-- dump date   	20140620_010411
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_001666253.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_001666254.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_001666255.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_001666256.1	binds the polymerase to DNA and acts as a sliding clamp
YP_001666257.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_001666258.1	negatively supercoils closed circular double-stranded DNA
YP_001666259.1	KEGG: bur:Bcep18194_C6542 hypothetical protein
YP_001666260.1	PFAM: Integrase catalytic region; KEGG: bur:Bcep18194_C6543 hypothetical protein
YP_001666261.1	SMART: AAA ATPase; KEGG: bur:Bcep18194_C6544 hypothetical protein
YP_001666262.1	KEGG: pst:PSPTO_0030 hypothetical protein
YP_001666263.1	KEGG: pst:PSPTO_4755 hypothetical protein
YP_001666264.1	KEGG: pmy:Pmen_2213 hypothetical protein
YP_001666265.1	PFAM: protein of unknown function DUF411; KEGG: pmy:Pmen_2215 protein of unknown function DUF411
YP_001666266.1	KEGG: pmy:Pmen_2216 hypothetical protein
YP_001666267.1	PFAM: copper resistance B precursor; KEGG: pmy:Pmen_2217 copper resistance B precursor
YP_001666268.1	KEGG: psa:PST_3382 hypothetical protein
YP_001666269.1	TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pmy:Pmen_2219 copper-resistance protein, CopA family
YP_001666270.1	KEGG: pmy:Pmen_2220 hypothetical protein
YP_001666271.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psa:PST_3390 transcriptional activator CopR
YP_001666272.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pmy:Pmen_2235 heavy metal sensor signal transduction histidine kinase
YP_001666273.1	KEGG: pfo:Pfl_2393 hypothetical protein
YP_001666274.1	PFAM: outer membrane efflux protein; KEGG: pap:PSPA7_4013 heavy metal RND efflux outer membrane protein, CzcC family
YP_001666275.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pap:PSPA7_4014 heavy metal RND efflux membrane fusion protein, CzcB family
YP_001666276.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pap:PSPA7_4015 heavy metal efflux pump, CzcA family
YP_001666277.1	KEGG: pap:PSPA7_4016 heavy metal efflux system protein, putative
YP_001666278.1	KEGG: ajs:Ajs_1466 isoprenylcysteine carboxyl methyltransferase
YP_001666279.1	KEGG: ajs:Ajs_1465 hypothetical protein
YP_001666280.1	KEGG: ajs:Ajs_1464 hypothetical protein
YP_001666281.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: net:Neut_0066 40-residue YVTN family beta-propeller repeat protein
YP_001666282.1	PFAM: Heavy metal transport/detoxification protein; KEGG: pmy:Pmen_2225 heavy metal transport/detoxification protein
YP_001666283.1	KEGG: pmy:Pmen_2229 copper-translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein
YP_001666284.1	KEGG: pap:PSPA7_3842 probable transcriptional regulator
YP_001666285.1	KEGG: rxy:Rxyl_2639 hypothetical protein
YP_001666288.1	KEGG: pap:PSPA7_4526 hypothetical protein
YP_001666290.1	KEGG: sbn:Sbal195_4409 hypothetical protein
YP_001666291.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: pau:PA14_39020 hypothetical protein
YP_001666292.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pfl:PFL_5222 cobalt/cadmium/zinc transporter, CDF family
YP_001666293.1	KEGG: mms:mma_3055 hypothetical protein
YP_001666294.1	KEGG: psb:Psyr_4809 hypothetical protein
YP_001666295.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pmy:Pmen_1174 two component heavy metal response transcriptional regulator, winged helix family
YP_001666296.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_3148 heavy metal sensor histidine kinase
YP_001666299.1	PFAM: glycosyl transferase family 39; KEGG: pap:PSPA7_5537 hypothetical protein
YP_001666300.1	PFAM: glycosyl transferase family 2; KEGG: vha:VIBHAR_02791 hypothetical protein
YP_001666301.1	PFAM: GtrA family protein; KEGG: sde:Sde_0136 hypothetical protein
YP_001666302.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2828 transcriptional regulator, LysR family
YP_001666303.1	PFAM: phosphate-selective porin O and P; KEGG: pau:PA14_21620 phosphate-specific outer membrane porin OprP precursor
YP_001666307.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mes:Meso_4435 heavy metal translocating P-type ATPase
YP_001666308.1	KEGG: psp:PSPPH_4839 hypothetical protein
YP_001666309.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2024 RND divalent metal cation efflux transporter CzcA
YP_001666310.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2023 cobalt-zinc-cadmium resistance protein CzcB
YP_001666311.1	PFAM: outer membrane efflux protein; KEGG: pen:PSEEN2022 cobalt-zinc-cadmium resistance protein CzcC
YP_001666312.1	PFAM: outer membrane porin; KEGG: pen:PSEEN2340 porin, OprD family
YP_001666313.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_5221 DNA-binding heavy metal response regulator, putative
YP_001666314.1	KEGG: yen:YE1651 hypothetical protein
YP_001666316.1	KEGG: nwi:Nwi_0260 hypothetical protein
YP_001666318.1	KEGG: bxe:Bxe_B1530 hypothetical protein
YP_001666319.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN0005 sigma-54 dependent transcriptional regulator
YP_001666320.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN0007 metallo-beta-lactamase family protein
YP_001666321.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN0008 hypothetical protein
YP_001666322.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN0009 hypothetical protein
YP_001666323.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0010 transcriptional regulator, LysR family
YP_001666324.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: pen:PSEEN0012 oxidoreductase, GMC family
YP_001666325.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN0013 major facilitator family transporter
YP_001666326.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pen:PSEEN0014 N-acylhomoserine lactone synthase
YP_001666327.1	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate
YP_001666328.1	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001666329.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001666330.1	KEGG: pen:PSEEN0018 3-methyl-adenine DNA glycosylase I, constitutive; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase
YP_001666331.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
YP_001666332.1	SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN0021 hypothetical protein
YP_001666333.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_001666334.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: pen:PSEEN0023 ribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase)
YP_001666335.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
YP_001666336.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001666337.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pen:PSEEN0026 smf protein, DNA processing chain A
YP_001666338.1	PFAM: SUA5/yciO/yrdC domain; KEGG: pen:PSEEN0027 hypothetical protein
YP_001666339.1	KEGG: pen:PSEEN0028 hypothetical protein
YP_001666340.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN0029 quinone oxidoreductase, NADPH-dependent
YP_001666341.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_001666342.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_001666343.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: pen:PSEEN0032 sulfate transporter
YP_001666344.1	TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN0033 glycine betaine-binding protein
YP_001666345.1	TIGRFAM: choline-sulfatase; PFAM: sulfatase; KEGG: pen:PSEEN0034 choline sulfatase
YP_001666346.1	TIGRFAM: choline sulfate-utilization transcription factor; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0035 transcriptional regulator, LysR family
YP_001666347.1	KEGG: pfo:Pfl_0028 hypothetical protein
YP_001666348.1	PFAM: Dopa 45-dioxygenase; KEGG: pen:PSEEN0036 hypothetical protein
YP_001666349.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_001666350.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_001666351.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0039 transcriptional regulator TrpI
YP_001666352.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN0040 hypothetical protein
YP_001666353.1	PFAM: protein of unknown function DUF1458; KEGG: pen:PSEEN0041 hypothetical protein
YP_001666354.1	PFAM: protein of unknown function DUF1161; KEGG: pen:PSEEN0042 hypothetical protein
YP_001666355.1	PFAM: luciferase family protein; KEGG: pen:PSEEN0043 luciferase-like monooxygenase
YP_001666356.1	PFAM: OsmC family protein; KEGG: pap:PSPA7_0059 osmotically inducible protein OsmC
YP_001666357.1	PFAM: protein of unknown function DUF1161; KEGG: pen:PSEEN0044 hypothetical protein
YP_001666358.1	KEGG: pen:PSEEN0045 lipoprotein
YP_001666359.1	KEGG: pen:PSEEN0046 lipoprotein
YP_001666360.1	KEGG: pen:PSEEN0047 hypothetical protein
YP_001666361.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN0048 hydrolase, HAD family
YP_001666362.1	KEGG: pen:PSEEN0049 transferase
YP_001666363.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: pen:PSEEN0050 oligopeptidase A
YP_001666364.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0051 hypothetical protein
YP_001666365.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pen:PSEEN0052 hypothetical protein
YP_001666366.1	PFAM: carbonic anhydrase; KEGG: pen:PSEEN0053 carbonic anhydrase
YP_001666367.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN0054 sulfate transporter
YP_001666368.1	KEGG: pen:PSEEN0055 hypothetical protein
YP_001666369.1	TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: pen:PSEEN0056 cytochrome c oxidase, subunit II
YP_001666370.1	KEGG: pen:PSEEN0057 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001666371.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
YP_001666372.1	PFAM: cytochrome c oxidase subunit III; KEGG: pen:PSEEN0059 cytochrome c oxidase, subunit III
YP_001666373.1	KEGG: pen:PSEEN0060 hypothetical protein
YP_001666374.1	KEGG: pen:PSEEN0061 hypothetical protein
YP_001666375.1	KEGG: pen:PSEEN0062 hypothetical protein
YP_001666376.1	PFAM: cytochrome oxidase assembly; KEGG: pen:PSEEN0063 cytochrome oxidase assembly protein
YP_001666377.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_001666378.1	PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN0065 electron transport protein, Sco1/SenC family
YP_001666379.1	PFAM: NLPA lipoprotein; KEGG: pen:PSEEN0066 D-methionine-binding lipoprotein MetQ
YP_001666380.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0067 D-methionine ABC transporter MetI, membrane protein
YP_001666381.1	part of the metNIQ transport system for methionine
YP_001666382.1	Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide
YP_001666383.1	KEGG: pen:PSEEN0069 lipoprotein
YP_001666384.1	PFAM: ABC-3 protein; KEGG: pen:PSEEN0070 zinc ABC transporter, permease protein
YP_001666385.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0071 zinc ABC transporter, ATP-binding protein
YP_001666386.1	KEGG: pen:PSEEN0072 transcriptional repressor of Zn transport system Zur
YP_001666387.1	PFAM: periplasmic solute binding protein; KEGG: pen:PSEEN0073 zinc ABC transporter ZnuA, periplasmic binding protein
YP_001666388.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
YP_001666389.1	KEGG: pen:PSEEN0075 hypothetical protein
YP_001666390.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
YP_001666391.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_001666392.1	KEGG: pen:PSEEN0079 cytochrome c-type protein
YP_001666393.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN0080 cytochrome c4
YP_001666394.1	PFAM: DSBA oxidoreductase; KEGG: pen:PSEEN0081 thiol:disulfide interchange protein, periplasmic, alkali-inducible
YP_001666395.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pen:PSEEN0082 DNAse I-like hydrolase
YP_001666396.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN0083 diguanylate cyclase (GGDEF domain protein)
YP_001666397.1	PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: pen:PSEEN0084 N-acetylmuramoyl-L-alanine amidase
YP_001666398.1	PFAM: EAL domain protein; KEGG: pen:PSEEN0085 signal transduction protein; EAL domain protein
YP_001666399.1	KEGG: pen:PSEEN0086 alginate biosynthesis sensor protein KinB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001666400.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN0087 alginate biosynthesis response regulator AlgB
YP_001666401.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: psp:PSPPH_0251 osmotically inducible protein, putative
YP_001666402.1	KEGG: pen:PSEEN0089 hypothetical protein
YP_001666403.1	PFAM: protein of unknown function DUF1328; KEGG: pen:PSEEN0090 hypothetical protein
YP_001666404.1	PFAM: Inhibitor of vertebrate lysozyme; KEGG: pen:PSEEN0091 hypothetical protein
YP_001666405.1	carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system
YP_001666406.1	PFAM: nucleoside recognition domain protein; KEGG: pen:PSEEN0094 hypothetical protein
YP_001666407.1	KEGG: pen:PSEEN0095 lipoprotein
YP_001666408.1	PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN0096 hypothetical protein
YP_001666409.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0097 ABC transporter, ATP-binding protein
YP_001666410.1	PFAM: protein of unknown function DUF140; KEGG: pen:PSEEN0098 ABC transporter, permease protein
YP_001666411.1	KEGG: pen:PSEEN0099 hypothetical protein
YP_001666412.1	PFAM: peptidase M16 domain protein; KEGG: pen:PSEEN0100 metalloprotease, M16 family
YP_001666413.1	TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: pen:PSEEN0101 Na+/Pi cotransporter
YP_001666414.1	PFAM: Integral membrane protein TerC; KEGG: pen:PSEEN0103 efflux transporter, TerC family
YP_001666415.1	TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pen:PSEEN0104 citrate transporter
YP_001666416.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pen:PSEEN0106 hypothetical protein
YP_001666417.1	KEGG: pen:PSEEN0107 hypothetical protein
YP_001666418.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0108 hypothetical protein
YP_001666419.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0110 hypothetical protein
YP_001666420.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0111 hypothetical protein
YP_001666421.1	KEGG: pen:PSEEN0112 hypothetical protein
YP_001666422.1	KEGG: pen:PSEEN0113 acetyl-CoA hydrolase/transferase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase
YP_001666423.1	PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pen:PSEEN0114 pyridine nucleotide transhydrogenase, beta subunit
YP_001666424.1	KEGG: pen:PSEEN0115 pyridine proton-translocating NAD(P) transhydrogenase
YP_001666425.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: pen:PSEEN0116 proton-translocating NAD(P) transhydrogenase
YP_001666426.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0118 transcriptional regulator, LysR family
YP_001666427.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN0120 glutaryl-CoA dehydrogenase
YP_001666428.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pen:PSEEN0121 L-carnitine dehydratase/bile acid-inducible protein F
YP_001666429.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfo:Pfl_0121 TonB-dependent siderophore receptor
YP_001666430.1	PFAM: FecR protein; KEGG: pfl:PFL_0126 sigma factor regulatory protein, FecR/PupR family
YP_001666431.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pfo:Pfl_0123 sigma-24 (FecI)
YP_001666432.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN0137 transcriptional regulator, GntR family
YP_001666433.1	KEGG: pen:PSEEN0138 hypothetical protein
YP_001666434.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: pen:PSEEN0139 signal transduction protein; GGDEF/EAL domain
YP_001666435.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN0145 type I toxin efflux membrane fusion protein
YP_001666436.1	KEGG: pen:PSEEN0144 type I toxin efflux ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001666437.1	KEGG: pen:PSEEN0141 surface adhesion protein; TIGRFAM: conserved repeat domain protein; PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; SMART: Pyrrolo-quinoline quinone
YP_001666438.1	KEGG: pen:PSEEN0140 hypothetical protein
YP_001666439.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pen:PSEEN0146 taurine catabolic dioxygenase
YP_001666440.1	KEGG: pen:PSEEN0147 ABC transporter, periplasmic binding protein
YP_001666441.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0148 ABC transporter, ATP-binding protein
YP_001666442.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0149 ABC transporter, permease protein
YP_001666443.1	TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: psp:PSPPH_1885 hypothetical protein
YP_001666445.1	KEGG: psp:PSPPH_4491 hypothetical protein
YP_001666447.1	KEGG: pen:PSEEN0150 transcriptional factor-related protein
YP_001666448.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN0151 hypothetical protein
YP_001666449.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN0152 transcriptional activator, MarR family
YP_001666450.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: pen:PSEEN0153 efflux transporter, permease protein
YP_001666451.1	PFAM: protein of unknown function DUF1656; KEGG: pen:PSEEN0154 hypothetical protein
YP_001666452.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN0155 efflux transporter, membrane fusion protein
YP_001666453.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN0156 efflux transporter, outer membrane protein
YP_001666454.1	PFAM: cytochrome c class I; iron permease FTR1; KEGG: pen:PSEEN5342 cytochrome c protein
YP_001666455.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN5358 hypothetical protein
YP_001666456.1	KEGG: pen:PSEEN5357 hypothetical protein
YP_001666457.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN5356 glutathione S-transferase
YP_001666458.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_001666459.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: pen:PSEEN5354 alginate biosynthesis regulatory protein
YP_001666460.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_001666461.1	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane
YP_001666462.1	PFAM: protein of unknown function DUF513 hemX; KEGG: pen:PSEEN5351 uroporphyrin-III C-methyltransferase HemX
YP_001666463.1	PFAM: HemY domain protein; KEGG: pen:PSEEN5350 HemY protein
YP_001666464.1	PFAM: Disulphide bond formation protein DsbB; KEGG: pen:PSEEN0158 disulfide bond formation protein B1 (disulfide oxidoreductase 1)
YP_001666465.1	binds specifically to the major sigma factor sigma 70; active in stationary phase
YP_001666466.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN0160 peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_001666467.1	KEGG: pen:PSEEN0161 alginate regulatory protein AlgP
YP_001666468.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0162 hypothetical protein
YP_001666469.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0163 ABC transporter, ATP-binding protein
YP_001666470.1	KEGG: pen:PSEEN0164 hypothetical protein
YP_001666471.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN0165 transporter, LysE family
YP_001666472.1	PFAM: band 7 protein; KEGG: pen:PSEEN0166 hypothetical protein
YP_001666473.1	PFAM: protein of unknown function DUF107; KEGG: pen:PSEEN0167 hypothetical protein
YP_001666474.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pen:PSEEN0168 hypothetical protein
YP_001666475.1	KEGG: pen:PSEEN0169 hypothetical protein
YP_001666476.1	KEGG: pen:PSEEN0170 hypothetical protein
YP_001666477.1	PFAM: CBS domain containing protein; KEGG: pen:PSEEN0171 hypothetical protein
YP_001666478.1	TIGRFAM: dipeptidase; PFAM: peptidase M20; KEGG: pen:PSEEN0172 dipeptidase
YP_001666479.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0180 alkyl sulfate ester ABC transporter AstC, ATP-binding protein
YP_001666480.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0181 alkyl sulfate ester ABC transporter AstB, permease protein
YP_001666481.1	PFAM: NMT1/THI5 like domain protein; KEGG: pen:PSEEN0182 aryl sulfate ester ABC transporter AstR, periplasmic binding protein
YP_001666482.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: pen:PSEEN0183 alkylsulfatase AtsK
YP_001666483.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0184 transcritpional regulator, LysR family
YP_001666484.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN0186 TonB-dependent receptor
YP_001666485.1	PFAM: Arylsulfotransferase; KEGG: pen:PSEEN0187 arylsulfotransferase
YP_001666486.1	catalyzes the formation of succinate from succinate semialdehyde; NADP dependent
YP_001666487.1	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate
YP_001666488.1	PFAM: response regulator receiver; Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN0192 response regulator
YP_001666489.1	KEGG: pen:PSEEN0195 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001666490.1	PFAM: fatty acid desaturase; KEGG: pen:PSEEN0196 fatty acid desaturase
YP_001666491.1	KEGG: pen:PSEEN0197 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001666492.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0198 D-methionine ABC transporter, permease protein
YP_001666493.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0199 D-methionine ABC transporter MetN, ATP-binding protein
YP_001666494.1	PFAM: NLPA lipoprotein; KEGG: pen:PSEEN0200 D-methionine-binding periplasmic lipoprotein MetQ
YP_001666495.1	KEGG: pen:PSEEN0201 monooxygenase
YP_001666496.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN0202 acyl-CoA dehydrogenase
YP_001666497.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN0203 acyl-CoA dehydrogenase
YP_001666498.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0205 amino acid ABC transporter, ATP-binding protein
YP_001666499.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0206 amino acid ABC transporter, permease protein
YP_001666500.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pen:PSEEN0207 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001666501.1	KEGG: pen:PSEEN0208 serine O-acetyltransferase
YP_001666502.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: pen:PSEEN0209 choline/glycine betaine transporter, BCCT family
YP_001666503.1	catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers
YP_001666504.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0211 taurine ABC transporter, permease protein
YP_001666505.1	Part of the ABC transporter complex tauABC involved in taurine import
YP_001666506.1	KEGG: pen:PSEEN0213 taurine ABC transporter, periplasmic taurine-binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3
YP_001666507.1	PFAM: outer membrane porin; KEGG: pen:PSEEN0214 outer membrane porin OprE
YP_001666508.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN0215 thiol-specific antioxidant protein LsfA
YP_001666509.1	PFAM: NADPH-dependent FMN reductase; KEGG: pen:PSEEN0217 NAD(P)H-dependent FMN reductase
YP_001666510.1	KEGG: pen:PSEEN0218 sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001666511.1	catalyzes the release of sulfite from alkanesulfonates
YP_001666512.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0220 sulfonate ABC transporter, permease protein SsuC
YP_001666513.1	part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease
YP_001666514.1	PFAM: TOBE domain protein; KEGG: pen:PSEEN0222 organosulfonate utilization protein SsuF
YP_001666515.1	KEGG: pfo:Pfl_4544 hypothetical protein
YP_001666516.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN0223 transcriptional regulator, TetR family
YP_001666517.1	involved in the first step of glutathione biosynthesis
YP_001666518.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN0225 thioesterase
YP_001666519.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: pen:PSEEN0226 RNA-binding transcription accessory protein
YP_001666520.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation
YP_001666521.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN0228 osmolarity sensor protein EnvZ
YP_001666522.1	TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: pen:PSEEN0229 ribosomal protein S6 modification protein
YP_001666523.1	PFAM: protein of unknown function DUF785; KEGG: pen:PSEEN0230 hypothetical protein
YP_001666524.1	PFAM: RNA-binding S4 domain protein; KEGG: pen:PSEEN0231 heat shock protein 15, ribosome associated
YP_001666525.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: pen:PSEEN0232 hypothetical protein
YP_001666526.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_001666527.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_001666528.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN0236 thioesterase
YP_001666529.1	PFAM: 17 kDa surface antigen; KEGG: pen:PSEEN0239 hypothetical protein
YP_001666530.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pen:PSEEN0240 molybdopterin oxidoreductase, alpha subunit
YP_001666531.1	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: pen:PSEEN0241 formate dehydrogenase accessory protein FdhD
YP_001666532.1	PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: pen:PSEEN0243 hypothetical protein
YP_001666533.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN0244 hydrolase, haloacid dehalogenase family, subfamily IA, variant 3
YP_001666534.1	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose
YP_001666535.1	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: pen:PSEEN0246 3'(2'),5'-bisphosphate nucleotidase
YP_001666536.1	TIGRFAM: thioesterase domain protein; PFAM: Thioesterase putative; KEGG: pen:PSEEN0247 hypothetical protein
YP_001666537.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN0248 sigma-54 dependent response regulator
YP_001666538.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN0249 sensor histidine kinase
YP_001666539.1	KEGG: pen:PSEEN0251 dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_001666540.1	catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis
YP_001666541.1	KEGG: pfl:PFL_0309 hypothetical protein
YP_001666542.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN0263 TonB-dependent siderophore receptor
YP_001666543.1	PFAM: outer membrane porin; KEGG: pen:PSEEN0264 outer membrane protein OprE3
YP_001666544.1	PFAM: ferredoxin-dependent glutamate synthase; KEGG: pen:PSEEN0265 glutamate synthase, large subunit
YP_001666545.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_C7107 periplasmic sensor signal transduction histidine kinase
YP_001666546.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mfa:Mfla_2739 two component transcriptional regulator, winged helix family
YP_001666547.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bpt:Bpet3198 TonB-dependent outer membrane receptor
YP_001666548.1	KEGG: pen:PSEEN5227 hypothetical protein
YP_001666549.1	KEGG: pen:PSEEN5218 hypothetical protein
YP_001666551.1	KEGG: pen:PSEEN5211 hypothetical protein
YP_001666552.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5210 amino acid ABC transporter, permease protein
YP_001666553.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5209 amino acid ABC transporter, permease protein
YP_001666554.1	PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN5208 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001666555.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN5207 amino acid ABC transporter, ATP-binding protein
YP_001666556.1	TIGRFAM: GABA permease; PFAM: amino acid permease-associated region; KEGG: pen:PSEEN5205 gamma-aminobutyrate transporter
YP_001666557.1	KEGG: pen:PSEEN5204 hypothetical protein
YP_001666558.1	PFAM: protein of unknown function DUF344; KEGG: pen:PSEEN5203 polyphosphate kinase 2
YP_001666559.1	PFAM: Fe(II) trafficking protein YggX; KEGG: pfl:PFL_0357 hypothetical protein
YP_001666560.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: pen:PSEEN5199 A/G specific adenine glycosylase
YP_001666561.1	PFAM: AsmA family protein; KEGG: pen:PSEEN5198 AsmA protein
YP_001666562.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN5196 permease, MFS superfamily
YP_001666563.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_001666564.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_001666565.1	KEGG: pen:PSEEN5193 hypothetical protein
YP_001666566.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_001666567.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_001666568.1	KEGG: pen:PSEEN5190 glycine betaine/L-proline ABC transporter, ATP-binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; choline ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001666569.1	TIGRFAM: choline ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5189 glycine betaine/L-proline ABC transporter, permease protein
YP_001666570.1	TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN5188 glycine betaine/L-proline ABC transporter, periplasmic binding protein
YP_001666571.1	KEGG: pen:PSEEN5187 L-serine deaminase I; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_001666572.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pen:PSEEN5186 transcriptional regulator, AraC family
YP_001666573.1	KEGG: pen:PSEEN5185 hypothetical protein
YP_001666574.1	KEGG: pen:PSEEN5184 hypothetical protein
YP_001666575.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_001666576.1	PFAM: protein of unknown function DUF849; KEGG: pen:PSEEN5182 hypothetical protein
YP_001666577.1	TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN5181 substrate-binding region of ABC-type glycine transport system
YP_001666578.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pen:PSEEN5180 transcriptional regulator, AraC family
YP_001666579.1	PFAM: protein of unknown function DUF1311; KEGG: pen:PSEEN5179 hypothetical protein
YP_001666580.1	PFAM: peptidase M19 renal dipeptidase; KEGG: pen:PSEEN5178 dipeptidase
YP_001666581.1	KEGG: pen:PSEEN5177 hypothetical protein
YP_001666582.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: pen:PSEEN5176 oxidoreductase, FMN-binding
YP_001666583.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pen:PSEEN5175 iron-sulfur cluster-binding protein
YP_001666584.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: pen:PSEEN5174 electron transfer flavoprotein, alpha subunit
YP_001666585.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: pen:PSEEN5173 electron transfer flavoprotein, beta subunit
YP_001666586.1	KEGG: psb:Psyr_4720 hypothetical protein
YP_001666587.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pen:PSEEN5169 iron-sulfur cluster-binding protein, Rieske family
YP_001666588.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN5168 oxidoreductase, FAD-binding
YP_001666589.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5167 methyl-accepting chemotaxis transducer
YP_001666590.1	KEGG: pen:PSEEN5166 hypothetical protein
YP_001666591.1	PFAM: protein of unknown function DUF710; KEGG: pen:PSEEN5165 hypothetical protein
YP_001666592.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5164 methyl-accepting chemotaxis transducer
YP_001666593.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pen:PSEEN5163 low-specificity L-threonine aldolase
YP_001666594.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001666595.1	TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN5161 sarcosine oxidase beta subunit
YP_001666596.1	TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: pen:PSEEN5160 sarcosine oxidase, delta subunit
YP_001666597.1	TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN5159 sarcosine oxidase (alpha subunit) oxidoreductase protein
YP_001666598.1	TIGRFAM: sarcosine oxidase, gamma subunit family; PFAM: Sarcosine oxidase gamma subunit; KEGG: pen:PSEEN5158 sarcosine oxidase, gamma subunit
YP_001666599.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_001666600.1	TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN5156 formaldehyde dehydrogenase, glutathione-independent
YP_001666601.1	KEGG: psb:Psyr_0343 hypothetical protein
YP_001666602.1	KEGG: psb:Psyr_4870 hypothetical protein
YP_001666603.1	KEGG: pen:PSEEN5155 hypothetical protein
YP_001666604.1	PFAM: amino acid permease-associated region; KEGG: pae:PA0322 probable transporter
YP_001666605.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pen:PSEEN5154 acyltransferase
YP_001666606.1	PFAM: protein of unknown function DUF785; KEGG: pen:PSEEN5153 hypothetical protein
YP_001666607.1	response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation
YP_001666608.1	part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation
YP_001666609.1	PFAM: Inner membrane CreD family protein; KEGG: pen:PSEEN5150 tolerance to colicin E2
YP_001666610.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN5149 glutathione S-transferase
YP_001666611.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
YP_001666612.1	KEGG: pen:PSEEN5147 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001666613.1	KEGG: pen:PSEEN5146 dihydrolipoamide S-acetyltransferase, E2 component of the pyruvate dehydrogenase complex; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein
YP_001666614.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_001666615.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
YP_001666616.1	TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: pen:PSEEN5143 ADP-heptose; LPS heptosyltransferase II
YP_001666617.1	TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: pen:PSEEN5142 ADP-heptose; LPS heptosyl transferase I
YP_001666618.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN5141 glucosyltransferase I
YP_001666619.1	PFAM: lipopolysaccharide kinase; KEGG: pen:PSEEN5140 lipopolysaccharide core biosynthesis; kinase for core heptose of lipopolysaccharide
YP_001666620.1	PFAM: lipopolysaccharide kinase; KEGG: pen:PSEEN5139 heptose kinase WapP
YP_001666621.1	PFAM: lipopolysaccharide kinase; KEGG: pen:PSEEN5138 heptose kinase WapQ
YP_001666622.1	KEGG: pen:PSEEN5137 hypothetical protein
YP_001666623.1	KEGG: pen:PSEEN5136 hypothetical protein
YP_001666624.1	PFAM: PepSY-associated TM helix domain protein; KEGG: pen:PSEEN5135 hypothetical protein
YP_001666625.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN5134 TonB-dependent siderophore receptor
YP_001666626.1	PFAM: FecR protein; KEGG: pen:PSEEN5132 FecR-like transmembrane sensor
YP_001666627.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in P. aeruginosa this sigma factor regulates the production of the ferrichrome outer membrane receptor FiuA.
YP_001666628.1	KEGG: pen:PSEEN5130 exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_001666629.1	PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: pen:PSEEN5129 nucleotidyltransferase, CBS domain/cAMP binding
YP_001666630.1	PFAM: response regulator receiver; KEGG: pen:PSEEN5128 response regulator
YP_001666631.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_001666632.1	PFAM: amino acid-binding ACT domain protein; KEGG: pen:PSEEN5126 hypothetical protein
YP_001666633.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN5125 RarD protein
YP_001666634.1	KEGG: psb:Psyr_2041 hypothetical protein
YP_001666635.1	KEGG: psb:Psyr_2041 hypothetical protein
YP_001666636.1	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages
YP_001666637.1	TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: pen:PSEEN5123 molybdate transport regulator ModE
YP_001666638.1	PFAM: phosphoribosyltransferase; KEGG: pen:PSEEN5122 competence protein ComF
YP_001666639.1	KEGG: pen:PSEEN5121 biotin synthetase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_001666640.1	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine
YP_001666641.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN5119 biotin biosynthesis BioH
YP_001666642.1	TIGRFAM: biotin biosynthesis protein BioC; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN5118 biotin biosynthesis protein BioC
YP_001666643.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
YP_001666644.1	KEGG: pen:PSEEN5116 hypothetical protein
YP_001666645.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pen:PSEEN5115 acyl-CoA dehydrogenase
YP_001666646.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN5114 diguanylate cyclase (GGDEF domain)
YP_001666647.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN5113 acyl-CoA dehydrogenase
YP_001666648.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5111 transcriptional regulator, LysR family
YP_001666649.1	PFAM: aminotransferase class-III; KEGG: pen:PSEEN5110 acetylornithine aminotransferase
YP_001666650.1	PFAM: protein of unknown function UPF0057; KEGG: pen:PSEEN5109 hypothetical protein
YP_001666651.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: pen:PSEEN0393 prolyl oligopeptidase
YP_001666652.1	KEGG: pen:PSEEN0394 coenzyme PQQ synthesis protein E (coenzyme PQQ synthesis protein III); TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001666653.1	with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone
YP_001666654.1	Required in the synthesis of PPQ, but its exact function is unknown
YP_001666655.1	possibly involved in transport of pyrroloquinoline quinone transport
YP_001666656.1	TIGRFAM: coenzyme PQQ biosynthesis protein PqqF; PFAM: peptidase M16 domain protein; KEGG: pen:PSEEN0399 coenzyme PQQ synthesis protein F
YP_001666657.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN0400 amidohydrolase, carbon-nitrogen family
YP_001666658.1	PFAM: amine oxidase; KEGG: pen:PSEEN0401 amino oxydase
YP_001666659.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN0407 transcriptional regulator, AsnC family
YP_001666660.1	KEGG: plu:plu2021 hypothetical protein
YP_001666661.1	KEGG: psa:PST_3443 hypothetical protein
YP_001666663.1	KEGG: pst:PSPTO_0535 site-specific recombinase, phage integrase family
YP_001666664.1	KEGG: pen:PSEEN0412 sensory box proten ; GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; extracellular solute-binding protein family 3; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001666665.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
YP_001666666.1	synthesizes RNA primers at the replication forks
YP_001666667.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_001666668.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_001666669.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
YP_001666670.1	TIGRFAM: dihydroneopterin aldolase; KEGG: pen:PSEEN0419 dihydroneopterin aldolase
YP_001666671.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: pen:PSEEN0420 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_001666672.1	catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases
YP_001666673.1	PFAM: SpoVR family protein; KEGG: pen:PSEEN0422 hypothetical protein
YP_001666674.1	PFAM: protein of unknown function DUF444; KEGG: pen:PSEEN0423 hypothetical protein
YP_001666675.1	PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: pen:PSEEN0424 serine protein kinase
YP_001666676.1	belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine
YP_001666677.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
YP_001666678.1	protein associated with Co2+ and Mg2+ efflux
YP_001666679.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_001666680.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_001666681.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: pen:PSEEN0430 peptidyl-prolyl cis-trans isomerase A
YP_001666682.1	PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: pen:PSEEN0431 organic solvent tolerance protein precursor OstA
YP_001666683.1	PFAM: aminoglycoside phosphotransferase; KEGG: pen:PSEEN0432 phosphotransferase
YP_001666684.1	PFAM: Nucleotidyl transferase; KEGG: pen:PSEEN0433 nucleotidyltransferase
YP_001666685.1	PFAM: heat shock protein DnaJ domain protein; KEGG: pen:PSEEN0434 DnaJ-like co-chaperone
YP_001666686.1	KEGG: pen:PSEEN0435 hypothetical protein
YP_001666687.1	KEGG: pen:PSEEN0436 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; extracellular solute-binding protein family 3
YP_001666688.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN0437 DNA-binding response regulator, LuxR family
YP_001666689.1	KEGG: pen:PSEEN0438 polyamine ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001666690.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN0439 polyamine ABC transporter, periplasmic polyamine-binding protein
YP_001666691.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0440 polyamine ABC transporter, permease protein
YP_001666692.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0441 polyamine ABC transporter, permease protein
YP_001666693.1	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate
YP_001666694.1	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate
YP_001666695.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
YP_001666696.1	KEGG: pen:PSEEN0445 esterase EstA precursor; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: lipolytic protein G-D-S-L family; Autotransporter beta- domain protein
YP_001666697.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
YP_001666698.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001666699.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_001666700.1	KEGG: pen:PSEEN0450 hypothetical protein
YP_001666701.1	complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons
YP_001666702.1	PFAM: OsmC family protein; KEGG: pen:PSEEN0452 hypothetical protein
YP_001666703.1	KEGG: pen:PSEEN0454 hypothetical protein
YP_001666704.1	KEGG: pen:PSEEN0455 ubiquinone biosynthesis protein COQ7
YP_001666705.1	PFAM: histidine triad (HIT) protein; KEGG: pen:PSEEN0456 hypothetical protein
YP_001666706.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN0457 oxidoreductase, short chain dehydrogenase/reductase family
YP_001666707.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: pen:PSEEN0458 dioxygenases related to 2-nitropropane dioxygenase
YP_001666708.1	PFAM: conserved hypothetical protein; KEGG: pfo:Pfl_5103 hypothetical protein
YP_001666709.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
YP_001666710.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
YP_001666711.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_001666712.1	PFAM: peptidase M23B; Opacity-associated protein A; Opacity-associated protein A domain protein; KEGG: pen:PSEEN0463 peptidase, M23/M37 family
YP_001666713.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_001666714.1	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon
YP_001666715.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
YP_001666716.1	KEGG: pen:PSEEN0473 hypothetical protein
YP_001666717.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001666718.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_001666719.1	Modulates Rho-dependent transcription termination
YP_001666720.1	binds directly to 23S ribosomal RNA
YP_001666721.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_001666722.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_001666723.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_001666724.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_001666725.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_001666726.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_001666727.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_001666728.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001666729.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001666730.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_001666731.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_001666732.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_001666733.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_001666734.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_001666735.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_001666736.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_001666737.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_001666738.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_001666739.1	one of the stabilizing components for the large ribosomal subunit
YP_001666740.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_001666741.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_001666742.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_001666743.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_001666744.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_001666745.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_001666746.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_001666747.1	binds 5S rRNA along with protein L5 and L25
YP_001666748.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_001666749.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_001666750.1	late assembly protein
YP_001666751.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_001666752.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_001666753.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_001666754.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_001666755.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001666756.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_001666757.1	PFAM: Catalase domain protein; KEGG: pen:PSEEN0517 catalase (hydroperoxidase II)KatA
YP_001666758.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: pen:PSEEN0518 bacterioferritin
YP_001666759.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
YP_001666760.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0520 transporter, MFS superfamily
YP_001666761.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
YP_001666762.1	PFAM: integrase family protein; KEGG: tcx:Tcr_0328 phage integrase
YP_001666763.1	PFAM: integrase family protein; KEGG: prw:PsycPRwf_1125 phage integrase family protein
YP_001666764.1	PFAM: integrase family protein; KEGG: tcx:Tcr_0330 putative integrase
YP_001666765.1	KEGG: prw:PsycPRwf_1123 hypothetical protein
YP_001666766.1	PFAM: helix-turn-helix domain protein; KEGG: pst:PSPTO_4630 transcriptional regulator, PbsX family
YP_001666768.1	PFAM: IS66 Orf2 family protein; KEGG: pst:PSPTO_3221 ISPsy5, Orf1
YP_001666769.1	PFAM: transposase IS66; KEGG: pst:PSPTO_5591 ISPsy5, transposase
YP_001666770.1	KEGG: pau:PA14_35850 hypothetical protein
YP_001666771.1	KEGG: mmr:Mmar10_2162 hypothetical protein
YP_001666772.1	KEGG: pmy:Pmen_4034 hypothetical protein
YP_001666773.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: mmr:Mmar10_2163 DNA (cytosine-5-)-methyltransferase
YP_001666774.1	KEGG: mmr:Mmar10_2161 hypothetical protein
YP_001666775.1	TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: nha:Nham_2517 DNA mismatch endonuclease vsr
YP_001666776.1	KEGG: ajs:Ajs_2206 hypothetical protein
YP_001666777.1	KEGG: rfr:Rfer_0335 hypothetical protein
YP_001666778.1	PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: pen:PSEEN0563 formate dehydrogenase-O, major subunit
YP_001666779.1	KEGG: pen:PSEEN0564 formate dehydrogenase-N major subunit, anaerobic; selenopeptide; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region
YP_001666780.1	TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: pen:PSEEN0565 formate dehydrogenase-O, Fe-S subunit
YP_001666781.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: pen:PSEEN0566 formate dehydrogenase-O, cytochrome b556 (FDO) subunit
YP_001666782.1	TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: pen:PSEEN0567 formate dehydrogenase formation protein
YP_001666783.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
YP_001666784.1	TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: pen:PSEEN0569 selenocysteinyl-tRNA-specific translation factor
YP_001666785.1	PFAM: Asparaginase/glutaminase; KEGG: pen:PSEEN0570 L-asparaginase, type I
YP_001666786.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: pen:PSEEN0571 sodium/alanine symporter
YP_001666787.1	KEGG: pen:PSEEN0572 transcriptional regulator, Cro/CI family
YP_001666788.1	KEGG: pen:PSEEN0573 hypothetical protein
YP_001666789.1	PFAM: protein of unknown function DUF81; KEGG: nme:NMB0432 hypothetical protein
YP_001666792.1	PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: pen:PSEEN0574 dTDP-4-rhamnose reductase-related protein
YP_001666793.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: pen:PSEEN0575 NAD-dependent epimerase/dehydratase family protein
YP_001666794.1	PFAM: helix-turn-helix HxlR type; KEGG: pen:PSEEN0576 hypothetical protein
YP_001666795.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0577 transport protein, MFS superfamily
YP_001666796.1	PFAM: OmpW family protein; KEGG: pen:PSEEN0578 outer membrane protein OprG
YP_001666797.1	KEGG: pen:PSEEN0579 lipoprotein
YP_001666798.1	PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN0580 ABC efflux transporter, permease protein
YP_001666799.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0581 ABC transporter, ATP binding component
YP_001666800.1	KEGG: pen:PSEEN0582 hypothetical protein
YP_001666801.1	KEGG: pen:PSEEN0583 hypothetical protein
YP_001666803.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pen:PSEEN0584 thioredoxin
YP_001666804.1	PFAM: methyltransferase small; Methyltransferase type 12; KEGG: pen:PSEEN0585 hypothetical protein
YP_001666805.1	KEGG: pen:PSEEN0586 hypothetical protein
YP_001666806.1	PFAM: ATP-cone domain protein; KEGG: pen:PSEEN0587 hypothetical protein
YP_001666807.1	KEGG: pen:PSEEN0588 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein
YP_001666808.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_001666809.1	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis
YP_001666810.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_001666811.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_001666812.1	catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP
YP_001666813.1	PFAM: phosphatidylglycerophosphatase A; KEGG: pen:PSEEN0594 phosphatidylglycerophosphatase A
YP_001666814.1	KEGG: pen:PSEEN0595 hypothetical protein
YP_001666815.1	catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate
YP_001666816.1	KEGG: pen:PSEEN0597 hypothetical protein
YP_001666817.1	PFAM: periplasmic binding protein; KEGG: pen:PSEEN0598 periplasmic cobalamin-binding protein HutB
YP_001666818.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN0599 cobalamine TonB-dependent receptor
YP_001666819.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_001666820.1	PFAM: Polyprenyl synthetase; KEGG: pen:PSEEN0601 geranyltranstransferase
YP_001666821.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
YP_001666822.1	DHBP synthase; functions during riboflavin biosynthesis
YP_001666823.1	PFAM: protein of unknown function UPF0027; KEGG: pen:PSEEN0615 hypothetical protein
YP_001666824.1	PFAM: putative esterase; KEGG: pen:PSEEN0617 hypothetical protein
YP_001666825.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pae:PA2687 two-component sensor PfeS
YP_001666826.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pae:PA2686 two-component response regulator PfeR
YP_001666827.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: csa:Csal_2539 TonB-dependent siderophore receptor
YP_001666828.1	PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_0689 glycosyl transferase, group 1
YP_001666829.1	KEGG: pen:PSEEN0625 transcriptional regulator
YP_001666830.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_001666831.1	PFAM: protein of unknown function DUF980; KEGG: pen:PSEEN0627 zinc-dependent peptidase (M family)
YP_001666832.1	PFAM: SNARE associated Golgi protein; KEGG: pen:PSEEN0628 hypothetical protein
YP_001666833.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0630 acetyltransferase, GNAT family
YP_001666834.1	catalyzes the formation of acetaldehyde from ethanolamine
YP_001666835.1	PFAM: Ethanolamine ammonia lyase large subunit; KEGG: pen:PSEEN0632 ethanolamine ammonia-lyase, heavy chain
YP_001666836.1	TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: pen:PSEEN0633 transport protein
YP_001666837.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN0634 NAD+ dependent aldehyde dehydrogenase
YP_001666838.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN0635 sigma-54 dependent transcriptional regulator
YP_001666839.1	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: pen:PSEEN0636 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase
YP_001666840.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: pen:PSEEN0637 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_001666841.1	PFAM: protein of unknown function DUF1375; KEGG: pen:PSEEN0638 hypothetical protein
YP_001666842.1	KEGG: pen:PSEEN4841 hypothetical protein
YP_001666843.1	PFAM: Peptidase C13, legumain asparaginyl peptidase; MORN repeat-containing protein; KEGG: pen:PSEEN4840 hypothetical protein
YP_001666844.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pap:PSPA7_0934 2,3-butanediol dehydrogenase
YP_001666845.1	PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: pap:PSPA7_0935 probable hydrolase
YP_001666846.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: pap:PSPA7_0936 acetoin catabolism protein AcoB
YP_001666847.1	PFAM: dehydrogenase E1 component; KEGG: pfl:PFL_2170 acetoin dehydrogenase E1 component, alpha subunit
YP_001666848.1	PFAM: ATP-NAD/AcoX kinase; KEGG: pae:PA4149 hypothetical protein
YP_001666849.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: pap:PSPA7_0941 transcriptional regulator AcoR
YP_001666850.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_001666851.1	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_001666852.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001666853.1	two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm
YP_001666854.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN4853 methyl-accepting chemotaxis transducer for inorganic phosphate CtpL
YP_001666855.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: pen:PSEEN4852 diguanylate cyclase (GGDEF domain)/response regulator
YP_001666856.1	KEGG: pen:PSEEN4851 hypothetical protein
YP_001666857.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN4850 IPP isomerase type 1
YP_001666858.1	involved in start site selection during the initiation of translation
YP_001666859.1	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis
YP_001666860.1	KEGG: pen:PSEEN4846 hypothetical protein
YP_001666861.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pen:PSEEN4845 DNA-damage-inducible protein F
YP_001666862.1	PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: pen:PSEEN4844 hypothetical protein
YP_001666863.1	KEGG: pen:PSEEN4843 hypothetical protein
YP_001666864.1	penicillin-insensitive transglycosylase/transpeptidase
YP_001666865.1	PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: pen:PSEEN0640 hypothetical protein
YP_001666866.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pen:PSEEN0653 DNA-binding response regulator, LuxR family
YP_001666867.1	PFAM: peptidase A24A prepilin type IV; KEGG: pen:PSEEN0654 prepilin peptidase; typeII/IV secretion
YP_001666868.1	KEGG: pen:PSEEN0658 lipoprotein
YP_001666869.1	KEGG: pen:PSEEN0659 lipoprotein
YP_001666870.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN0660 methyltransferase
YP_001666871.1	KEGG: pen:PSEEN0661 hypothetical protein
YP_001666872.1	PFAM: MaoC domain protein dehydratase; KEGG: pen:PSEEN0662 hypothetical protein
YP_001666873.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001666874.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001666875.1	PFAM: AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN0665 transcriptional regulator, AraC family
YP_001666876.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN0666 methyl-accepting chemotaxis transducer
YP_001666877.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN0668 transcription regulator heavy metal-dependent MerE family
YP_001666878.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: pen:PSEEN0669 copper-translocating P-type ATPase
YP_001666879.1	KEGG: pen:PSEEN0670 hypothetical protein
YP_001666880.1	PFAM: Heavy metal transport/detoxification protein; KEGG: pen:PSEEN0671 copper-binding protein
YP_001666881.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0672 multidrug resistance transporter, Bcr/CflA family
YP_001666882.1	SMART: regulatory protein ArsR; KEGG: pen:PSEEN0673 transcriptional regulator, ArsR family
YP_001666883.1	catalyzes the formation of inosine from adenosine
YP_001666884.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN0676 oxidoreductase, short chain dehydrogenase/reductase family
YP_001666885.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: pen:PSEEN0678 hypothetical protein
YP_001666886.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: pen:PSEEN0679 transcriptional regulator, TetR/AcrR family
YP_001666887.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0680 transcriptional regulator, LysR family
YP_001666888.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_001666889.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN0682 methylmalonate-semialdehyde dehydrogenase
YP_001666890.1	PFAM: Paraquat-inducible protein A; KEGG: pen:PSEEN4698 paraquat-inducible protein A
YP_001666891.1	PFAM: Paraquat-inducible protein A; KEGG: pen:PSEEN4697 paraquat-inducible protein A
YP_001666892.1	PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN4696 paraquat-inducible protein B
YP_001666893.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_001666894.1	TIGRFAM: integral membrane protein MviN; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: pen:PSEEN4694 virulence factor MviN family
YP_001666895.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
YP_001666896.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_001666897.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001666898.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN4690 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)
YP_001666899.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_001666900.1	KEGG: pen:PSEEN4688 type IV pili biogenesis protein FimT
YP_001666901.1	KEGG: pen:PSEEN4687 hypothetical protein
YP_001666902.1	KEGG: pen:PSEEN4686 hypothetical protein
YP_001666903.1	KEGG: pen:PSEEN4685 hypothetical protein
YP_001666904.1	KEGG: pen:PSEEN4684 type IV pili biogenesis protein PilE
YP_001666905.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN4683 oxidoreductase, FAD-binding
YP_001666906.1	PFAM: Amidase; KEGG: pfl:PFL_3680 hypothetical protein
YP_001666907.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_001666908.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_3678 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001666909.1	PFAM: ABC transporter related; KEGG: pfl:PFL_3677 branched-chain amino acid ABC transporter, ATP binding protein
YP_001666910.1	PFAM: inner-membrane translocator; KEGG: pfl:PFL_3676 branched-chain amino acid ABC transporter, permease protein
YP_001666911.1	PFAM: inner-membrane translocator; KEGG: pfl:PFL_3675 branched-chain amino acid ABC transporter, permease protein
YP_001666912.1	KEGG: pfl:PFL_3674 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001666913.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pfl:PFL_3673 transcriptional regulator, GntR family
YP_001666914.1	KEGG: pen:PSEEN4682 hypothetical protein
YP_001666915.1	KEGG: pen:PSEEN4681 competence lipoprotein ComL
YP_001666916.1	KEGG: pen:PSEEN4680 23S rRNA pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001666917.1	PFAM: protein of unknown function DUF152; KEGG: pen:PSEEN4679 hypothetical protein
YP_001666918.1	KEGG: pen:PSEEN4678 ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001666919.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN4675 NADH dehydrogenase II
YP_001666920.1	KEGG: pen:PSEEN4674 hypothetical protein
YP_001666921.1	PFAM: Protein of unknown function DUF1780; KEGG: pen:PSEEN4673 hypothetical protein
YP_001666922.1	KEGG: pen:PSEEN4671 hypothetical protein
YP_001666923.1	PFAM: protein of unknown function DUF329; KEGG: pen:PSEEN4670 hypothetical protein
YP_001666924.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_001666925.1	PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: pen:PSEEN4668 type IV pili prepilin peptidase PilD/XcpA
YP_001666926.1	PFAM: Fimbrial protein pilin; KEGG: pen:PSEEN4666 type IV pili prepilin PilA
YP_001666927.1	PFAM: integrase family protein; KEGG: psa:PST_0259 site-specific recombinase, phage integrase family
YP_001666929.1	PFAM: Prophage CP4-57 regulatory; KEGG: sbo:SBO_4169 hypothetical protein
YP_001666930.1	KEGG: tbd:Tbd_0930 hypothetical protein
YP_001666932.1	KEGG: sbl:Sbal_4432 phage integrase family protein
YP_001666933.1	KEGG: fal:FRAAL5314 putative transmembrane efflux protein
YP_001666936.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pfl:PFL_2529 RNA polymerase sigma-70 factor, ECF subfamily
YP_001666937.1	PFAM: FecR protein; KEGG: pfl:PFL_2528 sigma factor regulatory protein PupR
YP_001666938.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfl:PFL_2527 outer membrane ferripyoverdine receptor
YP_001666939.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfl:PFL_2391 outer membrane ferripyoverdine receptor
YP_001666940.1	PFAM: FecR protein; KEGG: pfl:PFL_0146 sigma factor regulatory protein, FecR/PupR family
YP_001666941.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pfl:PFL_0145 RNA polymerase sigma-70 factor, ECF subfamily
YP_001666942.1	TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: pfo:Pfl_2796 gluconate transporter
YP_001666943.1	Catalyzes the reversible oxidation of malate to oxaloacetate
YP_001666945.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dar:Daro_1832 sigma-70 region 2
YP_001666946.1	PFAM: FecR protein; KEGG: pen:PSEEN0275 FecR-like transmembrane sensor
YP_001666947.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN3225 TonB-dependent siderophore receptor FpvA
YP_001666948.1	PFAM: Bile acid:sodium symporter; KEGG: pen:PSEEN4637 transporter, bile acid/Na+ symporter family
YP_001666949.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001666950.1	KEGG: pen:PSEEN0807 sensory box protein(GGDEF domain/EAL domain); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001666951.1	KEGG: pen:PSEEN0809 hypothetical protein
YP_001666952.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_001666953.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
YP_001666954.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: pen:PSEEN0813 transcription elongation factor
YP_001666955.1	KEGG: pen:PSEEN0814 lipoprotein
YP_001666956.1	KEGG: pen:PSEEN0815 hypothetical protein
YP_001666957.1	KEGG: pen:PSEEN0816 hypothetical protein
YP_001666958.1	PFAM: peptidase S16 lon domain protein; KEGG: pen:PSEEN0817 ATP-dependent protease
YP_001666959.1	KEGG: pen:PSEEN0818 hypothetical protein
YP_001666960.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0819 hypothetical protein
YP_001666961.1	KEGG: pen:PSEEN0820 hypothetical protein
YP_001666962.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN0821 FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase)
YP_001666963.1	KEGG: pen:PSEEN0822 hypothetical protein
YP_001666964.1	TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: pen:PSEEN0823 alkylphosphonate utilization operon protein PhnA
YP_001666965.1	PFAM: Polyprenyl synthetase; KEGG: pen:PSEEN0824 octaprenyl-diphosphate synthase
YP_001666966.1	PFAM: ribosomal protein L21; KEGG: pen:PSEEN0825 50S ribosomal subunit protein L21
YP_001666967.1	involved in the peptidyltransferase reaction during translation
YP_001666968.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_001666969.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_001666970.1	PFAM: CreA family protein; KEGG: pfo:Pfl_4856 CreA
YP_001666971.1	KEGG: pen:PSEEN0831 hypothetical protein
YP_001666972.1	KEGG: pen:PSEEN0832 hypothetical protein
YP_001666973.1	KEGG: pen:PSEEN0833 hypothetical protein
YP_001666974.1	KEGG: pen:PSEEN0834 hypothetical protein
YP_001666975.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0835 ribosomal-protein-alanine acetyltransferase RimI
YP_001666976.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: acb:A1S_1248 hypothetical protein
YP_001666977.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0838 transcriptional regulator, LysR family
YP_001666978.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN0839 transporter, LysE family
YP_001666980.1	PFAM: FecR protein; KEGG: pen:PSEEN0840 FecR-like transmembrane sensor
YP_001666981.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0841 fosmidomycin/multidrug transport protein (MFS superfamily)
YP_001666982.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0842 major facilitator family transporter
YP_001666983.1	PFAM: FecR protein; KEGG: pau:PA14_32720 probable transmembrane sensor
YP_001666984.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: neu:NE2486 sigma factor, ECF subfamily
YP_001666985.1	PFAM: HhH-GPD family protein; KEGG: pen:PSEEN0843 DNA-3-methyladenine glycosylase
YP_001666986.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pen:PSEEN0845 O6-methylguanine-DNA methyltransferase
YP_001666987.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pen:PSEEN0846 ion mechanosensitive channel
YP_001666988.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN0848 betaine-aldehyde dehydrogenase
YP_001666989.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN0849 transporter, NCS1 nucleoside transporter family
YP_001666990.1	KEGG: pen:PSEEN0850 hypothetical protein
YP_001666991.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_5893 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001666992.1	PFAM: FecR protein; KEGG: dac:Daci_3275 anti-FecI sigma factor, FecR
YP_001666993.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: rso:RSc2920 putative hydroxamate-type ferrisiderophore receptor signal peptide protein
YP_001666994.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: pen:PSEEN2685 cation transporter, CorA family
YP_001666995.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN0851 hydrolase; isochorismatase hydrolase family
YP_001666996.1	PFAM: protein of unknown function DUF344; KEGG: pen:PSEEN2681 hypothetical protein
YP_001666997.1	TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; KEGG: pfo:Pfl_3513 potassium efflux system protein
YP_001666998.1	PFAM: protein of unknown function UPF0118; KEGG: reh:H16_A2418 predicted permease
YP_001666999.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reh:H16_A2417 outer membrane heavy metal efflux protein
YP_001667000.1	PFAM: secretion protein HlyD family protein; KEGG: reu:Reut_A1739 secretion protein HlyD
YP_001667001.1	KEGG: reh:H16_A2415 predicted membrane protein
YP_001667002.1	TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: reu:Reut_A0690 sulphate anion transporter
YP_001667003.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: psb:Psyr_2580 sigma-70 region 2
YP_001667004.1	PFAM: FecR protein; KEGG: mms:mma_2029 Fe2+-dicitrate sensor, membrane component
YP_001667005.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: psp:PSPPH_1927 Ton-B dependent siderophore receptor, putative
YP_001667006.1	KEGG: psa:PST_3446 hypothetical protein
YP_001667007.1	KEGG: psa:PST_3445 hypothetical protein
YP_001667008.1	KEGG: yli:YALI0F03366g hypothetical protein
YP_001667009.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_001667010.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_001667011.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_001667012.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_001667013.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_001667014.1	Incorporates lipoproteins in the outer membrane after they are released by the LolA protein
YP_001667015.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN0860 hypothetical protein
YP_001667017.1	KEGG: psp:PSPPH_1886 hypothetical protein
YP_001667018.1	TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: psp:PSPPH_1885 hypothetical protein
YP_001667019.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_001667020.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_001667021.1	TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN0877 methylase of polypeptide chain release factors
YP_001667022.1	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
YP_001667023.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_001667024.1	KEGG: pfl:PFL_5155 hypothetical protein
YP_001667025.1	KEGG: pen:PSEEN0880 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001667026.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: pen:PSEEN0881 deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding
YP_001667027.1	PFAM: regulatory protein MerR; KEGG: pen:PSEEN0882 transcriptional regulator, MerR family
YP_001667028.1	PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: pen:PSEEN0883 hypothetical protein
YP_001667029.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN0884 hypothetical protein
YP_001667030.1	PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: pen:PSEEN0885 hypothetical protein
YP_001667031.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_001667032.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN0887 uracil permease
YP_001667033.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_001667034.1	Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively
YP_001667035.1	KEGG: pen:PSEEN0890 hypothetical protein
YP_001667036.1	KEGG: pen:PSEEN0891 hypothetical protein
YP_001667037.1	KEGG: pen:PSEEN0892 hypothetical protein
YP_001667038.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_001667039.1	KEGG: pen:PSEEN0894 hypothetical protein
YP_001667040.1	KEGG: pen:PSEEN0895 lipoprotein
YP_001667041.1	KEGG: pen:PSEEN0896 hypothetical protein
YP_001667042.1	KEGG: pen:PSEEN0897 hypothetical protein
YP_001667043.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pen:PSEEN0898 hypothetical protein
YP_001667044.1	KEGG: pen:PSEEN0900 hypothetical protein
YP_001667045.1	KEGG: pen:PSEEN0901 hypothetical protein
YP_001667046.1	PFAM: protein of unknown function DUF159; KEGG: pen:PSEEN0902 hypothetical protein
YP_001667047.1	PFAM: peptidase M48 Ste24p; KEGG: pen:PSEEN0904 zinc-dependent peptidase, M48 family
YP_001667048.1	PFAM: protein of unknown function UPF0016; KEGG: pen:PSEEN0905 hypothetical protein
YP_001667049.1	PFAM: methyltransferase small; Methyltransferase small domain protein; KEGG: pen:PSEEN0906 ribosomal RNA small subunit methyltransferase C
YP_001667050.1	Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor
YP_001667051.1	activates fatty acids by binding to coenzyme A
YP_001667052.1	PFAM: protein of unknown function DUF1302; KEGG: pen:PSEEN0909 hypothetical protein
YP_001667053.1	PFAM: protein of unknown function DUF1329; KEGG: pen:PSEEN0910 hypothetical protein
YP_001667054.1	PFAM: regulatory protein LuxR; KEGG: pen:PSEEN0911 transcriptional regulator, LuxR family
YP_001667055.1	PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN0912 response regulator/TPR domain protein
YP_001667056.1	PFAM: ATP-binding region ATPase domain protein; KEGG: pen:PSEEN0913 sensor histidine kinase
YP_001667057.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN0914 hydrolase; metallo-beta-lactamase family protein
YP_001667058.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN0915 outer membrane protein, OmpA family
YP_001667059.1	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate
YP_001667060.1	KEGG: pfl:PFL_0939 hypothetical protein
YP_001667061.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN0918 peptidyl-prolyl cis-trans isomerase SlyD (FKBP-type)
YP_001667062.1	PFAM: glutathione peroxidase; KEGG: pen:PSEEN0919 glutathione peroxidase
YP_001667063.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN0921 glycosyl transferase, group 1
YP_001667064.1	KEGG: pen:PSEEN0922 methyl-accepting chemotaxis transducer/sensory box protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein
YP_001667065.1	putative role in sulfur assimilation
YP_001667066.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN0924 thioredoxin reductase
YP_001667067.1	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide
YP_001667068.1	PFAM: protein of unknown function DUF1631; KEGG: pen:PSEEN0926 hypothetical protein
YP_001667069.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: pen:PSEEN0927 N-acetyl-anhydromuramyl-L-alanine amidase
YP_001667070.1	KEGG: pen:PSEEN0928 inner membrane protein AmpE
YP_001667071.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: pen:PSEEN0930 deoxyribonuclease, TatD family (metal-dependent)
YP_001667072.1	binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism
YP_001667073.1	TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: pen:PSEEN0932 phosphotransferase system FruB, fructose-specific EI/HPr/EIIA components
YP_001667074.1	KEGG: pen:PSEEN0933 1-phosphofructokinase FruK; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein
YP_001667075.1	TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS fructose-specific IIB subunit; KEGG: pen:PSEEN0934 phosphotransferase system FruA, fructose-specific IIBC component
YP_001667076.1	KEGG: pen:PSEEN0935 hypothetical protein
YP_001667077.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0936 hypothetical protein
YP_001667078.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN0937 hypothetical protein
YP_001667079.1	PFAM: outer membrane porin; KEGG: pen:PSEEN0940 porin OprD family
YP_001667080.1	KEGG: pen:PSEEN0941 hypothetical protein
YP_001667081.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN0942 heavy metal sensor histidine kinase
YP_001667082.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN0943 DNA-binding heavy metal response regulator
YP_001667083.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN0944 multidrug transport protein; acriflavin resistance protein family
YP_001667084.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN0945 multidrug RND transporter, membrane fusion protein (HylD family)
YP_001667085.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN0947 hypothetical protein
YP_001667086.1	KEGG: pen:PSEEN0948 hypothetical protein
YP_001667087.1	PFAM: response regulator receiver; CheW domain protein; KEGG: pen:PSEEN0950 chemotaxis signal transduction protein CheW-like
YP_001667088.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: stt:t2646 putative type I secretion protein
YP_001667089.1	KEGG: aeh:Mlg_2167 ABC transporter related; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001667090.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: ses:SARI_00237 hypothetical protein
YP_001667091.1	KEGG: par:Psyc_1601 hypothetical protein
YP_001667092.1	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon
YP_001667093.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
YP_001667094.1	disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein
YP_001667095.1	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: pen:PSEEN0956 cytochrome o ubiquinol oxidase subunit II
YP_001667096.1	KEGG: pen:PSEEN0957 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001667097.1	TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: pen:PSEEN0958 cytochrome o ubiquinol oxidase subunit III
YP_001667098.1	TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: pen:PSEEN0959 cytochrome o ubiquinol oxidase, subunit IV
YP_001667099.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_001667100.1	PFAM: aminotransferase class I and II; KEGG: pen:PSEEN0965 aminotransferase (transaminase)
YP_001667101.1	KEGG: pen:PSEEN0961 hypothetical protein
YP_001667102.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN0966 hypothetical protein
YP_001667103.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0985 acetyltransferase, GNAT family
YP_001667104.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: neu:NE1096 sigma factor, ECF subfamily
YP_001667105.1	PFAM: FecR protein; KEGG: neu:NE1095 putative transmembrane sensor
YP_001667106.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: nwi:Nwi_1732 TonB-dependent siderophore receptor
YP_001667107.1	KEGG: pen:PSEEN0987 hypothetical protein
YP_001667108.1	PFAM: protein of unknown function DUF1311; KEGG: pen:PSEEN0989 hypothetical protein
YP_001667109.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
YP_001667110.1	catalyzes the formation of selenophosphate from selenide and ATP
YP_001667111.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: pen:PSEEN0992 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_001667112.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0993 phosphonate ABC transporter, ATP-binding protein
YP_001667113.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0994 phosphonate ABC transporter, permease protein
YP_001667114.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0995 phosphonate ABC transporter, permease protein
YP_001667115.1	PFAM: protein of unknown function UPF0187; KEGG: pen:PSEEN0996 hypothetical protein
YP_001667116.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0998 acetyltransferase, GNAT family
YP_001667117.1	KEGG: ppr:PBPRA0472 hypothetical protein
YP_001667118.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_3268 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001667119.1	PFAM: FecR protein; KEGG: mms:mma_3496 Fe2+-dicitrate sensor, membrane component
YP_001667120.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: dac:Daci_3273 TonB-dependent siderophore receptor
YP_001667121.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_001667122.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_001667123.1	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex
YP_001667124.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_001667125.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_001667126.1	PFAM: 17 kDa surface antigen; KEGG: pen:PSEEN1004 hypothetical protein
YP_001667127.1	PFAM: inositol monophosphatase; KEGG: pen:PSEEN1005 inositol-1-monophosphatase (IMPase) (inositol-1-phosphatase) (I-1-Pase)
YP_001667128.1	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pen:PSEEN1006 tRNA/rRNA methyltransferase, TrmH family, group 1
YP_001667129.1	TIGRFAM: serine O-acetyltransferase; KEGG: pen:PSEEN1007 serine O-acetyltransferase
YP_001667130.1	TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: pen:PSEEN1009 iron-sulfur cluster assembly transcription factor IscR
YP_001667131.1	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis
YP_001667132.1	TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: pfl:PFL_4964 FeS cluster assembly scaffold IscU
YP_001667133.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: pen:PSEEN1012 iron-sulfur cluster assembly protein IscA
YP_001667134.1	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
YP_001667135.1	involved in the maturation of iron-sulfur cluster-containing proteins
YP_001667136.1	TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: pen:PSEEN1015 ferredoxin, 2Fe-2S type, ISC system
YP_001667137.1	TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: pen:PSEEN1016 hypothetical protein
YP_001667138.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_001667139.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: pen:PSEEN1018 radical SAM enzyme, Cfr family
YP_001667140.1	KEGG: pen:PSEEN1019 type IV pili biogenesis protein PilF; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001667141.1	SMART: helix-turn-helix domain protein; KEGG: pen:PSEEN1020 transcriptional regulator
YP_001667142.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_001667143.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_001667144.1	KEGG: pen:PSEEN1023 hypothetical protein
YP_001667145.1	TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: pen:PSEEN1024 hypothetical protein
YP_001667146.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_001667147.1	catalyzes the transfer of an amino moiety
YP_001667148.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN1027 hydrolase, carbon-nitrogen hydrolase family
YP_001667149.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; KEGG: pen:PSEEN1028 sulfite reductase flavoprotein alpha-component; iron-regulated membrane protein
YP_001667150.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN1029 TonB-dependent siderophore receptor
YP_001667151.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: pen:PSEEN1031 PKHD-type hydroxylase; iron-uptake factor
YP_001667152.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN1032 hypothetical protein
YP_001667153.1	KEGG: pen:PSEEN1033 hypothetical protein
YP_001667154.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pen:PSEEN1035 ornithine decarboxylase
YP_001667155.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN1037 RNA polymerase sigma-70 factor, ECF family
YP_001667156.1	PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor
YP_001667157.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN1039 FecA-like outer membrane receptor
YP_001667158.1	KEGG: pen:PSEEN1040 glycine betaine/carnitine/choline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase
YP_001667159.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1041 glycine betaine/carnitine/choline ABC transporter, permease protein
YP_001667160.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN1042 glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein
YP_001667161.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1043 glycine betaine/carnitine/choline ABC transporter, permease protein
YP_001667162.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
YP_001667163.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN1048 periplasmic polyamine-binding protein
YP_001667164.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: pen:PSEEN1049 hypothetical protein
YP_001667165.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN1050 FAD dependent oxidoreductase
YP_001667166.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN1051 transcriptional regulator, AraC family
YP_001667167.1	Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides
YP_001667168.1	KEGG: pen:PSEEN1054 dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001667169.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1055 dipeptide ABC transporter, permease protein
YP_001667170.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1056 dipeptide ABC transporter, permease protein
YP_001667171.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN1057 dipeptide ABC transporter, periplasmic dipeptide-binding protein
YP_001667172.1	PFAM: outer membrane porin; KEGG: pen:PSEEN1058 porin, OprD family
YP_001667173.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN1059 dipeptide ABC transporter, periplasmic peptide-binding protein
YP_001667174.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN1060 dipeptide ABC transporter, periplasmic peptide-binding protein
YP_001667175.1	PFAM: protein of unknown function DUF541; KEGG: pen:PSEEN1061 hypothetical protein
YP_001667176.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1062 sensor histidine kinase
YP_001667177.1	PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: pen:PSEEN1063 response regulator, RegA/PrrA/ActR type
YP_001667178.1	PFAM: Auxin Efflux Carrier; KEGG: pen:PSEEN1066 hypothetical protein
YP_001667179.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN1067 aromatic amino acid transporter, APC family
YP_001667180.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: pen:PSEEN1068 4-carboxymuconolactone decarboxylase PcaC
YP_001667181.1	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: pen:PSEEN1069 K+-dependent Na+/Ca+ antiporter
YP_001667182.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pen:PSEEN1070 lipoprotein, RplA family
YP_001667183.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_001667184.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_001667185.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
YP_001667186.1	functions in MreBCD complex in some organisms
YP_001667187.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_001667188.1	TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: pen:PSEEN1076 rod shape-determining protein MreD
YP_001667189.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_001667190.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: pen:PSEEN1078 ibonuclease G
YP_001667191.1	KEGG: pen:PSEEN1079 hypothetical protein
YP_001667192.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN1080 hydrolase, carbon-nitrogen hydrolase family
YP_001667193.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: pen:PSEEN1081 peptidase U62 TldD
YP_001667194.1	PFAM: protein of unknown function DUF615; KEGG: pen:PSEEN1082 hypothetical protein
YP_001667195.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: pen:PSEEN1083 peptidase U62 TldE
YP_001667196.1	KEGG: pen:PSEEN1084 hypothetical protein
YP_001667197.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_001667198.1	KEGG: pen:PSEEN1086 hypothetical protein
YP_001667199.1	PFAM: manganese and iron superoxide dismutase; KEGG: pen:PSEEN1087 superoxide dismutase
YP_001667200.1	PFAM: zinc/iron permease; KEGG: pen:PSEEN1088 hypothetical protein
YP_001667201.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: pen:PSEEN1089 phosphocarrier protein (HPr-like) NPr
YP_001667202.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN1090 uncharacterized ATPase
YP_001667203.1	TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: pen:PSEEN1091 phosphotransferase system, nitrogen regulatory IIA protein
YP_001667204.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: pen:PSEEN1092 sigma N (sigma 54) modulator RpoX
YP_001667205.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
YP_001667206.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1094 ABC transporter, ATP-binding protein
YP_001667207.1	TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: pen:PSEEN1095 hypothetical protein
YP_001667208.1	PFAM: protein of unknown function DUF1239; KEGG: pen:PSEEN1096 hypothetical protein
YP_001667209.1	TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: pen:PSEEN1097 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
YP_001667210.1	KEGG: pen:PSEEN1098 hypothetical protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_001667211.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1099 toluene tolerance ABC efflux transporter, ATP-binding protein
YP_001667212.1	PFAM: protein of unknown function DUF140; KEGG: pen:PSEEN1100 toluene tolerance ABC efflux transporter, permease
YP_001667213.1	PFAM: Mammalian cell entry related domain protein; KEGG: pen:PSEEN1101 toluene tolerance ABC transporter, periplasmic substrate-binding protein
YP_001667214.1	PFAM: toluene tolerance family protein; KEGG: pen:PSEEN1102 toluene tolerance protein Ttg2D
YP_001667215.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pen:PSEEN1103 toluene-tolerance protein TtgE
YP_001667216.1	PFAM: BolA family protein; KEGG: pen:PSEEN1104 toluene-tolerance protein Ttg2F
YP_001667217.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_001667218.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
YP_001667219.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_001667220.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_001667221.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: hch:HCH_03222 protein containing hemopexin repeats
YP_001667222.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN4453 transcriptional regulator, GntR family
YP_001667223.1	TIGRFAM: cyanate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4452 cyanate MFS transporter
YP_001667224.1	KEGG: pen:PSEEN4451 hypothetical protein
YP_001667225.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: pen:PSEEN4450 endonuclease
YP_001667226.1	PFAM: 37kDa nucleoid-associated protein; KEGG: pen:PSEEN4449 nucleoid-associated protein
YP_001667227.1	PFAM: histone family protein DNA-binding protein; KEGG: pen:PSEEN4448 DNA-binding protein HU form N
YP_001667228.1	PFAM: protein of unknown function DUF890; KEGG: pen:PSEEN4447 hypothetical protein
YP_001667229.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_001667230.1	KEGG: pen:PSEEN4445 hypothetical protein
YP_001667231.1	binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
YP_001667232.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_001667233.1	PFAM: permease YjgP/YjgQ family protein; KEGG: pen:PSEEN4442 hypothetical protein
YP_001667234.1	PFAM: permease YjgP/YjgQ family protein; KEGG: pen:PSEEN4441 hypothetical protein
YP_001667235.1	PFAM: RDD domain containing protein; KEGG: pen:PSEEN4440 hypothetical protein
YP_001667236.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pen:PSEEN4439 cold shock protein
YP_001667237.1	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: pen:PSEEN4438 glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent
YP_001667238.1	KEGG: pen:PSEEN4437 L-serine deaminase I; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_001667239.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_001667240.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_001667241.1	PFAM: sodium/glutamate symporter; KEGG: cvi:CV_1105 sodium/glutamate symport carrier protein
YP_001667242.1	PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: pen:PSEEN4432 sigma-54 dependent transcriptional regulator
YP_001667243.1	KEGG: pen:PSEEN4431 hypothetical protein
YP_001667244.1	reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP
YP_001667245.1	catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway
YP_001667246.1	catalyzes the degradation of arginine to citruline and ammonia
YP_001667247.1	TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: pen:PSEEN4427 arginine/ornithine antiporter
YP_001667248.1	TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: pen:PSEEN4426 arginine/ornithine antiporter
YP_001667249.1	PFAM: protein of unknown function DUF454; KEGG: pen:PSEEN4424 hypothetical protein
YP_001667250.1	PFAM: Haem oxygenase; KEGG: pen:PSEEN4423 heme oxygenase
YP_001667251.1	TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN4422 TonB-dependent outer membrane heme receptor
YP_001667252.1	PFAM: FecR protein; KEGG: pen:PSEEN4421 FecR-like transmembrane sensor
YP_001667253.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN4420 RNA polymerase sigma-70 factor, ECF subfamily
YP_001667254.1	KEGG: pen:PSEEN4418 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001667255.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_001667256.1	catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate
YP_001667257.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN4415 two-component response regulator GltR
YP_001667258.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN4414 sensor histidine kinase
YP_001667259.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN4412 glucose ABC transporter, periplasmic sugar-binding protein
YP_001667260.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN4411 glucose ABC transporter, permease protein
YP_001667261.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN4410 glucose ABC transporter, permease protein
YP_001667262.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN4409 glucose ABC transporter, ATP-binding subunit
YP_001667263.1	PFAM: Carbohydrate-selective porin OprB; KEGG: pen:PSEEN4408 glucose-selective porin OprB
YP_001667264.1	PFAM: Aldose 1-epimerase; KEGG: pen:PSEEN4407 hypothetical protein
YP_001667265.1	Represses the expression of the zwf, eda, glp and gap
YP_001667266.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001667267.1	TIGRFAM: 6-phosphogluconolactonase; KEGG: pen:PSEEN4404 6-phosphogluconolactonase
YP_001667268.1	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate
YP_001667269.1	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: pen:PSEEN4399 2-isopropylmalate synthase
YP_001667270.1	PFAM: peptidase M23B; KEGG: pen:PSEEN4398 peptidase, M23/M37 family
YP_001667271.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_001667272.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4396 transcriptional regulator, LysR family
YP_001667273.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN4395 hypothetical protein
YP_001667274.1	KEGG: pen:PSEEN4394 hypothetical protein
YP_001667275.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_001667276.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_001667277.1	PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pen:PSEEN4390 Mn2+ multicopper oxidase CumA
YP_001667278.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pen:PSEEN4389 cytidine/deoxycytidylate deaminase
YP_001667279.1	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function
YP_001667280.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_001667281.1	KEGG: pen:PSEEN4385 hypothetical protein
YP_001667282.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: pmy:Pmen_0516 sec-independent protein translocase, TatC subunit
YP_001667283.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: pen:PSEEN5079 twin-arginin translocase subunit B
YP_001667284.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: pen:PSEEN4376 twin-arginine translocation protein TatA
YP_001667285.1	PFAM: General secretion pathway protein K; KEGG: pen:PSEEN4375 type II secretion system protein K (XcpX)
YP_001667286.1	PFAM: protein of unknown function DUF839; KEGG: pen:PSEEN4284 hypothetical protein
YP_001667287.1	KEGG: pen:PSEEN4283 lipoprotein UxpA
YP_001667288.1	KEGG: pen:PSEEN4282 type II secretion protein C
YP_001667289.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: pen:PSEEN4281 type II secretion system protein D
YP_001667290.1	PFAM: type II secretion system protein E; KEGG: pen:PSEEN4280 type II secretion system protein E
YP_001667291.1	TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: pen:PSEEN4279 type II secretion system protein F
YP_001667292.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: pen:PSEEN4278 type II secretion system protein G
YP_001667293.1	TIGRFAM: general secretion pathway protein H; KEGG: pen:PSEEN4277 type II secretion system protein H
YP_001667294.1	PFAM: type II secretion system protein I/J; KEGG: pen:PSEEN4276 type II secretion system protein I
YP_001667295.1	KEGG: pen:PSEEN4275 type II secretion system protein J
YP_001667296.1	TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: pen:PSEEN4274 type II secretion pathway protein L
YP_001667297.1	KEGG: pen:PSEEN4273 type II secretion system protein M
YP_001667298.1	PFAM: type II secretion system protein N; KEGG: pen:PSEEN4272 type II secretion system protein N
YP_001667299.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: pap:PSPA7_4642 hemolysin
YP_001667300.1	KEGG: pen:PSEEN4271 hypothetical protein
YP_001667301.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN4270 hydrolase, MutT/NUDIX family protein
YP_001667302.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN4269 hydrolase, MutT/NUDIX family protein
YP_001667303.1	KEGG: pen:PSEEN4268 transferase family protein
YP_001667304.1	PFAM: protein of unknown function DUF1289; KEGG: pen:PSEEN4267 hypothetical protein
YP_001667305.1	KEGG: pen:PSEEN4266 hypothetical protein
YP_001667306.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
YP_001667307.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN4264 citrate-proton symporter (MFS superfamily)
YP_001667308.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: pen:PSEEN4263 hypothetical protein
YP_001667309.1	PFAM: cytochrome c assembly protein; KEGG: pen:PSEEN4262 cytochrome c assembly protein
YP_001667310.1	KEGG: pen:PSEEN4261 4.5S-RNP protein, GTP binding export factor, part of signal recognition particle with 4.5 RNA; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001667311.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_001667312.1	Essential for efficient processing of 16S rRNA
YP_001667313.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_001667314.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_001667315.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN4256 long-chain acyl-CoA thioester hydrolase
YP_001667316.1	PFAM: sodium/hydrogen exchanger; KEGG: pen:PSEEN4255 sodium/hydrogen exchanger family protein
YP_001667317.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_001667318.1	KEGG: pen:PSEEN4253 thiol:disulfide interchange protein DsbC
YP_001667319.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_001667320.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_001667321.1	KEGG: pen:PSEEN4249 hypothetical protein
YP_001667322.1	KEGG: pen:PSEEN4248 hypothetical protein
YP_001667323.1	KEGG: pen:PSEEN4247 hypothetical protein
YP_001667324.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pen:PSEEN4246 CaiB/BaiF family protein
YP_001667325.1	PFAM: YaeQ family protein; KEGG: pen:PSEEN4245 hypothetical protein
YP_001667326.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: pen:PSEEN4244 ssDNA specific exonuclease RecJ
YP_001667328.1	KEGG: bte:BTH_II1428 hypothetical protein
YP_001667329.1	KEGG: pen:PSEEN1423 hypothetical protein
YP_001667330.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pen:PSEEN1235 oxidireductase
YP_001667331.1	catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation
YP_001667332.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1239 ABC transporter, permease protein
YP_001667333.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1240 ABC transporter, permease protein
YP_001667334.1	KEGG: pen:PSEEN1241 ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001667335.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN1242 ABC transporter, periplasmic polyamine-binding protein
YP_001667336.1	PFAM: protein of unknown function DUF533; KEGG: pen:PSEEN1243 hypothetical protein
YP_001667337.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1245 methyl-accepting chemotaxis transducer
YP_001667338.1	PFAM: CheW domain protein; KEGG: pen:PSEEN1246 chemotaxis signal transduction protein; CheW domain protein
YP_001667339.1	PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: pen:PSEEN1247 methyltransferase, CheR-like
YP_001667340.1	PFAM: CheW domain protein; KEGG: pen:PSEEN1248 chemotaxis signal transduction protein; CheW domain protein
YP_001667341.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: pen:PSEEN1249 sensor histidine kinase/response regulator hybrid
YP_001667342.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_001667343.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: pen:PSEEN1251 response regulator/GGDEF domain protein
YP_001667344.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: pen:PSEEN1254 peptide chain release factor 2
YP_001667345.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_001667346.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN1256 transcriptional regulator, TetR family
YP_001667347.1	KEGG: pen:PSEEN1257 lipoprotein
YP_001667348.1	PFAM: protein of unknown function DUF1704; KEGG: pen:PSEEN1258 hypothetical protein
YP_001667349.1	KEGG: pen:PSEEN1259 lipoprotein
YP_001667350.1	KEGG: pen:PSEEN1260 hypothetical protein
YP_001667351.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1261 outer membrane protein; OmpA family
YP_001667352.1	KEGG: pen:PSEEN1262 hypothetical protein
YP_001667353.1	KEGG: pen:PSEEN1263 hypothetical protein
YP_001667354.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
YP_001667355.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_001667356.1	PFAM: peptidase M22 glycoprotease; KEGG: pen:PSEEN1266 glycoprotein endopeptidase metalloprotease
YP_001667357.1	KEGG: pen:PSEEN1267 hypothetical protein
YP_001667358.1	PFAM: protein of unknown function DUF72; KEGG: pen:PSEEN1268 hypothetical protein
YP_001667359.1	KEGG: pen:PSEEN1269 carboxyvinyl-carboxyphosphonate phosphorylmutase
YP_001667360.1	PFAM: Extensin family protein; KEGG: pst:PSPTO_1513 hypothetical protein
YP_001667361.1	KEGG: pen:PSEEN1270 hypothetical protein
YP_001667362.1	PFAM: protein of unknown function DUF548; KEGG: pen:PSEEN1271 hypothetical protein
YP_001667363.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN4243 transcriptional regulator, TetR family
YP_001667364.1	KEGG: pap:PSPA7_2933 hypothetical protein
YP_001667365.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: pau:PA14_34580 putative flavin reductase dependent enzyme
YP_001667366.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4241 multidrug RND transporter, membrane fusion protein
YP_001667367.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN4240 Acr-type multidrug efflux transporter (RND family)
YP_001667368.1	KEGG: pen:PSEEN4239 hypothetical protein
YP_001667369.1	KEGG: pen:PSEEN4238 lipoprotein
YP_001667370.1	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA
YP_001667371.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pen:PSEEN4235 cold shock protein CspE-like
YP_001667372.1	KEGG: pen:PSEEN4234 hypothetical protein
YP_001667373.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN4233 23S rRNA m1G745 methyltransferase RrmA
YP_001667374.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_001667375.1	KEGG: bch:Bcen2424_1753 protein of unknown function DUF1120
YP_001667376.1	PFAM: pili assembly chaperone; KEGG: spe:Spro_2407 pili assembly chaperone
YP_001667377.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_1679 fimbrial biogenesis outer membrane usher protein
YP_001667378.1	KEGG: bcn:Bcen_6326 protein of unknown function DUF1120
YP_001667379.1	PFAM: glycoside hydrolase family 17; glycosyl transferase family 2; KEGG: pen:PSEEN4231 glycosyl transferase
YP_001667380.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: pen:PSEEN4230 hypothetical protein
YP_001667381.1	PFAM: Fe-S metabolism associated SufE; KEGG: pen:PSEEN4229 hypothetical protein
YP_001667382.1	PFAM: aminotransferase class V; KEGG: pen:PSEEN4228 cysteine sulfinate desulfinase
YP_001667383.1	KEGG: pen:PSEEN4227 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD
YP_001667384.1	PFAM: arsenate reductase and related; KEGG: pen:PSEEN4226 hypothetical protein
YP_001667385.1	TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: pen:PSEEN4225 sodium:hydrogen antiporter (CPA1 family)
YP_001667386.1	PFAM: Calcium-binding EF-hand-containing protein
YP_001667387.1	catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate
YP_001667388.1	Catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_001667389.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_001667390.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_001667391.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_001667392.1	Catalyzes the phosphorylation of UMP to UDP
YP_001667393.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_001667394.1	KEGG: pen:PSEEN4216 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_001667395.1	PFAM: phosphatidate cytidylyltransferase; KEGG: pen:PSEEN4215 phosphatidate cytidylyltransferase
YP_001667396.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_001667397.1	TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: pen:PSEEN4213 membrane-associated Zn-dependent proteases 1
YP_001667398.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: pen:PSEEN4212 outer membrane protein, bacterial surface antigen family
YP_001667399.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: pen:PSEEN4211 outer membrane protein OmpH-like
YP_001667400.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_001667401.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_001667402.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_001667403.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_001667404.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_001667405.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_001667406.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_001667407.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: pen:PSEEN4203 cell cycle protein MesJ
YP_001667408.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_001667409.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_001667410.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_001667411.1	PFAM: Septum formation initiator; KEGG: pen:PSEEN4199 cell division protein FtsB-like
YP_001667412.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
YP_001667413.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4197 transcriptional regulator, LysR family
YP_001667414.1	TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN4196 alcohol dehydrogenase class III
YP_001667415.1	KEGG: pen:PSEEN4195 esterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase
YP_001667416.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
YP_001667417.1	catalyzes the modification of U13 in tRNA(Glu)
YP_001667418.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_001667419.1	catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins
YP_001667420.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: pen:PSEEN4190 peptidase M23B
YP_001667421.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses
YP_001667422.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pen:PSEEN4188 ferredoxin
YP_001667423.1	This protein performs the mismatch recognition step during the DNA repair process
YP_001667425.1	PFAM: integrase family protein; KEGG: esa:ESA_01608 hypothetical protein
YP_001667426.1	KEGG: bbr:BB3542 putative phage excisionase
YP_001667427.1	KEGG: rsq:Rsph17025_1730 hypothetical protein
YP_001667429.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: pap:PSPA7_2374 C-5 cytosine-specific DNA methylase
YP_001667431.1	KEGG: psb:Psyr_4605 transcriptional regulator PrtN, putative
YP_001667432.1	PFAM: peptidase S24 and S26 domain protein; KEGG: bvi:Bcep1808_1159 putative phage repressor
YP_001667433.1	KEGG: net:Neut_1483 hypothetical protein
YP_001667434.1	KEGG: pmy:Pmen_3981 hypothetical protein
YP_001667435.1	PFAM: Bifunctional DNA primase/polymerase; KEGG: hch:HCH_02881 hypothetical protein
YP_001667436.1	KEGG: psb:Psyr_4602 hypothetical protein
YP_001667437.1	KEGG: pen:PSEEN4184 pyocin R2_PP, holin
YP_001667438.1	KEGG: pfl:PFL_1992 hypothetical protein
YP_001667439.1	PFAM: terminase GpA; KEGG: pst:PSPTO_3412 terminase, large subunit
YP_001667440.1	KEGG: pst:PSPTO_3411 hypothetical protein
YP_001667441.1	TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: pst:PSPTO_3410 portal protein
YP_001667442.1	PFAM: peptidase S14 ClpP; KEGG: pst:PSPTO_3409 ATP-dependent Clp protease, proteolytic subunit ClpP
YP_001667443.1	KEGG: pfl:PFL_1997 hypothetical protein
YP_001667444.1	KEGG: pst:PSPTO_3407 hypothetical protein
YP_001667445.1	KEGG: pfl:PFL_1999 hypothetical protein
YP_001667446.1	KEGG: pfl:PFL_2000 hypothetical protein
YP_001667447.1	KEGG: pst:PSPTO_3404 hypothetical protein
YP_001667448.1	TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: pen:PSEEN4163 pyocin R2_PP, tail spike protein
YP_001667450.1	PFAM: GPW/gp25 family protein; KEGG: pen:PSEEN4162 pyocin R2_PP, baseplate protein
YP_001667451.1	PFAM: Baseplate J family protein; KEGG: pap:PSPA7_0762 hypothetical protein
YP_001667452.1	TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: cvi:CV_0423 probable phage tail protein
YP_001667453.1	KEGG: cvi:CV_2114 probable pyocin R2_PP, tail fiber protein
YP_001667455.1	KEGG: rso:RSc1920 putative tail fiber assembly-like protein
YP_001667456.1	PFAM: tail sheath protein; KEGG: pen:PSEEN4155 pyocin R2_PP, tail sheath protein gpFI
YP_001667457.1	TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pen:PSEEN4154 pyocin R2_PP, tail tube protein GpFII
YP_001667458.1	KEGG: pen:PSEEN4153 hypothetical protein
YP_001667459.1	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: pst:PSPTO_3393 tail tape meausure protein
YP_001667460.1	PFAM: P2 GpU family protein; KEGG: pfl:PFL_2014 pyocin R2_PP, tail formation protein
YP_001667461.1	PFAM: tail X family protein; KEGG: psp:PSPPH_1880 prophage PSPPH02, tail protein X
YP_001667462.1	PFAM: late control D family protein; KEGG: pfl:PFL_2017 tail protein D
YP_001667463.1	PFAM: glycoside hydrolase family 19; KEGG: pfl:PFL_2018 pyocin R2_PP, lytic enzyme
YP_001667464.1	KEGG: pfl:PFL_2019 phage protein, putative
YP_001667465.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: psp:PSPPH_1883 prophage PSPPH02, putative adenine modification methytransferase
YP_001667466.1	KEGG: pen:PSEEN3076 hypothetical protein
YP_001667467.1	KEGG: pen:PSEEN3022 hypothetical protein
YP_001667468.1	KEGG: pen:PSEEN1776 hypothetical protein
YP_001667472.1	KEGG: pfo:Pfl_1691 hypothetical protein
YP_001667473.1	PFAM: CinA domain protein; KEGG: pen:PSEEN4129 hypothetical protein
YP_001667474.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_001667475.1	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities
YP_001667476.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN4126 hypothetical protein
YP_001667477.1	KEGG: pen:PSEEN4125 hypothetical protein
YP_001667478.1	KEGG: pen:PSEEN4124 hypothetical protein
YP_001667479.1	PFAM: DTW domain containing protein; KEGG: pen:PSEEN4123 hypothetical protein
YP_001667480.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pen:PSEEN4122 DNA-binding response regulator, LuxR family
YP_001667481.1	PFAM: diacylglycerol kinase; KEGG: pen:PSEEN4121 diacylglycerol kinase
YP_001667482.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4120 transcriptional regulator, LysR family
YP_001667483.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN4119 ferredoxin--NADP+ reductase
YP_001667484.1	PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: pen:PSEEN1348 metallopeptidase, SprT family
YP_001667485.1	PFAM: protein of unknown function DUF1282; KEGG: pen:PSEEN1349 hypothetical protein
YP_001667486.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
YP_001667487.1	KEGG: pen:PSEEN1351 DNA-glycosylase
YP_001667488.1	KEGG: pen:PSEEN1352 hypothetical protein
YP_001667489.1	TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: pen:PSEEN1353 tryptophan repressor binding protein WrbA
YP_001667490.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: pen:PSEEN1354 arsenate reductase
YP_001667491.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN1355 thioredoxin
YP_001667492.1	PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pen:PSEEN1356 hypothetical protein
YP_001667493.1	KEGG: pen:PSEEN1357 hypothetical protein
YP_001667494.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pen:PSEEN1358 D-lactate dehydrogenase, NAD-dependent
YP_001667495.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: pen:PSEEN1359 GacS sensor kinase protein
YP_001667496.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN1360 DNA-binding response regulator
YP_001667497.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1361 sensor histidine kinase
YP_001667498.1	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide
YP_001667499.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
YP_001667500.1	KEGG: pen:PSEEN1364 GTP pyrophosphokinase RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein
YP_001667501.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era
YP_001667502.1	KEGG: pen:PSEEN1366 hypothetical protein
YP_001667503.1	KEGG: pen:PSEEN1367 hypothetical protein
YP_001667504.1	KEGG: pen:PSEEN1368 hypothetical protein
YP_001667505.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_001667506.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_001667507.1	KEGG: pen:PSEEN1371 hypothetical protein
YP_001667508.1	PFAM: protein of unknown function UPF0118; KEGG: pen:PSEEN1372 permease
YP_001667509.1	controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP
YP_001667510.1	PFAM: NLP/P60 protein; KEGG: pen:PSEEN1374 hypothetical protein
YP_001667511.1	PFAM: NLP/P60 protein; KEGG: pen:PSEEN1375 hypothetical protein
YP_001667512.1	KEGG: pen:PSEEN1376 hypothetical protein
YP_001667513.1	KEGG: pfo:Pfl_1639 L-sorbosone dehydrogenase
YP_001667514.1	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide
YP_001667515.1	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid
YP_001667516.1	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: pen:PSEEN1380 nitroreductase; cobalamine biosynthesis protein
YP_001667517.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
YP_001667518.1	cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase
YP_001667519.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_001667520.1	catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP
YP_001667521.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
YP_001667522.1	TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; KEGG: pen:PSEEN1386 alpha-ribazole-5'-phosphate phosphatase CobC
YP_001667523.1	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole
YP_001667524.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN1389 transcriptional regulator, MarR family
YP_001667525.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN1390 transporter
YP_001667526.1	KEGG: pen:PSEEN1391 hypothetical protein
YP_001667527.1	PFAM: glutathione peroxidase; Redoxin domain protein; KEGG: pen:PSEEN1392 glutathione peroxidase
YP_001667528.1	KEGG: pen:PSEEN1394 hypothetical protein
YP_001667529.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1395 transcriptional regulator, LysR family
YP_001667530.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: pen:PSEEN1396 long-chain fatty acid transporter
YP_001667531.1	KEGG: pen:PSEEN1397 hypothetical protein
YP_001667532.1	KEGG: pen:PSEEN1400 hypothetical protein
YP_001667533.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN1403 hypothetical protein
YP_001667534.1	PFAM: protein of unknown function DUF195; KEGG: pen:PSEEN1404 hypothetical protein
YP_001667535.1	PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1405 sensory box histidine kinase/response regulator hybrid
YP_001667536.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN1406 major facilitator family transporter
YP_001667537.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pfo:Pfl_2799 transcriptional regulator, GntR family
YP_001667538.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfo:Pfl_2798 general substrate transporter
YP_001667539.1	PFAM: amidohydrolase 2; KEGG: pfo:Pfl_2797 amidohydrolase 2
YP_001667540.1	PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pen:PSEEN1408 acyltransferase
YP_001667541.1	PFAM: small multidrug resistance protein; KEGG: pen:PSEEN1409 multidrug efflux pump
YP_001667542.1	PFAM: Bile acid:sodium symporter; KEGG: pen:PSEEN1410 transporter; sodium/bile acid transporter family protein
YP_001667543.1	Required for efficient pilin antigenic variation
YP_001667544.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pen:PSEEN1415 methionine aminopeptidase, type I Map
YP_001667545.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: pen:PSEEN1417 assimilatory nitrate reductase
YP_001667546.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pen:PSEEN1418 nitrite reductase, large subunit, nucleotide-and Fe/S-cluster binding
YP_001667547.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: pen:PSEEN1419 nitrite reductase, small subunit NirD
YP_001667548.1	TIGRFAM: pca operon transcription factor PcaQ; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1425 pca operon transcriptional activator PcaQ
YP_001667549.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN1426 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)
YP_001667550.1	PFAM: protein of unknown function DUF1232; KEGG: pen:PSEEN1427 hypothetical protein
YP_001667551.1	PFAM: helix-turn-helix domain protein; KEGG: pen:PSEEN1428 transcriptional regulator, Cro/CI family
YP_001667552.1	KEGG: pen:PSEEN1429 hypothetical protein
YP_001667553.1	PFAM: EAL domain protein; KEGG: pen:PSEEN1430 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains)
YP_001667554.1	KEGG: pen:PSEEN1431 carboxy-terminal protease for penicillin-binding protein 3 Prc; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001667555.1	TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN1432 alcohol dehydrogenase, zinc-containing
YP_001667556.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN1433 hydrolase, haloacid dehalogenase-like family
YP_001667557.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN1434 ABC transporter, ATP-binding protein
YP_001667558.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1435 ABC transporter, permease protein
YP_001667559.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1436 ABC transporter, permease protein
YP_001667560.1	PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: pen:PSEEN1437 hypothetical protein
YP_001667561.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN1438 ABC transporter, periplasmic binding protein
YP_001667562.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pen:PSEEN1439 transcriptional regulator, GntR family
YP_001667563.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pen:PSEEN1440 transporter, mechanosensitive ion channel family protein
YP_001667564.1	KEGG: pen:PSEEN1441 hypothetical protein
YP_001667565.1	catalyzes the removal of amino acids from the N termini of peptides
YP_001667566.1	PFAM: pseudouridine synthase; KEGG: pen:PSEEN1443 ribosomal large subunit pseudouridine synthase A
YP_001667567.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_001667568.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN1445 septum site-determining protein MinD
YP_001667569.1	blocks the formation of polar Z-ring septums
YP_001667570.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
YP_001667571.1	PFAM: Patatin; KEGG: pen:PSEEN1448 hypothetical protein
YP_001667572.1	PFAM: VacJ family lipoprotein; KEGG: pen:PSEEN1449 lipoprotein VacJ-like
YP_001667573.1	KEGG: pen:PSEEN1450 hypothetical protein
YP_001667574.1	KEGG: pen:PSEEN1451 hypothetical protein
YP_001667575.1	KEGG: pen:PSEEN1452 beta (1-6) glucans synthase
YP_001667576.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN1453 glycine betaine-binding protein, ABC type
YP_001667577.1	PFAM: protein of unknown function DUF485; KEGG: pen:PSEEN1454 hypothetical protein
YP_001667578.1	member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake
YP_001667579.1	KEGG: pen:PSEEN1462 hypothetical protein
YP_001667580.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN1463 oxidoreductase, short chain dehydrogenase/reductase family
YP_001667581.1	PFAM: carbon storage regulator; KEGG: pen:PSEEN1464 carbon storage regulator
YP_001667582.1	PFAM: protein of unknown function UPF0270; KEGG: pen:PSEEN1465 hypothetical protein
YP_001667583.1	TIGRFAM: hydrolase, peptidase M42 family; PFAM: peptidase M20; peptidase M42 family protein; KEGG: pen:PSEEN1467 peptidase M42
YP_001667584.1	KEGG: pen:PSEEN1468 acetyltransferase, GNAT family; TIGRFAM: GNAT-family acetyltransferase TIGR03103; PFAM: GCN5-related N-acetyltransferase
YP_001667585.1	KEGG: pen:PSEEN1469 asparagine synthetase AsnB; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase family amidotransferase; PFAM: glutamine amidotransferase class-II; asparagine synthase
YP_001667586.1	catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules
YP_001667587.1	PFAM: protein of unknown function DUF344; KEGG: pen:PSEEN1471 hypothetical protein
YP_001667588.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN1473 hypothetical protein
YP_001667589.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_001667590.1	KEGG: pen:PSEEN1475 hypothetical protein
YP_001667591.1	PFAM: BolA family protein; KEGG: pen:PSEEN1476 transcriptional regulator, BolA superfamily
YP_001667592.1	PFAM: Rhodanese domain protein; KEGG: pen:PSEEN1477 hypothetical protein
YP_001667593.1	PFAM: DSBA oxidoreductase; KEGG: pen:PSEEN1478 hypothetical protein
YP_001667594.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1479 ABC transporter, ATP-binding protein
YP_001667595.1	KEGG: pen:PSEEN1480 sensory box protein/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001667596.1	KEGG: pen:PSEEN1481 hypothetical protein
YP_001667597.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN1482 oxidoreductase, short chain dehydrogenase/reductase family
YP_001667598.1	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate
YP_001667599.1	Involved in ubiquinone biosynthesis
YP_001667600.1	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway
YP_001667601.1	negatively supercoils closed circular double-stranded DNA
YP_001667602.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_001667603.1	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: pen:PSEEN1489 bifunctional chorismate mutase/prephenate dehydratase PheA
YP_001667604.1	catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate and catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_001667605.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_001667606.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_001667607.1	KEGG: pen:PSEEN3227 hypothetical protein
YP_001667608.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_001667609.1	KEGG: pfo:Pfl_4059 hypothetical protein
YP_001667610.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: psp:PSPPH_3659 metallo-beta-lactamase family, beta-CASP subfamily
YP_001667611.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: pen:PSEEN1495 O-antigen chain length regulator protein (Wzz)
YP_001667612.1	PFAM: polysaccharide biosynthesis protein; KEGG: gka:GK3299 O-antigen transporter
YP_001667613.1	KEGG: cpy:Cphy_3500 hemolytic protein HlpA-like protein
YP_001667614.1	KEGG: fps:FP1292 hypothetical protein
YP_001667615.1	PFAM: glycosyl transferase group 1; KEGG: cpy:Cphy_3501 glycosyl transferase group 1
YP_001667616.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: pen:PSEEN1500 polysaccharide biosynthesis protein; O-antigen biosynthesis protein
YP_001667617.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pen:PSEEN1501 nucleoside-diphosphate-sugar epimerase WbjC
YP_001667618.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pen:PSEEN1502 UDP-N-acetylglucosamine 2-epimerase Wbjd
YP_001667619.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN1503 glycosyltransferase (group 1)
YP_001667620.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pen:PSEEN1504 UDP-glucose 4-epimerase
YP_001667621.1	PFAM: glycosyl transferase family 4; KEGG: pen:PSEEN1505 glycosyl transferase WbpL
YP_001667622.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pen:PSEEN1506 dTDP-glucose-4,6-dehydratase/UDP-glucose 4-epimerase WbpM
YP_001667623.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pol:Bpro_4022 dTDP-glucose 4,6-dehydratase
YP_001667624.1	PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: nmu:Nmul_A0265 dTDP-4-dehydrorhamnose reductase
YP_001667625.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pap:PSPA7_5902 glucose-1-phosphate thymidylyltransferase
YP_001667627.1	KEGG: pau:PA14_23440 putative group 1 glycosyl transferase
YP_001667628.1	PFAM: glycosyl transferase group 1; KEGG: bcz:BCZK4972 glycosyl transferase, group 1; possible lipopolysaccharide O antigen biosynthesis protein
YP_001667629.1	KEGG: pde:Pden_2408 hypothetical protein
YP_001667631.1	KEGG: bcz:BCZK4968 hypothetical protein
YP_001667632.1	PFAM: glycosyl transferase group 1; Methyltransferase type 11; Methyltransferase type 12; KEGG: bcz:BCZK4970 hypothetical and glycosyltransferase fusion protein
YP_001667633.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: vha:VIBHAR_00690 UDP-N-acetyl-D-mannosaminuronate dehydrogenase
YP_001667634.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pau:PA14_23370 putative UDP-N-acetylglucosamine 2-epimerase
YP_001667635.1	TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: pen:PSEEN1508 hypothetical protein
YP_001667636.1	KEGG: pen:PSEEN1509 hypothetical protein
YP_001667637.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_001667638.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN1511 zinc-containing alcohol dehydrogenase
YP_001667639.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN1512 oxidoreductase, short chain dehydrogenase/reductase family
YP_001667640.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1517 methyl-accepting chemotaxis transducer
YP_001667641.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN1518 benzoate membrane transport protein (MFS superfamily)
YP_001667642.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN1519 glutathione S-transferase
YP_001667643.1	PFAM: glutaredoxin; KEGG: pen:PSEEN1520 hypothetical protein
YP_001667644.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_001667645.1	PFAM: Smr protein/MutS2; KEGG: pen:PSEEN1522 hypothetical protein
YP_001667646.1	KEGG: pen:PSEEN1523 hypothetical protein
YP_001667647.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN1524 isochorismatase
YP_001667648.1	involved in methylation of ribosomal protein L3
YP_001667649.1	KEGG: pen:PSEEN1526 hypothetical protein
YP_001667650.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN1527 hydrolase, alpha/beta fold family
YP_001667651.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_001667652.1	PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN1530 transporter, MFS family
YP_001667653.1	KEGG: pen:PSEEN1531 oxidase
YP_001667654.1	KEGG: pen:PSEEN1532 hypothetical protein
YP_001667655.1	PFAM: Ankyrin; KEGG: pen:PSEEN1535 hypothetical protein
YP_001667656.1	KEGG: pen:PSEEN1536 hypothetical protein
YP_001667657.1	PFAM: zinc/iron permease; KEGG: pen:PSEEN1537 divalent heavy-metal cations transporter (ZIP family)
YP_001667658.1	KEGG: pen:PSEEN1538 hypothetical protein
YP_001667659.1	PFAM: sulfatase; KEGG: pen:PSEEN1540 membrane sulfatase
YP_001667660.1	KEGG: pen:PSEEN1541 hypothetical protein
YP_001667661.1	PFAM: protein of unknown function DUF1260; KEGG: pen:PSEEN1542 hypothetical protein
YP_001667662.1	KEGG: pen:PSEEN1543 cytochrome c
YP_001667663.1	PFAM: glutamine amidotransferase class-I; KEGG: pen:PSEEN1544 glutamine amidotransferase, class I
YP_001667664.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: pen:PSEEN1545 magnesium/cobalt transporter, MIT family
YP_001667665.1	KEGG: pen:PSEEN1546 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase
YP_001667666.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001667667.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN1548 TonB-dependent ferric siderophore receptor
YP_001667668.1	KEGG: pen:PSEEN1549 hypothetical protein
YP_001667669.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN1555 transport protein (MFS superfamily)
YP_001667670.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1556 transcriptional regulator, LysR family
YP_001667671.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001667672.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1558 transcriptional regulator, LysR family
YP_001667673.1	KEGG: pen:PSEEN1559 hypothetical protein
YP_001667674.1	KEGG: pen:PSEEN1560 hypothetical protein
YP_001667675.1	KEGG: pen:PSEEN1561 hypothetical protein
YP_001667676.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_001667677.1	PFAM: OsmC family protein; KEGG: pen:PSEEN1563 organic hydroperoxide resistance protein
YP_001667678.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN1564 transcriptional regulator (MarR family)
YP_001667679.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1565 transcriptional regulator, LysR family
YP_001667680.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN1566 hypothetical protein
YP_001667681.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1567 transcriptional regulator, LysR family
YP_001667682.1	PFAM: protein of unknown function DUF1127; KEGG: pen:PSEEN1568 hypothetical protein
YP_001667683.1	PFAM: protein of unknown function DUF1006; KEGG: pen:PSEEN1569 hypothetical protein
YP_001667684.1	KEGG: pen:PSEEN1570 phospho-2-dehydro-3-deoxyheptonate aldolase, class II; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II
YP_001667685.1	KEGG: pen:PSEEN1571 hypothetical protein
YP_001667686.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN1572 ATP-dependent RNA helicase, DEAD box family
YP_001667687.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: pen:PSEEN1580 aromatic ring-opening dioxygenase
YP_001667688.1	catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide
YP_001667689.1	putative metalloprotease
YP_001667690.1	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor
YP_001667691.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
YP_001667692.1	PFAM: glutathione peroxidase; KEGG: pen:PSEEN1585 glutathione peroxidase
YP_001667693.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1586 sensor histidine kinase/response regulator hybrid
YP_001667694.1	PFAM: protein of unknown function DUF815; KEGG: pen:PSEEN1587 hypothetical protein
YP_001667695.1	KEGG: pen:PSEEN1588 hypothetical protein
YP_001667696.1	KEGG: pen:PSEEN1589 hypothetical protein
YP_001667697.1	PFAM: Fimbrial protein; KEGG: pst:PSPTO_2227 fimbrial protein, putative
YP_001667698.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pst:PSPTO_2228 outer membrane usher protein FimD
YP_001667699.1	TIGRFAM: YD repeat protein; KEGG: psb:Psyr_2040 YD repeat
YP_001667701.1	KEGG: psb:Psyr_2042 hypothetical protein
YP_001667702.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: psb:Psyr_2044 YD repeat
YP_001667703.1	KEGG: psb:Psyr_2033 hypothetical protein
YP_001667704.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: psb:Psyr_2034 outer membrane autotransporter barrel
YP_001667705.1	KEGG: psb:Psyr_2035 hypothetical protein
YP_001667706.1	PFAM: pili assembly chaperone; KEGG: pst:PSPTO_2229 chaperone protein PapD
YP_001667707.1	PFAM: Fimbrial protein; KEGG: pst:PSPTO_2230 type I pilus biogensis protein FimA
YP_001667708.1	KEGG: pen:PSEEN1593 hypothetical protein
YP_001667709.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_001667710.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN1595 glutathione S-transferase
YP_001667711.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1596 ABC transporter, ATP-binding protein
YP_001667712.1	PFAM: ABC-2 type transporter; KEGG: pen:PSEEN1597 ABC transporter, permease protein
YP_001667713.1	KEGG: pen:PSEEN1598 hypothetical protein
YP_001667714.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: pfo:Pfl_4178 DNA internalization-like competence protein ComEC/Rec2
YP_001667715.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: pen:PSEEN1601 transporter, MotA/TolQ/ExbB proton channel family protein
YP_001667716.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pen:PSEEN1602 biopolymer transport protein ExbD/TolR family
YP_001667717.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_001667718.1	PFAM: protein of unknown function DUF343; KEGG: pen:PSEEN1604 hypothetical protein
YP_001667719.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_001667720.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pen:PSEEN1606 low molecular weight phosphotyrosine protein phosphatase
YP_001667721.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_001667722.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: pen:PSEEN1608 ribonuclease E Rne
YP_001667723.1	KEGG: pen:PSEEN1609 23S rRNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001667724.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN1610 hydrolase, haloacid dehalogenase-like family
YP_001667725.1	TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: pen:PSEEN1611 peptidase SppA
YP_001667726.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_001667727.1	PFAM: protein of unknown function DUF177; KEGG: pen:PSEEN1614 hypothetical protein
YP_001667728.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_001667729.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_001667730.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: pen:PSEEN1617 malonyl-CoA-[acyl-carrier-protein] transacylase
YP_001667731.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001667732.1	carries the fatty acid chain in fatty acid biosynthesis
YP_001667733.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001667734.1	catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate
YP_001667735.1	PFAM: aminodeoxychorismate lyase; KEGG: pen:PSEEN1623 hypothetical protein
YP_001667736.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_001667737.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA
YP_001667738.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: pen:PSEEN1627 deoxyribonuclease, TatD family
YP_001667740.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN1629 transcriptional regulator, TetR family
YP_001667741.1	PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pen:PSEEN1630 molybdenum cofactor biosynthesis protein A
YP_001667742.1	KEGG: pen:PSEEN1631 lipoprotein
YP_001667743.1	PFAM: protein of unknown function DUF1285; KEGG: pen:PSEEN1632 hypothetical protein
YP_001667744.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN1633 hypothetical protein
YP_001667745.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_001667746.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_001667747.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN1637 drug resistance transporter, EmrB/QacA family
YP_001667748.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN1638 HlyD family secretion protein
YP_001667749.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_001667750.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN1643 transcriptional regulator, TetR family
YP_001667751.1	KEGG: pen:PSEEN1644 hydrolase
YP_001667752.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN1645 hypothetical protein
YP_001667753.1	PFAM: dihydrouridine synthase DuS; KEGG: pen:PSEEN1646 tRNA-dihydrouridine synthase C
YP_001667754.1	PFAM: heat shock protein Hsp20; KEGG: pen:PSEEN1647 small heat-shock protein IbpA
YP_001667755.1	KEGG: pen:PSEEN1648 sensory box/GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001667756.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1649 transcriptional regulator, LysR family
YP_001667757.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_001667758.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_001667759.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pfo:Pfl_1891 UbiE/COQ5 methyltransferase
YP_001667760.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_001667761.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_001667762.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pap:PSPA7_1717 probable sigma-70 factor, ECF subfamily
YP_001667763.1	PFAM: FecR protein; KEGG: pen:PSEEN4767 FecR-like transmembrane sensor
YP_001667764.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mmw:Mmwyl1_4301 TonB-dependent receptor
YP_001667765.1	KEGG: plu:plu3515 hypothetical protein
YP_001667766.1	KEGG: mmw:Mmwyl1_4303 conserved hypothetical protein; putative peptide signal
YP_001667767.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_001667768.1	PFAM: Peptidoglycan-binding LysM; KEGG: pen:PSEEN1688 hypothetical protein
YP_001667769.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_001667770.1	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis
YP_001667771.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits
YP_001667772.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: pen:PSEEN1692 folylpolyglutamate synthase
YP_001667773.1	PFAM: Sporulation domain protein; KEGG: pen:PSEEN1693 hypothetical protein
YP_001667774.1	PFAM: Colicin V production protein; KEGG: pen:PSEEN1694 bacteriocin production protein CvpA
YP_001667775.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_001667776.1	catalyzes the conversion of O-succinylhomoserine into homocysteine
YP_001667777.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN1697 oxidoreductase, short chain dehydrogenase/reductase family
YP_001667778.1	KEGG: pen:PSEEN1700 hypothetical protein
YP_001667779.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN1701 transcriptional regulator, AraC family
YP_001667780.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN1702 hypothetical protein
YP_001667781.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: pen:PSEEN1703 2,4-dienoyl-CoA reductase
YP_001667782.1	KEGG: pen:PSEEN1704 1-aminocyclopropane-1-carboxylate deaminase
YP_001667783.1	PFAM: cytochrome B561; KEGG: pen:PSEEN1705 cytochrome b(561)
YP_001667784.1	PFAM: Domain of unknown function DUF1853; KEGG: pen:PSEEN1707 hypothetical protein
YP_001667785.1	catalyzes the phosphorylation of NAD to NADP
YP_001667786.1	PFAM: metallophosphoesterase; KEGG: pen:PSEEN1709 serine/threonine protein phosphatase
YP_001667787.1	PFAM: Rhomboid family protein; KEGG: pen:PSEEN1710 hypothetical protein
YP_001667788.1	PFAM: protein of unknown function DUF1315; KEGG: pen:PSEEN1711 hypothetical protein
YP_001667789.1	KEGG: pen:PSEEN1712 hypothetical protein
YP_001667790.1	TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: pen:PSEEN1713 aminopeptidase N
YP_001667791.1	KEGG: pen:PSEEN1714 hypothetical protein
YP_001667792.1	KEGG: pen:PSEEN1715 hypothetical protein
YP_001667793.1	KEGG: pen:PSEEN1716 hypothetical protein
YP_001667794.1	KEGG: pen:PSEEN1717 hypothetical protein
YP_001667795.1	KEGG: pen:PSEEN1719 hypothetical protein
YP_001667796.1	PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: pen:PSEEN1720 glutathione S-transferase
YP_001667797.1	PFAM: SMC domain protein; KEGG: pen:PSEEN1721 exonuclease SbcC
YP_001667798.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: pen:PSEEN1722 exonuclease SbcD
YP_001667799.1	KEGG: cbd:COXBU7E912_A0039 rhs repeat domain protein
YP_001667800.1	KEGG: pen:PSEEN1725 hypothetical protein
YP_001667801.1	PFAM: TPR repeat-containing protein; von Willebrand factor type A; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN1726 hypothetical protein
YP_001667802.1	PFAM: von Willebrand factor type A; KEGG: pen:PSEEN1727 hypothetical protein
YP_001667803.1	KEGG: pen:PSEEN1728 hypothetical protein
YP_001667804.1	PFAM: protein of unknown function DUF58; KEGG: pen:PSEEN1729 hypothetical protein
YP_001667805.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pen:PSEEN1730 ATPase, MoxR-like protein
YP_001667806.1	KEGG: pap:PSPA7_3887 rhs element Vgr protein
YP_001667807.1	PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4437 MFS efflux transporter
YP_001667808.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: dac:Daci_3710 benzoate transporter
YP_001667809.1	PFAM: dihydrodipicolinate synthetase; KEGG: pap:PSPA7_0309 probable dihydrodipicolinate synthetase
YP_001667810.1	PFAM: class II aldolase/adducin family protein; KEGG: pae:PA0224 hypothetical protein
YP_001667811.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl_1910 GCN5-related N-acetyltransferase
YP_001667812.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; Mannitol dehydrogenase domain; KEGG: mfa:Mfla_1729 HAD-superfamily hydrolase subfamily IA, variant 3
YP_001667813.1	KEGG: pfl:PFL_2311 hypothetical protein
YP_001667814.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_1268 putative HTH-type transcriptional regulator YbhD
YP_001667815.1	PFAM: protein of unknown function DUF453; KEGG: pap:PSPA7_1269 FldA protein
YP_001667816.1	PFAM: sodium:dicarboxylate symporter; KEGG: pap:PSPA7_1270 aerobic C4-dicarboxylate transport protein
YP_001667817.1	TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pap:PSPA7_1271 citrate transporter
YP_001667818.1	PFAM: outer membrane porin; KEGG: pap:PSPA7_1272 outer membrane porin OprE
YP_001667819.1	PFAM: CsbD family protein; KEGG: pfl:PFL_2569 hypothetical protein
YP_001667820.1	TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rme:Rmet_4538 transcriptional regulator, MerR family
YP_001667821.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pap:PSPA7_0892 probable RND efflux membrane fusion protein precursor
YP_001667822.1	PFAM: acriflavin resistance protein; KEGG: pap:PSPA7_0891 probable RND efflux transporter
YP_001667823.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: dac:Daci_1440 transcriptional regulator, GntR family
YP_001667824.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pau:PA14_45980 putative acetyltransferase
YP_001667825.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_1484 transcriptional regulator, LysR family
YP_001667826.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfl:PFL_2293 outer membrane ferripyoverdine receptor
YP_001667827.1	PFAM: FecR protein; KEGG: pau:PA14_28980 possible Fe2+-dicitrate sensor
YP_001667828.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN2531 RNA polymerase sigma-70 factor, ECF subfamily
YP_001667829.1	catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding
YP_001667830.1	activates the transcription of the lysA gene encoding diaminopimelate decarboxylase
YP_001667831.1	KEGG: pen:PSEEN1739 hypothetical protein
YP_001667832.1	PFAM: NAD-glutamate dehydrogenase; KEGG: pen:PSEEN1740 NAD-specific glutamate dehydrogenase; arginine inducible
YP_001667833.1	PFAM: protein of unknown function DUF299; KEGG: pen:PSEEN1741 hypothetical protein
YP_001667834.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001667835.1	KEGG: pen:PSEEN1743 hydrolase, alpha/beta fold family
YP_001667836.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_001667837.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: pen:PSEEN1745 metal ion transporter CmaX protein
YP_001667838.1	KEGG: pen:PSEEN1747 hypothetical protein
YP_001667839.1	PFAM: Conserved TM helix repeat-containing protein; KEGG: pen:PSEEN1748 hypothetical protein
YP_001667840.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas fluorescens and P. aeruginosa regulates outer membrane protein OprF expression
YP_001667841.1	PFAM: OmpA/MotB domain protein; OmpF family protein; KEGG: psp:PSPPH_2068 OprF
YP_001667842.1	catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1
YP_001667843.1	SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: pen:PSEEN1751 bifunctional serine/threonine-protein kinase and phosphatase
YP_001667844.1	TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN1752 nitrate transporter
YP_001667845.1	PFAM: response regulator receiver; ANTAR domain protein; KEGG: pen:PSEEN1753 response regulator NasT
YP_001667846.1	KEGG: pen:PSEEN1754 nitrate-binding protein NasS
YP_001667847.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_001667848.1	PFAM: ribosome modulation factor; KEGG: pen:PSEEN1756 ribosome modulation factor
YP_001667849.1	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA
YP_001667850.1	KEGG: pen:PSEEN1758 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001667851.1	TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: pen:PSEEN3770 D-alanyl-D-alanine carboxypeptidase
YP_001667852.1	PFAM: protein of unknown function DUF469; KEGG: pen:PSEEN3769 hypothetical protein
YP_001667853.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: pen:PSEEN3768 two-component sensor/response regulator protein
YP_001667854.1	PFAM: transposase IS3/IS911 family protein; KEGG: pen:PSEEN3943 transposase, IS3 family (orf 1)
YP_001667855.1	PFAM: Integrase catalytic region; KEGG: pen:PSEEN3944 transposase, IS3 family (orf 2)
YP_001667856.1	KEGG: xcv:XCV1411 heat shock protein
YP_001667857.1	PFAM: beta-lactamase domain protein; KEGG: hha:Hhal_1314 beta-lactamase domain protein
YP_001667858.1	PFAM: Group II intron maturase-specific domain protein; KEGG: ajs:Ajs_2219 RNA-directed DNA polymerase
YP_001667859.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ste:STER_1356 radical SAM superfamily enzyme
YP_001667860.1	PFAM: helix-turn-helix domain protein; KEGG: pst:PSPTO_4630 transcriptional regulator, PbsX family
YP_001667861.1	KEGG: ajs:Ajs_0813 hypothetical protein
YP_001667865.1	KEGG: xcb:XC_2074 hypothetical protein
YP_001667866.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: hch:HCH_06283 predicted Zn peptidase
YP_001667868.1	KEGG: ent:Ent638_1530 transposase IS116/IS110/IS902 family protein
YP_001667869.1	KEGG: rru:Rru_A3021 hypothetical protein
YP_001667870.1	KEGG: vvy:VV1821 hypothetical protein
YP_001667871.1	KEGG: psp:PSPPH_4978 prophage PSPPH06, putative reverse transcriptase/maturase
YP_001667872.1	KEGG: gur:Gura_3511 hypothetical protein
YP_001667873.1	KEGG: pst:PSPTO_4755 hypothetical protein
YP_001667874.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: psp:PSPPH_4979 prophage PSPPH06, putative reverse transcriptase/maturase
YP_001667875.1	KEGG: psb:Psyr_4647 hypothetical protein
YP_001667876.1	KEGG: gka:GK0172 Hnh endonuclease
YP_001667877.1	PFAM: integrase family protein; KEGG: mmw:Mmwyl1_4220 phage integrase family protein
YP_001667879.1	KEGG: mmw:Mmwyl1_4222 phage integrase family protein
YP_001667880.1	KEGG: mmw:Mmwyl1_4223 hypothetical protein
YP_001667881.1	TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein family 3; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: pen:PSEEN3768 two-component sensor/response regulator protein
YP_001667882.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN3767 DNA-binding response regulator, LuxR family
YP_001667883.1	dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_001667884.1	KEGG: pen:PSEEN3765 hypothetical protein
YP_001667885.1	KEGG: pen:PSEEN3764 hypothetical protein
YP_001667886.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN3763 hypothetical protein
YP_001667887.1	PFAM: Rh family protein/ammonium transporter; KEGG: pen:PSEEN3762 ammonium transporter
YP_001667888.1	PFAM: glutaredoxin 2; KEGG: pen:PSEEN3761 hypothetical protein
YP_001667889.1	PFAM: Peptidase M15A; KEGG: bte:BTH_II1066 hypothetical protein
YP_001667890.1	KEGG: pen:PSEEN3760 hypothetical protein
YP_001667891.1	PFAM: pseudouridine synthase; KEGG: pen:PSEEN3759 pseudouridylate synthase
YP_001667892.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: pen:PSEEN3758 aerotaxis receptor
YP_001667893.1	catalyzes the conversion of citrate to isocitrate
YP_001667894.1	KEGG: pen:PSEEN3755 hypothetical protein
YP_001667895.1	TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs
YP_001667896.1	Required for the de novo synthesis of pyroxidine via the pdxA branch; catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate
YP_001667897.1	KEGG: pen:PSEEN3752 hypothetical protein
YP_001667898.1	KEGG: pen:PSEEN3751 ABC efflux transporter, permease/ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001667899.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN3750 methyl-accepting chemotaxis histidine kinase
YP_001667900.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_001667901.1	PFAM: protein of unknown function DUF903; KEGG: pen:PSEEN3747 hypothetical protein
YP_001667902.1	TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: pen:PSEEN3745 molybdopterin biosynthesis protein B
YP_001667903.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: pen:PSEEN3744 molybdopterin biosynthesis protein, molybdenum incorporation step
YP_001667904.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN3743 glycosyl transferase
YP_001667905.1	cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role
YP_001667906.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN3740 DNA-binding response regulator, LuxR family
YP_001667907.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: pen:PSEEN3739 sensor histidine kinase
YP_001667908.1	KEGG: pen:PSEEN3737 hypothetical protein
YP_001667909.1	PFAM: response regulator receiver; CheW domain protein; KEGG: pen:PSEEN3735 chemotaxis protein CheV
YP_001667910.1	PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: pen:PSEEN3734 hypothetical protein
YP_001667911.1	PFAM: Lytic transglycosylase catalytic; KEGG: pen:PSEEN3733 lytic murein transglycosylase, soluble
YP_001667912.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3732 ABC transporter, ATP-binding protein
YP_001667913.1	PFAM: UspA domain protein; KEGG: pen:PSEEN3731 universal stress protein family
YP_001667914.1	KEGG: pen:PSEEN3730 hypothetical protein
YP_001667915.1	includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_001667916.1	FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_001667917.1	PFAM: protein of unknown function DUF1653; KEGG: pen:PSEEN3726 hypothetical protein
YP_001667918.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_001667919.1	KEGG: pen:PSEEN3724 hypothetical protein
YP_001667920.1	KEGG: pen:PSEEN3723 hypothetical protein
YP_001667921.1	KEGG: pen:PSEEN3722 cell division inhibitor-related protein, SulA-like
YP_001667922.1	Represses a number of genes involved in the response to DNA damage
YP_001667923.1	PFAM: regulatory protein TetR; KEGG: pfl:PFL_1950 transcriptional regulator, TetR family
YP_001667924.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pen:PSEEN3719 hypothetical protein
YP_001667925.1	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
YP_001667926.1	KEGG: pen:PSEEN3717 helicase, SNF2/RAD54 family; PFAM: SNF2-related protein; helicase domain protein; zinc finger SWIM domain protein; SMART: DEAD-like helicases
YP_001667927.1	KEGG: pen:PSEEN3716 hypothetical protein
YP_001667928.1	KEGG: pen:PSEEN3715 transcription-repair coupling protein; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001667929.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent
YP_001667930.1	PFAM: ApbE family lipoprotein; KEGG: pen:PSEEN3713 thiamine biosynthesis lipoprotein ApbE-like
YP_001667931.1	catalyzes the conversion of NADPH to NADH
YP_001667932.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pen:PSEEN3710 glycerophosphoryl diester phosphodiesterase
YP_001667933.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN3709 hypothetical protein
YP_001667934.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN3708 lipoprotein releasing system transmembrane protein LolC
YP_001667935.1	KEGG: pen:PSEEN3707 lipoprotein releasing system, ATP-binding protein LolD; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001667936.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN3706 lipoprotein releasing system transmembrane protein LolE
YP_001667937.1	TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3705 heavy metal sensor histidine kinase
YP_001667938.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3704 DNA-binding heavy metal response regulator
YP_001667939.1	PFAM: blue (type 1) copper domain protein; KEGG: pen:PSEEN3703 copper-binding protein
YP_001667940.1	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
YP_001667941.1	KEGG: pen:PSEEN3701 hypothetical protein
YP_001667942.1	KEGG: pen:PSEEN3700 hypothetical protein
YP_001667943.1	PFAM: VacJ family lipoprotein; KEGG: pen:PSEEN3699 VacJ lipoprotein
YP_001667944.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN3698 hypothetical protein
YP_001667945.1	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: pen:PSEEN3696 response regulator
YP_001667946.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pen:PSEEN3695 anti-anti-sigma factor
YP_001667947.1	KEGG: pen:PSEEN3694 hypothetical protein
YP_001667948.1	KEGG: pen:PSEEN3692 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_001667949.1	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: pen:PSEEN3691 tRNA-dihydrouridine synthase A
YP_001667950.1	PFAM: integrase family protein; KEGG: pfl:PFL_1976 site-specific recombinase, phage integrase family
YP_001667951.1	KEGG: pap:PSPA7_2364 hypothetical protein
YP_001667953.1	KEGG: aav:Aave_1600 hypothetical protein
YP_001667955.1	KEGG: shn:Shewana3_2488 hypothetical protein
YP_001667956.1	KEGG: pap:PSPA7_2374 C-5 cytosine-specific DNA methylase
YP_001667957.1	PFAM: IS66 Orf2 family protein; KEGG: pst:PSPTO_3221 ISPsy5, Orf1
YP_001667958.1	PFAM: transposase IS66; KEGG: pst:PSPTO_5591 ISPsy5, transposase
YP_001667959.1	KEGG: pap:PSPA7_2374 C-5 cytosine-specific DNA methylase
YP_001667960.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: xau:Xaut_3681 exonuclease RNase T and DNA polymerase III
YP_001667961.1	PFAM: SMC domain protein; KEGG: pap:PSPA7_2377 hypothetical protein
YP_001667962.1	KEGG: eba:ebA7041 cell division FtsK transmembrane protein
YP_001667963.1	KEGG: pap:PSPA7_2379 hypothetical protein
YP_001667964.1	KEGG: pap:PSPA7_2380 hypothetical protein
YP_001667965.1	KEGG: pap:PSPA7_2382 hypothetical protein
YP_001667971.1	KEGG: cps:CPS_1624 hypothetical protein
YP_001667972.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: yps:YPTB1790 putative prophage repressor protein
YP_001667973.1	KEGG: stm:STM0898A hypothetical protein
YP_001667974.1	KEGG: net:Neut_1482 hypothetical protein
YP_001667975.1	PFAM: protein of unknown function DUF1376; KEGG: spq:SPAB_02260 hypothetical protein
YP_001667976.1	KEGG: pap:PSPA7_2397 hypothetical protein
YP_001667978.1	PFAM: endodeoxyribonuclease RusA; KEGG: pap:PSPA7_2398 endodeoxyribonuclease RusA
YP_001667979.1	KEGG: psb:Psyr_2805 hypothetical protein
YP_001667980.1	KEGG: pvi:Cvib_0124 hypothetical protein
YP_001667982.1	PFAM: glycoside hydrolase family 24; KEGG: pna:Pnap_3296 prophage LambdaSo, lysozyme, putative
YP_001667983.1	PFAM: lysis protein; KEGG: pen:PSEEN4130 phage protein
YP_001667984.1	PFAM: Terminase small subunit; KEGG: bmu:Bmul_1829 terminase small subunit
YP_001667985.1	KEGG: ecv:APECO1_4038 putative phage terminase, large subunit
YP_001667987.1	KEGG: ecv:APECO1_4041 putative tail protein
YP_001667988.1	KEGG: ecv:APECO1_4042 hypothetical protein
YP_001667989.1	KEGG: ecv:APECO1_4043 hypothetical protein
YP_001667990.1	KEGG: ecv:APECO1_4044 hypothetical protein
YP_001667991.1	KEGG: ecv:APECO1_4045 hypothetical protein
YP_001667993.1	KEGG: ecv:APECO1_4048 hypothetical protein
YP_001667994.1	KEGG: ecv:APECO1_4049 hypothetical protein
YP_001667995.1	KEGG: ecv:APECO1_4050 hypothetical protein
YP_001667996.1	KEGG: pde:Pden_3769 hypothetical protein
YP_001667997.1	KEGG: spe:Spro_3877 lytic transglycosylase catalytic
YP_001667998.1	KEGG: spe:Spro_3876 hypothetical protein
YP_001667999.1	KEGG: spe:Spro_3875 hypothetical protein
YP_001668000.1	KEGG: bvi:Bcep1808_1185 parallel beta-helix repeat
YP_001668001.1	PFAM: acyltransferase 3; KEGG: azo:azo3580 putative acyltransferase family protein
YP_001668003.1	KEGG: pfl:PFL_1976 site-specific recombinase, phage integrase family
YP_001668004.1	PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: pen:PSEEN0327 bifunctional protein (MaeB) [includes: malic oxidoreductase N-terminal; phosphotransacetylase C-terminal]
YP_001668005.1	KEGG: mms:mma_0878 hypothetical protein
YP_001668006.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_001668007.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_001668008.1	TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: bam:Bamb_5904 dihydroorotate dehydrogenase family protein
YP_001668009.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bam:Bamb_5905 oxidoreductase FAD-binding domain protein
YP_001668010.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: spe:Spro_3798 major facilitator superfamily MFS_1
YP_001668011.1	KEGG: azo:azo3511 conserved hypothetical secreted protein
YP_001668012.1	PFAM: helix-turn-helix domain protein; KEGG: acr:Acry_2262 helix-turn-helix domain protein
YP_001668013.1	PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: pen:PSEEN3410 transcriptional regulator, AraC family
YP_001668015.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pen:PSEEN3672 hypothetical protein
YP_001668016.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: pfl:PFL_2399 hypothetical protein
YP_001668017.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pae:PA0476 probable permease
YP_001668018.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pap:PSPA7_4791 hypothetical protein
YP_001668019.1	KEGG: pap:PSPA7_4792 hypothetical protein
YP_001668020.1	PFAM: protein of unknown function DUF533; KEGG: pen:PSEEN2539 hypothetical protein
YP_001668021.1	PFAM: aminotransferase class V; KEGG: pen:PSEEN2741 serine-pyruvate transaminase
YP_001668022.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3287 transcriptional regulator, LysR family
YP_001668023.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bmu:Bmul_3720 transcriptional regulator, XRE family
YP_001668024.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN2186 glutamine synthetase
YP_001668025.1	PFAM: peptidase C26; KEGG: pap:PSPA7_0388 probable glutamine amidotransferase
YP_001668026.1	PFAM: aminotransferase class-III; KEGG: pen:PSEEN5296 aminotransferase, class III
YP_001668027.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bmu:Bmul_3720 transcriptional regulator, XRE family
YP_001668028.1	PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: pap:PSPA7_2621 ProQ activator of osmoprotectant transporter ProP
YP_001668029.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_1814 major facilitator family transporter
YP_001668030.1	PFAM: protein of unknown function DUF925; KEGG: pen:PSEEN3673 hypothetical protein
YP_001668031.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA4375 AraC family transcriptional regulator
YP_001668032.1	PFAM: aminoglycoside phosphotransferase; KEGG: eca:ECA4376 hypothetical protein
YP_001668033.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001668034.1	PFAM: amino acid permease-associated region; KEGG: vei:Veis_0667 amino acid permease-associated region
YP_001668035.1	PFAM: aminotransferase class-III; KEGG: bmu:Bmul_5426 aminotransferase class-III
YP_001668036.1	PFAM: AMP-dependent synthetase and ligase; KEGG: aeh:Mlg_1396 AMP-dependent synthetase and ligase
YP_001668037.1	PFAM: luciferase family protein; KEGG: pst:PSPTO_2590 bacterial luciferase family protein
YP_001668039.1	KEGG: pae:PA4155 hypothetical protein
YP_001668040.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_3620 ferric vibriobactin receptor, putative
YP_001668041.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pau:PA14_10190 putative transcriptional regulator
YP_001668042.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_3622 ferric enterobactin transport protein FepC
YP_001668043.1	with FepCDG is involved in the transport of ferric enterobactin
YP_001668044.1	PFAM: transport system permease protein; KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter permease protein
YP_001668045.1	PFAM: transport system permease protein; KEGG: pau:PA14_10140 ferric enterobactin transport protein FepG
YP_001668046.1	catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor
YP_001668047.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: pen:PSEEN1827 formate dehydrogenase, beta subunit
YP_001668048.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pen:PSEEN1828 formate dehydrogenase, alpha subunit
YP_001668049.1	KEGG: pen:PSEEN1829 formate dehydrogenase, delta subunit
YP_001668050.1	PFAM: UspA domain protein; KEGG: pae:PA1789 hypothetical protein
YP_001668051.1	PFAM: tRNA--hydroxylase; KEGG: pen:PSEEN3516 hypothetical protein
YP_001668052.1	PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN3515 hypothetical protein
YP_001668053.1	KEGG: pen:PSEEN3514 hypothetical protein
YP_001668054.1	SMART: Water Stress and Hypersensitive response domain protein; KEGG: pen:PSEEN3512 lipoprotein
YP_001668055.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pfl:PFL_3156 RNA polymerase sigma-70 factor, ECF subfamily
YP_001668056.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfl:PFL_3154 outer membrane ferric siderophore receptor
YP_001668057.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3511 transcriptional regulator, LysR family
YP_001668058.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN3510 periplasmic polyamine-binding protein
YP_001668059.1	catalyzes the formation of putrescine from agmatine
YP_001668060.1	KEGG: pen:PSEEN3508 hypothetical protein
YP_001668061.1	PFAM: glucose sorbosone dehydrogenase; KEGG: pen:PSEEN3507 glucose/sorbosone dehydrogenase
YP_001668062.1	PFAM: AFG1-family ATPase; KEGG: pen:PSEEN3506 AFG1-like ATPase
YP_001668063.1	PFAM: alpha/beta hydrolase fold; KEGG: pst:PSPTO_3264 hydrolase, alpha/beta fold family
YP_001668064.1	KEGG: pen:PSEEN3504 hypothetical protein
YP_001668065.1	PFAM: protein of unknown function DUF411; KEGG: pen:PSEEN3503 hypothetical protein
YP_001668066.1	PFAM: copper resistance B precursor; KEGG: pen:PSEEN3502 copper resistance protein B
YP_001668067.1	TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pen:PSEEN3501 copper resistance protein A precursor
YP_001668068.1	PFAM: peptidase U32; KEGG: pen:PSEEN3499 protease, U32 family
YP_001668069.1	PFAM: protein of unknown function UPF0118; KEGG: pen:PSEEN3498 hypothetical protein
YP_001668070.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pfl:PFL_5228 transcriptional regulator, GntR family
YP_001668071.1	KEGG: pen:PSEEN2896 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_001668072.1	catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate
YP_001668073.1	catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate
YP_001668074.1	TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3552 transcriptional regulator, LysR family
YP_001668075.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3551 transcriptional regulator, AraC family
YP_001668076.1	PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN3550 hypothetical protein
YP_001668077.1	SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN3550 hypothetical protein
YP_001668078.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pen:PSEEN3549 acetyl-coA synthetase/AMP-(fatty) acid ligase FadDx
YP_001668079.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN3548 3-hydroxyacyl-CoA dehydrogenase FadB2x
YP_001668080.1	KEGG: pen:PSEEN3547 acetyl-CoA acetyltransferase with thiolase domain FadAx; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein
YP_001668081.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN3546 acyl-CoA dehydrogenase protein FadFx
YP_001668082.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pen:PSEEN3545 enoyl-CoA hydratase, FadB1x
YP_001668083.1	PFAM: zinc finger DksA/TraR C4-type; KEGG: pen:PSEEN3543 RNA polymerase-binding protein DksA
YP_001668084.1	KEGG: pen:PSEEN3541 hypothetical protein
YP_001668085.1	KEGG: pen:PSEEN3540 hypothetical protein
YP_001668086.1	KEGG: pen:PSEEN3539 hypothetical protein
YP_001668087.1	subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_001668088.1	subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_001668089.1	subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_001668090.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
YP_001668091.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_001668092.1	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
YP_001668093.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3532 hypothetical protein
YP_001668094.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN3531 transcriptional regulator, Cro/CI family
YP_001668095.1	PFAM: isochorismatase hydrolase; KEGG: pfo:Pfl_5042 isochorismatase hydrolase
YP_001668096.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pfo:Pfl_5041 transcriptional regulator, AraC family
YP_001668097.1	KEGG: pen:PSEEN3529 hypothetical protein
YP_001668098.1	KEGG: pmy:Pmen_2291 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein
YP_001668099.1	KEGG: pmy:Pmen_2290 hypothetical protein
YP_001668100.1	PFAM: creatinase; peptidase M24; KEGG: pen:PSEEN3528 peptidase, M24 family protein
YP_001668101.1	KEGG: pen:PSEEN3527 lipoprotein
YP_001668102.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3524 transporter, EamA family
YP_001668103.1	PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN1831 ABC efflux transporter, permease/ATP-binding protein
YP_001668104.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll2640 major facilitator superfamily transporter
YP_001668105.1	PFAM: regulatory protein TetR; KEGG: pfl:PFL_2706 transcriptional regulator, TetR family
YP_001668106.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bmu:Bmul_6019 permease for cytosine/purines uracil thiamine allantoin
YP_001668107.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: rle:RL3344 putative dehydrogenase
YP_001668108.1	PFAM: Aldehyde Dehydrogenase; KEGG: bpd:BURPS668_A0734 aldehyde dehydrogenase (NAD) family protein
YP_001668109.1	Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space
YP_001668110.1	KEGG: bbr:BB3605 putative iron uptake protein
YP_001668111.1	PFAM: PepSY-associated TM helix domain protein; KEGG: pfo:Pfl_0927 aspartate kinase
YP_001668112.1	KEGG: bbr:BB3603 putative iron uptake protein
YP_001668113.1	PFAM: Phosphoglycerate mutase; KEGG: pfl:PFL_2248 phosphoglycerate mutase family protein
YP_001668114.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN1839 hypothetical protein
YP_001668115.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pfl:PFL_0806 DNA-binding protein
YP_001668116.1	PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_0805 FAD dependent oxidoreductase
YP_001668117.1	PFAM: Endoribonuclease L-PSP; KEGG: pen:PSEEN1840 endoribonuclease
YP_001668118.1	KEGG: pfl:PFL_0803 hypothetical protein
YP_001668119.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1841 methyl-accepting chemotaxis transducer
YP_001668120.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1842 transcriptional regulator, LysR family
YP_001668121.1	PFAM: transmembrane pair domain protein; KEGG: pen:PSEEN1843 hypothetical protein
YP_001668122.1	KEGG: pen:PSEEN1844 hypothetical protein
YP_001668123.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1847 transcriptional regulator, GntR family
YP_001668124.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1848 transcriptional regulator, GntR family
YP_001668125.1	involved in the transport of C4-dicarboxylates across the membrane
YP_001668126.1	PFAM: helix-turn-helix domain protein; KEGG: pen:PSEEN1850 transcriptional regulator, Cro/CI family
YP_001668127.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: pen:PSEEN1851 aerotaxis receptor Aer-1
YP_001668128.1	KEGG: pen:PSEEN1852 sensory box-containing diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001668129.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN1854 transcriptional regulator, AsnC family
YP_001668130.1	catalyzes the formation of L-proline from L-ornithine
YP_001668131.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: psp:PSPPH_1680 sigma-54 dependent transcriptional regulator
YP_001668132.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psp:PSPPH_1681 ABC transporter, ATP-binding protein
YP_001668133.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: psp:PSPPH_1682 ABC transporter, ATP-binding protein
YP_001668134.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_2044 binding-protein-dependent transport systems inner membrane component
YP_001668135.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_3632 binding-protein-dependent transport systems inner membrane component
YP_001668136.1	KEGG: pmy:Pmen_2046 small integral membrane protein-like protein
YP_001668137.1	KEGG: pfo:Pfl_3630 extracellular solute-binding protein, family 1
YP_001668138.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_001668139.1	KEGG: pen:PSEEN1866 hypothetical protein
YP_001668140.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_001668141.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_001668142.1	binds and unfolds substrates as part of the ClpXP protease
YP_001668143.1	KEGG: pen:PSEEN1870 DNA-binding ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001668144.1	PFAM: histone family protein DNA-binding protein; KEGG: pen:PSEEN1871 DNA-binding protein HU-beta
YP_001668145.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: pen:PSEEN1872 peptidyl-prolyl cis-trans isomerase D
YP_001668146.1	PFAM: Patatin; KEGG: pen:PSEEN1873 patatin-like phospholipase
YP_001668147.1	KEGG: pen:PSEEN1874 lipoprotein
YP_001668148.1	PFAM: CHAD domain containing protein; KEGG: pen:PSEEN1875 hypothetical protein
YP_001668149.1	KEGG: pen:PSEEN1876 acyl-CoA thioesterase II
YP_001668150.1	KEGG: pen:PSEEN1877 hypothetical protein
YP_001668151.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1878 methyl-accepting chemotaxis transducer
YP_001668152.1	PFAM: TatD-related deoxyribonuclease; KEGG: pen:PSEEN1879 deoxyribonuclease, TatD family
YP_001668153.1	PFAM: Lytic transglycosylase catalytic; KEGG: pen:PSEEN1880 lytic transglycosylase
YP_001668154.1	PFAM: DoxX family protein; KEGG: pen:PSEEN1881 hypothetical protein
YP_001668155.1	KEGG: pen:PSEEN1882 hypothetical protein
YP_001668156.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_001668157.1	PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN1884 hypothetical protein
YP_001668158.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1885 ABC transporter, ATP-binding protein
YP_001668159.1	PFAM: lipolytic protein G-D-S-L family; KEGG: pen:PSEEN1886 arylesterase
YP_001668160.1	KEGG: pen:PSEEN1887 hypothetical protein
YP_001668161.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pen:PSEEN1888 hypothetical protein
YP_001668162.1	KEGG: pen:PSEEN1889 outer membrane lipoprotein OprI
YP_001668163.1	KEGG: pen:PSEEN1890 hypothetical protein
YP_001668164.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_001668165.1	catalyzes the formation of 2-dehydropantoate from (R)-pantoate
YP_001668166.1	PFAM: UspA domain protein; KEGG: pen:PSEEN1894 hypothetical protein
YP_001668167.1	LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation
YP_001668168.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_001668169.1	KEGG: pen:PSEEN1897 para-aminodeoxychorismate synthase subunit I PabB; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like
YP_001668170.1	TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: pen:PSEEN1898 hypothetical protein
YP_001668171.1	KEGG: pen:PSEEN1899 hypothetical protein
YP_001668172.1	PFAM: protein of unknown function DUF785; KEGG: pen:PSEEN1900 hypothetical protein
YP_001668173.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1901 transcriptional regulator, GntR family
YP_001668174.1	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate
YP_001668175.1	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity
YP_001668176.1	Catalyzes the conversion of citrate to isocitrate
YP_001668177.1	TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: pen:PSEEN1906 hypothetical protein
YP_001668178.1	functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C
YP_001668179.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_001668180.1	PFAM: protein of unknown function DUF1289; KEGG: pen:PSEEN1909 hypothetical protein
YP_001668181.1	TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: pen:PSEEN1910 6-pyruvoyl tetrahydrobiopterin synthase SscR
YP_001668183.1	KEGG: pen:PSEEN1911 hypothetical protein
YP_001668184.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: pen:PSEEN1912 hypothetical protein
YP_001668185.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: pen:PSEEN1913 hypothetical protein
YP_001668186.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN1914 DNA-binding response regulator
YP_001668187.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: pen:PSEEN1915 sensor histidine kinase
YP_001668188.1	PFAM: CBS domain containing protein; HPP family protein?; KEGG: pen:PSEEN1916 hypothetical protein
YP_001668189.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1917 transcriptional regulator, LysR family
YP_001668190.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pen:PSEEN1919 acetyl-CoA synthetase
YP_001668191.1	PFAM: AFG1-family ATPase; KEGG: pen:PSEEN1920 ATPase, AFG1 family
YP_001668192.1	KEGG: pfo:Pfl_3131 hypothetical protein
YP_001668193.1	KEGG: pen:PSEEN3403 sensory box histidine kinase/response regulator (hybrid); TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001668194.1	PFAM: response regulator receiver; KEGG: pen:PSEEN3402 response regulator
YP_001668195.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: pen:PSEEN3401 bacteriophytochrome 1
YP_001668196.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3400 type 1 pili protein CsuB
YP_001668197.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3399 type 1 pili subunit CsuA/B protein
YP_001668198.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3398 type 1 pili subunit CsuA/B protein
YP_001668199.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3397 type 1 pili subunit CsuA/B protein
YP_001668200.1	KEGG: pen:PSEEN3396 type 1 pili usher pathway chaperone CsuC
YP_001668201.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pen:PSEEN3395 type 1 pili usher protein CsuD
YP_001668202.1	PFAM: Spore coat U domain protein; KEGG: pen:PSEEN3394 type 1 pili protein CsuE
YP_001668203.1	PFAM: peptidase M14 carboxypeptidase A; KEGG: pen:PSEEN3393 zinc-dependent carboxypeptidase (M14 family)
YP_001668204.1	TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: pae:PA2595 putative sulfonate transport system substrate-binding protein
YP_001668205.1	KEGG: pae:PA2594 putative sulfonate transport system substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001668206.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: psa:PST_1310 AraC protein
YP_001668207.1	PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_2124 major facilitator superfamily MFS_1
YP_001668209.1	PFAM: VacJ family lipoprotein; KEGG: mag:amb0433 surface lipoprotein
YP_001668210.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_4997 DNA-binding response regulator
YP_001668211.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_4996 sensor histidine kinase
YP_001668212.1	PFAM: protein of unknown function DUF1348; KEGG: sit:TM1040_2246 protein of unknown function DUF1348
YP_001668213.1	KEGG: pfl:PFL_3034 hypothetical protein
YP_001668214.1	catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid
YP_001668215.1	PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN1194 hypothetical protein
YP_001668216.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN3408 hypothetical protein
YP_001668217.1	PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: pen:PSEEN3407 ferredoxin-nitrite reductase
YP_001668218.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pen:PSEEN3405 periplasmic sugar-binding protein
YP_001668219.1	KEGG: pen:PSEEN3404 hypothetical protein
YP_001668220.1	KEGG: pen:PSEEN2042 hypothetical protein
YP_001668221.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_001668222.1	PFAM: fatty acid cistrans isomerase; KEGG: pen:PSEEN3381 esterified fatty acid cis/trans isomerase
YP_001668223.1	PFAM: acyltransferase 3; KEGG: pen:PSEEN3380 acetyltransferase Act
YP_001668224.1	TIGRFAM: IscR-regulated protein YhgI; PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein; KEGG: pen:PSEEN3379 hypothetical protein
YP_001668225.1	PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN3378 hypothetical protein
YP_001668226.1	PFAM: protein of unknown function DUF461; KEGG: pen:PSEEN3377 hypothetical protein
YP_001668227.1	KEGG: pen:PSEEN3376 hypothetical protein
YP_001668228.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN3375 transcriptional regulator, AraC family
YP_001668229.1	PFAM: branched-chain amino acid transport; KEGG: pen:PSEEN3374 hypothetical protein
YP_001668230.1	PFAM: AzlC family protein; KEGG: pen:PSEEN3373 branched-chain amino acid transport protein, AzlC
YP_001668231.1	KEGG: pen:PSEEN3372 hypothetical protein
YP_001668232.1	KEGG: pen:PSEEN3371 hypothetical protein
YP_001668233.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3370 transporter, LysE family
YP_001668234.1	PFAM: Protein of unknown function YqcI/YcgG; KEGG: pen:PSEEN3369 hypothetical protein
YP_001668235.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3368 transcriptional regulator, LysR family
YP_001668236.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3367 transcriptional regulator, LysR family
YP_001668237.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3366 transporter, MFS family
YP_001668238.1	Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95oC
YP_001668239.1	SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN3358 hypothetical protein
YP_001668240.1	KEGG: pen:PSEEN3357 hypothetical protein
YP_001668241.1	KEGG: pen:PSEEN3356 hypothetical protein
YP_001668242.1	PFAM: protein of unknown function DUF692; KEGG: pen:PSEEN3355 hypothetical protein
YP_001668243.1	PFAM: DoxX family protein; KEGG: pen:PSEEN3339 hypothetical protein
YP_001668244.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2402 sensor histidine kinase
YP_001668245.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2403 two-component response regulator
YP_001668246.1	KEGG: pen:PSEEN2405 hypothetical protein
YP_001668247.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN2406 thioredoxin
YP_001668248.1	KEGG: pen:PSEEN2117 hypothetical protein
YP_001668249.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
YP_001668250.1	KEGG: pst:PSPTO_2036 lipoprotein, putative
YP_001668252.1	PFAM: 5-nucleotidase; KEGG: maq:Maqu_1307 5-nucleotidase
YP_001668255.1	PFAM: protein of unknown function DUF1543; KEGG: pfl:PFL_2512 hypothetical protein
YP_001668256.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: hne:HNE_1372 transcriptional regulator, LysR family
YP_001668257.1	PFAM: major facilitator superfamily MFS_1; KEGG: pmy:Pmen_1505 major facilitator superfamily MFS_1
YP_001668258.1	PFAM: Glutathione S-transferase domain; KEGG: asa:ASA_2515 glutathione S-transferase family protein
YP_001668259.1	KEGG: pen:PSEEN2128 hypothetical protein
YP_001668260.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mmw:Mmwyl1_2294 transcriptional regulator, LysR family
YP_001668261.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpt:Mpe_A3053 oxidoreductase
YP_001668262.1	PFAM: cyclase family protein; KEGG: pap:PSPA7_0926 cyclase family protein
YP_001668263.1	KEGG: pen:PSEEN0150 transcriptional factor-related protein
YP_001668264.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfo:Pfl_2437 zinc-containing alcohol dehydrogenase superfamily
YP_001668265.1	KEGG: reh:H16_A1692 hypothetical protein
YP_001668266.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfo:Pfl_3522 short-chain dehydrogenase/reductase SDR
YP_001668267.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_3524 transcriptional regulator, LysR family
YP_001668268.1	PFAM: aldo/keto reductase; KEGG: bch:Bcen2424_6070 aldo/keto reductase
YP_001668269.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_3898 transcriptional regulator, LysR family
YP_001668270.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfl:PFL_4138 metabolite-proton symporter
YP_001668271.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_001668272.1	PFAM: histone deacetylase superfamily; KEGG: pfo:Pfl_3895 histone deacetylase superfamily
YP_001668273.1	PFAM: S-type Pyocin domain protein; KEGG: pst:PSPTO_1035 colicin/pyosin nuclease family protein
YP_001668274.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN2394 transcriptional regulator, GntR family
YP_001668275.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN2395 gamma-aminobutyrate permease GabP-like
YP_001668277.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_001668278.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001668279.1	PFAM: outer membrane efflux protein; KEGG: pen:PSEEN2022 cobalt-zinc-cadmium resistance protein CzcC
YP_001668280.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2023 cobalt-zinc-cadmium resistance protein CzcB
YP_001668281.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2024 RND divalent metal cation efflux transporter CzcA
YP_001668282.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pst:PSPTO_3801 major facilitator family transporter
YP_001668283.1	KEGG: pfl:PFL_3586 hypothetical protein
YP_001668284.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN2377 TonB-dependent siderophore receptor
YP_001668285.1	KEGG: pen:PSEEN2378 hypothetical protein
YP_001668286.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pfl:PFL_0481 ParA family protein
YP_001668287.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN3185 diguanylate cyclase (GGDEF domain)
YP_001668288.1	KEGG: pen:PSEEN3184 hypothetical protein
YP_001668289.1	PFAM: GCN5-related N-acetyltransferase; KEGG: psb:Psyr_3098 GCN5-related N-acetyltransferase
YP_001668290.1	KEGG: pin:Ping_1187 hypothetical protein
YP_001668291.1	PFAM: outer membrane porin; KEGG: pen:PSEEN2388 porin, OprD family
YP_001668292.1	TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: pde:Pden_2983 pseudoazurin
YP_001668293.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psp:PSPPH_3008 iron ABC transporter, ATP-binding protein
YP_001668294.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: psp:PSPPH_3007 iron ABC transporter, permease protein, putative
YP_001668295.1	PFAM: periplasmic binding protein; KEGG: psp:PSPPH_3006 iron compound ABC transporter, periplasmic iron compound-binding protein
YP_001668296.1	KEGG: pen:PSEEN2389 hypothetical protein
YP_001668297.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN2012 outer membrane ferric siderophore receptor
YP_001668298.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN2134 acetyltransferase, GNAT family
YP_001668299.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pen:PSEEN2135 carboxymuconolactone decarboxylase
YP_001668300.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: pen:PSEEN2136 aspartyl/asparaginyl beta-hydroxylase
YP_001668301.1	TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: pen:PSEEN2137 2'-5' RNA ligase
YP_001668302.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mms:mma_3491 outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
YP_001668303.1	PFAM: FecR protein; KEGG: mms:mma_2023 Fe2+-dicitrate sensor, membrane component
YP_001668304.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_3271 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001668305.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pen:PSEEN2157 NAD(P)H dehydrogenase (quinone)
YP_001668306.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN2158 transcriptional regulator, TetR family
YP_001668307.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pfl:PFL_1817 transcriptional regulator, AraC family
YP_001668308.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfl:PFL_1816 oxidoreductase, zinc-binding
YP_001668309.1	KEGG: pen:PSEEN2301 hypothetical protein
YP_001668310.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2302 sugar exporter, MFS family
YP_001668311.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2303 transporter, LysE family
YP_001668312.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN2304 transcriptional regulator, AraC family
YP_001668313.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2306 transcriptional regulator, LysR family
YP_001668314.1	catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive
YP_001668315.1	PFAM: conserved hypothetical protein; KEGG: psa:PST_0247 hypothetical protein
YP_001668316.1	PFAM: RES domain protein; KEGG: rpb:RPB_4184 hypothetical protein
YP_001668317.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pen:PSEEN3349 cysteine desulfurase
YP_001668318.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3344 transcriptional regulator, LysR family
YP_001668319.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN3343 acyl-CoA dehydrogenase
YP_001668320.1	KEGG: pfo:Pfl_5213 hypothetical protein
YP_001668322.1	KEGG: pfo:Pfl_5213 hypothetical protein
YP_001668323.1	PFAM: Integral membrane protein TerC; KEGG: pen:PSEEN3035 hypothetical protein
YP_001668324.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN3030 periplamic phosphate-binding protein
YP_001668325.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN3041 polyamine ABC transporter, ATP binding protein
YP_001668326.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3040 polyamine ABC transporter, permease protein
YP_001668327.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3039 polyamine ABC transporter, permease protein
YP_001668328.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN3038 polyamine ABC transporter, periplasmic polyamine-binding protein
YP_001668329.1	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis
YP_001668330.1	PFAM: protein of unknown function DUF1330; KEGG: pen:PSEEN3036 hypothetical protein
YP_001668331.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pfo:Pfl_1969 esterase/lipase/thioesterase
YP_001668332.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1970 transcriptional regulator, LysR family
YP_001668333.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2702 cyclopropane-fatty-acyl-phospholipid synthase
YP_001668334.1	PFAM: protein of unknown function DUF1365; KEGG: pen:PSEEN2703 hypothetical protein
YP_001668335.1	PFAM: amine oxidase; KEGG: pen:PSEEN2704 hypothetical protein
YP_001668336.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN2705 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001668337.1	PFAM: protein of unknown function DUF1486; KEGG: pen:PSEEN2706 hypothetical protein
YP_001668338.1	KEGG: pmy:Pmen_3475 hypothetical protein
YP_001668339.1	PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: pmy:Pmen_3474 glycine cleavage T protein (aminomethyl transferase)
YP_001668340.1	PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: psb:Psyr_2223 sarcosine oxidase, delta subunit
YP_001668341.1	PFAM: FAD dependent oxidoreductase; KEGG: pmy:Pmen_3472 FAD dependent oxidoreductase
YP_001668342.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_001668343.1	TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: pmy:Pmen_3470 formyltetrahydrofolate deformylase
YP_001668344.1	KEGG: pen:PSEEN3331 hypothetical protein
YP_001668345.1	PFAM: MbtH domain protein; KEGG: pen:PSEEN3329 hypothetical protein
YP_001668346.1	PFAM: Thioesterase; KEGG: pen:PSEEN3328 thioesterase involved in non-ribosomal peptide biosynthesis
YP_001668347.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN3325 hydrolase, isochorismatase family
YP_001668348.1	PFAM: protein of unknown function DUF1615; KEGG: pen:PSEEN3324 hypothetical protein
YP_001668349.1	KEGG: pen:PSEEN3242 hypothetical protein
YP_001668350.1	PFAM: ABC-3 protein; KEGG: pen:PSEEN3241 cation ABC transporter, permease protein
YP_001668351.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3240 cation ABC transporter, ATP-binding protein
YP_001668352.1	PFAM: periplasmic solute binding protein; KEGG: pen:PSEEN3239 cation ABC transporter, periplasmic cation-binding protein
YP_001668353.1	KEGG: pen:PSEEN3238 hypothetical protein
YP_001668354.1	KEGG: pen:PSEEN3237 hypothetical protein
YP_001668355.1	KEGG: pen:PSEEN3236 hypothetical protein
YP_001668356.1	PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: pen:PSEEN3235 hypothetical protein
YP_001668357.1	KEGG: pen:PSEEN3223 L-ornithine N5-oxygenase PvdA
YP_001668358.1	KEGG: pen:PSEEN3219 hypothetical protein
YP_001668359.1	specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7
YP_001668360.1	KEGG: pen:PSEEN3601 transcriptional regulator CynR
YP_001668361.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN3288 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001668362.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bvi:Bcep1808_4018 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_001668363.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: pen:PSEEN5448 endoribonuclease L-PSP
YP_001668364.1	catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis
YP_001668366.1	PFAM: Alginate lyase 2; KEGG: pap:PSPA7_2458 alginate lyase superfamily
YP_001668367.1	PFAM: protein of unknown function DUF1654; KEGG: psp:PSPPH_2150 hypothetical protein
YP_001668368.1	PFAM: peptidase S24 and S26 domain protein; KEGG: psp:PSPPH_2151 prophage PSPPH03, transcriptional regulator, Cro/CI family
YP_001668369.1	KEGG: psp:PSPPH_0656 hypothetical protein
YP_001668370.1	KEGG: pen:PSEEN3216 hypothetical protein
YP_001668371.1	KEGG: pen:PSEEN3215 hypothetical protein
YP_001668372.1	catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_001668373.1	KEGG: pen:PSEEN3213 hypothetical protein
YP_001668374.1	KEGG: pen:PSEEN3212 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001668375.1	KEGG: pen:PSEEN3211 transcriptional regulator MvaT, P16 subunit
YP_001668376.1	PFAM: outer membrane porin; KEGG: pen:PSEEN3209 OprD-like porin
YP_001668377.1	catalyzes the formation of precorrin 6x from precorrin 5
YP_001668378.1	PFAM: response regulator receiver; KEGG: pen:PSEEN3207 response regulator
YP_001668379.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: pen:PSEEN3205 sensor histidine kinase/response regulator (hybrid)
YP_001668380.1	PFAM: MCP methyltransferase CheR-type; KEGG: pen:PSEEN3204 chemotaxis protein methyltransferase, CheR-like
YP_001668381.1	PFAM: CheB methylesterase; KEGG: pen:PSEEN3203 methylesterase, CheB-like
YP_001668382.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3202 response regulator/sensor histidine kinase (hybrid)
YP_001668383.1	PFAM: response regulator receiver; KEGG: pen:PSEEN3201 response regulator
YP_001668384.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN3199 transcriptional regulator, TetR family
YP_001668385.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pen:PSEEN3198 3-hydroxybutyryl-CoA dehydrogenase
YP_001668386.1	catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA
YP_001668387.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3196 transcriptional regulator, AraC family
YP_001668388.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pen:PSEEN3195 hypothetical protein
YP_001668389.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3193 transporter, MFS family
YP_001668390.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN3192 transcriptional regulator, GntR family
YP_001668391.1	KEGG: pen:PSEEN3191 hypothetical protein
YP_001668392.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: pen:PSEEN3190 NAD(P)H-flavin oxidoreductase
YP_001668393.1	PFAM: protein of unknown function DUF336; KEGG: pen:PSEEN3189 hypothetical protein
YP_001668394.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pen:PSEEN3188 glycolate oxidase subunit, FeS protein
YP_001668395.1	PFAM: FAD linked oxidase domain protein; KEGG: pen:PSEEN3187 glycolate oxidase, subunit GlcE
YP_001668396.1	TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein; KEGG: pen:PSEEN3186 glycolate oxidase, FAD-linked subunit
YP_001668397.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pau:PA14_70710 glc operon transcriptional activator
YP_001668398.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN2379 hypothetical protein
YP_001668399.1	PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pfo:Pfl_3918 sigma-54 specific transcriptional regulator, fis family
YP_001668400.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pfo:Pfl_3917 acyl-CoA dehydrogenase-like
YP_001668401.1	PFAM: NADPH-dependent FMN reductase; KEGG: pfo:Pfl_3915 FMN reductase
YP_001668402.1	KEGG: pen:PSEEN2489 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_001668403.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfl:PFL_3480 major facilitator family transporter
YP_001668404.1	PFAM: outer membrane porin; KEGG: pfl:PFL_3474 BenF-like porin
YP_001668405.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pfl:PFL_3473 transcriptional regulator VanR
YP_001668406.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: psp:PSPPH_2474 vanillate monooxygenase, oxidoreductase subunit
YP_001668407.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pfl:PFL_3471 vanillate O-demethylase, oxygenase subunit
YP_001668408.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_2026 ABC transporter-like
YP_001668409.1	PFAM: protein of unknown function DUF214; KEGG: pfl:PFL_2229 ABC transporter, permease protein, putative
YP_001668410.1	KEGG: pfl:PFL_2230 lipoprotein, putative
YP_001668411.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pfo:Pfl_4449 enoyl-CoA hydratase/isomerase
YP_001668412.1	PFAM: regulatory protein TetR; KEGG: pfl:PFL_2706 transcriptional regulator, TetR family
YP_001668413.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_2707 DNA-binding response regulator
YP_001668414.1	SMART: extracellular solute-binding protein family 3; KEGG: pfl:PFL_2708 periplasmic amino acid-binding protein-related protein
YP_001668415.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: pfl:PFL_2709 sensor histidine kinase/response regulator
YP_001668416.1	PFAM: amino acid permease-associated region; KEGG: pfl:PFL_2710 amino acid transporter, AAT family
YP_001668417.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pfl:PFL_2711 enoyl-CoA hydratase/isomerase family protein
YP_001668418.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pae:PA4979 probable acyl-CoA dehydrogenase
YP_001668419.1	KEGG: pfl:PFL_2713 acyl-CoA synthetase, putative
YP_001668420.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pap:PSPA7_5710 probable acetolactate synthase large subunit
YP_001668421.1	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer
YP_001668422.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: pae:PA4976 aspartate transaminase
YP_001668423.1	PFAM: Aldehyde Dehydrogenase; KEGG: cps:CPS_0387 aldehyde dehydrogenase family protein
YP_001668424.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pfl:PFL_2716 NAD(P)H dehydrogenase, quinone family
YP_001668425.1	PFAM: extracellular solute-binding protein family 1; KEGG: pfl:PFL_3466 putrescine ABC transporter, periplasmic putrescine-binding protein
YP_001668426.1	PFAM: aminotransferase class-III; KEGG: pfl:PFL_3467 hypothetical protein
YP_001668427.1	PFAM: regulatory protein LuxR; KEGG: pfl:PFL_3468 transcriptional regulator, LuxR family
YP_001668428.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: pmy:Pmen_2182 filamentation induced by cAMP protein Fic
YP_001668429.1	KEGG: pen:PSEEN2265 sensor box protein; TIGRFAM: PAS sensor protein; PFAM: helix-turn-helix domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001668430.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN2129 dioxygenase, beta subunit
YP_001668431.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pen:PSEEN2130 dioxygenase, alpha subunit
YP_001668432.1	member of the betaine, carnitine, choline transporter (BCCT) family; unknown function
YP_001668433.1	KEGG: pen:PSEEN2132 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_001668434.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2133 transcriptional regulator, LysR family
YP_001668435.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pfl:PFL_3639 transcriptional regulator, AsnC family
YP_001668436.1	PFAM: histone deacetylase superfamily; KEGG: pfl:PFL_3640 acetylpolyamine aminohydrolase
YP_001668437.1	PFAM: amino acid permease-associated region; KEGG: pfl:PFL_3642 D-serine/D-alanine/glycine transporter
YP_001668438.1	KEGG: ypi:YpsIP31758_2494 hypothetical protein
YP_001668439.1	KEGG: ypi:YpsIP31758_2493 hypothetical protein
YP_001668440.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pau:PA14_32200 transcriptional regulator CatR
YP_001668441.1	TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pen:PSEEN3138 muconate cycloisomerase I (cis,cis-muconate lactonizing enzyme I) (MLE)
YP_001668442.1	KEGG: pen:PSEEN3137 muconolactone delta-isomerase (MIase); TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase
YP_001668443.1	TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: pfo:Pfl_2961 intradiol ring-cleavage dioxygenase
YP_001668444.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: mmw:Mmwyl1_1823 acyl-CoA dehydrogenase type 2 domain
YP_001668445.1	KEGG: mmw:Mmwyl1_1824 hypothetical protein
YP_001668446.1	PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: mmw:Mmwyl1_1826 Rieske (2Fe-2S) domain protein
YP_001668447.1	PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: rpb:RPB_3896 aromatic-ring-hydroxylating dioxygenase, beta subunit
YP_001668448.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mmw:Mmwyl1_1828 short-chain dehydrogenase/reductase SDR
YP_001668449.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmw:Mmwyl1_1829 ferredoxin
YP_001668450.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: pfo:Pfl_0712 flavin reductase-like, FMN-binding
YP_001668451.1	PFAM: regulatory protein MarR; KEGG: mmw:Mmwyl1_1816 transcriptional regulator, MarR family
YP_001668452.1	PFAM: Amidase; KEGG: xau:Xaut_1052 amidase
YP_001668453.1	KEGG: mmw:Mmwyl1_1825 hypothetical protein
YP_001668454.1	KEGG: pen:PSEEN3112 hypothetical protein
YP_001668455.1	PFAM: cytochrome c class I; KEGG: rpe:RPE_3768 cytochrome c, class I
YP_001668456.1	activator of genes involved in phenylacetic acid catabolism
YP_001668457.1	KEGG: mpt:Mpe_A2652 hypothetical protein
YP_001668458.1	PFAM: methylamine dehydrogenase light chain domain protein; KEGG: pat:Patl_0157 twin-arginine translocation pathway signal
YP_001668459.1	TIGRFAM: methylamine dehydrogenase accessory protein MauD; PFAM: Redoxin domain protein; KEGG: bam:Bamb_4470 methylamine dehydrogenase accessory protein MauD
YP_001668460.1	PFAM: methylamine utilisation MauE; KEGG: azo:azo2259 putative methylamine utilization protein MauE
YP_001668461.1	PFAM: methylamine dehydrogenase heavy subunit; KEGG: bam:Bamb_4472 amine dehydrogenase
YP_001668462.1	PFAM: Aldehyde Dehydrogenase; KEGG: bte:BTH_II0330 phenylacetaldehyde dehydrogenase
YP_001668463.1	KEGG: pen:PSEEN2309 hypothetical protein
YP_001668464.1	KEGG: pen:PSEEN2310 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001668465.1	PFAM: aldo/keto reductase; KEGG: pfl:PFL_5394 oxidoreductase, aldo/keto reductase family
YP_001668466.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN2407 hypothetical protein
YP_001668467.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1962 transcriptional regulator, LysR family
YP_001668468.1	TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: pen:PSEEN2372 catalase; hydroperoxidase HPI(I)
YP_001668469.1	PFAM: creatinase; peptidase M24; KEGG: pfl:PFL_5299 creatinase
YP_001668470.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pde:Pden_1693 major facilitator superfamily MFS_1
YP_001668471.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pmy:Pmen_0490 transcriptional regulator, AraC family
YP_001668472.1	catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome
YP_001668473.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3353 hypothetical protein
YP_001668474.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3352 transcriptional regulator, LysR family
YP_001668475.1	KEGG: pap:PSPA7_3033 hypothetical protein
YP_001668476.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pfo:Pfl_2170 putative diguanylate cyclase (GGDEF domain)
YP_001668477.1	KEGG: psp:PSPPH_4839 hypothetical protein
YP_001668478.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN2055 decarboxylase
YP_001668479.1	PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A1977 conserved hypothetical protein 698
YP_001668480.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1978 transcriptional regulator, LysR family
YP_001668481.1	KEGG: ang:An14g06150 hypothetical protein Pfam: RHS_repeat UPF0126 PE D-aminoacyl_C
YP_001668482.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbr:BB1891 hypothetical protein
YP_001668483.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pmy:Pmen_3469 transcriptional regulator, XRE family
YP_001668484.1	TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: pmy:Pmen_3468 glutamine synthetase, catalytic region
YP_001668485.1	PFAM: glutamine amidotransferase class-II; KEGG: pmy:Pmen_3467 glutamine amidotransferase, class-II
YP_001668486.1	PFAM: glutamate synthase alpha subunit domain protein; KEGG: pmy:Pmen_3466 glutamate synthase, alpha subunit domain protein
YP_001668487.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; dihydroorotate dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: pmy:Pmen_3465 ferredoxin-dependent glutamate synthase
YP_001668488.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: pst:PSPTO_2586 ammonium transporter
YP_001668489.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN3342 transporter, NCS1 family
YP_001668490.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN3341 transcriptional regulator, AsnC family
YP_001668491.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3340 transporter, LysE family
YP_001668492.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2025 transporter, LysE family
YP_001668493.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2027 sensor histidine kinase/response regulator hybrid
YP_001668494.1	KEGG: xac:XAC1034 peptidyl-Asp metalloendopeptidase
YP_001668495.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN2028 hydrolase, MutT/NUDIX family
YP_001668496.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN2029 transcriptional regulator, GntR family
YP_001668497.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: pfo:Pfl_3235 carboxymuconolactone decarboxylase
YP_001668498.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: pen:PSEEN2031 oxidoreductase
YP_001668499.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN2032 aldehyde dehydrogenase
YP_001668500.1	PFAM: alpha/beta hydrolase fold; Ndr family protein; KEGG: pen:PSEEN2033 hydrolase, alpha/beta fold family
YP_001668501.1	PFAM: protein of unknown function DUF1185; KEGG: pen:PSEEN2034 hypothetical protein
YP_001668502.1	PFAM: luciferase family protein; KEGG: pen:PSEEN2035 monooxygenase, bacterial luciferase family
YP_001668503.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: pen:PSEEN2036 oxidoreductase
YP_001668504.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN2038 permease, cytosine/purines, uracil, thiamine, allantoin permease family
YP_001668505.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN2039 methyl-accepting chemotaxis transducer
YP_001668506.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN2040 pyridine nucleotide-disulphide oxidoreductase
YP_001668507.1	PFAM: flavin-containing monooxygenase FMO; KEGG: pmy:Pmen_3459 flavin-containing monooxygenase
YP_001668508.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pen:PSEEN2041 transcriptional regulator
YP_001668509.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN1921 transcriptional regulator, AraC family
YP_001668510.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pen:PSEEN1922 alkylhydroperoxidase, AhpD domain protein
YP_001668511.1	KEGG: pen:PSEEN1923 acyl-CoA dehydrogenase
YP_001668512.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1924 ABC transporter, ATP-binding protein
YP_001668513.1	KEGG: pen:PSEEN1925 ABC transporter, periplasmic binding protein
YP_001668514.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1926 ABC transporter, permease protein
YP_001668515.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN1928 acetyltransferase, GNAT family
YP_001668516.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_001668517.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1930 transcriptional regulator, LysR family
YP_001668518.1	TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: pen:PSEEN1931 4-oxalocrotonate tautomerase
YP_001668519.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN1932 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001668520.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1933 transcriptional regulator, LysR family
YP_001668521.1	KEGG: pen:PSEEN1934 hypothetical protein
YP_001668522.1	PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: pen:PSEEN1937 hypothetical protein
YP_001668523.1	PFAM: outer membrane porin; KEGG: pen:PSEEN2340 porin, OprD family
YP_001668524.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: pen:PSEEN2353 hypothetical protein
YP_001668525.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: nca:Noca_2609 choline/carnitine/betaine transporter
YP_001668527.1	PFAM: protein of unknown function DUF1289; KEGG: pen:PSEEN3298 hypothetical protein
YP_001668528.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2174 transporter, LysE family
YP_001668529.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN2979 hypothetical protein
YP_001668530.1	PFAM: protein of unknown function DUF182; KEGG: pen:PSEEN2169 hypothetical protein
YP_001668531.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN2170 cytochrome c
YP_001668532.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; KEGG: pen:PSEEN2171 isoquinoline 1-oxidoreductase, beta subunit
YP_001668533.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pen:PSEEN2172 isoquinoline 1-oxidoreductase, alpha subunit
YP_001668534.1	PFAM: OsmC family protein; protein of unknown function DUF181; KEGG: pen:PSEEN3294 hypothetical protein
YP_001668537.1	KEGG: pfo:Pfl_2311 hypothetical protein
YP_001668538.1	KEGG: pst:PSPTO_3688 hypothetical protein
YP_001668539.1	KEGG: psp:PSPPH_1743 L-sorbosone dehydrogenase
YP_001668540.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo2610 putative ferrichrome-iron TonB-dependent receptor
YP_001668541.1	KEGG: pen:PSEEN2168 hypothetical protein
YP_001668542.1	KEGG: dac:Daci_3654 hypothetical protein
YP_001668543.1	PFAM: protein of unknown function DUF606; KEGG: dac:Daci_4323 protein of unknown function DUF606
YP_001668544.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_4324 transcriptional regulator, LysR family
YP_001668545.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pfl:PFL_6147 YeeE/YedE family protein
YP_001668546.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dac:Daci_5626 alcohol dehydrogenase zinc-binding domain protein
YP_001668547.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pae:PA2681 probable transcriptional regulator
YP_001668548.1	KEGG: pen:PSEEN2652 hypothetical protein
YP_001668549.1	KEGG: pen:PSEEN2653 hypothetical protein
YP_001668550.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN2654 transcriptional regulator, GntR family
YP_001668551.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN2655 ketoglutarate semialdehyde dehydrogenase
YP_001668552.1	KEGG: pen:PSEEN2656 D-galactarate dehydrogenase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein
YP_001668553.1	TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2657 D-galactonate permease
YP_001668554.1	catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate
YP_001668555.1	PFAM: peptidase C26; KEGG: pen:PSEEN2659 glutamine amidopeptidase (class I)
YP_001668556.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN2663 amino acid ABC transporter, ATP-binding protein
YP_001668557.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2664 D-amino acid dehydrogenase, small subunit family protein
YP_001668558.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN2665 amino acid ABC transporter, permease protein
YP_001668559.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN2666 amino acid ABC transporter, permease protein
YP_001668560.1	PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN2667 amino acid ABC transporter, periplasmic binding protein
YP_001668561.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pen:PSEEN2668 transcriptional regulator, RpiR family
YP_001668562.1	PFAM: Malate/L-lactate dehydrogenase; KEGG: pen:PSEEN2669 malate dehydrogenase
YP_001668563.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_001668564.1	PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: pen:PSEEN2671 serine transport protein
YP_001668565.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN2672 thiol peroxidase
YP_001668566.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: pen:PSEEN2673 multidrug resistance efflux pump; membrane fusion protein
YP_001668567.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2674 multidrug resistance efflux transporter
YP_001668568.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2675 multidrug resistance efflux pump
YP_001668569.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN2676 outer membrane protein precursor
YP_001668570.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: pen:PSEEN2858 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains)
YP_001668571.1	PFAM: protein of unknown function DUF1652; KEGG: pfl:PFL_3228 hypothetical protein
YP_001668572.1	PFAM: protein of unknown function DUF1345; KEGG: pen:PSEEN3002 hypothetical protein
YP_001668573.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_001668574.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: psb:Psyr_2580 sigma-70 region 2
YP_001668575.1	PFAM: FecR protein; KEGG: psp:PSPPH_2748 PupR protein
YP_001668576.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: psp:PSPPH_2749 outer membrane ferric siderophore receptor
YP_001668577.1	KEGG: pen:PSEEN1853 hypothetical protein
YP_001668578.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_1436 transcriptional regulator, LysR family
YP_001668579.1	PFAM: amidohydrolase 2; KEGG: pna:Pnap_1548 amidohydrolase 2
YP_001668580.1	PFAM: major facilitator superfamily MFS_1; KEGG: bpd:BURPS668_A0581 probable glucarate transporter
YP_001668581.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_0784 short-chain dehydrogenase/reductase SDR
YP_001668582.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bja:bll6916 hypothetical protein
YP_001668583.1	PFAM: Endoribonuclease L-PSP; KEGG: pen:PSEEN2647 hypothetical protein
YP_001668584.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2648 oxidoreductase, PNDR family (class II)
YP_001668585.1	PFAM: protein of unknown function DUF1028; KEGG: pen:PSEEN2649 hypothetical protein
YP_001668586.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine
YP_001668587.1	PFAM: Carbohydrate-selective porin OprB; KEGG: pfo:Pfl_2711 carbohydrate-selective porin OprB
YP_001668588.1	TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: pen:PSEEN2918 quinate dehydrogenase (pyrroloquinoline-quinone)
YP_001668589.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2914 hypothetical protein
YP_001668590.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2913 transcriptional regulator, LysR family
YP_001668591.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2912 transporter, MFS superfamily
YP_001668592.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2911 transporter, LysE family
YP_001668593.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pen:PSEEN2910 transcriptional regulator, AraC family
YP_001668594.1	PFAM: SCP-like extracellular; KEGG: pen:PSEEN2909 hypothetical protein
YP_001668595.1	PFAM: cell wall hydrolase SleB; KEGG: pen:PSEEN2908 hypothetical protein
YP_001668596.1	PFAM: Auxin Efflux Carrier; KEGG: pen:PSEEN2907 hypothetical protein
YP_001668597.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2455 transcriptional regulator, LysR family
YP_001668598.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN2456 amino acid transporter permease protein
YP_001668599.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pen:PSEEN2457 amino acid transporter, periplasmic amino acid-binding protein
YP_001668600.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: plu:plu2820 hypothetical protein
YP_001668601.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN2997 methyl-accepting chemotaxis transducer
YP_001668602.1	PFAM: Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pen:PSEEN2996 Na+/H+ antiporter, NahC family
YP_001668603.1	PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family
YP_001668604.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pmy:Pmen_3819 acyl-CoA dehydrogenase domain protein
YP_001668605.1	activates fatty acids by binding to coenzyme A
YP_001668606.1	KEGG: pmy:Pmen_3816 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001668607.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pmy:Pmen_3815 response regulator receiver protein
YP_001668608.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN2994 transcriptional regulator, MarR family
YP_001668609.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2993 HlyD family secretion protein
YP_001668610.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2992 drug resistance transporter, EmrB/QacA family
YP_001668611.1	KEGG: smg:SMGWSS_010 putative ribosomal protein S1
YP_001668612.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN2990 oxidoreductase, short chain dehydrogenase/reductase family
YP_001668613.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: pen:PSEEN2989 sensory box histidine kinase/response regulator (hybrid)
YP_001668614.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: pen:PSEEN2989 sensory box histidine kinase/response regulator (hybrid)
YP_001668615.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN2988 transcriptional regulator, GntR family
YP_001668616.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pen:PSEEN2987 iron-sulfur cluster-binding protein
YP_001668617.1	KEGG: pfl:PFL_2870 hypothetical protein
YP_001668618.1	PFAM: MgtC/SapB transporter; KEGG: pen:PSEEN2986 transporter, MgtC family
YP_001668619.1	catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA
YP_001668620.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN2982 transcriptional regulator, MerR family
YP_001668621.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN3049 transcriptional regulator PobR
YP_001668622.1	catalyzes the formation of protocatechuate from 4-hydroxybenzoate
YP_001668623.1	PFAM: Ankyrin; KEGG: reh:H16_B0798 ankyrin repeat protein containing four repeats
YP_001668624.1	KEGG: pfl:PFL_5184 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001668625.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3046 transcriptional regulator, LysR family
YP_001668626.1	KEGG: rso:RS00362 hypothetical protein
YP_001668627.1	catalyzes the formation of L-proline from L-ornithine
YP_001668628.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: rme:Rmet_5648 transcriptional regulator, AsnC family
YP_001668629.1	PFAM: amino acid permease-associated region; KEGG: pfl:PFL_3642 D-serine/D-alanine/glycine transporter
YP_001668630.1	PFAM: lipid-binding START domain protein; KEGG: pen:PSEEN2926 hypothetical protein
YP_001668631.1	TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2925 hypothetical protein
YP_001668632.1	KEGG: bte:BTH_II1741 monoxygenase
YP_001668633.1	KEGG: mms:mma_3465 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001668634.1	KEGG: pen:PSEEN2922 hypothetical protein
YP_001668635.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mlo:mlr2632 hypothetical protein
YP_001668636.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN2015 transcriptional regulator, TetR family
YP_001668637.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN2335 transcriptional regulator, AraC family
YP_001668638.1	KEGG: pen:PSEEN2759 hypothetical protein
YP_001668640.1	PFAM: Endoribonuclease L-PSP; KEGG: pen:PSEEN2338 hypothetical protein
YP_001668641.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pmy:Pmen_1087 protein of unknown function DUF6, transmembrane
YP_001668642.1	KEGG: pfo:Pfl_1444 hypothetical protein
YP_001668643.1	KEGG: pen:PSEEN3318 lipoprotein
YP_001668644.1	KEGG: smd:Smed_5191 hypothetical protein
YP_001668645.1	KEGG: pfo:Pfl_1376 hypothetical protein
YP_001668646.1	KEGG: pfo:Pfl_1375 hypothetical protein
YP_001668647.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_2731 transcriptional regulator, AraC family
YP_001668648.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: pfl:PFL_2732 hydantoin utilization protein A
YP_001668649.1	PFAM: Hydantoinase B/oxoprolinase; KEGG: pfl:PFL_2733 hydantoin utilization protein B
YP_001668650.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE1223 putative LysR-family transcriptional regulatory protein
YP_001668651.1	PFAM: transmembrane pair domain protein; KEGG: spe:Spro_3410 transmembrane pair domain protein
YP_001668652.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_001668653.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_46010 putative ATP-binding component of ABC transporter
YP_001668654.1	KEGG: pen:PSEEN2091 hypothetical protein
YP_001668655.1	KEGG: pen:PSEEN2092 hypothetical protein
YP_001668656.1	TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pen:PSEEN2432 cobalamin biosynthesis protein CobW
YP_001668657.1	with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism
YP_001668658.1	KEGG: pen:PSEEN2434 magnesium chelatase, subunit ChII; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001668659.1	KEGG: pen:PSEEN2435 hypothetical protein
YP_001668660.1	KEGG: pen:PSEEN2436 hypothetical protein
YP_001668661.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: pen:PSEEN2438 sigma-54 dependent transcriptional regulator
YP_001668662.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN3125 multidrug efflux RND membrane fusion protein MexC
YP_001668663.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN3124 multidrug efflux pump MexD (RND family)
YP_001668664.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN3123 outer membrane protein OprJ precursor
YP_001668665.1	PFAM: regulatory protein LacI; KEGG: pen:PSEEN3061 transcriptional regulator NfxB
YP_001668666.1	PFAM: peptidase U32; KEGG: pen:PSEEN3060 peptidase, U32 family
YP_001668667.1	PFAM: Endoribonuclease L-PSP; KEGG: pen:PSEEN2383 endoribonuclease, L-PSP family
YP_001668668.1	PFAM: protein of unknown function DUF633; KEGG: pen:PSEEN2384 hypothetical protein
YP_001668669.1	KEGG: pen:PSEEN2386 hypothetical protein
YP_001668670.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2387 transcriptional regulator, LysR family
YP_001668671.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN2889 acyl-CoA dehydrogenase
YP_001668672.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pen:PSEEN2888 enoyl-CoA hydratase
YP_001668673.1	TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: psa:PST_4120 malonate decarboxylase alpha subunit
YP_001668674.1	catalyzes the reversible formation of 2'-(5''-triphosphoribosyl)-3'dephospho-CoA from 3-dephospho-CoA
YP_001668675.1	acyl carrier protein of malonate decarboxylase
YP_001668676.1	The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A
YP_001668677.1	TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: psa:PST_4116 malonate decarboxylase gamma subunit
YP_001668678.1	Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein
YP_001668679.1	TIGRFAM: malonate decarboxylase, epsilon subunit; PFAM: Acyl transferase; KEGG: psa:PST_4114 malonyl CoA-acyl carrier protein transacylase
YP_001668680.1	TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: pfl:PFL_5813 malonate transporter, MadL subunit
YP_001668681.1	TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: pfl:PFL_5812 malonate transporter, MadM subunit
YP_001668682.1	KEGG: pen:PSEEN2857 hypothetical protein
YP_001668683.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: pen:PSEEN2854 hypothetical protein
YP_001668684.1	PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN2853 Sco1/SenC family protein
YP_001668685.1	PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN2852 SCO1/SenC family protein
YP_001668686.1	KEGG: pen:PSEEN2851 cytochrome c
YP_001668687.1	PFAM: SurA domain; KEGG: pen:PSEEN2850 hypothetical protein
YP_001668688.1	PFAM: response regulator receiver; KEGG: pen:PSEEN2849 response regulator
YP_001668689.1	PFAM: type II secretion system protein E; KEGG: pen:PSEEN2848 type II secretion system protein E
YP_001668690.1	KEGG: pen:PSEEN2847 hypothetical protein
YP_001668691.1	KEGG: pen:PSEEN2846 hypothetical protein
YP_001668692.1	KEGG: pen:PSEEN2845 hypothetical protein
YP_001668693.1	KEGG: pen:PSEEN2844 hypothetical protein
YP_001668694.1	PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; Tetratricopeptide TPR_2 repeat protein; KEGG: pen:PSEEN2843 secretion type II protein related to GspD (secretin) protein
YP_001668695.1	related to protein G. signal peptide; KEGG: pen:PSEEN2842 secretion type II protein related to protein G. signal peptide
YP_001668696.1	PFAM: type II secretion system protein G; KEGG: pen:PSEEN2841 secretion protein
YP_001668697.1	KEGG: pen:PSEEN2840 hypothetical protein
YP_001668698.1	chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex
YP_001668699.1	KEGG: pen:PSEEN2838 curli production assembly/transport component CsgF precursor
YP_001668700.1	PFAM: Curli production assembly/transport component CsgG; KEGG: pen:PSEEN2837 curli production assembly/transport component CsgG precursor
YP_001668701.1	KEGG: psb:Psyr_4870 hypothetical protein
YP_001668703.1	KEGG: pen:PSEEN1832 hypothetical protein
YP_001668704.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase; KEGG: pen:PSEEN2820 sigma-54 dependent transcriptional regulator
YP_001668705.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN2819 ABC efflux transporter, permease/ATP-binding protein
YP_001668706.1	KEGG: pen:PSEEN2818 hypothetical protein
YP_001668707.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pen:PSEEN2817 hypothetical protein
YP_001668708.1	KEGG: pen:PSEEN3112 hypothetical protein
YP_001668709.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN2978 NAD-dependent aldehyde dehydrogenase
YP_001668710.1	PFAM: Quinohemoprotein amine dehydrogenase A alpha subunit haem binding; Domain of unknown function DUF1927; Domain of unknown function DUF1928; KEGG: pen:PSEEN2977 quinohemoprotein amine dehydrogenase 60 kDa subunit
YP_001668711.1	PFAM: Radical SAM domain protein; KEGG: pen:PSEEN2976 hypothetical protein
YP_001668712.1	PFAM: Quinohemoprotein amine dehydrogenase gamma subunit; KEGG: pen:PSEEN2975 quinohemoprotein amine dehydrogenase gamma subunit
YP_001668713.1	KEGG: pen:PSEEN2974 quinohemoprotein amine dehydrogenase 40 kDa subunit
YP_001668714.1	activates fatty acids by binding to coenzyme A
YP_001668715.1	in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis
YP_001668716.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2971 multidrug/solvent RND transporter, AcrB-like
YP_001668717.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2970 multidrug efflux RND membrane fusion protein
YP_001668718.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2969 response regulator
YP_001668719.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2968 sensor histidine kinase
YP_001668720.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN2967 diguanylate cyclase (GGDEF domain)
YP_001668721.1	KEGG: pen:PSEEN2966 hypothetical protein
YP_001668722.1	KEGG: pen:PSEEN2965 hypothetical protein
YP_001668723.1	PFAM: General secretory system II protein E domain protein; KEGG: pen:PSEEN2964 bacteriophage receptor protein NfrB
YP_001668724.1	PFAM: transmembrane pair domain protein; KEGG: pen:PSEEN2961 hypothetical protein
YP_001668725.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_001668726.1	KEGG: pen:PSEEN2958 hypothetical protein
YP_001668727.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN2957 hypothetical protein
YP_001668728.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN2956 NAD-dependent aldehyde dehydrogenase
YP_001668729.1	KEGG: pen:PSEEN2953 hypothetical protein
YP_001668730.1	KEGG: pen:PSEEN2952 hypothetical protein
YP_001668731.1	KEGG: pen:PSEEN2951 hypothetical protein
YP_001668732.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pfo:Pfl_2165 transcriptional regulator, AraC family
YP_001668733.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pfl:PFL_3318 efflux protein, LysE family
YP_001668734.1	PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: pen:PSEEN3059 hypothetical protein
YP_001668735.1	TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: pen:PSEEN3058 chloramphenicol-sensitive protein RarD
YP_001668736.1	PFAM: EAL domain protein; KEGG: pen:PSEEN3057 phosphodiesterase (EAL domain)
YP_001668737.1	KEGG: pen:PSEEN3054 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase); TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001668738.1	KEGG: pen:PSEEN3057 phosphodiesterase (EAL domain)
YP_001668739.1	PFAM: ThiJ/PfpI domain protein; KEGG: pen:PSEEN3053 hypothetical protein
YP_001668740.1	KEGG: pen:PSEEN3051 sensory box histidine kinase/response regulator (hybrid); TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001668741.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_3246 sensor histidine kinase/response regulator
YP_001668742.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pen:PSEEN3050 hypothetical protein
YP_001668743.1	PFAM: regulatory protein TetR; KEGG: eca:ECA1819 TetR-family transcriptional regulator
YP_001668744.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN2311 multidrug efflux RND outer membrane protein OprN
YP_001668745.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN2312 acridine efflux pump (RND family)
YP_001668746.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN2313 multidrug efflux RND membrane fusion protein MexE
YP_001668747.1	PFAM: Rhodanese domain protein; KEGG: pae:PA2603 probable thiosulfate sulfurtransferase
YP_001668748.1	PFAM: cysteine dioxygenase type I; KEGG: pfl:PFL_1375 hypothetical protein
YP_001668749.1	TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: psb:Psyr_3606 ABC transporter, substrate-binding protein, aliphatic sulphonates
YP_001668750.1	KEGG: rha:RHA1_ro01764 probable nitrilotriacetate monooxygenase, component A
YP_001668751.1	PFAM: type II secretion system protein; KEGG: pen:PSEEN2459 type II secretion pathway protein F
YP_001668752.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: pen:PSEEN2460 probable type II secretion system protein G
YP_001668753.1	PFAM: Lytic transglycosylase catalytic; KEGG: pen:PSEEN2461 lytic transglycosylase
YP_001668754.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2416 sensor histidine kinase
YP_001668755.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2417 sensor histidine kinase
YP_001668756.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN2418 sigma-54 dependent transcriptional regulator, fis family/response regulator
YP_001668757.1	KEGG: pen:PSEEN2419 hypothetical protein
YP_001668758.1	TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: pen:PSEEN2420 gluconate permease (GntP family)
YP_001668759.1	TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: pen:PSEEN2421 gluconokinase
YP_001668760.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pen:PSEEN2422 transcriptional regulator, LacI family
YP_001668761.1	KEGG: pen:PSEEN2423 methyl-accepting chemotaxis transducer/sensory box protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001668762.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN2424 sensor histidine kinase/response regulator
YP_001668763.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN2425 DNA-binding response regulator, LuxR family
YP_001668764.1	PFAM: protein of unknown function DUF1272; KEGG: pen:PSEEN2426 hypothetical protein
YP_001668765.1	TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pen:PSEEN2427 precorrin-4 C11-methyltransferase
YP_001668766.1	KEGG: pen:PSEEN2428 cobalamin biosynthesis protein CobE
YP_001668767.1	TIGRFAM: cobalt transporter, subunit CbtA; PFAM: Cobalt transporter subunit CbtA putative; KEGG: pen:PSEEN2429 cobalt transporter subunit CbtA
YP_001668768.1	TIGRFAM: cobalt transporter, subunit CbtB; PFAM: Cobalt transporter subunit CbtB putative; KEGG: pen:PSEEN2431 hypothetical protein
YP_001668769.1	PFAM: luciferase family protein; KEGG: bur:Bcep18194_B1755 alkanesulfonate monooxygenase
YP_001668770.1	KEGG: psb:Psyr_2211 monooxygenase, NtaA/SnaA/SoxA family
YP_001668771.1	PFAM: class II aldolase/adducin family protein; KEGG: pst:PSPTO_2487 hypothetical protein
YP_001668772.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pst:PSPTO_2424 D-isomer specific 2-hydroxyacid dehydrogenase family protein
YP_001668773.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pst:PSPTO_1790 acyl-CoA dehydrogenase family protein
YP_001668774.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_1376 transcriptional regulator, LysR family
YP_001668775.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN2001 acetyltransferase, GNAT family
YP_001668776.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2002 transporter, LysE family
YP_001668777.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN2003 hydrolase, alpha/beta fold family
YP_001668778.1	KEGG: scl:sce1298 hypothetical protein
YP_001668779.1	PFAM: Pirin domain protein; KEGG: pen:PSEEN2646 hypothetical protein
YP_001668780.1	PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: pfl:PFL_4632 DNA-3-methyladenine glycosylase II
YP_001668781.1	PFAM: protein of unknown function DUF1652; KEGG: pen:PSEEN2104 hypothetical protein
YP_001668782.1	PFAM: protein of unknown function DUF1282; KEGG: pfo:Pfl_2694 protein of unknown function DUF1282
YP_001668783.1	KEGG: pen:PSEEN2105 hypothetical protein
YP_001668784.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: pen:PSEEN2825 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions, repair of alkylated DNA
YP_001668785.1	PFAM: Curlin associated repeat protein; KEGG: pen:PSEEN2824 curlin; signal peptide
YP_001668786.1	PFAM: Curlin associated repeat protein; KEGG: pen:PSEEN2823 curli fiber surface-exposed nucleator CsgB
YP_001668787.1	KEGG: pen:PSEEN2822 hypothetical protein
YP_001668788.1	KEGG: pen:PSEEN2821 hypothetical protein
YP_001668789.1	KEGG: csa:Csal_2244 hypothetical protein
YP_001668790.1	KEGG: csa:Csal_0206 hypothetical protein
YP_001668791.1	KEGG: csa:Csal_0205 hypothetical protein
YP_001668792.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: pae:PA0262 hypothetical protein
YP_001668793.1	KEGG: vco:VC0395_0022 hypothetical protein
YP_001668794.1	KEGG: pen:PSEEN2686 hypothetical protein
YP_001668795.1	PFAM: Phosphoglycerate mutase; KEGG: pen:PSEEN2687 hypothetical protein
YP_001668796.1	KEGG: pfl:PFL_0053 hypothetical protein
YP_001668797.1	PFAM: glucose-methanol-choline oxidoreductase; KEGG: pfo:Pfl_0085 glucose-methanol-choline oxidoreductase
YP_001668798.1	PFAM: cytochrome c class I; KEGG: pfl:PFL_0055 cytochrome c family protein
YP_001668799.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pau:PA14_35370 transcriptional regulator PtxS
YP_001668800.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pau:PA14_35360 putative epimerase
YP_001668801.1	PFAM: PfkB domain protein; KEGG: pae:PA2261 probable 2-ketogluconate kinase
YP_001668802.1	PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_35330 putative 2-ketogluconate transporter
YP_001668803.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pau:PA14_35320 2-ketogluconate 6-phosphate reductase
YP_001668804.1	PFAM: Endonuclease I; KEGG: plu:plu2037 hypothetical protein
YP_001668805.1	KEGG: psb:Psyr_3795 hypothetical protein
YP_001668806.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: psp:PSPPH_1459 outer membrane protein, OMP85 family
YP_001668807.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_3793 response regulator receiver:transcriptional regulatory protein, C-terminal
YP_001668808.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: psb:Psyr_3792 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal
YP_001668809.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pfl:PFL_4037 transcriptional regulator, AsnC family
YP_001668810.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_001668811.1	catalyzes the formation of pyruvate from 2,3-diaminopropionate
YP_001668812.1	PFAM: major facilitator superfamily MFS_1; KEGG: psa:PST_2918 major facilitator family transporter
YP_001668813.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: hch:HCH_01492 transcriptional regulator
YP_001668814.1	PFAM: FAD dependent oxidoreductase; KEGG: bpt:Bpet3491 putative oxidoreductase
YP_001668815.1	PFAM: extracellular solute-binding protein family 3; KEGG: ret:RHE_PF00192 probable amino acid ABC transporter, substrate-binding protein
YP_001668816.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vco:VC0395_A0972 amino acid ABC transporter, ATP-binding protein
YP_001668817.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PF00191 probable amino acid ABC transporter, permease protein
YP_001668818.1	KEGG: reh:H16_B1854 putative hydrolase alpha/beta fold
YP_001668819.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vvu:VV1_2777 transcriptional regulator
YP_001668820.1	catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis
YP_001668821.1	PFAM: response regulator receiver; GAF domain protein; HWE histidine kinase; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: atc:AGR_C_3927 hypothetical protein
YP_001668822.1	PFAM: amino acid permease-associated region; KEGG: pap:PSPA7_1544 probable amino acid permease
YP_001668823.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pap:PSPA7_1543 hypothetical protein
YP_001668824.1	PFAM: regulatory protein LuxR; KEGG: pau:PA14_17720 putative transcriptional regulator, LuxR family
YP_001668825.1	PFAM: regulatory protein LuxR; KEGG: pau:PA14_45250 putative transcriptional regulator
YP_001668826.1	PFAM: amino acid permease-associated region; KEGG: pau:PA14_45240 putative amino acid permease
YP_001668827.1	PFAM: peptidase S58 DmpA; KEGG: pae:PA1486 hypothetical protein
YP_001668828.1	KEGG: eca:ECA1481 hypothetical protein
YP_001668829.1	PFAM: Calcium/calmodulin dependent protein kinase II association-domain protein; KEGG: pde:Pden_1337 hypothetical protein
YP_001668830.1	TIGRFAM: RNA polymerase-binding protein DksA; KEGG: pfl:PFL_6174 RNA polymerase-binding protein DksA, putative
YP_001668831.1	PFAM: protein of unknown function DUF347; KEGG: pfl:PFL_4648 hypothetical protein
YP_001668832.1	KEGG: bvi:Bcep1808_7222 conserved hypothetical signal peptide protein
YP_001668833.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rme:Rmet_4978 two component transcriptional regulator, winged helix family
YP_001668834.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dar:Daro_2297 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal
YP_001668835.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pfl:PFL_2362 transcriptional regulator, AsnC family
YP_001668836.1	PFAM: aminoglycoside phosphotransferase; peptidase M23B; aminotransferase class-III; KEGG: pfl:PFL_2361 hypothetical protein
YP_001668837.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pfl:PFL_2362 transcriptional regulator, AsnC family
YP_001668838.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pfl:PFL_2360 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001668839.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_2359 amino acid ABC transporter, permease protein
YP_001668840.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_2358 amino acid ABC transporter
YP_001668841.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2357 glutamine ABC transporter, ATP-binding protein
YP_001668842.1	KEGG: ctc:CTC02318 histidine ammonia-lyase
YP_001668843.1	KEGG: mxa:MXAN_3465 histidine ammonia-lyase
YP_001668844.1	TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: pau:PA14_20890 ADP-L-glycero-D-mannoheptose 6-epimerase
YP_001668845.1	TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein; PaaX domain protein domain; KEGG: pen:PSEEN2789 transcriptional repressor for phenylacetic acid degradation
YP_001668846.1	TIGRFAM: phenylacetic acid degradation protein PaaY; PFAM: transferase hexapeptide repeat containing protein; KEGG: pen:PSEEN2790 regulatory PhaM protein
YP_001668847.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pen:PSEEN2791 enoyl-CoA hydratase/isomerase PhaA
YP_001668848.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001668849.1	converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation
YP_001668850.1	TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN2794 phenylacetic acid degradation protein
YP_001668851.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
YP_001668852.1	TIGRFAM: phenylacetate-CoA ligase; KEGG: pen:PSEEN2796 phenylacetyl-CoA ligase
YP_001668853.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA
YP_001668854.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation
YP_001668855.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: pen:PSEEN2800 phenylacetic acid degradation, subunit of multicomponent oxygenase
YP_001668856.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: pen:PSEEN2801 ring-hydroxylation complex protein 3
YP_001668857.1	TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN2802 ring-hydroxylation complex protein 4
YP_001668858.1	PFAM: protein of unknown function DUF485; KEGG: pen:PSEEN2803 hypothetical protein
YP_001668859.1	member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake
YP_001668860.1	PFAM: outer membrane porin; KEGG: pen:PSEEN2805 phenylacetic acid-specific porin
YP_001668861.1	catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA
YP_001668862.1	KEGG: pen:PSEEN3076 hypothetical protein
YP_001668863.1	KEGG: pmy:Pmen_2359 hypothetical protein
YP_001668864.1	PFAM: peptidase S14 ClpP; KEGG: pen:PSEEN3077 clp protease (protease subunit)
YP_001668865.1	PFAM: protein of unknown function DUF1452; KEGG: pen:PSEEN3078 hypothetical protein
YP_001668866.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pen:PSEEN3079 DNase with DNase I-like domain
YP_001668867.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: pen:PSEEN3080 phospholipase (biosynthetic)
YP_001668868.1	KEGG: pen:PSEEN3081 hypothetical protein
YP_001668869.1	KEGG: pen:PSEEN2768 hypothetical protein
YP_001668870.1	catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_001668871.1	KEGG: pen:PSEEN2765 acyl-CoA dehydrogenase
YP_001668872.1	PFAM: LmbE family protein; KEGG: pen:PSEEN2764 hypothetical protein
YP_001668873.1	PFAM: NodS family protein; Methyltransferase type 12; KEGG: pen:PSEEN2763 methyltransferase
YP_001668874.1	PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN2762 glycosyl transferase, group 2 family protein
YP_001668875.1	TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: pen:PSEEN2761 Ku protein
YP_001668876.1	KEGG: fjo:Fjoh_3241 nucleoside phosphorylase-like protein
YP_001668877.1	KEGG: pen:PSEEN3087 hypothetical protein
YP_001668878.1	PFAM: major facilitator superfamily MFS_1; KEGG: mfa:Mfla_1799 major facilitator superfamily MFS_1
YP_001668879.1	PFAM: aldo/keto reductase; KEGG: mfa:Mfla_1798 twin-arginine translocation pathway signal
YP_001668880.1	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: pen:PSEEN3113 Dyp-type peroxidase
YP_001668881.1	PFAM: Bile acid:sodium symporter; KEGG: pen:PSEEN3114 transporter, bile acid/Na+ symporter family
YP_001668882.1	PFAM: fatty acid hydroxylase; KEGG: pen:PSEEN3115 beta-carotene hydroxylase
YP_001668883.1	PFAM: MgtC/SapB transporter; KEGG: pen:PSEEN3117 magnesium transporter, MgtC family
YP_001668884.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN3121 acetyltransferase, GNAT family
YP_001668885.1	KEGG: pen:PSEEN2808 Tn4652 cointegrate resolution protein T
YP_001668886.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: psa:PST_3570 cytosine deaminase
YP_001668887.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bte:BTH_II1641 cytosine permease
YP_001668888.1	PFAM: class II aldolase/adducin family protein; KEGG: pfl:PFL_1381 hypothetical protein
YP_001668889.1	KEGG: pfl:PFL_1382 ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family, putative
YP_001668890.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: psp:PSPPH_2892 TonB-dependent siderophore receptor, putative
YP_001668891.1	KEGG: pfl:PFL_1391 monooxygenase, NtaA/SnaA/SoxA family
YP_001668892.1	PFAM: extracellular solute-binding protein family 5; KEGG: kra:Krad_0939 extracellular solute-binding protein family 5
YP_001668893.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_0940 binding-protein-dependent transport systems inner membrane component
YP_001668894.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_0941 binding-protein-dependent transport systems inner membrane component
YP_001668895.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: nfa:nfa17450 putative ABC transporter ATP-binding protein
YP_001668896.1	PFAM: TENA/THI-4 domain protein; KEGG: nwi:Nwi_0858 TenA/THI-4 protein
YP_001668897.1	PFAM: TENA/THI-4 domain protein; KEGG: pde:Pden_3673 transcriptional activator, TenA family
YP_001668898.1	PFAM: multicopper oxidase type 2; KEGG: pen:PSEEN2124 hypothetical protein
YP_001668899.1	PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN2123 electron transporter, SCO1/SenC family protein/cytochrome c
YP_001668900.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pen:PSEEN2876 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains)
YP_001668901.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: pen:PSEEN2877 phosphonate-binding periplasmic protein
YP_001668902.1	PFAM: integrase family protein; KEGG: pap:PSPA7_3058 cointegrate resolution protein S
YP_001668903.1	PFAM: short-chain dehydrogenase/reductase SDR; SMP-30/Gluconolaconase/LRE domain protein; KR domain protein; KEGG: ent:Ent638_1528 short-chain dehydrogenase/reductase SDR
YP_001668904.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2294 transcriptional regulator, LysR family
YP_001668905.1	PFAM: glycerate kinase; KEGG: pen:PSEEN2878 glycerate kinase
YP_001668906.1	PFAM: sugar diacid recognition domain protein; KEGG: pen:PSEEN2879 sugar diacid utilization regulator
YP_001668907.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2880 transporter, MFS family
YP_001668908.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: pen:PSEEN3126 ferredoxin reductase component
YP_001668909.1	PFAM: aldo/keto reductase; KEGG: pen:PSEEN3127 oxidoreductase, aldo/keto reductase family
YP_001668910.1	FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide
YP_001668911.1	PFAM: luciferase family protein; KEGG: bbr:BB2749 probable monooxygenase
YP_001668912.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3132 transcriptional regulator, LysR family
YP_001668913.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: pen:PSEEN3133 membrane bound hydrolase
YP_001668914.1	PFAM: outer membrane porin; KEGG: pen:PSEEN3134 benzoate-specific porin
YP_001668915.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: pen:PSEEN3135 benzoate membrane transport protein MFS superfamily)
YP_001668916.1	TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: pen:PSEEN3136 catechol 1,2-dioxygenase
YP_001668917.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN3139 benzoate transport protein (MFS superfamily)
YP_001668918.1	catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol
YP_001668919.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: pen:PSEEN3141 benzoate 1,2-dioxygenase electron transfer component includes: ferredoxin; ferredoxin--NAD(+) reductase
YP_001668920.1	KEGG: pen:PSEEN3142 benzoate 1,2-dioxygenase beta subunit; TIGRFAM: benzoate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit
YP_001668921.1	TIGRFAM: benzoate 1,2-dioxygenase, large subunit; PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: pen:PSEEN3143 benzoate 1,2-dioxygenase alpha subunit
YP_001668922.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN3012 benABC operon transcriptional activator BenR
YP_001668923.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pst:PSPTO_3056 transcriptional regulator, AraC family
YP_001668924.1	with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine
YP_001668925.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_3059 glycine betaine/L-proline ABC transporter, permease protein
YP_001668926.1	KEGG: pst:PSPTO_3060 glycine betaine/L-proline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001668927.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_3061 transcriptional regulator, LysR family
YP_001668928.1	KEGG: pfo:Pfl_1951 hypothetical protein
YP_001668929.1	KEGG: pfl:PFL_2174 hypothetical protein
YP_001668930.1	TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: pen:PSEEN3013 inositol monophosphatase
YP_001668931.1	PFAM: protein of unknown function DUF204; KEGG: pau:PA14_26450 hypothetical protein
YP_001668932.1	PFAM: UspA domain protein; KEGG: pen:PSEEN2890 universal stress protein
YP_001668933.1	KEGG: pen:PSEEN2891 hypothetical protein
YP_001668934.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: pen:PSEEN2892 hypothetical protein
YP_001668935.1	KEGG: pen:PSEEN2893 hypothetical protein
YP_001668936.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2894 transcriptional regulator, LysR family
YP_001668937.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN2895 aldehyde dehydrogenase
YP_001668938.1	KEGG: pca:Pcar_0793 hypothetical protein
YP_001668939.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN2898 transcriptional regulator, AraC family
YP_001668940.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN2899 glutamine synthetase
YP_001668941.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN2900 putrescine ABC transporter, periplasmic putrescine-binding protein
YP_001668942.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2901 oxidoreductase
YP_001668943.1	KEGG: pen:PSEEN2904 hypothetical protein
YP_001668944.1	KEGG: pen:PSEEN2454 L-serine deaminase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_001668945.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2453 transcriptional regulator, LysR family
YP_001668946.1	KEGG: pen:PSEEN2452 lipopolysaccharide biosynthesis sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_001668947.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: pen:PSEEN2451 glycosyl transferase, WecB/TagA/CpsF family
YP_001668948.1	PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN2450 glycosyl transferase, group 2 family protein
YP_001668949.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN2449 glycosyl transferase, group 1 family protein
YP_001668950.1	PFAM: protein of unknown function DUF535; KEGG: pen:PSEEN2448 glycosyl transferase
YP_001668951.1	PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN2447 glycosyl transferase, group 2 family
YP_001668952.1	KEGG: pen:PSEEN2446 serine O-acetyltransferase
YP_001668953.1	PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN2445 glycosyl transferase
YP_001668954.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: pen:PSEEN2444 hypothetical protein
YP_001668955.1	PFAM: FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: pen:PSEEN2443 oxidoreductase
YP_001668956.1	PFAM: polysaccharide biosynthesis protein; KEGG: pen:PSEEN2442 transporter
YP_001668957.1	KEGG: pen:PSEEN2441 hypothetical protein
YP_001668958.1	KEGG: pen:PSEEN2440 hypothetical protein
YP_001668959.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pen:PSEEN2439 UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase)
YP_001668960.1	KEGG: pen:PSEEN2946 exopolysaccharide biosynthesis related tyrosine-protein kinase
YP_001668961.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: pen:PSEEN2947 exopolysaccharide transport protein
YP_001668962.1	KEGG: pen:PSEEN2948 hypothetical protein
YP_001668963.1	PFAM: polysaccharide export protein; KEGG: pen:PSEEN2949 polysaccharide export protein
YP_001668964.1	KEGG: pen:PSEEN2950 hypothetical protein
YP_001668965.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2382 transcriptional regulator, Cro/CI family
YP_001668966.1	PFAM: short chain fatty acid transporter; KEGG: pen:PSEEN2481 short-chain fatty acid transporter (scFAT family)
YP_001668967.1	KEGG: pen:PSEEN2465 acetoacetyl-CoA transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_001668968.1	KEGG: pen:PSEEN2464 acetoacetyl-CoA transferase, alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_001668969.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2463 transcriptional regulator, LysR family
YP_001668970.1	PFAM: aldo/keto reductase; KEGG: pen:PSEEN2462 oxidoreductase, aldo/keto reductase family
YP_001668971.1	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.
YP_001668972.1	KEGG: pen:PSEEN2414 nucleotidyltransferase/DNA polymerase involved in DNA repair
YP_001668973.1	KEGG: pen:PSEEN2413 hypothetical protein
YP_001668974.1	Represses a number of genes involved in the response to DNA damage
YP_001668975.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN3015 hydrolase, haloacid dehalogenase-like family
YP_001668976.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_5811 malonate utilization transcriptional regulator
YP_001668977.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo2375 putative ferric-citrate TonB-dependent receptor
YP_001668978.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: spe:Spro_2512 major facilitator superfamily MFS_1
YP_001668979.1	PFAM: NIPSNAP family containing protein; KEGG: pna:Pnap_2711 NIPSNAP family containing protein
YP_001668980.1	proposed role in polysaccahride synthesis
YP_001668981.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2709 short-chain dehydrogenase/reductase SDR
YP_001668982.1	PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; KEGG: psa:PST_2119 transcriptional regulator PobR
YP_001668983.1	PFAM: regulatory protein IclR; KEGG: pfo:Pfl_1294 transcriptional regulator, IclR family
YP_001668984.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001668985.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfo:Pfl_1292 general substrate transporter
YP_001668986.1	KEGG: pfo:Pfl_1291 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001668988.1	PFAM: PAAR repeat-containing protein; KEGG: psp:PSPPH_2282 rhs family protein
YP_001668989.1	PFAM: Domain of unknown function DUF1795; KEGG: psp:PSPPH_2281 hypothetical protein
YP_001668990.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: psp:PSPPH_5069 rhs family protein
YP_001668991.1	PFAM: ADP-ribosylation/Crystallin J1; KEGG: psb:Psyr_4977 ADP-ribosylglycohydrolase
YP_001668992.1	KEGG: psp:PSPPH_5068 hypothetical protein
YP_001668993.1	KEGG: psp:PSPPH_0135 hypothetical protein
YP_001668994.1	TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: psp:PSPPH_0134 hypothetical protein
YP_001668995.1	TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: psp:PSPPH_0133 hypothetical protein
YP_001668996.1	TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: psp:PSPPH_0132 protein of unknown function (DUF1316) subfamily
YP_001668997.1	TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: psb:Psyr_4956 protein of unknown function DUF879
YP_001668998.1	TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: psp:PSPPH_0130 ImpH
YP_001668999.1	KEGG: psp:PSPPH_0129 ATP-dependent Clp protease ATP-binding subunit; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001669000.1	KEGG: psp:PSPPH_0128 lipoprotein, putative
YP_001669001.1	TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: psb:Psyr_4960 protein of unknown function DUF876
YP_001669002.1	KEGG: psp:PSPPH_0126 hypothetical protein
YP_001669003.1	TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: psp:PSPPH_0125 ImcF-related family
YP_001669004.1	KEGG: psp:PSPPH_0124 hypothetical protein
YP_001669005.1	PFAM: OmpA/MotB domain protein; KEGG: psp:PSPPH_0123 OmpA domain protein
YP_001669006.1	TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: psp:PSPPH_0122 hypothetical protein
YP_001669007.1	TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: psp:PSPPH_0121 ImpA-related N-terminal family
YP_001669008.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: pfo:Pfl_3139 excinuclease ABC, A subunit
YP_001669009.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pfo:Pfl_3796 sigma-24 (FecI)
YP_001669010.1	PFAM: FecR protein; KEGG: pfo:Pfl_3797 putative FecR
YP_001669011.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfo:Pfl_3798 TonB-dependent siderophore receptor
YP_001669012.1	PFAM: Auxin Efflux Carrier; KEGG: pau:PA14_42100 putative permease
YP_001669013.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2678 hypothetical protein
YP_001669014.1	KEGG: pen:PSEEN2677 hypothetical protein
YP_001669015.1	PFAM: PEBP family protein; KEGG: reu:Reut_B3733 YbhB and YbcL
YP_001669016.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive
YP_001669017.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: psb:Psyr_2901 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001669018.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN3152 ABC transporter, periplasmic binding protein
YP_001669019.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3153 ABC transporter, permease protein
YP_001669020.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3154 ABC transporter, permease protein
YP_001669021.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN3155 sigma-54 dependent transcriptional regulator
YP_001669022.1	PFAM: Citrate transporter; KEGG: pen:PSEEN3157 hypothetical protein
YP_001669023.1	catalyzes the formation of acetoacetate from 3-hydroxybutyrate
YP_001669024.1	serine protease inhibitor, inhibits trypsin and other proteases
YP_001669025.1	AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase
YP_001669026.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pen:PSEEN3160 peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
YP_001669027.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: pen:PSEEN3161 outer membrane autotransporter
YP_001669028.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3162 transporter, LysE family
YP_001669029.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN3163 transcriptional regulator, AraC family
YP_001669030.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3164 transporter, LysE family
YP_001669031.1	PFAM: metallophosphoesterase; KEGG: pen:PSEEN3165 serine/threonine protein phosphatase
YP_001669032.1	KEGG: pen:PSEEN3166 hypothetical protein
YP_001669033.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rca:Rcas_0871 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001669034.1	KEGG: pen:PSEEN3168 hypothetical protein
YP_001669035.1	KEGG: pen:PSEEN3169 methylated-DNA--protein-cysteine methyltransferase (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase); TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_001669036.1	KEGG: psb:Psyr_2496 lipopolysaccharide core biosynthesis domain protein
YP_001669037.1	activates fatty acids by binding to coenzyme A
YP_001669038.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pmy:Pmen_4079 acyl-CoA dehydrogenase domain protein
YP_001669039.1	KEGG: psa:PST_0618 transporter, putative
YP_001669040.1	KEGG: psa:PST_0617 glycosyl hydrolase
YP_001669041.1	PFAM: protein of unknown function DUF1329; KEGG: psa:PST_0616 hypothetical protein
YP_001669042.1	PFAM: protein of unknown function DUF1302; KEGG: psa:PST_0615 hypothetical protein
YP_001669043.1	PFAM: protein of unknown function DUF1234; KEGG: reu:Reut_A2133 protein of unknown function DUF1234
YP_001669044.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reu:Reut_A2149 helix-turn-helix, AraC type
YP_001669045.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: mgi:Mflv_3012 Rieske (2Fe-2S) domain protein
YP_001669046.1	PFAM: DSBA oxidoreductase; KEGG: reu:Reut_A2145 DsbA oxidoreductase
YP_001669047.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reu:Reut_A2132 general substrate transporter:major facilitator superfamily MFS_1
YP_001669048.1	PFAM: protein of unknown function DUF849; KEGG: reh:H16_B2526 hypothetical protein
YP_001669049.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reu:Reut_A2147 taurine dioxygenase
YP_001669050.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rme:Rmet_1716 alcohol dehydrogenase, zinc-binding
YP_001669051.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pau:PA14_29010 putative transcriptional regulator, MerR family
YP_001669052.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pmy:Pmen_3221 NADH:flavin oxidoreductase/NADH oxidase
YP_001669053.1	PFAM: SmpA/OmlA domain protein; KEGG: pap:PSPA7_5598 osmotically inducible lipoprotein OsmE
YP_001669054.1	KEGG: pfo:Pfl_3288 hypothetical protein
YP_001669060.1	KEGG: yli:YALI0A15081g hypothetical protein
YP_001669061.1	KEGG: pen:PSEEN3170 hypothetical protein
YP_001669063.1	KEGG: syn:slr0334 hypothetical protein
YP_001669064.1	PFAM: protein of unknown function DUF159; KEGG: pen:PSEEN2273 hypothetical protein
YP_001669066.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3176 ABC transporte, ATP binding protein
YP_001669067.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2927 transporter
YP_001669068.1	KEGG: pen:PSEEN2928 hypothetical protein
YP_001669069.1	YghU; B2989; one of eight putative glutathione transferase proteins from E. coli
YP_001669070.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001669071.1	PFAM: YheO domain protein; KEGG: pen:PSEEN2009 hypothetical protein
YP_001669072.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN2008 L-serine dehydratase
YP_001669073.1	TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pen:PSEEN2366 carboxynorspermidine decarboxylase NspC
YP_001669074.1	PFAM: Saccharopine dehydrogenase; KEGG: pen:PSEEN2365 hypothetical protein
YP_001669075.1	PFAM: putative methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2364 hypothetical protein
YP_001669076.1	KEGG: pen:PSEEN3359 UDP-glucose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_001669077.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pen:PSEEN3360 UDP-glucuronate 5'-epimerase
YP_001669078.1	PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN3361 glycosyl transferase, group 2 family
YP_001669079.1	PFAM: lipid A biosynthesis domain protein; KEGG: pen:PSEEN3362 hypothetical protein
YP_001669080.1	PFAM: glycosyl transferase family 39; KEGG: pen:PSEEN3363 hypothetical protein
YP_001669081.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_001669082.1	PFAM: Radical SAM domain protein; KEGG: pen:PSEEN2356 hypothetical protein
YP_001669083.1	KEGG: pen:PSEEN2355 hypothetical protein
YP_001669084.1	KEGG: bxe:Bxe_A3019 hypothetical protein
YP_001669085.1	KEGG: ypi:YpsIP31758_2493 hypothetical protein
YP_001669086.1	KEGG: ypi:YpsIP31758_2494 hypothetical protein
YP_001669088.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: pae:PA0262 hypothetical protein
YP_001669089.1	KEGG: vco:VC0395_0022 hypothetical protein
YP_001669090.1	KEGG: psp:PSPPH_2447 UreA amidolyase-related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2
YP_001669091.1	PFAM: Allophanate hydrolase subunit 1; KEGG: pfl:PFL_4548 allophanate hydrolase subunit 1 family
YP_001669092.1	PFAM: LamB/YcsF family protein; KEGG: pfl:PFL_4551 hypothetical protein
YP_001669093.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psp:PSPPH_2444 transcriptional regulator, LysR family
YP_001669094.1	TIGRFAM: trehalose synthase; KEGG: psa:PST_0034 trehalose synthase
YP_001669095.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: pfo:Pfl_5637 outer membrane autotransporter barrel
YP_001669096.1	KEGG: rpb:RPB_3423 hypothetical protein
YP_001669097.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_001669098.1	PFAM: protein of unknown function DUF1275; KEGG: pen:PSEEN2178 hypothetical protein
YP_001669099.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; Osmosensory transporter coiled coil; KEGG: stm:STM4290 proline/glycine betaine transporter
YP_001669100.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_001669101.1	PFAM: protein of unknown function RIO1; KEGG: pst:PSPTO_0748 hypothetical protein
YP_001669102.1	TIGRFAM: GABA permease; PFAM: amino acid permease-associated region; KEGG: psp:PSPPH_4937 GabA permease
YP_001669103.1	catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate
YP_001669104.1	in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution
YP_001669105.1	regulator of gab gene expression
YP_001669106.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN2089 DNA-binding response regulator
YP_001669107.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2088 sensor histidine kinase
YP_001669108.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_001669109.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001669110.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: pen:PSEEN2085 peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
YP_001669111.1	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine
YP_001669112.1	PFAM: peptidase S45 penicillin amidase; KEGG: pen:PSEEN2083 penicillin amidase
YP_001669113.1	KEGG: pen:PSEEN2082 hypothetical protein
YP_001669114.1	KEGG: pen:PSEEN2081 hypothetical protein
YP_001669115.1	KEGG: pfl:PFL_0784 hypothetical protein
YP_001669116.1	KEGG: pen:PSEEN2080 hypothetical protein
YP_001669117.1	KEGG: pfl:PFL_0781 hypothetical protein
YP_001669118.1	KEGG: pfl:PFL_0780 hypothetical protein
YP_001669119.1	PFAM: protein of unknown function DUF490; KEGG: pen:PSEEN2079 hypothetical protein
YP_001669120.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: pen:PSEEN2078 surface antigen
YP_001669121.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN2077 acetyltransferase, GNAT family
YP_001669122.1	removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction
YP_001669123.1	KEGG: pen:PSEEN2072 transmembrane regulator PrtR
YP_001669124.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN2071 ECF sigma factor PrtI
YP_001669125.1	PFAM: Catalase domain protein; KEGG: pen:PSEEN2069 catalase
YP_001669126.1	PFAM: cytochrome B561; KEGG: pen:PSEEN2068 cytochrome b561
YP_001669127.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2067 transporter, MFS family
YP_001669128.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN2066 transcriptional regulator
YP_001669129.1	KEGG: pen:PSEEN2065 hypothetical protein
YP_001669130.1	PFAM: DSBA oxidoreductase; KEGG: pen:PSEEN2064 2-hydroxychromene-2-carboxylate isomerase
YP_001669131.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN2063 oxidoreductase, short chain dehydrogenase/reductase family
YP_001669132.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN2062 transcriptional regulator, TetR family
YP_001669133.1	KEGG: pen:PSEEN2061 hypothetical protein
YP_001669134.1	PFAM: Bile acid:sodium symporter; KEGG: pen:PSEEN3017 hypothetical protein
YP_001669135.1	PFAM: beta-lactamase; KEGG: pen:PSEEN3018 beta-lactamase class C
YP_001669136.1	KEGG: pen:PSEEN3020 hypothetical protein
YP_001669137.1	KEGG: pen:PSEEN3022 hypothetical protein
YP_001669138.1	KEGG: pen:PSEEN3023 hypothetical protein
YP_001669139.1	PFAM: protein of unknown function DUF74; KEGG: pen:PSEEN3024 hypothetical protein
YP_001669140.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3025 hypothetical protein
YP_001669141.1	PFAM: extracellular solute-binding protein family 1; KEGG: pfl:PFL_2704 extracellular solute-binding protein, PotD/PotF family
YP_001669142.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: pfl:PFL_2703 oxidoreductase, FMN-binding
YP_001669143.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pau:PA14_65950 putative transcriptional regulator
YP_001669144.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pfo:Pfl_2451 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001669145.1	FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds
YP_001669146.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2930 transcriptional regulator, LysR family
YP_001669147.1	PFAM: protein of unknown function DUF419; KEGG: pen:PSEEN2931 hypothetical protein
YP_001669148.1	PFAM: protein of unknown function DUF1294; KEGG: pen:PSEEN2932 hypothetical protein
YP_001669149.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_001669150.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: pen:PSEEN2935 methyl-accepting chemotaxis transducer
YP_001669151.1	TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: pen:PSEEN2937 nicotinamide mononucleotide transporter PnuC
YP_001669152.1	KEGG: pen:PSEEN2938 hypothetical protein
YP_001669153.1	KEGG: pen:PSEEN2939 hypothetical protein
YP_001669154.1	KEGG: pen:PSEEN2940 hypothetical protein
YP_001669155.1	KEGG: pen:PSEEN2941 hypothetical protein
YP_001669156.1	PFAM: peptidase C39 bacteriocin processing; KEGG: pen:PSEEN2942 hypothetical protein
YP_001669157.1	KEGG: pen:PSEEN2943 hypothetical protein
YP_001669158.1	KEGG: pen:PSEEN2944 hypothetical protein
YP_001669159.1	PFAM: sulfatase; KEGG: pen:PSEEN2945 sulfatase
YP_001669160.1	PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: pen:PSEEN3016 hypothetical protein
YP_001669161.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: pen:PSEEN2100 urease accessory protein UreG
YP_001669162.1	PFAM: Urease accessory protein UreF; KEGG: pen:PSEEN2099 urease accessory protein UreF
YP_001669163.1	PFAM: HupE/UreJ protein; KEGG: pen:PSEEN2098 urease accessory protein UreJ
YP_001669164.1	involved in the assembly of the urease metallocenter; possible nickel donor
YP_001669165.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_001669166.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active
YP_001669167.1	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter
YP_001669168.1	PFAM: Urease accessory protein UreD; KEGG: pen:PSEEN2093 urease accessory protein UreD
YP_001669169.1	PFAM: integrase family protein; KEGG: pen:PSEEN2998 site-specific recombinase, phage integrase family
YP_001669170.1	PFAM: NnrS family protein; KEGG: pen:PSEEN3000 NnrS protein
YP_001669171.1	PFAM: DEAD_2 domain protein; SMART: Helicase-like, DEXD box c2 type; helicase c2; KEGG: pen:PSEEN2644 hypothetical protein
YP_001669172.1	PFAM: VRR-NUC domain protein; KEGG: pen:PSEEN2643 hypothetical protein
YP_001669173.1	PFAM: major facilitator superfamily MFS_1; KEGG: ecw:EcE24377A_4501 phthalate permease family protein
YP_001669174.1	KEGG: bja:blr3199 hypothetical protein
YP_001669175.1	PFAM: Malate/L-lactate dehydrogenase; KEGG: csa:Csal_1752 malate/L-lactate dehydrogenase
YP_001669176.1	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: reh:H16_B0321 altronate dehydratase
YP_001669177.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mmw:Mmwyl1_0863 transcriptional regulator, LysR family
YP_001669178.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_3514 transcriptional regulator, LysR family
YP_001669179.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_3515 mandelate racemase/muconate lactonizing enzyme
YP_001669180.1	PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_4257 major facilitator superfamily MFS_1
YP_001669181.1	PFAM: regulatory protein GntR HTH; KEGG: pfl:PFL_5228 transcriptional regulator, GntR family
YP_001669182.1	KEGG: pen:PSEEN2632 hypothetical protein
YP_001669183.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN2630 quinone oxidoreductase
YP_001669184.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2629 transcriptional regulator, LysR family
YP_001669185.1	PFAM: integrase family protein; KEGG: mpt:Mpe_A1087 prophage CP4-like integrase
YP_001669186.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_1781 GCN5-related N-acetyltransferase
YP_001669189.1	KEGG: pen:PSEEN3029 chromate transporter
YP_001669190.1	KEGG: pen:PSEEN1307 sensory box-containing diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE4 domain protein; SMART: PAS domain containing protein
YP_001669191.1	KEGG: cgr:CAGL0J01771g unnamed protein product
YP_001669192.1	KEGG: pfo:Pfl_4134 hypothetical protein
YP_001669193.1	KEGG: mxa:MXAN_2374 hypothetical protein
YP_001669194.1	catalyzes the formation of acetate from pyruvate
YP_001669195.1	PFAM: protein of unknown function DUF72; KEGG: psb:Psyr_2383 protein of unknown function DUF72
YP_001669198.1	PFAM: regulatory protein LysR; helix-turn-helix Fis-type; KEGG: azc:AZC_0246 transcriptional regulator
YP_001669199.1	PFAM: Integrase catalytic region; KEGG: pen:PSEEN3944 transposase, IS3 family (orf 2)
YP_001669200.1	PFAM: transposase IS3/IS911 family protein; KEGG: pen:PSEEN3943 transposase, IS3 family (orf 1)
YP_001669201.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl_1960 transcriptional regulator, AraC family
YP_001669202.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: pmy:Pmen_2589 hypothetical protein
YP_001669204.1	PFAM: NUDIX hydrolase; KEGG: psb:Psyr_2430 NUDIX hydrolase
YP_001669205.1	KEGG: pen:PSEEN3086 hypothetical protein
YP_001669206.1	PFAM: methyltransferase small; KEGG: pen:PSEEN3085 DNA methylase
YP_001669207.1	PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6467 major facilitator superfamily MFS_1
YP_001669208.1	PFAM: dienelactone hydrolase; KEGG: rso:RSc0206 hypothetical signal peptide protein
YP_001669209.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: rso:RSc0625 probable transcription regulator protein
YP_001669211.1	KEGG: pen:PSEEN3022 hypothetical protein
YP_001669212.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pst:PSPTO_1875 glutathione-dependent formaldehyde dehydrogenase
YP_001669213.1	KEGG: pmy:Pmen_2271 hypothetical protein
YP_001669214.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pmy:Pmen_2360 short-chain dehydrogenase/reductase SDR
YP_001669215.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pfo:Pfl_5353 peptidase C56, PfpI
YP_001669216.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_4750 sensor histidine kinase
YP_001669217.1	PFAM: response regulator receiver; KEGG: rpc:RPC_1228 response regulator receiver domain protein (CheY-like)
YP_001669218.1	KEGG: pfo:Pfl_2790 hypothetical protein
YP_001669219.1	PFAM: response regulator receiver; KEGG: mex:Mext_3363 response regulator receiver
YP_001669220.1	PFAM: alpha/beta hydrolase fold; KEGG: aav:Aave_3182 alpha/beta hydrolase fold
YP_001669221.1	KEGG: psp:PSPPH_1479 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_001669222.1	PFAM: protein of unknown function DUF1452; KEGG: pen:PSEEN3078 hypothetical protein
YP_001669223.1	PFAM: response regulator receiver; KEGG: pfl:PFL_4716 response regulator
YP_001669224.1	KEGG: psb:Psyr_2382 conservedhypothetical protein
YP_001669225.1	KEGG: psa:PST_0215 hypothetical protein
YP_001669226.1	KEGG: pen:PSEEN3076 hypothetical protein
YP_001669227.1	PFAM: peptidase M42 family protein; KEGG: pfl:PFL_4725 glutamyl aminopeptidase, M42 family
YP_001669228.1	KEGG: pfo:Pfl_2692 hypothetical protein
YP_001669229.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_2411 short-chain dehydrogenase/reductase SDR
YP_001669231.1	PFAM: CinA domain protein; KEGG: pfo:Pfl_2789 CinA-like
YP_001669232.1	KEGG: psb:Psyr_0770 hypothetical protein
YP_001669233.1	KEGG: pfl:PFL_4721 hypothetical protein
YP_001669234.1	PFAM: glycoside hydrolase 15-related; KEGG: xcb:XC_3171 hypothetical protein
YP_001669235.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pap:PSPA7_3133 hypothetical protein
YP_001669236.1	KEGG: pen:PSEEN2766 hypothetical protein
YP_001669237.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pst:PSPTO_2676 glutathione-independent formaldehyde dehydrogenase
YP_001669238.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pfo:Pfl_1868 exodeoxyribonuclease III xth
YP_001669239.1	KEGG: pfo:Pfl_2029 hypothetical protein
YP_001669240.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pfo:Pfl_5353 peptidase C56, PfpI
YP_001669241.1	KEGG: pfo:Pfl_3702 hypothetical protein
YP_001669242.1	KEGG: pen:PSEEN2769 metallothionein
YP_001669243.1	ATP-dependent carboxylate-amine ligase
YP_001669244.1	PFAM: methyltransferase small; Methyltransferase type 12; KEGG: pen:PSEEN3085 DNA methylase
YP_001669245.1	KEGG: pen:PSEEN3086 hypothetical protein
YP_001669246.1	KEGG: psa:PST_3560 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001669247.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B0529 Rieske (2Fe-2S) protein
YP_001669248.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_B0530 choline dehydrogenase
YP_001669249.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B0536 transcriptional regulator, AraC family
YP_001669250.1	TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bov:BOV_1524 putative glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein
YP_001669251.1	PFAM: class II aldolase/adducin family protein; KEGG: bur:Bcep18194_B0534 hypothetical protein
YP_001669252.1	PFAM: Aldehyde Dehydrogenase; KEGG: reu:Reut_B5835 aldehyde dehydrogenase
YP_001669253.1	KEGG: pfl:PFL_2353 hypothetical protein
YP_001669254.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mes:Meso_0625 GCN5-related N-acetyltransferase
YP_001669255.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: pmy:Pmen_3163 protein of unknown function DUF861, cupin_3
YP_001669256.1	KEGG: pfl:PFL_4824 hypothetical protein
YP_001669257.1	PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: bbr:BB2449 hypothetical protein
YP_001669258.1	PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: bbr:BB2448 hypothetical protein
YP_001669259.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfl:PFL_2353 hypothetical protein
YP_001669260.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: dac:Daci_4497 male sterility domain
YP_001669261.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pfl:PFL_2355 transcriptional regulator, MerR family
YP_001669262.1	PFAM: integrase family protein; KEGG: psa:PST_3407 site-specific recombinase, phage integrase family
YP_001669263.1	PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: dac:Daci_2795 3''-kinase
YP_001669264.1	KEGG: psp:PSPPH_0157 hypothetical protein
YP_001669265.1	PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: mms:mma_0788 hypothetical protein
YP_001669266.1	PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: shn:Shewana3_2989 protein of unknown function DUF1254
YP_001669267.1	PFAM: OsmC family protein; KEGG: aci:ACIAD0918 hypothetical protein
YP_001669268.1	KEGG: pfo:Pfl_2393 hypothetical protein
YP_001669269.1	PFAM: outer membrane efflux protein; KEGG: pap:PSPA7_4013 heavy metal RND efflux outer membrane protein, CzcC family
YP_001669270.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pap:PSPA7_4014 heavy metal RND efflux membrane fusion protein, CzcB family
YP_001669271.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pap:PSPA7_4015 heavy metal efflux pump, CzcA family
YP_001669272.1	KEGG: pmy:Pmen_3461 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: PAC repeat-containing protein
YP_001669273.1	TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: oan:Oant_3482 YidE/YbjL duplication
YP_001669274.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: rru:Rru_A1313 membrane protein involved in aromatic hydrocarbon degradation
YP_001669275.1	KEGG: pfl:PFL_2838 lipoprotein, putative
YP_001669276.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mtc:MT3167 transcriptional regulator, AraC family
YP_001669277.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pen:PSEEN3289 ion mechanosensitive channel
YP_001669278.1	PFAM: Spermine synthase; KEGG: pfl:PFL_2841 spermine/spermidine synthase family protein
YP_001669279.1	PFAM: sulfatase; KEGG: pfl:PFL_2842 sulfatase family protein
YP_001669280.1	KEGG: pfl:PFL_2843 nonspecific acid phosphatase
YP_001669281.1	KEGG: pfl:PFL_2844 hypothetical protein
YP_001669282.1	PFAM: TPR repeat-containing protein; von Willebrand factor type A; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pfl:PFL_2845 TPR domain protein, putative
YP_001669283.1	PFAM: von Willebrand factor type A; KEGG: pfl:PFL_2846 von Willebrand factor type A domain protein
YP_001669284.1	KEGG: pfl:PFL_2847 alpha-2 type XI collagen
YP_001669285.1	PFAM: protein of unknown function DUF58; KEGG: pfl:PFL_2848 hypothetical protein
YP_001669286.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pfl:PFL_2849 MoxR domain protein
YP_001669287.1	PFAM: TPR repeat-containing protein; PBS lyase HEAT domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:bll2660 hypothetical protein
YP_001669288.1	KEGG: bbr:BB2448 hypothetical protein
YP_001669289.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: nmu:Nmul_A2052 protein of unknown function DUF6
YP_001669290.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: dac:Daci_1890 transcriptional regulator, GntR family with aminotransferase domain
YP_001669291.1	PFAM: protein of unknown function DUF1109; KEGG: pen:PSEEN3271 hypothetical protein
YP_001669292.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001669293.1	KEGG: pen:PSEEN3274 hypothetical protein
YP_001669294.1	PFAM: protein of unknown function DUF692; KEGG: pen:PSEEN3275 hypothetical protein
YP_001669295.1	KEGG: pen:PSEEN3276 hypothetical protein
YP_001669296.1	PFAM: DoxX family protein; KEGG: pen:PSEEN3277 hypothetical protein
YP_001669297.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pfo:Pfl_2717 transcriptional regulator, AraC family
YP_001669298.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: pfo:Pfl_2716 short-chain dehydrogenase/reductase SDR
YP_001669299.1	TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bmu:Bmul_5645 zinc-binding alcohol dehydrogenase family protein
YP_001669300.1	KEGG: rme:Rmet_5409 hypothetical protein
YP_001669301.1	KEGG: rme:Rmet_5410 hypothetical protein
YP_001669302.1	PFAM: peptidase M50; KEGG: rme:Rmet_5411 peptidase M50
YP_001669303.1	TIGRFAM: conserved repeat domain protein; outer membrane adhesin like proteiin; KEGG: rme:Rmet_5407 hypothetical protein
YP_001669304.1	PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5408 outer membrane efflux protein
YP_001669305.1	PFAM: regulatory protein ArsR; KEGG: pfl:PFL_2186 arsenic resistance transcriptional regulator
YP_001669306.1	TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: pen:PSEEN3307 arsenite efflux pump
YP_001669307.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pen:PSEEN3308 arsenate reductase
YP_001669308.1	TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: pfl:PFL_2183 ArsH protein
YP_001669309.1	KEGG: pen:PSEEN2771 hypothetical protein
YP_001669311.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pfl:PFL_3535 peptidase, M20/M25/M40 family
YP_001669312.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfl:PFL_3534 proline/betaine transporter
YP_001669313.1	KEGG: bam:Bamb_5897 outer membrane protein (porin)-like protein
YP_001669314.1	PFAM: regulatory protein MarR; regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_5417 transcriptional regulator, LysR family
YP_001669315.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bte:BTH_I1124 AhpC/TSA family protein
YP_001669317.1	PFAM: Domain of unknown function DUF1852; KEGG: pfl:PFL_3510 hypothetical protein
YP_001669318.1	catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate
YP_001669319.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: pfl:PFL_3512 flavin reductase domain protein
YP_001669320.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psa:PST_2852 transcriptional regulator MetR
YP_001669321.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_001669322.1	PFAM: glycine hydroxymethyltransferase; KEGG: psp:PSPPH_4750 serine hydroxymethyltransferase
YP_001669323.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_001669324.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_001669325.1	PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pfl:PFL_4639 sigma-54 dependent transcriptional regulator TyrR, putative
YP_001669326.1	involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine
YP_001669327.1	catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine
YP_001669328.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: rha:RHA1_ro05709 hypothetical protein
YP_001669330.1	PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_5056 aldehyde dehydrogenase (NAD(+))
YP_001669331.1	TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sil:SPO0678 agmatinase, putative
YP_001669332.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pau:PA14_46060 transcriptional regulator
YP_001669333.1	KEGG: gfo:GFO_2590 hypothetical protein
YP_001669334.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: pfl:PFL_2518 domain of unknown function (DUF404) family
YP_001669335.1	PFAM: protein of unknown function DUF403; KEGG: pfl:PFL_2519 hypothetical protein
YP_001669336.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: pfl:PFL_2520 transglutaminase-like superfamily domain protein
YP_001669337.1	KEGG: pae:PA1733 putative proteasome-type protease
YP_001669338.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4999 hypothetical protein
YP_001669339.1	TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: asa:ASA_2939 DsdX permease
YP_001669340.1	catalyzes the formation of pyruvate from serine
YP_001669341.1	regulates the synthesis and expression of the dsdXA operon and dadA gene
YP_001669342.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: psa:PST_3455 ATPase of the AAA+ class
YP_001669343.1	KEGG: psa:PST_3457 transcriptional factor MdcH
YP_001669344.1	KEGG: she:Shewmr4_1721 hypothetical protein
YP_001669345.1	KEGG: afw:Anae109_4010 hypothetical protein
YP_001669346.1	PFAM: UvrD/REP helicase; KEGG: afw:Anae109_4011 UvrD/REP helicase
YP_001669348.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_2226 sensory box histidine kinase/response regulator
YP_001669349.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: pfl:PFL_2225 alcohol dehydrogenase, iron-containing
YP_001669350.1	with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone
YP_001669351.1	PFAM: Aldehyde Dehydrogenase; KEGG: pfl:PFL_2222 aldehyde dehydrogenase
YP_001669352.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: pfl:PFL_2221 quinoprotein ethanol dehydrogenase
YP_001669353.1	PFAM: beta-lactamase domain protein; KEGG: pfl:PFL_2220 hydrolase, putative
YP_001669354.1	KEGG: pfl:PFL_2219 hypothetical protein
YP_001669355.1	SMART: extracellular solute-binding protein family 3; KEGG: pfl:PFL_2218 periplasmic binding protein, putative
YP_001669356.1	PFAM: cytochrome c class I; KEGG: pfl:PFL_2217 cytochrome c-550
YP_001669357.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: pfl:PFL_2216 quinoprotein ethanol dehydrogenase
YP_001669358.1	PFAM: pentapeptide repeat protein; KEGG: pfl:PFL_2215 pentapeptide repeat family protein
YP_001669359.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pfl:PFL_2212 DNA-binding response regulator, LuxR family
YP_001669360.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: pfl:PFL_2211 sensor histidine kinase
YP_001669361.1	KEGG: pfl:PFL_2209 hypothetical protein
YP_001669362.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: pfl:PFL_2208 YVTN beta-propeller repeat family protein
YP_001669363.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2207 ABC efflux transporter, ATP-binding protein
YP_001669364.1	PFAM: ABC-2 type transporter; KEGG: pfl:PFL_2206 ABC efflux transporter, permease protein
YP_001669365.1	KEGG: pfl:PFL_2205 hypothetical protein
YP_001669366.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pfl:PFL_2204 DNA-binding response regulator AgmR
YP_001669367.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: pfl:PFL_2203 sensory box histidine kinase/response regulator
YP_001669368.1	PFAM: domain of unknown function DUF1745; KEGG: pfl:PFL_2202 hypothetical protein
YP_001669369.1	KEGG: pfl:PFL_2201 hypothetical protein
YP_001669370.1	KEGG: hch:HCH_04391 hypothetical protein
YP_001669372.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_001669373.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2479 phosphate transport system permease protein 2
YP_001669374.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2478 phosphate ABC transporter, permease protein PstC
YP_001669375.1	TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ana:all4575 phosphate transport system substrate-binding protein
YP_001669376.1	PFAM: protein of unknown function DUF344; KEGG: pap:PSPA7_2825 hypothetical protein
YP_001669378.1	PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: gga:418178 microsomal glutathione S-transferase 1
YP_001669379.1	KEGG: pfl:PFL_2443 hypothetical protein
YP_001669380.1	PFAM: helix-turn-helix domain protein; KEGG: pfl:PFL_2446 DNA-binding protein
YP_001669381.1	PFAM: Hydratase/decarboxylase; KEGG: bja:blr0622 putative hydratase
YP_001669382.1	PFAM: major facilitator superfamily MFS_1; KEGG: ecv:APECO1_2505 hypothetical protein
YP_001669383.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: bbr:BB1480 NAD-dependent 4-hydroxybutyrate dehydrogenase
YP_001669384.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1479 putative regulatory protein
YP_001669385.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pfl:PFL_4167 monooxygenase, DszC family
YP_001669386.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_4166 ABC transporter, permease protein
YP_001669387.1	PFAM: NLPA lipoprotein; KEGG: pfl:PFL_4165 lipoprotein, NlpA family
YP_001669388.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_34270 putative ATP-binding component of ABC transporter
YP_001669389.1	TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; Rhodanese domain protein; KEGG: pst:PSPTO_2632 rhodanese domain protein/cystathionine beta-lyase
YP_001669390.1	KEGG: pst:PSPTO_2631 hypothetical protein
YP_001669391.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pst:PSPTO_2630 amino acid ABC transporter, ATP-binding protein
YP_001669392.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_2629 amino acid ABC transporter, permease protein
YP_001669393.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_2628 amino acid ABC transporter, permease protein
YP_001669394.1	SMART: extracellular solute-binding protein family 3; KEGG: pst:PSPTO_2627 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001669395.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_2626 transcriptional regulator, LysR family
YP_001669396.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bte:BTH_I0319 AsnC family regulatory protein
YP_001669397.1	PFAM: AzlC family protein; KEGG: bte:BTH_I0320 brancheD-chain amino acid transport protein AzlC
YP_001669398.1	PFAM: branched-chain amino acid transport; KEGG: bpd:BURPS668_0363 AzlD family protein
YP_001669399.1	PFAM: UspA domain protein; KEGG: eba:ebA222 universal stress protein
YP_001669401.1	KEGG: kpn:KPN_04766 hypothetical protein
YP_001669402.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: ter:Tery_3032 cupin 4
YP_001669403.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo0453 probable composite transport ATP-binding permase protein
YP_001669404.1	KEGG: lpc:LPC_2246 hypothetical protein
YP_001669405.1	KEGG: pst:PSPTO_2852 hypothetical protein
YP_001669406.1	KEGG: pst:PSPTO_2843 hypothetical protein
YP_001669407.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: pfo:Pfl_3562 transcriptional regulator, TetR family
YP_001669408.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: zmo:ZMO0023 transcriptional regulator
YP_001669409.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: sal:Sala_1861 protein of unknown function DUF6, transmembrane
YP_001669410.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2622 transporter, MFS family
YP_001669411.1	KEGG: pen:PSEEN5381 P-type ATPase, Mg2+ ATPase transporter; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein
YP_001669412.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: psa:PST_1890 probable chemotaxis transducer
YP_001669413.1	PFAM: alpha/beta hydrolase fold; KEGG: ccr:CC_2230 hydrolase, alpha/beta hydrolase fold family
YP_001669414.1	KEGG: psp:PSPPH_1225 hypothetical protein
YP_001669415.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_A4302 transcriptional regulator, GntR family
YP_001669416.1	PFAM: peptidase M24; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: vei:Veis_3512 hypothetical protein
YP_001669417.1	PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: noc:Noc_0564 hypothetical protein
YP_001669419.1	PFAM: dihydrodipicolinate synthetase; KEGG: spe:Spro_2222 dihydrodipicolinate synthase
YP_001669420.1	KEGG: mxa:MXAN_4340 hypothetical protein
YP_001669421.1	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: pfl:PFL_3321 dihydrodipicolinate synthase
YP_001669422.1	cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA
YP_001669423.1	catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans
YP_001669424.1	binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP)
YP_001669425.1	polymerizes uridine 5'-diphosphate glucose to cellulose; acts with BcsB, BcsZ and BcsC in cellulose biosynthesis
YP_001669426.1	KEGG: psa:PST_0282 cellulose synthase, putative
YP_001669428.1	KEGG: psa:PST_0283 hypothetical protein
YP_001669430.1	KEGG: psa:PST_0284 putative protease
YP_001669431.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_2245 ABC transporter, transmembrane region
YP_001669432.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: psp:PSPPH_2832 transcriptional regulator, IclR family
YP_001669433.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pst:PSPTO_2524 ABC transporter, ATP-binding protein
YP_001669434.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_2523 ABC transporter, permease protein
YP_001669435.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_2522 ABC transporter, permease protein
YP_001669436.1	KEGG: psp:PSPPH_2836 Dye-L-proDH alpha
YP_001669437.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: psb:Psyr_2331 FAD-dependent pyridine nucleotide-disulphide oxidoreductase:BFD-like [2Fe-2S]-binding region
YP_001669438.1	PFAM: FAD dependent oxidoreductase; KEGG: pst:PSPTO_2519 oxidoreductase, FAD-binding
YP_001669439.1	PFAM: extracellular solute-binding protein family 1; KEGG: psp:PSPPH_2839 bacterial extracellular solute-binding domain protein
YP_001669440.1	PFAM: outer membrane porin; KEGG: pen:PSEEN4104 porin D
YP_001669441.1	PFAM: class II aldolase/adducin family protein; KEGG: bpt:Bpet3845 Put. aldolase, class II
YP_001669442.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2880 transporter, MFS family
YP_001669443.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: oan:Oant_4590 transcriptional regulator, GntR family
YP_001669444.1	TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: kpn:KPN_00388 bacterial regulatory proteins, IclR
YP_001669445.1	PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: bxe:Bxe_C0879 shikimate 5-dehydrogenase
YP_001669446.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: kpn:KPN_00386 putative electron transfer flavoprotein-NAD/FAD/quinone oxidoreductase
YP_001669447.1	PFAM: NIPSNAP family containing protein; KEGG: kpn:KPN_00385 NIPSNAP
YP_001669448.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: kpn:KPN_00384 hypothetical protein
YP_001669449.1	TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: vch:VCA0120 IcmF-related protein
YP_001669450.1	TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: aeh:Mlg_0056 ImpA domain protein
YP_001669451.1	KEGG: maq:Maqu_3722 hypothetical protein
YP_001669452.1	TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: plu:plu0372 hypothetical protein
YP_001669453.1	TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: maq:Maqu_3732 protein of unknown function DUF877
YP_001669454.1	TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: maq:Maqu_3731 protein of unknown function DUF1316
YP_001669455.1	TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: vco:VC0395_0028 hypothetical protein
YP_001669456.1	TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: maq:Maqu_3729 protein of unknown function DUF1305
YP_001669457.1	PFAM: Forkhead-associated protein; KEGG: vco:VC0395_0026 hypothetical protein
YP_001669458.1	KEGG: aeh:Mlg_0051 hypothetical protein
YP_001669459.1	TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: eca:ECA3438 hypothetical protein
YP_001669460.1	KEGG: vco:VC0395_0022 hypothetical protein
YP_001669461.1	TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: maq:Maqu_0180 protein of unknown function DUF796
YP_001669462.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: pau:PA14_44900 hypothetical protein
YP_001669466.1	PFAM: PAAR repeat-containing protein; KEGG: bxe:Bxe_A3019 hypothetical protein
YP_001669467.1	PFAM: major facilitator superfamily MFS_1; KEGG: psp:PSPPH_2104 transporter, putative
YP_001669468.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pfl:PFL_5391 hypothetical protein
YP_001669469.1	PFAM: oxidoreductase domain protein; CoA-binding domain protein; Oxidoreductase domain; KEGG: pfl:PFL_5392 oxidoreductase, putative
YP_001669470.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pfl:PFL_5393 transcriptional regulator, IclR family
YP_001669471.1	proposed role in polysaccahride synthesis
YP_001669472.1	PFAM: Aldehyde Dehydrogenase; KEGG: bpt:Bpet1388 benzaldehyde dehydrogenase II
YP_001669473.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_6517 alcohol dehydrogenase, zinc-binding domain protein
YP_001669474.1	KEGG: xau:Xaut_1344 conserved hypothetical protein; putative signal peptide
YP_001669475.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: pfo:Pfl_2976 possible transcriptional regulator, fis family
YP_001669476.1	PFAM: histidine kinase HAMP region domain protein; SMART: metal-dependent phosphohydrolase HD region; KEGG: maq:Maqu_2105 putative metal dependent phosphohydrolase
YP_001669477.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN2886 aldehyde dehydrogenase
YP_001669478.1	PFAM: aminotransferase class-III; KEGG: pen:PSEEN2885 aminotransferase, class III
YP_001669479.1	PFAM: regulatory protein LuxR; KEGG: pen:PSEEN2887 transcriptional regulator, LuxR family
YP_001669480.1	PFAM: amino acid permease-associated region; KEGG: msm:MSMEG_0446 putrescine importer
YP_001669481.1	PFAM: Aldehyde Dehydrogenase; KEGG: pmy:Pmen_0227 aldehyde dehydrogenase
YP_001669482.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_2407 transcriptional regulator, MarR family
YP_001669483.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: dac:Daci_2408 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_001669484.1	KEGG: dac:Daci_2409 phosphonate ABC transporter, ATPase subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001669485.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_3991 phosphonate ABC transporter, inner membrane subunit
YP_001669486.1	TIGRFAM: phosphonate metabolism-associated iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; KEGG: vei:Veis_2143 iron-containing alcohol dehydrogenase
YP_001669487.1	PFAM: major facilitator superfamily MFS_1; KEGG: vei:Veis_2142 major facilitator superfamily MFS_1
YP_001669488.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_2144 transcriptional regulator, LysR family
YP_001669489.1	catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate
YP_001669490.1	catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.
YP_001669491.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pmy:Pmen_0163 uracil-xanthine permease
YP_001669492.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfo:Pfl_4325 short-chain dehydrogenase/reductase SDR
YP_001669493.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1302 transcriptional regulator, LysR family
YP_001669494.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbr:BB1082 putative acetyltransferase
YP_001669495.1	KEGG: kpn:KPN_02108 taurine transport protein (ABC superfamily, peri_bind)
YP_001669496.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02107 ABC-type transport system, permease component
YP_001669497.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2221 ABC transporter-related protein
YP_001669498.1	PFAM: Haem oxygenase; KEGG: mmw:Mmwyl1_0316 haem oxygenase
YP_001669499.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bbr:BB1239 cytochrome oxidase subunit II
YP_001669500.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: pen:PSEEN4777 ubiquinol oxidase subunit I, cyanide insensitive
YP_001669501.1	KEGG: bam:Bamb_2523 uncharacterised conserved protein UCP030820
YP_001669502.1	PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: gdi:GDI3239 putative sulfite reductase
YP_001669503.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rme:Rmet_4954 transcriptional regulator, GntR family
YP_001669504.1	KEGG: pen:PSEEN3302 hypothetical protein
YP_001669505.1	KEGG: psb:Psyr_1178 hypothetical protein
YP_001669506.1	PFAM: aminotransferase class I and II; KEGG: pfo:Pfl_1713 aminotransferase, class I and II
YP_001669507.1	PFAM: regulatory protein MarR; KEGG: pfo:Pfl_1712 transcriptional regulator, MarR family
YP_001669508.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfl:PFL_3315 outer membrane ferripyoverdine receptor
YP_001669509.1	PFAM: FecR protein; KEGG: pen:PSEEN2530 FecR-like transmembrane sensor
YP_001669510.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN2531 RNA polymerase sigma-70 factor, ECF subfamily
YP_001669511.1	PFAM: sulfatase; KEGG: pen:PSEEN4076 transmembrane sulphatase
YP_001669512.1	PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: bbr:BB2384 putative TetR-family transcriptional regulator
YP_001669513.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2480 drug resistance transporter, EmrB/QacA subfamily
YP_001669514.1	PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1818 putative transporter
YP_001669515.1	PFAM: protein of unknown function DUF330; KEGG: pfo:Pfl_2832 protein of unknown function DUF330
YP_001669516.1	PFAM: Mammalian cell entry related domain protein; KEGG: pfo:Pfl_2831 hypothetical protein
YP_001669517.1	PFAM: Paraquat-inducible protein A; KEGG: pfo:Pfl_2440 paraquat-inducible protein A
YP_001669518.1	PFAM: Paraquat-inducible protein A; KEGG: pfo:Pfl_2441 paraquat-inducible protein A
YP_001669519.1	KEGG: sbm:Shew185_1554 hypothetical protein
YP_001669520.1	KEGG: pfo:Pfl_2136 hypothetical protein
YP_001669521.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2103 transcriptional regulator, LysR family
YP_001669522.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN3005 hypothetical protein
YP_001669523.1	KEGG: pen:PSEEN3006 hypothetical protein
YP_001669524.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN3007 metabolite MFS transporter, MHS family
YP_001669525.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pau:PA14_55240 hypothetical protein
YP_001669526.1	PFAM: fatty acid hydroxylase; KEGG: pau:PA14_55230 hypothetical protein
YP_001669527.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN3008 hydrolase, alpha/beta fold family
YP_001669528.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN2571 ring-cleaving dioxygenase
YP_001669529.1	PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_2459 alpha/beta hydrolase fold
YP_001669530.1	PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN3009 hypothetical protein
YP_001669531.1	PFAM: UvrD/REP helicase; KEGG: pen:PSEEN3010 helicase; UvrD/REP family
YP_001669532.1	PFAM: Pirin domain protein; KEGG: pen:PSEEN3011 hypothetical protein
YP_001669533.1	KEGG: bur:Bcep18194_B3157 MetA-pathway phenol degradation-like protein
YP_001669534.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: azo:azo2439 probable phenol hydroxylase, subunit P5
YP_001669535.1	PFAM: Phenol hydroxylase conserved region; KEGG: rme:Rmet_1783 phenol hydroxylase conserved region
YP_001669536.1	PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: azo:azo2441 probable phenol hydroxylase, subunit P3
YP_001669537.1	PFAM: monooxygenase component MmoB/DmpM; KEGG: rme:Rmet_1785 monooxygenase component MmoB/DmpM
YP_001669538.1	PFAM: methane/phenol/toluene hydroxylase; KEGG: mpt:Mpe_A3308 phenol hydrolase beta subunit
YP_001669539.1	PFAM: Phenol hydroxylase subunit; KEGG: mpt:Mpe_A3309 phenol hydrolase assembly protein
YP_001669540.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pmy:Pmen_3204 transcriptional regulator, fis family
YP_001669541.1	TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: pen:PSEEN3136 catechol 1,2-dioxygenase
YP_001669542.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; KEGG: pen:PSEEN3301 non-ribosomal peptide synthetase
YP_001669543.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mms:mma_1213 RNA polymerase sigma-70 factor, ECF subfamily
YP_001669544.1	PFAM: FecR protein; KEGG: psa:PST_4175 probable transmembrane sensor
YP_001669545.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfl:PFL_3315 outer membrane ferripyoverdine receptor
YP_001669546.1	PFAM: luciferase family protein; KEGG: pae:PA1186 hypothetical protein
YP_001669547.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_4195 probable transcriptional regulator
YP_001669548.1	KEGG: bxe:Bxe_A4359 hypothetical protein
YP_001669549.1	KEGG: pen:PSEEN3260 hypothetical protein
YP_001669550.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: atu:Atu5311 TonB-dependent receptor
YP_001669551.1	PFAM: FecR protein; KEGG: pen:PSEEN2530 FecR-like transmembrane sensor
YP_001669552.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN2531 RNA polymerase sigma-70 factor, ECF subfamily
YP_001669553.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mms:mma_1233 RNA polymerase sigma-70 factor, ECF subfamily
YP_001669554.1	PFAM: FecR protein; KEGG: mms:mma_1214 Fe2+-dicitrate sensor, membrane component
YP_001669555.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN3225 TonB-dependent siderophore receptor FpvA
YP_001669556.1	PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN3417 sigma-54 dependent transcriptional regulator
YP_001669557.1	KEGG: pen:PSEEN3419 ABC transporter, periplasmic sulfonate-binding protein
YP_001669558.1	PFAM: secretory lipase; KEGG: pen:PSEEN3420 hypothetical protein
YP_001669559.1	KEGG: pfl:PFL_2922 monooxygenase, SsuD family
YP_001669560.1	PFAM: extracellular solute-binding protein family 5; KEGG: pfl:PFL_2921 peptide ABC transporter, periplasmic peptide-binding protein, putative
YP_001669561.1	PFAM: TonB-dependent receptor plug; KEGG: pfl:PFL_2919 TonB-dependent receptor, putative
YP_001669562.1	PFAM: luciferase family protein; KEGG: pfl:PFL_2918 monooxygenase, SsuD family
YP_001669563.1	KEGG: pfl:PFL_3161 peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001669564.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_3162 peptide ABC transporter, permease protein
YP_001669565.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_3163 peptide ABC transporter, permease protein
YP_001669566.1	PFAM: extracellular solute-binding protein family 5; KEGG: pfl:PFL_3164 peptide ABC transporter, periplasmic peptide-binding protein, putative
YP_001669567.1	KEGG: pfl:PFL_3165 monooxygenase, SsuD family
YP_001669568.1	PFAM: class II aldolase/adducin family protein; KEGG: pen:PSEEN3423 hypothetical protein
YP_001669569.1	KEGG: pen:PSEEN3424 hypothetical protein
YP_001669570.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN3425 acyl-CoA dehydrogenase
YP_001669571.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3426 ABC transporter; ATP-binding and memebrane protein
YP_001669572.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3427 ABC transporter, ATP-binding and membrane protein
YP_001669573.1	PFAM: luciferase family protein; KEGG: pen:PSEEN3428 FMNH2-dependent alkanesulfonate monooxygenase
YP_001669574.1	KEGG: pen:PSEEN3429 hypothetical protein
YP_001669575.1	KEGG: pen:PSEEN3430 hypothetical protein
YP_001669576.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN3436 TonB-dependent siderophore receptor
YP_001669577.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN3437 TonB-dependent siderophore receptor
YP_001669578.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3438 ABC transporter, permease protein
YP_001669579.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3439 ABC transporter, permease protein
YP_001669580.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3440 ABC transporter, ATP-binding protein
YP_001669581.1	PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: mes:Meso_0791 animal haem peroxidase
YP_001669582.1	KEGG: nmu:Nmul_A1280 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001669583.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: nmu:Nmul_A1281 type I secretion membrane fusion protein, HlyD
YP_001669584.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pfl:PFL_5374 ABC transporter, permease protein
YP_001669585.1	KEGG: pen:PSEEN3270 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001669586.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: reu:Reut_B3686 TonB-dependent siderophore receptor
YP_001669587.1	PFAM: FecR protein; KEGG: neu:NE1098 putative transmembrane sensor
YP_001669588.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_3271 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001669589.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pfo:Pfl_2169 hypothetical protein
YP_001669590.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: pen:PSEEN2014 4-hydroxyphenylpyruvate dioxygenase
YP_001669591.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN2013 major facilitator family transporter
YP_001669592.1	PFAM: Pyridoxal-dependent decarboxylase; KEGG: pen:PSEEN2370 tyrosine decarboxylase
YP_001669593.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2369 transcriptional regulator, LysR family
YP_001669594.1	PFAM: protein of unknown function DUF28; KEGG: pen:PSEEN2368 hypothetical protein
YP_001669595.1	TIGRFAM: aminophosphonate oxidoreductase; PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2401 hypothetical protein
YP_001669596.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN2400 sugar MFS transporter
YP_001669597.1	TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2399 transcriptional regulator, LysR family
YP_001669598.1	KEGG: pen:PSEEN2397 hypothetical protein
YP_001669599.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2396 trans-aconitate methyltransferase
YP_001669600.1	PFAM: amino acid permease-associated region; KEGG: pfl:PFL_6228 proline-specific permease ProY
YP_001669601.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: pfl:PFL_6227 phytanoyl-CoA dioxygenase, PhyH family
YP_001669602.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A0473 regulatory protein, LysR:LysR, substrate-binding
YP_001669603.1	KEGG: bur:Bcep18194_C7498 hypothetical protein
YP_001669607.1	KEGG: lpc:LPC_1833 hypothetical protein
YP_001669609.1	KEGG: psp:PSPPH_4947 hypothetical protein
YP_001669610.1	KEGG: pmy:Pmen_2248 hypothetical protein
YP_001669611.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: pen:PSEEN3029 chromate transporter
YP_001669612.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc0073 probable transporter transmembrane protein
YP_001669614.1	KEGG: psb:Psyr_2766 hypothetical protein
YP_001669615.1	PFAM: glycoside hydrolase family 24; KEGG: cvi:CV_0727 probable phage-related lysozyme
YP_001669617.1	KEGG: acb:A1S_2022 putative tail fiber
YP_001669619.1	PFAM: Fibronectin type III domain protein; Protein of unknown function DUF1983; KEGG: pst:PSPTO_4041 host specificity protein J, internal deletion
YP_001669620.1	KEGG: pst:PSPTO_4042 hypothetical protein
YP_001669621.1	KEGG: pst:PSPTO_4043 hypothetical protein
YP_001669622.1	KEGG: pst:PSPTO_4044 hypothetical protein
YP_001669623.1	TIGRFAM: phage tail tape measure protein, lambda family; PFAM: Prophage tail length tape measure; KEGG: pst:PSPTO_4046 tail tape meausure protein
YP_001669624.1	KEGG: eba:ebA1855 hypothetical protein
YP_001669626.1	KEGG: nha:Nham_3777 hypothetical protein
YP_001669627.1	PFAM: BRO domain protein; KEGG: plu:plu2952 hypothetical protein
YP_001669628.1	PFAM: Arc domain protein DNA binding domain protein
YP_001669629.1	PFAM: Arc domain protein DNA binding domain protein
YP_001669630.1	KEGG: nme:NMB1330 hypothetical protein
YP_001669631.1	KEGG: rba:RB4084 hypothetical protein
YP_001669632.1	KEGG: xac:XAC2177 hypothetical protein
YP_001669633.1	PFAM: Protein of unknown function DUF1799 phage-related; KEGG: psb:Psyr_2781 hypothetical protein
YP_001669634.1	PFAM: Domain of unknown function DUF1789; KEGG: psb:Psyr_2782 hypothetical protein
YP_001669635.1	PFAM: tail protein 3; KEGG: psb:Psyr_2783 hypothetical protein
YP_001669637.1	KEGG: psb:Psyr_2784 hypothetical protein
YP_001669638.1	KEGG: pfl:PFL_3757 hypothetical protein
YP_001669639.1	KEGG: pst:PSPTO_2079 hypothetical protein
YP_001669640.1	KEGG: cko:CKO_01862 hypothetical protein
YP_001669641.1	KEGG: pfl:PFL_3760 hypothetical protein
YP_001669642.1	KEGG: pfl:PFL_3761 hypothetical protein
YP_001669643.1	KEGG: pfl:PFL_3762 hypothetical protein
YP_001669644.1	TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; KEGG: psb:Psyr_2792 phage putative head morphogenesis protein, SPP1 gp7
YP_001669645.1	KEGG: pfl:PFL_3765 hypothetical protein
YP_001669646.1	PFAM: protein of unknown function DUF264; KEGG: pfl:PFL_3766 hypothetical protein
YP_001669647.1	KEGG: psb:Psyr_2795 hypothetical protein
YP_001669648.1	KEGG: pfl:PFL_3768 hypothetical protein
YP_001669650.1	PFAM: 20S proteasome A and B subunits; KEGG: psb:Psyr_2798 hypothetical protein
YP_001669652.1	KEGG: pap:PSPA7_2402 hypothetical protein
YP_001669653.1	KEGG: pap:PSPA7_2401 peptidase M48, Ste24p
YP_001669654.1	KEGG: pfl:PFL_3772 hypothetical protein
YP_001669656.1	PFAM: Lambda NinG family protein; KEGG: pfl:PFL_3773 NinG protein
YP_001669664.1	KEGG: abo:ABO_0763 hypothetical protein
YP_001669665.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpl:BURPS1106A_1434 DNA replication protein DnaC, putative
YP_001669666.1	KEGG: plu:plu3473 hypothetical protein
YP_001669667.1	PFAM: BRO domain protein; KEGG: pfl:PFL_3777 hypothetical protein
YP_001669669.1	KEGG: bbr:BB3521 phage regulatory protein
YP_001669670.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: psb:Psyr_2812 helix-turn-helix motif:peptidase S24, S26A and S26B
YP_001669671.1	KEGG: psb:Psyr_2813 hypothetical protein
YP_001669676.1	KEGG: psb:Psyr_2818 hypothetical protein
YP_001669681.1	KEGG: xau:Xaut_3682 hypothetical protein
YP_001669682.1	PFAM: ERF family protein; KEGG: xau:Xaut_3683 ERF family protein
YP_001669683.1	PFAM: Exonuclease, phage-type; KEGG: xau:Xaut_3679 hypothetical protein
YP_001669684.1	KEGG: psb:Psyr_2836 hypothetical protein
YP_001669685.1	KEGG: psp:PSPPH_2146 hypothetical protein
YP_001669688.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: psb:Psyr_2828 C-5 cytosine-specific DNA methylase
YP_001669691.1	KEGG: pen:PSEEN3022 hypothetical protein
YP_001669692.1	KEGG: stt:t1391 hypothetical protein
YP_001669698.1	PFAM: metallophosphoesterase; KEGG: pen:PSEEN3165 serine/threonine protein phosphatase
YP_001669699.1	KEGG: sec:SC082 hypothetical protein
YP_001669700.1	PFAM: integrase family protein; KEGG: lpp:lpp2312 hypothetical protein
YP_001669701.1	PFAM: regulatory protein MerR; KEGG: pen:PSEEN1970 transcriptional regulator, MerR family
YP_001669702.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_001669703.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_001669704.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_001669705.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_001669706.1	PFAM: ribosomal protein L35; KEGG: pen:PSEEN1965 50S ribosomal subunit protein A
YP_001669707.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_001669708.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_001669709.1	KEGG: pen:PSEEN1962 hypothetical protein
YP_001669710.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pfl:PFL_2109 cold shock protein CapA, fragment-related protein
YP_001669711.1	KEGG: pen:PSEEN1960 hypothetical protein
YP_001669712.1	KEGG: pen:PSEEN1959 hypothetical protein
YP_001669713.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pen:PSEEN1958 inosine-uridine preferring nucleoside hydrolase
YP_001669714.1	cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source
YP_001669715.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: pen:PSEEN1956 ribokinase RbsK
YP_001669716.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pen:PSEEN1955 ribose operon repressor RbsR
YP_001669717.1	PFAM: inner-membrane translocator; KEGG: pen:PSEEN1954 ribose ABC transporter, permease protein RbsC
YP_001669718.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1953 ribose ABC transporter, ATP-binding protein RbsA
YP_001669719.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pen:PSEEN1952 ribose ABC transporter, periplasmic ribose-binding protein RbsB
YP_001669720.1	KEGG: pen:PSEEN1951 glutaminase-asparaginase; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase
YP_001669721.1	TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: pen:PSEEN3090 homoprotocatechuate degradative operon repressor
YP_001669722.1	TIGRFAM: 4-hydroxyphenylacetate catabolism regulatory protein HpaA; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN3091 4-hydroxyphenylacetate catabolism regulatory protein HpaA
YP_001669723.1	KEGG: pen:PSEEN3092 4-hydroxyphenylacetate degradation; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HhdD isomerase) (5-carboxymethyl-2-hydroxymuconate delta-isomerase); TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase
YP_001669724.1	KEGG: pen:PSEEN3093 4-hydroxyphenylacetate degradation bifunctional; 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase (5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase) (OPET decarboxylase); TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase
YP_001669725.1	TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN3094 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (CHMS dehydrogenase)
YP_001669726.1	KEGG: pen:PSEEN3095 3,4-dihydroxyphenylacetate 2,3-dioxygenase (homoprotocatechuate 2,3-dioxygenase) (HPC dioxygenase); TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B
YP_001669727.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: pen:PSEEN3096 5-carboxymethyl-2-hydroxymuconate delta-isomerase (5-carboxymethyl-2-hydroxymuconic acid isomerase) (CHM isomerase) (CHMI)
YP_001669728.1	PFAM: major facilitator superfamily MFS_1; KEGG: pap:PSPA7_0966 probable MFS transporter
YP_001669729.1	KEGG: pen:PSEEN3097 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (OHED hydratase); TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase
YP_001669730.1	KEGG: pen:PSEEN3098 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, with PEP/pyruvate domain; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase
YP_001669731.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: pen:PSEEN3104 P-hydroxyphenylacetate hydroxylase C1:reductase component
YP_001669732.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN3105 P-hydroxyphenylacetate hydroxylase C2:oxygenase component
YP_001669733.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN3089 transcriptional regulator, TetR family
YP_001669734.1	TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: pen:PSEEN3090 homoprotocatechuate degradative operon repressor
YP_001669735.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN3099 oxidoreductase; aromatic-ring hydroxylase
YP_001669736.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: pen:PSEEN3100 hypothetical protein
YP_001669737.1	activator of genes involved in phenylacetic acid catabolism
YP_001669738.1	KEGG: pen:PSEEN3102 hypothetical protein
YP_001669739.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN3103 amino acid permease
YP_001669740.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN3107 aldehyde dehydrogenase
YP_001669741.1	KEGG: pen:PSEEN3112 hypothetical protein
YP_001669742.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3088 bicyclomycin/multidrug transport protein (MFS superfamily)
YP_001669743.1	catalyzes the formation of L-proline from L-ornithine
YP_001669744.1	PFAM: Endoribonuclease L-PSP; KEGG: mmw:Mmwyl1_3167 endoribonuclease L-PSP
YP_001669745.1	PFAM: FAD dependent oxidoreductase; KEGG: mmw:Mmwyl1_0459 FAD dependent oxidoreductase
YP_001669746.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pau:PA14_34990 putative TonB-dependent receptor
YP_001669747.1	PFAM: protein of unknown function DUF1654; KEGG: pen:PSEEN1950 hypothetical protein
YP_001669748.1	PFAM: Endonuclease I; KEGG: pen:PSEEN1949 DNA-specific endonuclease I
YP_001669749.1	KEGG: pen:PSEEN1948 hypothetical protein
YP_001669750.1	PFAM: Sporulation domain protein; KEGG: pen:PSEEN2166 hypothetical protein
YP_001669751.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2164 FAD-dependant oxidoreductase
YP_001669752.1	KEGG: pen:PSEEN2163 hypothetical protein
YP_001669753.1	KEGG: pen:PSEEN2162 hypothetical protein
YP_001669754.1	PFAM: Integral membrane protein TerC; KEGG: pen:PSEEN2161 hypothetical protein
YP_001669755.1	KEGG: pen:PSEEN2160 lipoprotein
YP_001669756.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2159 transcriptional activator, LysR family
YP_001669757.1	involved in the import of serine and threonine coupled with the import of sodium
YP_001669758.1	PFAM: protein of unknown function DUF480; KEGG: pen:PSEEN2299 hypothetical protein
YP_001669759.1	KEGG: pen:PSEEN2298 hypothetical protein
YP_001669760.1	TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN2297 alkyl hydroperoxide reductase subunit F
YP_001669761.1	TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN2296 alkyl hydroperoxide reductase, C22 subunit, thioredoxin-like (detoxification of hydroperoxides)
YP_001669762.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
YP_001669763.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pen:PSEEN2294 glucose-1-phosphate uridylyltransferase
YP_001669764.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN2293 cytochrome c
YP_001669765.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN2292 cytochrome c
YP_001669766.1	KEGG: pen:PSEEN2290 hypothetical protein
YP_001669767.1	PFAM: Domain of unknown function DUF1883; KEGG: pen:PSEEN2289 hypothetical protein
YP_001669768.1	KEGG: pen:PSEEN2288 hypothetical protein
YP_001669769.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: pen:PSEEN2287 oxidoreductase, 2-nitropropane dioxygenase family
YP_001669770.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN2286 molybdate ABC transporter, periplasmic molybdate-binding protein
YP_001669771.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN2285 molybdate ABC transporter, permease protein
YP_001669772.1	KEGG: pen:PSEEN2284 molybdate ABC transporter, ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase
YP_001669773.1	KEGG: pen:PSEEN2283 DNA topoisomerase IB
YP_001669774.1	affects carbohydrate metabolism; has regulatory role in many processes
YP_001669775.1	PFAM: response regulator receiver; KEGG: pen:PSEEN2281 response regulator
YP_001669776.1	KEGG: pen:PSEEN2280 signal transduction protein; PFAM: KaiA binding; SMART: AAA ATPase
YP_001669777.1	KEGG: pen:PSEEN2279 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001669778.1	KEGG: pen:PSEEN2278 hypothetical protein
YP_001669779.1	PFAM: DoxX family protein; KEGG: pen:PSEEN2275 hypothetical protein
YP_001669780.1	KEGG: pen:PSEEN2274 hypothetical protein
YP_001669781.1	similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs
YP_001669782.1	KEGG: psb:Psyr_3356 hypothetical protein
YP_001669783.1	SohB; periplasmic protein; member of the peptidase S49 family
YP_001669784.1	PFAM: Phosphoglycerate mutase; KEGG: pen:PSEEN2270 phosphoglycerate mutase family protein
YP_001669785.1	PFAM: Sterol-binding domain protein; KEGG: pfo:Pfl_3116 sterol-binding
YP_001669786.1	PFAM: aminoglycoside phosphotransferase; KEGG: pen:PSEEN2268 aminoglycoside aminotranferase
YP_001669787.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN2267 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001669788.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2266 hypothetical protein
YP_001669789.1	KEGG: pen:PSEEN2264 hypothetical protein
YP_001669790.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ajs:Ajs_4122 diguanylate cyclase
YP_001669791.1	PFAM: 17 kDa surface antigen; KEGG: pen:PSEEN2262 hypothetical protein
YP_001669792.1	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pen:PSEEN2261 transporter, sodium:sulfate symporter family
YP_001669793.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN2260 diguanylate cyclase (GGDEF) domain
YP_001669794.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN2259 hypothetical protein
YP_001669795.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN2258 transcriptional regulator, LysR family
YP_001669796.1	KEGG: pen:PSEEN2257 hypothetical protein
YP_001669798.1	PFAM: Variant SH3 domain protein; SMART: SH3 domain protein; KEGG: pen:PSEEN2253 hypothetical protein
YP_001669799.1	PFAM: alpha/beta hydrolase fold; KEGG: pfo:Pfl_2255 alpha/beta hydrolase fold
YP_001669801.1	PFAM: outer membrane porin; KEGG: psa:PST_1676 benzoate-specific porin
YP_001669802.1	PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2307 major facilitator superfamily MFS_1
YP_001669803.1	PFAM: isochorismatase hydrolase; KEGG: spe:Spro_2308 N-carbamoylsarcosine amidase
YP_001669804.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: spe:Spro_2309 Asp/Glu racemase
YP_001669805.1	PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2310 alpha/beta hydrolase fold
YP_001669806.1	PFAM: monooxygenase FAD-binding; KEGG: spe:Spro_2311 monooxygenase FAD-binding
YP_001669807.1	KEGG: spe:Spro_2312 hypothetical protein
YP_001669808.1	PFAM: regulatory protein MarR; KEGG: azc:AZC_2473 transcriptional regulator
YP_001669809.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pap:PSPA7_3672 probable oxidoreductase
YP_001669810.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; cytochrome c class I; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; KEGG: spe:Spro_2315 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
YP_001669811.1	PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0653 transcriptional regulator, TetR family
YP_001669812.1	PFAM: protein of unknown function DUF182; KEGG: pap:PSPA7_5263 hypothetical protein
YP_001669813.1	TIGRFAM: salicylate 1-monooxygenase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: aci:ACIAD1424 salicylate 1-monooxygenase
YP_001669814.1	PFAM: General substrate transporter; protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: eba:ebA5311 benzoate MFS transporter
YP_001669815.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo2518 LysR-family transcriptional regulator
YP_001669816.1	PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA3773 hypothetical protein
YP_001669817.1	Catalyzes the deamination of cytosine to uracil and ammonia
YP_001669818.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3046 transcriptional regulator, LysR family
YP_001669819.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rde:RD1_3192 acetyltransferase, putative
YP_001669820.1	KEGG: bxe:Bxe_B0643 3-oxoadipate CoA-transferase subunit A (PcaI); TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_001669821.1	KEGG: bmu:Bmul_5287 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_001669823.1	PFAM: protein of unknown function UPF0005; KEGG: pen:PSEEN2225 hypothetical protein
YP_001669824.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN2224 transporter, xanthine/uracil permease family
YP_001669825.1	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs
YP_001669826.1	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs
YP_001669827.1	TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: pen:PSEEN2221 hypothetical protein
YP_001669828.1	TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: pen:PSEEN2220 sulfite reductase, gamma subunit DsrC-like
YP_001669829.1	PFAM: glycosyl transferase family 3; KEGG: pen:PSEEN2219 phosphoribosyltransferase
YP_001669830.1	KEGG: pen:PSEEN2218 hypothetical protein
YP_001669831.1	TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pen:PSEEN2217 siroheme synthase
YP_001669832.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001669833.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_001669834.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN2214 DNA-dependant ATPase
YP_001669835.1	participates with LolB in the incorporation of lipoprotein into the outer membrane
YP_001669836.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: pen:PSEEN2212 cell division protein FtsK
YP_001669837.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_001669838.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_001669839.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_001669840.1	KEGG: pen:PSEEN2207 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001669841.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_001669842.1	KEGG: pen:PSEEN2205 cold-shock protein CspD; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_001669843.1	TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: pen:PSEEN2204 isocitrate dehydrogenase
YP_001669844.1	KEGG: pen:PSEEN2202 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type
YP_001669845.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN2201 hydrolase, NUDIX family
YP_001669846.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_001669847.1	HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis
YP_001669848.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_001669849.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: pen:PSEEN2197 hypothetical protein
YP_001669850.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN2196 acetyl transferase, GNAT family
YP_001669851.1	decatenates replicating daughter chromosomes
YP_001669852.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN2188 oxidoreductase with FAD/NAD(P)-binding domain
YP_001669853.1	PFAM: alpha/beta hydrolase fold; KEGG: pfo:Pfl_2172 alpha/beta hydrolase fold
YP_001669854.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN2185 hypothetical protein
YP_001669855.1	can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates
YP_001669856.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001669857.1	involved in regulation of intracellular pH under alkaline conditions
YP_001669858.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: pen:PSEEN2180 hypothetical protein
YP_001669859.1	PFAM: Lipocalin family protein; KEGG: pmy:Pmen_0511 lipocalin family protein
YP_001669860.1	KEGG: psb:Psyr_2640 NUDIX hydrolase
YP_001669861.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN2683 ribonuclease Z
YP_001669862.1	KEGG: pen:PSEEN3303 hypothetical protein
YP_001669863.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_001669864.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN3254 transporter, NCS1 family
YP_001669865.1	catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position
YP_001669866.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_001669867.1	catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines
YP_001669868.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: pen:PSEEN3246 transcriptional regulator, TetR family
YP_001669869.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_4319 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001669870.1	TIGRFAM: addiction module antidote protein, HigA family; KEGG: pen:PSEEN1946 proteic killer active protein
YP_001669871.1	PFAM: plasmid maintenance system killer; KEGG: pen:PSEEN1945 proteic killer suppression protein
YP_001669872.1	PFAM: glycoside hydrolase 15-related; KEGG: pen:PSEEN1941 glycosyl hydrolase, family 15
YP_001669873.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001669874.1	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate
YP_001669875.1	KEGG: pen:PSEEN1938 hypothetical protein
YP_001669876.1	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose
YP_001669877.1	KEGG: pen:PSEEN2053 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001669878.1	KEGG: pen:PSEEN2052 4-alpha-glucanotransferase MalQ; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77
YP_001669879.1	KEGG: pen:PSEEN2051 maltooligosyl trehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001669880.1	KEGG: pen:PSEEN2050 hypothetical protein
YP_001669881.1	KEGG: pen:PSEEN2049 glycosyl hydrolase GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001669882.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pfl:PFL_2876 endonuclease/exonuclease/phosphatase family protein
YP_001669883.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: pen:PSEEN2047 outer membrane, autotransporter barrel domain protein
YP_001669884.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
YP_001669885.1	KEGG: pen:PSEEN2045 trehalose synthase/glycosidase fusion protein; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001669886.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pen:PSEEN2044 glycosidase, alpha-amylase family protein
YP_001669887.1	KEGG: pen:PSEEN2043 hypothetical protein
YP_001669888.1	activates fatty acids by binding to coenzyme A
YP_001669889.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN3386 isovaleryl-CoA dehydrogenase
YP_001669890.1	PFAM: carboxyl transferase; KEGG: pen:PSEEN3387 3-methylcrotonyl-CoA carboxylase, beta subunit
YP_001669891.1	catalyzes the hydration of gamma-carboxygeranoyl-CoA to 3-hydroxy-gamma-carboxygeranoyl-CoA
YP_001669892.1	PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: pen:PSEEN3389 methylcrotonoyl-CoA carboxylase alpha chain
YP_001669893.1	PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: pen:PSEEN3390 transcriptional regulator, Cro/CI family
YP_001669894.1	KEGG: pen:PSEEN3391 hypothetical protein
YP_001669895.1	PFAM: Sigma-70 region 4 type 2; KEGG: pen:PSEEN3392 hypothetical protein
YP_001669896.1	PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: rpa:RPA3398 possible arsenite permease
YP_001669897.1	KEGG: pen:PSEEN3448 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_001669898.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_001669899.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN3450 response regulator GacA (global antibiotic and cyanide control protein, LuxR/UhpA family)
YP_001669900.1	SMART: helix-turn-helix domain protein; KEGG: pen:PSEEN3451 transcriptional regulator, Cro/CI family
YP_001669901.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN3464 acetyltransferase, GNAT family
YP_001669902.1	PFAM: protein of unknown function DUF488; KEGG: pen:PSEEN3465 hypothetical protein
YP_001669903.1	PFAM: phosphate transporter; KEGG: pen:PSEEN3466 low-affinity inorganic phosphate transporter
YP_001669904.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN3467 glutathione S-transferase
YP_001669905.1	KEGG: pen:PSEEN3472 hypothetical protein
YP_001669906.1	PFAM: Spore germination protein; amino acid permease-associated region; KEGG: pen:PSEEN3473 gamma-aminobutyrate permease
YP_001669907.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3474 transcriptional regulator, LysR family
YP_001669908.1	PFAM: aminotransferase class-III; KEGG: pen:PSEEN3475 4-aminobutyrate aminotransferase, PLP-dependent
YP_001669909.1	KEGG: pen:PSEEN3476 hypothetical protein
YP_001669910.1	KEGG: pen:PSEEN3477 hypothetical protein
YP_001669911.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001669912.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN3479 probable sulfate transproter, MFS family
YP_001669913.1	PFAM: NolW domain protein; KEGG: pen:PSEEN3480 type II secretion system protein D; signal peptide
YP_001669914.1	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: pen:PSEEN3481 isocitrate lyase
YP_001669915.1	KEGG: pen:PSEEN3574 hypothetical protein
YP_001669916.1	KEGG: pen:PSEEN5265 hypothetical protein
YP_001669917.1	PFAM: YhhN family protein; KEGG: pen:PSEEN3482 hypothetical protein
YP_001669918.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001669919.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_001669920.1	NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms
YP_001669921.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001669922.1	shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase
YP_001669923.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001669924.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001669925.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001669926.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001669927.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001669928.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_001669929.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001669930.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001669931.1	PFAM: transcriptional activator Ogr/delta; KEGG: csa:Csal_1361 hypothetical protein
YP_001669932.1	PFAM: CI repressor; KEGG: vvy:VV2150 hypothetical protein
YP_001669935.1	PFAM: regulatory protein LuxR; KEGG: pap:PSPA7_3898 transcriptional regulator LasR
YP_001669936.1	PFAM: NADPH-dependent FMN reductase; KEGG: pen:PSEEN3555 oxidoreductase, flavoprotein
YP_001669937.1	KEGG: pen:PSEEN3556 hypothetical protein
YP_001669938.1	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: pen:PSEEN3557 arginine/lysine/ornithine decarboxylase
YP_001669939.1	3'-5' exonuclease of DNA polymerase III
YP_001669940.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_001669941.1	KEGG: pen:PSEEN3560 hypothetical protein
YP_001669942.1	KEGG: pen:PSEEN3561 hydroxyacylglutathione hydrolase GloB; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein
YP_001669943.1	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: pen:PSEEN3562 membrane-bound lytic murein transglycosylase D MltD
YP_001669944.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN3564 ABC transporter, periplamic binding protein
YP_001669945.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN3565 ABC transporter, periplamic binding protein
YP_001669946.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3566 ABC transporter, permease protein
YP_001669947.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3567 ABC transporter, permease protein
YP_001669948.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN3568 ABC transporter, ATP-binding protein
YP_001669949.1	KEGG: pap:PSPA7_3407 hypothetical protein
YP_001669950.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bam:Bamb_4377 metal-dependent phosphohydrolase
YP_001669951.1	PFAM: aminoglycoside phosphotransferase; aminotransferase class-III; KEGG: pen:PSEEN0260 aminotransferase, class III
YP_001669952.1	PFAM: amine oxidase; KEGG: kra:Krad_1593 amine oxidase
YP_001669953.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mfa:Mfla_0402 transcriptional regulator, LysR family
YP_001669954.1	KEGG: pae:PA3713 hypothetical protein
YP_001669955.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3605 transcriptional regulator of kdp operon
YP_001669956.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: pen:PSEEN3606 two-component sensor KdpD sensory kinase
YP_001669957.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex
YP_001669958.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_001669959.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_001669960.1	PFAM: protein of unknown function UPF0118; KEGG: pen:PSEEN3611 hypothetical protein
YP_001669961.1	KEGG: pen:PSEEN3612 hypothetical protein
YP_001669962.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN3613 hydrolase, alpha/beta fold family
YP_001669963.1	KEGG: pen:PSEEN3614 hydrolase, alpha/beta fold family
YP_001669964.1	KEGG: pen:PSEEN3615 hypothetical protein
YP_001669965.1	TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: pen:PSEEN3616 phosphohistidine phosphatase SixA
YP_001669966.1	KEGG: pen:PSEEN3617 hypothetical protein
YP_001669967.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_001669968.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN3619 TonB-dependent receptor
YP_001669969.1	KEGG: pen:PSEEN3620 hypothetical protein
YP_001669970.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3621 sensor histidine kinase/response regulator (hybrid)
YP_001669971.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_001669972.1	FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001669973.1	PFAM: amidohydrolase 2; KEGG: pen:PSEEN3625 amidohydrolase
YP_001669974.1	PFAM: Pirin domain protein; KEGG: pen:PSEEN3626 hypothetical protein
YP_001669975.1	PFAM: dienelactone hydrolase; KEGG: pen:PSEEN3627 dienelactone hydrolase
YP_001669976.1	molecular chaperone
YP_001669977.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN3629 hypothetical protein
YP_001669978.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN3630 hypothetical protein
YP_001669979.1	KEGG: pen:PSEEN3631 lipoprotein
YP_001669980.1	PFAM: protein of unknown function DUF599; KEGG: pen:PSEEN3632 hypothetical protein
YP_001669981.1	PFAM: branched-chain amino acid transport system II carrier protein; KEGG: pen:PSEEN3633 branched chain amino acid transporter
YP_001669982.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_001669983.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_001669984.1	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001669985.1	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA
YP_001669986.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_001669987.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_001669988.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_001669989.1	TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: pen:PSEEN3643 succinate dehydrogenase, hydrophobic membrane anchor protein
YP_001669990.1	TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: pen:PSEEN3644 succinate dehydrogenase, cytochrome b556 subunit
YP_001669991.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
YP_001669992.1	PFAM: lipid-binding START domain protein; KEGG: pen:PSEEN3647 hypothetical protein
YP_001669993.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN3648 hypothetical protein
YP_001669994.1	KEGG: pen:PSEEN3649 hypothetical protein
YP_001669995.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN3650 transcriptional regulator, GntR family
YP_001669996.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN3654 outer membrane protein; OmpA family
YP_001669997.1	KEGG: pen:PSEEN3655 lipoprotein
YP_001669998.1	KEGG: pen:PSEEN3656 hypothetical protein
YP_001669999.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: pen:PSEEN3657 electron transfer flavoprotein alpha-subunit
YP_001670000.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: pen:PSEEN3658 electron transfer flavoprotein beta-subunit
YP_001670001.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: pen:PSEEN3660 electron transfer flavoprotein-ubiquinone oxidoreductase
YP_001670002.1	SMART: helix-turn-helix domain protein; KEGG: bmu:Bmul_4193 transcriptional regulator, XRE family
YP_001670003.1	KEGG: bur:Bcep18194_B1537 hypothetical protein
YP_001670004.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN3661 permease, MFS superfamily
YP_001670005.1	KEGG: pen:PSEEN3662 hypothetical protein
YP_001670006.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas aeruginosa this extracytoplasmic function sigma factor may be involved in the transcription of the ferric pyoverdine receptor gene, fpvA.
YP_001670007.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN3664 RND efflux membrane fusion protein
YP_001670008.1	PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: pen:PSEEN3665 efflux ABC transporter, ATP-binding/permease protein
YP_001670009.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN3666 multidrug efflux outer membrane protein, RND family
YP_001670010.1	KEGG: pfo:Pfl_1854 twin-arginine translocation pathway signal
YP_001670011.1	PFAM: peptidase M19 renal dipeptidase; KEGG: psb:Psyr_1966 peptidase M19, renal dipeptidase
YP_001670012.1	PFAM: aminotransferase class V; KEGG: pen:PSEEN3221 aminotransferase, class V
YP_001670013.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pen:PSEEN3228 lipase
YP_001670014.1	SMART: transcription factor jumonji jmjC domain protein; KEGG: pfo:Pfl_1843 transcription factor jumonji, JmjC
YP_001670015.1	PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: pen:PSEEN3668 siderophore interacting protein
YP_001670016.1	catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde
YP_001670017.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3670 sensor histidine kinase ArmS
YP_001670018.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3671 DNA-binding response regulator
YP_001670019.1	KEGG: psb:Psyr_0686 hypothetical protein
YP_001670020.1	PFAM: GAD-like domain protein; Domain of unknown function DUF1851; KEGG: psb:Psyr_0687 hypothetical protein
YP_001670021.1	PFAM: GAD-like domain protein; Domain of unknown function DUF1851; KEGG: psb:Psyr_0687 hypothetical protein
YP_001670022.1	KEGG: pen:PSEEN2871 hypothetical protein
YP_001670023.1	PFAM: protein of unknown function DUF182; KEGG: pau:PA14_61120 putative xanthine dehydrogenase accessory factor X
YP_001670024.1	PFAM: cytochrome c class I; KEGG: pen:PSEEN2873 cytochrome c
YP_001670025.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pen:PSEEN2874 oxidase, small subunit
YP_001670026.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; KEGG: pen:PSEEN2875 oxidase, large subunit
YP_001670027.1	PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: pen:PSEEN1818 thiol:disulfide interchange protein DsbD
YP_001670028.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN1817 thiol:disulfide interchange protein DsbE
YP_001670029.1	Involved in disulfide bond formation
YP_001670030.1	KEGG: pen:PSEEN1815 pyoverdine synthetase A
YP_001670031.1	PFAM: transposase IS3/IS911 family protein; KEGG: pen:PSEEN3943 transposase, IS3 family (orf 1)
YP_001670032.1	PFAM: Integrase catalytic region; KEGG: pen:PSEEN3944 transposase, IS3 family (orf 2)
YP_001670034.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_0457 ABC transporter related
YP_001670035.1	catalyzes the specific recognition and activation of amino acids during peptide synthesis; involved in the biosynthesis of the peptide chain of pyoverdines
YP_001670036.1	RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease
YP_001670037.1	KEGG: pen:PSEEN1813 siderophore biosynthesis protein
YP_001670038.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN1812 periplasmic binding protein
YP_001670039.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: pen:PSEEN1811 exonuclease
YP_001670040.1	PFAM: protein of unknown function DUF1255; KEGG: pen:PSEEN1810 hypothetical protein
YP_001670041.1	KEGG: pen:PSEEN1809 hypothetical protein
YP_001670042.1	CcoN; FixN
YP_001670043.1	CcoO; FixO
YP_001670044.1	KEGG: pen:PSEEN1805 cytochrome c oxidase, cbb3-type, CcoQ subunit
YP_001670045.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: pen:PSEEN1804 cytochrome c oxidase, cbb3-type, subunit III
YP_001670046.1	CcoN; FixN
YP_001670047.1	CcoO; FixO
YP_001670048.1	PFAM: Cbb3-type cytochrome oxidase component; KEGG: pen:PSEEN1800 cytochrome c oxidase, cbb3-type, CcoQ subunit
YP_001670049.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: pen:PSEEN1799 cytochrome c oxidase, cbb3-type, subunit III
YP_001670050.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pen:PSEEN1798 oxidase with iron-sulfur cluster
YP_001670051.1	KEGG: pen:PSEEN1797 hypothetical protein
YP_001670052.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pen:PSEEN1796 copper-transporting P-type ATPase CcoI
YP_001670053.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: pen:PSEEN1795 cytochrome oxidase maturation protein, cbb3-type CcoS
YP_001670054.1	KEGG: pen:PSEEN1794 hypothetical protein
YP_001670055.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001670056.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pen:PSEEN1792 transcriptional regulator Anr
YP_001670057.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_001670058.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_001670059.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN1789 hypothetical protein
YP_001670060.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
YP_001670061.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN1787 hypothetical protein
YP_001670062.1	KEGG: pen:PSEEN1786 hypothetical protein
YP_001670063.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN1785 transcriptional regulator
YP_001670064.1	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB
YP_001670065.1	interacts directly with the cell division protein ftsZ; probable receptor for the septal ring structure, may anchor it to the inner-membrane
YP_001670066.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: pen:PSEEN1767 chromosome segregation SMC protein
YP_001670067.1	PFAM: regulatory protein GntR HTH; KEGG: pen:PSEEN1766 transcriptional regulator (GntR-family)
YP_001670068.1	TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: pen:PSEEN1765 xanthine dehydrogenase, small subunit XhdA
YP_001670069.1	KEGG: pen:PSEEN1764 xanthine dehydrogenase, large subunit XhdB; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
YP_001670070.1	TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: pen:PSEEN1763 xanthine dehydrogenase accessory factor XdhC
YP_001670071.1	Catalyzes the deamination of guanine
YP_001670072.1	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure
YP_001670073.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1760 transcriptional regulator, GntR family
YP_001670074.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN1759 transporter
YP_001670075.1	TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: pen:PSEEN1686 transthyretin
YP_001670076.1	KEGG: pen:PSEEN1685 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase
YP_001670077.1	KEGG: pen:PSEEN1684 hypothetical protein
YP_001670078.1	catalyzes the formation of glyoxylate from (S)-ureidoglycolate
YP_001670079.1	PFAM: protein of unknown function DUF989; KEGG: pen:PSEEN1682 hypothetical protein
YP_001670080.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN1681 xanthine/uracil permease
YP_001670081.1	KEGG: pen:PSEEN1680 hypothetical protein
YP_001670082.1	KEGG: pen:PSEEN1679 hypothetical protein
YP_001670083.1	KEGG: pen:PSEEN1678 hypothetical protein
YP_001670084.1	PFAM: sulfatase; KEGG: pen:PSEEN1677 sulfatase
YP_001670085.1	PFAM: protein of unknown function DUF808; KEGG: pen:PSEEN1676 hypothetical protein
YP_001670086.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: pen:PSEEN1675 transcriptional regulator, TetR family
YP_001670087.1	PFAM: protein of unknown function DUF336; KEGG: pen:PSEEN1674 hypothetical protein
YP_001670088.1	catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate
YP_001670089.1	KEGG: pen:PSEEN1671 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel
YP_001670090.1	KEGG: pen:PSEEN1670 tartronic semialdehyde reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding
YP_001670091.1	PFAM: MOFRL domain protein; KEGG: pen:PSEEN1669 hydroxypyruvate reductase
YP_001670092.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001670093.1	PFAM: Urea transporter; KEGG: pen:PSEEN1667 transporter
YP_001670094.1	KEGG: psp:PSPPH_1154 YD repeat protein
YP_001670095.1	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: pen:PSEEN1666 cation transporter, VIC family
YP_001670096.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN1665 periplasmic thiosulfate-binding protein
YP_001670097.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pfo:Pfl_5033 MscS mechanosensitive ion channel
YP_001670098.1	KEGG: pen:PSEEN1664 hypothetical protein
YP_001670099.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN1663 hypothetical protein
YP_001670100.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN1662 transcriptional regulator, AsnC family
YP_001670101.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN1660 transporter, NCS1 nucleoside transporter family
YP_001670102.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: pen:PSEEN1659 hydantoin racemase
YP_001670103.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN1658 D-amino acid dehydrogenase, small subunit
YP_001670104.1	KEGG: pen:PSEEN1657 hypothetical protein
YP_001670105.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pen:PSEEN1656 FKBP-type peptidyl-prolyl cis-trans isomerase
YP_001670106.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A1705 putative 10 TMS drug/metabolite exporter, DME family, DMT super family
YP_001670107.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_5201 transcriptional regulator, LysR family
YP_001670108.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pen:PSEEN1655 hypothetical protein
YP_001670109.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pen:PSEEN3771 phenazine biosynthesis protein, PhzC/F family
YP_001670110.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pen:PSEEN3772 D-isomer specific 2-hydroxyacid dehydrogenase
YP_001670111.1	KEGG: pfo:Pfl_2415 hypothetical protein
YP_001670112.1	KEGG: pfo:Pfl_2415 hypothetical protein
YP_001670113.1	KEGG: pen:PSEEN3773 hypothetical protein
YP_001670114.1	KEGG: pen:PSEEN3774 cytochrome c-type biogenesis protein CycH; TIGRFAM: cytochrome c-type biogenesis protein CcmI; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001670115.1	PFAM: cytochrome C biogenesis protein; KEGG: pen:PSEEN3775 cytochrome c-type biogenesis protein CycL
YP_001670116.1	TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN3776 thiol:disulfide interchange protein DsbE
YP_001670117.1	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: pen:PSEEN3777 periplasmic cytochrome c-type biogenesis protein CcmF
YP_001670118.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
YP_001670119.1	TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); KEGG: pen:PSEEN3779 cytochrome c-type biogenesis protein CcmD
YP_001670120.1	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: pen:PSEEN3780 cytochrome c-type biogenesis protein CcmC; heme ABC export system, permease protein
YP_001670121.1	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: pen:PSEEN3781 heme ABC export system, permease protein CcmB
YP_001670122.1	ATP-binding protein; required for proper cytochrome c maturation
YP_001670123.1	KEGG: pen:PSEEN3783 hypothetical protein
YP_001670124.1	KEGG: pen:PSEEN3784 hypothetical protein
YP_001670125.1	KEGG: pen:PSEEN3785 hypothetical protein
YP_001670126.1	KEGG: pen:PSEEN3786 hypothetical protein
YP_001670127.1	PFAM: CheW domain protein; KEGG: pen:PSEEN3787 purine-binding chemotaxis protein CheW
YP_001670128.1	PFAM: CheW domain protein; KEGG: pen:PSEEN3788 hypothetical protein
YP_001670129.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN3789 ATPase, ParA family protein
YP_001670130.1	Homologous to MotB. These organism have both MotB and MotD. With MotC (a MotA homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. Either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility
YP_001670131.1	homologous to MotA; this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; these organisms have both MotA and MotC
YP_001670132.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_001670133.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: pen:PSEEN3793 chemotaxis histidine kinase CheA
YP_001670134.1	PFAM: Chemotaxis phosphatase CheZ; KEGG: pen:PSEEN3794 chemotactic response, CheY protein phophatase
YP_001670135.1	PFAM: response regulator receiver; KEGG: pen:PSEEN3795 chemotaxis protein CheY
YP_001670136.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes
YP_001670137.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN3797 flagellar number regulator FleN
YP_001670138.1	positive regulator of class III flagellar genes
YP_001670139.1	membrane protein involved in the flagellar export apparatus
YP_001670140.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_001670141.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_001670142.1	with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus
YP_001670143.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_001670144.1	PFAM: flagellar biosynthesis protein FliO; KEGG: pen:PSEEN3804 flagellar assembly protein FliO
YP_001670145.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001670146.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation
YP_001670147.1	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_001670148.1	PFAM: flagellar hook-length control protein; KEGG: pen:PSEEN3808 flagellar hook-length control protein FliK
YP_001670149.1	PFAM: Hpt domain protein; KEGG: pen:PSEEN3809 hypothetical protein
YP_001670150.1	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: pen:PSEEN3810 sensor histidine kinase/response regulator (hybrid)
YP_001670151.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pen:PSEEN3811 anti-sigma F factor antagonist
YP_001670152.1	rod/hook and filament chaperone
YP_001670153.1	involved in type III protein export during flagellum assembly
YP_001670154.1	binds to and inhibits the function of flagella specific ATPase FliI
YP_001670155.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001670156.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_001670157.1	forms a junction between the M-ring and FlgB during flagella biosynthesis
YP_001670158.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: pen:PSEEN3818 response regulator FleR
YP_001670159.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: pen:PSEEN3819 sensory box histidine kinase FleS
YP_001670160.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; flagellar regulatory FleQ domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN3820 transcriptional regulator FleQ
YP_001670161.1	KEGG: psp:PSPPH_3388 motility-related protein FliT
YP_001670162.1	flagellin specific chaperone
YP_001670163.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: psa:PST_1406 flagellar cap protein FliD
YP_001670164.1	PFAM: flagellar protein FlaG protein; KEGG: pfl:PFL_1630 flagellin FlaG
YP_001670165.1	PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: psa:PST_1404 flagellin type B
YP_001670166.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: pfo:Pfl_1524 3-oxoacyl-(acyl-carrier-protein) synthase III, putative
YP_001670167.1	With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook
YP_001670168.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
YP_001670169.1	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space
YP_001670170.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_001670171.1	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod
YP_001670172.1	makes up the distal portion of the flagellar basal body rod
YP_001670173.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod
YP_001670174.1	KEGG: pmy:Pmen_1706 hypothetical protein
YP_001670175.1	the hook connects flagellar basal body to the flagellar filament
YP_001670176.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production
YP_001670177.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_001670178.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella
YP_001670179.1	PFAM: MCP methyltransferase CheR-type; KEGG: pen:PSEEN3844 chemotaxis protein methyltransferase CheR
YP_001670180.1	PFAM: response regulator receiver; CheW domain protein; KEGG: pen:PSEEN3845 chemotaxis protein CheV
YP_001670181.1	required for the assembly of the flagellar basal body P-ring
YP_001670182.1	PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: pen:PSEEN3847 negative regulator of flagellin synthesis FlgM
YP_001670183.1	PFAM: FlgN family protein; KEGG: pen:PSEEN3848 flagella synthesis protein FlgN
YP_001670184.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN3849 hypothetical protein
YP_001670185.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3850 major facilitator family transporter
YP_001670186.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN3851 glutamine synthetase
YP_001670187.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN3852 transcriptional regulator BkdR
YP_001670188.1	PFAM: dehydrogenase E1 component; KEGG: pen:PSEEN3853 2-oxoisovalerate dehydrogenase, alpha subunit
YP_001670189.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: pen:PSEEN3854 2-oxoisovalerate dehydrogenase, beta subunit
YP_001670190.1	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: pen:PSEEN3855 2-oxoisovalerate dehydrogenase, lipoamide acyltransferase component
YP_001670191.1	E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001670192.1	KEGG: asa:ASA_4012 GGDEF domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001670193.1	KEGG: pen:PSEEN3857 hypothetical protein
YP_001670194.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pae:PA1269 probable transcriptional regulator
YP_001670195.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_6108 major facilitator superfamily MFS_1
YP_001670196.1	PFAM: dihydrodipicolinate synthetase; KEGG: pen:PSEEN4051 dihydrodipicolinate synthase
YP_001670197.1	PFAM: AzlC family protein; KEGG: hma:rrnAC1920 branched-chain amino acid transport protein AzlC
YP_001670198.1	PFAM: branched-chain amino acid transport; KEGG: pla:Plav_1961 branched-chain amino acid transport
YP_001670199.1	PFAM: amino acid permease-associated region; KEGG: bch:Bcen2424_4907 amino acid permease-associated region
YP_001670200.1	TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: pen:PSEEN3864 ATP-binding protein PhnN
YP_001670201.1	PFAM: Arc domain protein DNA binding domain protein; KEGG: pen:PSEEN3868 alginate biosynthesis transcriptional activator
YP_001670202.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: pen:PSEEN3870 magnesium transporter
YP_001670203.1	affects carbohydrate metabolism; has regulatory role in many processes
YP_001670204.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
YP_001670205.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001670206.1	catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism
YP_001670207.1	KEGG: pen:PSEEN3877 hypothetical protein
YP_001670208.1	catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation
YP_001670209.1	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH
YP_001670210.1	KEGG: pen:PSEEN3880 arginine succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit
YP_001670211.1	KEGG: pen:PSEEN3881 arginine succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine/ornithine succinyltransferase, alpha subunit; PFAM: arginine N-succinyltransferase beta subunit
YP_001670212.1	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate
YP_001670213.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3883 transcriptional regulator ArgR, AraC family
YP_001670214.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3884 arginine/ornithine transport ATP-binding protein AotP
YP_001670215.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3885 arginine/ornithine transport membrane protein AotM
YP_001670216.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN3886 arginine/ornithine transport protein AotQ (membrane)
YP_001670217.1	TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN3887 arginine/ornithine periplasmic-binding protein AotJ
YP_001670218.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_001670219.1	KEGG: pen:PSEEN3890 hypothetical protein
YP_001670220.1	PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: pen:PSEEN3891 phenylalanine hydroxylase gene cluster transcription activator
YP_001670221.1	phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin
YP_001670222.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
YP_001670223.1	KEGG: pen:PSEEN3441 protein-tyrosine phosphatase; autotransporter
YP_001670224.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN3896 transport protein (MFS family)
YP_001670225.1	PFAM: FAD linked oxidase domain protein; KEGG: pen:PSEEN3897 oxidase, FAD-binding
YP_001670226.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3898 transcriptional regulator, LysR family
YP_001670227.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN3899 aromatic amino acid transporter (APC family)
YP_001670228.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pen:PSEEN3900 ribosomal large subunit pseudouridine synthase B
YP_001670229.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: pen:PSEEN3901 hypothetical protein
YP_001670230.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: pen:PSEEN3902 hypothetical protein
YP_001670231.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: pen:PSEEN3903 hypothetical protein
YP_001670232.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pen:PSEEN3904 phosphoesterase (PHP family)
YP_001670233.1	Involved in cell division; probably involved in intracellular septation
YP_001670234.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
YP_001670235.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN3908 two-component response regulator
YP_001670236.1	PFAM: protein of unknown function Spy-related; KEGG: pen:PSEEN3909 hypothetical protein
YP_001670237.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN3910 sensor histidine kinase
YP_001670238.1	PFAM: nitroreductase; KEGG: pen:PSEEN3911 nitroreductase
YP_001670239.1	PFAM: cation transporter; KEGG: pen:PSEEN3912 potassium uptake protein, TrkH family
YP_001670240.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3913 transcriptional regulator, AraC family
YP_001670241.1	KEGG: pen:PSEEN3914 hypothetical protein
YP_001670242.1	PFAM: metallophosphoesterase; KEGG: pen:PSEEN3916 metallo-dependent phosphoesterase
YP_001670243.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3917 transcriptional regulator, AraC family
YP_001670244.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3918 hypothetical protein
YP_001670245.1	TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: pen:PSEEN3919 hypothetical protein
YP_001670246.1	PFAM: Patatin; surface antigen variable number repeat protein; KEGG: pen:PSEEN3920 hypothetical protein
YP_001670247.1	PFAM: regulatory protein MarR; KEGG: pen:PSEEN3921 transcriptional regulator, MarR family
YP_001670248.1	KEGG: pen:PSEEN3922 ATP-dependent DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases
YP_001670249.1	TIGRFAM: yecA family protein; KEGG: pen:PSEEN3923 hypothetical protein
YP_001670250.1	PFAM: protein of unknown function DUF454; KEGG: pen:PSEEN3924 hypothetical protein
YP_001670251.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN3927 type I secretion outer membrane protein, TolC
YP_001670252.1	PFAM: DTW domain containing protein; KEGG: pen:PSEEN3930 hypothetical protein
YP_001670253.1	KEGG: pen:PSEEN3931 aerotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: PAS domain containing protein
YP_001670254.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3932 transcriptional regulator, LysR family
YP_001670255.1	TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pen:PSEEN3933 agmatinase
YP_001670256.1	PFAM: Na+/solute symporter; KEGG: pen:PSEEN3934 sodium-solute symporter
YP_001670257.1	KEGG: pen:PSEEN3935 hypothetical protein
YP_001670258.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3936 transcriptional regulator, LysR family
YP_001670259.1	PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: pen:PSEEN3937 hypothetical protein
YP_001670260.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3940 hypothetical protein
YP_001670261.1	KEGG: pfl:PFL_1560 hypothetical protein
YP_001670262.1	TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: pen:PSEEN3938 hypothetical protein
YP_001670263.1	TIGRFAM: addiction module antidote protein; KEGG: pen:PSEEN3939 hypothetical protein
YP_001670264.1	KEGG: pen:PSEEN3948 hypothetical protein
YP_001670265.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN3951 ATP-dependent RNA helicase, DEAD box family
YP_001670266.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pen:PSEEN3952 transporter with mechanosensitive ion channel
YP_001670267.1	PFAM: Class I peptide chain release factor; KEGG: pen:PSEEN2056 protein chain release factor B
YP_001670268.1	PFAM: Auxin Efflux Carrier; KEGG: pmy:Pmen_0140 auxin efflux carrier
YP_001670269.1	TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN3958 transport protein
YP_001670270.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: pen:PSEEN3959 acyl carrier protein phosphodiesterase
YP_001670271.1	KEGG: pen:PSEEN3960 hypothetical protein
YP_001670272.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN3961 transcriptional regulator, LysR family
YP_001670273.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN3962 hydrolase, alpha/beta fold family
YP_001670274.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: pen:PSEEN3963 peptidyl-prolyl cis-trans isomerase A (rotamase A)
YP_001670275.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3964 ABC transporter, ATP-binding protein/permease protein
YP_001670276.1	PFAM: protein of unknown function DUF482; KEGG: pen:PSEEN3965 hypothetical protein
YP_001670277.1	KEGG: pen:PSEEN3966 hypothetical protein
YP_001670278.1	catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001670279.1	KEGG: pen:PSEEN3969 ATP-dependent helicase; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases
YP_001670280.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN3971 glutamine synthetase
YP_001670281.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN3972 oxidoreductase
YP_001670282.1	activates fatty acids by binding to coenzyme A; involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids
YP_001670283.1	Disruption of the fadD2 gene did not have any effect on the catabolism of acetic, butyric and longer fatty acids (aliphatic or aromatic); however, might be involved in the specific activation of other fatty acids and may be functional when FadD1 is inactivated.
YP_001670284.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN3976 hydrolase, alpha/beta fold family
YP_001670285.1	PFAM: MaoC domain protein dehydratase; KEGG: pen:PSEEN3977 enoyl-CoA hydratase, R-specific
YP_001670286.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Tetratricopeptide TPR_2 repeat protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN3978 RNA polymerase sigma-70 factor, ECF subfamily
YP_001670287.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pen:PSEEN3979 hypothetical protein
YP_001670288.1	PFAM: DGPFAETKE family protein; KEGG: pen:PSEEN3980 hypothetical protein
YP_001670289.1	KEGG: pen:PSEEN3981 hypothetical protein
YP_001670290.1	KEGG: pen:PSEEN4001 hypothetical protein
YP_001670291.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN4002 acetyltransferase, GNAT family
YP_001670292.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001670293.1	PFAM: ribonuclease BN; KEGG: pen:PSEEN4004 ribonuclease BN
YP_001670294.1	PFAM: CsbD family protein; KEGG: pen:PSEEN4005 hypothetical protein
YP_001670295.1	SMART: Parallel beta-helix repeat; KEGG: aci:ACIAD1714 3-dehydroshikimate dehydratase (DHS dehydratase) (DHSase)
YP_001670296.1	KEGG: pen:PSEEN4006 hypothetical protein
YP_001670297.1	SMART: RNA binding S1 domain protein; KEGG: pen:PSEEN4007 hypothetical protein
YP_001670298.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pfl:PFL_3315 outer membrane ferripyoverdine receptor
YP_001670299.1	PFAM: FecR protein; KEGG: pen:PSEEN2530 FecR-like transmembrane sensor
YP_001670300.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ecw:EcE24377A_4870 RNA polymerase sigma factor FecI
YP_001670301.1	KEGG: pen:PSEEN4008 lipoprotein
YP_001670302.1	KEGG: yen:YE3851 hypothetical protein
YP_001670303.1	catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol
YP_001670304.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4010 hypothetical protein
YP_001670305.1	KEGG: pfl:PFL_0005 hypothetical protein
YP_001670306.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4011 hypothetical protein
YP_001670307.1	PFAM: protein of unknown function DUF323; KEGG: pfl:PFL_4089 lipoprotein, putative
YP_001670308.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pau:PA14_33680 ferripyoverdine receptor
YP_001670309.1	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: pap:PSPA7_2859 linear gramicidin synthetase subunit D
YP_001670310.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: pfl:PFL_4094 non-ribosomal peptide synthetase
YP_001670311.1	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: psp:PSPPH_1926 pyoverdine sidechain peptide synthetase IV, D-Asp-L-Ser component
YP_001670312.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: pfl:PFL_4095 peptide synthase
YP_001670313.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: psb:Psyr_1956 pyoverdine biosynthesis regulatory gene, putative
YP_001670314.1	TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein; KEGG: pae:PA4922 azurin precursor
YP_001670315.1	KEGG: pen:PSEEN3224 pyoverdine ABC export system, permease/ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001670316.1	KEGG: pna:Pnap_4284 hypothetical protein
YP_001670317.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: pen:PSEEN4012 aspartyl/asparaginyl beta-hydroxylase
YP_001670318.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN4013 cysteine synthase A
YP_001670319.1	KEGG: pfl:PFL_1518 hypothetical protein
YP_001670320.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN4014 ATPase, AAA family
YP_001670321.1	KEGG: pen:PSEEN4015 hypothetical protein
YP_001670322.1	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: pen:PSEEN4016 allophanate hydrolase subunit 2
YP_001670323.1	PFAM: Allophanate hydrolase subunit 1; KEGG: pen:PSEEN4017 allophanate hydrolase subunit 1
YP_001670324.1	PFAM: LamB/YcsF family protein; KEGG: pen:PSEEN4018 hypothetical protein
YP_001670325.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN4019 transporter, MFS family
YP_001670326.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4020 transcriptional regulator, LysR family
YP_001670328.1	KEGG: pen:PSEEN4022 hypothetical protein
YP_001670329.1	PFAM: glutamine amidotransferase class-II; KEGG: pen:PSEEN4023 glutamine amidotransferase, class II
YP_001670330.1	KEGG: pen:PSEEN4024 hypothetical protein
YP_001670331.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: pen:PSEEN4025 peptidase, S9 family
YP_001670332.1	KEGG: pen:PSEEN4027 hypothetical protein
YP_001670333.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pfl:PFL_1503 hypothetical protein
YP_001670334.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pfo:Pfl_1395 tRNA/rRNA methyltransferase (SpoU)
YP_001670335.1	PFAM: Aldehyde Dehydrogenase; KEGG: rso:RSc2110 probable aldehyde dehydrogenase oxidoreductase protein
YP_001670336.1	PFAM: dihydrodipicolinate synthetase; KEGG: pau:PA14_09730 putative dihydrodipicolinate synthase
YP_001670337.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pau:PA14_09740 putative MFS transporter
YP_001670338.1	PFAM: FAD dependent oxidoreductase; KEGG: pau:PA14_09750 putative oxidoreductase
YP_001670339.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pau:PA14_09760 putative transcriptional regulator, GntR family
YP_001670340.1	TIGRFAM: GABA permease; PFAM: amino acid permease-associated region; KEGG: pen:PSEEN0737 amino acid permease
YP_001670341.1	KEGG: pfo:Pfl_1394 hypothetical protein
YP_001670342.1	KEGG: pen:PSEEN4030 hypothetical protein
YP_001670343.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN4031 hypothetical protein
YP_001670344.1	PFAM: nitroreductase; KEGG: pen:PSEEN4032 nitroreductase
YP_001670345.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pen:PSEEN4033 D-isomer specific 2-hydroxyacid dehydrogenase
YP_001670346.1	PFAM: protein of unknown function DUF709; KEGG: pen:PSEEN4034 hypothetical protein
YP_001670347.1	TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: pen:PSEEN4035 ribonuclease D, processes tRNA
YP_001670348.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: pen:PSEEN4036 transmembrane sulfatase
YP_001670349.1	KEGG: pen:PSEEN4038 hypothetical protein
YP_001670350.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pen:PSEEN4039 cystathionine gamma-synthase
YP_001670351.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN4041 transcriptional regulator, AsnC familiy
YP_001670352.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pen:PSEEN4042 molybdopterin oxidoreductase, alpha subunit
YP_001670353.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_001670354.1	PFAM: protein of unknown function UPF0187; KEGG: pen:PSEEN4044 hypothetical protein
YP_001670355.1	TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: pen:PSEEN4045 molybdopterin biosynthesis protein B
YP_001670356.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4046 transcriptional regulator, LysR family
YP_001670357.1	PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: pen:PSEEN4047 transcriptional regulator, AraC family
YP_001670358.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN4049 amino acid transporter
YP_001670359.1	PFAM: proline racemase; KEGG: pen:PSEEN4050 proline racemase
YP_001670360.1	PFAM: dihydrodipicolinate synthetase; KEGG: pen:PSEEN4051 dihydrodipicolinate synthase
YP_001670361.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN4052 ketoglutarate semialdehyde dehydrogenase
YP_001670362.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN4053 D-amino acid dehydrogenase, small subunit family protein
YP_001670363.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pen:PSEEN4054 xenobiotic reductase A
YP_001670364.1	PFAM: regulatory protein ArsR; KEGG: pen:PSEEN4055 transcriptional regulator, ArsR family
YP_001670365.1	PFAM: regulatory protein ArsR; LexA DNA-binding domain protein; Helix-turn-helix type 11 domain protein; KEGG: xau:Xaut_2681 putative transcriptional regulator
YP_001670366.1	KEGG: gme:Gmet_3376 hypothetical protein
YP_001670367.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_001670368.1	KEGG: pen:PSEEN4057 hypothetical protein
YP_001670369.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN3330 transporter, LysE family
YP_001670371.1	KEGG: mmu:100042292 similar to CG10953-PA
YP_001670372.1	PFAM: 17 kDa surface antigen; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: psp:PSPPH_0908 lipoprotein, putative
YP_001670373.1	PFAM: integrase family protein; KEGG: maq:Maqu_0395 phage integrase family protein
YP_001670374.1	PFAM: Prophage CP4-57 regulatory; KEGG: eli:ELI_04380 predicted transcriptional regulator
YP_001670375.1	KEGG: pna:Pnap_4284 hypothetical protein
YP_001670376.1	KEGG: rba:RB4971 hypothetical protein
YP_001670377.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain protein repeat-containing protein
YP_001670379.1	PFAM: SMC domain protein; KEGG: ljo:LJ1055 predicted ATP-dependent endonuclease of the OLD family
YP_001670380.1	PFAM: UvrD/REP helicase; KEGG: ljo:LJ1056 hypothetical protein
YP_001670383.1	KEGG: gur:Gura_2918 hypothetical protein
YP_001670384.1	KEGG: xcv:XCV2286 cytosine-specific DNA methyltransferase
YP_001670386.1	KEGG: swi:Swit_0194 hypothetical protein
YP_001670388.1	PFAM: Relaxase/mobilization nuclease family protein; KEGG: rme:Rmet_2839 hypothetical protein
YP_001670389.1	KEGG: psb:Psyr_4647 hypothetical protein
YP_001670390.1	KEGG: ses:SARI_03320 hypothetical protein
YP_001670391.1	KEGG: pfo:Pfl_3014 hypothetical protein
YP_001670392.1	KEGG: xau:Xaut_4002 hypothetical protein
YP_001670393.1	KEGG: pst:PSPTO_4696 ISPsy13, transposase OrfB
YP_001670394.1	KEGG: ajs:Ajs_0813 hypothetical protein
YP_001670396.1	PFAM: helix-turn-helix domain protein; KEGG: bpt:Bpet4560 predicted transcriptional regulator
YP_001670397.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: asa:ASA_P5G021 putative partition protein
YP_001670398.1	PFAM: helix-turn-helix domain protein; KEGG: pmy:Pmen_1180 putative transcriptional regulator, XRE family
YP_001670402.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_001670403.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN4062 beta-lactamase-like
YP_001670404.1	KEGG: pen:PSEEN4063 lipoprotein
YP_001670405.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_001670406.1	KEGG: pen:PSEEN4066 glycine cleavage system transcriptional repressor
YP_001670407.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN4067 hypothetical protein
YP_001670408.1	PFAM: protein of unknown function UPF0118; KEGG: pen:PSEEN4068 permease (PerM family)
YP_001670409.1	PFAM: SirA family protein; KEGG: pen:PSEEN4069 hypothetical protein
YP_001670410.1	PFAM: peptidase M48 Ste24p; KEGG: pen:PSEEN4070 peptidase M48 family
YP_001670411.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_001670412.1	PFAM: protein of unknown function DUF945; KEGG: pen:PSEEN4072 hypothetical protein
YP_001670413.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN4074 amino acid transport protein (APC family)
YP_001670414.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN4075 methyl-accepting chemotaxis transducer
YP_001670415.1	PFAM: cation efflux protein; KEGG: rpa:RPA2440 cation efflux protein
YP_001670416.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: pen:PSEEN4083 hypothetical protein
YP_001670417.1	PFAM: Radical SAM domain protein; KEGG: pen:PSEEN4084 radical activating enzyme
YP_001670418.1	TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: pen:PSEEN4085 hypothetical protein
YP_001670419.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN4086 peptidoglycan-associated lipoprotein precursor
YP_001670420.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_001670421.1	TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: pen:PSEEN4088 biopolymer transport protein TolA
YP_001670422.1	TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pen:PSEEN4089 biopolymer transport protein TolR
YP_001670423.1	TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: pen:PSEEN4090 biopolymer transport protein TolQ
YP_001670424.1	TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN4091 thioesterase
YP_001670425.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_001670426.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_001670427.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_001670428.1	PFAM: protein of unknown function DUF28; KEGG: pen:PSEEN4095 hypothetical protein
YP_001670429.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_001670430.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: pen:PSEEN4097 hypothetical protein
YP_001670431.1	KEGG: pen:PSEEN4098 hypothetical protein
YP_001670432.1	PFAM: Ferritin Dps family protein; KEGG: pen:PSEEN4099 DNA-binding stress protein, Dps family
YP_001670433.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pen:PSEEN4100 cold shock protein
YP_001670434.1	PFAM: SlyX family protein; KEGG: pen:PSEEN4101 hypothetical protein
YP_001670435.1	PFAM: histidine triad (HIT) protein; KEGG: pfo:Pfl_4417 histidine triad (HIT) protein
YP_001670436.1	PFAM: outer membrane porin; KEGG: pen:PSEEN4104 porin D
YP_001670437.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_001670438.1	KEGG: pen:PSEEN4106 lipoprotein
YP_001670439.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_001670440.1	PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: pen:PSEEN4110 hypothetical protein
YP_001670441.1	PFAM: virulence factor family protein; KEGG: pen:PSEEN4111 hypothetical protein
YP_001670442.1	PFAM: K potassium transporter; KEGG: pen:PSEEN4112 Kup system potassium uptake protein
YP_001670443.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_001670444.1	KEGG: eba:ebA177 hypothetical protein
YP_001670445.1	KEGG: eba:ebA176 hypothetical protein
YP_001670446.1	KEGG: eba:ebA175 hypothetical protein
YP_001670447.1	KEGG: pfo:Pfl_1971 hypothetical protein
YP_001670448.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN4114 acyltransferase, GNAT family
YP_001670449.1	PFAM: RNA-binding S4 domain protein; KEGG: pen:PSEEN4116 hypothetical protein
YP_001670450.1	PFAM: protein of unknown function DUF1456; KEGG: pen:PSEEN4117 hypothetical protein
YP_001670451.1	PFAM: protein of unknown function UPF0066; KEGG: pen:PSEEN4118 hypothetical protein
YP_001670452.1	involved in the transport of C4-dicarboxylates across the membrane
YP_001670453.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1346 sensor protein PhoQ
YP_001670454.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN1345 transcriptional regulatory protein PhoP
YP_001670455.1	KEGG: pen:PSEEN1343 outer membrane protein H1
YP_001670456.1	PFAM: dienelactone hydrolase; KEGG: pen:PSEEN1342 hydrolase; probable dienelactone hydrolase
YP_001670457.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: pen:PSEEN1341 phosphopantetheinyl transferase component of siderophore synthetase
YP_001670458.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1340 sensory histidine kinase
YP_001670459.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN1339 DNA-binding response regulator
YP_001670460.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001670462.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001670463.1	PFAM: outer membrane porin; KEGG: pen:PSEEN4363 porin, OprD family
YP_001670464.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: pst:PSPTO_1053 hypothetical protein
YP_001670465.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pmy:Pmen_3300 SMP-30/gluconolaconase/LRE domain protein
YP_001670466.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pfo:Pfl_3454 TRAP dicarboxylate transporter-DctP subunit
YP_001670467.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pfo:Pfl_3455 tripartite ATP-independent periplasmic transporter, DctQ component
YP_001670468.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: psp:PSPPH_0933 TRAP dicarboxylate transporter, DctM subunit
YP_001670469.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: psp:PSPPH_0932 hypothetical protein
YP_001670470.1	PFAM: Aldose 1-epimerase; KEGG: pst:PSPTO_1047 hypothetical protein
YP_001670471.1	PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO_5219 MFS transporter, phthalate permease family
YP_001670472.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1324 transcriptional regulator, LysR family
YP_001670473.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pen:PSEEN1322 oxidoreductase, FAD-binding
YP_001670474.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN1321 glutathione S-transferase
YP_001670475.1	TIGRFAM: yecA family protein; KEGG: pen:PSEEN1320 hypothetical protein
YP_001670476.1	PFAM: Asparaginase/glutaminase; KEGG: bov:BOV_1888 asparaginase family protein
YP_001670477.1	KEGG: aau:AAur_3986 putative integral membrane protein
YP_001670478.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: msm:MSMEG_2988 carbon-nitrogen hydrolase family protein
YP_001670480.1	KEGG: bxe:Bxe_C1245 tryptophan 2-monooxygenase
YP_001670481.1	catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis
YP_001670482.1	KEGG: pen:PSEEN1310 transporter, formate/nitrite family
YP_001670483.1	KEGG: pen:PSEEN1309 zinc-dependent hydrolase
YP_001670484.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: pen:PSEEN1308 hypothetical protein
YP_001670485.1	KEGG: pen:PSEEN1307 sensory box-containing diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE4 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001670486.1	KEGG: pen:PSEEN1306 hypothetical protein
YP_001670487.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1304 transcriptional regulator, LysR family
YP_001670488.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN1303 oxidoreductase, short-chain alcohol dehydrogenase/reductase family
YP_001670489.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN1300 efflux transporter, membrane fusion protein
YP_001670490.1	PFAM: protein of unknown function DUF1656; KEGG: pen:PSEEN1299 hypothetical protein
YP_001670491.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: pen:PSEEN1298 hypothetical protein
YP_001670492.1	KEGG: pen:PSEEN1297 hypothetical protein
YP_001670493.1	KEGG: pen:PSEEN1296 hypothetical protein
YP_001670494.1	KEGG: pen:PSEEN1295 hypothetical protein
YP_001670495.1	KEGG: pen:PSEEN1294 hypothetical protein
YP_001670496.1	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA
YP_001670497.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: pen:PSEEN1292 signal transduction protein; GGDEF/EAL domain
YP_001670498.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pen:PSEEN1291 3-hydroxyisobutyrate dehydrogenase
YP_001670499.1	KEGG: pen:PSEEN1288 hypothetical protein
YP_001670500.1	PFAM: Extracellular ligand-binding receptor; KEGG: pen:PSEEN1286 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001670501.1	PFAM: inner-membrane translocator; KEGG: pen:PSEEN1285 branched-chain amino acid ABC transporter, permease protein
YP_001670502.1	Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
YP_001670503.1	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
YP_001670504.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1282 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001670505.1	KEGG: pen:PSEEN1281 lipoprotein
YP_001670506.1	PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN1280 FAD-dependent dehydrogenases
YP_001670507.1	exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH
YP_001670508.1	PFAM: 17 kDa surface antigen; KEGG: pen:PSEEN1279 lipoprotein
YP_001670509.1	KEGG: pen:PSEEN1278 hypothetical protein
YP_001670510.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate
YP_001670511.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1276 outer membrane protein, OmpA family
YP_001670512.1	PFAM: beta-lactamase; KEGG: pen:PSEEN1275 beta-lactamase
YP_001670513.1	KEGG: pen:PSEEN1274 hydrolase
YP_001670514.1	helicase involved in DNA repair and perhaps also replication
YP_001670515.1	KEGG: pen:PSEEN1272 hypothetical protein
YP_001670516.1	KEGG: pen:PSEEN1234 hypothetical protein
YP_001670517.1	PFAM: protein of unknown function DUF1145; KEGG: pen:PSEEN1233 hypothetical protein
YP_001670518.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1232 outer memebrane protein, OmpA family
YP_001670519.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1231 outer membrane protein, OmpA family
YP_001670520.1	KEGG: pen:PSEEN1230 hypothetical protein
YP_001670521.1	PFAM: SEC-C motif domain protein; KEGG: pen:PSEEN1229 hypothetical protein
YP_001670522.1	SMART: Water Stress and Hypersensitive response domain protein; KEGG: pen:PSEEN1228 hypothetical protein
YP_001670523.1	PFAM: SEC-C motif domain protein; KEGG: pen:PSEEN1227 hypothetical protein
YP_001670524.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: psb:Psyr_4321 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_001670525.1	PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO_4774 hypothetical protein
YP_001670526.1	KEGG: psb:Psyr_4323 synthetase, putative
YP_001670527.1	KEGG: psb:Psyr_4324 serine O-acetyltransferase
YP_001670528.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: psb:Psyr_4325 regulatory protein, GntR:aminotransferase, class I and II
YP_001670529.1	PFAM: peptidase S45 penicillin amidase; KEGG: pen:PSEEN1226 penicillin amidase
YP_001670530.1	KEGG: pmy:Pmen_2196 exonuclease of the beta-lactamase fold involved in RNA processing-like protein
YP_001670531.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA
YP_001670532.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: pen:PSEEN1225 hypothetical protein
YP_001670533.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: pmy:Pmen_2194 DEAD/H associated domain protein
YP_001670534.1	KEGG: pmy:Pmen_2193 ICC-like phosphoesterase-like protein
YP_001670535.1	KEGG: pen:PSEEN1224 hypothetical protein
YP_001670536.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_001670537.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pen:PSEEN1222 cold shock protein CapB
YP_001670538.1	PFAM: protein of unknown function DUF59; KEGG: pen:PSEEN1221 ATPase, Mrp family
YP_001670539.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_001670540.1	KEGG: pen:PSEEN1219 electron transport complex protein RnfA
YP_001670541.1	TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: pen:PSEEN1217 electron transport complex protein RnfD
YP_001670542.1	TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: pen:PSEEN1216 electron transport complex protein RnfG
YP_001670543.1	KEGG: pen:PSEEN1215 hypothetical protein
YP_001670544.1	KEGG: pen:PSEEN1214 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_001670545.1	KEGG: pen:PSEEN1213 hypothetical protein
YP_001670546.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pen:PSEEN1212 response regulator, LuxR family
YP_001670547.1	KEGG: pen:PSEEN1211 hypothetical protein
YP_001670548.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_001670549.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN1209 outer membrane protein, OmpA/MotB family
YP_001670550.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_001670551.1	Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A)
YP_001670552.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pen:PSEEN1206 peroxiredoxin (alkyl hydroperoxide reductase C)
YP_001670553.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pen:PSEEN1205 bacterioferritin-associated ferredoxin Bfd
YP_001670554.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: pen:PSEEN1204 bacterioferritin
YP_001670555.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: pen:PSEEN1203 hypothetical protein
YP_001670556.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pen:PSEEN1202 oxidoreductase molybdopterin-binding
YP_001670557.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_001670558.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pen:PSEEN1200 ABC transporter, ATP-binding protein
YP_001670559.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pen:PSEEN1199 hypothetical protein
YP_001670560.1	TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: pen:PSEEN1198 glycerol uptake facilitator protein
YP_001670561.1	Converts glycerol and ADP to glycerol-3-phosphate and ADP
YP_001670562.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: pen:PSEEN1196 glycerol-3-phosphate regulon repressor
YP_001670563.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
YP_001670564.1	SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN1194 hypothetical protein
YP_001670565.1	PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN1193 glutamate/aspartate ABC transporter, periplasmic binding protein
YP_001670566.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1192 glutamate/aspartate ABC transporter, permease protein
YP_001670567.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1191 glutamate-aspartate ABC transporter, permease protein
YP_001670568.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN1190 glutamate-aspartate ABC transporter, ATP-binding protein
YP_001670569.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN1189 sensor histidine kinase
YP_001670570.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN1188 sigma-54 dependent response regulator
YP_001670571.1	PFAM: GlpM family protein; KEGG: pen:PSEEN1187 membrane protein required for efficient alginate biosynthesis
YP_001670572.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN1185 hydrolase, alpha/beta fold family
YP_001670573.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1184 transcriptional regulator MetR
YP_001670574.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN1183 hydrolase, MutT/NUDIX family protein
YP_001670575.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN1182 ATP-dependent DNA helicase Lhr
YP_001670576.1	PFAM: ferredoxin-dependent glutamate synthase; KEGG: pen:PSEEN1180 ferredoxin-dependent glutamate synthase
YP_001670577.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN1179 amino acid permease
YP_001670578.1	KEGG: pen:PSEEN1178 membrane carboxypeptidase (penicillin-binding protein)
YP_001670579.1	PFAM: transcriptional regulator PadR family protein; KEGG: pen:PSEEN1177 transcriptional regulator, PadR family
YP_001670580.1	PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: pen:PSEEN1176 iron-chelator utilization protein
YP_001670581.1	KEGG: pen:PSEEN1175 hypothetical protein
YP_001670582.1	KEGG: pen:PSEEN1174 hypothetical protein
YP_001670583.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN1173 TonB-dependent receptor
YP_001670584.1	PFAM: Carbohydrate-selective porin OprB; KEGG: pen:PSEEN1171 porin B precursor (outer membrane protein D1) (glucose porin)
YP_001670585.1	TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: pen:PSEEN1170 glucose dehydrogenase Gcd
YP_001670586.1	KEGG: pen:PSEEN4367 DNA-binding ATP-dependent protease La-2; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001670587.1	KEGG: pfl:PFL_4924 lipoprotein, putative
YP_001670588.1	KEGG: psb:Psyr_3990 hypothetical protein
YP_001670589.1	KEGG: plu:plu3075 hypothetical protein
YP_001670590.1	TIGRFAM: methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN4372 methyltransferase
YP_001670591.1	TIGRFAM: methyltransferase; PFAM: methyltransferase putative; Methyltransferase type 11; KEGG: pen:PSEEN4373 methyltransferase
YP_001670592.1	KEGG: pen:PSEEN4374 hypothetical protein
YP_001670593.1	TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN4285 heavy-metal DNA-binding response regulator CzrR
YP_001670594.1	KEGG: pen:PSEEN4286 heavy metal sensor histidine kinase; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein
YP_001670595.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_001670596.1	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA
YP_001670597.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_001670598.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_001670599.1	KEGG: pen:PSEEN4291 leader peptidase (signal peptidase I) , serine protease; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_001670600.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_001670601.1	KEGG: pen:PSEEN4293 serine protease MucD; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_001670602.1	PFAM: MucB/RseB family protein; KEGG: pen:PSEEN4294 sigma factor AlgU regulatory protein MucB
YP_001670603.1	PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: pen:PSEEN4295 sigma factor AlgU negative regulatory protein MucA
YP_001670604.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor regulates genes involved in alginate biosynthesis
YP_001670605.1	catalyzes the formation of oxaloacetate from L-aspartate
YP_001670608.1	PFAM: integrase family protein; KEGG: eca:ECA2306 probable phage integrase
YP_001670609.1	KEGG: pen:PSEEN4297 L-aspartate oxidase (quinolinate synthetase B)
YP_001670610.1	KEGG: pen:PSEEN4298 hypothetical protein
YP_001670611.1	PFAM: protein of unknown function DUF339; KEGG: pen:PSEEN4299 hypothetical protein
YP_001670612.1	TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: pen:PSEEN4300 hypothetical protein
YP_001670613.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN4301 hypothetical protein
YP_001670614.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: pen:PSEEN4302 sensor histidine kinase TctE
YP_001670615.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN4303 DNA-binding response regulator TctD
YP_001670616.1	PFAM: outer membrane porin; KEGG: pen:PSEEN4304 porin, OprD family
YP_001670617.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN4305 tricarboxylate transport protein TctC
YP_001670618.1	KEGG: pen:PSEEN4306 tricarboxylate transport protein TctB
YP_001670619.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: pen:PSEEN4307 tricarboxylate transport protein TctA
YP_001670620.1	TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: pen:PSEEN4308 ammonia monooxygenase
YP_001670621.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_001670622.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pen:PSEEN4313 enoyl-CoA hydratase/isomerase
YP_001670623.1	KEGG: pen:PSEEN4314 lipoprotein
YP_001670624.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN4315 diguanylate cyclase (GGDEF domain)
YP_001670625.1	KEGG: pen:PSEEN4316 hypothetical protein
YP_001670626.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pen:PSEEN4317 16S rRNA pseudouridylate 516 synthase
YP_001670627.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN4319 (R)-3-hydroxydecanoyl-ACP:CoA transacylase (3-hydroxyacyl-CoA-acyl carrier protein transferase)
YP_001670628.1	TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN4320 sulfate transporter
YP_001670629.1	KEGG: pen:PSEEN4330 hypothetical protein
YP_001670630.1	KEGG: pen:PSEEN4336 hypothetical protein
YP_001670631.1	PFAM: protein of unknown function DUF477; KEGG: pen:PSEEN4338 hypothetical protein
YP_001670632.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: pen:PSEEN4339 beta-D-glucoside glucohydrolase, periplasmic
YP_001670633.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN4340 sensor histidine kinase
YP_001670634.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: pen:PSEEN4341 sigma-54 dependent response regulator
YP_001670635.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN4342 dicarboxylate transport protein (MFS superfamily)
YP_001670636.1	PFAM: protein of unknown function DUF347; KEGG: pen:PSEEN4344 hypothetical protein
YP_001670637.1	KEGG: pen:PSEEN4345 hypothetical protein
YP_001670638.1	KEGG: pen:PSEEN4346 hypothetical protein
YP_001670639.1	KEGG: pen:PSEEN4347 hypothetical protein
YP_001670640.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pen:PSEEN4348 hypothetical protein
YP_001670641.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pen:PSEEN4349 transcriptional regulator, AraC family
YP_001670642.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pen:PSEEN4350 acetolactate synthase, large subunit
YP_001670643.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4351 transcriptional regulator, LysR family
YP_001670644.1	PFAM: NAD-dependent epimerase/dehydratase; TrkA-N domain protein; NmrA family protein; KEGG: pen:PSEEN4352 hypothetical protein
YP_001670645.1	PFAM: beta-lactamase domain protein; KEGG: pen:PSEEN4353 metallo-beta-lactamase superfamily protein
YP_001670646.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4354 transcriptional regulator, LysR family
YP_001670647.1	KEGG: pen:PSEEN4355 hypothetical protein
YP_001670648.1	KEGG: pen:PSEEN4356 carboxyphosphonoenolpyruvate phosphonomutase
YP_001670649.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4357 drug resistance transporter, EmrB/QacA family
YP_001670650.1	PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: pen:PSEEN4359 transcriptional regulator TtgR for multidrug efflux pump (TetR/AcrR family)
YP_001670651.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4360 multidrug/solvent efflux RND membrane fusion protein
YP_001670652.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN4361 multidrug/solvent RND transporter TtgB
YP_001670653.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN4362 multidrug/solvent efflux outer membrane protein TtgC, RND family
YP_001670654.1	PFAM: outer membrane porin; KEGG: pen:PSEEN4363 porin, OprD family
YP_001670655.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4364 transcriptional regulator, LysR family
YP_001670656.1	PFAM: protein of unknown function DUF962; KEGG: pen:PSEEN4366 hypothetical protein
YP_001670657.1	KEGG: pen:PSEEN1169 gamma-carboxymuconolactone decarboxylase (CMD); TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase
YP_001670658.1	TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN1168 3-oxoadipate enol-lactonase II (beta-ketoadipate enol-lactone hydrolase II)
YP_001670659.1	Catalyzes the cycloisomerization of cis,cis-muconate
YP_001670660.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN1166 dicarboxylic acid transport protein; alpha-ketoglutarate permease (MFS superfamily)
YP_001670661.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
YP_001670662.1	TIGRFAM: benzoate transport; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN1162 4-hydroxybenzoate transporter (MFS superfamily)
YP_001670663.1	TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pen:PSEEN1160 regulatory protein for pca operon (activator)
YP_001670664.1	KEGG: pen:PSEEN1158 hypothetical protein
YP_001670665.1	PFAM: phosphate transporter; KEGG: pen:PSEEN1157 low-affinity inorganic phosphate transporter
YP_001670666.1	PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: pen:PSEEN1155 hypothetical protein
YP_001670667.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN1154 methyl-accepting chemotaxis transducer
YP_001670668.1	PFAM: glycosyl transferase group 1; KEGG: pfo:Pfl_4432 glycosyl transferase, group 1
YP_001670669.1	KEGG: pfo:Pfl_4433 hypothetical protein
YP_001670670.1	PFAM: conserved hypothetical protein; KEGG: pfo:Pfl_4434 hypothetical protein
YP_001670671.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_001670672.1	KEGG: pen:PSEEN1151 transcriptional regulator MvaT, P16 subunit
YP_001670673.1	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates
YP_001670674.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN1149 hypothetical protein
YP_001670675.1	KEGG: pen:PSEEN1148 hypothetical protein
YP_001670676.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001670677.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN1146 ferredoxin reductase
YP_001670678.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: pen:PSEEN1145 fumarate hydratase, class I
YP_001670679.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pmy:Pmen_3270 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001670680.1	KEGG: pen:PSEEN1144 hypothetical protein
YP_001670681.1	PFAM: protein of unknown function DUF1486; KEGG: pmy:Pmen_3272 protein of unknown function DUF1486
YP_001670682.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pen:PSEEN1143 protease C56
YP_001670683.1	KEGG: pen:PSEEN1142 phospholipase
YP_001670684.1	PFAM: YceI family protein; KEGG: pen:PSEEN1141 hypothetical protein
YP_001670685.1	KEGG: pen:PSEEN1140 hypothetical protein
YP_001670686.1	PFAM: beta-lactamase; KEGG: pen:PSEEN1139 beta-lactamase
YP_001670687.1	KEGG: pen:PSEEN1138 hypothetical protein
YP_001670688.1	KEGG: pen:PSEEN1137 hypothetical protein
YP_001670689.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pen:PSEEN1136 acyltransferase
YP_001670690.1	PFAM: protein of unknown function DUF479; KEGG: pen:PSEEN1129 hypothetical protein
YP_001670691.1	PFAM: regulatory protein ArsR; KEGG: pen:PSEEN1128 transcriptional regulator (ArsR family)
YP_001670692.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pen:PSEEN1127 xenobiotic reductase B
YP_001670693.1	KEGG: pen:PSEEN1126 hypothetical protein
YP_001670694.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: pen:PSEEN1125 nucleoside-diphosphate-sugar epimerases
YP_001670695.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_001670696.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN1123 transporter, LysE family
YP_001670697.1	PFAM: manganese and iron superoxide dismutase; KEGG: pen:PSEEN1121 superoxide dismutase
YP_001670698.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pen:PSEEN1120 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domain)
YP_001670699.1	KEGG: pen:PSEEN1119 hypothetical protein
YP_001670700.1	PFAM: protein of unknown function DUF1111; KEGG: pen:PSEEN1117 hypothetical protein
YP_001670701.1	KEGG: pen:PSEEN1116 lipoprotein
YP_001670702.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN1115 hypothetical protein
YP_001670703.1	MexW; inner membrane protein; member of RND (resistance, nodulation, and division) family; involved in resistance to fluoroquinolones, tetracycline, chloramphenicol, erythromycin, ethidium bromide, and acriflavine; functions along with MexV and OprM
YP_001670704.1	KEGG: pen:PSEEN4454 hypothetical protein
YP_001670705.1	PFAM: lipopolysaccharide kinase; KEGG: pen:PSEEN4455 lipopolysaccharide kinase InaA
YP_001670706.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN4456 hypothetical protein
YP_001670707.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN4457 sensor histidine kinase ColS
YP_001670708.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN4458 response regulator ColR
YP_001670709.1	KEGG: pen:PSEEN4459 hypothetical protein
YP_001670710.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_001670711.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_001670712.1	F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein
YP_001670713.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pen:PSEEN4463 hypothetical protein
YP_001670714.1	KEGG: pen:PSEEN4464 hypothetical protein
YP_001670715.1	PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pen:PSEEN4465 methylated DNA-protein cysteine methyltransferase
YP_001670716.1	TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4466 muropeptide permease AmpG
YP_001670717.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4467 multidrug efflux MFS transporter
YP_001670718.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pen:PSEEN4468 ion small-conductance mechanosensitive channel
YP_001670719.1	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
YP_001670720.1	catalyzes the formation of 2-dehydropantoate from (R)-pantoate
YP_001670721.1	KEGG: pen:PSEEN4472 sensory box histidine kinase/response regulator (hybrid); TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001670722.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: pen:PSEEN4473 Cob(I)yrinic acid a,c-diamide adenosyltransferase
YP_001670723.1	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; thiamine monophosphate synthase; KEGG: pen:PSEEN4474 hydrolase MutT/NUDIX family/thiamine monophosphate synthase
YP_001670724.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN4475 glutathione S-transferase
YP_001670725.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_001670726.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins
YP_001670727.1	KEGG: pen:PSEEN4478 hypothetical protein
YP_001670728.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_001670729.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_001670730.1	PFAM: cell division protein FtsA; KEGG: pen:PSEEN4481 cell division protein FtsA
YP_001670731.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: pen:PSEEN4482 cell division protein FtsQ
YP_001670732.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_001670733.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_001670734.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_001670735.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: pen:PSEEN4486 cell division protein, stabililzes FtsZ ring
YP_001670736.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_001670737.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_001670738.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: pen:PSEEN4489 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme)
YP_001670739.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_001670740.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pen:PSEEN4491 penicillin-binding protein
YP_001670741.1	PFAM: cell division protein FtsL; KEGG: pen:PSEEN4492 cell division protein FtsL
YP_001670742.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: pen:PSEEN4493 S-adenosylmethionine methyltransferase MraW
YP_001670743.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_001670744.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pen:PSEEN4495 hypothetical protein
YP_001670745.1	PFAM: LppC family lipoprotein; KEGG: pen:PSEEN4496 lipoprotein LppC
YP_001670746.1	PFAM: protein of unknown function UPF0102; KEGG: pen:PSEEN4497 hypothetical protein
YP_001670747.1	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate
YP_001670748.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: pen:PSEEN4499 lipoprotein
YP_001670749.1	PFAM: protein of unknown function DUF903; KEGG: pen:PSEEN4500 hypothetical protein
YP_001670750.1	PFAM: Stringent starvation protein B; KEGG: pen:PSEEN4501 stringent starvation protein B
YP_001670751.1	PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN4502 stringent starvation protein A
YP_001670752.1	KEGG: pen:PSEEN4503 ubiquinol--cytochrome c reductase, cytochrome c1
YP_001670753.1	PFAM: Cytochrome b/b6 domain; KEGG: pen:PSEEN4504 ubiquinol--cytochrome c reductase, cytochrome b
YP_001670754.1	KEGG: pen:PSEEN4505 ubiquinol--cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein
YP_001670755.1	forms a direct contact with the tRNA during translation
YP_001670756.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_001670757.1	PFAM: aldo/keto reductase; KEGG: pen:PSEEN4508 oxidoreductase, aldo/keto reductase family
YP_001670758.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN4509 transcriptional regulator, AraC family
YP_001670759.1	PFAM: AFG1-family ATPase; KEGG: pen:PSEEN4510 ATPase
YP_001670760.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001670761.1	KEGG: pen:PSEEN4512 hypothetical protein
YP_001670762.1	PFAM: protein of unknown function DUF1043; KEGG: pen:PSEEN4513 hypothetical protein
YP_001670763.1	catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine
YP_001670764.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN4516 transcriptional regulator, AsnC family
YP_001670765.1	KEGG: pfo:Pfl_4761 S-type pyocin
YP_001670766.1	PFAM: Colicin immunity protein/pyocin immunity protein; KEGG: cko:CKO_02443 hypothetical protein
YP_001670767.1	in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis
YP_001670768.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_001670769.1	PFAM: protein of unknown function DUF34; KEGG: pen:PSEEN4520 hypothetical protein
YP_001670770.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: pen:PSEEN4521 HtrA-like serine protease AlgW
YP_001670771.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN4522 general amino acid ABC transporter, ATP-binding protein
YP_001670772.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN4523 general amino acid ABC transporter, permease protein
YP_001670773.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN4524 general amino acid ABC transporter, permease protein
YP_001670774.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN4525 general amino acid ABC transporter, periplasmic binding protein
YP_001670775.1	PFAM: phospholipase/Carboxylesterase; KEGG: pen:PSEEN4526 carboxylesterase
YP_001670776.1	enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation
YP_001670777.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: pen:PSEEN4528 molybdenum cofactor biosynthesis protein E
YP_001670778.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: pen:PSEEN4529 molybdenum cofactor biosynthesis protein D
YP_001670779.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_001670780.1	PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: pen:PSEEN4531 PhoH family protein
YP_001670781.1	PFAM: polysaccharide deacetylase; KEGG: pen:PSEEN4533 polysaccharide deacetylase family protein
YP_001670782.1	PFAM: protein of unknown function DUF328; KEGG: pen:PSEEN4534 hypothetical protein
YP_001670783.1	KEGG: pen:PSEEN4535 GDP-mannose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_001670784.1	KEGG: pen:PSEEN4536 glycosyl transferase Alg8
YP_001670785.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN4537 alginate biosynthesis protein Alg44
YP_001670786.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN4538 alginate biosynthesis precursor AlgK
YP_001670787.1	KEGG: pen:PSEEN4539 outer membrane protein AlgE
YP_001670788.1	SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: pen:PSEEN4540 alginate-C5-mannuronan-epimerase AlgG
YP_001670789.1	KEGG: pen:PSEEN4541 alginate biosynthesis protein AlgX
YP_001670790.1	Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export
YP_001670791.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: pen:PSEEN4543 alginate O-acetylation protein AlgI
YP_001670792.1	KEGG: pen:PSEEN4544 alginate O-acetylation protein AlgJ precursor
YP_001670793.1	KEGG: pen:PSEEN4545 alginate O-acetyltransferase AlgF
YP_001670794.1	KEGG: pen:PSEEN4546 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AlgA; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_001670795.1	KEGG: pen:PSEEN4547 hypothetical protein
YP_001670796.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN4551 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001670797.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN4552 multidrug efflux MFS outer membrane protein
YP_001670798.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4553 multidrug efflux MFS membrane fusion protein
YP_001670799.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4554 multidrug efflux MFS transporter
YP_001670800.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4555 transcriptional regulator, LysR family
YP_001670801.1	PFAM: UspA domain protein; KEGG: pen:PSEEN4556 universal stress protein family
YP_001670802.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4557 HlyD family secretion protein
YP_001670803.1	PFAM: protein of unknown function DUF1656; KEGG: pen:PSEEN4558 hypothetical protein
YP_001670804.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: pen:PSEEN4559 fusaric acid resistance protein
YP_001670805.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN4560 fusaric acid resistance protein
YP_001670806.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4561 transcriptional regulator, LysR family
YP_001670807.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pen:PSEEN4562 D-isomer specific 2-hydroxyacid dehydrogenase
YP_001670808.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4563 hypothetical protein
YP_001670809.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN4564 transcriptional regulator, AraC family
YP_001670810.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN4565 TonB-dependent siderophore receptor
YP_001670811.1	PFAM: FecR protein; KEGG: pen:PSEEN4566 FecR-like transmembrane sensor
YP_001670812.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN4567 RNA polymerase sigma-70 factor, ECF subfamily
YP_001670813.1	KEGG: pen:PSEEN4568 hypothetical protein
YP_001670814.1	PFAM: PepSY-associated TM helix domain protein; KEGG: pen:PSEEN4569 hypothetical protein
YP_001670815.1	KEGG: pen:PSEEN4570 hypothetical protein
YP_001670816.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas aeruginosa this protein may be involved in ferric dicitrate uptake
YP_001670817.1	PFAM: FecR protein; KEGG: pen:PSEEN4572 FecR-like transmembrane sensor
YP_001670818.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: pen:PSEEN4573 Fe(III) dicitrate transport protein FecA
YP_001670819.1	KEGG: pen:PSEEN4601 hypothetical protein
YP_001670820.1	KEGG: pen:PSEEN4602 hypothetical protein
YP_001670821.1	PFAM: phosphate-starvation-inducible E; KEGG: pen:PSEEN4603 hypothetical protein
YP_001670822.1	PFAM: YebG family protein; KEGG: pen:PSEEN4605 hypothetical protein
YP_001670823.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: pen:PSEEN4606 leucine dehydrogenase
YP_001670824.1	KEGG: pen:PSEEN4608 hypothetical protein
YP_001670825.1	TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: pen:PSEEN4610 maleylacetoacetate isomerase
YP_001670826.1	KEGG: pen:PSEEN4611 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969
YP_001670827.1	An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine
YP_001670828.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pen:PSEEN4613 transcriptional regulator, IclR family
YP_001670829.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN4615 oxidoreductase, short chain dehydrogenase/reductase family
YP_001670830.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN4616 hydrolase, alpha/beta fold family
YP_001670831.1	PFAM: LrgB family protein; KEGG: pen:PSEEN4617 effector of murein hydrolase LgrB
YP_001670832.1	PFAM: LrgA family protein; KEGG: pen:PSEEN4618 murein hydrolase transporter LgrA
YP_001670833.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4619 transcriptional regulator, LysR family
YP_001670834.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_001670835.1	KEGG: pfl:PFL_0954 sensory box protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001670836.1	KEGG: pen:PSEEN4621 hypothetical protein
YP_001670837.1	PFAM: regulatory protein MerR; KEGG: psa:PST_1977 transcriptional regulator, MerR family
YP_001670838.1	KEGG: pen:PSEEN4622 hypothetical protein
YP_001670839.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN4623 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001670840.1	PFAM: protein of unknown function DUF1244; KEGG: pen:PSEEN4624 hypothetical protein
YP_001670841.1	PFAM: HopJ type III effector protein; KEGG: pen:PSEEN4625 type III effector HopPmaJ
YP_001670842.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN4626 hydrolase, alpha/beta fold family
YP_001670843.1	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity
YP_001670844.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4628 transcriptional regulator, LysR family
YP_001670845.1	PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: pen:PSEEN4629 peptidylarginine deiminase, PPADH family
YP_001670846.1	TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN4630 carbon-nitrogen hydrolase
YP_001670847.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN4631 periplasmic polyamine-binding protein
YP_001670848.1	PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: pen:PSEEN4632 peptidylarginine deiminase, PPADH family
YP_001670849.1	PFAM: cytochrome B561; KEGG: pen:PSEEN4633 cytochrome b561 family protein
YP_001670850.1	KEGG: pen:PSEEN4634 hypothetical protein
YP_001670851.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001670852.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pen:PSEEN4636 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001670853.1	PFAM: Cobalamin-independent synthase MetE domain protein; KEGG: pen:PSEEN4639 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
YP_001670854.1	PFAM: methylenetetrahydrofolate reductase; KEGG: pen:PSEEN4641 methylenetetrahydrofolate reductase
YP_001670855.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pen:PSEEN0805 cobalamin synthesis protein/P47K family protein
YP_001670856.1	PFAM: protein of unknown function DUF466; KEGG: pen:PSEEN0804 hypothetical protein
YP_001670857.1	PFAM: carbon starvation protein CstA; KEGG: pen:PSEEN0803 carbon starvation protein CstA
YP_001670858.1	PFAM: type IV pilus assembly PilZ; KEGG: pen:PSEEN0802 hypothetical protein
YP_001670859.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pen:PSEEN0801 xanthine/uracil permease
YP_001670860.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_001670861.1	forms homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_001670862.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Ferric reductase NAD binding; KEGG: pen:PSEEN4772 ferredoxin--NADP+ reductase
YP_001670863.1	PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: pen:PSEEN4773 transcriptional regulator, LuxR family
YP_001670864.1	PFAM: methyltransferase small; KEGG: pen:PSEEN4774 nucleotide methyltransferase
YP_001670865.1	KEGG: pen:PSEEN4775 hypothetical protein
YP_001670866.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: pen:PSEEN4776 ubiquinol oxidase subunit II, cyanide insensitive
YP_001670867.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: pen:PSEEN4777 ubiquinol oxidase subunit I, cyanide insensitive
YP_001670868.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: pen:PSEEN4778 transporter, MFS family
YP_001670869.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pst:PSPTO_3654 acetyltransferase, GNAT family
YP_001670870.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pen:PSEEN4779 transporter
YP_001670871.1	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs
YP_001670872.1	KEGG: pen:PSEEN4783 protocatechuate 3,4-dioxygenase alpha chain (3,4-PCD); TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase
YP_001670873.1	TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: pen:PSEEN4784 protocatechuate 3,4-dioxygenase beta chain (3,4-PCD)
YP_001670874.1	PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: pen:PSEEN4786 zinc-dependent peptidase (neutral)
YP_001670875.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN0717 methyl-accepting chemotaxis transducer
YP_001670876.1	KEGG: pen:PSEEN0716 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001670877.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0715 transcriptional regulator, LysR family
YP_001670878.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pen:PSEEN0714 probable nitroreductase or quinone reductase
YP_001670879.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pen:PSEEN0713 hypothetical protein
YP_001670880.1	PFAM: protein of unknown function DUF81; KEGG: pfl:PFL_0767 hypothetical protein
YP_001670881.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_0715 transcriptional regulator, LysR family
YP_001670882.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: pen:PSEEN0704 hypothetical protein
YP_001670883.1	TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: psp:PSPPH_1885 hypothetical protein
YP_001670884.1	KEGG: psp:PSPPH_1886 hypothetical protein
YP_001670886.1	KEGG: pen:PSEEN0700 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding
YP_001670887.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN0699 methylmalonate-semialdehyde dehydrogenase, oxidoreductase protein
YP_001670888.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0698 transcriptional regulator, LysR family
YP_001670889.1	PFAM: OmpA/MotB domain protein; KEGG: pen:PSEEN0697 outer membrane lipoprotein (OmpA domain)
YP_001670890.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: pen:PSEEN0696 hypothetical protein
YP_001670891.1	KEGG: pen:PSEEN0695 hypothetical protein
YP_001670892.1	TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: pen:PSEEN0693 exonuclease V, alpha subunit
YP_001670893.1	TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: pen:PSEEN0692 exonuclease V, beta subunit
YP_001670894.1	TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: pen:PSEEN0691 exonuclease V, gamma subunit
YP_001670895.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
YP_001670896.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_001670897.1	KEGG: pen:PSEEN4708 phosphatidylserine synthase PssA; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_001670898.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_001670899.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_001670900.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
YP_001670901.1	PFAM: protein of unknown function DUF446; KEGG: pen:PSEEN4713 hypothetical protein
YP_001670902.1	KEGG: pen:PSEEN4714 hypothetical protein
YP_001670903.1	KEGG: pen:PSEEN4715 penicillin-binding protein 1B; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001670904.1	KEGG: pen:PSEEN4716 hypothetical protein
YP_001670905.1	PFAM: TfoX domain protein; KEGG: pen:PSEEN4718 hypothetical protein
YP_001670906.1	PFAM: protein of unknown function DUF399; KEGG: pen:PSEEN4719 hypothetical protein
YP_001670907.1	with HmuTU is involved in the transport of hemin
YP_001670908.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: pen:PSEEN4721 ABC transporter, permease component
YP_001670909.1	PFAM: periplasmic binding protein; KEGG: pen:PSEEN4722 ABC transporter, periplasmic binding protein
YP_001670910.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pen:PSEEN4723 iron-sulfur cluster-binding protein, Rieske family
YP_001670911.1	Regulatory factor involved in maltose metabolism
YP_001670912.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: pen:PSEEN4725 aminotransferase, class I
YP_001670913.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: pen:PSEEN4726 RNA polymerase-binding protein DksA
YP_001670914.1	this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu
YP_001670915.1	KEGG: pen:PSEEN4728 hypothetical protein
YP_001670916.1	TIGRFAM: PAS sensor protein; PFAM: Na+/solute symporter; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: pen:PSEEN4729 sensory box histidine kinase CrbA
YP_001670917.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN4730 response regulator CbrB
YP_001670918.1	KEGG: pen:PSEEN4733 poly(A) polymerase I (PAP); TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region
YP_001670919.1	KEGG: pen:PSEEN4734 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_001670920.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_001670921.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_001670922.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_001670923.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_001670924.1	KEGG: pen:PSEEN4739 hypothetical protein
YP_001670925.1	PFAM: protein of unknown function DUF748; KEGG: pen:PSEEN4740 hypothetical protein
YP_001670926.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN4741 ring-cleaving dioxygenase
YP_001670927.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pen:PSEEN4742 hypothetical protein
YP_001670928.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: pen:PSEEN0800 hypothetical protein
YP_001670929.1	KEGG: pen:PSEEN0799 polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (PNPase); PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_001670931.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_001670932.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_001670933.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_001670934.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_001670935.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_001670936.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_001670937.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: pen:PSEEN0792 preprotein translocase SecG subunit
YP_001670938.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_001670939.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_001670940.1	KEGG: pen:PSEEN0788 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_001670941.1	KEGG: pen:PSEEN0787 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001670942.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pen:PSEEN0786 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent
YP_001670943.1	PFAM: protein of unknown function UPF0044; KEGG: pen:PSEEN0785 hypothetical protein
YP_001670944.1	KEGG: pen:PSEEN0784 hypothetical protein
YP_001670945.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_001670946.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_001670947.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_001670948.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_001670949.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_001670950.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_001670951.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_001670952.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: pen:PSEEN0776 DNA repair protein RecN
YP_001670953.1	PFAM: ferric-uptake regulator; KEGG: pen:PSEEN0775 transcriptional repressor for ferric uptake
YP_001670954.1	PFAM: SmpA/OmlA domain protein; KEGG: pen:PSEEN0773 outer membrane lipoprotein OmlA
YP_001670955.1	PFAM: cyclase/dehydrase; KEGG: pen:PSEEN0771 hypothetical protein
YP_001670956.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_001670957.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN0769 transcriptional regulator, GntR family
YP_001670958.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: pen:PSEEN0768 L-lactate permease
YP_001670959.1	flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration
YP_001670960.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: pen:PSEEN0766 D-lactate deshydrogenase
YP_001670961.1	KEGG: pen:PSEEN0762 hypothetical protein
YP_001670962.1	PFAM: integrase family protein; KEGG: pmy:Pmen_1188 phage integrase family protein
YP_001670963.1	KEGG: har:HEAR1848 conserved hypothetical protein in putative prophage region
YP_001670964.1	KEGG: pmy:Pmen_1184 hypothetical protein
YP_001670965.1	KEGG: pmy:Pmen_1183 phage-related protein predicted endonuclease-like protein
YP_001670966.1	KEGG: pmy:Pmen_1182 hypothetical protein
YP_001670967.1	PFAM: DNA repair protein RadC; KEGG: pmy:Pmen_1181 DNA repair protein RadC
YP_001670968.1	PFAM: Restriction endonuclease EcoRII; KEGG: bfr:BF3682 type II restriction endonuclease
YP_001670969.1	TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: hha:Hhal_0413 DNA mismatch endonuclease vsr
YP_001670970.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: plu:plu0338 DNA-cytosine methyltransferase
YP_001670971.1	KEGG: psa:PST_3400 transposase-like protein TnpA3
YP_001670972.1	PFAM: HNH endonuclease; KEGG: kpn:KPN_04695 hypothetical protein
YP_001670973.1	KEGG: stp:Strop_0567 hypothetical protein
YP_001670974.1	KEGG: bfr:BF3682 type II restriction endonuclease
YP_001670975.1	KEGG: rci:LRC70 putative DNA/RNA helicase (SNF2 family); PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases
YP_001670976.1	KEGG: slo:Shew_1252 transposase
YP_001670977.1	PFAM: Prophage CP4-57 regulatory; KEGG: spc:Sputcn32_3522 phage transcriptional regulator, AlpA
YP_001670978.1	KEGG: pmy:Pmen_1158 hypothetical protein
YP_001670979.1	PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: hpy:HP0733 hypothetical protein
YP_001670980.1	KEGG: hpa:HPAG1_0715 labile enterotoxin output A
YP_001670982.1	KEGG: psa:PST_0849 predicted transcriptional regulator
YP_001670983.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mmw:Mmwyl1_3640 TonB-dependent siderophore receptor
YP_001670984.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0751 transport protein, MFS superfamily
YP_001670985.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0750 transcriptional regulator, LysR family
YP_001670986.1	PFAM: protein of unknown function DUF1016; KEGG: psb:Psyr_0608 protein of unknown function DUF1016
YP_001670987.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN0737 amino acid permease
YP_001670988.1	KEGG: pen:PSEEN0731 D-glucarate dehydratase; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein
YP_001670989.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN0730 transport protein, MFS superfamily
YP_001670990.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN0729 transcriptional regulator, GntR family
YP_001670991.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stt:t2116 ABC transporter ATP-binding protein
YP_001670992.1	PFAM: transport system permease protein; KEGG: pfl:PFL_3501 heme/hemin ABC transporter, permease protein
YP_001670993.1	PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_C7105 ABC Fe3+-hydroxamate transporter, periplasmic ligand binding protein
YP_001670994.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN0727 oxidoreductase, zinc-binding alcohol dehydrogenase
YP_001670995.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN0726 hydrolase, haloacid dehalogenase-like family
YP_001670996.1	KEGG: pen:PSEEN0725 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase
YP_001670997.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN0723 acetyltransferase, GNAT family
YP_001670998.1	PFAM: Phosphoglycerate mutase; KEGG: pen:PSEEN0722 hypothetical protein
YP_001670999.1	PFAM: histone deacetylase superfamily; KEGG: pen:PSEEN0720 hydrolase; histone deacetylase family protein
YP_001671000.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: pen:PSEEN0719 hypothetical protein
YP_001671001.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN0718 ATP-dependent RNA helicase, DEAD box family (RhlE)
YP_001671002.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4787 transporter
YP_001671003.1	KEGG: pfo:Pfl_4924 exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_001671004.1	PFAM: protein of unknown function DUF88; KEGG: pen:PSEEN4789 hypothetical protein
YP_001671005.1	KEGG: pen:PSEEN4790 hypothetical protein
YP_001671006.1	PFAM: protein of unknown function UPF0259; KEGG: pen:PSEEN4791 hypothetical protein
YP_001671008.1	TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; KEGG: pen:PSEEN4792 helicase, ATP-dependent
YP_001671009.1	KEGG: mmw:Mmwyl1_4223 hypothetical protein
YP_001671010.1	PFAM: integrase family protein; KEGG: pst:PSPTO_4746 site-specific recombinase, phage integrase family domain protein
YP_001671011.1	KEGG: pst:PSPTO_4747 hypothetical protein
YP_001671012.1	PFAM: integrase family protein; KEGG: pst:PSPTO_4748 site-specific recombinase, phage integrase family
YP_001671013.1	KEGG: pst:PSPTO_5591 ISPsy5, transposase
YP_001671014.1	PFAM: transposase IS66; KEGG: pst:PSPTO_5591 ISPsy5, transposase
YP_001671015.1	PFAM: IS66 Orf2 family protein; KEGG: pst:PSPTO_3221 ISPsy5, Orf1
YP_001671016.1	KEGG: pst:PSPTO_4755 hypothetical protein
YP_001671017.1	PFAM: RES domain protein; KEGG: neu:NE0745 hypothetical protein
YP_001671019.1	KEGG: psp:PSPPH_0671 prophage PSPPH01, ImpB/MucB/SamB family protein
YP_001671020.1	KEGG: xcb:XC_2789 hypothetical protein
YP_001671021.1	PFAM: protein of unknown function DUF262; KEGG: sse:Ssed_2266 DUF262
YP_001671022.1	KEGG: maq:Maqu_3373 hypothetical protein
YP_001671023.1	PFAM: protein of unknown function UPF0174; KEGG: pau:PA14_03370 hypothetical protein
YP_001671024.1	SMART: helix-turn-helix domain protein
YP_001671027.1	PFAM: metallophosphoesterase; KEGG: pst:PSPTO_0031 Ser/Thr protein phosphatase family protein
YP_001671029.1	PFAM: helix-turn-helix domain protein; KEGG: pst:PSPTO_4760 DNA-binding protein
YP_001671030.1	KEGG: psa:PST_0583 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases
YP_001671033.1	KEGG: hne:HNE_0069 hypothetical protein
YP_001671034.1	KEGG: psp:PSPPH_0607 hypothetical protein
YP_001671035.1	KEGG: xcb:XC_2441 hypothetical protein
YP_001671036.1	KEGG: xcb:XC_2442 hypothetical protein
YP_001671037.1	PFAM: KAP P-loop domain protein; KEGG: xcb:XC_2443 hypothetical protein
YP_001671039.1	PFAM: transposase IS4 family protein; KEGG: pst:PSPTO_4328 ISPs1, transposase OrfB
YP_001671040.1	KEGG: pst:PSPTO_4329 ISPs1, transposase OrfA
YP_001671042.1	KEGG: pen:PSEEN1852 sensory box-containing diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001671043.1	PFAM: transposase IS4 family protein; KEGG: psp:PSPPH_3329 ISPsy2, transposase
YP_001671044.1	KEGG: pst:PSPTO_4329 ISPs1, transposase OrfA
YP_001671045.1	PFAM: transposase IS4 family protein; KEGG: pst:PSPTO_4328 ISPs1, transposase OrfB
YP_001671046.1	SMART: DEAD-like helicase; KEGG: pst:PSPTO_4773 ATP-dependent helicase, N-terminal domain protein
YP_001671047.1	KEGG: pen:PSEEN4793 hypothetical protein
YP_001671048.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pen:PSEEN4794 cation efflux protein
YP_001671049.1	KEGG: pen:PSEEN4795 hypothetical protein
YP_001671050.1	PFAM: regulatory protein AsnC/Lrp family; regulatory protein MarR; KEGG: pen:PSEEN4796 transcriptional regulator, AsnC family
YP_001671051.1	KEGG: pen:PSEEN4797 hypothetical protein
YP_001671052.1	PFAM: pseudouridine synthase; KEGG: pen:PSEEN4798 pseudouridylate synthase
YP_001671053.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
YP_001671054.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN4800 acyl-CoA dehydrogenase (AidB)
YP_001671055.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: pen:PSEEN4801 sensor histidine kinase
YP_001671056.1	catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine
YP_001671057.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
YP_001671058.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_001671059.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN4805 hypothetical protein
YP_001671060.1	PFAM: Domain of unknown function DUF1820; KEGG: pmy:Pmen_3777 hypothetical protein
YP_001671061.1	PFAM: PhoH family protein; KEGG: pen:PSEEN4807 phosphate starvation-inducible protein (PhoH-like)
YP_001671062.1	PFAM: protein of unknown function UPF0054; KEGG: pen:PSEEN4808 hypothetical protein
YP_001671063.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: pen:PSEEN4809 magnesium and cobalt efflux protein CorC
YP_001671064.1	Transfers the fatty acyl group on membrane lipoproteins
YP_001671065.1	PFAM: protein of unknown function DUF218; KEGG: pen:PSEEN4811 hypothetical protein
YP_001671066.1	KEGG: pen:PSEEN4812 hypothetical protein
YP_001671067.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_001671068.1	PFAM: Rare lipoprotein B; KEGG: pen:PSEEN4814 lipoprotein, rare lipoprotein B family
YP_001671069.1	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA
YP_001671070.1	PFAM: protein of unknown function DUF331; KEGG: pen:PSEEN4816 hypothetical protein
YP_001671071.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: pen:PSEEN4817 membrane-bound lytic murein transglycosylase
YP_001671072.1	PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: pen:PSEEN4818 muramoyltetrapeptide carboxypeptidase
YP_001671073.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_001671074.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_001671075.1	PFAM: protein of unknown function DUF493; KEGG: pen:PSEEN4821 hypothetical protein
YP_001671076.1	PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: pen:PSEEN4822 D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5 (precursor)
YP_001671077.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: pen:PSEEN4823 lipoprotein, rare lipoprotein A family
YP_001671078.1	TIGRFAM: lytic murein transglycosylase B; KEGG: pen:PSEEN4824 membrane-bound lytic murein transglycosylase B
YP_001671079.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: pen:PSEEN4825 rod shape-determining protein
YP_001671080.1	KEGG: pen:PSEEN4826 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_001671081.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_001671082.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: pen:PSEEN4828 hypothetical protein
YP_001671083.1	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria
YP_001671084.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_001671085.1	responsible for recognizing base lesions in the genome and initiating base excision DNA repair
YP_001671086.1	PFAM: phosphoesterase PA-phosphatase related; SNARE associated Golgi protein; KEGG: pen:PSEEN4833 phosphatase, PAP2 family
YP_001671087.1	PFAM: peptidase S16 lon domain protein; KEGG: pen:PSEEN4834 ATP-dependent protease La domain protein
YP_001671088.1	PFAM: LrgB family protein; KEGG: pen:PSEEN4835 hypothetical protein
YP_001671089.1	PFAM: LrgA family protein; KEGG: pen:PSEEN4836 hypothetical protein
YP_001671090.1	PFAM: MaoC domain protein dehydratase; KEGG: pen:PSEEN4838 MaoC-like dehydratase
YP_001671091.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_001671092.1	TIGRFAM: MJ0042 family finger-like protein; KEGG: pen:PSEEN4860 hypothetical protein
YP_001671093.1	TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: pen:PSEEN4861 dihydrouridine synthase TIM-barrel protein nifR3
YP_001671094.1	Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription
YP_001671095.1	involved in de novo purine biosynthesis
YP_001671096.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_001671097.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: pen:PSEEN4865 sensor histidine kinase/response regulator (hybrid)
YP_001671098.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: pen:PSEEN4866 membrane protein, MarC family
YP_001671101.1	KEGG: pen:PSEEN4867 hypothetical protein
YP_001671102.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: pen:PSEEN4868 precorrin-3B C17-methyltransferase
YP_001671103.1	catalyzes the formation of precorrin-3 from precorrin-2
YP_001671104.1	catalyzes the interconversion of precorrin-8X and hydrogenobyrinate
YP_001671105.1	TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: pen:PSEEN4871 precorrin-3B synthase
YP_001671106.1	KEGG: pen:PSEEN4872 precorrin-6Y C5,15-methyltransferase (decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_001671107.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
YP_001671108.1	CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6
YP_001671109.1	PFAM: protein of unknown function DUF107; KEGG: pen:PSEEN4877 hypothetical protein
YP_001671110.1	PFAM: band 7 protein; KEGG: pen:PSEEN4878 hypothetical protein
YP_001671111.1	KEGG: pen:PSEEN4879 hypothetical protein
YP_001671112.1	PFAM: protein of unknown function DUF461; KEGG: pen:PSEEN4881 hypothetical protein
YP_001671113.1	KEGG: pen:PSEEN4882 hypothetical protein
YP_001671114.1	TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pen:PSEEN4883 outer membrane copper receptor OprC
YP_001671115.1	PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: pen:PSEEN4884 hypothetical protein
YP_001671116.1	involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine
YP_001671117.1	KEGG: pap:PSPA7_4058 probable carbohydrate binding domain
YP_001671118.1	TIGRFAM: urea ABC transporter, urea binding protein; KEGG: pen:PSEEN4888 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001671119.1	TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: pen:PSEEN4889 branched-chain amino acid ABC transporter, permease protein
YP_001671120.1	TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: pen:PSEEN4890 branched-chain amino acid ABC transporter, permease protein
YP_001671121.1	TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: pen:PSEEN4891 branched-chain amino acid transport ABC transporter, ATP-binding component
YP_001671122.1	KEGG: pen:PSEEN4892 branched-chain amino acid ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001671123.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN4893 acetyltransferase, GNAT family
YP_001671124.1	KEGG: pen:PSEEN4895 hypothetical protein
YP_001671125.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: pen:PSEEN4896 curved DNA-binding protein
YP_001671126.1	KEGG: pen:PSEEN4897 heat-shock protein, HSP70 family
YP_001671127.1	KEGG: pen:PSEEN4898 hypothetical protein
YP_001671128.1	PFAM: PsiF repeat protein; KEGG: pen:PSEEN4899 protein induced by phosphate starvation
YP_001671129.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN4900 transcriptional regulator, AraC family
YP_001671130.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN4902 hypothetical protein
YP_001671131.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN4903 triacylglycerol lipase
YP_001671132.1	osmotically-inducible lipoprotein E; activator of ntr-like gene protein
YP_001671133.1	PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: pen:PSEEN4905 bacterioferritin
YP_001671134.1	PFAM: AsmA family protein; KEGG: pen:PSEEN4906 hypothetical protein
YP_001671135.1	KEGG: pen:PSEEN4907 hypothetical protein
YP_001671136.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN4908 transcriptional regulator, TetR family
YP_001671137.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: pen:PSEEN4909 mannose-6-phosphate isomerase
YP_001671138.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN4911 oxidoreductase, short chain dehydrogenase/reductase family
YP_001671139.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN4913 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001671140.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN4914 branched-chain amino acid ABC transporter, ATP-binding protein
YP_001671141.1	PFAM: inner-membrane translocator; KEGG: pen:PSEEN4915 branched-chain amino acid ABC transporter, permease protein
YP_001671142.1	PFAM: inner-membrane translocator; KEGG: pfo:Pfl_0553 inner-membrane translocator
YP_001671143.1	PFAM: Extracellular ligand-binding receptor; KEGG: pen:PSEEN4917 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001671144.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_001671145.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_001671146.1	TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein; KEGG: pen:PSEEN4921 azurin
YP_001671147.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN4924 hypothetical protein
YP_001671148.1	PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pen:PSEEN4925 Fe-S oxidase, SAM-binding
YP_001671149.1	KEGG: psp:PSPPH_0325 hypothetical protein
YP_001671150.1	unwinds double stranded DNA
YP_001671151.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_001671152.1	KEGG: pen:PSEEN4928 hypothetical protein
YP_001671153.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_001671154.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_001671155.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: pen:PSEEN4932 RNA methyltransferase, TrmH family, group 3
YP_001671156.1	KEGG: pen:PSEEN4933 exoribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein
YP_001671157.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN4935 iron ABC transporter, periplasmic iron-binding protein
YP_001671158.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN4936 iron ABC transporter, permease protein
YP_001671159.1	KEGG: kla:KLLA0F24948g unnamed protein product
YP_001671160.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN4937 methyl-accepting chemotaxis transducer
YP_001671161.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_001671162.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
YP_001671163.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: pen:PSEEN4940 HflC protein
YP_001671164.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: pen:PSEEN4941 HflK protein
YP_001671165.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: pen:PSEEN4942 hypothetical protein
YP_001671166.1	Stimulates the elongation of poly(A) tails
YP_001671167.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_001671168.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YP_001671169.1	PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: pen:PSEEN4946 N-acetylmuramoyl-L-alanine amidase
YP_001671170.1	PFAM: protein of unknown function UPF0079; KEGG: pen:PSEEN4947 hypothetical protein
YP_001671171.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; KEGG: pen:PSEEN4948 hypothetical protein
YP_001671172.1	TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: pen:PSEEN4949 iron-sulfur cluster-binding protein
YP_001671173.1	PFAM: protein of unknown function UPF0126; KEGG: pen:PSEEN4953 hypothetical protein
YP_001671174.1	3'-5' exoribonuclease specific for small oligoribonuclotides
YP_001671175.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
YP_001671176.1	KEGG: pen:PSEEN4956 hypothetical protein
YP_001671177.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_001671178.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_001671179.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN4959 hypothetical protein
YP_001671180.1	PFAM: Rhodanese domain protein; KEGG: pen:PSEEN4960 thiosulfate sulfurtransferase (rhodanese-like protein)
YP_001671181.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_001671182.1	KEGG: pen:PSEEN4962 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase type 3
YP_001671183.1	KEGG: pen:PSEEN4963 hypothetical protein
YP_001671184.1	PFAM: protein of unknown function DUF330; KEGG: pen:PSEEN4964 hypothetical protein
YP_001671185.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001671186.1	KEGG: pen:PSEEN4967 hypothetical protein
YP_001671187.1	KEGG: pen:PSEEN4968 hypothetical protein
YP_001671188.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001671189.1	PFAM: protein of unknown function UPF0227; KEGG: pen:PSEEN4970 hypothetical protein
YP_001671190.1	PFAM: metallophosphoesterase; Calcineurin phosphoesterase domain protein; KEGG: pen:PSEEN4971 metallo-phosphoesterase
YP_001671191.1	PFAM: protein of unknown function DUF1249; KEGG: pen:PSEEN4972 hypothetical protein
YP_001671192.1	PFAM: NUDIX hydrolase; KEGG: pen:PSEEN4973 hydrolase, MutT/NUDIX family
YP_001671193.1	KEGG: pen:PSEEN4975 lipoprotein
YP_001671194.1	TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pen:PSEEN4976 transporter, NCS1 nucleoside transporter family
YP_001671195.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_001671196.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN4979 type I efflux secretion system outer membrane protein, TolC
YP_001671197.1	catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A
YP_001671198.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN4981 transcriptional regulator, LysR family
YP_001671199.1	PFAM: small multidrug resistance protein; KEGG: pen:PSEEN4982 multidrug efflux SMR transporter
YP_001671200.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN4983 oxidase, FAD-binding
YP_001671201.1	PFAM: aldo/keto reductase; KEGG: pen:PSEEN4984 oxidoreductase, aldo/keto reductase family
YP_001671202.1	KEGG: pen:PSEEN4985 hypothetical protein
YP_001671203.1	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose
YP_001671204.1	KEGG: pen:PSEEN4987 lipid A export ATP-binding/permease protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001671205.1	PFAM: O-antigen polymerase; KEGG: pen:PSEEN4988 lipopolysaccharide core biosynthesis protein
YP_001671206.1	KEGG: pen:PSEEN4989 toluene tolerance protein Ttg8
YP_001671207.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN4990 glycosyl transferase
YP_001671208.1	KEGG: pen:PSEEN4991 hypothetical protein
YP_001671209.1	KEGG: pen:PSEEN4992 hypothetical protein
YP_001671210.1	PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein
YP_001671211.1	PFAM: Mig-14 family protein; KEGG: pen:PSEEN4994 hypothetical protein
YP_001671212.1	PFAM: glycosyl transferase group 1; KEGG: pen:PSEEN4995 glycosyl transferase
YP_001671213.1	PFAM: Carbamoyltransferase; KEGG: pen:PSEEN4996 carbamoyltransferase, NodU family
YP_001671214.1	PFAM: protein of unknown function DUF519; KEGG: pen:PSEEN4997 hypothetical protein
YP_001671215.1	TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: pen:PSEEN4998 major sodium:proline symporter (SSS family)
YP_001671216.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein
YP_001671217.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pen:PSEEN5004 probable acyl-CoA dehydrogenase
YP_001671218.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: pen:PSEEN5005 peptidase, TldD/PmbA family
YP_001671219.1	KEGG: pen:PSEEN5006 hypothetical protein
YP_001671220.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN5007 drug resistance transporter, EmrB/QacA family
YP_001671221.1	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA
YP_001671222.1	PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN5009 hypothetical protein
YP_001671223.1	TIGRFAM: hypothetical membrane protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: pen:PSEEN5010 hypothetical protein
YP_001671224.1	KEGG: pen:PSEEN5011 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001671225.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_5776 acetyltransferase, GNAT family
YP_001671226.1	KEGG: pen:PSEEN5015 hypothetical protein
YP_001671227.1	PFAM: protein of unknown function DUF45; KEGG: pen:PSEEN5016 hypothetical protein
YP_001671228.1	KEGG: pen:PSEEN5017 sensory box protein/response regulator (hybrid); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001671229.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_001671230.1	KEGG: pen:PSEEN5020 lipoprotein
YP_001671231.1	KEGG: pen:PSEEN5021 hypothetical protein
YP_001671232.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_001671233.1	KEGG: pen:PSEEN5023 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: D-erythrose-4-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001671234.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_001671235.1	PFAM: regulatory protein ArsR; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN5025 transcriptional regulator, ArsR family
YP_001671236.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_001671237.1	this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+
YP_001671238.1	PFAM: protein of unknown function DUF1090; KEGG: pen:PSEEN5028 hypothetical protein
YP_001671239.1	KEGG: pen:PSEEN5029 cytochrome c'
YP_001671240.1	PFAM: MltA domain protein; 3D domain protein; KEGG: pen:PSEEN5030 outer membrane-bound lytic murein transglycolase A
YP_001671241.1	KEGG: pen:PSEEN5031 hypothetical protein
YP_001671242.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: pen:PSEEN5032 hypothetical protein
YP_001671243.1	PFAM: sodium/hydrogen exchanger; KEGG: pen:PSEEN5033 Na+/H+ antiporter
YP_001671244.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN5034 long-chain acyl-CoA thioester hydrolase family protein
YP_001671245.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_001671246.1	KEGG: pen:PSEEN5038 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_001671247.1	KEGG: pap:PSPA7_0529 hypothetical protein
YP_001671248.1	SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN5040 periplasmic binding protein
YP_001671249.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pen:PSEEN5042 ATP-dependent RNA helicase RhlE, DEAD box family
YP_001671250.1	PFAM: YceI family protein; KEGG: pen:PSEEN5043 hypothetical protein
YP_001671251.1	PFAM: cytochrome B561; KEGG: pen:PSEEN5044 cytochrome, b561 family
YP_001671252.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: pen:PSEEN5045 flavin-containing monamine oxidase family protein
YP_001671253.1	KEGG: pen:PSEEN5046 hypothetical protein
YP_001671254.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
YP_001671255.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_001671256.1	TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: pen:PSEEN5049 hemolysin III
YP_001671257.1	PFAM: CheW domain protein; KEGG: pen:PSEEN5050 chemotaxis protein
YP_001671258.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: pen:PSEEN5051 sensor histidine kinase/response regulator ChpA
YP_001671259.1	PFAM: chemotaxis sensory transducer; KEGG: pen:PSEEN5052 type IV pili methyl-accepting chemotaxis transducer PilJ
YP_001671260.1	PFAM: CheW domain protein; KEGG: pen:PSEEN5053 type IV pili signal transduction protein PilI
YP_001671261.1	PFAM: response regulator receiver; KEGG: pen:PSEEN5054 type IV pili response regulator PilH
YP_001671262.1	PFAM: response regulator receiver; KEGG: pen:PSEEN5055 type IV pili response regulator PilG
YP_001671263.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_001671264.1	TIGRFAM: TonB family protein; KEGG: pen:PSEEN5057 hypothetical protein
YP_001671265.1	PFAM: protein of unknown function DUF179; KEGG: pen:PSEEN5058 hypothetical protein
YP_001671266.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_001671267.1	regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity
YP_001671268.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_001671269.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_001671270.2	heat shock protein involved in degradation of misfolded proteins
YP_001671271.1	heat shock protein involved in degradation of misfolded proteins
YP_001671272.1	PFAM: protein of unknown function DUF971; KEGG: pen:PSEEN5065 hypothetical protein
YP_001671273.1	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class II; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: pen:PSEEN5066 poly(3-hydroxyalkanoate) polymerase 1
YP_001671274.1	TIGRFAM: poly(3-hydroxyalkanoate) depolymerase; PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN5067 poly(3-hydroxyalkanoate) depolymerase
YP_001671275.1	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class II; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: pen:PSEEN5068 poly(3-hydroxyalkanoate) polymerase 2
YP_001671276.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN5069 transcriptional regulator, TetR family
YP_001671277.1	TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: pen:PSEEN5070 polyhydroxyalkanoate synthesis protein PhaF
YP_001671278.1	TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: pen:PSEEN5071 polyhydroxyalkanoate granule-associated protein GA1
YP_001671279.1	KEGG: pen:PSEEN0376 hypothetical protein
YP_001671280.1	TIGRFAM: polyhydroxyalkanoic acid system protein; PFAM: Putative polyhydroxyalkanoic acid system protein; KEGG: pen:PSEEN5072 hypothetical protein
YP_001671281.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
YP_001671282.1	PFAM: Sterol-binding domain protein; KEGG: pen:PSEEN5074 hypothetical protein
YP_001671283.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: pen:PSEEN5075 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
YP_001671284.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
YP_001671285.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
YP_001671286.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_001671287.1	Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif
YP_001671288.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: pen:PSEEN5080 twin aqrginine translocase protein subunit C
YP_001671289.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_001671290.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5082 methyl-accepting chemotaxis transducer
YP_001671291.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: pen:PSEEN5084 methyl-accepting chemotaxis transducer
YP_001671292.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN5085 amino acid ABC transporter, ATP-binding protein
YP_001671293.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5086 amino acid ABC transporter, permease protein
YP_001671294.1	PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pen:PSEEN5087 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001671295.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_001671296.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_001671297.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_001671298.1	KEGG: pen:PSEEN5092 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold
YP_001671299.1	PFAM: N-formylglutamate amidohydrolase; KEGG: pen:PSEEN5093 N-formylglutamate amidohydrolase
YP_001671300.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_001671301.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN5095 amino acid transporter
YP_001671302.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_001671303.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_001671304.1	PFAM: protein of unknown function DUF886; KEGG: pen:PSEEN5098 hypothetical protein
YP_001671305.1	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pen:PSEEN5099 histidine utilization repressor
YP_001671306.1	catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate
YP_001671307.1	PFAM: Lipocalin family protein; KEGG: pen:PSEEN5102 outer membrane lipoprotein Blc
YP_001671308.1	KEGG: pen:PSEEN5103 lipoprotein
YP_001671309.1	PFAM: protein of unknown function DUF924; KEGG: pen:PSEEN5105 hypothetical protein
YP_001671310.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_001671311.1	KEGG: pen:PSEEN5107 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_001671312.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN5108 hypothetical protein
YP_001671315.1	KEGG: bte:BTH_II1428 hypothetical protein
YP_001671316.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: pen:PSEEN0392 regulatory protein TypA
YP_001671317.1	Required for the synthesis of the thiazole moiety
YP_001671318.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: pfl:PFL_0386 glutamine synthetase, type I
YP_001671319.1	TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: pen:PSEEN0389 chorismate mutase
YP_001671320.1	KEGG: pen:PSEEN0387 sensory box histidine kinase NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001671321.1	KEGG: pen:PSEEN0386 two-component response regulator NtrC; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001671322.1	KEGG: pen:PSEEN0385 hypothetical protein
YP_001671323.1	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pen:PSEEN0384 RNA methyltransferase, TrmH family, group 2
YP_001671324.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_001671325.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: pen:PSEEN0382 glutaredoxin
YP_001671326.1	PFAM: Rhodanese domain protein; KEGG: pen:PSEEN0381 hypothetical protein
YP_001671327.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_001671328.1	PFAM: peptidase M23B; KEGG: pen:PSEEN0379 metalloendopeptidase, M23/M37 family
YP_001671329.1	KEGG: pen:PSEEN0378 carboxy-terminal processing protease precursor; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001671330.1	PFAM: protein of unknown function DUF610 YibQ; KEGG: pen:PSEEN0377 hypothetical protein
YP_001671331.1	KEGG: pen:PSEEN0376 hypothetical protein
YP_001671332.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: pen:PSEEN0375 choline transporter BetT
YP_001671333.1	HTH-type; bet1; Repressor involved in choline regulation of the bet genes
YP_001671334.1	catalyzes the formation of betaine from betaine aldehyde
YP_001671335.1	catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine
YP_001671336.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
YP_001671337.1	small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS
YP_001671338.1	PFAM: protein of unknown function UPF0061; KEGG: pen:PSEEN0369 hypothetical protein
YP_001671339.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pen:PSEEN0368 thioredoxin
YP_001671340.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN0365 chromosome partitioning protein, ParA family
YP_001671341.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN0342 transcriptional regulator, LysR family
YP_001671342.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN0341 transporter, MFS superfamily
YP_001671343.1	PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0340 hypothetical protein
YP_001671344.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_001671345.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_001671346.1	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate
YP_001671347.1	PFAM: Sporulation domain protein; KEGG: pen:PSEEN0336 hypothetical protein
YP_001671348.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_001671349.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_001671350.1	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: pen:PSEEN0333 type IV pili biogenesis protein PilQ
YP_001671351.1	KEGG: pen:PSEEN0332 type IV pili biogenesis protein PilP
YP_001671352.1	PFAM: Fimbrial assembly family protein; KEGG: pen:PSEEN0331 type IV pili biogenesis protein PilN
YP_001671353.1	KEGG: pen:PSEEN0330 type IV pili biogenesis protein PilM
YP_001671354.1	KEGG: pen:PSEEN0328 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001671355.1	PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: pen:PSEEN0327 bifunctional protein (MaeB) [includes: malic oxidoreductase N-terminal; phosphotransacetylase C-terminal]
YP_001671356.1	PFAM: nuclease (SNase domain protein); KEGG: pen:PSEEN0326 nuclease, staphylococcal nuclease homologue
YP_001671357.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_001671358.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
YP_001671359.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_001671360.1	PFAM: Sporulation domain protein; KEGG: pen:PSEEN0322 hypothetical protein
YP_001671361.1	PFAM: TM2 domain containing protein?; KEGG: pen:PSEEN0321 hypothetical protein
YP_001671362.1	PFAM: NLP/P60 protein; KEGG: pen:PSEEN0320 hypothetical protein
YP_001671363.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: pen:PSEEN0319 type IV pili twitching motility protein PilT
YP_001671364.1	PFAM: alanine racemase domain protein; KEGG: pen:PSEEN0318 hypothetical protein
YP_001671365.1	catalyzes the formation of L-proline from pyrroline-5-carboxylate
YP_001671366.1	PFAM: protein of unknown function YGGT; KEGG: pen:PSEEN0316 hypothetical protein
YP_001671367.1	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine
YP_001671368.1	TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN0314 methionine biosynthesis protein MetW
YP_001671369.1	KEGG: pen:PSEEN0313 hypothetical protein
YP_001671370.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_001671371.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001671372.1	KEGG: pen:PSEEN0310 hypothetical protein
YP_001671373.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_001671374.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_001671375.1	with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate
YP_001671376.1	PFAM: protein of unknown function DUF423; KEGG: pen:PSEEN0305 hypothetical protein
YP_001671377.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
YP_001671378.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_001671379.1	PFAM: protein of unknown function DUF214; KEGG: pen:PSEEN0302 cell division protein FtsX
YP_001671380.1	KEGG: pen:PSEEN0301 cell division ATP binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001671381.1	KEGG: pen:PSEEN0300 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001671382.1	PFAM: peptidase M16 domain protein; KEGG: pen:PSEEN0299 zinc-dependent peptidase, M16 family
YP_001671383.1	PFAM: peptidase M16 domain protein; KEGG: pen:PSEEN0298 zinc-dependent peptidase, M16 family
YP_001671384.1	TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN0297 methyltransferase
YP_001671385.1	PFAM: peptidase M16 domain protein; KEGG: pmy:Pmen_4176 peptidase M16 domain protein
YP_001671386.1	PFAM: peptidase M16 domain protein; KEGG: psp:PSPPH_4783 peptidase, M16 family
YP_001671387.1	PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN0296 hydrolase, alpha/beta superfamily
YP_001671388.1	PFAM: Rhodanese domain protein; KEGG: pen:PSEEN0295 thiosulfate sulfurtransferase (rhodanese-like protein)
YP_001671389.1	PFAM: regulatory protein TetR; KEGG: pen:PSEEN0294 transcriptional regulator, TetR family
YP_001671390.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN0293 coniferyl aldehyde dehydrogenase (CALDH)
YP_001671391.1	KEGG: pen:PSEEN0292 hypothetical protein
YP_001671392.1	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: pen:PSEEN0291 oxidoreductase, GMC family
YP_001671393.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_001671394.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pen:PSEEN0289 ferredoxin 4Fe-4S
YP_001671395.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_001671396.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN0286 hypothetical protein
YP_001671397.1	KEGG: pen:PSEEN0284 hypothetical protein
YP_001671398.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_001671399.1	KEGG: pen:PSEEN0280 hypothetical protein
YP_001671400.1	KEGG: pen:PSEEN0278 hypothetical protein
YP_001671401.1	PFAM: sodium:dicarboxylate symporter; KEGG: pen:PSEEN0277 sodium:dicarboxylate symporter
YP_001671402.1	PFAM: dihydrofolate reductase region; KEGG: pen:PSEEN0273 dihydrofolate reductase type I, trimethoprim resistance
YP_001671403.1	KEGG: pen:PSEEN0272 hypothetical protein
YP_001671404.1	PFAM: GTP-binding protein HSR1-related; KEGG: pen:PSEEN0271 hypothetical protein
YP_001671405.1	TIGRFAM: metal dependent phophohydrolase; phosphonate degradation operons associated HDIG domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: pen:PSEEN0270 hypothetical protein
YP_001671406.1	TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN0269 ABC transporter, periplasmic binding protein
YP_001671407.1	TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN0268 ABC transporter, permease protein
YP_001671408.1	KEGG: pen:PSEEN0267 ABC transporter, ATP-binding protein; TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding protein component; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001671409.1	TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5231 transcriptional regulator, LysR family
YP_001671410.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pen:PSEEN5232 cadmium translocating P-type ATPase
YP_001671411.1	TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pen:PSEEN5233 transcriptional regulator CadR
YP_001671412.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_001671413.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_001671414.1	PFAM: protein of unknown function DUF81; KEGG: pen:PSEEN5236 hypothetical protein
YP_001671415.1	PFAM: protein of unknown function DUF833; KEGG: pen:PSEEN5237 hypothetical protein
YP_001671416.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: pen:PSEEN5238 phosphoenolpyruvate-protein phosphotransferase
YP_001671417.1	hydrolyzes diadenosine polyphosphate
YP_001671418.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN5240 hydrolase, haloacid dehalogenase-like family
YP_001671419.1	KEGG: pen:PSEEN5241 hypothetical protein
YP_001671420.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_001671421.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_001671422.1	PFAM: SdiA-regulated domain protein; KEGG: pen:PSEEN5244 hypothetical protein
YP_001671423.1	PFAM: SdiA-regulated domain protein; KEGG: pen:PSEEN5245 hypothetical protein
YP_001671424.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pen:PSEEN5246 fumarylacetoacetate (FAA) hydrolase
YP_001671425.1	PFAM: FAD linked oxidase domain protein; KEGG: pen:PSEEN5247 FAD/FMN-containing dehydrogenase
YP_001671426.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_001671427.1	KEGG: pen:PSEEN5249 hypothetical protein
YP_001671428.1	KEGG: pen:PSEEN5250 periplasmic binding protein from ABC-type transporter
YP_001671429.1	PFAM: protein of unknown function DUF523; KEGG: pfo:Pfl_5390 protein of unknown function DUF523
YP_001671430.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: pen:PSEEN5252 oxidoreductase, 2OG-Fe(II) oxygenase family
YP_001671431.1	KEGG: pen:PSEEN5253 hypothetical protein
YP_001671432.1	KEGG: pen:PSEEN5254 lipase
YP_001671433.1	KEGG: pen:PSEEN5255 hypothetical protein
YP_001671434.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: pen:PSEEN5256 acetyltransferase
YP_001671435.1	PFAM: peptidase S45 penicillin amidase; KEGG: pen:PSEEN5257 penicillin amidase
YP_001671436.1	PFAM: extracellular solute-binding protein family 3; KEGG: pen:PSEEN5258 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_001671437.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN5259 amino acid ABC transporter, ATP-binding protein
YP_001671438.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5260 amino acid ABC transporter, permease protein
YP_001671439.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5261 amino acid ABC transporter, permease protein
YP_001671440.1	PFAM: NLPA lipoprotein; KEGG: pen:PSEEN5262 lipoprotein
YP_001671441.1	PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: pen:PSEEN5263 sigma-54 dependent transcriptional regulator
YP_001671442.1	PFAM: protein of unknown function DUF1234; KEGG: pen:PSEEN5264 hypothetical protein
YP_001671443.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pen:PSEEN5278 biopolymer transport protein ExbD/TolR
YP_001671444.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: pen:PSEEN5279 biopolymer transport protein ExbB
YP_001671445.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: pen:PSEEN5280 TonB-like protein
YP_001671446.1	KEGG: pen:PSEEN5281 sulfate/thiosulfate import ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001671447.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5282 sulfate/thiosulfate import ABC transporter, membrane protein
YP_001671448.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5283 sulfate/thiosulfate import ABC transporter, membrane protein
YP_001671449.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5284 sulfate/thiosulfate import ABC transporter, periplasmic sulfate-binding protein
YP_001671450.1	KEGG: pfl:PFL_0191 hypothetical protein
YP_001671451.1	PFAM: acriflavin resistance protein; KEGG: pen:PSEEN5287 Acr-type multidrug efflux transporter (RND family)
YP_001671452.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN5288 multidrug RND transporter, membrane fusion protein
YP_001671453.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN5289 multidrug RND transporter, membrane fusion protein
YP_001671454.1	KEGG: pen:PSEEN3227 hypothetical protein
YP_001671455.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5291 putrescine ABC transporter, permease protein
YP_001671456.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5292 putrescine ABC transporter, permease protein
YP_001671457.1	KEGG: pen:PSEEN5293 puttaive putrescine ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001671458.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5294 putrescine ABC transporter, periplasmic putrescine-binding protein
YP_001671459.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5295 putrescine ABC transporter, periplasmic putrescine-binding protein
YP_001671460.1	PFAM: aminotransferase class-III; KEGG: pen:PSEEN5296 aminotransferase, class III
YP_001671461.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN5297 glutamine synthetase
YP_001671462.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN5299 glutamine synthetase
YP_001671463.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
YP_001671464.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis
YP_001671465.1	PFAM: adenylate cyclase; KEGG: pen:PSEEN5302 adenylate cyclase
YP_001671466.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN5303 transcriptional regulator, AsnC family
YP_001671467.1	KEGG: pen:PSEEN5304 hypothetical protein
YP_001671468.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: pen:PSEEN5305 type II secretion system protein E
YP_001671469.1	TIGRFAM: conserverd hypothetical protein; PFAM: conserved hypothetical protein; KEGG: pen:PSEEN5306 hypothetical protein
YP_001671470.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_001671471.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_001671472.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_001671473.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5310 iron ABC transporter, permease protein
YP_001671474.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5311 iron ABC transporter, periplasmic iron-binding protein
YP_001671475.1	catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
YP_001671476.1	KEGG: pen:PSEEN5313 hypothetical protein
YP_001671477.1	Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone
YP_001671478.1	PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: pen:PSEEN5315 aminopeptidase P
YP_001671479.1	the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown
YP_001671480.1	KEGG: pen:PSEEN5317 hypothetical protein
YP_001671481.1	PFAM: protein of unknown function DUF710; KEGG: pen:PSEEN5318 hypothetical protein
YP_001671482.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: pen:PSEEN5319 5-formyltetrahydrofolate cyclo-ligase
YP_001671483.1	KEGG: pen:PSEEN5320 hypothetical protein
YP_001671484.1	PFAM: protein of unknown function DUF55; KEGG: pfo:Pfl_5440 protein of unknown function DUF589
YP_001671485.1	PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN5322 membrane fusion protein
YP_001671486.1	PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: pen:PSEEN5323 ribosome-associated ATPase, ATP-binding domain (N-terminal)
YP_001671487.1	PFAM: ABC-2 type transporter; KEGG: pen:PSEEN5324 ABC transporter, permease protein
YP_001671488.1	PFAM: flagellar basal body-associated protein FliL; KEGG: pen:PSEEN5325 flagellar basal body-associated protein FliL
YP_001671489.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN5326 alcohol dehydrogenase, zinc-containing
YP_001671490.1	PFAM: ChaC family protein; KEGG: pen:PSEEN5327 transporter, ChaC-related
YP_001671491.1	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose
YP_001671492.1	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: pen:PSEEN5330 3-octaprenyl-4-hydroxybenzoate decarboxylase
YP_001671493.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_001671494.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pfo:Pfl_5457 thioredoxin
YP_001671495.1	PFAM: Ppx/GppA phosphatase; KEGG: pen:PSEEN5335 exopolyphosphatase (ExopolyPase) (metaphosphatase)
YP_001671496.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_001671497.1	PFAM: fatty acid hydroxylase; KEGG: pen:PSEEN5339 hypothetical protein
YP_001671498.1	PFAM: ThiJ/PfpI domain protein; KEGG: pen:PSEEN5340 enhancing lycopene biosynthesis protein 2
YP_001671499.1	PFAM: protein of unknown function DUF188; KEGG: pen:PSEEN5341 hypothetical protein
YP_001671500.1	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP
YP_001671501.1	Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation
YP_001671502.1	PFAM: protein of unknown function DUF1289; KEGG: pen:PSEEN5362 hypothetical protein
YP_001671503.1	defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly
YP_001671504.1	KEGG: pen:PSEEN5364 lipoprotein Lppl
YP_001671505.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pen:PSEEN5365 diaminopimelate decarboxylase
YP_001671506.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_001671507.1	PFAM: protein of unknown function DUF484; KEGG: pen:PSEEN5367 hypothetical protein
YP_001671508.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_001671509.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pen:PSEEN5369 haloacid dehalogenase-like hydrolase
YP_001671510.1	KEGG: pen:PSEEN5374 hypothetical protein
YP_001671511.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: pen:PSEEN5375 ammonium transporter
YP_001671512.1	PFAM: nitrogen regulatory protein P-II; KEGG: pen:PSEEN5376 nitrogen regulatory protein P-II
YP_001671513.1	PFAM: protein of unknown function DUF526; KEGG: pen:PSEEN5377 hypothetical protein
YP_001671514.1	PFAM: AIG2 family protein; KEGG: pfl:PFL_5193 hypothetical protein
YP_001671515.1	PFAM: TOBE domain protein; KEGG: pen:PSEEN5378 molybdenum-pterin binding protein
YP_001671516.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN5383 hypothetical protein
YP_001671517.1	KEGG: pen:PSEEN5385 magnesium chelatase subunit D; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001671518.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pen:PSEEN5389 glutathione-regulated potassium-proton antiporter
YP_001671519.1	KEGG: pen:PSEEN5391 hypothetical protein
YP_001671520.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN5397 isochorismatase
YP_001671521.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5393 transcriptional regulator, LysR family
YP_001671522.1	PFAM: Amidohydrolase 3; KEGG: pen:PSEEN5394 puttaive metal-dependent hydrolase; amidohydrolase family
YP_001671523.1	KEGG: pen:PSEEN5396 hypothetical protein
YP_001671524.1	PFAM: isochorismatase hydrolase; KEGG: pen:PSEEN5397 isochorismatase
YP_001671525.1	PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: pen:PSEEN5400 small-conductance mechanosensitive channel
YP_001671526.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN5401 oxidoreductase, FAD-binding
YP_001671527.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN5402 probable aldehyde dehydrogenase
YP_001671528.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5404 transcriptional regulator, LysR family
YP_001671529.1	PFAM: protein of unknown function DUF1338; KEGG: pen:PSEEN5405 hypothetical protein
YP_001671530.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5407 transcriptional regulator, LysR family
YP_001671531.1	functions as a Na(+)/drug antiporter
YP_001671532.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pen:PSEEN5409 diguanylate cyclase (GGDEF domain)
YP_001671533.1	TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: pen:PSEEN5410 ATP-dependent DNA helicase
YP_001671534.1	Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine
YP_001671535.1	KEGG: pen:PSEEN5412 hypothetical protein
YP_001671536.1	KEGG: pen:PSEEN5413 cytochrome c5
YP_001671537.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: pen:PSEEN5414 transcriptional regulator
YP_001671538.1	catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA
YP_001671539.1	catalyzes the oxidative deamination of D-amino acids
YP_001671540.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: pen:PSEEN5417 leucine-responsive regulatory protein
YP_001671541.1	PFAM: protein of unknown function UPF0153; KEGG: pen:PSEEN5418 hypothetical protein
YP_001671542.1	PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN5419 oxidoreductase; D-amino acid dehydrogenase
YP_001671543.1	KEGG: pen:PSEEN5420 hypothetical protein
YP_001671544.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN5421 transcriptional regulator, GntR family
YP_001671545.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: pen:PSEEN5422 phospholipase D/transphosphatidylase
YP_001671546.1	PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN5423 major facilitator family transporter
YP_001671547.1	PFAM: Aldehyde Dehydrogenase; KEGG: pen:PSEEN5424 aldehyde dehydrogenase
YP_001671548.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: pen:PSEEN5425 hypothetical protein
YP_001671549.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_001671550.1	required for 70S ribosome assembly
YP_001671551.1	PFAM: extracellular solute-binding protein family 5; KEGG: pen:PSEEN5430 periplasmic binding protein
YP_001671552.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_001671553.1	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine
YP_001671554.1	catalyzes the formation of dUMP from dUTP
YP_001671555.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: pen:PSEEN5434 phosphomannomutase
YP_001671556.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_001671557.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001671558.1	TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pen:PSEEN5437 catabolite repression control protein Crc
YP_001671559.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_001671560.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: pen:PSEEN5440 hypothetical protein
YP_001671561.1	Essential for recycling GMP and indirectly, cGMP
YP_001671562.1	PFAM: amino acid permease-associated region; KEGG: pen:PSEEN5442 amino acid transporter
YP_001671563.1	PFAM: peptidase C26; KEGG: pen:PSEEN5443 glutamine amidotransferase
YP_001671564.1	PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN5444 glutamine synthetase
YP_001671565.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5445 transcriptional regulator, LysR family
YP_001671566.1	Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_001671567.1	KEGG: pen:PSEEN5447 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_001671568.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: pfo:Pfl_5552 YjgF-like protein
YP_001671569.1	KEGG: pen:PSEEN5449 lipoprotein
YP_001671570.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: pen:PSEEN5450 hypothetical protein
YP_001671571.1	TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: pen:PSEEN5451 solvent/drug/ferric siderophore transport protein ExbB
YP_001671572.1	membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell
YP_001671573.1	TIGRFAM: TonB family protein; KEGG: pen:PSEEN5453 ferric siderophore transport system, periplasmic binding protein TonB
YP_001671574.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5454 transcriptional regulator, LysR family
YP_001671575.1	catalyzes branch migration in Holliday junction intermediates
YP_001671576.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: pen:PSEEN5456 hypothetical protein
YP_001671577.1	KEGG: pen:PSEEN5457 hypothetical protein
YP_001671578.1	PFAM: histone family protein DNA-binding protein; KEGG: pen:PSEEN5458 DNA-binding protein HU-alpha
YP_001671579.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN5459 rubredoxin-NAD(+) reductase
YP_001671580.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pen:PSEEN5460 rubredoxin
YP_001671581.1	PFAM: Chorismate lyase; KEGG: pen:PSEEN5461 chorismate-pyruvate lyase
YP_001671582.1	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway
YP_001671583.1	PFAM: Secreted repeat of unknown function; KEGG: pen:PSEEN5463 hypothetical protein
YP_001671584.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pen:PSEEN5464 phosphate regulon transcriptional regulatory protein PhoB
YP_001671585.1	TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: pen:PSEEN5465 phosphate regulon sensor protein PhoR
YP_001671586.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: pen:PSEEN5466 metal ion transporter
YP_001671587.1	PFAM: peptidase M23B; KEGG: pen:PSEEN5467 peptidase, M23/M37 family
YP_001671588.1	PFAM: response regulator receiver; KEGG: pen:PSEEN5468 response regulator
YP_001671589.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: pen:PSEEN5469 transcriptional repressor for high affinity phosphate uptake
YP_001671590.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_001671591.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5471 phosphate ABC transporter, permease protein
YP_001671592.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN5472 phosphate ABC transporter, permease protein
YP_001671593.1	TIGRFAM: phosphate binding protein; KEGG: pen:PSEEN5473 phosphate ABC transporter, periplasmic phosphate-binding protein
YP_001671594.1	PFAM: S-type Pyocin domain protein; KEGG: pfo:Pfl_5397 S-type pyocin
YP_001671595.1	PFAM: S-type Pyocin domain protein; KEGG: psb:Psyr_0310 HNH endonuclease:S-type Pyocin
YP_001671596.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pen:PSEEN5474 permease (MFS superfamily)
YP_001671597.1	PFAM: thioesterase superfamily protein; KEGG: pfo:Pfl_5617 thioesterase superfamily
YP_001671598.1	PFAM: Aldose 1-epimerase; KEGG: pen:PSEEN5476 aldose 1-epimerase
YP_001671599.1	KEGG: pen:PSEEN5477 hypothetical protein
YP_001671600.1	PFAM: Transglycosylase-associated protein; KEGG: pen:PSEEN5478 hypothetical protein
YP_001671601.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_001671602.1	KEGG: pen:PSEEN5480 phosphoribosylaminoimidazole carboxylase, mutase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_001671603.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5481 transcriptional regulator, LysR family
YP_001671604.1	catalyzes the formation of fumarate from aspartate
YP_001671605.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN5487 transcriptional regulator, AraC family
YP_001671606.1	PFAM: histone deacetylase superfamily; KEGG: pen:PSEEN5488 acetylpolyamine aminohydrolase
YP_001671607.1	PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN5489 ABC transporter, periplasmic polyamine-binding protein
YP_001671608.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pen:PSEEN5491 transcriptional regulator, GntR family
YP_001671609.1	PFAM: Negative transcriptional regulator; KEGG: pen:PSEEN5492 transcriptional regulator
YP_001671610.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN5493 acetyltransferase, GNAT family
YP_001671611.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN5494 acetyltransferase, GNAT family
YP_001671612.1	catalyzes the formation of oxaloacetate from pyruvate
YP_001671613.1	biotin carboxylase; with subunit B, the carboxyltansferase/biotincarboxyl carrier subunit catalyzes the formation of oxaloacetate from pyruvate
YP_001671614.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN5497 transcriptional regulator, LysR family
YP_001671615.1	KEGG: pen:PSEEN5498 hypothetical protein
YP_001671616.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pen:PSEEN5499 transcriptional regulator, RpiR family
YP_001671617.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001671618.1	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.
YP_001671619.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: pen:PSEEN5505 hypothetical protein
YP_001671620.1	KEGG: psb:Psyr_5067 hypothetical protein
YP_001671621.1	PFAM: sodium/hydrogen exchanger; KEGG: pen:PSEEN5507 sodium/proton antiporter
YP_001671622.1	PFAM: thioesterase superfamily protein; KEGG: pen:PSEEN5508 long-chain acyl-CoA thioester hydrolase family protein
YP_001671623.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
YP_001671624.1	KEGG: pen:PSEEN5510 hypothetical protein
YP_001671625.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pen:PSEEN5511 cobalamin synthesis protein, P47K family
YP_001671626.1	PFAM: Protein of unknown function DUF1826; KEGG: pen:PSEEN5512 hypothetical protein
YP_001671627.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pen:PSEEN5513 cobalamin synthesis protein/P47K family protein
YP_001671628.1	KEGG: pen:PSEEN5514 hypothetical protein
YP_001671629.1	similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis
YP_001671630.1	KEGG: pen:PSEEN5516 hypothetical protein
YP_001671631.1	catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol)
YP_001671632.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN5518 cyclopropane-fatty-acyl-phospholipid synthase
YP_001671633.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001671634.1	PFAM: major facilitator superfamily MFS_1; KEGG: pae:PA0811 probable major facilitator superfamily (MFS) transporter
YP_001671635.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: bci:BCI_0153 glutamate racemase
YP_001671636.1	KEGG: rxy:Rxyl_1155 hypothetical protein
YP_001671637.1	KEGG: dar:Daro_1371 hypothetical protein
YP_001671638.1	KEGG: dar:Daro_1373 hypothetical protein
YP_001671640.1	PFAM: peptidase M23B; KEGG: rso:RSc0249 putative calcium binding hemolysin protein
YP_001671641.1	PFAM: transposase IS3/IS911 family protein; KEGG: pen:PSEEN3943 transposase, IS3 family (orf 1)
YP_001671642.1	PFAM: Integrase catalytic region; KEGG: pen:PSEEN3944 transposase, IS3 family (orf 2)
YP_001671644.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_001671645.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: pen:PSEEN5538 transcriptional repressor, DeoR family
YP_001671646.1	TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: pen:PSEEN5540 UDP-N-acetylglucosamine pyrophosphorylase
YP_001671647.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_001671648.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_001671649.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_001671650.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_001671651.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_001671652.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_001671653.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_001671654.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_001671655.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation
YP_001671656.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: pen:PSEEN5551 chromosomal partitioning protein ParB
YP_001671657.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN5552 chromosome partitioning ATPase ParA
YP_001671658.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_001671659.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_001671660.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_001671661.1	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria