-- dump date 20140620_010551 -- class Genbank::CDS -- table cds_note -- id note YP_007226862.1 COG2217 Cation transport ATPase YP_007226863.1 COG2608 Copper chaperone YP_007226864.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_007226865.1 COG0789 Predicted transcriptional regulators YP_007226866.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_007226867.1 COG3192 Ethanolamine utilization protein YP_007226868.1 COG2771 DNA-binding HTH domain-containing proteins YP_007226869.1 COG3217 Uncharacterized Fe-S protein YP_007226870.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007226871.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_007226872.1 COG0477 Permeases of the major facilitator superfamily YP_007226873.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007226874.1 COG1802 Transcriptional regulators YP_007226875.1 COG1802 Transcriptional regulators YP_007226876.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_007226877.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_007226878.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_007226879.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_007226880.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007226881.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007226882.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007226883.1 COG1061 DNA or RNA helicases of superfamily II YP_007226888.1 COG2801 Transposase and inactivated derivatives YP_007226890.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_007226891.1 COG1349 Transcriptional regulators of sugar metabolism YP_007226892.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_007226893.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_007226894.1 COG0055 F0F1-type ATP synthase, beta subunit YP_007226895.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_007226896.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_007226897.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_007226898.1 COG0711 F0F1-type ATP synthase, subunit b YP_007226899.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_007226900.1 COG0356 F0F1-type ATP synthase, subunit a YP_007226901.1 COG3312 F0F1-type ATP synthase, subunit I YP_007226902.1 COG1475 Predicted transcriptional regulators YP_007226903.1 COG1192 ATPases involved in chromosome partitioning YP_007226904.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_007226905.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_007226906.1 COG0486 Predicted GTPase YP_007226907.1 COG0706 Preprotein translocase subunit YidC YP_007226908.1 COG0759 Uncharacterized conserved protein YP_007226909.1 COG0594 RNase P protein component YP_007226910.1 COG0230 Ribosomal protein L34 YP_007226911.1 COG0593 ATPase involved in DNA replication initiation YP_007226912.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_007226913.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_007226914.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_007226916.1 COG2801 Transposase and inactivated derivatives YP_007226917.1 COG2842 Uncharacterized ATPase, putative transposase YP_007226921.1 COG3019 Predicted metal-binding protein YP_007226922.1 COG2010 Cytochrome c, mono- and diheme variants YP_007226923.1 COG3667 Uncharacterized protein involved in copper resistance YP_007226925.1 COG2132 Putative multicopper oxidases YP_007226927.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007226928.1 COG0642 Signal transduction histidine kinase YP_007226929.1 COG1538 Outer membrane protein YP_007226930.1 COG0845 Membrane-fusion protein YP_007226931.1 COG3696 Putative silver efflux pump YP_007226932.1 COG5569 Uncharacterized conserved protein YP_007226933.1 COG2020 Putative protein-S-isoprenylcysteine methyltransferase YP_007226936.1 COG3391 Uncharacterized conserved protein YP_007226937.1 COG2608 Copper chaperone YP_007226938.1 COG2217 Cation transport ATPase YP_007226943.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_007226950.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_007226951.1 COG1230 Co/Zn/Cd efflux system component YP_007226954.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007226955.1 COG0642 Signal transduction histidine kinase YP_007226958.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_007226959.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_007226960.1 COG2246 Predicted membrane protein YP_007226961.1 COG0583 Transcriptional regulator YP_007226962.1 COG3746 Phosphate-selective porin YP_007226965.1 COG2217 Cation transport ATPase YP_007226967.1 COG3696 Putative silver efflux pump YP_007226968.1 COG0845 Membrane-fusion protein YP_007226969.1 COG1538 Outer membrane protein YP_007226971.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007226974.1 COG4951 Uncharacterized protein conserved in bacteria YP_007226975.1 COG5499 Predicted transcription regulator containing HTH domain YP_007226976.1 COG4680 Uncharacterized protein conserved in bacteria YP_007226977.1 COG5455 Predicted integral membrane protein YP_007226978.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_007226979.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_007226980.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_007226981.1 COG0730 Predicted permeases YP_007226982.1 COG0583 Transcriptional regulator YP_007226983.1 COG2303 Choline dehydrogenase and related flavoproteins YP_007226984.1 COG0477 Permeases of the major facilitator superfamily YP_007226985.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_007226986.1 COG0241 Histidinol phosphatase and related phosphatases YP_007226987.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_007226988.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_007226989.1 COG2818 3-methyladenine DNA glycosylase YP_007226990.1 COG1560 Lauroyl/myristoyl acyltransferase YP_007226991.1 COG0457 FOG: TPR repeat YP_007226992.1 COG0569 K+ transport systems, NAD-binding component YP_007226993.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_007226994.1 COG0223 Methionyl-tRNA formyltransferase YP_007226995.1 COG0242 N-formylmethionyl-tRNA deformylase YP_007226996.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_007226997.1 COG0009 Putative translation factor (SUA5) YP_007226999.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_007227000.1 COG0408 Coproporphyrinogen III oxidase YP_007227001.1 COG0169 Shikimate 5-dehydrogenase YP_007227002.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_007227003.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_007227004.1 COG3119 Arylsulfatase A and related enzymes YP_007227006.1 COG0583 Transcriptional regulator YP_007227007.1 COG2910 Putative NADH-flavin reductase YP_007227008.1 COG3805 Aromatic ring-cleaving dioxygenase YP_007227009.1 COG0159 Tryptophan synthase alpha chain YP_007227010.1 COG0133 Tryptophan synthase beta chain YP_007227011.1 COG0583 Transcriptional regulator YP_007227012.1 COG4575 Uncharacterized conserved protein YP_007227013.1 COG3360 Uncharacterized conserved protein YP_007227015.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_007227016.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_007227020.1 COG4324 Predicted aminopeptidase YP_007227021.1 COG0546 Predicted phosphatases YP_007227022.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_007227023.1 COG0339 Zn-dependent oligopeptidases YP_007227024.1 COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain YP_007227025.1 COG0339 Zn-dependent oligopeptidases YP_007227026.1 COG1533 DNA repair photolyase YP_007227027.1 COG0288 Carbonic anhydrase YP_007227028.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_007227029.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_007227030.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_007227031.1 COG3175 Cytochrome oxidase assembly factor YP_007227032.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_007227034.1 COG3346 Uncharacterized conserved protein YP_007227036.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_007227037.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_007227038.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_007227039.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_007227040.1 COG2011 ABC-type metal ion transport system, permease component YP_007227041.1 COG1135 ABC-type metal ion transport system, ATPase component YP_007227042.1 COG0753 Catalase YP_007227044.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_007227045.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_007227046.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_007227047.1 COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin YP_007227048.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_007227050.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_007227051.1 COG0218 Predicted GTPase YP_007227052.1 COG3245 Cytochrome c5 YP_007227053.1 COG2863 Cytochrome c553 YP_007227054.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_007227055.1 COG3568 Metal-dependent hydrolase YP_007227056.1 COG2199 FOG: GGDEF domain YP_007227057.1 COG3023 Negative regulator of beta-lactamase expression YP_007227058.1 COG4943 Predicted signal transduction protein containing sensor and EAL domains YP_007227059.1 COG0642 Signal transduction histidine kinase YP_007227060.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007227061.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_007227065.1 COG1301 Na+/H+-dicarboxylate symporters YP_007227066.1 COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. YP_007227067.1 COG3218 ABC-type uncharacterized transport system, auxiliary component YP_007227068.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_007227069.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_007227070.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_007227072.1 COG0612 Predicted Zn-dependent peptidases YP_007227073.1 COG1283 Na+/phosphate symporter YP_007227074.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_007227075.1 COG2851 H+/citrate symporter YP_007227076.1 COG3791 Uncharacterized conserved protein YP_007227082.1 COG0427 Acetyl-CoA hydrolase YP_007227083.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_007227084.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_007227085.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_007227086.1 COG0583 Transcriptional regulator YP_007227087.1 COG1960 Acyl-CoA dehydrogenases YP_007227088.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase YP_007227089.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007227090.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_007227091.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007227092.1 COG1802 Transcriptional regulators YP_007227093.1 COG3672 Predicted periplasmic protein YP_007227094.1 COG2199 FOG: GGDEF domain YP_007227095.1 COG0845 Membrane-fusion protein YP_007227096.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_007227097.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_007227099.1 COG2175 Probable taurine catabolism dioxygenase YP_007227100.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_007227101.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_007227102.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_007227103.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_007227107.1 COG1438 Arginine repressor YP_007227108.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_007227109.1 COG1846 Transcriptional regulators YP_007227110.1 COG1289 Predicted membrane protein YP_007227112.1 COG1566 Multidrug resistance efflux pump YP_007227113.1 COG1538 Outer membrane protein YP_007227116.1 COG1943 Transposase and inactivated derivatives YP_007227117.1 COG2010 Cytochrome c, mono- and diheme variants YP_007227120.1 COG0625 Glutathione S-transferase YP_007227121.1 COG0165 Argininosuccinate lyase YP_007227122.1 COG3279 Response regulator of the LytR/AlgR family YP_007227123.1 COG0181 Porphobilinogen deaminase YP_007227124.1 COG1587 Uroporphyrinogen-III synthase YP_007227125.1 COG2959 Uncharacterized enzyme of heme biosynthesis YP_007227126.1 COG3071 Uncharacterized enzyme of heme biosynthesis YP_007227127.1 COG1495 Disulfide bond formation protein DsbB YP_007227128.1 COG3160 Regulator of sigma D YP_007227129.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_007227132.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_007227133.1 COG0668 Small-conductance mechanosensitive channel YP_007227134.1 COG1280 Putative threonine efflux protein YP_007227135.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_007227136.1 COG1030 Membrane-bound serine protease (ClpP class) YP_007227137.1 COG2606 Uncharacterized conserved protein YP_007227140.1 COG0517 FOG: CBS domain YP_007227141.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_007227145.1 COG2188 Transcriptional regulators YP_007227146.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_007227147.1 COG1146 Ferredoxin YP_007227148.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_007227149.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_007227150.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_007227151.1 COG1413 FOG: HEAT repeat YP_007227152.1 COG3536 Uncharacterized protein conserved in bacteria YP_007227153.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_007227154.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_007227155.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_007227156.1 COG2175 Probable taurine catabolism dioxygenase YP_007227157.1 COG0583 Transcriptional regulator YP_007227158.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007227160.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007227161.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_007227162.1 COG0784 FOG: CheY-like receiver YP_007227163.1 COG2202 FOG: PAS/PAC domain YP_007227164.1 COG1398 Fatty-acid desaturase YP_007227165.1 COG2199 FOG: GGDEF domain YP_007227166.1 COG2011 ABC-type metal ion transport system, permease component YP_007227167.1 COG1135 ABC-type metal ion transport system, ATPase component YP_007227168.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_007227169.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_007227170.1 COG1960 Acyl-CoA dehydrogenases YP_007227171.1 COG1960 Acyl-CoA dehydrogenases YP_007227172.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_007227173.1 COG0765 ABC-type amino acid transport system, permease component YP_007227174.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007227175.1 COG1045 Serine acetyltransferase YP_007227176.1 COG1292 Choline-glycine betaine transporter YP_007227177.1 COG2175 Probable taurine catabolism dioxygenase YP_007227178.1 COG4525 ABC-type taurine transport system, ATPase component YP_007227179.1 COG4521 ABC-type taurine transport system, periplasmic component YP_007227181.1 COG0450 Peroxiredoxin YP_007227182.1 COG0431 Predicted flavoprotein YP_007227183.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_007227184.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_007227185.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_007227186.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_007227187.1 COG3585 Molybdopterin-binding protein YP_007227188.1 COG1309 Transcriptional regulator YP_007227189.1 COG2918 Gamma-glutamylcysteine synthetase YP_007227190.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_007227191.1 COG2183 Transcriptional accessory protein YP_007227192.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007227193.1 COG0642 Signal transduction histidine kinase YP_007227194.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_007227195.1 COG4067 Uncharacterized protein conserved in archaea YP_007227196.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_007227197.1 COG0671 Membrane-associated phospholipid phosphatase YP_007227198.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_007227199.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_007227200.1 COG0824 Predicted thioesterase YP_007227202.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_007227203.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_007227204.1 COG1652 Uncharacterized protein containing LysM domain YP_007227205.1 COG1011 Predicted hydrolase (HAD superfamily) YP_007227206.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007227207.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_007227208.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007227209.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007227210.1 COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system YP_007227211.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_007227212.1 COG2957 Peptidylarginine deiminase and related enzymes YP_007227213.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007227215.1 COG0069 Glutamate synthase domain 2 YP_007227216.1 COG0642 Signal transduction histidine kinase YP_007227217.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007227218.1 COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid YP_007227223.1 COG4160 ABC-type arginine/histidine transport system, permease component YP_007227224.1 COG4215 ABC-type arginine transport system, permease component YP_007227225.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007227226.1 COG4598 ABC-type histidine transport system, ATPase component YP_007227227.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007227229.1 COG2326 Uncharacterized conserved protein YP_007227230.1 COG3636 Predicted transcriptional regulator YP_007227231.1 COG2924 Fe-S cluster protector protein YP_007227232.1 COG1194 A/G-specific DNA glycosylase YP_007227233.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_007227234.1 COG0477 Permeases of the major facilitator superfamily YP_007227235.1 COG0131 Imidazoleglycerol-phosphate dehydratase YP_007227236.1 COG0118 Glutamine amidotransferase YP_007227237.1 COG5460 Uncharacterized conserved protein YP_007227238.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_007227239.1 COG0107 Imidazoleglycerol-phosphate synthase YP_007227240.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_007227241.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_007227242.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_007227243.1 COG1760 L-serine deaminase YP_007227244.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007227246.1 COG0824 Predicted thioesterase YP_007227247.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_007227248.1 COG3246 Uncharacterized conserved protein YP_007227249.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_007227250.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007227251.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_007227255.1 COG0442 Prolyl-tRNA synthetase YP_007227256.1 COG3755 Uncharacterized protein conserved in bacteria YP_007227257.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_007227259.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_007227260.1 COG0247 Fe-S oxidoreductase YP_007227261.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_007227262.1 COG2086 Electron transfer flavoprotein, beta subunit YP_007227263.1 COG3209 Rhs family protein YP_007227264.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit YP_007227265.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_007227266.1 COG3209 Rhs family protein YP_007227268.1 COG3027 Uncharacterized protein conserved in bacteria YP_007227269.1 COG0840 Methyl-accepting chemotaxis protein YP_007227270.1 COG2008 Threonine aldolase YP_007227271.1 COG0112 Glycine/serine hydroxymethyltransferase YP_007227272.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007227273.1 COG4311 Sarcosine oxidase delta subunit YP_007227274.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_007227275.1 COG4583 Sarcosine oxidase gamma subunit YP_007227276.1 COG0788 Formyltetrahydrofolate hydrolase YP_007227278.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_007227280.1 COG3209 Rhs family protein YP_007227281.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_007227282.1 COG3209 Rhs family protein YP_007227284.1 COG0531 Amino acid transporters YP_007227285.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_007227286.1 COG4067 Uncharacterized protein conserved in archaea YP_007227287.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007227288.1 COG0642 Signal transduction histidine kinase YP_007227289.1 COG4452 Inner membrane protein involved in colicin E2 resistance YP_007227290.1 COG0625 Glutathione S-transferase YP_007227291.1 COG0225 Peptide methionine sulfoxide reductase YP_007227292.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_007227293.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_007227294.1 COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component YP_007227295.1 COG1391 Glutamine synthetase adenylyltransferase YP_007227296.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_007227297.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_007227298.1 COG0438 Glycosyltransferase YP_007227299.1 COG0515 Serine/threonine protein kinase YP_007227300.1 COG0515 Serine/threonine protein kinase YP_007227301.1 COG0515 Serine/threonine protein kinase YP_007227302.1 COG0515 Serine/threonine protein kinase YP_007227304.1 COG3182 Uncharacterized iron-regulated membrane protein YP_007227305.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007227306.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_007227307.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007227308.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_007227309.1 COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains YP_007227310.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007227311.1 COG2225 Malate synthase YP_007227312.1 COG2716 Glycine cleavage system regulatory protein YP_007227313.1 COG2962 Predicted permeases YP_007227314.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_007227315.1 COG2005 N-terminal domain of molybdenum-binding protein YP_007227316.1 COG1040 Predicted amidophosphoribosyltransferases YP_007227317.1 COG0502 Biotin synthase and related enzymes YP_007227318.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_007227319.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007227320.1 COG0500 SAM-dependent methyltransferases YP_007227321.1 COG0132 Dethiobiotin synthetase YP_007227323.1 COG1960 Acyl-CoA dehydrogenases YP_007227324.1 COG2199 FOG: GGDEF domain YP_007227325.1 COG1960 Acyl-CoA dehydrogenases YP_007227326.1 COG0583 Transcriptional regulator YP_007227327.1 COG4992 Ornithine/acetylornithine aminotransferase YP_007227328.1 COG0401 Uncharacterized homolog of Blt101 YP_007227329.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_007227330.1 COG0535 Predicted Fe-S oxidoreductases YP_007227332.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_007227333.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_007227335.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_007227336.1 COG0388 Predicted amidohydrolase YP_007227337.1 COG1231 Monoamine oxidase YP_007227339.1 COG1522 Transcriptional regulators YP_007227340.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_007227341.1 COG2202 FOG: PAS/PAC domain YP_007227342.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_007227343.1 COG0358 DNA primase (bacterial type) YP_007227344.1 COG0828 Ribosomal protein S21 YP_007227345.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_007227346.1 COG0344 Predicted membrane protein YP_007227347.1 COG1539 Dihydroneopterin aldolase YP_007227348.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_007227349.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_007227350.1 COG2719 Uncharacterized conserved protein YP_007227351.1 COG2718 Uncharacterized conserved protein YP_007227352.1 COG2766 Putative Ser protein kinase YP_007227353.1 COG0607 Rhodanese-related sulfurtransferase YP_007227354.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_007227355.1 COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport YP_007227356.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_007227357.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_007227358.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_007227359.1 COG1452 Organic solvent tolerance protein OstA YP_007227360.1 COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases YP_007227361.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) YP_007227362.1 COG1076 DnaJ-domain-containing proteins 1 YP_007227363.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007227364.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007227365.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007227366.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_007227367.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007227368.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_007227369.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_007227370.1 COG0036 Pentose-5-phosphate-3-epimerase YP_007227371.1 COG0546 Predicted phosphatases YP_007227372.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_007227373.1 COG3240 Phospholipase/lecithinase/hemolysin YP_007227375.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_007227376.1 COG0547 Anthranilate phosphoribosyltransferase YP_007227377.1 COG0134 Indole-3-glycerol phosphate synthase YP_007227378.1 COG0095 Lipoate-protein ligase A YP_007227379.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_007227380.1 COG1765 Predicted redox protein, regulator of disulfide bond formation YP_007227382.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_007227383.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_007227384.1 COG0300 Short-chain dehydrogenases of various substrate specificities YP_007227385.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_007227386.1 COG1981 Predicted membrane protein YP_007227387.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_007227388.1 COG0316 Uncharacterized conserved protein YP_007227389.1 COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases YP_007227390.1 COG0739 Membrane proteins related to metalloendopeptidases YP_007227391.1 COG0162 Tyrosyl-tRNA synthetase YP_007227392.1 COG1654 Biotin operon repressor YP_007227393.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_007227395.1 COG0050 GTPases - translation elongation factors YP_007227396.1 COG0050 GTPases - translation elongation factors YP_007227397.1 COG0690 Preprotein translocase subunit SecE YP_007227398.1 COG0250 Transcription antiterminator YP_007227399.1 COG0080 Ribosomal protein L11 YP_007227400.1 COG0081 Ribosomal protein L1 YP_007227401.1 COG0244 Ribosomal protein L10 YP_007227402.1 COG0222 Ribosomal protein L7/L12 YP_007227403.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_007227404.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_007227405.1 COG0048 Ribosomal protein S12 YP_007227406.1 COG0049 Ribosomal protein S7 YP_007227407.1 COG0480 Translation elongation factors (GTPases) YP_007227408.1 COG0050 GTPases - translation elongation factors YP_007227409.1 COG0051 Ribosomal protein S10 YP_007227410.1 COG0087 Ribosomal protein L3 YP_007227411.1 COG0088 Ribosomal protein L4 YP_007227412.1 COG0089 Ribosomal protein L23 YP_007227413.1 COG0090 Ribosomal protein L2 YP_007227414.1 COG0185 Ribosomal protein S19 YP_007227415.1 COG0091 Ribosomal protein L22 YP_007227416.1 COG0092 Ribosomal protein S3 YP_007227417.1 COG0197 Ribosomal protein L16/L10E YP_007227418.1 COG0255 Ribosomal protein L29 YP_007227419.1 COG0186 Ribosomal protein S17 YP_007227420.1 COG0093 Ribosomal protein L14 YP_007227421.1 COG0198 Ribosomal protein L24 YP_007227422.1 COG0094 Ribosomal protein L5 YP_007227423.1 COG0199 Ribosomal protein S14 YP_007227424.1 COG0096 Ribosomal protein S8 YP_007227425.1 COG0097 Ribosomal protein L6P/L9E YP_007227426.1 COG0256 Ribosomal protein L18 YP_007227427.1 COG0098 Ribosomal protein S5 YP_007227428.1 COG1841 Ribosomal protein L30/L7E YP_007227429.1 COG0200 Ribosomal protein L15 YP_007227430.1 COG0201 Preprotein translocase subunit SecY YP_007227431.1 COG0257 Ribosomal protein L36 YP_007227432.1 COG0099 Ribosomal protein S13 YP_007227433.1 COG0100 Ribosomal protein S11 YP_007227434.1 COG0522 Ribosomal protein S4 and related proteins YP_007227435.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_007227436.1 COG0203 Ribosomal protein L17 YP_007227437.1 COG0753 Catalase YP_007227438.1 COG2193 Bacterioferritin (cytochrome b1) YP_007227439.1 COG0178 Excinuclease ATPase subunit YP_007227440.1 COG0477 Permeases of the major facilitator superfamily YP_007227441.1 COG0629 Single-stranded DNA-binding protein YP_007227442.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007227443.1 COG0730 Predicted permeases YP_007227444.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_007227445.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_007227446.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_007227447.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_007227448.1 COG2864 Cytochrome b subunit of formate dehydrogenase YP_007227449.1 COG3058 Uncharacterized protein involved in formate dehydrogenase formation YP_007227450.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_007227451.1 COG3276 Selenocysteine-specific translation elongation factor YP_007227452.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_007227453.1 COG1115 Na+/alanine symporter YP_007227454.1 COG1396 Predicted transcriptional regulators YP_007227455.1 COG0730 Predicted permeases YP_007227457.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_007227458.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_007227459.1 COG1733 Predicted transcriptional regulators YP_007227460.1 COG0477 Permeases of the major facilitator superfamily YP_007227461.1 COG3047 Outer membrane protein W YP_007227462.1 COG3495 Uncharacterized protein conserved in bacteria YP_007227463.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_007227464.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_007227467.1 COG3118 Thioredoxin domain-containing protein YP_007227468.1 COG3897 Predicted methyltransferase YP_007227469.1 COG3126 Uncharacterized protein conserved in bacteria YP_007227470.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_007227471.1 COG0117 Pyrimidine deaminase YP_007227472.1 COG0307 Riboflavin synthase alpha chain YP_007227473.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_007227474.1 COG0054 Riboflavin synthase beta-chain YP_007227475.1 COG0781 Transcription termination factor YP_007227476.1 COG0611 Thiamine monophosphate kinase YP_007227477.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_007227478.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007227479.1 COG0807 GTP cyclohydrolase II YP_007227481.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_007227482.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_007227483.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_007227484.1 COG1722 Exonuclease VII small subunit YP_007227485.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_007227486.1 COG1690 Uncharacterized conserved protein YP_007227489.1 COG2010 Cytochrome c, mono- and diheme variants YP_007227490.1 COG3667 Uncharacterized protein involved in copper resistance YP_007227491.1 COG3667 Uncharacterized protein involved in copper resistance YP_007227492.1 COG2132 Putative multicopper oxidases YP_007227493.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_007227494.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_007227495.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_007227496.1 COG0845 Membrane-fusion protein YP_007227497.1 COG2932 Predicted transcriptional regulator YP_007227498.1 COG0221 Inorganic pyrophosphatase YP_007227499.1 COG3228 Uncharacterized protein conserved in bacteria YP_007227500.1 COG0586 Uncharacterized membrane-associated protein YP_007227501.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007227502.1 COG4302 Ethanolamine ammonia-lyase, small subunit YP_007227503.1 COG4303 Ethanolamine ammonia-lyase, large subunit YP_007227504.1 COG0531 Amino acid transporters YP_007227505.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007227506.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_007227507.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_007227508.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_007227510.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_007227511.1 COG4642 Uncharacterized protein conserved in bacteria YP_007227513.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_007227514.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_007227515.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_007227516.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_007227517.1 COG3199 Uncharacterized conserved protein YP_007227518.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_007227519.1 COG0439 Biotin carboxylase YP_007227520.1 COG0511 Biotin carboxyl carrier protein YP_007227521.1 COG0757 3-dehydroquinate dehydratase II YP_007227522.1 COG4232 Thiol:disulfide interchange protein YP_007227523.1 COG0840 Methyl-accepting chemotaxis protein YP_007227524.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_007227525.1 COG5345 Uncharacterized protein conserved in bacteria YP_007227526.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007227527.1 COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins YP_007227528.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_007227529.1 COG1943 Transposase and inactivated derivatives YP_007227530.1 COG0534 Na+-driven multidrug efflux pump YP_007227531.1 COG2373 Large extracellular alpha-helical protein YP_007227533.1 COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC YP_007227534.1 COG2831 Hemolysin activation/secretion protein YP_007227535.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007227539.1 COG0500 SAM-dependent methyltransferases YP_007227540.1 COG1694 Predicted pyrophosphatase YP_007227541.1 COG2030 Acyl dehydratase YP_007227542.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007227543.1 COG0183 Acetyl-CoA acetyltransferase YP_007227544.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007227545.1 COG0840 Methyl-accepting chemotaxis protein YP_007227546.1 COG0789 Predicted transcriptional regulators YP_007227547.1 COG2217 Cation transport ATPase YP_007227549.1 COG2608 Copper chaperone YP_007227550.1 COG0477 Permeases of the major facilitator superfamily YP_007227552.1 COG0640 Predicted transcriptional regulators YP_007227553.1 COG1816 Adenosine deaminase YP_007227554.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007227555.1 COG1739 Uncharacterized conserved protein YP_007227556.1 COG1309 Transcriptional regulator YP_007227557.1 COG0583 Transcriptional regulator YP_007227558.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_007227559.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007227560.1 COG2995 Uncharacterized paraquat-inducible protein A YP_007227561.1 COG2995 Uncharacterized paraquat-inducible protein A YP_007227562.1 COG3008 Paraquat-inducible protein B YP_007227564.1 COG0268 Ribosomal protein S20 YP_007227565.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_007227566.1 COG0196 FAD synthase YP_007227567.1 COG0060 Isoleucyl-tRNA synthetase YP_007227568.1 COG0597 Lipoprotein signal peptidase YP_007227569.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_007227570.1 COG0761 Penicillin tolerance protein YP_007227575.1 COG4968 Tfp pilus assembly protein PilE YP_007227576.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007227578.1 COG4105 DNA uptake lipoprotein YP_007227579.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_007227580.1 COG1496 Uncharacterized conserved protein YP_007227581.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_007227582.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_007227586.1 COG3235 Predicted membrane protein YP_007227587.1 COG3024 Uncharacterized protein conserved in bacteria YP_007227588.1 COG0237 Dephospho-CoA kinase YP_007227589.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_007227590.1 COG1459 Type II secretory pathway, component PulF YP_007227591.1 COG4969 Tfp pilus assembly protein, major pilin PilA YP_007227594.1 COG0270 Site-specific DNA methylase YP_007227595.1 COG3791 Uncharacterized conserved protein YP_007227597.1 COG0477 Permeases of the major facilitator superfamily YP_007227598.1 COG0583 Transcriptional regulator YP_007227599.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_007227600.1 COG0477 Permeases of the major facilitator superfamily YP_007227601.1 COG0631 Serine/threonine protein phosphatase YP_007227604.1 COG0039 Malate/lactate dehydrogenases YP_007227605.1 COG0765 ABC-type amino acid transport system, permease component YP_007227606.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007227607.1 COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) YP_007227608.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_007227609.1 COG0833 Amino acid transporters YP_007227610.1 COG0583 Transcriptional regulator YP_007227611.1 COG0498 Threonine synthase YP_007227612.1 COG1522 Transcriptional regulators YP_007227613.1 COG0460 Homoserine dehydrogenase YP_007227614.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007227615.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_007227616.1 COG0798 Arsenite efflux pump ACR3 and related permeases YP_007227617.1 COG0112 Glycine/serine hydroxymethyltransferase YP_007227618.1 COG2199 FOG: GGDEF domain YP_007227620.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_007227621.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_007227622.1 COG0782 Transcription elongation factor YP_007227624.1 COG2308 Uncharacterized conserved protein YP_007227626.1 COG1067 Predicted ATP-dependent protease YP_007227628.1 COG2862 Predicted membrane protein YP_007227630.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_007227632.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_007227633.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_007227634.1 COG0261 Ribosomal protein L21 YP_007227635.1 COG0211 Ribosomal protein L27 YP_007227636.1 COG0536 Predicted GTPase YP_007227637.1 COG0263 Glutamate 5-kinase YP_007227638.1 COG3045 Uncharacterized protein conserved in bacteria YP_007227639.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_007227640.1 COG3095 Uncharacterized protein involved in chromosome partitioning YP_007227643.1 COG0456 Acetyltransferases YP_007227646.1 COG0583 Transcriptional regulator YP_007227647.1 COG1280 Putative threonine efflux protein YP_007227648.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_007227649.1 COG0477 Permeases of the major facilitator superfamily YP_007227650.1 COG0477 Permeases of the major facilitator superfamily YP_007227651.1 COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase YP_007227652.1 COG2169 Adenosine deaminase YP_007227653.1 COG3264 Small-conductance mechanosensitive channel YP_007227655.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007227656.1 COG1457 Purine-cytosine permease and related proteins YP_007227658.1 COG3177 Uncharacterized conserved protein YP_007227659.1 COG0598 Mg2+ and Co2+ transporters YP_007227660.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_007227661.1 COG0765 ABC-type amino acid transport system, permease component YP_007227662.1 COG0765 ABC-type amino acid transport system, permease component YP_007227663.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007227664.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007227665.1 COG1171 Threonine dehydratase YP_007227666.1 COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog YP_007227667.1 COG0006 Xaa-Pro aminopeptidase YP_007227668.1 COG3608 Predicted deacylase YP_007227669.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007227670.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_007227671.1 COG1335 Amidases related to nicotinamidase YP_007227672.1 COG2326 Uncharacterized conserved protein YP_007227673.1 COG0475 Kef-type K+ transport systems, membrane components YP_007227674.1 COG0628 Predicted permease YP_007227675.1 COG1538 Outer membrane protein YP_007227676.1 COG1566 Multidrug resistance efflux pump YP_007227678.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_007227679.1 COG0012 Predicted GTPase, probable translation factor YP_007227680.1 COG0193 Peptidyl-tRNA hydrolase YP_007227681.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_007227682.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_007227683.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_007227684.1 COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis YP_007227685.1 COG0457 FOG: TPR repeat YP_007227689.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_007227690.1 COG0373 Glutamyl-tRNA reductase YP_007227691.1 COG0216 Protein chain release factor A YP_007227692.1 COG2890 Methylase of polypeptide chain release factors YP_007227693.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_007227694.1 COG0796 Glutamate racemase YP_007227696.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007227697.1 COG0415 Deoxyribodipyrimidine photolyase YP_007227698.1 COG0789 Predicted transcriptional regulators YP_007227699.1 COG1683 Uncharacterized conserved protein YP_007227700.1 COG3380 Predicted NAD/FAD-dependent oxidoreductase YP_007227701.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_007227702.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_007227703.1 COG2233 Xanthine/uracil permeases YP_007227704.1 COG0035 Uracil phosphoribosyltransferase YP_007227705.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase YP_007227707.1 COG1469 Uncharacterized conserved protein YP_007227709.1 COG0579 Predicted dehydrogenase YP_007227713.1 COG2937 Glycerol-3-phosphate O-acyltransferase YP_007227716.1 COG2135 Uncharacterized conserved protein YP_007227717.1 COG0501 Zn-dependent protease with chaperone function YP_007227718.1 COG2119 Predicted membrane protein YP_007227719.1 COG2813 16S RNA G1207 methylase RsmC YP_007227720.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_007227721.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_007227724.1 COG2909 ATP-dependent transcriptional regulator YP_007227725.1 COG0784 FOG: CheY-like receiver YP_007227726.1 COG2205 Osmosensitive K+ channel histidine kinase YP_007227727.1 COG2336 Growth regulator YP_007227728.1 COG2337 Growth inhibitor YP_007227729.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_007227730.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007227731.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase YP_007227733.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_007227734.1 COG0386 Glutathione peroxidase YP_007227735.1 COG0438 Glycosyltransferase YP_007227736.1 COG2202 FOG: PAS/PAC domain YP_007227738.1 COG5620 Uncharacterized conserved protein YP_007227739.1 COG2981 Uncharacterized protein involved in cysteine biosynthesis YP_007227740.1 COG0492 Thioredoxin reductase YP_007227741.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_007227743.1 COG3023 Negative regulator of beta-lactamase expression YP_007227744.1 COG3725 Membrane protein required for beta-lactamase induction YP_007227745.1 COG0084 Mg-dependent DNase YP_007227746.1 COG1609 Transcriptional regulators YP_007227747.1 COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain YP_007227748.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) YP_007227749.1 COG1445 Phosphotransferase system fructose-specific component IIB YP_007227750.1 COG3530 Uncharacterized protein conserved in bacteria YP_007227752.1 COG2199 FOG: GGDEF domain YP_007227755.1 COG0642 Signal transduction histidine kinase YP_007227756.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007227757.1 COG0841 Cation/multidrug efflux pump YP_007227758.1 COG0845 Membrane-fusion protein YP_007227759.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_007227761.1 COG0835 Chemotaxis signal transduction protein YP_007227762.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains YP_007227763.1 COG1017 Hemoglobin-like flavoprotein YP_007227764.1 COG1495 Disulfide bond formation protein DsbB YP_007227765.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_007227766.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_007227767.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_007227768.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_007227769.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_007227770.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_007227772.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_007227775.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_007227777.1 COG3755 Uncharacterized protein conserved in bacteria YP_007227778.1 COG2603 Predicted ATPase YP_007227779.1 COG0709 Selenophosphate synthase YP_007227780.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_007227781.1 COG3638 ABC-type phosphate/phosphonate transport system, ATPase component YP_007227782.1 COG3639 ABC-type phosphate/phosphonate transport system, permease component YP_007227783.1 COG3639 ABC-type phosphate/phosphonate transport system, permease component YP_007227784.1 COG3781 Predicted membrane protein YP_007227785.1 COG3657 Uncharacterized protein conserved in bacteria YP_007227786.1 COG3636 Predicted transcriptional regulator YP_007227787.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007227788.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007227789.1 COG0583 Transcriptional regulator YP_007227790.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_007227791.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_007227792.1 COG1862 Preprotein translocase subunit YajC YP_007227793.1 COG0342 Preprotein translocase subunit SecD YP_007227794.1 COG0341 Preprotein translocase subunit SecF YP_007227795.1 COG3134 Predicted outer membrane lipoprotein YP_007227796.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_007227797.1 COG0565 rRNA methylase YP_007227798.1 COG1045 Serine acetyltransferase YP_007227799.1 COG1959 Predicted transcriptional regulator YP_007227800.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_007227801.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_007227802.1 COG0316 Uncharacterized conserved protein YP_007227803.1 COG1076 DnaJ-domain-containing proteins 1 YP_007227804.1 COG0443 Molecular chaperone YP_007227805.1 COG0633 Ferredoxin YP_007227806.1 COG2975 Uncharacterized protein conserved in bacteria YP_007227807.1 COG0105 Nucleoside diphosphate kinase YP_007227808.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_007227809.1 COG3063 Tfp pilus assembly protein PilF YP_007227810.1 COG1426 Uncharacterized protein conserved in bacteria YP_007227811.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_007227812.1 COG0124 Histidyl-tRNA synthetase YP_007227813.1 COG2976 Uncharacterized protein conserved in bacteria YP_007227814.1 COG1520 FOG: WD40-like repeat YP_007227815.1 COG1160 Predicted GTPases YP_007227817.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_007227818.1 COG0388 Predicted amidohydrolase YP_007227819.1 COG3182 Uncharacterized iron-regulated membrane protein YP_007227820.1 COG4774 Outer membrane receptor for monomeric catechols YP_007227821.1 COG3128 Uncharacterized iron-regulated protein YP_007227822.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_007227823.1 COG0019 Diaminopimelate decarboxylase YP_007227824.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007227825.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_007227826.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007227827.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_007227828.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_007227829.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_007227830.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_007227831.1 COG4108 Peptide chain release factor RF-3 YP_007227832.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007227833.1 COG3450 Predicted enzyme of the cupin superfamily YP_007227834.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007227835.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007227836.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_007227837.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_007227838.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_007227839.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_007227840.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_007227842.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_007227843.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_007227844.1 COG3471 Predicted periplasmic/secreted protein YP_007227845.1 COG0642 Signal transduction histidine kinase YP_007227846.1 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain YP_007227847.1 COG0679 Predicted permeases YP_007227848.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007227849.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_007227850.1 COG0530 Ca2+/Na+ antiporter YP_007227851.1 COG0797 Lipoproteins YP_007227852.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_007227853.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_007227854.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_007227855.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_007227856.1 COG1792 Cell shape-determining protein YP_007227857.1 COG2891 Cell shape-determining protein YP_007227858.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_007227859.1 COG1530 Ribonucleases G and E YP_007227860.1 COG3164 Predicted membrane protein YP_007227861.1 COG0388 Predicted amidohydrolase YP_007227862.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_007227863.1 COG3028 Uncharacterized protein conserved in bacteria YP_007227864.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_007227866.1 COG0114 Fumarase YP_007227867.1 COG0605 Superoxide dismutase YP_007227868.1 COG1925 Phosphotransferase system, HPr-related proteins YP_007227869.1 COG1660 Predicted P-loop-containing kinase YP_007227870.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_007227871.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_007227872.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_007227873.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_007227874.1 COG1934 Uncharacterized protein conserved in bacteria YP_007227875.1 COG3117 Uncharacterized protein conserved in bacteria YP_007227876.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_007227877.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_007227878.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_007227879.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_007227880.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_007227881.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_007227882.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_007227883.1 COG5007 Predicted transcriptional regulator, BolA superfamily YP_007227884.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_007227885.1 COG0040 ATP phosphoribosyltransferase YP_007227886.1 COG0141 Histidinol dehydrogenase YP_007227887.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_007227888.1 COG2186 Transcriptional regulators YP_007227889.1 COG2807 Cyanate permease YP_007227890.1 COG3631 Ketosteroid isomerase-related protein YP_007227891.1 COG2827 Predicted endonuclease containing a URI domain YP_007227892.1 COG3081 Nucleoid-associated protein YP_007227893.1 COG0776 Bacterial nucleoid DNA-binding protein YP_007227894.1 COG3129 Predicted SAM-dependent methyltransferase YP_007227895.1 COG0525 Valyl-tRNA synthetase YP_007227897.1 COG2927 DNA polymerase III, chi subunit YP_007227898.1 COG0260 Leucyl aminopeptidase YP_007227900.1 COG0795 Predicted permeases YP_007227901.1 COG0795 Predicted permeases YP_007227902.1 COG1714 Predicted membrane protein/domain YP_007227903.1 COG1278 Cold shock proteins YP_007227904.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_007227905.1 COG1760 L-serine deaminase YP_007227906.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_007227907.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_007227908.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_007227910.1 COG0583 Transcriptional regulator YP_007227911.1 COG0786 Na+/glutamate symporter YP_007227912.1 COG3283 Transcriptional regulator of aromatic amino acids metabolism YP_007227914.1 COG0549 Carbamate kinase YP_007227915.1 COG0078 Ornithine carbamoyltransferase YP_007227916.1 COG2235 Arginine deiminase YP_007227917.1 COG0531 Amino acid transporters YP_007227918.1 COG0531 Amino acid transporters YP_007227919.1 COG2832 Uncharacterized protein conserved in bacteria YP_007227920.1 COG3230 Heme oxygenase YP_007227921.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007227922.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_007227923.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007227924.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_007227925.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_007227926.1 COG0837 Glucokinase YP_007227927.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007227928.1 COG0642 Signal transduction histidine kinase YP_007227929.1 COG2942 N-acyl-D-glucosamine 2-epimerase YP_007227930.1 COG1653 ABC-type sugar transport system, periplasmic component YP_007227931.1 COG1175 ABC-type sugar transport systems, permease components YP_007227932.1 COG0395 ABC-type sugar transport system, permease component YP_007227933.1 COG3839 ABC-type sugar transport systems, ATPase components YP_007227934.1 COG3659 Carbohydrate-selective porin YP_007227935.1 COG0676 Uncharacterized enzymes related to aldose 1-epimerase YP_007227936.1 COG1737 Transcriptional regulators YP_007227937.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_007227938.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_007227939.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_007227940.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_007227941.1 COG0739 Membrane proteins related to metalloendopeptidases YP_007227942.1 COG1570 Exonuclease VII, large subunit YP_007227943.1 COG0583 Transcriptional regulator YP_007227944.1 COG0730 Predicted permeases YP_007227946.1 COG0516 IMP dehydrogenase/GMP reductase YP_007227947.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_007227948.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_007227949.1 COG1397 ADP-ribosylglycohydrolase YP_007227950.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_007227951.1 COG2132 Putative multicopper oxidases YP_007227952.1 COG0590 Cytosine/adenosine deaminases YP_007227953.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_007227954.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_007227955.1 COG3323 Uncharacterized protein conserved in bacteria YP_007227956.1 COG0805 Sec-independent protein secretion pathway component TatC YP_007227957.1 COG1826 Sec-independent protein secretion pathway components YP_007227958.1 COG1826 Sec-independent protein secretion pathway components YP_007227959.1 COG3156 Type II secretory pathway, component PulK YP_007227960.1 COG3211 Predicted phosphatase YP_007227961.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_007227962.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_007227963.1 COG1450 Type II secretory pathway, component PulD YP_007227964.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_007227965.1 COG1459 Type II secretory pathway, component PulF YP_007227966.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_007227967.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_007227969.1 COG4966 Tfp pilus assembly protein PilW YP_007227973.1 COG3210 Large exoproteins involved in heme utilization or adhesion YP_007227974.1 COG2831 Hemolysin activation/secretion protein YP_007227975.1 COG3034 Uncharacterized protein conserved in bacteria YP_007227976.1 COG1051 ADP-ribose pyrophosphatase YP_007227977.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007227978.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_007227979.1 COG3313 Predicted Fe-S protein YP_007227980.1 COG1738 Uncharacterized conserved protein YP_007227981.1 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) YP_007227982.1 COG0477 Permeases of the major facilitator superfamily YP_007227983.1 COG1253 Hemolysins and related proteins containing CBS domains YP_007227984.1 COG4137 ABC-type uncharacterized transport system, permease component YP_007227985.1 COG0541 Signal recognition particle GTPase YP_007227986.1 COG0228 Ribosomal protein S16 YP_007227987.1 COG0806 RimM protein, required for 16S rRNA processing YP_007227988.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_007227989.1 COG0335 Ribosomal protein L19 YP_007227990.1 COG1607 Acyl-CoA hydrolase YP_007227991.1 COG4974 Site-specific recombinase XerD YP_007227992.1 COG1651 Protein-disulfide isomerase YP_007227993.1 COG0460 Homoserine dehydrogenase YP_007227994.1 COG0498 Threonine synthase YP_007227995.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007227998.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase YP_007227999.1 COG4681 Uncharacterized protein conserved in bacteria YP_007228000.1 COG0608 Single-stranded DNA-specific exonuclease YP_007228001.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_007228002.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007228003.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_007228004.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_007228005.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_007228006.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007228007.1 COG2979 Uncharacterized protein conserved in bacteria YP_007228008.1 COG0840 Methyl-accepting chemotaxis protein YP_007228009.1 COG0835 Chemotaxis signal transduction protein YP_007228010.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_007228011.1 COG0835 Chemotaxis signal transduction protein YP_007228012.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_007228013.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_007228014.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_007228016.1 COG1186 Protein chain release factor B YP_007228017.1 COG1190 Lysyl-tRNA synthetase (class II) YP_007228018.1 COG3226 Uncharacterized protein conserved in bacteria YP_007228020.1 COG3930 Uncharacterized protein conserved in bacteria YP_007228021.1 COG1073 Hydrolases of the alpha/beta superfamily YP_007228023.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007228026.1 COG2352 Phosphoenolpyruvate carboxylase YP_007228027.1 COG0563 Adenylate kinase and related kinases YP_007228028.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_007228030.1 COG1801 Uncharacterized conserved protein YP_007228031.1 COG2513 PEP phosphonomutase and related enzymes YP_007228032.1 COG3921 Uncharacterized protein conserved in bacteria YP_007228034.1 COG0500 SAM-dependent methyltransferases YP_007228035.1 COG3209 Rhs family protein YP_007228036.1 COG1309 Transcriptional regulator YP_007228039.1 COG0845 Membrane-fusion protein YP_007228040.1 COG0841 Cation/multidrug efflux pump YP_007228042.1 COG3126 Uncharacterized protein conserved in bacteria YP_007228044.1 COG3126 Uncharacterized protein conserved in bacteria YP_007228045.1 COG2937 Glycerol-3-phosphate O-acyltransferase YP_007228046.1 COG1278 Cold shock proteins YP_007228048.1 COG0500 SAM-dependent methyltransferases YP_007228049.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_007228050.1 COG5309 Exo-beta-1,3-glucanase YP_007228051.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_007228052.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_007228053.1 COG0520 Selenocysteine lyase YP_007228054.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_007228055.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_007228056.1 COG2944 Predicted transcriptional regulator YP_007228057.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_007228058.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_007228059.1 COG2844 UTP:GlnB (protein PII) uridylyltransferase YP_007228060.1 COG0024 Methionine aminopeptidase YP_007228061.1 COG0052 Ribosomal protein S2 YP_007228062.1 COG0264 Translation elongation factor Ts YP_007228063.1 COG0528 Uridylate kinase YP_007228064.1 COG0233 Ribosome recycling factor YP_007228065.1 COG0020 Undecaprenyl pyrophosphate synthase YP_007228066.1 COG0575 CDP-diglyceride synthetase YP_007228067.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_007228068.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_007228069.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_007228070.1 COG2825 Outer membrane protein YP_007228071.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_007228072.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_007228073.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_007228074.1 COG0763 Lipid A disaccharide synthetase YP_007228075.1 COG0164 Ribonuclease HII YP_007228076.1 COG0587 DNA polymerase III, alpha subunit YP_007228077.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_007228078.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_007228079.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_007228080.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_007228081.1 COG0148 Enolase YP_007228082.1 COG2919 Septum formation initiator YP_007228083.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_007228084.1 COG0583 Transcriptional regulator YP_007228085.1 COG1062 Zn-dependent alcohol dehydrogenases, class III YP_007228086.1 COG0627 Predicted esterase YP_007228087.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_007228088.1 COG0585 Uncharacterized conserved protein YP_007228089.1 COG0496 Predicted acid phosphatase YP_007228090.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_007228091.1 COG0739 Membrane proteins related to metalloendopeptidases YP_007228092.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_007228093.1 COG1146 Ferredoxin YP_007228094.1 COG0249 Mismatch repair ATPase (MutS family) YP_007228095.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_007228096.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_007228097.1 COG0468 RecA/RadA recombinase YP_007228098.1 COG2137 Uncharacterized protein conserved in bacteria YP_007228099.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_007228102.1 COG3148 Uncharacterized conserved protein YP_007228103.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007228104.1 COG0818 Diacylglycerol kinase YP_007228105.1 COG0583 Transcriptional regulator YP_007228106.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_007228107.1 COG3091 Uncharacterized protein conserved in bacteria YP_007228109.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_007228110.1 COG2818 3-methyladenine DNA glycosylase YP_007228111.1 COG3308 Predicted membrane protein YP_007228112.1 COG0655 Multimeric flavodoxin WrbA YP_007228113.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_007228114.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_007228115.1 COG3187 Heat shock protein YP_007228117.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_007228118.1 COG0642 Signal transduction histidine kinase YP_007228119.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007228120.1 COG0642 Signal transduction histidine kinase YP_007228121.1 COG0031 Cysteine synthase YP_007228122.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_007228123.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_007228124.1 COG1694 Predicted pyrophosphatase YP_007228125.1 COG3122 Uncharacterized protein conserved in bacteria YP_007228126.1 COG0554 Glycerol kinase YP_007228128.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_007228129.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_007228130.1 COG3249 Uncharacterized protein conserved in bacteria YP_007228131.1 COG0628 Predicted permease YP_007228132.1 COG0593 ATPase involved in DNA replication initiation YP_007228133.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_007228134.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_007228135.1 COG2133 Glucose/sorbosone dehydrogenases YP_007228138.1 COG2109 ATP:corrinoid adenosyltransferase YP_007228139.1 COG1797 Cobyrinic acid a,c-diamide synthase YP_007228140.1 COG0778 Nitroreductase YP_007228141.1 COG1270 Cobalamin biosynthesis protein CobD/CbiB YP_007228142.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_007228143.1 COG1492 Cobyric acid synthase YP_007228144.1 COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase YP_007228145.1 COG2038 NaMN:DMB phosphoribosyltransferase YP_007228146.1 COG0406 Fructose-2,6-bisphosphatase YP_007228147.1 COG0368 Cobalamin-5-phosphate synthase YP_007228149.1 COG1846 Transcriptional regulators YP_007228150.1 COG0477 Permeases of the major facilitator superfamily YP_007228152.1 COG0386 Glutathione peroxidase YP_007228155.1 COG0583 Transcriptional regulator YP_007228156.1 COG2067 Long-chain fatty acid transport protein YP_007228159.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_007228160.1 COG1322 Uncharacterized protein conserved in bacteria YP_007228161.1 COG0591 Na+/proline symporter YP_007228162.1 COG0477 Permeases of the major facilitator superfamily YP_007228163.1 COG0477 Permeases of the major facilitator superfamily YP_007228164.1 COG2076 Membrane transporters of cations and cationic drugs YP_007228165.1 COG0385 Predicted Na+-dependent transporter YP_007228166.1 COG2974 DNA recombination-dependent growth factor C YP_007228167.1 COG0024 Methionine aminopeptidase YP_007228168.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_007228169.1 COG1251 NAD(P)H-nitrite reductase YP_007228170.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_007228171.1 COG0583 Transcriptional regulator YP_007228173.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_007228174.1 COG3339 Uncharacterized conserved protein YP_007228175.1 COG1396 Predicted transcriptional regulators YP_007228177.1 COG2200 FOG: EAL domain YP_007228178.1 COG0793 Periplasmic protease YP_007228179.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_007228180.1 COG0560 Phosphoserine phosphatase YP_007228181.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_007228182.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_007228183.1 COG4132 ABC-type uncharacterized transport system, permease component YP_007228184.1 COG1524 Uncharacterized proteins of the AP superfamily YP_007228185.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_007228186.1 COG2188 Transcriptional regulators YP_007228187.1 COG0668 Small-conductance mechanosensitive channel YP_007228189.1 COG1362 Aspartyl aminopeptidase YP_007228190.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_007228191.1 COG0851 Septum formation topological specificity factor YP_007228192.1 COG2894 Septum formation inhibitor-activating ATPase YP_007228193.1 COG0850 Septum formation inhibitor YP_007228194.1 COG1560 Lauroyl/myristoyl acyltransferase YP_007228195.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_007228196.1 COG2853 Surface lipoprotein YP_007228199.1 COG5309 Exo-beta-1,3-glucanase YP_007228200.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_007228201.1 COG3162 Predicted membrane protein YP_007228202.1 COG4147 Predicted symporter YP_007228204.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007228205.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_007228206.1 COG3089 Uncharacterized protein conserved in bacteria YP_007228207.1 COG1363 Cellulase M and related proteins YP_007228208.1 COG0456 Acetyltransferases YP_007228209.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_007228210.1 COG4121 Uncharacterized conserved protein YP_007228211.1 COG2326 Uncharacterized conserved protein YP_007228212.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007228213.1 COG0114 Fumarase YP_007228214.1 COG3184 Uncharacterized protein conserved in bacteria YP_007228215.1 COG0271 Stress-induced morphogen (activity unknown) YP_007228216.1 COG1054 Predicted sulfurtransferase YP_007228217.1 COG3531 Predicted protein-disulfide isomerase YP_007228218.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_007228219.1 COG2202 FOG: PAS/PAC domain YP_007228220.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_007228221.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007228222.1 COG0546 Predicted phosphatases YP_007228223.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_007228224.1 COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family YP_007228225.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_007228226.1 COG1932 Phosphoserine aminotransferase YP_007228227.1 COG1605 Chorismate mutase YP_007228228.1 COG0287 Prephenate dehydrogenase YP_007228229.1 COG0283 Cytidylate kinase YP_007228230.1 COG0539 Ribosomal protein S1 YP_007228231.1 COG1835 Predicted acyltransferases YP_007228233.1 COG0776 Bacterial nucleoid DNA-binding protein YP_007228235.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_007228236.1 COG3765 Chain length determinant protein YP_007228237.1 COG3765 Chain length determinant protein YP_007228238.1 COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase YP_007228239.1 COG0673 Predicted dehydrogenases and related proteins YP_007228240.1 COG1835 Predicted acyltransferases YP_007228241.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_007228242.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_007228243.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_007228244.1 COG3507 Beta-xylosidase YP_007228245.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_007228246.1 COG0438 Glycosyltransferase YP_007228247.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_007228248.1 COG0118 Glutamine amidotransferase YP_007228249.1 COG0107 Imidazoleglycerol-phosphate synthase YP_007228250.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_007228251.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_007228252.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_007228253.1 COG0438 Glycosyltransferase YP_007228254.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_007228255.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_007228256.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_007228257.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_007228258.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_007228259.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_007228260.1 COG1209 dTDP-glucose pyrophosphorylase YP_007228261.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_007228262.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_007228264.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_007228265.1 COG1968 Uncharacterized bacitracin resistance protein YP_007228266.1 COG0457 FOG: TPR repeat YP_007228267.1 COG2130 Putative NADP-dependent oxidoreductases YP_007228268.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007228269.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007228270.1 COG0840 Methyl-accepting chemotaxis protein YP_007228271.1 COG3135 Uncharacterized protein involved in benzoate metabolism YP_007228272.1 COG0625 Glutathione S-transferase YP_007228273.1 COG0695 Glutaredoxin and related proteins YP_007228274.1 COG0302 GTP cyclohydrolase I YP_007228275.1 COG2840 Uncharacterized protein conserved in bacteria YP_007228277.1 COG1335 Amidases related to nicotinamidase YP_007228278.1 COG2890 Methylase of polypeptide chain release factors YP_007228280.1 COG1073 Hydrolases of the alpha/beta superfamily YP_007228281.1 COG0477 Permeases of the major facilitator superfamily YP_007228282.1 COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_007228284.1 COG0666 FOG: Ankyrin repeat YP_007228286.1 COG0428 Predicted divalent heavy-metal cations transporter YP_007228288.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_007228291.1 COG2010 Cytochrome c, mono- and diheme variants YP_007228293.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_007228294.1 COG0598 Mg2+ and Co2+ transporters YP_007228295.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_007228296.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007228297.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007228299.1 COG0477 Permeases of the major facilitator superfamily YP_007228300.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007228301.1 COG0583 Transcriptional regulator YP_007228302.1 COG0782 Transcription elongation factor YP_007228304.1 COG4394 Uncharacterized protein conserved in bacteria YP_007228305.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_007228306.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_007228307.1 COG1846 Transcriptional regulators YP_007228308.1 COG0583 Transcriptional regulator YP_007228309.1 COG0730 Predicted permeases YP_007228310.1 COG0583 Transcriptional regulator YP_007228311.1 COG5457 Uncharacterized conserved small protein YP_007228312.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_007228313.1 COG0421 Spermidine synthase YP_007228314.1 COG0513 Superfamily II DNA and RNA helicases YP_007228315.1 COG3384 Uncharacterized conserved protein YP_007228316.1 COG0500 SAM-dependent methyltransferases YP_007228317.1 COG0501 Zn-dependent protease with chaperone function YP_007228318.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_007228319.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_007228320.1 COG0386 Glutathione peroxidase YP_007228321.1 COG0642 Signal transduction histidine kinase YP_007228322.1 COG2607 Predicted ATPase (AAA+ superfamily) YP_007228323.1 COG1956 GAF domain-containing protein YP_007228325.1 COG3539 P pilus assembly protein, pilin FimA YP_007228326.1 COG3188 P pilus assembly protein, porin PapC YP_007228327.1 COG3468 Type V secretory pathway, adhesin AidA YP_007228329.1 COG3121 P pilus assembly protein, chaperone PapD YP_007228330.1 COG3539 P pilus assembly protein, pilin FimA YP_007228333.1 COG1960 Acyl-CoA dehydrogenases YP_007228334.1 COG0625 Glutathione S-transferase YP_007228335.1 COG1131 ABC-type multidrug transport system, ATPase component YP_007228336.1 COG0842 ABC-type multidrug transport system, permease component YP_007228337.1 COG3216 Uncharacterized protein conserved in bacteria YP_007228338.1 COG0658 Predicted membrane metal-binding protein YP_007228339.1 COG0811 Biopolymer transport proteins YP_007228340.1 COG0848 Biopolymer transport protein YP_007228341.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_007228342.1 COG2835 Uncharacterized conserved protein YP_007228343.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_007228344.1 COG0394 Protein-tyrosine-phosphatase YP_007228345.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_007228346.1 COG1530 Ribonucleases G and E YP_007228347.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_007228348.1 COG0546 Predicted phosphatases YP_007228349.1 COG0616 Periplasmic serine proteases (ClpP class) YP_007228350.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_007228351.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_007228352.1 COG0333 Ribosomal protein L32 YP_007228353.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_007228354.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_007228355.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007228356.1 COG0236 Acyl carrier protein YP_007228357.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_007228358.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_007228359.1 COG1559 Predicted periplasmic solute-binding protein YP_007228360.1 COG0125 Thymidylate kinase YP_007228361.1 COG0470 ATPase involved in DNA replication YP_007228362.1 COG0084 Mg-dependent DNase YP_007228363.1 COG1309 Transcriptional regulator YP_007228364.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_007228366.1 COG3816 Uncharacterized protein conserved in bacteria YP_007228367.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_007228368.1 COG0590 Cytosine/adenosine deaminases YP_007228369.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_007228370.1 COG0556 Helicase subunit of the DNA excision repair complex YP_007228371.1 COG0477 Permeases of the major facilitator superfamily YP_007228372.1 COG1566 Multidrug resistance efflux pump YP_007228373.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_007228374.1 COG1309 Transcriptional regulator YP_007228375.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007228376.1 COG0824 Predicted thioesterase YP_007228377.1 COG0042 tRNA-dihydrouridine synthase YP_007228378.1 COG0071 Molecular chaperone (small heat shock protein) YP_007228379.1 COG2202 FOG: PAS/PAC domain YP_007228380.1 COG0583 Transcriptional regulator YP_007228381.1 COG0065 3-isopropylmalate dehydratase large subunit YP_007228382.1 COG0066 3-isopropylmalate dehydratase small subunit YP_007228383.1 COG0500 SAM-dependent methyltransferases YP_007228384.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_007228385.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_007228386.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_007228387.1 COG3170 Tfp pilus assembly protein FimV YP_007228388.1 COG0101 Pseudouridylate synthase YP_007228389.1 COG0135 Phosphoribosylanthranilate isomerase YP_007228390.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_007228391.1 COG0285 Folylpolyglutamate synthase YP_007228392.1 COG3147 Uncharacterized protein conserved in bacteria YP_007228393.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_007228394.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_007228395.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_007228396.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007228398.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007228399.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007228400.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007228401.1 COG0388 Predicted amidohydrolase YP_007228402.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_007228403.1 COG2515 1-aminocyclopropane-1-carboxylate deaminase YP_007228404.1 COG3038 Cytochrome B561 YP_007228405.1 COG3782 Uncharacterized protein conserved in bacteria YP_007228406.1 COG0061 Predicted sugar kinase YP_007228407.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_007228408.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_007228409.1 COG3139 Uncharacterized protein conserved in bacteria YP_007228411.1 COG0308 Aminopeptidase N YP_007228412.1 COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor YP_007228413.1 COG1033 Predicted exporters of the RND superfamily YP_007228415.1 COG2706 3-carboxymuconate cyclase YP_007228416.1 COG0625 Glutathione S-transferase YP_007228417.1 COG0419 ATPase involved in DNA repair YP_007228418.1 COG0420 DNA repair exonuclease YP_007228424.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_007228425.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_007228427.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_007228428.1 COG0714 MoxR-like ATPases YP_007228430.1 COG0477 Permeases of the major facilitator superfamily YP_007228431.1 COG3135 Uncharacterized protein involved in benzoate metabolism YP_007228432.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007228433.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_007228434.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_007228435.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_007228436.1 COG1960 Acyl-CoA dehydrogenases YP_007228437.1 COG0477 Permeases of the major facilitator superfamily YP_007228438.1 COG0583 Transcriptional regulator YP_007228441.1 COG2149 Predicted membrane protein YP_007228443.1 COG2015 Alkyl sulfatase and related hydrolases YP_007228444.1 COG0583 Transcriptional regulator YP_007228445.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_007228446.1 COG1960 Acyl-CoA dehydrogenases YP_007228447.1 COG1454 Alcohol dehydrogenase, class IV YP_007228448.1 COG0824 Predicted thioesterase YP_007228449.1 COG0183 Acetyl-CoA acetyltransferase YP_007228450.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_007228452.1 COG0789 Predicted transcriptional regulators YP_007228453.1 COG0845 Membrane-fusion protein YP_007228454.1 COG0841 Cation/multidrug efflux pump YP_007228455.1 COG2188 Transcriptional regulators YP_007228456.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007228457.1 COG0019 Diaminopimelate decarboxylase YP_007228458.1 COG0583 Transcriptional regulator YP_007228460.1 COG2902 NAD-specific glutamate dehydrogenase YP_007228461.1 COG1806 Uncharacterized protein conserved in bacteria YP_007228462.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_007228463.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007228464.1 COG0684 Demethylmenaquinone methyltransferase YP_007228465.1 COG0598 Mg2+ and Co2+ transporters YP_007228467.1 COG0668 Small-conductance mechanosensitive channel YP_007228468.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007228469.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007228470.1 COG0007 Uroporphyrinogen-III methylase YP_007228471.1 COG0631 Serine/threonine protein phosphatase YP_007228472.1 COG2223 Nitrate/nitrite transporter YP_007228473.1 COG3707 Response regulator with putative antiterminator output domain YP_007228474.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_007228475.1 COG0167 Dihydroorotate dehydrogenase YP_007228476.1 COG3130 Ribosome modulation factor YP_007228477.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_007228478.1 COG2202 FOG: PAS/PAC domain YP_007228479.1 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) YP_007228480.1 COG3171 Uncharacterized protein conserved in bacteria YP_007228481.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007228482.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007228483.1 COG0232 dGTP triphosphohydrolase YP_007228485.1 COG5393 Predicted membrane protein YP_007228486.1 COG4575 Uncharacterized conserved protein YP_007228487.1 COG0004 Ammonia permease YP_007228488.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_007228489.1 COG3108 Uncharacterized protein conserved in bacteria YP_007228491.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_007228492.1 COG2202 FOG: PAS/PAC domain YP_007228493.1 COG1048 Aconitase A YP_007228494.1 COG2933 Predicted SAM-dependent methyltransferase YP_007228495.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_007228496.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_007228498.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_007228499.1 COG0840 Methyl-accepting chemotaxis protein YP_007228500.1 COG0579 Predicted dehydrogenase YP_007228502.1 COG0521 Molybdopterin biosynthesis enzymes YP_007228503.1 COG0303 Molybdopterin biosynthesis enzyme YP_007228504.1 COG0438 Glycosyltransferase YP_007228505.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_007228506.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007228507.1 COG4564 Signal transduction histidine kinase YP_007228509.1 COG0835 Chemotaxis signal transduction protein YP_007228510.1 COG3217 Uncharacterized Fe-S protein YP_007228511.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_007228512.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_007228513.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007228515.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007228516.1 COG0183 Acetyl-CoA acetyltransferase YP_007228517.1 COG4728 Uncharacterized protein conserved in bacteria YP_007228518.1 COG0550 Topoisomerase IA YP_007228520.1 COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation YP_007228521.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_007228522.1 COG1309 Transcriptional regulator YP_007228523.1 COG1376 Uncharacterized protein conserved in bacteria YP_007228524.1 COG1472 Beta-glucosidase-related glycosidases YP_007228525.1 COG1472 Beta-glucosidase-related glycosidases YP_007228526.1 COG4715 Uncharacterized conserved protein YP_007228528.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_007228529.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_007228530.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_007228531.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_007228532.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_007228534.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_007228535.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_007228536.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_007228537.1 COG0642 Signal transduction histidine kinase YP_007228538.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007228539.1 COG2904 Uncharacterized protein conserved in bacteria YP_007228541.1 COG0637 Predicted phosphatase/phosphohexomutase YP_007228542.1 COG2853 Surface lipoprotein YP_007228544.1 COG0784 FOG: CheY-like receiver YP_007228545.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_007228547.1 COG0176 Transaldolase YP_007228548.1 COG0042 tRNA-dihydrouridine synthase YP_007228549.1 COG0582 Integrase YP_007228553.1 COG0270 Site-specific DNA methylase YP_007228557.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_007228563.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_007228572.1 COG0305 Replicative DNA helicase YP_007228580.1 COG3772 Phage-related lysozyme (muraminidase) YP_007228584.1 COG3728 Phage terminase, small subunit YP_007228599.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_007228601.1 COG2755 Lysophospholipase L1 and related esterases YP_007228602.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_007228606.1 COG0419 ATPase involved in DNA repair YP_007228607.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007228608.1 COG3000 Sterol desaturase YP_007228609.1 COG0726 Predicted xylanase/chitin deacetylase YP_007228610.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007228614.1 COG3575 Uncharacterized protein conserved in bacteria YP_007228619.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_007228621.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_007228622.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_007228623.1 COG3383 Uncharacterized anaerobic dehydrogenase YP_007228625.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007228626.1 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA YP_007228627.1 COG4575 Uncharacterized conserved protein YP_007228630.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007228631.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007228632.1 COG0583 Transcriptional regulator YP_007228633.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007228634.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_007228636.1 COG2133 Glucose/sorbosone dehydrogenases YP_007228637.1 COG1485 Predicted ATPase YP_007228638.1 COG2318 Uncharacterized protein conserved in bacteria YP_007228639.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007228640.1 COG1238 Predicted membrane protein YP_007228641.1 COG3019 Predicted metal-binding protein YP_007228644.1 COG0826 Collagenase and related proteases YP_007228645.1 COG0628 Predicted permease YP_007228646.1 COG0637 Predicted phosphatase/phosphohexomutase YP_007228647.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_007228648.1 COG0583 Transcriptional regulator YP_007228649.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007228650.1 COG4886 Leucine-rich repeat (LRR) protein YP_007228651.1 COG4886 Leucine-rich repeat (LRR) protein YP_007228652.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_007228653.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007228654.1 COG0183 Acetyl-CoA acetyltransferase YP_007228655.1 COG1960 Acyl-CoA dehydrogenases YP_007228656.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007228657.1 COG3385 FOG: Transposase and inactivated derivatives YP_007228659.1 COG1734 DnaK suppressor protein YP_007228664.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_007228665.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_007228666.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_007228667.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_007228668.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_007228669.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_007228670.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007228671.1 COG1396 Predicted transcriptional regulators YP_007228672.1 COG1335 Amidases related to nicotinamidase YP_007228673.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007228676.1 COG0006 Xaa-Pro aminopeptidase YP_007228678.1 COG5006 Predicted permease, DMT superfamily YP_007228679.1 COG4178 ABC-type uncharacterized transport system, permease and ATPase components YP_007228680.1 COG0477 Permeases of the major facilitator superfamily YP_007228681.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_007228682.1 COG0406 Fructose-2,6-bisphosphatase YP_007228683.1 COG0730 Predicted permeases YP_007228684.1 COG1396 Predicted transcriptional regulators YP_007228685.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007228686.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_007228687.1 COG3949 Uncharacterized membrane protein YP_007228688.1 COG0840 Methyl-accepting chemotaxis protein YP_007228689.1 COG0583 Transcriptional regulator YP_007228690.1 COG4125 Predicted membrane protein YP_007228692.1 COG1802 Transcriptional regulators YP_007228693.1 COG2186 Transcriptional regulators YP_007228694.1 COG1301 Na+/H+-dicarboxylate symporters YP_007228695.1 COG2202 FOG: PAS/PAC domain YP_007228696.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_007228697.1 COG1522 Transcriptional regulators YP_007228698.1 COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog YP_007228699.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_007228700.1 COG3839 ABC-type sugar transport systems, ATPase components YP_007228701.1 COG3839 ABC-type sugar transport systems, ATPase components YP_007228702.1 COG1175 ABC-type sugar transport systems, permease components YP_007228703.1 COG0395 ABC-type sugar transport system, permease component YP_007228704.1 COG5477 Predicted small integral membrane protein YP_007228705.1 COG1653 ABC-type sugar transport system, periplasmic component YP_007228706.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_007228708.1 COG4679 Phage-related protein YP_007228710.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_007228711.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_007228712.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_007228713.1 COG0466 ATP-dependent Lon protease, bacterial type YP_007228714.1 COG0776 Bacterial nucleoid DNA-binding protein YP_007228715.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_007228716.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_007228719.1 COG1946 Acyl-CoA thioesterase YP_007228721.1 COG0840 Methyl-accepting chemotaxis protein YP_007228722.1 COG0084 Mg-dependent DNase YP_007228723.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_007228724.1 COG2259 Predicted membrane protein YP_007228726.1 COG0782 Transcription elongation factor YP_007228727.1 COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component YP_007228728.1 COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component YP_007228729.1 COG2755 Lysophospholipase L1 and related esterases YP_007228730.1 COG1158 Transcription termination factor YP_007228731.1 COG1376 Uncharacterized protein conserved in bacteria YP_007228733.1 COG2388 Predicted acetyltransferase YP_007228734.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_007228735.1 COG1893 Ketopantoate reductase YP_007228736.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007228737.1 COG0583 Transcriptional regulator YP_007228738.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_007228739.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_007228740.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_007228742.1 COG4067 Uncharacterized protein conserved in archaea YP_007228743.1 COG1802 Transcriptional regulators YP_007228744.1 COG2513 PEP phosphonomutase and related enzymes YP_007228745.1 COG0372 Citrate synthase YP_007228746.1 COG1048 Aconitase A YP_007228747.1 COG2828 Uncharacterized protein conserved in bacteria YP_007228748.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_007228749.1 COG1049 Aconitase B YP_007228750.1 COG3313 Predicted Fe-S protein YP_007228751.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_007228753.1 COG3212 Predicted membrane protein YP_007228754.1 COG3212 Predicted membrane protein YP_007228755.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007228756.1 COG0642 Signal transduction histidine kinase YP_007228757.1 COG3448 CBS-domain-containing membrane protein YP_007228758.1 COG0583 Transcriptional regulator YP_007228759.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_007228760.1 COG1485 Predicted ATPase YP_007228761.1 COG5579 Uncharacterized conserved protein YP_007228763.1 COG0784 FOG: CheY-like receiver YP_007228764.1 COG0784 FOG: CheY-like receiver YP_007228765.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_007228766.1 COG5430 Uncharacterized secreted protein YP_007228767.1 COG5430 Uncharacterized secreted protein YP_007228768.1 COG5430 Uncharacterized secreted protein YP_007228769.1 COG5430 Uncharacterized secreted protein YP_007228770.1 COG3121 P pilus assembly protein, chaperone PapD YP_007228771.1 COG3188 P pilus assembly protein, porin PapC YP_007228772.1 COG5430 Uncharacterized secreted protein YP_007228773.1 COG2866 Predicted carboxypeptidase YP_007228774.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007228775.1 COG0477 Permeases of the major facilitator superfamily YP_007228777.1 COG2853 Surface lipoprotein YP_007228778.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007228779.1 COG0642 Signal transduction histidine kinase YP_007228780.1 COG3558 Uncharacterized protein conserved in bacteria YP_007228781.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_007228782.1 COG3749 Uncharacterized protein conserved in bacteria YP_007228783.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_007228784.1 COG1879 ABC-type sugar transport system, periplasmic component YP_007228787.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain YP_007228789.1 COG1835 Predicted acyltransferases YP_007228790.1 COG0316 Uncharacterized conserved protein YP_007228791.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_007228792.1 COG2847 Uncharacterized protein conserved in bacteria YP_007228794.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007228795.1 COG4392 Predicted membrane protein YP_007228796.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_007228797.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_007228799.1 COG1280 Putative threonine efflux protein YP_007228800.1 COG3403 Uncharacterized conserved protein YP_007228801.1 COG0583 Transcriptional regulator YP_007228802.1 COG0417 DNA polymerase elongation subunit (family B) YP_007228803.1 COG4886 Leucine-rich repeat (LRR) protein YP_007228806.1 COG3220 Uncharacterized protein conserved in bacteria YP_007228807.1 COG3219 Uncharacterized protein conserved in bacteria YP_007228808.1 COG2259 Predicted membrane protein YP_007228810.1 COG0642 Signal transduction histidine kinase YP_007228811.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007228813.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_007228814.1 COG0169 Shikimate 5-dehydrogenase YP_007228815.1 COG0757 3-dehydroquinate dehydratase II YP_007228816.1 COG1538 Outer membrane protein YP_007228817.1 COG0845 Membrane-fusion protein YP_007228818.1 COG3696 Putative silver efflux pump YP_007228819.1 COG0477 Permeases of the major facilitator superfamily YP_007228820.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007228822.1 COG1192 ATPases involved in chromosome partitioning YP_007228823.1 COG2199 FOG: GGDEF domain YP_007228826.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_007228827.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_007228828.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_007228829.1 COG3503 Predicted membrane protein YP_007228830.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007228831.1 COG0583 Transcriptional regulator YP_007228833.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_007228836.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007228838.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_007228839.1 COG0443 Molecular chaperone YP_007228840.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_007228841.1 COG1879 ABC-type sugar transport system, periplasmic component YP_007228842.1 COG1129 ABC-type sugar transport system, ATPase component YP_007228843.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_007228844.1 COG1609 Transcriptional regulators YP_007228845.1 COG0524 Sugar kinases, ribokinase family YP_007228846.1 COG1869 ABC-type ribose transport system, auxiliary component YP_007228847.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase YP_007228850.1 COG1278 Cold shock proteins YP_007228852.1 COG0441 Threonyl-tRNA synthetase YP_007228853.1 COG0290 Translation initiation factor 3 (IF-3) YP_007228854.1 COG0291 Ribosomal protein L35 YP_007228855.1 COG0292 Ribosomal protein L20 YP_007228856.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_007228857.1 COG0073 EMAP domain YP_007228858.1 COG0776 Bacterial nucleoid DNA-binding protein YP_007228859.1 COG0789 Predicted transcriptional regulators YP_007228860.1 COG0582 Integrase YP_007228862.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_007228870.1 COG0270 Site-specific DNA methylase YP_007228871.1 COG0621 2-methylthioadenine synthetase YP_007228891.1 COG1396 Predicted transcriptional regulators YP_007228892.1 COG1396 Predicted transcriptional regulators YP_007228898.1 COG0305 Replicative DNA helicase YP_007228904.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_007228911.1 COG0638 20S proteasome, alpha and beta subunits YP_007228915.1 COG5585 NAD+--asparagine ADP-ribosyltransferase YP_007228918.1 COG0009 Putative translation factor (SUA5) YP_007228923.1 COG0666 FOG: Ankyrin repeat YP_007228924.1 COG5492 Bacterial surface proteins containing Ig-like domains YP_007228927.1 COG1396 Predicted transcriptional regulators YP_007228928.1 COG3646 Uncharacterized phage-encoded protein YP_007228932.1 COG5281 Phage-related minor tail protein YP_007228935.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_007228939.1 COG4678 Muramidase (phage lambda lysozyme) YP_007228940.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_007228944.1 COG2378 Predicted transcriptional regulator YP_007228946.1 COG1397 ADP-ribosylglycohydrolase YP_007228947.1 COG3293 Transposase and inactivated derivatives YP_007228948.1 COG3293 Transposase and inactivated derivatives YP_007228951.1 COG4735 Uncharacterized protein conserved in bacteria YP_007228952.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_007228953.1 COG0486 Predicted GTPase YP_007228954.1 COG0699 Predicted GTPases (dynamin-related) YP_007228956.1 COG1159 GTPase YP_007228958.1 COG1479 Uncharacterized conserved protein YP_007228959.1 COG1479 Uncharacterized conserved protein YP_007228961.1 COG1360 Flagellar motor protein YP_007228963.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_007228964.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_007228968.1 COG0270 Site-specific DNA methylase YP_007228969.1 COG3727 DNA G:T-mismatch repair endonuclease YP_007228974.1 COG1418 Predicted HD superfamily hydrolase YP_007228975.1 COG2203 FOG: GAF domain YP_007228976.1 COG2066 Glutaminase YP_007228977.1 COG2186 Transcriptional regulators YP_007228978.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_007228979.1 COG0477 Permeases of the major facilitator superfamily YP_007228980.1 COG3802 Uncharacterized protein conserved in bacteria YP_007228981.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007228982.1 COG5486 Predicted metal-binding integral membrane protein YP_007228983.1 COG5588 Uncharacterized conserved protein YP_007228987.1 COG2873 O-acetylhomoserine sulfhydrylase YP_007228990.1 COG4126 Hydantoin racemase YP_007228991.1 COG3535 Uncharacterized conserved protein YP_007228992.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007228995.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007228996.1 COG1480 Predicted membrane-associated HD superfamily hydrolase YP_007228999.1 COG2814 Arabinose efflux permease YP_007229000.1 COG0625 Glutathione S-transferase YP_007229003.1 COG1943 Transposase and inactivated derivatives YP_007229005.1 COG2814 Arabinose efflux permease YP_007229006.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_007229007.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_007229008.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_007229009.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_007229011.1 COG0583 Transcriptional regulator YP_007229012.1 COG0477 Permeases of the major facilitator superfamily YP_007229013.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_007229014.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_007229015.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007229016.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007229017.1 COG4106 Trans-aconitate methyltransferase YP_007229019.1 COG0583 Transcriptional regulator YP_007229020.1 COG2271 Sugar phosphate permease YP_007229021.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007229022.1 COG0217 Uncharacterized conserved protein YP_007229023.1 COG0583 Transcriptional regulator YP_007229024.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_007229025.1 COG0477 Permeases of the major facilitator superfamily YP_007229026.1 COG1082 Sugar phosphate isomerases/epimerases YP_007229027.1 COG0500 SAM-dependent methyltransferases YP_007229028.1 COG2059 Chromate transport protein ChrA YP_007229029.1 COG2202 FOG: PAS/PAC domain YP_007229030.1 COG1538 Outer membrane protein YP_007229031.1 COG0845 Membrane-fusion protein YP_007229032.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components YP_007229033.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_007229034.1 COG0583 Transcriptional regulator YP_007229035.1 COG1335 Amidases related to nicotinamidase YP_007229036.1 COG1741 Pirin-related protein YP_007229037.1 COG0210 Superfamily I DNA and RNA helicases YP_007229038.1 COG4886 Leucine-rich repeat (LRR) protein YP_007229039.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007229040.1 COG0346 Lactoylglutathione lyase and related lyases YP_007229041.1 COG0477 Permeases of the major facilitator superfamily YP_007229044.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_007229046.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229047.1 COG0457 FOG: TPR repeat YP_007229048.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007229049.1 COG0642 Signal transduction histidine kinase YP_007229050.1 COG0346 Lactoylglutathione lyase and related lyases YP_007229052.1 COG0583 Transcriptional regulator YP_007229054.1 COG2995 Uncharacterized paraquat-inducible protein A YP_007229055.1 COG2995 Uncharacterized paraquat-inducible protein A YP_007229056.1 COG3008 Paraquat-inducible protein B YP_007229058.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_007229061.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229062.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_007229063.1 COG0531 Amino acid transporters YP_007229064.1 COG2771 DNA-binding HTH domain-containing proteins YP_007229065.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_007229066.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007229067.1 COG0840 Methyl-accepting chemotaxis protein YP_007229069.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_007229070.1 COG1414 Transcriptional regulator YP_007229071.1 COG0673 Predicted dehydrogenases and related proteins YP_007229072.1 COG1082 Sugar phosphate isomerases/epimerases YP_007229073.1 COG0477 Permeases of the major facilitator superfamily YP_007229074.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_007229076.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_007229077.1 COG0169 Shikimate 5-dehydrogenase YP_007229078.1 COG1414 Transcriptional regulator YP_007229079.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_007229080.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007229081.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_007229082.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_007229083.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_007229084.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_007229085.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_007229086.1 COG1414 Transcriptional regulator YP_007229087.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_007229088.1 COG0583 Transcriptional regulator YP_007229089.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_007229090.1 COG2049 Allophanate hydrolase subunit 1 YP_007229091.1 COG1984 Allophanate hydrolase subunit 2 YP_007229092.1 COG3455 Uncharacterized protein conserved in bacteria YP_007229093.1 COG3501 Uncharacterized protein conserved in bacteria YP_007229097.1 COG4104 Uncharacterized conserved protein YP_007229098.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_007229099.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_007229100.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007229102.1 COG0457 FOG: TPR repeat YP_007229103.1 COG0840 Methyl-accepting chemotaxis protein YP_007229105.1 COG3158 K+ transporter YP_007229106.1 COG2814 Arabinose efflux permease YP_007229107.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007229109.1 COG3668 Plasmid stabilization system protein YP_007229110.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_007229111.1 COG0573 ABC-type phosphate transport system, permease component YP_007229112.1 COG0581 ABC-type phosphate transport system, permease component YP_007229113.1 COG1117 ABC-type phosphate transport system, ATPase component YP_007229114.1 COG3177 Uncharacterized conserved protein YP_007229115.1 COG0637 Predicted phosphatase/phosphohexomutase YP_007229116.1 COG1396 Predicted transcriptional regulators YP_007229117.1 COG0174 Glutamine synthetase YP_007229118.1 COG2071 Predicted glutamine amidotransferases YP_007229119.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_007229120.1 COG1396 Predicted transcriptional regulators YP_007229121.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229123.1 COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase YP_007229124.1 COG4338 Uncharacterized protein conserved in bacteria YP_007229126.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_007229127.1 COG3496 Uncharacterized conserved protein YP_007229128.1 COG2907 Predicted NAD/FAD-binding protein YP_007229129.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229131.1 COG2202 FOG: PAS/PAC domain YP_007229132.1 COG0789 Predicted transcriptional regulators YP_007229134.1 COG3287 Uncharacterized conserved protein YP_007229135.1 COG0642 Signal transduction histidine kinase YP_007229136.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007229137.1 COG0607 Rhodanese-related sulfurtransferase YP_007229138.1 COG0842 ABC-type multidrug transport system, permease component YP_007229139.1 COG1131 ABC-type multidrug transport system, ATPase component YP_007229140.1 COG3391 Uncharacterized conserved protein YP_007229142.1 COG4585 Signal transduction histidine kinase YP_007229143.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007229144.1 COG1357 Uncharacterized low-complexity proteins YP_007229145.1 COG4993 Glucose dehydrogenase YP_007229146.1 COG2010 Cytochrome c, mono- and diheme variants YP_007229147.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007229149.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_007229150.1 COG4993 Glucose dehydrogenase YP_007229151.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007229154.1 COG1454 Alcohol dehydrogenase, class IV YP_007229155.1 COG0642 Signal transduction histidine kinase YP_007229156.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_007229159.1 COG0708 Exonuclease III YP_007229161.1 COG0668 Small-conductance mechanosensitive channel YP_007229163.1 COG2846 Regulator of cell morphogenesis and NO signaling YP_007229164.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_007229166.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_007229167.1 COG3647 Predicted membrane protein YP_007229169.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007229170.1 COG2128 Uncharacterized conserved protein YP_007229171.1 COG0695 Glutaredoxin and related proteins YP_007229172.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007229173.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007229174.1 COG1402 Uncharacterized protein, putative amidase YP_007229175.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007229176.1 COG0006 Xaa-Pro aminopeptidase YP_007229177.1 COG0662 Mannose-6-phosphate isomerase YP_007229178.1 COG0583 Transcriptional regulator YP_007229179.1 COG0583 Transcriptional regulator YP_007229180.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_007229181.1 COG0477 Permeases of the major facilitator superfamily YP_007229182.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_007229183.1 COG0431 Predicted flavoprotein YP_007229184.1 COG0798 Arsenite efflux pump ACR3 and related permeases YP_007229185.1 COG0640 Predicted transcriptional regulators YP_007229186.1 COG0583 Transcriptional regulator YP_007229187.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_007229188.1 COG1145 Ferredoxin YP_007229189.1 COG0583 Transcriptional regulator YP_007229190.1 COG2828 Uncharacterized protein conserved in bacteria YP_007229191.1 COG1301 Na+/H+-dicarboxylate symporters YP_007229192.1 COG2851 H+/citrate symporter YP_007229194.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007229195.1 COG2199 FOG: GGDEF domain YP_007229196.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_007229197.1 COG0789 Predicted transcriptional regulators YP_007229198.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007229199.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_007229200.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007229201.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229202.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_007229203.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229204.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007229205.1 COG0607 Rhodanese-related sulfurtransferase YP_007229206.1 COG3666 Transposase and inactivated derivatives YP_007229207.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229208.1 COG0583 Transcriptional regulator YP_007229209.1 COG1893 Ketopantoate reductase YP_007229210.1 COG0346 Lactoylglutathione lyase and related lyases YP_007229211.1 COG2030 Acyl dehydratase YP_007229212.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase YP_007229213.1 COG0169 Shikimate 5-dehydrogenase YP_007229214.1 COG3484 Predicted proteasome-type protease YP_007229215.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_007229216.1 COG2307 Uncharacterized protein conserved in bacteria YP_007229217.1 COG2308 Uncharacterized conserved protein YP_007229218.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229219.1 COG0477 Permeases of the major facilitator superfamily YP_007229221.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007229223.1 COG2202 FOG: PAS/PAC domain YP_007229224.1 COG0583 Transcriptional regulator YP_007229225.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_007229226.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_007229227.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_007229228.1 COG2986 Histidine ammonia-lyase YP_007229229.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229230.1 COG0668 Small-conductance mechanosensitive channel YP_007229231.1 COG3174 Predicted membrane protein YP_007229232.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_007229234.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007229235.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229236.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007229237.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_007229238.1 COG0448 ADP-glucose pyrophosphorylase YP_007229239.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229241.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_007229242.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_007229243.1 COG0071 Molecular chaperone (small heat shock protein) YP_007229244.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_007229246.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_007229247.1 COG0236 Acyl carrier protein YP_007229248.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_007229250.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_007229251.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_007229252.1 COG4992 Ornithine/acetylornithine aminotransferase YP_007229253.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229254.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229255.1 COG2834 Outer membrane lipoprotein-sorting protein YP_007229256.1 COG1033 Predicted exporters of the RND superfamily YP_007229257.1 COG0789 Predicted transcriptional regulators YP_007229258.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_007229259.1 COG0583 Transcriptional regulator YP_007229260.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_007229262.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007229264.1 COG1199 Rad3-related DNA helicases YP_007229265.1 COG3213 Uncharacterized protein involved in response to NO YP_007229266.1 COG0582 Integrase YP_007229267.1 COG0829 Urease accessory protein UreH YP_007229268.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_007229269.1 COG0832 Urea amidohydrolase (urease) beta subunit YP_007229270.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_007229271.1 COG2371 Urease accessory protein UreE YP_007229272.1 COG2370 Hydrogenase/urease accessory protein YP_007229273.1 COG0830 Urease accessory protein UreF YP_007229274.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_007229275.1 COG4312 Uncharacterized protein conserved in bacteria YP_007229276.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_007229279.1 COG3271 Predicted double-glycine peptidase YP_007229283.1 COG3172 Predicted ATPase/kinase involved in NAD metabolism YP_007229284.1 COG3201 Nicotinamide mononucleotide transporter YP_007229285.1 COG0840 Methyl-accepting chemotaxis protein YP_007229286.1 COG1968 Uncharacterized bacitracin resistance protein YP_007229287.1 COG3326 Predicted membrane protein YP_007229288.1 COG2315 Uncharacterized protein conserved in bacteria YP_007229289.1 COG0583 Transcriptional regulator YP_007229290.1 COG1182 Acyl carrier protein phosphodiesterase YP_007229291.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_007229292.1 COG1396 Predicted transcriptional regulators YP_007229293.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_007229294.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007229295.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_007229296.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007229297.1 COG0393 Uncharacterized conserved protein YP_007229301.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_007229302.1 COG0385 Predicted Na+-dependent transporter YP_007229303.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_007229304.1 COG1309 Transcriptional regulator YP_007229305.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229306.1 COG3917 2-hydroxychromene-2-carboxylate isomerase YP_007229307.1 COG1396 Predicted transcriptional regulators YP_007229308.1 COG0477 Permeases of the major facilitator superfamily YP_007229309.1 COG3038 Cytochrome B561 YP_007229310.1 COG0753 Catalase YP_007229311.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007229312.1 COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor) YP_007229313.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007229315.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_007229317.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_007229318.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007229324.1 COG3209 Rhs family protein YP_007229326.1 COG0583 Transcriptional regulator YP_007229327.1 COG4125 Predicted membrane protein YP_007229328.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_007229329.1 COG0523 Putative GTPases (G3E family) YP_007229330.1 COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases YP_007229331.1 COG1239 Mg-chelatase subunit ChlI YP_007229332.1 COG1240 Mg-chelatase subunit ChlD YP_007229334.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007229335.1 COG0625 Glutathione S-transferase YP_007229336.1 COG4188 Predicted dienelactone hydrolase YP_007229337.1 COG0477 Permeases of the major facilitator superfamily YP_007229338.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_007229341.1 COG2135 Uncharacterized conserved protein YP_007229342.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_007229343.1 COG1858 Cytochrome c peroxidase YP_007229344.1 COG0642 Signal transduction histidine kinase YP_007229348.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_007229349.1 COG1538 Outer membrane protein YP_007229350.1 COG1301 Na+/H+-dicarboxylate symporters YP_007229354.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_007229355.1 COG0789 Predicted transcriptional regulators YP_007229357.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_007229358.1 COG2175 Probable taurine catabolism dioxygenase YP_007229359.1 COG3246 Uncharacterized conserved protein YP_007229360.1 COG0477 Permeases of the major facilitator superfamily YP_007229361.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_007229362.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_007229363.1 COG2855 Predicted membrane protein YP_007229364.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007229365.1 COG3545 Predicted esterase of the alpha/beta hydrolase fold YP_007229368.1 COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor YP_007229369.1 COG1033 Predicted exporters of the RND superfamily YP_007229370.1 COG1960 Acyl-CoA dehydrogenases YP_007229371.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_007229372.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_007229374.1 COG0388 Predicted amidohydrolase YP_007229376.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_007229377.1 COG1280 Putative threonine efflux protein YP_007229378.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007229379.1 COG1280 Putative threonine efflux protein YP_007229380.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_007229381.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_007229382.1 COG4574 Serine protease inhibitor ecotin YP_007229383.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229384.1 COG2610 H+/gluconate symporter and related permeases YP_007229385.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_007229386.1 COG3209 Rhs family protein YP_007229387.1 COG4239 ABC-type uncharacterized transport system, permease component YP_007229388.1 COG4174 ABC-type uncharacterized transport system, permease component YP_007229389.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_007229390.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_007229391.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_007229392.1 COG1881 Phospholipid-binding protein YP_007229394.1 COG2356 Endonuclease I YP_007229396.1 COG2814 Arabinose efflux permease YP_007229397.1 COG0583 Transcriptional regulator YP_007229398.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_007229399.1 COG0531 Amino acid transporters YP_007229400.1 COG0388 Predicted amidohydrolase YP_007229401.1 COG2771 DNA-binding HTH domain-containing proteins YP_007229402.1 COG0125 Thymidylate kinase YP_007229404.1 COG2391 Predicted transporter component YP_007229405.1 COG2391 Predicted transporter component YP_007229406.1 COG0678 Peroxiredoxin YP_007229407.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_007229410.1 COG1801 Uncharacterized conserved protein YP_007229416.1 COG0583 Transcriptional regulator YP_007229417.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_007229418.1 COG3967 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) YP_007229419.1 COG0300 Short-chain dehydrogenases of various substrate specificities YP_007229420.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007229421.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007229426.1 COG1522 Transcriptional regulators YP_007229427.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007229428.1 COG1335 Amidases related to nicotinamidase YP_007229429.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_007229430.1 COG0583 Transcriptional regulator YP_007229432.1 COG1186 Protein chain release factor B YP_007229433.1 COG0477 Permeases of the major facilitator superfamily YP_007229434.1 COG1414 Transcriptional regulator YP_007229435.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007229436.1 COG1042 Acyl-CoA synthetase (NDP forming) YP_007229437.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_007229438.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_007229439.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_007229441.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007229442.1 COG3180 Putative ammonia monooxygenase YP_007229443.1 COG0583 Transcriptional regulator YP_007229444.1 COG0183 Acetyl-CoA acetyltransferase YP_007229445.1 COG0583 Transcriptional regulator YP_007229446.1 COG0388 Predicted amidohydrolase YP_007229447.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007229448.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_007229449.1 COG3386 Gluconolactonase YP_007229450.1 COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_007229451.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229452.1 COG2128 Uncharacterized conserved protein YP_007229453.1 COG1301 Na+/H+-dicarboxylate symporters YP_007229454.1 COG0583 Transcriptional regulator YP_007229455.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007229456.1 COG0066 3-isopropylmalate dehydratase small subunit YP_007229457.1 COG3327 Phenylacetic acid-responsive transcriptional repressor YP_007229458.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_007229459.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007229460.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007229461.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_007229462.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_007229463.1 COG0183 Acetyl-CoA acetyltransferase YP_007229464.1 COG1541 Coenzyme F390 synthetase YP_007229465.1 COG3396 Uncharacterized conserved protein YP_007229466.1 COG3460 Uncharacterized enzyme of phenylacetate metabolism YP_007229467.1 COG3396 Uncharacterized conserved protein YP_007229468.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_007229469.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_007229470.1 COG3162 Predicted membrane protein YP_007229471.1 COG4147 Predicted symporter YP_007229473.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007229475.1 COG3729 General stress protein YP_007229476.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_007229477.1 COG1051 ADP-ribose pyrophosphatase YP_007229478.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_007229479.1 COG5478 Predicted small integral membrane protein YP_007229480.1 COG1801 Uncharacterized conserved protein YP_007229481.1 COG3568 Metal-dependent hydrolase YP_007229482.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_007229483.1 COG0392 Predicted integral membrane protein YP_007229487.1 COG1793 ATP-dependent DNA ligase YP_007229488.1 COG1960 Acyl-CoA dehydrogenases YP_007229489.1 COG2120 Uncharacterized proteins, LmbE homologs YP_007229490.1 COG0500 SAM-dependent methyltransferases YP_007229491.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_007229492.1 COG1273 Uncharacterized conserved protein YP_007229493.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229494.1 COG0775 Nucleoside phosphorylase YP_007229495.1 COG2170 Uncharacterized conserved protein YP_007229496.1 COG2890 Methylase of polypeptide chain release factors YP_007229497.1 COG0225 Peptide methionine sulfoxide reductase YP_007229500.1 COG0477 Permeases of the major facilitator superfamily YP_007229501.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_007229502.1 COG2837 Predicted iron-dependent peroxidase YP_007229503.1 COG0385 Predicted Na+-dependent transporter YP_007229505.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229506.1 COG2199 FOG: GGDEF domain YP_007229507.1 COG3652 Predicted outer membrane protein YP_007229510.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_007229511.1 COG0819 Putative transcription activator YP_007229512.1 COG0819 Putative transcription activator YP_007229513.1 COG2132 Putative multicopper oxidases YP_007229514.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_007229515.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_007229516.1 COG0582 Integrase YP_007229517.1 COG3386 Gluconolactonase YP_007229518.1 COG1929 Glycerate kinase YP_007229519.1 COG3835 Sugar diacid utilization regulator YP_007229520.1 COG0477 Permeases of the major facilitator superfamily YP_007229521.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_007229522.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_007229523.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_007229524.1 COG0583 Transcriptional regulator YP_007229526.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_007229528.1 COG3135 Uncharacterized protein involved in benzoate metabolism YP_007229529.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_007229530.1 COG0477 Permeases of the major facilitator superfamily YP_007229531.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229532.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_007229533.1 COG5517 Small subunit of phenylpropionate dioxygenase YP_007229534.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit YP_007229535.1 COG3209 Rhs family protein YP_007229536.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007229538.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_007229539.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007229540.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007229544.1 COG0583 Transcriptional regulator YP_007229545.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007229546.1 COG0210 Superfamily I DNA and RNA helicases YP_007229547.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007229548.1 COG0174 Glutamine synthetase YP_007229549.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007229550.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007229551.1 COG2944 Predicted transcriptional regulator YP_007229553.1 COG1760 L-serine deaminase YP_007229554.1 COG0583 Transcriptional regulator YP_007229555.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_007229556.1 COG1922 Teichoic acid biosynthesis proteins YP_007229557.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_007229558.1 COG0438 Glycosyltransferase YP_007229559.1 COG2990 Uncharacterized protein conserved in bacteria YP_007229560.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_007229561.1 COG1045 Serine acetyltransferase YP_007229562.1 COG1216 Predicted glycosyltransferases YP_007229563.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_007229564.1 COG2303 Choline dehydrogenase and related flavoproteins YP_007229565.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_007229568.1 COG1087 UDP-glucose 4-epimerase YP_007229569.1 COG0489 ATPases involved in chromosome partitioning YP_007229570.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_007229572.1 COG1596 Periplasmic protein involved in polysaccharide export YP_007229574.1 COG1396 Predicted transcriptional regulators YP_007229575.1 COG2031 Short chain fatty acids transporter YP_007229576.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_007229577.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_007229578.1 COG0583 Transcriptional regulator YP_007229579.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_007229580.1 COG0587 DNA polymerase III, alpha subunit YP_007229581.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_007229583.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_007229586.1 COG0210 Superfamily I DNA and RNA helicases YP_007229587.1 COG3593 Predicted ATP-dependent endonuclease of the OLD family YP_007229589.1 COG1309 Transcriptional regulator YP_007229591.1 COG0840 Methyl-accepting chemotaxis protein YP_007229594.1 COG1309 Transcriptional regulator YP_007229595.1 COG1538 Outer membrane protein YP_007229596.1 COG0841 Cation/multidrug efflux pump YP_007229597.1 COG0845 Membrane-fusion protein YP_007229598.1 COG1309 Transcriptional regulator YP_007229600.1 COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin YP_007229601.1 COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor YP_007229602.1 COG1033 Predicted exporters of the RND superfamily YP_007229606.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007229607.1 COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin YP_007229608.1 COG1309 Transcriptional regulator YP_007229609.1 COG2072 Predicted flavoprotein involved in K+ transport YP_007229610.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007229611.1 COG1454 Alcohol dehydrogenase, class IV YP_007229612.1 COG0531 Amino acid transporters YP_007229613.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007229614.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_007229615.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_007229616.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_007229617.1 COG4147 Predicted symporter YP_007229618.1 COG3162 Predicted membrane protein YP_007229619.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_007229620.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229621.1 COG1960 Acyl-CoA dehydrogenases YP_007229623.1 COG3173 Predicted aminoglycoside phosphotransferase YP_007229624.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_007229626.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_007229627.1 COG1475 Predicted transcriptional regulators YP_007229628.1 COG1475 Predicted transcriptional regulators YP_007229630.1 COG0582 Integrase YP_007229635.1 COG4188 Predicted dienelactone hydrolase YP_007229637.1 COG0637 Predicted phosphatase/phosphohexomutase YP_007229638.1 COG0583 Transcriptional regulator YP_007229639.1 COG1414 Transcriptional regulator YP_007229640.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_007229641.1 COG0477 Permeases of the major facilitator superfamily YP_007229642.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_007229647.1 COG3209 Rhs family protein YP_007229648.1 COG5435 Uncharacterized conserved protein YP_007229650.1 COG3501 Uncharacterized protein conserved in bacteria YP_007229652.1 COG0395 ABC-type sugar transport system, permease component YP_007229655.1 COG3516 Uncharacterized protein conserved in bacteria YP_007229656.1 COG3517 Uncharacterized protein conserved in bacteria YP_007229657.1 COG3518 Uncharacterized protein conserved in bacteria YP_007229658.1 COG3519 Uncharacterized protein conserved in bacteria YP_007229659.1 COG3520 Uncharacterized protein conserved in bacteria YP_007229660.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_007229661.1 COG3521 Uncharacterized protein conserved in bacteria YP_007229662.1 COG3522 Uncharacterized protein conserved in bacteria YP_007229663.1 COG3455 Uncharacterized protein conserved in bacteria YP_007229664.1 COG3523 Uncharacterized protein conserved in bacteria YP_007229665.1 COG3913 Uncharacterized protein conserved in bacteria YP_007229666.1 COG3523 Uncharacterized protein conserved in bacteria YP_007229667.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_007229668.1 COG3515 Uncharacterized protein conserved in bacteria YP_007229669.1 COG0178 Excinuclease ATPase subunit YP_007229670.1 COG0477 Permeases of the major facilitator superfamily YP_007229671.1 COG1566 Multidrug resistance efflux pump YP_007229673.1 COG0679 Predicted permeases YP_007229674.1 COG0477 Permeases of the major facilitator superfamily YP_007229675.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_007229676.1 COG0477 Permeases of the major facilitator superfamily YP_007229677.1 COG0524 Sugar kinases, ribokinase family YP_007229678.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_007229679.1 COG1609 Transcriptional regulators YP_007229680.1 COG2010 Cytochrome c, mono- and diheme variants YP_007229681.1 COG2303 Choline dehydrogenase and related flavoproteins YP_007229687.1 COG3145 Alkylated DNA repair protein YP_007229691.1 COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase YP_007229692.1 COG1741 Pirin-related protein YP_007229693.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007229694.1 COG1280 Putative threonine efflux protein YP_007229695.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229697.1 COG5446 Predicted integral membrane protein YP_007229698.1 COG2073 Cobalamin biosynthesis protein CbiG YP_007229699.1 COG2875 Precorrin-4 methylase YP_007229700.1 COG3813 Uncharacterized protein conserved in bacteria YP_007229701.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007229702.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007229703.1 COG2202 FOG: PAS/PAC domain YP_007229704.1 COG1609 Transcriptional regulators YP_007229705.1 COG3265 Gluconate kinase YP_007229706.1 COG2610 H+/gluconate symporter and related permeases YP_007229708.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007229709.1 COG0642 Signal transduction histidine kinase YP_007229710.1 COG0642 Signal transduction histidine kinase YP_007229711.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_007229712.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_007229713.1 COG1459 Type II secretory pathway, component PulF YP_007229714.1 COG0845 Membrane-fusion protein YP_007229715.1 COG0841 Cation/multidrug efflux pump YP_007229716.1 COG1538 Outer membrane protein YP_007229717.1 COG0457 FOG: TPR repeat YP_007229718.1 COG0642 Signal transduction histidine kinase YP_007229719.1 COG2202 FOG: PAS/PAC domain YP_007229720.1 COG0693 Putative intracellular protease/amidase YP_007229722.1 COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins YP_007229723.1 COG2200 FOG: EAL domain YP_007229724.1 COG2962 Predicted permeases YP_007229725.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_007229726.1 COG1280 Putative threonine efflux protein YP_007229727.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007229730.1 COG4886 Leucine-rich repeat (LRR) protein YP_007229731.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007229732.1 COG2764 Uncharacterized protein conserved in bacteria YP_007229733.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_007229734.1 COG1171 Threonine dehydratase YP_007229735.1 COG4125 Predicted membrane protein YP_007229736.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_007229737.1 COG0457 FOG: TPR repeat YP_007229739.1 COG2199 FOG: GGDEF domain YP_007229740.1 COG0642 Signal transduction histidine kinase YP_007229741.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007229742.1 COG0845 Membrane-fusion protein YP_007229743.1 COG0841 Cation/multidrug efflux pump YP_007229744.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_007229745.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_007229746.1 COG3391 Uncharacterized conserved protein YP_007229748.1 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) YP_007229750.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007229752.1 COG0644 Dehydrogenases (flavoproteins) YP_007229753.1 COG1404 Subtilisin-like serine proteases YP_007229754.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_007229755.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_007229757.1 COG3501 Uncharacterized protein conserved in bacteria YP_007229763.1 COG1462 Uncharacterized protein involved in formation of curli polymers YP_007229764.1 COG3209 Rhs family protein YP_007229767.1 COG1462 Uncharacterized protein involved in formation of curli polymers YP_007229771.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_007229773.1 COG0457 FOG: TPR repeat YP_007229778.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_007229779.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007229780.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_007229781.1 COG2010 Cytochrome c, mono- and diheme variants YP_007229782.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_007229783.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_007229784.1 COG3391 Uncharacterized conserved protein YP_007229788.1 COG0642 Signal transduction histidine kinase YP_007229789.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_007229791.1 COG0018 Arginyl-tRNA synthetase YP_007229792.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_007229794.1 COG1767 Triphosphoribosyl-dephospho-CoA synthetase YP_007229795.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_007229796.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007229797.1 COG1960 Acyl-CoA dehydrogenases YP_007229798.1 COG0583 Transcriptional regulator YP_007229799.1 COG0371 Glycerol dehydrogenase and related enzymes YP_007229800.1 COG2384 Predicted SAM-dependent methyltransferase YP_007229801.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_007229802.1 COG0826 Collagenase and related proteases YP_007229803.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_007229804.1 COG2964 Uncharacterized protein conserved in bacteria YP_007229805.1 COG1171 Threonine dehydratase YP_007229806.1 COG0019 Diaminopimelate decarboxylase YP_007229807.1 COG1748 Saccharopine dehydrogenase and related proteins YP_007229808.1 COG0693 Putative intracellular protease/amidase YP_007229809.1 COG0583 Transcriptional regulator YP_007229810.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_007229811.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_007229812.1 COG0579 Predicted dehydrogenase YP_007229813.1 COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif YP_007229815.1 COG0366 Glycosidases YP_007229816.1 COG0307 Riboflavin synthase alpha chain YP_007229817.1 COG3619 Predicted membrane protein YP_007229818.1 COG0477 Permeases of the major facilitator superfamily YP_007229819.1 COG0113 Delta-aminolevulinic acid dehydratase YP_007229820.1 COG1718 Serine/threonine protein kinase involved in cell cycle control YP_007229821.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007229822.1 COG0579 Predicted dehydrogenase YP_007229824.1 COG1802 Transcriptional regulators YP_007229825.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007229826.1 COG0642 Signal transduction histidine kinase YP_007229827.1 COG0215 Cysteinyl-tRNA synthetase YP_007229828.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_007229829.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_007229830.1 COG2908 Uncharacterized protein conserved in bacteria YP_007229831.1 COG2366 Protein related to penicillin acylase YP_007229832.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_007229838.1 COG2911 Uncharacterized protein conserved in bacteria YP_007229839.1 COG0729 Outer membrane protein YP_007229840.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229841.1 COG0708 Exonuclease III YP_007229842.1 COG1309 Transcriptional regulator YP_007229843.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_007229844.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_007229845.1 COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization YP_007229847.1 COG0583 Transcriptional regulator YP_007229848.1 COG0405 Gamma-glutamyltransferase YP_007229849.1 COG0666 FOG: Ankyrin repeat YP_007229850.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_007229851.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007229852.1 COG0789 Predicted transcriptional regulators YP_007229853.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_007229854.1 COG1285 Uncharacterized membrane protein YP_007229856.1 COG0348 Polyferredoxin YP_007229857.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007229858.1 COG0642 Signal transduction histidine kinase YP_007229859.1 COG2202 FOG: PAS/PAC domain YP_007229860.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229861.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_007229862.1 COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC YP_007229863.1 COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD YP_007229864.1 COG0477 Permeases of the major facilitator superfamily YP_007229865.1 COG1566 Multidrug resistance efflux pump YP_007229866.1 COG1846 Transcriptional regulators YP_007229867.1 COG4566 Response regulator YP_007229868.1 COG2202 FOG: PAS/PAC domain YP_007229869.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_007229870.1 COG1960 Acyl-CoA dehydrogenases YP_007229871.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_007229872.1 COG2056 Predicted permease YP_007229873.1 COG0840 Methyl-accepting chemotaxis protein YP_007229874.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_007229875.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_007229876.1 COG0583 Transcriptional regulator YP_007229877.1 COG0679 Predicted permeases YP_007229878.1 COG3773 Cell wall hydrolyses involved in spore germination YP_007229879.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_007229880.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007229881.1 COG1280 Putative threonine efflux protein YP_007229882.1 COG0477 Permeases of the major facilitator superfamily YP_007229883.1 COG0583 Transcriptional regulator YP_007229885.1 COG4993 Glucose dehydrogenase YP_007229886.1 COG3659 Carbohydrate-selective porin YP_007229887.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_007229888.1 COG3342 Uncharacterized conserved protein YP_007229889.1 COG2072 Predicted flavoprotein involved in K+ transport YP_007229890.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_007229891.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007229892.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_007229893.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007229894.1 COG0033 Phosphoglucomutase YP_007229895.1 COG4291 Predicted membrane protein YP_007229897.1 COG3300 MHYT domain (predicted integral membrane sensor domain) YP_007229898.1 COG1538 Outer membrane protein YP_007229899.1 COG0841 Cation/multidrug efflux pump YP_007229900.1 COG0841 Cation/multidrug efflux pump YP_007229901.1 COG0845 Membrane-fusion protein YP_007229902.1 COG2077 Peroxiredoxin YP_007229903.1 COG0814 Amino acid permeases YP_007229904.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_007229905.1 COG2055 Malate/L-lactate dehydrogenases YP_007229906.1 COG1737 Transcriptional regulators YP_007229907.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007229908.1 COG4215 ABC-type arginine transport system, permease component YP_007229909.1 COG4160 ABC-type arginine/histidine transport system, permease component YP_007229910.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007229911.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_007229912.1 COG2071 Predicted glutamine amidotransferases YP_007229913.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_007229914.1 COG0477 Permeases of the major facilitator superfamily YP_007229915.1 COG2721 Altronate dehydratase YP_007229916.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007229917.1 COG2186 Transcriptional regulators YP_007229920.1 COG0583 Transcriptional regulator YP_007229921.1 COG3238 Uncharacterized protein conserved in bacteria YP_007229922.1 COG4335 DNA alkylation repair enzyme YP_007229924.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007229926.1 COG0500 SAM-dependent methyltransferases YP_007229927.1 COG1765 Predicted redox protein, regulator of disulfide bond formation YP_007229928.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_007229929.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_007229930.1 COG2010 Cytochrome c, mono- and diheme variants YP_007229931.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_007229932.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007229933.1 COG1280 Putative threonine efflux protein YP_007229934.1 COG3313 Predicted Fe-S protein YP_007229936.1 COG1292 Choline-glycine betaine transporter YP_007229937.1 COG3865 Uncharacterized protein conserved in bacteria YP_007229938.1 COG3103 SH3 domain protein YP_007229940.1 COG0583 Transcriptional regulator YP_007229941.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007229942.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_007229943.1 COG0583 Transcriptional regulator YP_007229944.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_007229945.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007229946.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_007229947.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_007229948.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_007229949.1 COG1960 Acyl-CoA dehydrogenases YP_007229950.1 COG2128 Uncharacterized conserved protein YP_007229951.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007229952.1 COG1457 Purine-cytosine permease and related proteins YP_007229953.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_007229954.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_007229956.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007229957.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007229958.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_007229959.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_007229960.1 COG1802 Transcriptional regulators YP_007229961.1 COG1051 ADP-ribose pyrophosphatase YP_007229962.1 COG2202 FOG: PAS/PAC domain YP_007229963.1 COG1280 Putative threonine efflux protein YP_007229964.1 COG1280 Putative threonine efflux protein YP_007229965.1 COG1522 Transcriptional regulators YP_007229966.1 COG1457 Purine-cytosine permease and related proteins YP_007229967.1 COG0004 Ammonia permease YP_007229968.1 COG0069 Glutamate synthase domain 2 YP_007229969.1 COG0070 Glutamate synthase domain 3 YP_007229970.1 COG0067 Glutamate synthase domain 1 YP_007229971.1 COG0174 Glutamine synthetase YP_007229972.1 COG1396 Predicted transcriptional regulators YP_007229973.1 COG1051 ADP-ribose pyrophosphatase YP_007229974.1 COG1335 Amidases related to nicotinamidase YP_007229975.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_007229976.1 COG0583 Transcriptional regulator YP_007229977.1 COG2855 Predicted membrane protein YP_007229978.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_007229979.1 COG2199 FOG: GGDEF domain YP_007229982.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007229983.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_007229984.1 COG0376 Catalase (peroxidase I) YP_007229985.1 COG0583 Transcriptional regulator YP_007229987.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007229988.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_007229989.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_007229990.1 COG5628 Predicted acetyltransferase YP_007229991.1 COG4829 Muconolactone delta-isomerase YP_007229992.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_007229993.1 COG0583 Transcriptional regulator YP_007229994.1 COG3048 D-serine dehydratase YP_007229995.1 COG2771 DNA-binding HTH domain-containing proteins YP_007229996.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_007229997.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007229998.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_007229999.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007230000.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_007230001.1 COG0787 Alanine racemase YP_007230002.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_007230003.1 COG1042 Acyl-CoA synthetase (NDP forming) YP_007230004.1 COG1960 Acyl-CoA dehydrogenases YP_007230005.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007230006.1 COG0833 Amino acid transporters YP_007230007.1 COG0642 Signal transduction histidine kinase YP_007230008.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007230009.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007230010.1 COG1309 Transcriptional regulator YP_007230011.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007230012.1 COG5621 Predicted secreted hydrolase YP_007230013.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_007230014.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_007230015.1 COG3520 Uncharacterized protein conserved in bacteria YP_007230016.1 COG3523 Uncharacterized protein conserved in bacteria YP_007230017.1 COG3209 Rhs family protein YP_007230022.1 COG3293 Transposase and inactivated derivatives YP_007230023.1 COG3293 Transposase and inactivated derivatives YP_007230024.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_007230027.1 COG0625 Glutathione S-transferase YP_007230029.1 COG2186 Transcriptional regulators YP_007230030.1 COG0277 FAD/FMN-containing dehydrogenases YP_007230031.1 COG0277 FAD/FMN-containing dehydrogenases YP_007230032.1 COG0247 Fe-S oxidoreductase YP_007230033.1 COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol YP_007230034.1 COG2225 Malate synthase YP_007230036.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007230037.1 COG2807 Cyanate permease YP_007230038.1 COG0590 Cytosine/adenosine deaminases YP_007230039.1 COG2128 Uncharacterized conserved protein YP_007230040.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007230041.1 COG0183 Acetyl-CoA acetyltransferase YP_007230042.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_007230043.1 COG1309 Transcriptional regulator YP_007230044.1 COG0784 FOG: CheY-like receiver YP_007230045.1 COG0642 Signal transduction histidine kinase YP_007230046.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_007230047.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_007230048.1 COG0642 Signal transduction histidine kinase YP_007230049.1 COG0784 FOG: CheY-like receiver YP_007230050.1 COG2243 Precorrin-2 methylase YP_007230053.1 COG0346 Lactoylglutathione lyase and related lyases YP_007230055.1 COG0169 Shikimate 5-dehydrogenase YP_007230058.1 COG4678 Muramidase (phage lambda lysozyme) YP_007230060.1 COG2932 Predicted transcriptional regulator YP_007230065.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_007230067.1 COG3486 Lysine/ornithine N-monooxygenase YP_007230068.1 COG3182 Uncharacterized iron-regulated membrane protein YP_007230072.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_007230073.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_007230074.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_007230075.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_007230077.1 COG1335 Amidases related to nicotinamidase YP_007230078.1 COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis YP_007230079.1 COG3251 Uncharacterized protein conserved in bacteria YP_007230080.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_007230081.1 COG0788 Formyltetrahydrofolate hydrolase YP_007230082.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_007230083.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007230084.1 COG4311 Sarcosine oxidase delta subunit YP_007230085.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_007230086.1 COG4583 Sarcosine oxidase gamma subunit YP_007230087.1 COG0583 Transcriptional regulator YP_007230088.1 COG0657 Esterase/lipase YP_007230089.1 COG1741 Pirin-related protein YP_007230090.1 COG5470 Uncharacterized conserved protein YP_007230091.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_007230092.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007230093.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_007230094.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_007230095.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_007230096.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_007230097.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_007230098.1 COG1960 Acyl-CoA dehydrogenases YP_007230099.1 COG0583 Transcriptional regulator YP_007230100.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_007230101.1 COG5654 Uncharacterized conserved protein YP_007230102.1 COG5642 Uncharacterized conserved protein YP_007230103.1 COG0778 Nitroreductase YP_007230104.1 COG0583 Transcriptional regulator YP_007230105.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007230106.1 COG1280 Putative threonine efflux protein YP_007230107.1 COG2814 Arabinose efflux permease YP_007230109.1 COG1064 Zn-dependent alcohol dehydrogenases YP_007230110.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007230111.1 COG1309 Transcriptional regulator YP_007230112.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_007230113.1 COG1514 2'-5' RNA ligase YP_007230114.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_007230115.1 COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases YP_007230116.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_007230117.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007230118.1 COG3633 Na+/serine symporter YP_007230119.1 COG3132 Uncharacterized protein conserved in bacteria YP_007230121.1 COG3634 Alkyl hydroperoxide reductase, large subunit YP_007230122.1 COG0450 Peroxiredoxin YP_007230123.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_007230124.1 COG1210 UDP-glucose pyrophosphorylase YP_007230125.1 COG3258 Cytochrome c YP_007230126.1 COG2863 Cytochrome c553 YP_007230130.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_007230131.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_007230132.1 COG4149 ABC-type molybdate transport system, permease component YP_007230133.1 COG4148 ABC-type molybdate transport system, ATPase component YP_007230134.1 COG3569 Topoisomerase IB YP_007230135.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_007230136.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007230137.1 COG0467 RecA-superfamily ATPases implicated in signal transduction YP_007230138.1 COG2202 FOG: PAS/PAC domain YP_007230140.1 COG2259 Predicted membrane protein YP_007230142.1 COG1064 Zn-dependent alcohol dehydrogenases YP_007230146.1 COG0583 Transcriptional regulator YP_007230147.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007230148.1 COG0259 Pyridoxamine-phosphate oxidase YP_007230160.1 COG0616 Periplasmic serine proteases (ClpP class) YP_007230161.1 COG0406 Fructose-2,6-bisphosphatase YP_007230162.1 COG3255 Putative sterol carrier protein YP_007230163.1 COG3173 Predicted aminoglycoside phosphotransferase YP_007230164.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007230165.1 COG0500 SAM-dependent methyltransferases YP_007230166.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_007230167.1 COG5455 Predicted integral membrane protein YP_007230170.1 COG0471 Di- and tricarboxylate transporters YP_007230171.1 COG2199 FOG: GGDEF domain YP_007230172.1 COG0730 Predicted permeases YP_007230173.1 COG0583 Transcriptional regulator YP_007230174.1 COG1335 Amidases related to nicotinamidase YP_007230179.1 COG5518 Bacteriophage capsid portal protein YP_007230185.1 COG5004 P2-like prophage tail protein X YP_007230187.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_007230191.1 COG4540 Phage P2 baseplate assembly protein gpV YP_007230192.1 COG3628 Phage baseplate assembly protein W YP_007230193.1 COG3948 Phage-related baseplate assembly protein YP_007230194.1 COG4385 Bacteriophage P2-related tail formation protein YP_007230195.1 COG5301 Phage-related tail fibre protein YP_007230197.1 COG3497 Phage tail sheath protein FI YP_007230198.1 COG3498 Phage tail tube protein FII YP_007230202.1 COG3499 Phage protein U YP_007230203.1 COG3500 Phage protein D YP_007230205.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_007230206.1 COG1396 Predicted transcriptional regulators YP_007230213.1 COG0125 Thymidylate kinase YP_007230215.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_007230217.1 COG0270 Site-specific DNA methylase YP_007230218.1 COG0582 Integrase YP_007230219.1 COG0670 Integral membrane protein, interacts with FtsH YP_007230220.1 COG2233 Xanthine/uracil permeases YP_007230221.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction YP_007230222.1 COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur YP_007230223.1 COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur YP_007230224.1 COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit YP_007230225.1 COG0547 Anthranilate phosphoribosyltransferase YP_007230226.1 COG0435 Predicted glutathione S-transferase YP_007230227.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_007230228.1 COG0172 Seryl-tRNA synthetase YP_007230229.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_007230230.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_007230231.1 COG2834 Outer membrane lipoprotein-sorting protein YP_007230232.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_007230233.1 COG2360 Leu/Phe-tRNA-protein transferase YP_007230234.1 COG2935 Putative arginyl-tRNA:protein arginylyltransferase YP_007230235.1 COG0361 Translation initiation factor 1 (IF-1) YP_007230236.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_007230237.1 COG2127 Uncharacterized conserved protein YP_007230238.1 COG1278 Cold shock proteins YP_007230239.1 COG0538 Isocitrate dehydrogenases YP_007230240.1 COG2838 Monomeric isocitrate dehydrogenase YP_007230241.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007230242.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_007230243.1 COG2915 Uncharacterized protein involved in purine metabolism YP_007230244.1 COG0015 Adenylosuccinate lyase YP_007230245.1 COG2850 Uncharacterized conserved protein YP_007230246.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007230247.1 COG0550 Topoisomerase IA YP_007230248.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007230249.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007230250.1 COG3209 Rhs family protein YP_007230251.1 COG0730 Predicted permeases YP_007230252.1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding YP_007230253.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007230254.1 COG3067 Na+/H+ antiporter YP_007230255.1 COG0262 Dihydrofolate reductase YP_007230256.1 COG3040 Bacterial lipocalin YP_007230257.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007230258.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_007230259.1 COG0563 Adenylate kinase and related kinases YP_007230260.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_007230261.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_007230262.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_007230263.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_007230264.1 COG0167 Dihydroorotate dehydrogenase YP_007230265.1 COG1309 Transcriptional regulator YP_007230266.1 COG3387 Glucoamylase and related glycosyl hydrolases YP_007230267.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_007230268.1 COG1023 Predicted 6-phosphogluconate dehydrogenase YP_007230270.1 COG0297 Glycogen synthase YP_007230271.1 COG0296 1,4-alpha-glucan branching enzyme YP_007230272.1 COG1640 4-alpha-glucanotransferase YP_007230273.1 COG3280 Maltooligosyl trehalose synthase YP_007230275.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_007230276.1 COG3568 Metal-dependent hydrolase YP_007230277.1 COG3468 Type V secretory pathway, adhesin AidA YP_007230278.1 COG0296 1,4-alpha-glucan branching enzyme YP_007230279.1 COG0366 Glycosidases YP_007230280.1 COG0366 Glycosidases YP_007230282.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_007230283.1 COG1960 Acyl-CoA dehydrogenases YP_007230284.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_007230285.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007230286.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_007230287.1 COG1476 Predicted transcriptional regulators YP_007230288.1 COG1396 Predicted transcriptional regulators YP_007230290.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007230291.1 COG0477 Permeases of the major facilitator superfamily YP_007230292.1 COG0583 Transcriptional regulator YP_007230293.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007230294.1 COG0477 Permeases of the major facilitator superfamily YP_007230295.1 COG3959 Transketolase, N-terminal subunit YP_007230296.1 COG3958 Transketolase, C-terminal subunit YP_007230297.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_007230298.1 COG0765 ABC-type amino acid transport system, permease component YP_007230299.1 COG0765 ABC-type amino acid transport system, permease component YP_007230300.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007230301.1 COG2186 Transcriptional regulators YP_007230303.1 COG2199 FOG: GGDEF domain YP_007230304.1 COG2202 FOG: PAS/PAC domain YP_007230305.1 COG3523 Uncharacterized protein conserved in bacteria YP_007230306.1 COG3515 Uncharacterized protein conserved in bacteria YP_007230308.1 COG3516 Uncharacterized protein conserved in bacteria YP_007230309.1 COG3517 Uncharacterized protein conserved in bacteria YP_007230310.1 COG3522 Uncharacterized protein conserved in bacteria YP_007230311.1 COG3455 Uncharacterized protein conserved in bacteria YP_007230314.1 COG3209 Rhs family protein YP_007230316.1 COG0558 Phosphatidylglycerophosphate synthase YP_007230317.1 COG0322 Nuclease subunit of the excinuclease complex YP_007230318.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007230319.1 COG1396 Predicted transcriptional regulators YP_007230320.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007230321.1 COG3189 Uncharacterized conserved protein YP_007230322.1 COG0306 Phosphate/sulphate permeases YP_007230323.1 COG0625 Glutathione S-transferase YP_007230324.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_007230325.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007230326.1 COG0583 Transcriptional regulator YP_007230327.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_007230330.1 COG0480 Translation elongation factors (GTPases) YP_007230331.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_007230332.1 COG1450 Type II secretory pathway, component PulD YP_007230333.1 COG2224 Isocitrate lyase YP_007230336.1 COG3714 Predicted membrane protein YP_007230337.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_007230338.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_007230339.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_007230340.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_007230341.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_007230342.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_007230343.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_007230344.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_007230345.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_007230346.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_007230347.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_007230348.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_007230349.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_007230354.1 COG2771 DNA-binding HTH domain-containing proteins YP_007230355.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007230356.1 COG0431 Predicted flavoprotein YP_007230358.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_007230359.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_007230360.1 COG0328 Ribonuclease HI YP_007230361.1 COG0500 SAM-dependent methyltransferases YP_007230362.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_007230363.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_007230364.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_007230365.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_007230366.1 COG4174 ABC-type uncharacterized transport system, permease component YP_007230367.1 COG4239 ABC-type uncharacterized transport system, permease component YP_007230368.1 COG4172 ABC-type uncharacterized transport system, duplicated ATPase component YP_007230373.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_007230374.1 COG0583 Transcriptional regulator YP_007230377.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007230378.1 COG2205 Osmosensitive K+ channel histidine kinase YP_007230379.1 COG2156 K+-transporting ATPase, c chain YP_007230380.1 COG2216 High-affinity K+ transport system, ATPase chain B YP_007230381.1 COG2060 K+-transporting ATPase, A chain YP_007230383.1 COG0628 Predicted permease YP_007230385.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007230386.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007230387.1 COG2062 Phosphohistidine phosphatase SixA YP_007230389.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_007230390.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007230391.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_007230392.1 COG0642 Signal transduction histidine kinase YP_007230393.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_007230394.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_007230396.1 COG1741 Pirin-related protein YP_007230397.1 COG0412 Dienelactone hydrolase and related enzymes YP_007230398.1 COG0326 Molecular chaperone, HSP90 family YP_007230399.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_007230400.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_007230402.1 COG3821 Predicted membrane protein YP_007230403.1 COG1114 Branched-chain amino acid permeases YP_007230404.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_007230405.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_007230406.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_007230407.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_007230408.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_007230409.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_007230410.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_007230411.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_007230412.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_007230413.1 COG0372 Citrate synthase YP_007230416.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007230417.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007230419.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007230420.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_007230421.1 COG2086 Electron transfer flavoprotein, beta subunit YP_007230422.1 COG0644 Dehydrogenases (flavoproteins) YP_007230423.1 COG0477 Permeases of the major facilitator superfamily YP_007230424.1 COG0784 FOG: CheY-like receiver YP_007230425.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007230426.1 COG0845 Membrane-fusion protein YP_007230427.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_007230428.1 COG1538 Outer membrane protein YP_007230430.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_007230431.1 COG0520 Selenocysteine lyase YP_007230432.1 COG0657 Esterase/lipase YP_007230433.1 COG3255 Putative sterol carrier protein YP_007230434.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_007230435.1 COG0642 Signal transduction histidine kinase YP_007230436.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007230438.1 COG5620 Uncharacterized conserved protein YP_007230439.1 COG5620 Uncharacterized conserved protein YP_007230440.1 COG2068 Uncharacterized MobA-related protein YP_007230441.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_007230442.1 COG2010 Cytochrome c, mono- and diheme variants YP_007230443.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_007230444.1 COG1070 Sugar (pentulose and hexulose) kinases YP_007230445.1 COG4232 Thiol:disulfide interchange protein YP_007230446.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_007230447.1 COG1651 Protein-disulfide isomerase YP_007230449.1 COG1131 ABC-type multidrug transport system, ATPase component YP_007230450.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_007230451.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007230452.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_007230453.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007230454.1 COG5018 Inhibitor of the KinA pathway to sporulation, predicted exonuclease YP_007230455.1 COG3123 Uncharacterized protein conserved in bacteria YP_007230456.1 COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold YP_007230457.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_007230458.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_007230459.1 COG4736 Cbb3-type cytochrome oxidase, subunit 3 YP_007230460.1 COG2010 Cytochrome c, mono- and diheme variants YP_007230461.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_007230462.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_007230463.1 COG4736 Cbb3-type cytochrome oxidase, subunit 3 YP_007230464.1 COG2010 Cytochrome c, mono- and diheme variants YP_007230465.1 COG0348 Polyferredoxin YP_007230466.1 COG3198 Uncharacterized protein conserved in bacteria YP_007230467.1 COG2217 Cation transport ATPase YP_007230468.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_007230469.1 COG2836 Uncharacterized conserved protein YP_007230470.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_007230471.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_007230472.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_007230473.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_007230474.1 COG0718 Uncharacterized protein conserved in bacteria YP_007230475.1 COG2812 DNA polymerase III, gamma/tau subunits YP_007230476.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007230479.1 COG0789 Predicted transcriptional regulators YP_007230482.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_007230483.1 COG3115 Cell division protein YP_007230484.1 COG1196 Chromosome segregation ATPases YP_007230485.1 COG1802 Transcriptional regulators YP_007230486.1 COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A YP_007230487.1 COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B YP_007230488.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_007230489.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_007230490.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_007230491.1 COG1802 Transcriptional regulators YP_007230492.1 COG2252 Permeases YP_007230493.1 COG3209 Rhs family protein YP_007230494.1 COG2351 Transthyretin-like protein YP_007230495.1 COG0726 Predicted xylanase/chitin deacetylase YP_007230496.1 COG3195 Uncharacterized protein conserved in bacteria YP_007230497.1 COG3194 Ureidoglycolate hydrolase YP_007230498.1 COG3748 Predicted membrane protein YP_007230499.1 COG2233 Xanthine/uracil permeases YP_007230500.1 COG3248 Nucleoside-binding outer membrane protein YP_007230501.1 COG3248 Nucleoside-binding outer membrane protein YP_007230502.1 COG2354 Uncharacterized protein conserved in bacteria YP_007230503.1 COG1309 Transcriptional regulator YP_007230504.1 COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol YP_007230505.1 COG3960 Glyoxylate carboligase YP_007230506.1 COG3622 Hydroxypyruvate isomerase YP_007230507.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_007230508.1 COG2379 Putative glycerate kinase YP_007230509.1 COG0469 Pyruvate kinase YP_007230510.1 COG4413 Urea transporter YP_007230511.1 COG3209 Rhs family protein YP_007230512.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_007230513.1 COG1613 ABC-type sulfate transport system, periplasmic component YP_007230514.1 COG1092 Predicted SAM-dependent methyltransferases YP_007230515.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007230516.1 COG1522 Transcriptional regulators YP_007230517.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_007230518.1 COG4126 Hydantoin racemase YP_007230521.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_007230522.1 COG3791 Uncharacterized conserved protein YP_007230523.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_007230524.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_007230526.1 COG4235 Cytochrome c biogenesis factor YP_007230527.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes YP_007230528.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_007230529.1 COG1138 Cytochrome c biogenesis factor YP_007230530.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_007230531.1 COG3114 Heme exporter protein D YP_007230532.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_007230533.1 COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_007230534.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_007230536.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_007230537.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007230538.1 COG1073 Hydrolases of the alpha/beta superfamily YP_007230540.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_007230541.1 COG0477 Permeases of the major facilitator superfamily YP_007230543.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007230545.1 COG3774 Mannosyltransferase OCH1 and related enzymes YP_007230547.1 COG0835 Chemotaxis signal transduction protein YP_007230548.1 COG0835 Chemotaxis signal transduction protein YP_007230549.1 COG1192 ATPases involved in chromosome partitioning YP_007230550.1 COG1360 Flagellar motor protein YP_007230551.1 COG1291 Flagellar motor component YP_007230552.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_007230553.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_007230554.1 COG3143 Chemotaxis protein YP_007230555.1 COG0784 FOG: CheY-like receiver YP_007230556.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_007230557.1 COG0455 ATPases involved in chromosome partitioning YP_007230558.1 COG1419 Flagellar GTP-binding protein YP_007230559.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_007230560.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_007230561.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_007230562.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_007230563.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_007230564.1 COG3190 Flagellar biogenesis protein YP_007230565.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_007230566.1 COG1868 Flagellar motor switch protein YP_007230567.1 COG1580 Flagellar basal body-associated protein YP_007230568.1 COG3144 Flagellar hook-length control protein YP_007230569.1 COG2198 FOG: HPt domain YP_007230570.1 COG0784 FOG: CheY-like receiver YP_007230571.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_007230572.1 COG2882 Flagellar biosynthesis chaperone YP_007230573.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_007230574.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_007230575.1 COG1536 Flagellar motor switch protein YP_007230576.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_007230577.1 COG1677 Flagellar hook-basal body protein YP_007230578.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007230579.1 COG0642 Signal transduction histidine kinase YP_007230580.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007230582.1 COG1516 Flagellin-specific chaperone FliS YP_007230583.1 COG1345 Flagellar capping protein YP_007230584.1 COG1334 Uncharacterized flagellar protein FlaG YP_007230585.1 COG1344 Flagellin and related hook-associated proteins YP_007230586.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_007230587.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_007230588.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_007230589.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007230591.1 COG0500 SAM-dependent methyltransferases YP_007230593.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_007230594.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_007230595.1 COG1344 Flagellin and related hook-associated proteins YP_007230596.1 COG1256 Flagellar hook-associated protein YP_007230597.1 COG3951 Rod binding protein YP_007230598.1 COG1706 Flagellar basal-body P-ring protein YP_007230599.1 COG2063 Flagellar basal body L-ring protein YP_007230600.1 COG4786 Flagellar basal body rod protein YP_007230601.1 COG4787 Flagellar basal body rod protein YP_007230603.1 COG1749 Flagellar hook protein FlgE YP_007230604.1 COG1843 Flagellar hook capping protein YP_007230605.1 COG1558 Flagellar basal body rod protein YP_007230606.1 COG1815 Flagellar basal body protein YP_007230607.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_007230608.1 COG0835 Chemotaxis signal transduction protein YP_007230609.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_007230610.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_007230611.1 COG3418 Flagellar biosynthesis/type III secretory pathway chaperone YP_007230612.1 COG5581 Predicted glycosyltransferase YP_007230614.1 COG0477 Permeases of the major facilitator superfamily YP_007230616.1 COG1522 Transcriptional regulators YP_007230617.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_007230618.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_007230619.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_007230620.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_007230621.1 COG2202 FOG: PAS/PAC domain YP_007230622.1 COG0583 Transcriptional regulator YP_007230623.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_007230624.1 COG4392 Predicted membrane protein YP_007230625.1 COG3709 Uncharacterized component of phosphonate metabolism YP_007230627.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_007230628.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_007230629.1 COG0527 Aspartokinases YP_007230630.1 COG0013 Alanyl-tRNA synthetase YP_007230632.1 COG2988 Succinylglutamate desuccinylase YP_007230634.1 COG3724 Succinylarginine dihydrolase YP_007230635.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007230636.1 COG3138 Arginine/ornithine N-succinyltransferase beta subunit YP_007230637.1 COG3138 Arginine/ornithine N-succinyltransferase beta subunit YP_007230638.1 COG4992 Ornithine/acetylornithine aminotransferase YP_007230639.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007230640.1 COG4598 ABC-type histidine transport system, ATPase component YP_007230641.1 COG4160 ABC-type arginine/histidine transport system, permease component YP_007230642.1 COG4215 ABC-type arginine transport system, permease component YP_007230643.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007230644.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_007230646.1 COG3283 Transcriptional regulator of aromatic amino acids metabolism YP_007230647.1 COG3186 Phenylalanine-4-hydroxylase YP_007230648.1 COG2154 Pterin-4a-carbinolamine dehydratase YP_007230650.1 COG0477 Permeases of the major facilitator superfamily YP_007230651.1 COG0277 FAD/FMN-containing dehydrogenases YP_007230652.1 COG0583 Transcriptional regulator YP_007230653.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007230654.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_007230655.1 COG1386 Predicted transcriptional regulator containing the HTH domain YP_007230656.1 COG1354 Uncharacterized conserved protein YP_007230657.1 COG0009 Putative translation factor (SUA5) YP_007230658.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_007230659.1 COG2917 Intracellular septation protein A YP_007230660.1 COG2350 Uncharacterized protein conserved in bacteria YP_007230661.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007230662.1 COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein YP_007230663.1 COG0642 Signal transduction histidine kinase YP_007230664.1 COG0778 Nitroreductase YP_007230665.1 COG0168 Trk-type K+ transport systems, membrane components YP_007230666.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007230667.1 COG4323 Predicted membrane protein YP_007230668.1 COG2908 Uncharacterized protein conserved in bacteria YP_007230669.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007230670.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007230671.1 COG3526 Uncharacterized protein conserved in bacteria YP_007230672.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_007230673.1 COG1846 Transcriptional regulators YP_007230674.1 COG0514 Superfamily II DNA helicase YP_007230675.1 COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA YP_007230676.1 COG2832 Uncharacterized protein conserved in bacteria YP_007230677.1 COG1538 Outer membrane protein YP_007230678.1 COG3148 Uncharacterized conserved protein YP_007230679.1 COG2202 FOG: PAS/PAC domain YP_007230680.1 COG0583 Transcriptional regulator YP_007230681.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_007230682.1 COG0591 Na+/proline symporter YP_007230683.1 COG0583 Transcriptional regulator YP_007230684.1 COG0477 Permeases of the major facilitator superfamily YP_007230685.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007230686.1 COG1846 Transcriptional regulators YP_007230688.1 COG0513 Superfamily II DNA and RNA helicases YP_007230689.1 COG0668 Small-conductance mechanosensitive channel YP_007230690.1 COG1457 Purine-cytosine permease and related proteins YP_007230691.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007230692.1 COG1182 Acyl carrier protein phosphodiesterase YP_007230694.1 COG0583 Transcriptional regulator YP_007230695.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007230696.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_007230697.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_007230698.1 COG3146 Uncharacterized protein conserved in bacteria YP_007230700.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_007230701.1 COG1643 HrpA-like helicases YP_007230702.1 COG0174 Glutamine synthetase YP_007230703.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007230704.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_007230705.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_007230706.1 COG2267 Lysophospholipase YP_007230707.1 COG2030 Acyl dehydratase YP_007230708.1 COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain YP_007230709.1 COG3832 Uncharacterized conserved protein YP_007230710.1 COG3795 Uncharacterized protein conserved in bacteria YP_007230711.1 COG4319 Ketosteroid isomerase homolog YP_007230712.1 COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters YP_007230713.1 COG0583 Transcriptional regulator YP_007230715.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007230716.1 COG0242 N-formylmethionyl-tRNA deformylase YP_007230717.1 COG1295 Predicted membrane protein YP_007230718.1 COG3237 Uncharacterized protein conserved in bacteria YP_007230720.1 COG2996 Uncharacterized protein conserved in bacteria YP_007230722.1 COG4579 Isocitrate dehydrogenase kinase/phosphatase YP_007230723.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007230725.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007230726.1 COG1262 Uncharacterized conserved protein YP_007230727.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007230728.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_007230729.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_007230730.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_007230731.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_007230732.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_007230737.1 COG3241 Azurin YP_007230738.1 COG4615 ABC-type siderophore export system, fused ATPase and permease components YP_007230739.1 COG1672 Predicted ATPase (AAA+ superfamily) YP_007230740.1 COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases YP_007230741.1 COG0031 Cysteine synthase YP_007230743.1 COG0714 MoxR-like ATPases YP_007230744.1 COG3825 Uncharacterized protein conserved in bacteria YP_007230745.1 COG1984 Allophanate hydrolase subunit 2 YP_007230746.1 COG2049 Allophanate hydrolase subunit 1 YP_007230747.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_007230748.1 COG0477 Permeases of the major facilitator superfamily YP_007230749.1 COG0583 Transcriptional regulator YP_007230751.1 COG0121 Predicted glutamine amidotransferase YP_007230753.1 COG1770 Protease II YP_007230755.1 COG1403 Restriction endonuclease YP_007230756.1 COG0219 Predicted rRNA methylase (SpoU class) YP_007230759.1 COG2983 Uncharacterized conserved protein YP_007230760.1 COG0778 Nitroreductase YP_007230761.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_007230762.1 COG3100 Uncharacterized protein conserved in bacteria YP_007230763.1 COG0349 Ribonuclease D YP_007230764.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_007230765.1 COG3232 5-carboxymethyl-2-hydroxymuconate isomerase YP_007230767.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_007230768.1 COG1522 Transcriptional regulators YP_007230769.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_007230770.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_007230771.1 COG3781 Predicted membrane protein YP_007230772.1 COG0521 Molybdopterin biosynthesis enzymes YP_007230773.1 COG0583 Transcriptional regulator YP_007230774.1 COG2202 FOG: PAS/PAC domain YP_007230775.1 COG0531 Amino acid transporters YP_007230776.1 COG3938 Proline racemase YP_007230777.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_007230778.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007230779.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007230780.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_007230781.1 COG0640 Predicted transcriptional regulators YP_007230782.1 COG2345 Predicted transcriptional regulator YP_007230784.1 COG0579 Predicted dehydrogenase YP_007230785.1 COG3938 Proline racemase YP_007230787.1 COG0168 Trk-type K+ transport systems, membrane components YP_007230788.1 COG3004 Na+/H+ antiporter YP_007230789.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007230795.1 COG4678 Muramidase (phage lambda lysozyme) YP_007230797.1 COG1403 Restriction endonuclease YP_007230801.1 COG3646 Uncharacterized phage-encoded protein YP_007230806.1 COG4197 Uncharacterized protein conserved in bacteria, prophage-related YP_007230807.1 COG2932 Predicted transcriptional regulator YP_007230811.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_007230813.1 COG0088 Ribosomal protein L4 YP_007230815.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_007230816.1 COG0582 Integrase YP_007230819.1 COG0616 Periplasmic serine proteases (ClpP class) YP_007230826.1 COG4733 Phage-related protein, tail component YP_007230830.1 COG5281 Phage-related minor tail protein YP_007230836.1 COG5614 Bacteriophage head-tail adaptor YP_007230839.1 COG4653 Predicted phage phi-C31 gp36 major capsid-like protein YP_007230840.1 COG3740 Phage head maturation protease YP_007230841.1 COG4695 Phage-related protein YP_007230842.1 COG4626 Phage terminase-like protein, large subunit YP_007230843.1 COG3728 Phage terminase, small subunit YP_007230844.1 COG1403 Restriction endonuclease YP_007230845.1 COG1403 Restriction endonuclease YP_007230854.1 COG0305 Replicative DNA helicase YP_007230855.1 COG1484 DNA replication protein YP_007230865.1 COG2932 Predicted transcriptional regulator YP_007230866.1 COG2771 DNA-binding HTH domain-containing proteins YP_007230867.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_007230870.1 COG0260 Leucyl aminopeptidase YP_007230872.1 COG0582 Integrase YP_007230873.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_007230874.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_007230875.1 COG3317 Uncharacterized lipoprotein YP_007230876.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_007230877.1 COG2716 Glycine cleavage system regulatory protein YP_007230878.1 COG1225 Peroxiredoxin YP_007230879.1 COG0628 Predicted permease YP_007230880.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_007230881.1 COG4783 Putative Zn-dependent protease, contains TPR repeats YP_007230882.1 COG0379 Quinolinate synthase YP_007230883.1 COG5339 Uncharacterized protein conserved in bacteria YP_007230884.1 COG0531 Amino acid transporters YP_007230885.1 COG0840 Methyl-accepting chemotaxis protein YP_007230886.1 COG3965 Predicted Co/Zn/Cd cation transporters YP_007230887.1 COG0603 Predicted PP-loop superfamily ATPase YP_007230888.1 COG0602 Organic radical activating enzymes YP_007230889.1 COG1729 Uncharacterized protein conserved in bacteria YP_007230890.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007230891.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_007230893.1 COG0848 Biopolymer transport protein YP_007230894.1 COG0811 Biopolymer transport proteins YP_007230895.1 COG0824 Predicted thioesterase YP_007230896.1 COG2255 Holliday junction resolvasome, helicase subunit YP_007230897.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_007230898.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_007230899.1 COG0217 Uncharacterized conserved protein YP_007230900.1 COG0173 Aspartyl-tRNA synthetase YP_007230901.1 COG2331 Uncharacterized protein conserved in bacteria YP_007230902.1 COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis YP_007230903.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_007230904.1 COG1278 Cold shock proteins YP_007230905.1 COG2900 Uncharacterized protein conserved in bacteria YP_007230906.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_007230908.1 COG0442 Prolyl-tRNA synthetase YP_007230909.1 COG0642 Signal transduction histidine kinase YP_007230910.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_007230911.1 COG0392 Predicted integral membrane protein YP_007230912.1 COG3946 Type IV secretory pathway, VirJ component YP_007230913.1 COG3158 K+ transporter YP_007230914.1 COG0621 2-methylthioadenine synthetase YP_007230919.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007230920.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_007230921.1 COG4807 Uncharacterized protein conserved in bacteria YP_007230922.1 COG1720 Uncharacterized conserved protein YP_007230923.1 COG1301 Na+/H+-dicarboxylate symporters YP_007230924.1 COG0642 Signal transduction histidine kinase YP_007230925.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007230927.1 COG0412 Dienelactone hydrolase and related enzymes YP_007230928.1 COG2977 Phosphopantetheinyl transferase component of siderophore synthetase YP_007230929.1 COG0642 Signal transduction histidine kinase YP_007230930.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007230931.1 COG0209 Ribonucleotide reductase, alpha subunit YP_007230932.1 COG0208 Ribonucleotide reductase, beta subunit YP_007230933.1 COG3617 Prophage antirepressor YP_007230937.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_007230938.1 COG0583 Transcriptional regulator YP_007230939.1 COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase YP_007230940.1 COG0625 Glutathione S-transferase YP_007230941.1 COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA YP_007230942.1 COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA YP_007230943.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_007230945.1 COG0388 Predicted amidohydrolase YP_007230946.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_007230947.1 COG2116 Formate/nitrite family of transporters YP_007230948.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_007230949.1 COG2199 FOG: GGDEF domain YP_007230950.1 COG2199 FOG: GGDEF domain YP_007230952.1 COG0583 Transcriptional regulator YP_007230953.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007230954.1 COG1566 Multidrug resistance efflux pump YP_007230956.1 COG1289 Predicted membrane protein YP_007230961.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_007230962.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_007230963.1 COG5626 Uncharacterized conserved small protein YP_007230964.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_007230965.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_007230966.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_007230967.1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component YP_007230968.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_007230969.1 COG3650 Predicted membrane protein YP_007230970.1 COG2509 Uncharacterized FAD-dependent dehydrogenases YP_007230971.1 COG3004 Na+/H+ antiporter YP_007230972.1 COG3133 Outer membrane lipoprotein YP_007230974.1 COG0259 Pyridoxamine-phosphate oxidase YP_007230975.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007230976.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_007230978.1 COG1199 Rad3-related DNA helicases YP_007230979.1 COG5615 Predicted integral membrane protein YP_007230981.1 COG3776 Predicted membrane protein YP_007230982.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007230983.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007230985.1 COG3012 Uncharacterized protein conserved in bacteria YP_007230986.1 COG5608 Conserved secreted protein YP_007230987.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_007230988.1 COG0477 Permeases of the major facilitator superfamily YP_007230989.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007230990.1 COG2366 Protein related to penicillin acylase YP_007230992.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_007230993.1 COG1793 ATP-dependent DNA ligase YP_007230994.1 COG3608 Predicted deacylase YP_007230995.1 COG1201 Lhr-like helicases YP_007230996.1 COG1407 Predicted ICC-like phosphoesterases YP_007230998.1 COG0717 Deoxycytidine deaminase YP_007230999.1 COG1278 Cold shock proteins YP_007231000.1 COG0489 ATPases involved in chromosome partitioning YP_007231001.1 COG0143 Methionyl-tRNA synthetase YP_007231002.1 COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA YP_007231003.1 COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD YP_007231004.1 COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG YP_007231006.1 COG0177 Predicted EndoIII-related endonuclease YP_007231008.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_007231010.1 COG0137 Argininosuccinate synthase YP_007231011.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007231012.1 COG0418 Dihydroorotase YP_007231013.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_007231014.1 COG0450 Peroxiredoxin YP_007231016.1 COG2906 Bacterioferritin-associated ferredoxin YP_007231017.1 COG2193 Bacterioferritin (cytochrome b1) YP_007231018.1 COG0278 Glutaredoxin-related protein YP_007231019.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_007231020.1 COG0078 Ornithine carbamoyltransferase YP_007231021.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_007231022.1 COG2606 Uncharacterized conserved protein YP_007231023.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_007231024.1 COG0554 Glycerol kinase YP_007231025.1 COG1349 Transcriptional regulators of sugar metabolism YP_007231026.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_007231027.1 COG4886 Leucine-rich repeat (LRR) protein YP_007231028.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007231029.1 COG0765 ABC-type amino acid transport system, permease component YP_007231030.1 COG0765 ABC-type amino acid transport system, permease component YP_007231031.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_007231032.1 COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system YP_007231033.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007231034.1 COG3136 Uncharacterized membrane protein required for alginate biosynthesis YP_007231035.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007231036.1 COG0583 Transcriptional regulator YP_007231037.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007231038.1 COG1201 Lhr-like helicases YP_007231039.1 COG0069 Glutamate synthase domain 2 YP_007231040.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007231041.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_007231042.1 COG1695 Predicted transcriptional regulators YP_007231043.1 COG2375 Siderophore-interacting protein YP_007231045.1 COG4628 Uncharacterized conserved protein YP_007231046.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007231047.1 COG3659 Carbohydrate-selective porin YP_007231048.1 COG4993 Glucose dehydrogenase YP_007231049.1 COG0466 ATP-dependent Lon protease, bacterial type YP_007231050.1 COG5513 Predicted secreted protein YP_007231051.1 COG0500 SAM-dependent methyltransferases YP_007231052.1 COG0500 SAM-dependent methyltransferases YP_007231054.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007231055.1 COG0642 Signal transduction histidine kinase YP_007231056.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_007231057.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_007231058.1 COG1159 GTPase YP_007231059.1 COG0571 dsRNA-specific ribonuclease YP_007231060.1 COG0681 Signal peptidase I YP_007231061.1 COG0481 Membrane GTPase LepA YP_007231063.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_007231064.1 COG3026 Negative regulator of sigma E activity YP_007231065.1 COG3073 Negative regulator of sigma E activity YP_007231066.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007231067.1 COG0029 Aspartate oxidase YP_007231069.1 COG2938 Uncharacterized conserved protein YP_007231070.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_007231071.1 COG1639 Predicted signal transduction protein YP_007231072.1 COG0642 Signal transduction histidine kinase YP_007231073.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007231075.1 COG3181 Uncharacterized protein conserved in bacteria YP_007231077.1 COG3333 Uncharacterized protein conserved in bacteria YP_007231078.1 COG3180 Putative ammonia monooxygenase YP_007231079.1 COG0692 Uracil DNA glycosylase YP_007231080.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_007231083.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_007231084.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007231085.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_007231087.1 COG0457 FOG: TPR repeat YP_007231088.1 COG2064 Flp pilus assembly protein TadC YP_007231089.1 COG4965 Flp pilus assembly protein TadB YP_007231090.1 COG4962 Flp pilus assembly protein, ATPase CpaF YP_007231091.1 COG0784 FOG: CheY-like receiver YP_007231093.1 COG4961 Flp pilus assembly protein TadG YP_007231096.1 COG4964 Flp pilus assembly protein, secretin CpaC YP_007231097.1 COG3745 Flp pilus assembly protein CpaB YP_007231098.1 COG0606 Predicted ATPase with chaperone activity YP_007231099.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_007231101.1 COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_007231103.1 COG0500 SAM-dependent methyltransferases YP_007231104.1 COG3762 Predicted membrane protein YP_007231105.1 COG1472 Beta-glucosidase-related glycosidases YP_007231106.1 COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system YP_007231107.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007231108.1 COG0477 Permeases of the major facilitator superfamily YP_007231109.1 COG4705 Uncharacterized membrane-anchored protein conserved in bacteria YP_007231111.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_007231113.1 COG1359 Uncharacterized conserved protein YP_007231114.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007231115.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_007231116.1 COG0583 Transcriptional regulator YP_007231117.1 COG2910 Putative NADH-flavin reductase YP_007231118.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_007231119.1 COG0583 Transcriptional regulator YP_007231120.1 COG2513 PEP phosphonomutase and related enzymes YP_007231121.1 COG0477 Permeases of the major facilitator superfamily YP_007231122.1 COG1309 Transcriptional regulator YP_007231123.1 COG0845 Membrane-fusion protein YP_007231124.1 COG0841 Cation/multidrug efflux pump YP_007231125.1 COG1538 Outer membrane protein YP_007231127.1 COG0583 Transcriptional regulator YP_007231128.1 COG4539 Predicted membrane protein YP_007231129.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_007231130.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007231131.1 COG0015 Adenylosuccinate lyase YP_007231132.1 COG0477 Permeases of the major facilitator superfamily YP_007231133.1 COG0183 Acetyl-CoA acetyltransferase YP_007231134.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_007231135.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_007231136.1 COG0477 Permeases of the major facilitator superfamily YP_007231137.1 COG1414 Transcriptional regulator YP_007231139.1 COG0306 Phosphate/sulphate permeases YP_007231140.1 COG0433 Predicted ATPase YP_007231141.1 COG0840 Methyl-accepting chemotaxis protein YP_007231142.1 COG0438 Glycosyltransferase YP_007231143.1 COG3233 Predicted deacetylase YP_007231144.1 COG0392 Predicted integral membrane protein YP_007231145.1 COG0788 Formyltetrahydrofolate hydrolase YP_007231147.1 COG2925 Exonuclease I YP_007231149.1 COG1729 Uncharacterized protein conserved in bacteria YP_007231150.1 COG0469 Pyruvate kinase YP_007231151.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_007231152.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain YP_007231153.1 COG0388 Predicted amidohydrolase YP_007231154.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007231156.1 COG0693 Putative intracellular protease/amidase YP_007231157.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_007231160.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_007231161.1 COG1960 Acyl-CoA dehydrogenases YP_007231162.1 COG3176 Putative hemolysin YP_007231163.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_007231164.1 COG3124 Uncharacterized protein conserved in bacteria YP_007231165.1 COG0640 Predicted transcriptional regulators YP_007231166.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_007231168.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_007231169.1 COG0583 Transcriptional regulator YP_007231170.1 COG1279 Lysine efflux permease YP_007231171.1 COG0605 Superoxide dismutase YP_007231172.1 COG3622 Hydroxypyruvate isomerase YP_007231173.1 COG1802 Transcriptional regulators YP_007231174.1 COG4993 Glucose dehydrogenase YP_007231176.1 COG2175 Probable taurine catabolism dioxygenase YP_007231177.1 COG2199 FOG: GGDEF domain YP_007231178.1 COG3487 Uncharacterized iron-regulated protein YP_007231179.1 COG3488 Predicted thiol oxidoreductase YP_007231180.1 COG3489 Predicted periplasmic lipoprotein YP_007231181.1 COG3490 Uncharacterized protein conserved in bacteria YP_007231182.1 COG0845 Membrane-fusion protein YP_007231183.1 COG0841 Cation/multidrug efflux pump YP_007231186.1 COG0500 SAM-dependent methyltransferases YP_007231187.1 COG0642 Signal transduction histidine kinase YP_007231188.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007231189.1 COG3907 PAP2 (acid phosphatase) superfamily protein YP_007231190.1 COG0459 Chaperonin GroEL (HSP60 family) YP_007231191.1 COG0234 Co-chaperonin GroES (HSP10) YP_007231192.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_007231193.1 COG0748 Putative heme iron utilization protein YP_007231195.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase YP_007231196.1 COG0477 Permeases of the major facilitator superfamily YP_007231197.1 COG0477 Permeases of the major facilitator superfamily YP_007231198.1 COG0668 Small-conductance mechanosensitive channel YP_007231199.1 COG1666 Uncharacterized protein conserved in bacteria YP_007231200.1 COG1893 Ketopantoate reductase YP_007231201.1 COG0642 Signal transduction histidine kinase YP_007231202.1 COG2096 Uncharacterized conserved protein YP_007231203.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007231204.1 COG0625 Glutathione S-transferase YP_007231205.1 COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) YP_007231206.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_007231207.1 COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives YP_007231208.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_007231209.1 COG0206 Cell division GTPase YP_007231210.1 COG0849 Actin-like ATPase involved in cell division YP_007231211.1 COG1589 Cell division septal protein YP_007231212.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_007231213.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_007231214.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_007231215.1 COG0772 Bacterial cell division membrane protein YP_007231216.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_007231217.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_007231218.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_007231219.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_007231220.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_007231221.1 COG3116 Cell division protein YP_007231222.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_007231223.1 COG2001 Uncharacterized protein conserved in bacteria YP_007231224.1 COG0313 Predicted methyltransferases YP_007231225.1 COG3107 Putative lipoprotein YP_007231226.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_007231227.1 COG0279 Phosphoheptose isomerase YP_007231228.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_007231230.1 COG2969 Stringent starvation protein B YP_007231231.1 COG0625 Glutathione S-transferase YP_007231232.1 COG2857 Cytochrome c1 YP_007231233.1 COG1290 Cytochrome b subunit of the bc complex YP_007231234.1 COG0723 Rieske Fe-S protein YP_007231235.1 COG0103 Ribosomal protein S9 YP_007231236.1 COG0102 Ribosomal protein L13 YP_007231237.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_007231238.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007231239.1 COG1485 Predicted ATPase YP_007231240.1 COG0180 Tryptophanyl-tRNA synthetase YP_007231241.1 COG2945 Predicted hydrolase of the alpha/beta superfamily YP_007231242.1 COG3105 Uncharacterized protein conserved in bacteria YP_007231243.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_007231244.1 COG1522 Transcriptional regulators YP_007231247.1 COG2895 GTPases - Sulfate adenylate transferase subunit 1 YP_007231248.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_007231249.1 COG0327 Uncharacterized conserved protein YP_007231250.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_007231251.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_007231252.1 COG0765 ABC-type amino acid transport system, permease component YP_007231253.1 COG4597 ABC-type amino acid transport system, permease component YP_007231254.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007231255.1 COG0400 Predicted esterase YP_007231256.1 COG0513 Superfamily II DNA and RNA helicases YP_007231257.1 COG1977 Molybdopterin converting factor, small subunit YP_007231258.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_007231259.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_007231260.1 COG0726 Predicted xylanase/chitin deacetylase YP_007231261.1 COG3022 Uncharacterized protein conserved in bacteria YP_007231262.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_007231263.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_007231264.1 COG0845 Membrane-fusion protein YP_007231265.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_007231270.1 COG1696 Predicted membrane protein involved in D-alanine export YP_007231273.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_007231275.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007231276.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007231277.1 COG1538 Outer membrane protein YP_007231278.1 COG1566 Multidrug resistance efflux pump YP_007231279.1 COG0477 Permeases of the major facilitator superfamily YP_007231280.1 COG0583 Transcriptional regulator YP_007231281.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007231282.1 COG1566 Multidrug resistance efflux pump YP_007231284.1 COG1289 Predicted membrane protein YP_007231285.1 COG1538 Outer membrane protein YP_007231286.1 COG0583 Transcriptional regulator YP_007231287.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_007231289.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007231290.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007231291.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007231292.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_007231293.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_007231295.1 COG3182 Uncharacterized iron-regulated membrane protein YP_007231296.1 COG2733 Predicted membrane protein YP_007231299.1 COG3223 Predicted membrane protein YP_007231300.1 COG3141 Uncharacterized protein conserved in bacteria YP_007231301.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_007231302.1 COG2912 Uncharacterized conserved protein YP_007231303.1 COG0625 Glutathione S-transferase YP_007231304.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_007231305.1 COG3508 Homogentisate 1,2-dioxygenase YP_007231306.1 COG1414 Transcriptional regulator YP_007231307.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007231308.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007231309.1 COG1346 Putative effector of murein hydrolase YP_007231310.1 COG1380 Putative effector of murein hydrolase LrgA YP_007231311.1 COG0583 Transcriptional regulator YP_007231312.1 COG0716 Flavodoxins YP_007231313.1 COG2202 FOG: PAS/PAC domain YP_007231315.1 COG0789 Predicted transcriptional regulators YP_007231316.1 COG3224 Uncharacterized protein conserved in bacteria YP_007231317.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007231318.1 COG3492 Uncharacterized protein conserved in bacteria YP_007231320.1 COG4757 Predicted alpha/beta hydrolase YP_007231321.1 COG3007 Uncharacterized paraquat-inducible protein B YP_007231322.1 COG3658 Cytochrome b YP_007231323.1 COG5591 Uncharacterized conserved protein YP_007231324.1 COG0183 Acetyl-CoA acetyltransferase YP_007231325.1 COG0620 Methionine synthase II (cobalamin-independent) YP_007231326.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_007231327.1 COG0523 Putative GTPases (G3E family) YP_007231328.1 COG2879 Uncharacterized small protein YP_007231329.1 COG1966 Carbon starvation protein, predicted membrane protein YP_007231331.1 COG2233 Xanthine/uracil permeases YP_007231332.1 COG1066 Predicted ATP-dependent serine protease YP_007231333.1 COG1970 Large-conductance mechanosensitive channel YP_007231334.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_007231335.1 COG2771 DNA-binding HTH domain-containing proteins YP_007231336.1 COG2813 16S RNA G1207 methylase RsmC YP_007231338.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_007231339.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_007231340.1 COG0477 Permeases of the major facilitator superfamily YP_007231341.1 COG2252 Permeases YP_007231342.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_007231343.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_007231344.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_007231345.1 COG2321 Predicted metalloprotease YP_007231346.1 COG0840 Methyl-accepting chemotaxis protein YP_007231347.1 COG0405 Gamma-glutamyltransferase YP_007231348.1 COG0583 Transcriptional regulator YP_007231349.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_007231350.1 COG1359 Uncharacterized conserved protein YP_007231351.1 COG0730 Predicted permeases YP_007231352.1 COG0583 Transcriptional regulator YP_007231353.1 COG0558 Phosphatidylglycerophosphate synthase YP_007231354.1 COG2267 Lysophospholipase YP_007231355.1 COG0671 Membrane-associated phospholipid phosphatase YP_007231357.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_007231358.1 COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase YP_007231359.1 COG1937 Uncharacterized protein conserved in bacteria YP_007231360.1 COG1230 Co/Zn/Cd efflux system component YP_007231361.1 COG3450 Predicted enzyme of the cupin superfamily YP_007231362.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_007231365.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_007231366.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007231367.1 COG0583 Transcriptional regulator YP_007231368.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_007231369.1 COG2199 FOG: GGDEF domain YP_007231371.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_007231372.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_007231373.1 COG1330 Exonuclease V gamma subunit YP_007231374.1 COG2717 Predicted membrane protein YP_007231375.1 COG2041 Sulfite oxidase and related enzymes YP_007231376.1 COG1183 Phosphatidylserine synthase YP_007231377.1 COG0059 Ketol-acid reductoisomerase YP_007231378.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_007231379.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_007231380.1 COG3098 Uncharacterized protein conserved in bacteria YP_007231381.1 COG0457 FOG: TPR repeat YP_007231382.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_007231383.1 COG2187 Uncharacterized protein conserved in bacteria YP_007231384.1 COG3070 Regulator of competence-specific genes YP_007231385.1 COG3016 Uncharacterized iron-regulated protein YP_007231386.1 COG4559 ABC-type hemin transport system, ATPase component YP_007231387.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_007231388.1 COG4558 ABC-type hemin transport system, periplasmic component YP_007231389.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_007231390.1 COG1489 DNA-binding protein, stimulates sugar fermentation YP_007231391.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_007231392.1 COG1734 DnaK suppressor protein YP_007231393.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_007231395.1 COG0591 Na+/proline symporter YP_007231396.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007231397.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_007231398.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_007231399.1 COG0413 Ketopantoate hydroxymethyltransferase YP_007231400.1 COG0414 Panthothenate synthetase YP_007231401.1 COG0166 Glucose-6-phosphate isomerase YP_007231402.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_007231403.1 COG3662 Uncharacterized protein conserved in bacteria YP_007231405.1 COG0346 Lactoylglutathione lyase and related lyases YP_007231406.1 COG1359 Uncharacterized conserved protein YP_007231407.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_007231408.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_007231409.1 COG0184 Ribosomal protein S15P/S13E YP_007231410.1 COG0130 Pseudouridine synthase YP_007231411.1 COG0858 Ribosome-binding factor A YP_007231412.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_007231413.1 COG0195 Transcription elongation factor YP_007231414.1 COG0779 Uncharacterized protein conserved in bacteria YP_007231415.1 COG1314 Preprotein translocase subunit SecG YP_007231416.1 COG0149 Triosephosphate isomerase YP_007231417.1 COG1109 Phosphomannomutase YP_007231418.1 COG0294 Dihydropteroate synthase and related enzymes YP_007231419.1 COG0465 ATP-dependent Zn proteases YP_007231420.1 COG0293 23S rRNA methylase YP_007231421.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_007231423.1 COG0782 Transcription elongation factor YP_007231424.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_007231425.1 COG0505 Carbamoylphosphate synthase small subunit YP_007231426.1 COG0289 Dihydrodipicolinate reductase YP_007231427.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_007231428.1 COG0443 Molecular chaperone YP_007231429.1 COG1070 Sugar (pentulose and hexulose) kinases YP_007231430.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_007231431.1 COG0497 ATPase involved in DNA repair YP_007231432.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_007231433.1 COG2913 Small protein A (tmRNA-binding) YP_007231434.1 COG2867 Oligoketide cyclase/lipid transport protein YP_007231435.1 COG0691 tmRNA-binding protein YP_007231436.1 COG2186 Transcriptional regulators YP_007231437.1 COG1620 L-lactate permease YP_007231438.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_007231439.1 COG0277 FAD/FMN-containing dehydrogenases YP_007231442.1 COG0582 Integrase YP_007231445.1 COG5377 Phage-related protein, predicted endonuclease YP_007231447.1 COG2003 DNA repair proteins YP_007231450.1 COG1483 Predicted ATPase (AAA+ superfamily) YP_007231451.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_007231452.1 COG0514 Superfamily II DNA helicase YP_007231453.1 COG1743 Adenine-specific DNA methylase containing a Zn-ribbon YP_007231457.1 COG3950 Predicted ATP-binding protein involved in virulence YP_007231458.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_007231460.1 COG2378 Predicted transcriptional regulator YP_007231462.1 COG2378 Predicted transcriptional regulator YP_007231466.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_007231468.1 COG1479 Uncharacterized conserved protein YP_007231470.1 COG3311 Predicted transcriptional regulator YP_007231472.1 COG0582 Integrase YP_007231473.1 COG0477 Permeases of the major facilitator superfamily YP_007231474.1 COG0583 Transcriptional regulator YP_007231475.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007231476.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_007231477.1 COG0477 Permeases of the major facilitator superfamily YP_007231478.1 COG2186 Transcriptional regulators YP_007231479.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_007231480.1 COG0546 Predicted phosphatases YP_007231481.1 COG1946 Acyl-CoA thioesterase YP_007231482.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_007231483.1 COG2062 Phosphohistidine phosphatase SixA YP_007231484.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_007231485.1 COG2081 Predicted flavoproteins YP_007231486.1 COG0513 Superfamily II DNA and RNA helicases YP_007231487.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007231488.1 COG1522 Transcriptional regulators YP_007231489.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_007231490.1 COG1432 Uncharacterized conserved protein YP_007231491.1 COG3416 Uncharacterized protein conserved in bacteria YP_007231493.1 COG1643 HrpA-like helicases YP_007231494.1 COG1643 HrpA-like helicases YP_007231495.1 COG0477 Permeases of the major facilitator superfamily YP_007231496.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_007231497.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_007231498.1 COG1522 Transcriptional regulators YP_007231500.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_007231501.1 COG0775 Nucleoside phosphorylase YP_007231502.1 COG1960 Acyl-CoA dehydrogenases YP_007231503.1 COG0642 Signal transduction histidine kinase YP_007231504.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_007231505.1 COG0352 Thiamine monophosphate synthase YP_007231506.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_007231507.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_007231508.1 COG4517 Uncharacterized protein conserved in bacteria YP_007231509.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_007231510.1 COG0319 Predicted metal-dependent hydrolase YP_007231511.1 COG4535 Putative Mg2+ and Co2+ transporter CorC YP_007231512.1 COG0815 Apolipoprotein N-acyltransferase YP_007231513.1 COG1434 Uncharacterized conserved protein YP_007231515.1 COG0495 Leucyl-tRNA synthetase YP_007231516.1 COG2980 Rare lipoprotein B YP_007231517.1 COG1466 DNA polymerase III, delta subunit YP_007231518.1 COG3036 Uncharacterized protein conserved in bacteria YP_007231519.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_007231520.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_007231521.1 COG0320 Lipoate synthase YP_007231522.1 COG0321 Lipoate-protein ligase B YP_007231523.1 COG2921 Uncharacterized conserved protein YP_007231524.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_007231525.1 COG0797 Lipoproteins YP_007231526.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_007231527.1 COG0772 Bacterial cell division membrane protein YP_007231528.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_007231529.1 COG1576 Uncharacterized conserved protein YP_007231530.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_007231531.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_007231532.1 COG0014 Gamma-glutamyl phosphate reductase YP_007231533.1 COG2094 3-methyladenine DNA glycosylase YP_007231534.1 COG0586 Uncharacterized membrane-associated protein YP_007231535.1 COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease YP_007231536.1 COG1346 Putative effector of murein hydrolase YP_007231538.1 COG2030 Acyl dehydratase YP_007231539.1 COG2264 Ribosomal protein L11 methylase YP_007231541.1 COG0042 tRNA-dihydrouridine synthase YP_007231542.1 COG2901 Factor for inversion stimulation Fis, transcriptional activator YP_007231543.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_007231544.1 COG0151 Phosphoribosylamine-glycine ligase YP_007231545.1 COG0642 Signal transduction histidine kinase YP_007231546.1 COG2095 Multiple antibiotic transporter YP_007231549.1 COG2073 Cobalamin biosynthesis protein CbiG YP_007231550.1 COG2243 Precorrin-2 methylase YP_007231551.1 COG2082 Precorrin isomerase YP_007231552.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_007231553.1 COG2241 Precorrin-6B methylase 1 YP_007231554.1 COG1903 Cobalamin biosynthesis protein CbiD YP_007231555.1 COG2099 Precorrin-6x reductase YP_007231556.1 COG1585 Membrane protein implicated in regulation of membrane protease activity YP_007231557.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_007231559.1 COG2847 Uncharacterized protein conserved in bacteria YP_007231561.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_007231562.1 COG3182 Uncharacterized iron-regulated membrane protein YP_007231563.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007231564.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_007231565.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_007231566.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_007231567.1 COG4674 Uncharacterized ABC-type transport system, ATPase component YP_007231568.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_007231569.1 COG1247 Sortase and related acyltransferases YP_007231571.1 COG2214 DnaJ-class molecular chaperone YP_007231572.1 COG0443 Molecular chaperone YP_007231575.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007231576.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007231577.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_007231579.1 COG2193 Bacterioferritin (cytochrome b1) YP_007231580.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_007231581.1 COG0840 Methyl-accepting chemotaxis protein YP_007231582.1 COG1309 Transcriptional regulator YP_007231583.1 COG2942 N-acyl-D-glucosamine 2-epimerase YP_007231584.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_007231585.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_007231586.1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component YP_007231587.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_007231588.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_007231589.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_007231590.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_007231591.1 COG0171 NAD synthase YP_007231592.1 COG3241 Azurin YP_007231593.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_007231594.1 COG1032 Fe-S oxidoreductase YP_007231595.1 COG0305 Replicative DNA helicase YP_007231596.1 COG0359 Ribosomal protein L9 YP_007231598.1 COG0238 Ribosomal protein S18 YP_007231599.1 COG0360 Ribosomal protein S6 YP_007231600.1 COG0566 rRNA methylases YP_007231601.1 COG0557 Exoribonuclease R YP_007231602.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_007231603.1 COG1178 ABC-type Fe3+ transport system, permease component YP_007231604.1 COG0670 Integral membrane protein, interacts with FtsH YP_007231607.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_007231608.1 COG0840 Methyl-accepting chemotaxis protein YP_007231611.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_007231613.1 COG0840 Methyl-accepting chemotaxis protein YP_007231614.1 COG0104 Adenylosuccinate synthase YP_007231615.1 COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis YP_007231616.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_007231617.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_007231618.1 COG2262 GTPases YP_007231619.1 COG1923 Uncharacterized host factor I protein YP_007231620.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_007231621.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_007231622.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_007231623.1 COG0802 Predicted ATPase or kinase YP_007231624.1 COG0063 Predicted sugar kinase YP_007231625.1 COG1600 Uncharacterized Fe-S protein YP_007231626.1 COG2860 Predicted membrane protein YP_007231627.1 COG1949 Oligoribonuclease (3'->5' exoribonuclease) YP_007231628.1 COG1162 Predicted GTPases YP_007231629.1 COG1360 Flagellar motor protein YP_007231630.1 COG1291 Flagellar motor component YP_007231632.1 COG2897 Rhodanese-related sulfurtransferase YP_007231633.1 COG0688 Phosphatidylserine decarboxylase YP_007231634.1 COG3830 ACT domain-containing protein YP_007231636.1 COG3009 Uncharacterized protein conserved in bacteria YP_007231637.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_007231638.1 COG3577 Predicted aspartyl protease YP_007231640.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_007231641.1 COG3150 Predicted esterase YP_007231642.1 COG1409 Predicted phosphohydrolases YP_007231643.1 COG3151 Uncharacterized protein conserved in bacteria YP_007231644.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007231646.1 COG1457 Purine-cytosine permease and related proteins YP_007231647.1 COG0422 Thiamine biosynthesis protein ThiC YP_007231648.1 COG1538 Outer membrane protein YP_007231649.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_007231650.1 COG0583 Transcriptional regulator YP_007231651.1 COG2076 Membrane transporters of cations and cationic drugs YP_007231652.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_007231653.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_007231655.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_007231656.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_007231657.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_007231658.1 COG0515 Serine/threonine protein kinase YP_007231659.1 COG0438 Glycosyltransferase YP_007231660.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_007231661.1 COG0438 Glycosyltransferase YP_007231662.1 COG2120 Uncharacterized proteins, LmbE homologs YP_007231664.1 COG0438 Glycosyltransferase YP_007231665.1 COG2192 Predicted carbamoyl transferase, NodU family YP_007231666.1 COG2961 Protein involved in catabolism of external DNA YP_007231667.1 COG0591 Na+/proline symporter YP_007231668.1 COG0506 Proline dehydrogenase YP_007231672.1 COG1960 Acyl-CoA dehydrogenases YP_007231673.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_007231674.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_007231675.1 COG0477 Permeases of the major facilitator superfamily YP_007231676.1 COG0513 Superfamily II DNA and RNA helicases YP_007231677.1 COG2081 Predicted flavoproteins YP_007231678.1 COG1289 Predicted membrane protein YP_007231679.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007231680.1 COG2153 Predicted acyltransferase YP_007231681.1 COG4519 Uncharacterized protein conserved in bacteria YP_007231682.1 COG1451 Predicted metal-dependent hydrolase YP_007231683.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_007231684.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_007231687.1 COG0126 3-phosphoglycerate kinase YP_007231688.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_007231689.1 COG0021 Transketolase YP_007231690.1 COG0640 Predicted transcriptional regulators YP_007231691.1 COG0192 S-adenosylmethionine synthetase YP_007231692.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_007231694.1 COG3909 Cytochrome c556 YP_007231695.1 COG2821 Membrane-bound lytic murein transglycosylase YP_007231696.1 COG3686 Predicted membrane protein YP_007231697.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007231699.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_007231700.1 COG1607 Acyl-CoA hydrolase YP_007231701.1 COG0499 S-adenosylhomocysteine hydrolase YP_007231702.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_007231704.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007231705.1 COG0513 Superfamily II DNA and RNA helicases YP_007231706.1 COG2353 Uncharacterized conserved protein YP_007231707.1 COG3038 Cytochrome B561 YP_007231708.1 COG1231 Monoamine oxidase YP_007231709.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_007231710.1 COG1385 Uncharacterized protein conserved in bacteria YP_007231711.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_007231712.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_007231713.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_007231714.1 COG0840 Methyl-accepting chemotaxis protein YP_007231715.1 COG0835 Chemotaxis signal transduction protein YP_007231716.1 COG0784 FOG: CheY-like receiver YP_007231717.1 COG0784 FOG: CheY-like receiver YP_007231718.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_007231719.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_007231720.1 COG1678 Putative transcriptional regulator YP_007231721.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_007231722.1 COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase YP_007231723.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_007231724.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_007231725.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_007231726.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_007231727.1 COG3536 Uncharacterized protein conserved in bacteria YP_007231728.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_007231729.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007231730.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_007231731.1 COG1309 Transcriptional regulator YP_007231733.1 COG3937 Uncharacterized conserved protein YP_007231735.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_007231736.1 COG3165 Uncharacterized protein conserved in bacteria YP_007231737.1 COG0661 Predicted unusual protein kinase YP_007231738.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_007231739.1 COG0140 Phosphoribosyl-ATP pyrophosphohydrolase YP_007231740.1 COG1826 Sec-independent protein secretion pathway components YP_007231741.1 COG1826 Sec-independent protein secretion pathway components YP_007231742.1 COG0805 Sec-independent protein secretion pathway component TatC YP_007231743.1 COG1385 Uncharacterized protein conserved in bacteria YP_007231744.1 COG0840 Methyl-accepting chemotaxis protein YP_007231745.1 COG0840 Methyl-accepting chemotaxis protein YP_007231746.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_007231747.1 COG0765 ABC-type amino acid transport system, permease component YP_007231748.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007231749.1 COG2943 Membrane glycosyltransferase YP_007231750.1 COG3131 Periplasmic glucans biosynthesis protein YP_007231751.1 COG1490 D-Tyr-tRNAtyr deacylase YP_007231752.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007231753.1 COG4886 Leucine-rich repeat (LRR) protein YP_007231754.1 COG3741 N-formylglutamate amidohydrolase YP_007231755.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_007231756.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_007231757.1 COG2986 Histidine ammonia-lyase YP_007231758.1 COG2987 Urocanate hydratase YP_007231759.1 COG3758 Uncharacterized protein conserved in bacteria YP_007231760.1 COG2188 Transcriptional regulators YP_007231761.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_007231762.1 COG3040 Bacterial lipocalin YP_007231764.1 COG3803 Uncharacterized protein conserved in bacteria YP_007231765.1 COG0158 Fructose-1,6-bisphosphatase YP_007231766.1 COG0058 Glucan phosphorylase YP_007231767.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_007231768.1 COG4287 PhoPQ-activated pathogenicity-related protein YP_007231772.1 COG1217 Predicted membrane GTPase involved in stress response YP_007231773.1 COG0301 Thiamine biosynthesis ATP pyrophosphatase YP_007231774.1 COG0174 Glutamine synthetase YP_007231775.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_007231776.1 COG3852 Signal transduction histidine kinase, nitrogen specific YP_007231777.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_007231779.1 COG0219 Predicted rRNA methylase (SpoU class) YP_007231780.1 COG1952 Preprotein translocase subunit SecB YP_007231781.1 COG0695 Glutaredoxin and related proteins YP_007231782.1 COG0607 Rhodanese-related sulfurtransferase YP_007231783.1 COG0696 Phosphoglyceromutase YP_007231784.1 COG4942 Membrane-bound metallopeptidase YP_007231785.1 COG0793 Periplasmic protease YP_007231786.1 COG2861 Uncharacterized protein conserved in bacteria YP_007231788.1 COG1292 Choline-glycine betaine transporter YP_007231789.1 COG1309 Transcriptional regulator YP_007231790.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007231791.1 COG2303 Choline dehydrogenase and related flavoproteins YP_007231792.1 COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain YP_007231793.1 COG3264 Small-conductance mechanosensitive channel YP_007231794.1 COG0397 Uncharacterized conserved protein YP_007231795.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_007231796.1 COG1192 ATPases involved in chromosome partitioning YP_007231797.1 COG0583 Transcriptional regulator YP_007231798.1 COG0477 Permeases of the major facilitator superfamily YP_007231799.1 COG3111 Uncharacterized conserved protein YP_007231800.1 COG0407 Uroporphyrinogen-III decarboxylase YP_007231801.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_007231802.1 COG0067 Glutamate synthase domain 1 YP_007231803.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_007231804.1 COG0337 3-dehydroquinate synthetase YP_007231805.1 COG0703 Shikimate kinase YP_007231806.1 COG4796 Type II secretory pathway, component HofQ YP_007231807.1 COG3167 Tfp pilus assembly protein PilO YP_007231808.1 COG3166 Tfp pilus assembly protein PilN YP_007231809.1 COG4972 Tfp pilus assembly protein, ATPase PilM YP_007231810.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_007231811.1 COG0281 Malic enzyme YP_007231812.1 COG1525 Micrococcal nuclease (thermonuclease) homologs YP_007231813.1 COG0254 Ribosomal protein L31 YP_007231814.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_007231815.1 COG0018 Arginyl-tRNA synthetase YP_007231816.1 COG3087 Cell division protein YP_007231817.1 COG2314 Predicted membrane protein YP_007231818.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_007231819.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_007231820.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_007231821.1 COG0345 Pyrroline-5-carboxylate reductase YP_007231822.1 COG0762 Predicted integral membrane protein YP_007231823.1 COG2021 Homoserine acetyltransferase YP_007231824.1 COG0500 SAM-dependent methyltransferases YP_007231826.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_007231827.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_007231829.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_007231830.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_007231831.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_007231832.1 COG2363 Uncharacterized small membrane protein YP_007231833.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_007231834.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_007231835.1 COG2177 Cell division protein YP_007231836.1 COG2884 Predicted ATPase involved in cell division YP_007231837.1 COG0552 Signal recognition particle GTPase YP_007231838.1 COG0612 Predicted Zn-dependent peptidases YP_007231839.1 COG0612 Predicted Zn-dependent peptidases YP_007231840.1 COG0742 N6-adenine-specific methylase YP_007231841.1 COG0612 Predicted Zn-dependent peptidases YP_007231842.1 COG0612 Predicted Zn-dependent peptidases YP_007231843.1 COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold YP_007231844.1 COG2897 Rhodanese-related sulfurtransferase YP_007231845.1 COG1309 Transcriptional regulator YP_007231846.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007231848.1 COG2303 Choline dehydrogenase and related flavoproteins YP_007231849.1 COG0669 Phosphopantetheine adenylyltransferase YP_007231850.1 COG1145 Ferredoxin YP_007231851.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_007231852.1 COG1639 Predicted signal transduction protein YP_007231853.1 COG0693 Putative intracellular protease/amidase YP_007231854.1 COG1092 Predicted SAM-dependent methyltransferases YP_007231855.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_007231856.1 COG0583 Transcriptional regulator YP_007231857.1 COG1182 Acyl carrier protein phosphodiesterase YP_007231859.1 COG1823 Predicted Na+/dicarboxylate symporter YP_007231860.1 COG0262 Dihydrofolate reductase YP_007231862.1 COG0486 Predicted GTPase YP_007231863.1 COG4341 Predicted HD phosphohydrolase YP_007231864.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_007231865.1 COG1178 ABC-type Fe3+ transport system, permease component YP_007231866.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_007231867.1 COG0583 Transcriptional regulator YP_007231868.1 COG2217 Cation transport ATPase YP_007231869.1 COG0789 Predicted transcriptional regulators YP_007231870.1 COG0207 Thymidylate synthase YP_007231871.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_007231872.1 COG0730 Predicted permeases YP_007231873.1 COG3332 Uncharacterized conserved protein YP_007231874.1 COG3605 Signal transduction protein containing GAF and PtsI domains YP_007231875.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_007231876.1 COG0560 Phosphoserine phosphatase YP_007231877.1 COG5528 Predicted integral membrane protein YP_007231878.1 COG1171 Threonine dehydratase YP_007231879.1 COG0120 Ribose 5-phosphate isomerase YP_007231880.1 COG3204 Uncharacterized protein conserved in bacteria YP_007231881.1 COG3204 Uncharacterized protein conserved in bacteria YP_007231882.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_007231883.1 COG0277 FAD/FMN-containing dehydrogenases YP_007231884.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_007231886.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007231887.1 COG1683 Uncharacterized conserved protein YP_007231888.1 COG3751 Predicted proline hydroxylase YP_007231890.1 COG2267 Lysophospholipase YP_007231892.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_007231893.1 COG2366 Protein related to penicillin acylase YP_007231894.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007231895.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_007231896.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_007231897.1 COG0765 ABC-type amino acid transport system, permease component YP_007231898.1 COG0765 ABC-type amino acid transport system, permease component YP_007231899.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_007231900.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain YP_007231901.1 COG3545 Predicted esterase of the alpha/beta hydrolase fold YP_007231902.1 COG0848 Biopolymer transport protein YP_007231903.1 COG0811 Biopolymer transport proteins YP_007231904.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_007231905.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_007231906.1 COG4208 ABC-type sulfate transport system, permease component YP_007231907.1 COG0555 ABC-type sulfate transport system, permease component YP_007231908.1 COG1613 ABC-type sulfate transport system, periplasmic component YP_007231909.1 COG5583 Uncharacterized small protein YP_007231910.1 COG0841 Cation/multidrug efflux pump YP_007231911.1 COG0845 Membrane-fusion protein YP_007231912.1 COG0845 Membrane-fusion protein YP_007231914.1 COG1943 Transposase and inactivated derivatives YP_007231915.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_007231916.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_007231917.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_007231918.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007231919.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007231920.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_007231921.1 COG0174 Glutamine synthetase YP_007231923.1 COG0174 Glutamine synthetase YP_007231924.1 COG0548 Acetylglutamate kinase YP_007231925.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_007231926.1 COG3025 Uncharacterized conserved protein YP_007231927.1 COG1522 Transcriptional regulators YP_007231929.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_007231931.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_007231932.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_007231933.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_007231934.1 COG1178 ABC-type Fe3+ transport system, permease component YP_007231935.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_007231936.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_007231938.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_007231939.1 COG0006 Xaa-Pro aminopeptidase YP_007231940.1 COG3079 Uncharacterized protein conserved in bacteria YP_007231942.1 COG3027 Uncharacterized protein conserved in bacteria YP_007231943.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_007231945.1 COG2947 Uncharacterized conserved protein YP_007231946.1 COG0845 Membrane-fusion protein YP_007231947.1 COG1131 ABC-type multidrug transport system, ATPase component YP_007231948.1 COG0842 ABC-type multidrug transport system, permease component YP_007231949.1 COG3692 Uncharacterized protein conserved in bacteria YP_007231950.1 COG1580 Flagellar basal body-associated protein YP_007231951.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_007231952.1 COG3703 Uncharacterized protein involved in cation transport YP_007231953.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_007231954.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_007231955.1 COG1158 Transcription termination factor YP_007231956.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_007231957.1 COG0248 Exopolyphosphatase YP_007231958.1 COG0855 Polyphosphate kinase YP_007231959.1 COG0586 Uncharacterized membrane-associated protein YP_007231960.1 COG3000 Sterol desaturase YP_007231961.1 COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis YP_007231962.1 COG1671 Uncharacterized protein conserved in bacteria YP_007231963.1 COG3072 Adenylate cyclase YP_007231964.1 COG0782 Transcription elongation factor YP_007231965.1 COG3313 Predicted Fe-S protein YP_007231966.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_007231968.1 COG0019 Diaminopimelate decarboxylase YP_007231969.1 COG0253 Diaminopimelate epimerase YP_007231970.1 COG3159 Uncharacterized protein conserved in bacteria YP_007231971.1 COG4973 Site-specific recombinase XerC YP_007231972.1 COG1011 Predicted hydrolase (HAD superfamily) YP_007231974.1 COG0004 Ammonia permease YP_007231975.1 COG0347 Nitrogen regulatory protein PII YP_007231976.1 COG2960 Uncharacterized protein conserved in bacteria YP_007231978.1 COG0606 Predicted ATPase with chaperone activity YP_007231990.1 COG0207 Thymidylate synthase YP_007231991.1 COG4870 Cysteine protease YP_007231992.1 COG2856 Predicted Zn peptidase YP_007231993.1 COG1396 Predicted transcriptional regulators YP_007231995.1 COG0583 Transcriptional regulator YP_007231996.1 COG1538 Outer membrane protein YP_007231997.1 COG0841 Cation/multidrug efflux pump YP_007231998.1 COG0845 Membrane-fusion protein YP_007231999.1 COG1414 Transcriptional regulator YP_007232000.1 COG1309 Transcriptional regulator YP_007232001.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_007232002.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_007232004.1 COG0477 Permeases of the major facilitator superfamily YP_007232005.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_007232006.1 COG4569 Acetaldehyde dehydrogenase (acetylating) YP_007232007.1 COG3971 2-keto-4-pentenoate hydratase YP_007232008.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007232010.1 COG1802 Transcriptional regulators YP_007232011.1 COG4313 Protein involved in meta-pathway of phenol degradation YP_007232012.1 COG0662 Mannose-6-phosphate isomerase YP_007232013.1 COG1064 Zn-dependent alcohol dehydrogenases YP_007232017.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_007232018.1 COG2801 Transposase and inactivated derivatives YP_007232020.1 COG0606 Predicted ATPase with chaperone activity YP_007232021.1 COG4566 Response regulator YP_007232022.1 COG3710 DNA-binding winged-HTH domains YP_007232023.1 COG0515 Serine/threonine protein kinase YP_007232024.1 COG1335 Amidases related to nicotinamidase YP_007232025.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007232026.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_007232027.1 COG0475 Kef-type K+ transport systems, membrane components YP_007232029.1 COG1335 Amidases related to nicotinamidase YP_007232030.1 COG0583 Transcriptional regulator YP_007232032.1 COG0477 Permeases of the major facilitator superfamily YP_007232033.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_007232034.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_007232035.1 COG3224 Uncharacterized protein conserved in bacteria YP_007232036.1 COG1335 Amidases related to nicotinamidase YP_007232037.1 COG0668 Small-conductance mechanosensitive channel YP_007232038.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007232039.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007232040.1 COG0583 Transcriptional regulator YP_007232041.1 COG5383 Uncharacterized protein conserved in bacteria YP_007232042.1 COG0583 Transcriptional regulator YP_007232043.1 COG0534 Na+-driven multidrug efflux pump YP_007232044.1 COG2199 FOG: GGDEF domain YP_007232045.1 COG0210 Superfamily I DNA and RNA helicases YP_007232046.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_007232047.1 COG0427 Acetyl-CoA hydrolase YP_007232048.1 COG3245 Cytochrome c5 YP_007232049.1 COG1396 Predicted transcriptional regulators YP_007232050.1 COG0787 Alanine racemase YP_007232051.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007232052.1 COG1522 Transcriptional regulators YP_007232053.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_007232054.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_007232056.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_007232057.1 COG0477 Permeases of the major facilitator superfamily YP_007232058.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_007232059.1 COG3450 Predicted enzyme of the cupin superfamily YP_007232060.1 COG0267 Ribosomal protein L33 YP_007232061.1 COG0227 Ribosomal protein L28 YP_007232062.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_007232063.1 COG2003 DNA repair proteins YP_007232064.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_007232065.1 COG0756 dUTPase YP_007232066.1 COG1109 Phosphomannomutase YP_007232067.1 COG0548 Acetylglutamate kinase YP_007232068.1 COG0461 Orotate phosphoribosyltransferase YP_007232069.1 COG0708 Exonuclease III YP_007232070.1 COG3296 Uncharacterized protein conserved in bacteria YP_007232071.1 COG0689 RNase PH YP_007232072.1 COG1561 Uncharacterized stress-induced protein YP_007232073.1 COG0194 Guanylate kinase YP_007232074.1 COG0531 Amino acid transporters YP_007232075.1 COG2071 Predicted glutamine amidotransferases YP_007232076.1 COG0174 Glutamine synthetase YP_007232077.1 COG0583 Transcriptional regulator YP_007232078.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_007232079.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_007232080.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_007232082.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_007232083.1 COG0811 Biopolymer transport proteins YP_007232084.1 COG0848 Biopolymer transport protein YP_007232085.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_007232086.1 COG0583 Transcriptional regulator YP_007232087.1 COG1200 RecG-like helicase YP_007232088.1 COG2606 Uncharacterized conserved protein YP_007232090.1 COG0776 Bacterial nucleoid DNA-binding protein YP_007232091.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_007232092.1 COG1773 Rubredoxin YP_007232093.1 COG3161 4-hydroxybenzoate synthetase (chorismate lyase) YP_007232094.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_007232095.1 COG4315 Uncharacterized protein conserved in bacteria YP_007232096.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_007232097.1 COG0642 Signal transduction histidine kinase YP_007232098.1 COG1253 Hemolysins and related proteins containing CBS domains YP_007232099.1 COG0739 Membrane proteins related to metalloendopeptidases YP_007232100.1 COG0784 FOG: CheY-like receiver YP_007232101.1 COG0704 Phosphate uptake regulator YP_007232102.1 COG1117 ABC-type phosphate transport system, ATPase component YP_007232103.1 COG4985 ABC-type phosphate transport system, auxiliary component YP_007232104.1 COG4590 ABC-type uncharacterized transport system, permease component YP_007232105.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_007232106.1 COG0477 Permeases of the major facilitator superfamily YP_007232107.1 COG1607 Acyl-CoA hydrolase YP_007232108.1 COG0676 Uncharacterized enzymes related to aldose 1-epimerase YP_007232109.1 COG3495 Uncharacterized protein conserved in bacteria YP_007232110.1 COG2261 Predicted membrane protein YP_007232111.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_007232112.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_007232114.1 COG0583 Transcriptional regulator YP_007232115.1 COG1027 Aspartate ammonia-lyase YP_007232116.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_007232117.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_007232118.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_007232119.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_007232120.1 COG2808 Transcriptional regulator YP_007232121.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007232122.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_007232123.1 COG5016 Pyruvate/oxaloacetate carboxyltransferase YP_007232124.1 COG0439 Biotin carboxylase YP_007232125.1 COG0583 Transcriptional regulator YP_007232126.1 COG1737 Transcriptional regulators YP_007232127.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_007232129.1 COG0210 Superfamily I DNA and RNA helicases YP_007232130.1 COG4395 Uncharacterized protein conserved in bacteria YP_007232132.1 COG0475 Kef-type K+ transport systems, membrane components YP_007232133.1 COG1607 Acyl-CoA hydrolase YP_007232134.1 COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase YP_007232136.1 COG0523 Putative GTPases (G3E family) YP_007232138.1 COG0523 Putative GTPases (G3E family) YP_007232139.1 COG1469 Uncharacterized conserved protein YP_007232141.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_007232142.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_007232143.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_007232144.1 COG1131 ABC-type multidrug transport system, ATPase component YP_007232145.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_007232146.1 COG3192 Ethanolamine utilization protein YP_007232147.1 COG3204 Uncharacterized protein conserved in bacteria YP_007232148.1 COG1734 DnaK suppressor protein YP_007232149.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007232150.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_007232151.1 COG2200 FOG: EAL domain YP_007232153.1 COG0789 Predicted transcriptional regulators YP_007232154.1 COG0582 Integrase YP_007232156.1 COG3316 Transposase and inactivated derivatives YP_007232157.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007232158.1 COG0294 Dihydropteroate synthase and related enzymes YP_007232159.1 COG0582 Integrase YP_007232161.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_007232162.1 COG1309 Transcriptional regulator YP_007232163.1 COG0477 Permeases of the major facilitator superfamily YP_007232164.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_007232166.1 COG0294 Dihydropteroate synthase and related enzymes YP_007232167.1 COG3570 Streptomycin 6-kinase YP_007232168.1 COG3231 Aminoglycoside phosphotransferase YP_007232169.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_007232170.1 COG3316 Transposase and inactivated derivatives YP_007232171.1 COG3231 Aminoglycoside phosphotransferase YP_007232172.1 COG3316 Transposase and inactivated derivatives YP_007232175.1 COG5606 Uncharacterized conserved small protein YP_007232176.1 COG4679 Phage-related protein YP_007232177.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_007232178.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_007232183.1 COG2801 Transposase and inactivated derivatives YP_007232184.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_007232185.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_007232186.1 COG0294 Dihydropteroate synthase and related enzymes YP_007232187.1 COG2076 Membrane transporters of cations and cationic drugs YP_007232188.1 COG0477 Permeases of the major facilitator superfamily YP_007232189.1 COG1708 Predicted nucleotidyltransferases YP_007232190.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_007232191.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_007232192.1 COG0582 Integrase YP_007232196.1 COG2002 Regulators of stationary/sporulation gene expression YP_007232197.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_007232199.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_007232200.1 COG5534 Plasmid replication initiator protein YP_007232204.1 COG1430 Uncharacterized conserved protein YP_007232205.1 COG4456 Virulence-associated protein and related proteins YP_007232206.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_007232221.1 COG0433 Predicted ATPase YP_007232222.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_007232226.1 COG5606 Uncharacterized conserved small protein YP_007232227.1 COG4679 Phage-related protein YP_007232228.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_007232229.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_007232230.1 COG2367 Beta-lactamase class A YP_007232231.1 COG0789 Predicted transcriptional regulators YP_007232233.1 COG2608 Copper chaperone YP_007232234.1 COG2217 Cation transport ATPase YP_007232235.1 COG0789 Predicted transcriptional regulators YP_007232237.1 COG2200 FOG: EAL domain YP_007232238.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_007232239.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_007232240.1 COG1734 DnaK suppressor protein YP_007232241.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_007232242.1 COG0582 Integrase YP_007232244.1 COG2076 Membrane transporters of cations and cationic drugs YP_007232245.1 COG3547 Transposase and inactivated derivatives YP_007232246.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_007232247.1 COG4644 Transposase and inactivated derivatives, TnpA family