Pmen_4428	NC_009439.1	4855052	4856275	R	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F	complement(4855052..4856275)	Pseudomonas mendocina ymp	5106727
YP_001189908.1	CDS	Pmen_4429	NC_009439.1	4856332	4857510	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein	complement(4856332..4857510)	Pseudomonas mendocina ymp	5107124
YP_001189909.1	CDS	Pmen_4430	NC_009439.1	4857688	4858584	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	4857688..4858584	Pseudomonas mendocina ymp	5107125
YP_001189910.1	CDS	Pmen_4431	NC_009439.1	4859051	4860172	D	PFAM: alanine dehydrogenase/PNT domain protein; NAD(P)(+) transhydrogenase	4859051..4860172	Pseudomonas mendocina ymp	5107126
YP_001189911.1	CDS	Pmen_4432	NC_009439.1	4860184	4860498	D	NAD/NADP transhydrogenase alpha subunit-like protein	4860184..4860498	Pseudomonas mendocina ymp	5107127
YP_001189912.1	CDS	Pmen_4433	NC_009439.1	4860501	4861937	D	PFAM: NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase	4860501..4861937	Pseudomonas mendocina ymp	5107128
YP_001189913.1	CDS	Pmen_4434	NC_009439.1	4862295	4862510	D	hypothetical protein	4862295..4862510	Pseudomonas mendocina ymp	5107129
YP_001189914.1	CDS	Pmen_4435	NC_009439.1	4862698	4862940	D	PFAM: protein of unknown function DUF1127; hypothetical protein	4862698..4862940	Pseudomonas mendocina ymp	5107130
YP_001189915.1	CDS	Pmen_4436	NC_009439.1	4863027	4863347	D	TIGRFAM: conserved hypothetical protein; hypothetical protein	4863027..4863347	Pseudomonas mendocina ymp	5107131
YP_001189916.1	CDS	Pmen_4437	NC_009439.1	4863632	4863952	D	TIGRFAM: conserved hypothetical protein; hypothetical protein	4863632..4863952	Pseudomonas mendocina ymp	5107132
YP_001189917.1	CDS	Pmen_4438	NC_009439.1	4863949	4865904	D	hypothetical protein	4863949..4865904	Pseudomonas mendocina ymp	5107133
YP_001189918.1	CDS	Pmen_4439	NC_009439.1	4865970	4866368	R	PFAM: glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein	complement(4865970..4866368)	Pseudomonas mendocina ymp	5107134
YP_001189919.1	CDS	Pmen_4440	NC_009439.1	4866437	4867342	D	PFAM: Auxin Efflux Carrier; auxin efflux carrier	4866437..4867342	Pseudomonas mendocina ymp	5107135
YP_001189920.1	CDS	Pmen_4441	NC_009439.1	4867376	4868155	R	amino acid ABC transporter periplasmic protein	complement(4867376..4868155)	Pseudomonas mendocina ymp	5107136
YP_001189921.1	CDS	Pmen_4442	NC_009439.1	4868296	4869426	D	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; twitching motility protein	4868296..4869426	Pseudomonas mendocina ymp	5107137
YP_001189922.1	CDS	Pmen_4443	NC_009439.1	4869551	4871191	D	TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Pi-cotransporter; sodium-dependent inorganic phosphate (Pi) transporter	4869551..4871191	Pseudomonas mendocina ymp	5107138
YP_001189923.1	CDS	Pmen_4444	NC_009439.1	4871193	4872698	R	PFAM: Xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease	complement(4871193..4872698)	Pseudomonas mendocina ymp	5107139
YP_001189924.1	CDS	Pmen_4445	NC_009439.1	4872973	4875531	R	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter, 4TM/12TM fusion protein	complement(4872973..4875531)	Pseudomonas mendocina ymp	5107140
YP_001189925.1	CDS	Pmen_4446	NC_009439.1	4875650	4876621	R	TIGRFAM: TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein	complement(4875650..4876621)	Pseudomonas mendocina ymp	5107141
YP_001189926.1	CDS	Pmen_4447	NC_009439.1	4876794	4877822	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	4876794..4877822	Pseudomonas mendocina ymp	5107142
YP_001189927.1	CDS	Pmen_4448	NC_009439.1	4877825	4878145	D	PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase	4877825..4878145	Pseudomonas mendocina ymp	5107143
YP_001189928.1	CDS	Pmen_4449	NC_009439.1	4878216	4878533	D	hypothetical protein	4878216..4878533	Pseudomonas mendocina ymp	5107144
YP_001189929.1	CDS	Pmen_4450	NC_009439.1	4878627	4880924	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase	4878627..4880924	Pseudomonas mendocina ymp	5107145
YP_001189930.1	CDS	Pmen_4451	NC_009439.1	4880921	4882516	D	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; methyl-accepting chemotaxis sensory transducer	4880921..4882516	Pseudomonas mendocina ymp	5107146
YP_001189931.1	CDS	Pmen_4452	NC_009439.1	4882641	4883642	D	PFAM: luciferase family protein; luciferase family protein	4882641..4883642	Pseudomonas mendocina ymp	5107147
YP_001189932.1	CDS	Pmen_4453	NC_009439.1	4883723	4884148	D	PFAM: OsmC family protein; OsmC family protein	4883723..4884148	Pseudomonas mendocina ymp	5107148
YP_001189933.1	CDS	Pmen_4454	NC_009439.1	4884169	4884588	R	hypothetical protein	complement(4884169..4884588)	Pseudomonas mendocina ymp	5107149
YP_001189934.1	CDS	Pmen_4455	NC_009439.1	4884674	4885735	D	aminopeptidase-like protein	4884674..4885735	Pseudomonas mendocina ymp	5107150
YP_001189935.1	CDS	Pmen_4456	NC_009439.1	4885799	4886029	D	PFAM: protein of unknown function DUF1161; hypothetical protein	4885799..4886029	Pseudomonas mendocina ymp	5107151
YP_001189936.1	CDS	Pmen_4457	NC_009439.1	4886113	4886760	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase	complement(4886113..4886760)	Pseudomonas mendocina ymp	5107152
YP_001189937.1	CDS	Pmen_4458	NC_009439.1	4886819	4887787	R	hypothetical protein	complement(4886819..4887787)	Pseudomonas mendocina ymp	5107153
YP_001189938.1	CDS	Pmen_4459	NC_009439.1	4888009	4888497	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(4888009..4888497)	Pseudomonas mendocina ymp	5107154
YP_001189939.1	CDS	Pmen_4460	NC_009439.1	4888494	4889036	R	carbonic anhydrase	complement(4888494..4889036)	Pseudomonas mendocina ymp	5107155
YP_001189940.1	CDS	Pmen_4461	NC_009439.1	4889173	4891221	D	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; oligopeptidase A	4889173..4891221	Pseudomonas mendocina ymp	5107156
YP_001189941.1	CDS	Pmen_4462	NC_009439.1	4891218	4891505	D	nucleic acid binding protein	4891218..4891505	Pseudomonas mendocina ymp	5107157
YP_001189942.1	CDS	Pmen_4463	NC_009439.1	4891532	4892620	D	hypothetical protein	4891532..4892620	Pseudomonas mendocina ymp	5107158
YP_001189943.1	CDS	Pmen_4464	NC_009439.1	4892636	4893427	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; AraC family transcriptional regulator	complement(4892636..4893427)	Pseudomonas mendocina ymp	5107159
YP_001189944.1	CDS	Pmen_4465	NC_009439.1	4893509	4894510	D	PFAM: Bile acid:sodium symporter; bile acid:sodium symporter	4893509..4894510	Pseudomonas mendocina ymp	5107160
YP_001189945.1	CDS	Pmen_4466	NC_009439.1	4894629	4895690	D	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein	4894629..4895690	Pseudomonas mendocina ymp	5107161
YP_001189946.1	CDS	Pmen_4467	NC_009439.1	4895782	4896687	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator	4895782..4896687	Pseudomonas mendocina ymp	5107162
YP_001189947.1	CDS	Pmen_4468	NC_009439.1	4897003	4898313	D	PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein	4897003..4898313	Pseudomonas mendocina ymp	5107163
YP_001189948.1	CDS	Pmen_4469	NC_009439.1	4898452	4899387	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	4898452..4899387	Pseudomonas mendocina ymp	5107164
YP_001189949.1	CDS	Pmen_4470	NC_009439.1	4899398	4900231	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	4899398..4900231	Pseudomonas mendocina ymp	5107165
YP_001189950.1	CDS	Pmen_4471	NC_009439.1	4900244	4901347	D	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein	4900244..4901347	Pseudomonas mendocina ymp	5107166
YP_001189951.1	CDS	Pmen_4472	NC_009439.1	4901374	4902849	D	PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; fructuronate reductase	4901374..4902849	Pseudomonas mendocina ymp	5107167
YP_001189952.1	CDS	Pmen_4473	NC_009439.1	4902853	4904352	D	TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; xylulokinase	4902853..4904352	Pseudomonas mendocina ymp	5107168
YP_001189953.1	CDS	Pmen_4474	NC_009439.1	4904381	4905328	D	PFAM: PfkB domain protein; ribokinase-like domain-containing protein	4904381..4905328	Pseudomonas mendocina ymp	5107169
YP_001189954.1	CDS	Pmen_4475	NC_009439.1	4905508	4906236	D	PFAM: carbonic anhydrase; carbonate dehydratase	4905508..4906236	Pseudomonas mendocina ymp	5107170
YP_001189955.1	CDS	Pmen_4476	NC_009439.1	4906354	4906656	R	hypothetical protein	complement(4906354..4906656)	Pseudomonas mendocina ymp	5107171
YP_001189956.1	CDS	Pmen_4477	NC_009439.1	4906658	4907599	R	PFAM: protein of unknown function DUF897; hypothetical protein	complement(4906658..4907599)	Pseudomonas mendocina ymp	5107172
YP_001189957.1	CDS	Pmen_4478	NC_009439.1	4907937	4909745	R	catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B	complement(4907937..4909745)	Pseudomonas mendocina ymp	5107173
YP_001189958.1	CDS	Pmen_4479	NC_009439.1	4909762	4911177	R	biotin carboxylase; with subunit B, the carboxyltansferase/biotincarboxyl carrier subunit catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit A	complement(4909762..4911177)	Pseudomonas mendocina ymp	5107174
YP_001189959.1	CDS	Pmen_4480	NC_009439.1	4911330	4912292	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	4911330..4912292	Pseudomonas mendocina ymp	5107175
YP_001189960.1	CDS	Pmen_4481	NC_009439.1	4912374	4913561	D	PFAM: protein of unknown function DUF182; hypothetical protein	4912374..4913561	Pseudomonas mendocina ymp	5107176
YP_001189961.1	CDS	Pmen_4482	NC_009439.1	4913767	4916010	R	PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase	complement(4913767..4916010)	Pseudomonas mendocina ymp	5107177
YP_001189962.1	CDS	Pmen_4483	NC_009439.1	4916019	4916477	R	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein	complement(4916019..4916477)	Pseudomonas mendocina ymp	5107178
YP_001189963.1	CDS	Pmen_4484	NC_009439.1	4916657	4916869	R	hypothetical protein	complement(4916657..4916869)	Pseudomonas mendocina ymp	5107179
YP_001189964.1	CDS	Pmen_4485	NC_009439.1	4916968	4917834	R	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); RpiR family transcriptional regulator	complement(4916968..4917834)	Pseudomonas mendocina ymp	5107180
YP_001189965.1	CDS	Pmen_4486	NC_009439.1	4918054	4919553	D	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase	4918054..4919553	Pseudomonas mendocina ymp	5107181
YP_001189966.1	CDS	Pmen_4487	NC_009439.1	4919837	4920355	D	PFAM: protein of unknown function DUF796; hypothetical protein	4919837..4920355	Pseudomonas mendocina ymp	5107182
YP_001189967.1	CDS	Pmen_4488	NC_009439.1	4920544	4922652	D	PFAM: Rhs element Vgr protein; Rhs element Vgr protein	4920544..4922652	Pseudomonas mendocina ymp	5107183
YP_001189968.1	CDS	Pmen_4489	NC_009439.1	4922628	4923494	D	hypothetical protein	4922628..4923494	Pseudomonas mendocina ymp	5107184
YP_001189969.1	CDS	Pmen_4490	NC_009439.1	4923506	4925740	D	PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM	4923506..4925740	Pseudomonas mendocina ymp	5107185
YP_001189970.1	CDS	Pmen_4491	NC_009439.1	4925830	4927131	D	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein	4925830..4927131	Pseudomonas mendocina ymp	5106949
YP_001189971.1	CDS	Pmen_4492	NC_009439.1	4927132	4927488	D	hypothetical protein	4927132..4927488	Pseudomonas mendocina ymp	5106950
YP_001189972.1	CDS	Pmen_4493	NC_009439.1	4927523	4928515	R	PFAM: protein of unknown function DUF323; hypothetical protein	complement(4927523..4928515)	Pseudomonas mendocina ymp	5106951
YP_001189973.1	CDS	Pmen_4494	NC_009439.1	4928694	4929944	R	PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter	complement(4928694..4929944)	Pseudomonas mendocina ymp	5106952
YP_001189974.1	CDS	Pmen_4495	NC_009439.1	4930091	4931143	R	PFAM: periplasmic solute binding protein; periplasmic solute binding protein	complement(4930091..4931143)	Pseudomonas mendocina ymp	5106953
YP_001189975.1	CDS	Pmen_4496	NC_009439.1	4931210	4931695	D	ferric uptake regulator family protein	4931210..4931695	Pseudomonas mendocina ymp	5106954
YP_001189976.1	CDS	Pmen_4497	NC_009439.1	4931692	4932480	D	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	4931692..4932480	Pseudomonas mendocina ymp	5106955
YP_001189977.1	CDS	Pmen_4498	NC_009439.1	4932480	4933268	D	PFAM: ABC-3 protein; ABC-3 protein	4932480..4933268	Pseudomonas mendocina ymp	5106956
YP_001189978.1	CDS	Pmen_4499	NC_009439.1	4933328	4934239	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	4933328..4934239	Pseudomonas mendocina ymp	5106957
YP_001189979.1	CDS	Pmen_4500	NC_009439.1	4934341	4935387	D	nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein	4934341..4935387	Pseudomonas mendocina ymp	5106958
YP_001189980.1	CDS	Pmen_4501	NC_009439.1	4935384	4936079	D	PFAM: isochorismatase hydrolase; isochorismatase hydrolase	4935384..4936079	Pseudomonas mendocina ymp	5106959
YP_001189981.1	CDS	Pmen_4502	NC_009439.1	4936144	4937028	D	PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein	4936144..4937028	Pseudomonas mendocina ymp	5106960
YP_001189982.1	CDS	metN	NC_009439.1	4937201	4938208	D	part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit	4937201..4938208	Pseudomonas mendocina ymp	5106961
YP_001189983.1	CDS	Pmen_4504	NC_009439.1	4938208	4938876	D	PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	4938208..4938876	Pseudomonas mendocina ymp	5106962
YP_001189984.1	CDS	Pmen_4505	NC_009439.1	4938934	4939704	D	PFAM: NLPA lipoprotein; NLPA lipoprotein	4938934..4939704	Pseudomonas mendocina ymp	5106963
YP_001189985.1	CDS	Pmen_4506	NC_009439.1	4940040	4940438	R	PFAM: protein of unknown function DUF454; hypothetical protein	complement(4940040..4940438)	Pseudomonas mendocina ymp	5106964
YP_001189986.1	CDS	Pmen_4507	NC_009439.1	4940431	4941021	R	PFAM: Haem oxygenase; heme oxygenase	complement(4940431..4941021)	Pseudomonas mendocina ymp	5106965
YP_001189987.1	CDS	Pmen_4508	NC_009439.1	4941261	4941782	D	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor	4941261..4941782	Pseudomonas mendocina ymp	5106966
YP_001189988.1	CDS	Pmen_4509	NC_009439.1	4941779	4942795	D	PFAM: FecR protein; putative FecR protein	4941779..4942795	Pseudomonas mendocina ymp	5106967
YP_001189989.1	CDS	Pmen_4510	NC_009439.1	4942902	4945505	D	TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	4942902..4945505	Pseudomonas mendocina ymp	5106968
YP_001189990.1	CDS	Pmen_4511	NC_009439.1	4945563	4946288	R	hypothetical protein	complement(4945563..4946288)	Pseudomonas mendocina ymp	5106969
YP_001189991.1	CDS	Pmen_4512	NC_009439.1	4946347	4949229	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase	complement(4946347..4949229)	Pseudomonas mendocina ymp	5106970
YP_001189992.1	CDS	uvrD	NC_009439.1	4949534	4951717	D	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II	4949534..4951717	Pseudomonas mendocina ymp	5106971
YP_001189993.1	CDS	Pmen_4514	NC_009439.1	4951741	4952835	D	PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	4951741..4952835	Pseudomonas mendocina ymp	5106972
YP_001189994.1	CDS	Pmen_4515	NC_009439.1	4952886	4953968	D	PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP	4952886..4953968	Pseudomonas mendocina ymp	5106973
YP_001189995.1	CDS	Pmen_4516	NC_009439.1	4954114	4954695	D	hypothetical protein	4954114..4954695	Pseudomonas mendocina ymp	5106974
YP_001189996.1	CDS	Pmen_4517	NC_009439.1	4954879	4955733	D	PFAM: import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44	4954879..4955733	Pseudomonas mendocina ymp	5106975
YP_001189997.1	CDS	Pmen_4518	NC_009439.1	4955800	4956249	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(4955800..4956249)	Pseudomonas mendocina ymp	5106976
YP_001189998.1	CDS	Pmen_4519	NC_009439.1	4956249	4957568	R	hypothetical protein	complement(4956249..4957568)	Pseudomonas mendocina ymp	5106977
YP_001189999.1	CDS	Pmen_4520	NC_009439.1	4957571	4958020	R	hypothetical protein	complement(4957571..4958020)	Pseudomonas mendocina ymp	5106978
YP_001190000.1	CDS	Pmen_4521	NC_009439.1	4958022	4959692	R	hypothetical protein	complement(4958022..4959692)	Pseudomonas mendocina ymp	5106979
YP_001190001.1	CDS	Pmen_4522	NC_009439.1	4959868	4960275	D	hypothetical protein	4959868..4960275	Pseudomonas mendocina ymp	5106980
YP_001190002.1	CDS	Pmen_4523	NC_009439.1	4960460	4961113	R	PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator	complement(4960460..4961113)	Pseudomonas mendocina ymp	5106981
YP_001190003.1	CDS	Pmen_4524	NC_009439.1	4961319	4962710	D	PFAM: aminotransferase class-III; aminotransferase	4961319..4962710	Pseudomonas mendocina ymp	5106982
YP_001190004.1	CDS	Pmen_4525	NC_009439.1	4962784	4964151	D	PFAM: glutamine synthetase, catalytic region; L-glutamine synthetase	4962784..4964151	Pseudomonas mendocina ymp	5106983
YP_001190005.1	CDS	Pmen_4526	NC_009439.1	4964159	4965412	R	hypothetical protein	complement(4964159..4965412)	Pseudomonas mendocina ymp	5106984
YP_001190006.1	CDS	Pmen_4527	NC_009439.1	4965409	4966125	R	hypothetical protein	complement(4965409..4966125)	Pseudomonas mendocina ymp	5106985
YP_001190007.1	CDS	Pmen_4528	NC_009439.1	4966231	4966716	D	PFAM: thioesterase superfamily protein; thioesterase superfamily protein	4966231..4966716	Pseudomonas mendocina ymp	5106986
YP_001190008.1	CDS	Pmen_4529	NC_009439.1	4966796	4967329	R	hypothetical protein	complement(4966796..4967329)	Pseudomonas mendocina ymp	5106987
YP_001190009.1	CDS	Pmen_4530	NC_009439.1	4967452	4967847	D	hypothetical protein	4967452..4967847	Pseudomonas mendocina ymp	5106988
YP_001190010.1	CDS	Pmen_4531	NC_009439.1	4967852	4968211	R	hypothetical protein	complement(4967852..4968211)	Pseudomonas mendocina ymp	5106989
YP_001190011.1	CDS	Pmen_4532	NC_009439.1	4968215	4969093	R	PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	complement(4968215..4969093)	Pseudomonas mendocina ymp	5106990
YP_001190012.1	CDS	Pmen_4533	NC_009439.1	4969130	4970104	R	PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; cobalamin synthesis protein, P47K	complement(4969130..4970104)	Pseudomonas mendocina ymp	5106991
YP_001190013.1	CDS	Pmen_4534	NC_009439.1	4970200	4970550	D	hypothetical protein	4970200..4970550	Pseudomonas mendocina ymp	5106992
YP_001190014.1	CDS	Pmen_4535	NC_009439.1	4970755	4971399	R	hypothetical protein	complement(4970755..4971399)	Pseudomonas mendocina ymp	5106993
YP_001190015.1	CDS	Pmen_4536	NC_009439.1	4971399	4972604	R	PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; cobalamin synthesis protein, P47K	complement(4971399..4972604)	Pseudomonas mendocina ymp	5106994
YP_001190016.1	CDS	Pmen_4537	NC_009439.1	4972620	4973042	R	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; TraR/DksA family transcriptional regulator	complement(4972620..4973042)	Pseudomonas mendocina ymp	5106995
YP_001190017.1	CDS	Pmen_4538	NC_009439.1	4973114	4974004	D	similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase	4973114..4974004	Pseudomonas mendocina ymp	5106996
YP_001190018.1	CDS	Pmen_4539	NC_009439.1	4974008	4974427	D	PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase	4974008..4974427	Pseudomonas mendocina ymp	5106997
YP_001190019.1	CDS	Pmen_4540	NC_009439.1	4974424	4974669	D	PFAM: protein of unknown function DUF37; hypothetical protein	4974424..4974669	Pseudomonas mendocina ymp	5106998
YP_001190020.1	CDS	Pmen_4541	NC_009439.1	4974662	4976002	D	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase	4974662..4976002	Pseudomonas mendocina ymp	5106999
YP_001190021.1	CDS	Pmen_4542	NC_009439.1	4976091	4979495	R	PFAM: Hemolysin-type calcium-binding region; peptidase M10A and M12B, matrixin and adamalysin; SMART: peptidase, metallopeptidase; serralysin	complement(4976091..4979495)	Pseudomonas mendocina ymp	5107000
YP_001190022.1	CDS	Pmen_4543	NC_009439.1	4979855	4981774	D	PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; hypothetical protein	4979855..4981774	Pseudomonas mendocina ymp	5107001
YP_001190023.1	CDS	Pmen_4544	NC_009439.1	4981771	4982478	D	3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon	4981771..4982478	Pseudomonas mendocina ymp	5107002
YP_001190024.1	CDS	Pmen_4545	NC_009439.1	4982511	4982750	D	hypothetical protein	4982511..4982750	Pseudomonas mendocina ymp	5107003
YP_001190025.1	CDS	Pmen_4546	NC_009439.1	4982884	4983786	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	complement(4982884..4983786)	Pseudomonas mendocina ymp	5107004
YP_001190026.1	CDS	Pmen_4547	NC_009439.1	4983931	4985319	D	TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine ammonia-lyase	4983931..4985319	Pseudomonas mendocina ymp	5107005
YP_001190027.1	CDS	Pmen_4548	NC_009439.1	4985650	4987305	R	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter	complement(4985650..4987305)	Pseudomonas mendocina ymp	5107006
YP_001190028.1	CDS	Pmen_4549	NC_009439.1	4987945	4988328	R	hypothetical protein	complement(4987945..4988328)	Pseudomonas mendocina ymp	5107007
YP_001190029.1	CDS	Pmen_4550	NC_009439.1	4988313	4989095	R	hypothetical protein	complement(4988313..4989095)	Pseudomonas mendocina ymp	5107008
YP_001190030.1	CDS	Pmen_4551	NC_009439.1	4989092	4989649	R	PFAM: PAAR repeat-containing protein; PAAR repeat-containing protein	complement(4989092..4989649)	Pseudomonas mendocina ymp	5107009
YP_001190031.1	CDS	Pmen_4552	NC_009439.1	4990023	4991690	R	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter	complement(4990023..4991690)	Pseudomonas mendocina ymp	5107010
YP_001190032.1	CDS	cls	NC_009439.1	4991972	4993417	D	catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase	4991972..4993417	Pseudomonas mendocina ymp	5107011
YP_001190033.1	CDS	Pmen_4554	NC_009439.1	4993536	4994267	D	hypothetical protein	4993536..4994267	Pseudomonas mendocina ymp	5107012
YP_001190034.1	CDS	Pmen_4555	NC_009439.1	4994250	4995461	R	PFAM: PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein	complement(4994250..4995461)	Pseudomonas mendocina ymp	5107013
YP_001190035.1	CDS	Pmen_4556	NC_009439.1	4995512	4997674	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor	complement(4995512..4997674)	Pseudomonas mendocina ymp	5107014
YP_001190036.1	CDS	Pmen_4557	NC_009439.1	4997767	4998360	R	hypothetical protein	complement(4997767..4998360)	Pseudomonas mendocina ymp	5107015
YP_001190037.1	CDS	Pmen_4558	NC_009439.1	4998425	4998832	R	hypothetical protein	complement(4998425..4998832)	Pseudomonas mendocina ymp	5107016
YP_001190038.1	CDS	Pmen_4559	NC_009439.1	4998829	5000856	R	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter, 4TM/12TM fusion protein	complement(4998829..5000856)	Pseudomonas mendocina ymp	5107017
YP_001190039.1	CDS	Pmen_4560	NC_009439.1	5001129	5002082	R	TIGRFAM: TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein	complement(5001129..5002082)	Pseudomonas mendocina ymp	5107018
YP_001190040.1	CDS	Pmen_4561	NC_009439.1	5002560	5003900	R	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator	complement(5002560..5003900)	Pseudomonas mendocina ymp	5107019
YP_001190041.1	CDS	Pmen_4562	NC_009439.1	5004062	5005837	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase	complement(5004062..5005837)	Pseudomonas mendocina ymp	5107020
YP_001190042.1	CDS	Pmen_4563	NC_009439.1	5005847	5007031	R	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; cyclopropane-fatty-acyl-phospholipid synthase	complement(5005847..5007031)	Pseudomonas mendocina ymp	5107021
YP_001190043.1	CDS	Pmen_4564	NC_009439.1	5007117	5008139	R	PFAM: transport system permease protein; inner-membrane translocator; transport system permease	complement(5007117..5008139)	Pseudomonas mendocina ymp	5107022
YP_001190044.1	CDS	Pmen_4565	NC_009439.1	5008136	5009164	R	PFAM: periplasmic binding protein; periplasmic binding protein	complement(5008136..5009164)	Pseudomonas mendocina ymp	5107023
YP_001190045.1	CDS	Pmen_4566	NC_009439.1	5009164	5010006	R	PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein	complement(5009164..5010006)	Pseudomonas mendocina ymp	5107024
YP_001190046.1	CDS	Pmen_4567	NC_009439.1	5010050	5012290	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent siderophore receptor	complement(5010050..5012290)	Pseudomonas mendocina ymp	5107025
YP_001190047.1	CDS	Pmen_4568	NC_009439.1	5012719	5013444	R	hypothetical protein	complement(5012719..5013444)	Pseudomonas mendocina ymp	5107026
YP_001190048.1	CDS	Pmen_4569	NC_009439.1	5013659	5014378	R	CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase	complement(5013659..5014378)	Pseudomonas mendocina ymp	5107027
YP_001190049.1	CDS	Pmen_4570	NC_009439.1	5014375	5015577	R	TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6Y C5,15-methyltransferase subunit CbiE	complement(5014375..5015577)	Pseudomonas mendocina ymp	5106881
YP_001190050.1	CDS	Pmen_4571	NC_009439.1	5015944	5017353	D	TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; precorrin-3B synthase	5015944..5017353	Pseudomonas mendocina ymp	5106882
YP_001190051.1	CDS	cobH	NC_009439.1	5017346	5017972	D	catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase	5017346..5017972	Pseudomonas mendocina ymp	5106883
YP_001190052.1	CDS	Pmen_4573	NC_009439.1	5017972	5018712	D	catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C(20)-methyltransferase	5017972..5018712	Pseudomonas mendocina ymp	5106884
YP_001190053.1	CDS	Pmen_4574	NC_009439.1	5018940	5020595	D	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; precorrin-6Y C5,15-methyltransferase/ precorrin-3 methyltransferase	5018940..5020595	Pseudomonas mendocina ymp	5106885
YP_001190054.1	CDS	Pmen_4575	NC_009439.1	5020694	5021674	R	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; transcriptional regulator	complement(5020694..5021674)	Pseudomonas mendocina ymp	5106886
YP_001190055.1	CDS	Pmen_4576	NC_009439.1	5021769	5022380	D	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	5021769..5022380	Pseudomonas mendocina ymp	5106887
YP_001190056.1	CDS	Pmen_4577	NC_009439.1	5022393	5022962	R	PFAM: flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein	complement(5022393..5022962)	Pseudomonas mendocina ymp	5106888
YP_001190057.1	CDS	Pmen_4578	NC_009439.1	5023046	5023840	R	PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR	complement(5023046..5023840)	Pseudomonas mendocina ymp	5106889
YP_001190058.1	CDS	Pmen_4579	NC_009439.1	5023930	5024841	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator	5023930..5024841	Pseudomonas mendocina ymp	5106890
YP_001190059.1	CDS	Pmen_4580	NC_009439.1	5024943	5026247	D	PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator superfamily transporter	5024943..5026247	Pseudomonas mendocina ymp	5106891
YP_001190060.1	CDS	Pmen_4581	NC_009439.1	5026415	5028571	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor	5026415..5028571	Pseudomonas mendocina ymp	5106892
YP_001190061.1	CDS	Pmen_4582	NC_009439.1	5028571	5029083	D	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	5028571..5029083	Pseudomonas mendocina ymp	5106893
YP_001190062.1	CDS	Pmen_4583	NC_009439.1	5029182	5029943	R	catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase	complement(5029182..5029943)	Pseudomonas mendocina ymp	5106894
YP_001190063.1	CDS	Pmen_4584	NC_009439.1	5029940	5030581	R	Mg-chelatase subunit ChlD-like protein	complement(5029940..5030581)	Pseudomonas mendocina ymp	5106895
YP_001190064.1	CDS	Pmen_4585	NC_009439.1	5030671	5031678	R	PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; protoporphyrin IX magnesium-chelatase	complement(5030671..5031678)	Pseudomonas mendocina ymp	5106896
YP_001190065.1	CDS	cobN	NC_009439.1	5031953	5035699	R	with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN	complement(5031953..5035699)	Pseudomonas mendocina ymp	5106897
YP_001190066.1	CDS	Pmen_4587	NC_009439.1	5035791	5036840	R	TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; cobalamin biosynthesis protein CobW	complement(5035791..5036840)	Pseudomonas mendocina ymp	5106898
YP_001190067.1	CDS	Pmen_4588	NC_009439.1	5037217	5037645	D	PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; cobalamin (vitamin B12) biosynthesis protein CbiG	5037217..5037645	Pseudomonas mendocina ymp	5106899
YP_001190068.1	CDS	Pmen_4589	NC_009439.1	5037642	5038397	D	TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase	5037642..5038397	Pseudomonas mendocina ymp	5106900
YP_001190069.1	CDS	Pmen_4590	NC_009439.1	5038619	5038849	R	hypothetical protein	complement(5038619..5038849)	Pseudomonas mendocina ymp	5106901
YP_001190070.1	CDS	Pmen_4591	NC_009439.1	5039021	5039233	D	hypothetical protein	5039021..5039233	Pseudomonas mendocina ymp	5106902
YP_001190071.1	CDS	Pmen_4592	NC_009439.1	5039230	5039985	D	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase	5039230..5039985	Pseudomonas mendocina ymp	5106903
YP_001190072.1	CDS	Pmen_4593	NC_009439.1	5040276	5041772	R	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase	complement(5040276..5041772)	Pseudomonas mendocina ymp	5106904
YP_001190073.1	CDS	Pmen_4594	NC_009439.1	5041839	5042993	R	PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase	complement(5041839..5042993)	Pseudomonas mendocina ymp	5106905
YP_001190074.1	CDS	Pmen_4595	NC_009439.1	5043426	5044199	D	PFAM: regulatory protein, IclR; IclR family transcriptional regulator	5043426..5044199	Pseudomonas mendocina ymp	5106906
YP_001190075.1	CDS	Pmen_4596	NC_009439.1	5044792	5045910	D	branched chain amino acid ABC transporter substrate-binding protein	5044792..5045910	Pseudomonas mendocina ymp	5106907
YP_001190076.1	CDS	Pmen_4597	NC_009439.1	5045922	5046521	D	PFAM: ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein	5045922..5046521	Pseudomonas mendocina ymp	5106908
YP_001190077.1	CDS	Pmen_4598	NC_009439.1	5046653	5048134	D	PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease	5046653..5048134	Pseudomonas mendocina ymp	5106909
YP_001190078.1	CDS	Pmen_4599	NC_009439.1	5048145	5049866	D	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	5048145..5049866	Pseudomonas mendocina ymp	5106910
YP_001190079.1	CDS	Pmen_4601	NC_009439.1	5050932	5051228	R	PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein	complement(5050932..5051228)	Pseudomonas mendocina ymp	5106728
YP_001190080.1	CDS	Pmen_4602	NC_009439.1	5051451	5053301	R	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase	complement(5051451..5053301)	Pseudomonas mendocina ymp	5106912
YP_001190081.1	CDS	Pmen_4603	NC_009439.1	5053312	5054082	R	PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; DeoR family transcriptional regulator	complement(5053312..5054082)	Pseudomonas mendocina ymp	5106913
YP_001190082.1	CDS	Pmen_4604	NC_009439.1	5054156	5054767	R	PFAM: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA	complement(5054156..5054767)	Pseudomonas mendocina ymp	5106914
YP_001190083.1	CDS	Pmen_4605	NC_009439.1	5054824	5056182	R	TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; glucosamine-1-phosphate N-acetyltransferase/UDP-N-acetylglucosamine pyrophosphorylase	complement(5054824..5056182)	Pseudomonas mendocina ymp	5106915
YP_001190084.1	CDS	atpC	NC_009439.1	5056305	5056739	R	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon	complement(5056305..5056739)	Pseudomonas mendocina ymp	5106916
YP_001190085.1	CDS	Pmen_4607	NC_009439.1	5056819	5058195	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta	complement(5056819..5058195)	Pseudomonas mendocina ymp	5106917
YP_001190086.1	CDS	Pmen_4608	NC_009439.1	5058243	5059106	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma	complement(5058243..5059106)	Pseudomonas mendocina ymp	5106918
YP_001190087.1	CDS	Pmen_4609	NC_009439.1	5059155	5060699	R	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha	complement(5059155..5060699)	Pseudomonas mendocina ymp	5106919
YP_001190088.1	CDS	Pmen_4610	NC_009439.1	5060715	5061251	R	TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+-transporting two-sector ATPase, delta (OSCP) subunit; ATP synthase F1 subunit delta	complement(5060715..5061251)	Pseudomonas mendocina ymp	5106920
YP_001190089.1	CDS	Pmen_4611	NC_009439.1	5061264	5061734	R	TIGRFAM: ATP synthase F0, B subunit; PFAM: H+-transporting two-sector ATPase, B/B' subunit; ATP synthase F0 subunit B	complement(5061264..5061734)	Pseudomonas mendocina ymp	5106921
YP_001190090.1	CDS	Pmen_4612	NC_009439.1	5061820	5062047	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C	complement(5061820..5062047)	Pseudomonas mendocina ymp	5106922
YP_001190091.1	CDS	Pmen_4613	NC_009439.1	5062113	5062931	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A	complement(5062113..5062931)	Pseudomonas mendocina ymp	5106923
YP_001190092.1	CDS	Pmen_4614	NC_009439.1	5062956	5063345	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I	complement(5062956..5063345)	Pseudomonas mendocina ymp	5106924
YP_001190093.1	CDS	Pmen_4615	NC_009439.1	5063477	5064346	R	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; chromosome segregation DNA-binding protein	complement(5063477..5064346)	Pseudomonas mendocina ymp	5106925
YP_001190094.1	CDS	Pmen_4616	NC_009439.1	5064358	5065146	R	PFAM: Cobyrinic acid a,c-diamide synthase; chromosome segregation ATPase	complement(5064358..5065146)	Pseudomonas mendocina ymp	5106926
YP_001190095.1	CDS	gidB	NC_009439.1	5065158	5065802	R	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB	complement(5065158..5065802)	Pseudomonas mendocina ymp	5106927
YP_001190096.1	CDS	Pmen_4618	NC_009439.1	5065802	5067694	R	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA	complement(5065802..5067694)	Pseudomonas mendocina ymp	5106928
YP_001190097.1	CDS	trmE	NC_009439.1	5068301	5069668	R	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE	complement(5068301..5069668)	Pseudomonas mendocina ymp	5106929
YP_001190098.1	CDS	Pmen_4620	NC_009439.1	5069826	5071571	R	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC	complement(5069826..5071571)	Pseudomonas mendocina ymp	5106930
YP_001190099.1	CDS	Pmen_4621	NC_009439.1	5071574	5071819	R	PFAM: protein of unknown function DUF37; hypothetical protein	complement(5071574..5071819)	Pseudomonas mendocina ymp	5106931
YP_001190100.1	CDS	rnpA	NC_009439.1	5071812	5072216	R	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P	complement(5071812..5072216)	Pseudomonas mendocina ymp	5106932
YP_001190101.1	CDS	Pmen_4623	NC_009439.1	5072230	5072364	R	PFAM: ribosomal protein L34; 50S ribosomal protein L34	complement(5072230..5072364)	Pseudomonas mendocina ymp	5106933
Pmen_R0001	tRNA	Pmen_R0001	NC_009439.1	237323	237399	R	tRNA-Arg	complement(237323..237399)	Pseudomonas mendocina ymp	5106198
Pmen_R0002	tRNA	Pmen_R0002	NC_009439.1	711349	711435	R	tRNA-Leu	complement(711349..711435)	Pseudomonas mendocina ymp	5109605
Pmen_R0003	tRNA	Pmen_R0003	NC_009439.1	711518	711604	R	tRNA-Leu	complement(711518..711604)	Pseudomonas mendocina ymp	5106940
Pmen_R0004	tRNA	Pmen_R0004	NC_009439.1	863123	863198	D	tRNA-Asn	863123..863198	Pseudomonas mendocina ymp	5108859
Pmen_R0005	tRNA	Pmen_R0005	NC_009439.1	863208	863284	D	tRNA-Pro	863208..863284	Pseudomonas mendocina ymp	5106942
Pmen_R0006	tRNA	Pmen_R0006	NC_009439.1	863291	863366	D	tRNA-Lys	863291..863366	Pseudomonas mendocina ymp	5106943
Pmen_R0009	tRNA	Pmen_R0009	NC_009439.1	1143601	1143677	D	tRNA-Ile	1143601..1143677	Pseudomonas mendocina ymp	5106946
Pmen_R0010	tRNA	Pmen_R0010	NC_009439.1	1143700	1143775	D	tRNA-Ala	1143700..1143775	Pseudomonas mendocina ymp	5106947
Pmen_R0013	tRNA	Pmen_R0013	NC_009439.1	1180764	1180840	D	tRNA-Met	1180764..1180840	Pseudomonas mendocina ymp	5107705
Pmen_R0014	tRNA	Pmen_R0014	NC_009439.1	1193458	1193532	R	tRNA-Gln	complement(1193458..1193532)	Pseudomonas mendocina ymp	5107715
Pmen_R0015	tRNA	Pmen_R0015	NC_009439.1	1193589	1193663	R	tRNA-Gln	complement(1193589..1193663)	Pseudomonas mendocina ymp	5106555
Pmen_R0017	tRNA	Pmen_R0017	NC_009439.1	1349585	1349657	R	tRNA-OTHER	complement(1349585..1349657)	Pseudomonas mendocina ymp	5108697
Pmen_R0018	tRNA	Pmen_R0018	NC_009439.1	1349656	1349728	R	tRNA-OTHER	complement(1349656..1349728)	Pseudomonas mendocina ymp	5106560
Pmen_R0019	tRNA	Pmen_R0019	NC_009439.1	1440964	1441039	D	tRNA-Lys	1440964..1441039	Pseudomonas mendocina ymp	5109098
Pmen_R0020	tRNA	Pmen_R0020	NC_009439.1	1474256	1474331	D	tRNA-Val	1474256..1474331	Pseudomonas mendocina ymp	5109130
Pmen_R0021	tRNA	Pmen_R0021	NC_009439.1	1474347	1474423	D	tRNA-Asp	1474347..1474423	Pseudomonas mendocina ymp	5106563
Pmen_R0022	tRNA	Pmen_R0022	NC_009439.1	1515345	1515418	R	tRNA-Gly	complement(1515345..1515418)	Pseudomonas mendocina ymp	5109407
Pmen_R0023	tRNA	Pmen_R0023	NC_009439.1	1827719	1827808	D	tRNA-Ser	1827719..1827808	Pseudomonas mendocina ymp	5109640
Pmen_R0024	tRNA	Pmen_R0024	NC_009439.1	1887040	1887116	R	tRNA-Met	complement(1887040..1887116)	Pseudomonas mendocina ymp	5109295
Pmen_R0025	tRNA	Pmen_R0025	NC_009439.1	1887232	1887308	R	tRNA-Met	complement(1887232..1887308)	Pseudomonas mendocina ymp	5106568
Pmen_R0026	tRNA	Pmen_R0026	NC_009439.1	1919791	1919867	R	tRNA-Pro	complement(1919791..1919867)	Pseudomonas mendocina ymp	5109322
Pmen_R0027	tRNA	Pmen_R0027	NC_009439.1	2072254	2072329	R	tRNA-Asn	complement(2072254..2072329)	Pseudomonas mendocina ymp	5110009
Pmen_R0028	tRNA	Pmen_R0028	NC_009439.1	2107158	2107233	D	tRNA-Glu	2107158..2107233	Pseudomonas mendocina ymp	5110044
Pmen_R0029	tRNA	Pmen_R0029	NC_009439.1	2107249	2107324	D	tRNA-Gly	2107249..2107324	Pseudomonas mendocina ymp	5106574
Pmen_R0030	tRNA	Pmen_R0030	NC_009439.1	2107370	2107445	D	tRNA-Glu	2107370..2107445	Pseudomonas mendocina ymp	5106575
Pmen_R0031	tRNA	Pmen_R0031	NC_009439.1	2107460	2107535	D	tRNA-Gly	2107460..2107535	Pseudomonas mendocina ymp	5106576
Pmen_R0032	tRNA	Pmen_R0032	NC_009439.1	2175065	2175141	D	tRNA-Val	2175065..2175141	Pseudomonas mendocina ymp	5109867
Pmen_R0033	tRNA	Pmen_R0033	NC_009439.1	2182775	2182851	D	tRNA-Pro	2182775..2182851	Pseudomonas mendocina ymp	5109875
Pmen_R0035	tRNA	Pmen_R0035	NC_009439.1	2194878	2194954	D	tRNA-Ile	2194878..2194954	Pseudomonas mendocina ymp	5106581
Pmen_R0036	tRNA	Pmen_R0036	NC_009439.1	2194977	2195052	D	tRNA-Ala	2194977..2195052	Pseudomonas mendocina ymp	5106582
Pmen_R0039	tRNA	Pmen_R0039	NC_009439.1	2264335	2264411	D	tRNA-Arg	2264335..2264411	Pseudomonas mendocina ymp	5109783
Pmen_R0040	tRNA	Pmen_R0040	NC_009439.1	2264450	2264525	D	tRNA-His	2264450..2264525	Pseudomonas mendocina ymp	5106586
Pmen_R0041	tRNA	Pmen_R0041	NC_009439.1	2264581	2264665	D	tRNA-Leu	2264581..2264665	Pseudomonas mendocina ymp	5106587
Pmen_R0042	tRNA	Pmen_R0042	NC_009439.1	2338212	2338301	D	tRNA-Ser	2338212..2338301	Pseudomonas mendocina ymp	5109844
Pmen_R0043	tRNA	Pmen_R0043	NC_009439.1	2620607	2620693	R	tRNA-Leu	complement(2620607..2620693)	Pseudomonas mendocina ymp	5106594
Pmen_R0044	tRNA	Pmen_R0044	NC_009439.1	2620814	2620887	R	tRNA-Cys	complement(2620814..2620887)	Pseudomonas mendocina ymp	5106595
Pmen_R0045	tRNA	Pmen_R0045	NC_009439.1	2620926	2621001	R	tRNA-Gly	complement(2620926..2621001)	Pseudomonas mendocina ymp	5106596
Pmen_R0046	tRNA	Pmen_R0046	NC_009439.1	2624297	2624384	R	tRNA-Ser	complement(2624297..2624384)	Pseudomonas mendocina ymp	5108216
Pmen_R0048	tRNA	Pmen_R0048	NC_009439.1	2998829	2998904	R	tRNA-Glu	complement(2998829..2998904)	Pseudomonas mendocina ymp	5107884
Pmen_R0049	tRNA	Pmen_R0049	NC_009439.1	2998953	2999028	R	tRNA-Ala	complement(2998953..2999028)	Pseudomonas mendocina ymp	5107267
Pmen_R0050	tRNA	Pmen_R0050	NC_009439.1	2999076	2999151	R	tRNA-Glu	complement(2999076..2999151)	Pseudomonas mendocina ymp	5107268
Pmen_R0051	tRNA	Pmen_R0051	NC_009439.1	2999200	2999275	R	tRNA-Ala	complement(2999200..2999275)	Pseudomonas mendocina ymp	5107269
Pmen_R0052	tRNA	Pmen_R0052	NC_009439.1	2999325	2999400	R	tRNA-Glu	complement(2999325..2999400)	Pseudomonas mendocina ymp	5107270
Pmen_R0053	tRNA	Pmen_R0053	NC_009439.1	2999461	2999536	R	tRNA-Ala	complement(2999461..2999536)	Pseudomonas mendocina ymp	5107271
Pmen_R0054	tRNA	Pmen_R0054	NC_009439.1	3182441	3182515	R	tRNA-Arg	complement(3182441..3182515)	Pseudomonas mendocina ymp	5107789
Pmen_R0055	tRNA	Pmen_R0055	NC_009439.1	3209444	3209520	R	tRNA-Arg	complement(3209444..3209520)	Pseudomonas mendocina ymp	5107816
Pmen_R0056	tRNA	Pmen_R0056	NC_009439.1	3209591	3209667	R	tRNA-Arg	complement(3209591..3209667)	Pseudomonas mendocina ymp	5107274
Pmen_R0057	tRNA	Pmen_R0057	NC_009439.1	3209712	3209788	R	tRNA-Arg	complement(3209712..3209788)	Pseudomonas mendocina ymp	5107275
Pmen_R0058	tRNA	Pmen_R0058	NC_009439.1	3209860	3209950	R	tRNA-Ser	complement(3209860..3209950)	Pseudomonas mendocina ymp	5107276
Pmen_R0059	tRNA	Pmen_R0059	NC_009439.1	3276658	3276734	R	tRNA-Asp	complement(3276658..3276734)	Pseudomonas mendocina ymp	5107672
Pmen_R0060	tRNA	Pmen_R0060	NC_009439.1	3276835	3276911	R	tRNA-Asp	complement(3276835..3276911)	Pseudomonas mendocina ymp	5107278
Pmen_R0061	tRNA	Pmen_R0061	NC_009439.1	3276944	3277019	R	tRNA-Val	complement(3276944..3277019)	Pseudomonas mendocina ymp	5107279
Pmen_R0062	tRNA	Pmen_R0062	NC_009439.1	3523269	3523344	R	tRNA-Thr	complement(3523269..3523344)	Pseudomonas mendocina ymp	5106516
Pmen_R0063	tRNA	Pmen_R0063	NC_009439.1	3882267	3882351	D	tRNA-Leu	3882267..3882351	Pseudomonas mendocina ymp	5105991
Pmen_R0064	tRNA	Pmen_R0064	NC_009439.1	3984674	3984750	R	tRNA-Met	complement(3984674..3984750)	Pseudomonas mendocina ymp	5106158
Pmen_R0065	tRNA	Pmen_R0065	NC_009439.1	3984848	3984933	R	tRNA-Leu	complement(3984848..3984933)	Pseudomonas mendocina ymp	5107290
Pmen_R0066	tRNA	Pmen_R0066	NC_009439.1	4303533	4303608	R	tRNA-Trp	complement(4303533..4303608)	Pseudomonas mendocina ymp	5106457
Pmen_R0067	tRNA	Pmen_R0067	NC_009439.1	4304940	4305015	R	tRNA-Thr	complement(4304940..4305015)	Pseudomonas mendocina ymp	5106458
Pmen_R0068	tRNA	Pmen_R0068	NC_009439.1	4305042	4305115	R	tRNA-Gly	complement(4305042..4305115)	Pseudomonas mendocina ymp	5107294
Pmen_R0069	tRNA	Pmen_R0069	NC_009439.1	4305140	4305224	R	tRNA-Tyr	complement(4305140..4305224)	Pseudomonas mendocina ymp	5107295
Pmen_R0072	tRNA	Pmen_R0072	NC_009439.1	4311508	4311583	R	tRNA-Ala	complement(4311508..4311583)	Pseudomonas mendocina ymp	5107298
Pmen_R0073	tRNA	Pmen_R0073	NC_009439.1	4311606	4311682	R	tRNA-Ile	complement(4311606..4311682)	Pseudomonas mendocina ymp	5107299
Pmen_R0075	tRNA	Pmen_R0075	NC_009439.1	4410691	4410767	D	tRNA-Met	4410691..4410767	Pseudomonas mendocina ymp	5106327
Pmen_R0076	tRNA	Pmen_R0076	NC_009439.1	4664813	4664888	D	tRNA-Phe	4664813..4664888	Pseudomonas mendocina ymp	5107035
Pmen_R0077	tRNA	Pmen_R0077	NC_009439.1	4677750	4677825	D	tRNA-Thr	4677750..4677825	Pseudomonas mendocina ymp	5107048
Pmen_R0080	tRNA	Pmen_R0080	NC_009439.1	4852735	4852810	R	tRNA-Ala	complement(4852735..4852810)	Pseudomonas mendocina ymp	5107306
Pmen_R0081	tRNA	Pmen_R0081	NC_009439.1	4852833	4852909	R	tRNA-Ile	complement(4852833..4852909)	Pseudomonas mendocina ymp	5107307
Pmen_R0008	rRNA	Pmen_R0008	NC_009439.1	1141980	1143527	D	16S ribosomal RNA	1141980..1143527	Pseudomonas mendocina ymp	5108635
Pmen_R0011	rRNA	Pmen_R0011	NC_009439.1	1144029	1146931	D	23S ribosomal RNA	1144029..1146931	Pseudomonas mendocina ymp	5106948
Pmen_R0012	rRNA	Pmen_R0012	NC_009439.1	1147079	1147198	D	5S ribosomal RNA	1147079..1147198	Pseudomonas mendocina ymp	5106551
Pmen_R0034	rRNA	Pmen_R0034	NC_009439.1	2193257	2194804	D	16S ribosomal RNA	2193257..2194804	Pseudomonas mendocina ymp	5109879
Pmen_R0037	rRNA	Pmen_R0037	NC_009439.1	2195306	2198208	D	23S ribosomal RNA	2195306..2198208	Pseudomonas mendocina ymp	5106583
Pmen_R0038	rRNA	Pmen_R0038	NC_009439.1	2198356	2198475	D	5S ribosomal RNA	2198356..2198475	Pseudomonas mendocina ymp	5106584
Pmen_R0070	rRNA	Pmen_R0070	NC_009439.1	4308086	4308200	R	5S ribosomal RNA	complement(4308086..4308200)	Pseudomonas mendocina ymp	5106461
Pmen_R0071	rRNA	Pmen_R0071	NC_009439.1	4308352	4311256	R	23S ribosomal RNA	complement(4308352..4311256)	Pseudomonas mendocina ymp	5107297
Pmen_R0074	rRNA	Pmen_R0074	NC_009439.1	4311767	4313303	R	16S ribosomal RNA	complement(4311767..4313303)	Pseudomonas mendocina ymp	5107300
Pmen_R0078	rRNA	Pmen_R0078	NC_009439.1	4849314	4849428	R	5S ribosomal RNA	complement(4849314..4849428)	Pseudomonas mendocina ymp	5107123
Pmen_R0079	rRNA	Pmen_R0079	NC_009439.1	4849579	4852483	R	23S ribosomal RNA	complement(4849579..4852483)	Pseudomonas mendocina ymp	5107305
Pmen_R0082	rRNA	Pmen_R0082	NC_009439.1	4852994	4854530	R	16S ribosomal RNA	complement(4852994..4854530)	Pseudomonas mendocina ymp	5106726